HHSEARCH alignment of GI: 254780779 and SCOP domain: d2gy9b1

Alignment
>d2gy9b1 c.23.15.1 (B:8-225) Ribosomal protein S2 {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=575.64  Aligned_cols=217  Identities=51%  Similarity=0.872  Sum_probs=212.8

Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             98608860754776578856210200188167538999999999999999861078816996078235799999986339
Q gi|254780779|r   11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSA   90 (278)
Q Consensus        11 Ll~ag~H~Gh~~~~wnPkM~~yI~g~rngihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~i~~~A~~~~   90 (278)
                      ||+|||||||++++|||+|+|||||.|||+|||||++|+.+|++|++|+++++.+||+||||||++|++++|+++|++|+
T Consensus         1 ll~ag~H~Gh~~~~wnp~m~~yIyg~r~gi~IIdL~~T~~~L~~A~~~l~~~~~~~g~iLfVgTk~~~~~~i~~~a~~~~   80 (218)
T d2gy9b1           1 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCD   80 (218)
T ss_dssp             SCCTTSSSCCCSSCCCGGGGGGBCCCBTTBCCBCHHHHHHHHHHHHHHHHHHHTTTCCEEEECCSTTSHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf             97655025766674698751400046499689829999999999999998864089869998356334499999998619


Q ss_pred             CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf             83142334587323426665556778998876-30121267746788766556777643443322113595799943887
Q gi|254780779|r   91 QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR  169 (278)
Q Consensus        91 ~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~-~~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~iiv~d~~~  169 (278)
                      +||||+||+|||||||+||++|+++|+.++.+ ..+.++.+||||.+.+.|++.||+++||||++|.++||+|||+|+..
T Consensus        81 ~~yvn~rWlgG~LTN~~~i~~~i~~l~~l~~~~~~~~~~~~~Kke~~~~~~~~~kl~~~~~Gi~~m~~lPd~vii~d~~~  160 (218)
T d2gy9b1          81 QFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADH  160 (218)
T ss_dssp             CEEECSCCCTTTTTTHHHHHHHHHHHHHHHHHHSSTTSSSSCHHHHHHHHHHHHHHHHHSSSGGGCCCCCCEEEESCTTT
T ss_pred             CCEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCC
T ss_conf             82303246568134443423477889998877514752456248899989999999986068567777871456416641


Q ss_pred             CCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7123212343398145403677670011520321577268999999999999999999
Q gi|254780779|r  170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA  227 (278)
Q Consensus       170 e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~  227 (278)
                      |++||+||.++||||||||||||||+.|||||||||||++||+||++.+++||++|+.
T Consensus       161 ~~~ai~Ea~~l~IP~I~ivDTn~dp~~idypIP~Ndds~~sI~li~~~l~~ai~~G~~  218 (218)
T d2gy9b1         161 EHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRS  218 (218)
T ss_dssp             THHHHHHHHHTTCCEEECCCSSSCGGGCTEECCSCSSCHHHHHHHHHHHHHHHHTTTT
T ss_pred             CHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             1899999987599779996479997657666536886799999999999999996459


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Ribosomal protein S2
family: Ribosomal protein S2
domain: Ribosomal protein S2
species: Escherichia coli [TaxId: 562]