HHsearch alignment of GI: 254780779 and MMDB domain: 3jyv_B_

>3jyv_B (B:) 40S ribosomal protein S0(A); eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_B
Probab=100.00  E-value=0  Score=447.94  Aligned_cols=183  Identities=25%  Similarity=0.373  Sum_probs=173.6

Q ss_pred             CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
Q ss_conf             662458999860886075477657885621020018-8167538999999999999999861078816996078235799
Q gi|254780779|r    3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDC   81 (278)
Q Consensus         3 m~~~t~~~Ll~ag~H~Gh~~~~wnPkM~~yI~g~rn-gihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~   81 (278)
                      |+.+++++||+||+||||++  |||+|+|||||.|+ |+|||||++|+.+|++|++|++.+ .++|+||||||+++++++
T Consensus         1 m~~~~i~~ll~ag~HlG~~~--~n~~m~~yIyg~R~~gi~IidL~~T~~~L~~A~~~i~~i-~~~~~il~v~t~~~~~~~   77 (193)
T 3jyv_B            1 LTPEDAQLLLAANTHLGARN--VQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAI-PNPEDVVAISSRTFGQRA   77 (193)
T ss_dssp             CCCTTTTTHHHHTSSCCCSC--CCTTTTTTEEEECTTSCEEECHHHHHHHHHHHHHHHTTS-CSGGGEEECBCSSHHHHH
T ss_pred             CCHHHHHHHHHCCEECCCCC--CCCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHH
T ss_conf             98799999997093517688--899862530066689858964999999999999998740-369708996277888999


Q ss_pred             HHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             99998633983142334587323426665556778998876301212677467887665567776434433221135957
Q gi|254780779|r   82 VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDL  161 (278)
Q Consensus        82 i~~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~~~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~  161 (278)
                      |+++|++||++||++||+|||||||.++++                                             ++|++
T Consensus        78 v~k~a~~~~~~~v~~rw~~G~LTN~~~~~~---------------------------------------------~~P~~  112 (193)
T 3jyv_B           78 VLKFAAHTGATPIAGRFTPGSFTNYITRSF---------------------------------------------KEPRL  112 (193)
T ss_dssp             HHHHHHHHCCBCCBSCCCSCSSSCSSSTTC---------------------------------------------CCCSE
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---------------------------------------------CCCCC
T ss_conf             999999829944565535754355331134---------------------------------------------34772


Q ss_pred             EEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999438877123212343398145403677670011520321577268999999999999999999744310
Q gi|254780779|r  162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM  233 (278)
Q Consensus       162 iiv~d~~~e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~~~~~~~  233 (278)
                      +||+||..+++||+||.++|||+||+|||||||+.|||||||||||++||+|+++++++||++|++.+....
T Consensus       113 iii~d~~~~~~ai~Ea~~l~IP~I~l~DTn~~p~~idypIP~Nd~s~~si~li~~~l~~ai~~~~~~~~~~~  184 (193)
T 3jyv_B          113 VIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRT  184 (193)
T ss_dssp             EECSCTTTSHHHHHHHHHTTCCEEEEECTTCCCSSCSEEEESCSSCTTHHHHHHHHHHHHHHHHHTCCCCSC
T ss_pred             EEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             046523343088999975499879873489996457757607885487999999999999999817777768