HHsearch alignment of GI: 254780779 and MMDB domain: 3jyv_B_
>3jyv_B (B:) 40S ribosomal protein S0(A); eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_B
Probab=100.00 E-value=0 Score=447.94 Aligned_cols=183 Identities=25% Similarity=0.373 Sum_probs=173.6
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
Q ss_conf 662458999860886075477657885621020018-8167538999999999999999861078816996078235799
Q gi|254780779|r 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDC 81 (278)
Q Consensus 3 m~~~t~~~Ll~ag~H~Gh~~~~wnPkM~~yI~g~rn-gihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~ 81 (278)
|+.+++++||+||+||||++ |||+|+|||||.|+ |+|||||++|+.+|++|++|++.+ .++|+||||||+++++++
T Consensus 1 m~~~~i~~ll~ag~HlG~~~--~n~~m~~yIyg~R~~gi~IidL~~T~~~L~~A~~~i~~i-~~~~~il~v~t~~~~~~~ 77 (193)
T 3jyv_B 1 LTPEDAQLLLAANTHLGARN--VQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAI-PNPEDVVAISSRTFGQRA 77 (193)
T ss_dssp CCCTTTTTHHHHTSSCCCSC--CCTTTTTTEEEECTTSCEEECHHHHHHHHHHHHHHHTTS-CSGGGEEECBCSSHHHHH
T ss_pred CCHHHHHHHHHCCEECCCCC--CCCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHH
T ss_conf 98799999997093517688--899862530066689858964999999999999998740-369708996277888999
Q ss_pred HHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 99998633983142334587323426665556778998876301212677467887665567776434433221135957
Q gi|254780779|r 82 VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDL 161 (278)
Q Consensus 82 i~~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~~~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~ 161 (278)
|+++|++||++||++||+|||||||.++++ ++|++
T Consensus 78 v~k~a~~~~~~~v~~rw~~G~LTN~~~~~~---------------------------------------------~~P~~ 112 (193)
T 3jyv_B 78 VLKFAAHTGATPIAGRFTPGSFTNYITRSF---------------------------------------------KEPRL 112 (193)
T ss_dssp HHHHHHHHCCBCCBSCCCSCSSSCSSSTTC---------------------------------------------CCCSE
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---------------------------------------------CCCCC
T ss_conf 999999829944565535754355331134---------------------------------------------34772
Q ss_pred EEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999438877123212343398145403677670011520321577268999999999999999999744310
Q gi|254780779|r 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 (278)
Q Consensus 162 iiv~d~~~e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~~~~~~~ 233 (278)
+||+||..+++||+||.++|||+||+|||||||+.|||||||||||++||+|+++++++||++|++.+....
T Consensus 113 iii~d~~~~~~ai~Ea~~l~IP~I~l~DTn~~p~~idypIP~Nd~s~~si~li~~~l~~ai~~~~~~~~~~~ 184 (193)
T 3jyv_B 113 VIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRT 184 (193)
T ss_dssp EECSCTTTSHHHHHHHHHTTCCEEEEECTTCCCSSCSEEEESCSSCTTHHHHHHHHHHHHHHHHHTCCCCSC
T ss_pred EEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 046523343088999975499879873489996457757607885487999999999999999817777768