HHSEARCH alignment of GI: 254780779 and SCOP domain: d1tk9a_

Alignment

Probab=96.70  E-value=0.023  Score=33.32  Aligned_cols=150  Identities=19%  Similarity=0.257  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEECCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999999999861078816996078235799999986339831423345873-234266655567789988763012
Q gi|254780779|r   48 TVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGM-MTNWKTVSQSIQKLRDLEELLNKE  126 (278)
Q Consensus        48 T~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~i~~~A~~~~~~yV~~RWlGG~-LTN~~ti~~si~~l~~l~~~~~~~  126 (278)
                      ....+..+.+.+.+...+||+|+++|..-.+.....-.++-.+.+-...+=+++. |+.-..+...+..        +.+
T Consensus        24 ~~~~I~~~~~~i~~~l~~ggkI~~~GnGgSa~~A~h~a~el~~~~~~~r~~l~~i~l~~~~a~~ta~~n--------d~~   95 (188)
T d1tk9a_          24 LKGQIAKVGELLCECLKKGGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGN--------DYG   95 (188)
T ss_dssp             GHHHHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEESSCCHHHHHHHHH--------HTC
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCC
T ss_conf             199999999999999985998999878875223647777625876555444334257786122323235--------467


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC----HHHHHHHHCCCEEEEECCCCCCC--HHCCCE
Q ss_conf             126774678876655677764344332211359579994388771----23212343398145403677670--011520
Q gi|254780779|r  127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREK----LAIQEARRLRIPIVAVVDTNSNP--DLVDYV  200 (278)
Q Consensus       127 ~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~iiv~d~~~e~----~Av~EA~kl~IPvIaivDTn~dp--~~idyp  200 (278)
                      ++.       .+.|+.          +...+--|+++++....++    .|++.|++.|+++|+++-.+.++  ...|+.
T Consensus        96 ~e~-------~f~~ql----------~~~~~~gDili~iS~SG~S~nii~a~~~Ak~~g~~ti~ltg~~~~~l~~~~D~~  158 (188)
T d1tk9a_          96 FEF-------VFSRQV----------EALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHN  158 (188)
T ss_dssp             GGG-------HHHHHH----------HHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEE
T ss_pred             HHH-------HHHHHH----------HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCEE
T ss_conf             799-------999999----------983688847999537988812688889998511538998079973568758998


Q ss_pred             EEECCCCHHHHH----HHHHHHHHHH
Q ss_conf             321577268999----9999999999
Q gi|254780779|r  201 IPGNDDSSRSIA----LFCDLVASAA  222 (278)
Q Consensus       201 IP~NDds~~si~----l~~~~i~~ai  222 (278)
                      |-.+.+...-|+    +++..+++.|
T Consensus       159 i~i~s~~~~~iee~hl~i~H~l~~~i  184 (188)
T d1tk9a_         159 LVVPSDDTARIQEMHILIIHTLCQII  184 (188)
T ss_dssp             EEESCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99799984899999999999999999

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: SIS domain
superfamily: SIS domain
family: mono-SIS domain
domain: Phosphoheptose isomerase GmhA1
species: Campylobacter jejuni [TaxId: 197]