HHsearch results for GI: 254780779 and protein with PDBid: 3bbn_B
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=100.00 E-value=0 Score=570.25 Aligned_cols=226 Identities=38% Similarity=0.629 Sum_probs=219.8
Q ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Q ss_conf 62458999860886075477657885621020018816753899999999999999986107881699607823579999
Q gi|254780779|r 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 (278)
Q Consensus 4 ~~~t~~~Ll~ag~H~Gh~~~~wnPkM~~yI~g~rngihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~i~ 83 (278)
-++|+++||+||+||||++++|||+|+|||||.|||+|||||++|+.+|++|+.|+.+++.+||+||||||+++++++|+
T Consensus 2 ~~v~i~~ll~ag~H~Gh~~~~wnp~m~~yI~g~r~gi~IIdl~~T~~~L~~A~~~l~~i~~~~~~iLfVgtk~~~~~~v~ 81 (231)
T 3bbn_B 2 WNINLEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLIVGTKNKAADSVA 81 (231)
T ss_dssp CSCSSHHHHHTSSSSCCCSSCCCGGGGGGEEEEETTEEEECHHHHHHHTHHHHHHSHHHHTTTCCEEEECCCTTTHHHHH
T ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
T ss_conf 88889999971884667767479885151115459814885999999999999999999837980599966487999999
Q ss_pred HHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 9986339831423345873234266655567789988763-012126774678876655677764344332211359579
Q gi|254780779|r 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLM 162 (278)
Q Consensus 84 ~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~~-~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~i 162 (278)
++|++|++|||++||+|||||||.||++++++|++++... .+.++.|||||.+.+.|++.||+++|+|+++|.++||+|
T Consensus 82 ~~a~~~~~~yv~~rW~gG~LTN~~~i~~~i~~~~~l~~~~~~~~~~~~~kk~~~~~~~~~~kl~k~~~Gi~~m~~~Pd~v 161 (231)
T 3bbn_B 82 RAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIV 161 (231)
T ss_dssp HHHHHHTCEECCSSCCSCSSSCHHHHHHHHHHHHHHHHSTTSTTTTTSCHHHHHHHHHHHHHHTTSTTSTTSCCSCCSEE
T ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEE
T ss_conf 99999699031672158865247888667765899988862152311888899887689999987314631031299779
Q ss_pred EEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9943887712321234339814540367767001152032157726899999999999999999974
Q gi|254780779|r 163 FVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 (278)
Q Consensus 163 iv~d~~~e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~~~ 229 (278)
||+||..|++||+||.+|||||||||||||||+.|||||||||||++||+|+++.+++||++|++.+
T Consensus 162 iv~d~~~~~~ai~Ea~~l~IPvI~ivDtn~~p~~idypIP~Ndds~~si~li~~~l~~ai~~gk~~~ 228 (231)
T 3bbn_B 162 IIVDQQEEYTALRECITLGIPTICLIDTNCNPDLADISIPANDDAIASIRLILTKLVFAICEGRSSY 228 (231)
T ss_dssp EESCTTTTHHHHHHHHTTTCCEEECCCSSSCCSSCSEECCCCSSSHHHHHHHHHHHHHHHHHTSSCC
T ss_pred EECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8528632279999999739987887438989775536873788769999999999999999998876