HHsearch alignment of GI: 254780779 and MMDB domain: 3bch_A_
>3bch_A (A:) 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=100.00 E-value=0 Score=470.44 Aligned_cols=192 Identities=20% Similarity=0.315 Sum_probs=179.4
Q ss_pred CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
Q ss_conf 9866245899986088607547765788562102001-881675389999999999999998610788169960782357
Q gi|254780779|r 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 (278)
Q Consensus 1 m~m~~~t~~~Ll~ag~H~Gh~~~~wnPkM~~yI~g~r-ngihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~ 79 (278)
|+|+.+++++||+||+||||++ |||+|+|||||.| ||+|||||++|+.+|++|++|++.+ .++|.||||||+++++
T Consensus 41 ~~~~~~~i~~Ll~ag~H~Gh~~--wnp~m~~yIyg~R~~gi~IidL~~T~~~L~~A~~~i~~i-~~~~~iLfV~tk~~~~ 117 (253)
T 3bch_A 41 LQMKEEDVLKFLAAGTHLGGTN--LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAI-ENPADVSVISSRNTGQ 117 (253)
T ss_dssp -CCCHHHHHHHHHHTTTBCCSC--CCGGGGGGEEEECTTSCEEECHHHHHHHHHHHHHHHHTC-SSGGGEEEEECSHHHH
T ss_pred CCCCHHHHHHHHHHCEEECCCC--CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH-CCCCCEEEEECCHHHH
T ss_conf 2578899999997286307677--796640403273789859966999999999999999984-2899689997547889
Q ss_pred HHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999986339831423345873234266655567789988763012126774678876655677764344332211359
Q gi|254780779|r 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 (278)
Q Consensus 80 ~~i~~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~~~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP 159 (278)
.+|+++|++||++||++||+|||||||.+++.+ .|
T Consensus 118 ~~I~~~a~~~~~~~v~~rWigG~LTN~~~~~~~---------------------------------------------~P 152 (253)
T 3bch_A 118 RAVLKFAAATGATPIAGRFTPGTFTNQIQAAFR---------------------------------------------EP 152 (253)
T ss_dssp HHHHHHHHHHCCEEEESCCCTTTTTCCSCSTTC---------------------------------------------SC
T ss_pred HHHHHHHHHHCCCEECCCCCCCCCCCCHHHCCC---------------------------------------------CC
T ss_conf 999999998189213145568742652010344---------------------------------------------66
Q ss_pred CEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 57999438877123212343398145403677670011520321577268999999999999999999744310111101
Q gi|254780779|r 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 (278)
Q Consensus 160 ~~iiv~d~~~e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~~~~~~~~~~~~~ 239 (278)
+++||+||..+++||+||.++||||||||||||||++|||||||||||++||+|++++|++||++|++.+......+...
T Consensus 153 ~liii~d~~~~~~ai~Ea~kl~IPvI~ivDTn~~p~~idypIP~Ndds~~si~li~~ll~~ai~~g~~~~~~~~~~~~~~ 232 (253)
T 3bch_A 153 RLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 232 (253)
T ss_dssp SEEEESCTTTTHHHHHHHHHTTCCEEEEECTTCCCTTCSEEEESCCSSHHHHHHHHHHHHHHHHHHHTSSCSSSCCSSCG
T ss_pred CCEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 60145556775077777765389889994478885558767868887465799999999999999717766345542364
Q ss_pred C
Q ss_conf 1
Q gi|254780779|r 240 A 240 (278)
Q Consensus 240 ~ 240 (278)
+
T Consensus 233 ~ 233 (253)
T 3bch_A 233 D 233 (253)
T ss_dssp G
T ss_pred C
T ss_conf 1