HHsearch results for GI: 254780779 and protein with PDBid: 2vqe_B
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=100.00 E-value=0 Score=599.81 Aligned_cols=228 Identities=46% Similarity=0.800 Sum_probs=221.2
Q ss_pred CC-CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
Q ss_conf 66-24589998608860754776578856210200188167538999999999999999861078816996078235799
Q gi|254780779|r 3 LP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDC 81 (278)
Q Consensus 3 m~-~~t~~~Ll~ag~H~Gh~~~~wnPkM~~yI~g~rngihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~ 81 (278)
|| ++|+++||+|||||||++++|||+|+|||||.|||+|||||++|+.+|++|+.|++.++.+||+|||||||+|++.+
T Consensus 1 m~~~~ti~~ll~ag~H~Gh~~~~wnp~m~~yIyg~r~gi~IIdL~kT~~~L~~A~~~i~~i~~~~g~iLfVgTk~~~~~~ 80 (256)
T 2vqe_B 1 MPVEITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDI 80 (256)
T ss_dssp -----CCCSTTCSSTTCCCBSSSCCGGGSTTEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEECCSSSSTTT
T ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
T ss_conf 99747799999719826667685798875612045088168869999999999999999885179869999575999999
Q ss_pred HHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999986339831423345873234266655567789988763-0121267746788766556777643443322113595
Q gi|254780779|r 82 VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD 160 (278)
Q Consensus 82 i~~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~~-~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~ 160 (278)
|+++|.+||+||||+||+|||||||+||++|+.+|++++... .+.++.|||||.+.+.|++.||+++||||++|.++||
T Consensus 81 v~~~A~~~~~~yvn~RWlgG~LTN~~~i~~~i~~l~~l~~~~~~~~~~~l~Kke~~~~~~~~~kl~~~~~Gi~~m~~~Pd 160 (256)
T 2vqe_B 81 VRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPD 160 (256)
T ss_dssp TTTTTTSSSCCEECSCCCTTTTTTHHHHHHHHHHHHHHHHHTTSTTSSCSCHHHHTTHHHHHHHHHHHSTTGGGCSSCCS
T ss_pred HHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999995993362441287501746665676543577755124520125606888867899999986157522246897
Q ss_pred EEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7999438877123212343398145403677670011520321577268999999999999999999744
Q gi|254780779|r 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 (278)
Q Consensus 161 ~iiv~d~~~e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~~~~ 230 (278)
+|||+||..|++||+||.+|||||||||||||||++|||||||||||++||+||++.+++||++|+..+.
T Consensus 161 ~v~v~d~~~~~~AI~EA~~l~IPvIaivDTn~~p~~IdypIP~NDds~~sI~li~~~l~~ai~~g~~~~~ 230 (256)
T 2vqe_B 161 AIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVV 230 (256)
T ss_dssp EEEESCTTTTHHHHHHHHHTTCCCEECCCTTSCGGGCSEECCSCSSCHHHHHHHHHHHHHHHHTTTSCCC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7996377500889999998589557761389880005446546886198999999999999999840112