BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780779|ref|YP_003065192.1| 30S ribosomal protein S2 [Candidatus Liberibacter asiaticus str. psy62] (278 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780779|ref|YP_003065192.1| 30S ribosomal protein S2 [Candidatus Liberibacter asiaticus str. psy62] gi|254040456|gb|ACT57252.1| 30S ribosomal protein S2 [Candidatus Liberibacter asiaticus str. psy62] Length = 278 Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust. Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS Sbjct: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE Sbjct: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL Sbjct: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA Sbjct: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS Sbjct: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 >gi|315121996|ref|YP_004062485.1| 30S ribosomal protein S2 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495398|gb|ADR51997.1| 30S ribosomal protein S2 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 289 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 220/264 (83%), Positives = 239/264 (90%), Gaps = 6/264 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT++QLLESGVQFGHR FLWNPKM+ YIFCER+NTHIIDLSQTVPML KALQV+S Sbjct: 1 MAIPNFTMQQLLESGVQFGHRKFLWNPKMKPYIFCERSNTHIIDLSQTVPMLHKALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFVATK QAS+ VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL+ Sbjct: 61 DTVARGGRILFVATKPQASNVVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL+KENQ FTKKERLNIER+RDKLKRALDGIRDMGGLPDLMF++DTNREKLAI+EARRL Sbjct: 121 ELLSKENQDFTKKERLNIERRRDKLKRALDGIRDMGGLPDLMFIIDTNREKLAIEEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIPIVAVVD+N NPDL+DY+IPGNDDS+RSIALFCDLVASAAIDGIARQHSYMG DTK Sbjct: 181 RIPIVAVVDSNCNPDLIDYIIPGNDDSARSIALFCDLVASAAIDGIARQHSYMGGDTKPL 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSV 264 V LEEDS++ E V Sbjct: 241 DNDV------KSLEEDSKNLEGEV 258 >gi|86357534|ref|YP_469426.1| 30S ribosomal protein S2 [Rhizobium etli CFN 42] gi|209549182|ref|YP_002281099.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|123738344|sp|Q2K8Y7|RS2_RHIEC RecName: Full=30S ribosomal protein S2 gi|238058199|sp|B5ZN83|RS2_RHILW RecName: Full=30S ribosomal protein S2 gi|86281636|gb|ABC90699.1| 30S ribosomal protein S2 [Rhizobium etli CFN 42] gi|209534938|gb|ACI54873.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 255 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 168/245 (68%), Positives = 210/245 (85%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILNGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSSGRDLGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 SEVPV 245 >gi|116251977|ref|YP_767815.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. viciae 3841] gi|241204504|ref|YP_002975600.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|123081925|sp|Q1MH54|RS2_RHIL3 RecName: Full=30S ribosomal protein S2 gi|115256625|emb|CAK07713.1| putative 30S ribosomal protein S2 [Rhizobium leguminosarum bv. viciae 3841] gi|240858394|gb|ACS56061.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 255 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/245 (68%), Positives = 209/245 (85%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILNGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQGSSGRDLGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 SEVPV 245 >gi|190891607|ref|YP_001978149.1| 30S ribosomal protein S2 [Rhizobium etli CIAT 652] gi|238692537|sp|B3PYP2|RS2_RHIE6 RecName: Full=30S ribosomal protein S2 gi|190696886|gb|ACE90971.1| 30S ribosomal protein S2 [Rhizobium etli CIAT 652] Length = 255 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/245 (68%), Positives = 209/245 (85%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILGGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSSGRDLGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 SEVPV 245 >gi|327189222|gb|EGE56401.1| 30S ribosomal protein S2 [Rhizobium etli CNPAF512] Length = 255 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 166/245 (67%), Positives = 209/245 (85%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQ++S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQIVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILGGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSSGRDLGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 SEVPV 245 >gi|222085857|ref|YP_002544388.1| ribosomal protein S2 [Agrobacterium radiobacter K84] gi|254764450|sp|B9JEX0|RS2_AGRRK RecName: Full=30S ribosomal protein S2 gi|221723305|gb|ACM26461.1| ribosomal protein S2 [Agrobacterium radiobacter K84] Length = 256 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/245 (68%), Positives = 210/245 (85%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVP+L +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPLLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASELIADSAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN + QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILNGDAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+CDL+A AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLIARAAIDGIARQQSASGRDLGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 IEAPV 245 >gi|15965248|ref|NP_385601.1| 30S ribosomal protein S2 [Sinorhizobium meliloti 1021] gi|307309271|ref|ZP_07588939.1| ribosomal protein S2 [Sinorhizobium meliloti BL225C] gi|307317013|ref|ZP_07596454.1| ribosomal protein S2 [Sinorhizobium meliloti AK83] gi|25009215|sp|Q92Q55|RS2_RHIME RecName: Full=30S ribosomal protein S2 gi|15074428|emb|CAC46074.1| Probable 30S ribosomal protein S2 [Sinorhizobium meliloti 1021] gi|306897101|gb|EFN27846.1| ribosomal protein S2 [Sinorhizobium meliloti AK83] gi|306900272|gb|EFN30889.1| ribosomal protein S2 [Sinorhizobium meliloti BL225C] Length = 255 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/259 (66%), Positives = 210/259 (81%), Gaps = 4/259 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QAS+ + +AAKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVASGGRVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMF++DTN+E +AI EA+RL Sbjct: 121 EILASEASGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD+SR+IAL+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAVIDSNCDPDQIDYAIPGNDDASRAIALYCDLIARAAIDGIARQQGASGRDLGAS 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V LEE S++ Sbjct: 241 EEVPVEPA----LEEASEA 255 >gi|227821897|ref|YP_002825867.1| 30S ribosomal protein S2 [Sinorhizobium fredii NGR234] gi|254764486|sp|C3MBQ2|RS2_RHISN RecName: Full=30S ribosomal protein S2 gi|227340896|gb|ACP25114.1| 30S ribosomal protein S2 [Sinorhizobium fredii NGR234] Length = 255 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 169/259 (65%), Positives = 211/259 (81%), Gaps = 4/259 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QAS+ + +AAKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVANGGRVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMF++DTN+E +AI+EA+RL Sbjct: 121 EILASEASGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD+SR++AL+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQGAAGRDLGAS 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V L+E S++ Sbjct: 241 AEVPVEPA----LDESSEA 255 >gi|150396350|ref|YP_001326817.1| 30S ribosomal protein S2 [Sinorhizobium medicae WSM419] gi|166226757|sp|A6U8K2|RS2_SINMW RecName: Full=30S ribosomal protein S2 gi|150027865|gb|ABR59982.1| ribosomal protein S2 [Sinorhizobium medicae WSM419] Length = 255 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/259 (65%), Positives = 211/259 (81%), Gaps = 4/259 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QAS+ + +AAKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVASGGRVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMF++DTN+E +AI+EA+RL Sbjct: 121 EILASEASGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD+SR++AL+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQGASGRDLGAS 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V LEE S++ Sbjct: 241 EEVPVEPA----LEEASEA 255 >gi|110633734|ref|YP_673942.1| 30S ribosomal protein S2 [Mesorhizobium sp. BNC1] gi|123057988|sp|Q11IJ8|RS2_MESSB RecName: Full=30S ribosomal protein S2 gi|110284718|gb|ABG62777.1| SSU ribosomal protein S2P [Chelativorans sp. BNC1] Length = 267 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/249 (67%), Positives = 206/249 (82%), Gaps = 3/249 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM YIF ERNN HIIDLSQTVP+L +AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMTPYIFGERNNIHIIDLSQTVPLLHQALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTV RGGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVGRGGRLLFVGTKRQASDIVADAARRSAQYYVNSRWLGGMLTNWKTISNSIQRLRRLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L+ EN G TKKERLN+ER+RDKL+RAL GIRDMG PD+MFV+DTN+E +A+QEARRL Sbjct: 121 EMLSSENLGLTKKERLNLERERDKLERALGGIRDMGSTPDMMFVIDTNKEAIAVQEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AV+D+N +PD+VDY IPGNDD++R+IAL+CDL+A AAIDGI RQ +G D Sbjct: 181 GIPVIAVIDSNCDPDVVDYPIPGNDDAARAIALYCDLIAKAAIDGIERQQGSLGVDI--- 237 Query: 241 GETVVHSKE 249 GE+ E Sbjct: 238 GESAAAPSE 246 >gi|159184736|ref|NP_354381.2| 30S ribosomal protein S2 [Agrobacterium tumefaciens str. C58] gi|25009204|sp|Q8UFM3|RS2_AGRT5 RecName: Full=30S ribosomal protein S2 gi|159140024|gb|AAK87166.2| 30S ribosomal protein S2 [Agrobacterium tumefaciens str. C58] Length = 255 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 161/245 (65%), Positives = 209/245 (85%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR ++ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E G++KKERL +ER+R+KL++AL GIRDMGG+PDLMF++DTN+EK+AI+EA+RL Sbjct: 121 EILNSEGSGYSKKERLTLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +DY IPGNDD+SR+I+L+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDGIARQQGASGRDIGAS 240 Query: 241 GETVV 245 E + Sbjct: 241 EEAPI 245 >gi|153009359|ref|YP_001370574.1| 30S ribosomal protein S2 [Ochrobactrum anthropi ATCC 49188] gi|166225290|sp|A6X0J1|RS2_OCHA4 RecName: Full=30S ribosomal protein S2 gi|151561247|gb|ABS14745.1| ribosomal protein S2 [Ochrobactrum anthropi ATCC 49188] Length = 256 Score = 365 bits (937), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 163/245 (66%), Positives = 204/245 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM YI+ +RNN HI+DLSQTVP+L AL+++S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPYIYGDRNNIHILDLSQTVPLLHNALKIVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 240 Query: 241 GETVV 245 E V Sbjct: 241 AEAPV 245 >gi|239832049|ref|ZP_04680378.1| ribosomal protein S2 [Ochrobactrum intermedium LMG 3301] gi|239824316|gb|EEQ95884.1| ribosomal protein S2 [Ochrobactrum intermedium LMG 3301] Length = 256 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 163/245 (66%), Positives = 204/245 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM YI+ +RNN HI+DLSQTVP+L AL+++S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPYIYGDRNNIHILDLSQTVPLLHNALKIVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDIGAQ 240 Query: 241 GETVV 245 E V Sbjct: 241 AEAPV 245 >gi|225627630|ref|ZP_03785667.1| ribosomal protein S2 [Brucella ceti str. Cudo] gi|237815581|ref|ZP_04594578.1| ribosomal protein S2 [Brucella abortus str. 2308 A] gi|294852501|ref|ZP_06793174.1| 30S ribosomal protein S2 [Brucella sp. NVSL 07-0026] gi|225617635|gb|EEH14680.1| ribosomal protein S2 [Brucella ceti str. Cudo] gi|237788879|gb|EEP63090.1| ribosomal protein S2 [Brucella abortus str. 2308 A] gi|294821090|gb|EFG38089.1| 30S ribosomal protein S2 [Brucella sp. NVSL 07-0026] Length = 266 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 164/245 (66%), Positives = 204/245 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 11 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 71 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 130 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 131 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 190 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 191 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 250 Query: 241 GETVV 245 E V Sbjct: 251 VEAPV 255 >gi|23502040|ref|NP_698167.1| 30S ribosomal protein S2 [Brucella suis 1330] gi|62290075|ref|YP_221868.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. 9-941] gi|82700001|ref|YP_414575.1| 30S ribosomal protein S2 [Brucella melitensis biovar Abortus 2308] gi|161619113|ref|YP_001593000.1| 30S ribosomal protein S2 [Brucella canis ATCC 23365] gi|163843426|ref|YP_001627830.1| 30S ribosomal protein S2 [Brucella suis ATCC 23445] gi|189024314|ref|YP_001935082.1| 30S ribosomal protein S2 [Brucella abortus S19] gi|225852659|ref|YP_002732892.1| 30S ribosomal protein S2 [Brucella melitensis ATCC 23457] gi|254689385|ref|ZP_05152639.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870] gi|254693869|ref|ZP_05155697.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya] gi|254697520|ref|ZP_05159348.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59] gi|254701903|ref|ZP_05163731.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513] gi|254704448|ref|ZP_05166276.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686] gi|254710236|ref|ZP_05172047.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94] gi|254714232|ref|ZP_05176043.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1] gi|254717668|ref|ZP_05179479.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1] gi|254719224|ref|ZP_05181035.1| 30S ribosomal protein S2 [Brucella sp. 83/13] gi|254730415|ref|ZP_05188993.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292] gi|256031730|ref|ZP_05445344.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1] gi|256044817|ref|ZP_05447721.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1] gi|256061243|ref|ZP_05451394.1| 30S ribosomal protein S2 [Brucella neotomae 5K33] gi|256113722|ref|ZP_05454526.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether] gi|256159896|ref|ZP_05457618.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1] gi|256255130|ref|ZP_05460666.1| 30S ribosomal protein S2 [Brucella ceti B1/94] gi|256257631|ref|ZP_05463167.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68] gi|256263847|ref|ZP_05466379.1| ribosomal protein S2 [Brucella melitensis bv. 2 str. 63/9] gi|256369587|ref|YP_003107097.1| 30S ribosomal protein S2 [Brucella microti CCM 4915] gi|260168863|ref|ZP_05755674.1| 30S ribosomal protein S2 [Brucella sp. F5/99] gi|260546625|ref|ZP_05822364.1| ribosomal protein S2 [Brucella abortus NCTC 8038] gi|260565583|ref|ZP_05836067.1| ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M] gi|260566305|ref|ZP_05836775.1| ribosomal protein S2 [Brucella suis bv. 4 str. 40] gi|260754903|ref|ZP_05867251.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870] gi|260758120|ref|ZP_05870468.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292] gi|260761946|ref|ZP_05874289.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59] gi|260883915|ref|ZP_05895529.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68] gi|261214155|ref|ZP_05928436.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya] gi|261219509|ref|ZP_05933790.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1] gi|261222328|ref|ZP_05936609.1| 30S ribosomal protein S2 [Brucella ceti B1/94] gi|261317795|ref|ZP_05956992.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94] gi|261322004|ref|ZP_05961201.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1] gi|261325251|ref|ZP_05964448.1| 30S ribosomal protein S2 [Brucella neotomae 5K33] gi|261752467|ref|ZP_05996176.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513] gi|261755126|ref|ZP_05998835.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686] gi|261758351|ref|ZP_06002060.1| ribosomal protein S2 [Brucella sp. F5/99] gi|265984219|ref|ZP_06096954.1| 30S ribosomal protein S2 [Brucella sp. 83/13] gi|265988826|ref|ZP_06101383.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1] gi|265991241|ref|ZP_06103798.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1] gi|265995077|ref|ZP_06107634.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether] gi|265998292|ref|ZP_06110849.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1] gi|297248473|ref|ZP_06932191.1| 30S ribosomal protein S2 [Brucella abortus bv. 5 str. B3196] gi|306837973|ref|ZP_07470831.1| ribosomal protein S2 [Brucella sp. NF 2653] gi|306844026|ref|ZP_07476621.1| ribosomal protein S2 [Brucella sp. BO1] gi|38258384|sp|Q8G0D6|RS2_BRUSU RecName: Full=30S ribosomal protein S2 gi|75505270|sp|Q57CX7|RS2_BRUAB RecName: Full=30S ribosomal protein S2 gi|123768485|sp|Q2YRJ1|RS2_BRUA2 RecName: Full=30S ribosomal protein S2 gi|189044927|sp|A9M5H4|RS2_BRUC2 RecName: Full=30S ribosomal protein S2 gi|189044928|sp|B0CGV9|RS2_BRUSI RecName: Full=30S ribosomal protein S2 gi|238689378|sp|B2S611|RS2_BRUA1 RecName: Full=30S ribosomal protein S2 gi|254764461|sp|C0RJD0|RS2_BRUMB RecName: Full=30S ribosomal protein S2 gi|23347995|gb|AAN30082.1| ribosomal protein S2 [Brucella suis 1330] gi|62196207|gb|AAX74507.1| RpsB, ribosomal protein S2 [Brucella abortus bv. 1 str. 9-941] gi|82616102|emb|CAJ11140.1| Ribosomal protein S2:Ribosomal protein S2, bacterial and organelle form [Brucella melitensis biovar Abortus 2308] gi|161335924|gb|ABX62229.1| ribosomal protein S2 [Brucella canis ATCC 23365] gi|163674149|gb|ABY38260.1| ribosomal protein S2 [Brucella suis ATCC 23445] gi|189019886|gb|ACD72608.1| Ribosomal protein S2 [Brucella abortus S19] gi|225641024|gb|ACO00938.1| ribosomal protein S2 [Brucella melitensis ATCC 23457] gi|255999749|gb|ACU48148.1| 30S ribosomal protein S2 [Brucella microti CCM 4915] gi|260095675|gb|EEW79552.1| ribosomal protein S2 [Brucella abortus NCTC 8038] gi|260151651|gb|EEW86745.1| ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M] gi|260155823|gb|EEW90903.1| ribosomal protein S2 [Brucella suis bv. 4 str. 40] gi|260668438|gb|EEX55378.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292] gi|260672378|gb|EEX59199.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59] gi|260675011|gb|EEX61832.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870] gi|260873443|gb|EEX80512.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68] gi|260915762|gb|EEX82623.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya] gi|260920912|gb|EEX87565.1| 30S ribosomal protein S2 [Brucella ceti B1/94] gi|260924598|gb|EEX91166.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1] gi|261294694|gb|EEX98190.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1] gi|261297018|gb|EEY00515.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94] gi|261301231|gb|EEY04728.1| 30S ribosomal protein S2 [Brucella neotomae 5K33] gi|261738335|gb|EEY26331.1| ribosomal protein S2 [Brucella sp. F5/99] gi|261742220|gb|EEY30146.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513] gi|261744879|gb|EEY32805.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686] gi|262552760|gb|EEZ08750.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1] gi|262766190|gb|EEZ11979.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether] gi|263002025|gb|EEZ14600.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1] gi|263093978|gb|EEZ17912.1| ribosomal protein S2 [Brucella melitensis bv. 2 str. 63/9] gi|264661023|gb|EEZ31284.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1] gi|264662811|gb|EEZ33072.1| 30S ribosomal protein S2 [Brucella sp. 83/13] gi|297175642|gb|EFH34989.1| 30S ribosomal protein S2 [Brucella abortus bv. 5 str. B3196] gi|306275781|gb|EFM57505.1| ribosomal protein S2 [Brucella sp. BO1] gi|306406897|gb|EFM63118.1| ribosomal protein S2 [Brucella sp. NF 2653] gi|326409180|gb|ADZ66245.1| Ribosomal protein S2 [Brucella melitensis M28] gi|326538890|gb|ADZ87105.1| ribosomal protein S2 [Brucella melitensis M5-90] Length = 256 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 164/245 (66%), Positives = 204/245 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 240 Query: 241 GETVV 245 E V Sbjct: 241 VEAPV 245 >gi|325292737|ref|YP_004278601.1| 30S ribosomal protein S2 [Agrobacterium sp. H13-3] gi|325060590|gb|ADY64281.1| 30S ribosomal protein S2 [Agrobacterium sp. H13-3] Length = 255 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 160/245 (65%), Positives = 208/245 (84%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR ++ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E G++KKERL +ER+R+KL++AL GIRDMGG+PDLMF++DTN+EK+AI+EA+RL Sbjct: 121 EILNSEGTGYSKKERLTLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +DY IPGNDD+SR+I+L+CDL+A AAIDGI RQ G D ++ Sbjct: 181 GIPVVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDGILRQQGSSGRDIGAS 240 Query: 241 GETVV 245 E + Sbjct: 241 EEAPI 245 >gi|222148862|ref|YP_002549819.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] gi|221735848|gb|ACM36811.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] Length = 248 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 164/238 (68%), Positives = 202/238 (84%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+SDTVARGG Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QASD + +AAKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+E+LN E Sbjct: 61 RVLFVGTKRQASDLIADAAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNSEA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLM +VDTN+EK+AI EA+RL IP+VA+ Sbjct: 121 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMVIVDTNKEKIAIDEAKRLGIPVVAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +D+N +PDL+DY IPGNDD+SR+IAL+CDL++ AAIDGIARQ G D ++ E + Sbjct: 181 IDSNCDPDLIDYPIPGNDDASRAIALYCDLISRAAIDGIARQQGSSGRDIGASVEAPI 238 >gi|17982767|gb|AAL52004.1| ssu ribosomal protein s2p [Brucella melitensis bv. 1 str. 16M] Length = 266 Score = 361 bits (927), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 162/245 (66%), Positives = 203/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 11 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+L+V TK QASD + +A RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 71 DTVARGGRVLYVGTKRQASDIIADAGNRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 130 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 131 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 190 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 191 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 250 Query: 241 GETVV 245 E V Sbjct: 251 VEAPV 255 >gi|161511149|ref|NP_539740.2| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M] gi|38258888|sp|Q8YHH6|RS2_BRUME RecName: Full=30S ribosomal protein S2 Length = 256 Score = 361 bits (926), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 162/245 (66%), Positives = 203/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+L+V TK QASD + +A RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLYVGTKRQASDIIADAGNRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 240 Query: 241 GETVV 245 E V Sbjct: 241 VEAPV 245 >gi|222109130|ref|YP_002551395.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] gi|221738404|gb|ACM39269.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] Length = 307 Score = 361 bits (926), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 163/265 (61%), Positives = 213/265 (80%), Gaps = 7/265 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +R+N HIIDL QTVP+L +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTGRWNPKMKPYIFGDRSNIHIIDLGQTVPLLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E G++KKERL +ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI+EA+RL Sbjct: 121 EILNSEGSGYSKKERLTLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD +D+ IPGNDD+SR+I+L+CDL+A AAIDGI RQ +++ Sbjct: 181 GIPVVAIIDTNCDPDSIDFPIPGNDDASRAISLYCDLIARAAIDGIGRQQ-------RAS 233 Query: 241 GETVVHSKEGMQLEEDSQSSESSVL 265 G + S E LE+ S + V+ Sbjct: 234 GRDLGASPESFALEDQSDGESAKVV 258 >gi|114704876|ref|ZP_01437784.1| 30S ribosomal protein S2 [Fulvimarina pelagi HTCC2506] gi|114539661|gb|EAU42781.1| 30S ribosomal protein S2 [Fulvimarina pelagi HTCC2506] Length = 284 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 161/236 (68%), Positives = 198/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH+ WNPKM YIF RNN HI+DL+QTVP+L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQTHRWNPKMSPYIFGARNNIHILDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA+RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAAQRSAQYYVNARWLGGMMTNWKTISHSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL+ E QGFTKKERL + R+RDKL+ AL GIRDMGG+PD+MF++DTN+E +AI EARRL Sbjct: 121 ELLSGEAQGFTKKERLTLTRERDKLETALGGIRDMGGVPDMMFIIDTNKESIAIDEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVD+N +P VDY IPGNDD+SR+IAL+CDL+A AA+DGIARQ G D Sbjct: 181 GIPVVAVVDSNCDPARVDYPIPGNDDASRAIALYCDLIARAAVDGIARQQGDSGMD 236 >gi|306841885|ref|ZP_07474565.1| ribosomal protein S2 [Brucella sp. BO2] gi|306288015|gb|EFM59417.1| ribosomal protein S2 [Brucella sp. BO2] Length = 254 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 161/243 (66%), Positives = 202/243 (83%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+SDT Sbjct: 1 MPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+EL Sbjct: 61 VARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL I Sbjct: 121 LAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E Sbjct: 181 PVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVE 240 Query: 243 TVV 245 V Sbjct: 241 APV 243 >gi|319405845|emb|CBI79477.1| 30S ribosomal protein S2 [Bartonella sp. AR 15-3] Length = 287 Score = 357 bits (917), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 160/236 (67%), Positives = 198/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LP FT+RQLLE+GV FGH+ WNPKM YI+ ERNN HIIDLSQTVP+L +AL+V+S Sbjct: 22 MPLPDFTMRQLLEAGVHFGHQTHRWNPKMAPYIYGERNNIHIIDLSQTVPLLHQALKVVS 81 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 82 DTVACGGRVLFVGTKRQASDIISDAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 141 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L+ E QGFTKKERLN+ER R++L RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 142 KTLSSEIQGFTKKERLNLERDRERLNRALGGIKDMGSVPDLMFIIDTNKENIAIQEAKRL 201 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAV+DTN NPD +DY IPGNDD+SR++A +CDL+A AA+DGIARQ S MG D Sbjct: 202 GIPVVAVIDTNCNPDNIDYPIPGNDDASRAVAFYCDLIARAALDGIARQQSTMGVD 257 >gi|319404371|emb|CBI77974.1| 30S ribosomal protein S2 [Bartonella rochalimae ATCC BAA-1498] gi|319407374|emb|CBI81025.1| 30S ribosomal protein S2 [Bartonella sp. 1-1C] Length = 266 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 159/236 (67%), Positives = 198/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM YI+ +RNN HIIDLSQTVP+L +AL+V+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMAPYIYGQRNNIHIIDLSQTVPLLHQALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIISDAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L+ QGFTKKERLN+ER R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 KTLSSGVQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLMFIIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAV+DTN +PD +DY IPGNDD+SR++ +CDL+A AA+DGIARQ S MG D Sbjct: 181 GIPVVAVIDTNCDPDNIDYPIPGNDDASRAVTFYCDLIARAALDGIARQQSTMGVD 236 >gi|148558832|ref|YP_001259080.1| 30S ribosomal protein S2 [Brucella ovis ATCC 25840] gi|209573651|sp|A5VQT3|RS2_BRUO2 RecName: Full=30S ribosomal protein S2 gi|148370089|gb|ABQ60068.1| ribosomal protein S2 [Brucella ovis ATCC 25840] Length = 254 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 160/243 (65%), Positives = 201/243 (82%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+SDT Sbjct: 1 MPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+EL Sbjct: 61 VARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L E QGFTKKERLN+ER+R+KL R L GI+DMG +PDLMF++DTN+E +AIQEA+RL I Sbjct: 121 LAGEAQGFTKKERLNLEREREKLDRTLGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E Sbjct: 181 PVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVE 240 Query: 243 TVV 245 V Sbjct: 241 APV 243 >gi|121602757|ref|YP_988892.1| 30S ribosomal protein S2 [Bartonella bacilliformis KC583] gi|166225242|sp|A1USD9|RS2_BARBK RecName: Full=30S ribosomal protein S2 gi|120614934|gb|ABM45535.1| ribosomal protein S2 [Bartonella bacilliformis KC583] Length = 271 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 159/236 (67%), Positives = 199/236 (84%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM RYI+ +RNN HIIDLSQTVP+L +AL+++S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTQRWNPKMARYIYGQRNNVHIIDLSQTVPLLYQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTV RGGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVVRGGRVLFVGTKRQASDIIADAASRSAQYHVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E +GFTKKERLN+ER R+KL RAL GI+DMG +PDLMFV+DTN+E +AIQEA+RL Sbjct: 121 KILAAEARGFTKKERLNLERDREKLNRALGGIKDMGSIPDLMFVIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA++DTN +PD +DY IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D Sbjct: 181 GIPVVAIIDTNCDPDGIDYPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGVD 236 >gi|49474296|ref|YP_032338.1| 30S ribosomal protein S2 [Bartonella quintana str. Toulouse] gi|61215535|sp|Q6FZN0|RS2_BARQU RecName: Full=30S ribosomal protein S2 gi|49239800|emb|CAF26190.1| 30s ribosomal protein s2 [Bartonella quintana str. Toulouse] Length = 257 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 159/245 (64%), Positives = 202/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM RYI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMIRYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+F++DTN+E +AIQEA+RL Sbjct: 121 KILATETQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN NPD VD+ IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 181 GIPVIAIIDTNCNPDNVDHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGIDLGAQ 240 Query: 241 GETVV 245 + V Sbjct: 241 ADAPV 245 >gi|319408395|emb|CBI82050.1| 30S ribosomal protein S2 [Bartonella schoenbuchensis R1] Length = 258 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 158/245 (64%), Positives = 202/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTQRWNPKMAPYIYGQRNNIHIIDLAQTVPLLYQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVAQGGRVLFVGTKRQASDIIADAASRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDLMF+VDTN+E +AIQEA+RL Sbjct: 121 KILTTEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLMFIVDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +P++A+VDTN +PD +DY IPGNDD+SR+I+L+CDLVA AA+DGIARQ M D + Sbjct: 181 GVPVIAIVDTNCDPDGIDYPIPGNDDASRAISLYCDLVARAALDGIARQQGAMNIDVGAQ 240 Query: 241 GETVV 245 + V Sbjct: 241 ADVPV 245 >gi|49475410|ref|YP_033451.1| 30S ribosomal protein S2 [Bartonella henselae str. Houston-1] gi|61215541|sp|Q6G5C9|RS2_BARHE RecName: Full=30S ribosomal protein S2 gi|49238216|emb|CAF27426.1| 30S ribosomal protein s2 [Bartonella henselae str. Houston-1] Length = 257 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 158/245 (64%), Positives = 202/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+F++DTN+E +AIQEA+RL Sbjct: 121 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD VD+ IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 181 GIPVIAIIDTNCDPDNVDHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGIDLGAQ 240 Query: 241 GETVV 245 + V Sbjct: 241 ADAPV 245 >gi|90419592|ref|ZP_01227502.1| 30S ribosomal protein S2 [Aurantimonas manganoxydans SI85-9A1] gi|90336529|gb|EAS50270.1| 30S ribosomal protein S2 [Aurantimonas manganoxydans SI85-9A1] Length = 284 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 156/236 (66%), Positives = 196/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH+ WNPKM YIF RNN HI+DL QTVP+L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQTHRWNPKMSSYIFGARNNIHILDLGQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD V +AA RSAQY VN++WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIVADAANRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QGFTKKERL ++R+RDKL RAL GI+DMGG+PD++F++DTN+E +AI+EA+RL Sbjct: 121 EMLAGEAQGFTKKERLTLQRERDKLDRALGGIKDMGGVPDMIFIIDTNKESIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVAVVD+N +P +DY IPGNDD++R+I L+CDL+A AA+DGIARQ G D Sbjct: 181 HIPIVAVVDSNCDPAPIDYPIPGNDDAARAITLYCDLIARAAVDGIARQQGDSGMD 236 >gi|319899043|ref|YP_004159136.1| 30S ribosomal protein S2 [Bartonella clarridgeiae 73] gi|319403007|emb|CBI76562.1| 30S ribosomal protein S2 [Bartonella clarridgeiae 73] Length = 279 Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 155/236 (65%), Positives = 196/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM YI+ +R+N HIIDLSQTVP+L +AL+ +S Sbjct: 22 MALPDFTMRQLLEAGVHFGHQTHRWNPKMASYIYGQRSNIHIIDLSQTVPLLHQALKAVS 81 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKTVS SI +LR L+ Sbjct: 82 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTVSNSIHRLRKLD 141 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L + QGFTKKERL +ER R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 142 KTLASDVQGFTKKERLKLERDREKLNRALGGIKDMGSVPDLMFIIDTNKENIAIQEAKRL 201 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA++DTN +PD +DY IPGNDD+SR+++ +CDL+A AA+DGIARQ MG D Sbjct: 202 GIPVVAIIDTNCDPDNIDYPIPGNDDASRAVSFYCDLIARAALDGIARQQGTMGVD 257 >gi|13470846|ref|NP_102415.1| 30S ribosomal protein S2 [Mesorhizobium loti MAFF303099] gi|25009218|sp|Q98MB2|RS2_RHILO RecName: Full=30S ribosomal protein S2 gi|14021589|dbj|BAB48201.1| 30S ribosomal protein S2 [Mesorhizobium loti MAFF303099] Length = 260 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 201/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G+ FGH+ WNPKM YI+ RNN HIIDLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QG TKKERLN++R+R+KL +AL GI+DMG PDLMFV+DTN+E +AI EA+RL Sbjct: 121 EMLAGEAQGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAIAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +D+ IPGNDD++R+I L+CDL+A AAIDGIARQ +G D ++ Sbjct: 181 GIPVVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGVDIGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 VEAPV 245 >gi|260459211|ref|ZP_05807466.1| ribosomal protein S2 [Mesorhizobium opportunistum WSM2075] gi|259034765|gb|EEW36021.1| ribosomal protein S2 [Mesorhizobium opportunistum WSM2075] Length = 260 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 201/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G+ FGH+ WNPKM YI+ RNN HIIDLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QG TKKERLN++R+R+KL +AL GI+DMG PDLMFV+DTN+E +AI EA+RL Sbjct: 121 EMLAGEAQGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAIAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +D+ IPGNDD++R+I L+CDL+A AAIDGIARQ +G D ++ Sbjct: 181 GIPVVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGVDIGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 VEAPV 245 >gi|319783674|ref|YP_004143150.1| ribosomal protein S2 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169562|gb|ADV13100.1| ribosomal protein S2 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 262 Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 201/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G+ FGH+ WNPKM YI+ RNN HIIDLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QG TKKERLN++R+R+KL +AL GI+DMG PDLMFV+DTN+E +AI EA+RL Sbjct: 121 EMLAGEAQGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAIAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +D+ IPGNDD++R+I L+CDL+A AAIDGIARQ +G D ++ Sbjct: 181 GIPVVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGVDIGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 IEAPV 245 >gi|240850304|ref|YP_002971697.1| 30S ribosomal protein S2 [Bartonella grahamii as4aup] gi|240267427|gb|ACS51015.1| 30S ribosomal protein S2 [Bartonella grahamii as4aup] Length = 259 Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 155/236 (65%), Positives = 197/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+FV+DTN+E +A+QEA+RL Sbjct: 121 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTNKENIALQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++A++DTN +PD V + IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D Sbjct: 181 GIPVIAIIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGID 236 >gi|304391645|ref|ZP_07373587.1| 30S ribosomal protein S2 [Ahrensia sp. R2A130] gi|303295874|gb|EFL90232.1| 30S ribosomal protein S2 [Ahrensia sp. R2A130] Length = 378 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 152/242 (62%), Positives = 201/242 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HI+DLSQTVP++ +AL+ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQAHRWNPKMDPYIFGKRNNIHILDLSQTVPLMHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK AS+ V +AA+RSAQY VN++WLGGM+TNWKT+S SI++LR+LE Sbjct: 61 DTVARGGRVLFVGTKRTASEAVADAARRSAQYYVNARWLGGMLTNWKTISNSIKRLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL + +TKKE LN+ R+RDKL+RAL GI+DMGG PDL+FV+DTN+E +AIQEA++L Sbjct: 121 ELLTADQSSYTKKELLNLTRERDKLERALGGIKDMGGTPDLIFVIDTNKEAIAIQEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+ AV+D+NS+ D +D+ IPGNDD+SR++AL+CDL+A A IDGIARQ G D + Sbjct: 181 KIPVCAVLDSNSSTDNIDFPIPGNDDASRAVALYCDLIAKACIDGIARQQGSSGVDLGAQ 240 Query: 241 GE 242 E Sbjct: 241 AE 242 >gi|163868101|ref|YP_001609305.1| 30S ribosomal protein S2 [Bartonella tribocorum CIP 105476] gi|161017752|emb|CAK01310.1| 30S ribosomal protein S2 [Bartonella tribocorum CIP 105476] Length = 296 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 154/236 (65%), Positives = 197/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 31 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 90 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QAS+ + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 91 DTVARGGRILFVGTKRQASEIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 150 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+FV+DTN+E +A+QEA+RL Sbjct: 151 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTNKENIALQEAKRL 210 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++A++DTN +PD V + IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D Sbjct: 211 GIPVIAIIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGID 266 >gi|209573723|sp|A9ISJ8|RS2_BART1 RecName: Full=30S ribosomal protein S2 Length = 266 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 154/236 (65%), Positives = 197/236 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QAS+ + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASEIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+FV+DTN+E +A+QEA+RL Sbjct: 121 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTNKENIALQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++A++DTN +PD V + IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D Sbjct: 181 GIPVIAIIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGID 236 >gi|158423317|ref|YP_001524609.1| 30S ribosomal protein S2 [Azorhizobium caulinodans ORS 571] gi|172047939|sp|A8I460|RS2_AZOC5 RecName: Full=30S ribosomal protein S2 gi|158330206|dbj|BAF87691.1| ribosomal protein S2 [Azorhizobium caulinodans ORS 571] Length = 333 Score = 344 bits (882), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 159/255 (62%), Positives = 203/255 (79%), Gaps = 4/255 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH++ WNPKM +YIF RNN HIIDLSQTVP L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQSHRWNPKMSQYIFGVRNNIHIIDLSQTVPALHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AA+RSAQY VNS+WLGGM+TNWKT+S SI +L+ LE Sbjct: 61 DTVAQGGRVLFVGTKRQAQDQVADAARRSAQYYVNSRWLGGMLTNWKTISNSIARLKKLE 120 Query: 121 ELLNKENQ-GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ Q G+TKKERL + R+++KL+RAL GIRDMGGLPDL+FV+DTN+E +A++EA+R Sbjct: 121 EMLSGPEQGGYTKKERLTLSREKEKLERALGGIRDMGGLPDLLFVIDTNKEDIAVKEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++DTNS+PD + Y +PGNDD+ R+I L+CDLVA AAIDGI R H +G D Sbjct: 181 LGIPVAAILDTNSDPDGITYPVPGNDDAGRAIQLYCDLVARAAIDGIGRGHVDLGVDL-- 238 Query: 240 AGETVVHSKEGMQLE 254 GET EG+ E Sbjct: 239 -GETEAPLSEGLPAE 252 >gi|75676050|ref|YP_318471.1| 30S ribosomal protein S2 [Nitrobacter winogradskyi Nb-255] gi|123773231|sp|Q3SRH2|RS2_NITWN RecName: Full=30S ribosomal protein S2 gi|74420920|gb|ABA05119.1| SSU ribosomal protein S2P [Nitrobacter winogradskyi Nb-255] Length = 332 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 155/245 (63%), Positives = 198/245 (80%), Gaps = 1/245 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L ALQ +S Sbjct: 1 MAIPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLLHHALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVARGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDLMFV+DTN+E +AIQEA+R Sbjct: 121 EVLNSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLMFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYIVPGNDDAGRAISLYCDLIARAAIDGISRAQGESGIDVGA 240 Query: 240 AGETV 244 + + V Sbjct: 241 SVQPV 245 >gi|220921690|ref|YP_002496991.1| 30S ribosomal protein S2 [Methylobacterium nodulans ORS 2060] gi|254764484|sp|B8IQY6|RS2_METNO RecName: Full=30S ribosomal protein S2 gi|219946296|gb|ACL56688.1| ribosomal protein S2 [Methylobacterium nodulans ORS 2060] Length = 349 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 152/244 (62%), Positives = 199/244 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G FGH+ WNPKM+ YIF RNN HIIDL+QTVP L +ALQ +S Sbjct: 1 MALPDFSMRQLLEAGAHFGHQAHRWNPKMQSYIFGTRNNIHIIDLAQTVPALYQALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+D V E+A+RSAQY VNS+WLGG +TNWKT+S SIQ+LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAADVVAESARRSAQYFVNSRWLGGTLTNWKTISGSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L QG TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL Sbjct: 121 EILAGGGQGLTKKERLMLSREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTNS+PD + YV+P NDD+ R+IAL+CDL+A AAIDGI+R +G D ++ Sbjct: 181 GIPVAAIVDTNSDPDGITYVVPANDDAGRAIALYCDLIARAAIDGISRGQGALGMDLGAS 240 Query: 241 GETV 244 E + Sbjct: 241 EEPL 244 >gi|299135001|ref|ZP_07028192.1| ribosomal protein S2 [Afipia sp. 1NLS2] gi|298589978|gb|EFI50182.1| ribosomal protein S2 [Afipia sp. 1NLS2] Length = 332 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 157/237 (66%), Positives = 193/237 (81%), Gaps = 1/237 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L +ALQ +S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V EAAKRSAQY VNS+WLGG +TNWKTVS SI++LR LE Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVAEAAKRSAQYFVNSRWLGGTLTNWKTVSGSIKRLRQLE 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L E +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EMLGSAEGNQYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IP+ A+VDTN +P + YV+PGNDD+ R+IAL+CDL+A AAIDGI+R G D Sbjct: 181 LNIPVAAIVDTNCDPKGITYVVPGNDDAGRAIALYCDLIARAAIDGISRGQGDAGID 237 >gi|163760883|ref|ZP_02167962.1| putative 30S ribosomal protein S2 [Hoeflea phototrophica DFL-43] gi|162281927|gb|EDQ32219.1| putative 30S ribosomal protein S2 [Hoeflea phototrophica DFL-43] Length = 262 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 152/229 (66%), Positives = 193/229 (84%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ +IF RNN HI+DL QTVPML +AL+++SDTV++GG Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPFIFGARNNLHILDLGQTVPMLNQALKLVSDTVSKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QAS+ V +AA RSAQY VN++WLGGM+TNWKT+S SIQ+LR L+E+L E Sbjct: 61 RVLFVGTKRQASEIVADAASRSAQYYVNARWLGGMLTNWKTISHSIQRLRKLDEILQAEA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMFV+DTN+E +AIQEA+RL IP+VA+ Sbjct: 121 SGFTKKERLNLEREREKLDRALGGIRDMGGTPDLMFVIDTNKEGIAIQEAKRLGIPVVAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +D+N +PD+VDY IPGNDD+SR+I+L+CDL++ A IDGIARQ G D Sbjct: 181 IDSNCDPDVVDYPIPGNDDASRAISLYCDLISRACIDGIARQQGASGVD 229 >gi|146341069|ref|YP_001206117.1| 30S ribosomal protein S2 [Bradyrhizobium sp. ORS278] gi|166225244|sp|A4YVG6|RS2_BRASO RecName: Full=30S ribosomal protein S2 gi|146193875|emb|CAL77892.1| 30S ribosomal protein S2 [Bradyrhizobium sp. ORS278] Length = 329 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 158/268 (58%), Positives = 205/268 (76%), Gaps = 10/268 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L ALQ +S Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHTALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKR AQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDNVADAAKRCAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ E +TKKERL ++R+RDKL R+L GI+DMGGLPD++FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGEANSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDMIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + YV+PGNDD+ R+I+L+CDL+A AAIDGI+R +G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYVVPGNDDAGRAISLYCDLIARAAIDGISRAQGELGIDVGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + LEED ++ +S G Sbjct: 241 SAAP---------LEEDLPAASASTFQG 259 >gi|85716996|ref|ZP_01047959.1| 30S ribosomal protein S2 [Nitrobacter sp. Nb-311A] gi|85696198|gb|EAQ34093.1| 30S ribosomal protein S2 [Nitrobacter sp. Nb-311A] Length = 332 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 153/245 (62%), Positives = 199/245 (81%), Gaps = 1/245 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP++ +ALQ +S Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLMHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYIVPGNDDAGRAISLYCDLIARAAIDGISRAQGDSGIDVGA 240 Query: 240 AGETV 244 + E V Sbjct: 241 SVEPV 245 >gi|312114733|ref|YP_004012329.1| ribosomal protein S2 [Rhodomicrobium vannielii ATCC 17100] gi|311219862|gb|ADP71230.1| ribosomal protein S2 [Rhodomicrobium vannielii ATCC 17100] Length = 351 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 151/242 (62%), Positives = 195/242 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LPQFT+RQLLE+GV FGH+ WNPKM Y+F RN HIIDLS+TVP+L +A+ S Sbjct: 1 MTLPQFTMRQLLEAGVHFGHQTHRWNPKMSDYLFGTRNKIHIIDLSKTVPLLHQAVVTAS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA+GGRILFV TK QASD V +AAKRSAQY VN +WLGGM+TNWKT++ SI++LR L+ Sbjct: 61 DVVAQGGRILFVGTKRQASDAVADAAKRSAQYYVNHRWLGGMLTNWKTITNSIKRLRYLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L++ E QGFTKKE LN+ R+RDKL++ L GI+DMGG+PDL+FV+DTN+E +AIQEA++L Sbjct: 121 DLVSGEGQGFTKKELLNLTRERDKLEQELGGIKDMGGVPDLLFVIDTNKESIAIQEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP++A++D+NSNPD V+Y IPGNDD+ R+I L+CDL++ AAIDGI R G D A Sbjct: 181 KIPVIAIIDSNSNPDGVNYPIPGNDDAGRAITLYCDLISRAAIDGIERAQGVSGIDIGEA 240 Query: 241 GE 242 E Sbjct: 241 EE 242 >gi|209885084|ref|YP_002288941.1| ribosomal protein S2 [Oligotropha carboxidovorans OM5] gi|229470518|sp|B6JH66|RS2_OLICO RecName: Full=30S ribosomal protein S2 gi|209873280|gb|ACI93076.1| ribosomal protein S2 [Oligotropha carboxidovorans OM5] Length = 332 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 155/240 (64%), Positives = 193/240 (80%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM +IF RNN HIIDL+QTVP++ +ALQ +S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQAHRWNPKMADFIFGARNNIHIIDLAQTVPLMHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKTVS SI++LR LE Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTVSGSIRRLRQLE 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L E +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EMLGSAEGSQYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + YV+PGNDD+ R+IAL+CDL+A AAIDGI+R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYVVPGNDDAGRAIALYCDLIARAAIDGISRAQGDAGIDVGA 240 >gi|170742936|ref|YP_001771591.1| 30S ribosomal protein S2 [Methylobacterium sp. 4-46] gi|238688055|sp|B0UCS0|RS2_METS4 RecName: Full=30S ribosomal protein S2 gi|168197210|gb|ACA19157.1| ribosomal protein S2 [Methylobacterium sp. 4-46] Length = 349 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 150/244 (61%), Positives = 199/244 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G FGH++ WNPKM+ +IF RNN HIIDL+QTVP L +ALQ +S Sbjct: 1 MALPDFSMRQLLEAGAHFGHQSHRWNPKMQPFIFGTRNNIHIIDLAQTVPALYQALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+D V ++A+RSAQY VNS+WLGG +TNWKT+S SIQ+LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAADVVADSARRSAQYFVNSRWLGGTLTNWKTISGSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L QG TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL Sbjct: 121 EVLAGGGQGLTKKERLMLSREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTN +PD + YV+P NDD+ R+IAL+CDL+A AAIDGI+R +G D ++ Sbjct: 181 GIPVAAIVDTNCDPDGITYVVPANDDAGRAIALYCDLIARAAIDGISRGQGALGLDIGAS 240 Query: 241 GETV 244 E V Sbjct: 241 EEPV 244 >gi|148255870|ref|YP_001240455.1| 30S ribosomal protein S2 [Bradyrhizobium sp. BTAi1] gi|166225243|sp|A5EK55|RS2_BRASB RecName: Full=30S ribosomal protein S2 gi|146408043|gb|ABQ36549.1| SSU ribosomal protein S2P [Bradyrhizobium sp. BTAi1] Length = 330 Score = 337 bits (865), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 152/237 (64%), Positives = 194/237 (81%), Gaps = 1/237 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L ALQ +S Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHTALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKR AQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDNVADAAKRCAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ E +TKKERL ++R+RDKL R+L GI+DMGGLPD++FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGEANSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDMIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IP+ A+VDTN +P + YV+PGNDD+ R+I+L+CDL+A AAIDGI+R +G D Sbjct: 181 LNIPVAAIVDTNCDPKGITYVVPGNDDAGRAISLYCDLIARAAIDGISRAQGELGID 237 >gi|90423936|ref|YP_532306.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris BisB18] gi|123089656|sp|Q215E9|RS2_RHOPB RecName: Full=30S ribosomal protein S2 gi|90105950|gb|ABD87987.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris BisB18] Length = 334 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 151/241 (62%), Positives = 195/241 (80%), Gaps = 1/241 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L +ALQ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V EAAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDGVAEAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EVLNSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I L+CDL+A A IDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYLVPGNDDAGRAITLYCDLIARAVIDGISRAQGDSGFDIGA 240 Query: 240 A 240 + Sbjct: 241 S 241 >gi|115524560|ref|YP_781471.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris BisA53] gi|122296190|sp|Q07NJ3|RS2_RHOP5 RecName: Full=30S ribosomal protein S2 gi|115518507|gb|ABJ06491.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris BisA53] Length = 330 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 150/240 (62%), Positives = 194/240 (80%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L AL+ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLLHNALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDVVADAAKRSAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELLNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LN + G +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EMLNSGDAGSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLLFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I L+CDLVA A IDG++R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGISYLVPGNDDAGRAITLYCDLVARAVIDGLSRAQGDSGYDAGA 240 >gi|92117241|ref|YP_576970.1| 30S ribosomal protein S2 [Nitrobacter hamburgensis X14] gi|123265289|sp|Q1QMN7|RS2_NITHX RecName: Full=30S ribosomal protein S2 gi|91800135|gb|ABE62510.1| SSU ribosomal protein S2P [Nitrobacter hamburgensis X14] Length = 332 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 152/245 (62%), Positives = 199/245 (81%), Gaps = 1/245 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L +ALQ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYLVPGNDDAGRAISLYCDLIARAAIDGISRAQGDSGIDIGA 240 Query: 240 AGETV 244 + + V Sbjct: 241 SVQPV 245 >gi|27379972|ref|NP_771501.1| 30S ribosomal protein S2 [Bradyrhizobium japonicum USDA 110] gi|81736819|sp|Q89KP3|RS2_BRAJA RecName: Full=30S ribosomal protein S2 gi|27353125|dbj|BAC50126.1| 30S ribosomal protein S2 [Bradyrhizobium japonicum USDA 110] Length = 331 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 152/237 (64%), Positives = 192/237 (81%), Gaps = 1/237 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH++ WNPKM +IF RNN HI+DL+QTVPML ALQ +S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQSHRWNPKMAPFIFGTRNNIHIVDLAQTVPMLHHALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKR AQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRCAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++L E +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLAGGEANSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IP+ A+VDTNS+P + YV+PGNDD+ R+I+L+CDL+A AAIDGI+R G D Sbjct: 181 LNIPVAAIVDTNSDPKGITYVVPGNDDAGRAISLYCDLIARAAIDGISRAQGDSGID 237 >gi|182679184|ref|YP_001833330.1| 30S ribosomal protein S2 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635067|gb|ACB95841.1| ribosomal protein S2 [Beijerinckia indica subsp. indica ATCC 9039] Length = 361 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 153/266 (57%), Positives = 205/266 (77%), Gaps = 3/266 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++R LLESG FGH+ WNPKM YIF RNN HIIDL+QTVP+L +AL+ IS Sbjct: 26 MSLPEFSMRGLLESGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKAIS 85 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA + + +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 86 DTVARGGRVLFVGTKRQAQEAIADAAQRSAQYYVNSRWLGGMLTNWKTISASIQRLRKLD 145 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L G TKKERL + R+RDKL++AL GI+DMGG+PDL+FV+DTN+E+LAIQEA RL Sbjct: 146 EILASGAGGLTKKERLMMSRERDKLEKALGGIKDMGGVPDLIFVIDTNKEQLAIQEAERL 205 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD + Y IPGNDD+ R+I+L+CDL+A AA+DGI+R G D A Sbjct: 206 HIPVAAILDTNCDPDGITYPIPGNDDAGRAISLYCDLIARAALDGISRSQGMGGFD---A 262 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 GE ++ +E + +++ + + + Sbjct: 263 GELEAPVEDLPPVEGEYEAAPTEIFE 288 >gi|209573724|sp|B2IGT0|RS2_BEII9 RecName: Full=30S ribosomal protein S2 Length = 336 Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 153/266 (57%), Positives = 205/266 (77%), Gaps = 3/266 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++R LLESG FGH+ WNPKM YIF RNN HIIDL+QTVP+L +AL+ IS Sbjct: 1 MSLPEFSMRGLLESGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA + + +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQAQEAIADAAQRSAQYYVNSRWLGGMLTNWKTISASIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L G TKKERL + R+RDKL++AL GI+DMGG+PDL+FV+DTN+E+LAIQEA RL Sbjct: 121 EILASGAGGLTKKERLMMSRERDKLEKALGGIKDMGGVPDLIFVIDTNKEQLAIQEAERL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD + Y IPGNDD+ R+I+L+CDL+A AA+DGI+R G D A Sbjct: 181 HIPVAAILDTNCDPDGITYPIPGNDDAGRAISLYCDLIARAALDGISRSQGMGGFD---A 237 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 GE ++ +E + +++ + + + Sbjct: 238 GELEAPVEDLPPVEGEYEAAPTEIFE 263 >gi|170749850|ref|YP_001756110.1| 30S ribosomal protein S2 [Methylobacterium radiotolerans JCM 2831] gi|209573668|sp|B1LTQ8|RS2_METRJ RecName: Full=30S ribosomal protein S2 gi|170656372|gb|ACB25427.1| ribosomal protein S2 [Methylobacterium radiotolerans JCM 2831] Length = 355 Score = 334 bits (856), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 154/271 (56%), Positives = 205/271 (75%), Gaps = 4/271 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++RQLLE+G FGH+ WNPKM+ YIF RNN HIIDL+QTVP + +ALQ +SDTVA+ Sbjct: 5 FSMRQLLEAGAHFGHQAHRWNPKMQPYIFGTRNNIHIIDLAQTVPAMHQALQAVSDTVAK 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GGR+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SI +LR + E L Sbjct: 65 GGRVLFVGTKRQAADTIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSISRLRKVTETLET 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 G TKKERL + R+++KL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA RL IP+ Sbjct: 125 GGPGLTKKERLMLSREKEKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEANRLGIPVA 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A+VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAIDGI+R G D ++ E + Sbjct: 185 AIVDTNCNPDGISYIVPANDDAGRAIALYCDLIAKAAIDGISRAQGSSGMDLGASEEPMA 244 Query: 246 HSKEGMQLEEDSQ-SSESSVLDGQEVAVVPE 275 E + +D+ + ES LD +VA++ E Sbjct: 245 ---EELPANDDAAVTVESDALDPADVAMLAE 272 >gi|163851497|ref|YP_001639540.1| 30S ribosomal protein S2 [Methylobacterium extorquens PA1] gi|218530304|ref|YP_002421120.1| 30S ribosomal protein S2 [Methylobacterium chloromethanicum CM4] gi|209573661|sp|A9W4G3|RS2_METEP RecName: Full=30S ribosomal protein S2 gi|254764483|sp|B7KZG0|RS2_METC4 RecName: Full=30S ribosomal protein S2 gi|163663102|gb|ABY30469.1| ribosomal protein S2 [Methylobacterium extorquens PA1] gi|218522607|gb|ACK83192.1| ribosomal protein S2 [Methylobacterium chloromethanicum CM4] Length = 355 Score = 334 bits (856), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 148/237 (62%), Positives = 191/237 (80%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++RQLLE+G FGH++ WNPKM+ YIF RNN HIIDL+QTVP L ALQ +SDTVAR Sbjct: 5 FSMRQLLEAGAHFGHQSHRWNPKMQPYIFGTRNNIHIIDLAQTVPALHAALQAVSDTVAR 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GGR+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SIQ+LR ++E L Sbjct: 65 GGRVLFVGTKRQAADSIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSIQRLRKVDETLEG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 G TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL IP+ Sbjct: 125 GAVGLTKKERLMLTREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAQRLGIPVA 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 A+VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAI+GI R +G D ++ E Sbjct: 185 AIVDTNCNPDGISYIVPANDDAGRAIALYCDLIARAAIEGIGRGQGALGLDVGASEE 241 >gi|323137304|ref|ZP_08072382.1| ribosomal protein S2 [Methylocystis sp. ATCC 49242] gi|322397291|gb|EFX99814.1| ribosomal protein S2 [Methylocystis sp. ATCC 49242] Length = 338 Score = 334 bits (856), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 151/236 (63%), Positives = 191/236 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+R LLE+G FGH+ WNPKM YIF RNN HIIDL+QTVP+L +AL+ +S Sbjct: 1 MALPDFTMRGLLEAGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKTVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D + +AAKRSAQY +NS+WLGG +TNWKT+S SI +LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDQIADAAKRSAQYYINSRWLGGTLTNWKTISGSINRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L+ G TKKERL + R+RDKL++AL GIRDMGG PDL+FV+DTN+E+LAI+EA RL Sbjct: 121 EMLSAGASGVTKKERLLLTRERDKLEKALGGIRDMGGTPDLIFVIDTNKEQLAIKEANRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +IP+VAV+DTN +PD V + IPGNDD+ R+IAL+CDL+A AAIDGI+R +G D Sbjct: 181 KIPVVAVLDTNCDPDGVTHPIPGNDDAGRAIALYCDLIARAAIDGISRSQGSLGVD 236 >gi|154248359|ref|YP_001419317.1| 30S ribosomal protein S2 [Xanthobacter autotrophicus Py2] gi|238686807|sp|A7INR6|RS2_XANP2 RecName: Full=30S ribosomal protein S2 gi|154162444|gb|ABS69660.1| ribosomal protein S2 [Xanthobacter autotrophicus Py2] Length = 334 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 150/241 (62%), Positives = 195/241 (80%), Gaps = 2/241 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH++ WNPKM YIF RNN HIIDLSQTVP L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQSHRWNPKMAPYIFGVRNNIHIIDLSQTVPALHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + V +AA+RSAQY VNS+WLGGM+TNWKT+S SI +L+ LE Sbjct: 61 DTVAQGGRVLFVGTKRQAQEQVADAARRSAQYYVNSRWLGGMLTNWKTISNSIARLKKLE 120 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E+L+ Q G+TKKERL + R++DKL +AL GIRDMGGLPDL+FV+DTN+E +A++EA+ Sbjct: 121 EMLSGPEQGSGYTKKERLTLSREKDKLDKALGGIRDMGGLPDLLFVIDTNKEDIAVKEAQ 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 RL IP+ A++DTN +PD + + +PGNDD+ R+I L+C+LVA AAIDGI R HS +G D Sbjct: 181 RLGIPVAAILDTNCDPDGIAFPVPGNDDAGRAIQLYCELVARAAIDGIGRGHSDLGIDVG 240 Query: 239 S 239 + Sbjct: 241 A 241 >gi|296445471|ref|ZP_06887428.1| ribosomal protein S2 [Methylosinus trichosporium OB3b] gi|296257037|gb|EFH04107.1| ribosomal protein S2 [Methylosinus trichosporium OB3b] Length = 351 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 154/262 (58%), Positives = 203/262 (77%), Gaps = 1/262 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+R LLESG FGH++ WNPKM +IF RNN HIIDL+QTVP+L +AL+V+S Sbjct: 1 MALPDFTMRGLLESGAHFGHQSHRWNPKMAPFIFGARNNIHIIDLAQTVPLLHQALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA D + +AA+RSAQY +NS+WLGG +TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQAQDQIADAARRSAQYYINSRWLGGTLTNWKTISGSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKERL + R+++KL++AL GI+DMGG PDL+FV+DTN+E+LAI+EA RL Sbjct: 121 EQLSVGSGGVTKKERLLLTREKEKLEKALGGIKDMGGTPDLLFVIDTNKEQLAIKEAGRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD + Y IPGNDD+ R+IAL+CDL+A AAIDGI+R G D + Sbjct: 181 KIPVVAILDTNCDPDGITYPIPGNDDAGRAIALYCDLIARAAIDGISRSQGLSGMDIGAM 240 Query: 241 GETVVHSKEGMQLEEDSQSSES 262 + G + ED +S E+ Sbjct: 241 EAPMAEPALGT-VHEDLRSPET 261 >gi|298291822|ref|YP_003693761.1| ribosomal protein S2 [Starkeya novella DSM 506] gi|296928333|gb|ADH89142.1| ribosomal protein S2 [Starkeya novella DSM 506] Length = 333 Score = 331 bits (849), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 156/246 (63%), Positives = 198/246 (80%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH++ WNPKM +IF RNN HIIDL+QTVP L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQSHRWNPKMAPFIFGTRNNIHIIDLAQTVPALHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA+D V +AAKRSAQY VNS+WLGGM+TNWKT+S SI +L+ LE Sbjct: 61 DTVARGGRVLFVGTKRQAADAVADAAKRSAQYYVNSRWLGGMLTNWKTISHSIARLKKLE 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ELLN E G+TKKERL ++R+++KL RAL GIRDMGG+PDL+FV+DTN+E LA+ EARR Sbjct: 121 ELLNAGEGVGYTKKERLTLQREKEKLDRALGGIRDMGGIPDLLFVIDTNKEDLAVAEARR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++DTNS+PD + + +PGNDD+ R+I L+CDLVA AAIDGI R +G D + Sbjct: 181 LGIPVAAILDTNSDPDGIAFPVPGNDDAGRAINLYCDLVARAAIDGIGRAQGDLGIDVGA 240 Query: 240 AGETVV 245 A +V Sbjct: 241 AEAPLV 246 >gi|240138663|ref|YP_002963135.1| 30S ribosomal protein S2 [Methylobacterium extorquens AM1] gi|254561260|ref|YP_003068355.1| 30S ribosomal protein S2 [Methylobacterium extorquens DM4] gi|240008632|gb|ACS39858.1| 30S ribosomal protein S2 [Methylobacterium extorquens AM1] gi|254268538|emb|CAX24495.1| 30S ribosomal protein S2 [Methylobacterium extorquens DM4] Length = 349 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 147/235 (62%), Positives = 189/235 (80%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+G FGH++ WNPKM+ YIF RNN HIIDL+QTVP L ALQ +SDTVARGG Sbjct: 1 MRQLLEAGAHFGHQSHRWNPKMQPYIFGTRNNIHIIDLAQTVPALHAALQAVSDTVARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SIQ+LR ++E L Sbjct: 61 RVLFVGTKRQAADSIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSIQRLRKVDETLEGGA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 G TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL IP+ A+ Sbjct: 121 VGLTKKERLMLTREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAQRLGIPVAAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAI+GI R +G D ++ E Sbjct: 181 VDTNCNPDGISYIVPANDDAGRAIALYCDLIARAAIEGIGRGQGALGLDVGASEE 235 >gi|154253635|ref|YP_001414459.1| 30S ribosomal protein S2 [Parvibaculum lavamentivorans DS-1] gi|171769680|sp|A7HY19|RS2_PARL1 RecName: Full=30S ribosomal protein S2 gi|154157585|gb|ABS64802.1| ribosomal protein S2 [Parvibaculum lavamentivorans DS-1] Length = 253 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 146/245 (59%), Positives = 196/245 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKME ++F +RNN HIIDL+QTVP+L +AL + Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMEPFLFGDRNNIHIIDLAQTVPLLHQALVTVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK QASD V AA++ AQY +N +WLGGM+TNWKT+S SI++LR L+ Sbjct: 61 DVVAGGGRVLFVGTKRQASDPVAAAARQCAQYYINHRWLGGMLTNWKTISNSIRRLRQLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E +G TKKE LN+ R+RDKL+RA+ GI+DMGGLPDL+FV+DTN+E++AIQEAR+L Sbjct: 121 EMLAGEAKGLTKKEVLNLTRERDKLERAIGGIKDMGGLPDLIFVIDTNKEEIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 I +VA++D+NSNPD + + +PGNDD++R+I+L+CDLV+ A IDGI++ S G D + Sbjct: 181 GIAVVAILDSNSNPDGIAFPVPGNDDAARAISLYCDLVSRAVIDGISQSQSASGVDVGAE 240 Query: 241 GETVV 245 E V Sbjct: 241 AEPAV 245 >gi|307942142|ref|ZP_07657493.1| ribosomal protein S2 [Roseibium sp. TrichSKD4] gi|307774428|gb|EFO33638.1| ribosomal protein S2 [Roseibium sp. TrichSKD4] Length = 263 Score = 327 bits (839), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 149/244 (61%), Positives = 192/244 (78%), Gaps = 1/244 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNP+M +YIF RN+ HI+DLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQKHRWNPRMGQYIFGVRNDVHILDLSQTVPLLHQALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+L V TK QA + V A+ SAQY VN++WLGGM+TNWKT+SQSIQ+LR LE Sbjct: 61 DTVAGGGRVLIVGTKRQAQEAVASGARNSAQYFVNARWLGGMLTNWKTISQSIQRLRKLE 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E LN + TKKERL ++R+R+KL+R L GI+DMGG+PDL+FV+DTNRE +AIQEARR Sbjct: 121 ETLNSDQANALTKKERLFMDREREKLERNLGGIKDMGGIPDLLFVIDTNREAIAIQEARR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++DTNSNP + Y +PGNDD+ R+IAL+CDL+A AAIDGI+R G D + Sbjct: 181 LGIPVAAILDTNSNPYGITYPVPGNDDAGRAIALYCDLIARAAIDGISRAQCAAGVDVGA 240 Query: 240 AGET 243 + E Sbjct: 241 SEEA 244 >gi|328543711|ref|YP_004303820.1| 30S ribosomal protein S2 [polymorphum gilvum SL003B-26A1] gi|326413455|gb|ADZ70518.1| 30S ribosomal protein S2 [Polymorphum gilvum SL003B-26A1] Length = 266 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 153/267 (57%), Positives = 205/267 (76%), Gaps = 6/267 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNP+M YIF RN+ HIIDL+QTVP+L +AL+ +S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQKHRWNPRMAPYIFGVRNDIHIIDLAQTVPLLHQALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+L V TK QA + V AA+ SAQY VN++WLGGM+TNWKT+S SIQ+LR LE Sbjct: 61 DTVAGGGRVLLVGTKRQAQESVAGAARNSAQYFVNARWLGGMLTNWKTISGSIQRLRKLE 120 Query: 121 ELLNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L+ + G TKKERL ++R+R+KL+R L GI+DMGGLPDL+FV+DTNRE +AIQEARR Sbjct: 121 ETLSTDAAGLLTKKERLFMDREREKLERNLGGIKDMGGLPDLIFVIDTNREAIAIQEARR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++D+N +PD + Y +PGNDD+ R+I L+CDL+A AAIDGI+R MG D + Sbjct: 181 LGIPVAAILDSNCDPDGITYPVPGNDDAGRAITLYCDLIARAAIDGISRAQGNMGMDIGA 240 Query: 240 AG----ETVVHSKEGMQLEEDSQSSES 262 + ETV+ + EG ++ + ++++ Sbjct: 241 SEVAPVETVL-ADEGAEVASEETATDA 266 >gi|119386434|ref|YP_917489.1| 30S ribosomal protein S2 [Paracoccus denitrificans PD1222] gi|209573674|sp|A1B8E9|RS2_PARDP RecName: Full=30S ribosomal protein S2 gi|119377029|gb|ABL71793.1| SSU ribosomal protein S2P [Paracoccus denitrificans PD1222] Length = 261 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 145/236 (61%), Positives = 189/236 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNP+M +I+ ERN HI+DL+QTVPML ALQV+ Sbjct: 3 MALPEFSMRQLLEAGVHYGHQTQRWNPRMAEFIYGERNGIHIVDLTQTVPMLDAALQVVR 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA V +AA+RSAQ+ +N +WLGG +TNWKTVSQSIQ+L+ L+ Sbjct: 63 DTVAKGGRVLFVGTKRQAQKAVADAAERSAQFYMNHRWLGGTLTNWKTVSQSIQRLKALD 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L +G TKKERL +ER++ KL+ +L GIR+MGGLPDL+FV+D N+E LAI EA++L Sbjct: 123 ETLGSGAEGLTKKERLQMEREQAKLQASLGGIREMGGLPDLLFVIDVNKEDLAIAEAKKL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +P VDYVIPGNDD++R+IAL+CDLV+ AA+DG+ Q G D Sbjct: 183 GIPVVAVVDTNCSPKGVDYVIPGNDDAARAIALYCDLVSRAALDGMTAQMGAAGVD 238 >gi|316933921|ref|YP_004108903.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris DX-1] gi|315601635|gb|ADU44170.1| ribosomal protein S2 [Rhodopseudomonas palustris DX-1] Length = 331 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 157/268 (58%), Positives = 207/268 (77%), Gaps = 10/268 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++RQLLE+GV FGH++ WNPKM YIF RNN HI+DL+QTVPML +ALQ IS Sbjct: 1 MSLPEFSMRQLLEAGVHFGHQSHRWNPKMADYIFGVRNNIHIVDLTQTVPMLHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR LE Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIRRLRHLE 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLSSADANAYTKKERLELQRERDKLNRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+IAL+CDLVA A IDGI+R +G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLVARAVIDGISRAQGDVGIDIGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + L ED ++++S G Sbjct: 241 ASQP---------LREDLPAAQASSFQG 259 >gi|217977856|ref|YP_002362003.1| 30S ribosomal protein S2 [Methylocella silvestris BL2] gi|254764485|sp|B8EKA1|RS2_METSB RecName: Full=30S ribosomal protein S2 gi|217503232|gb|ACK50641.1| ribosomal protein S2 [Methylocella silvestris BL2] Length = 349 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 151/270 (55%), Positives = 200/270 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP FT+R LL++G FGH++ WNPKME +IF RNN HIIDL+QTVP+L +AL+ +S Sbjct: 1 MSLPDFTMRSLLDAGAHFGHQSHRWNPKMEPFIFGTRNNIHIIDLAQTVPLLHQALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA D + +AA RSAQY +NS+WLGGM+TNWKT+S SIQ+LR +E Sbjct: 61 DTVARGGRVLFVGTKRQAQDAIADAAHRSAQYYINSRWLGGMLTNWKTISASIQRLRKVE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L G TKKERL + R+RDKL++AL GI++MGG+PDL+FV+DTN+E+LAI+EA RL Sbjct: 121 ETLQGGGSGLTKKERLMMSRERDKLEKALGGIKEMGGIPDLIFVIDTNKEQLAIKEAERL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN NPD + + IPGNDD+ R+IAL+CDL+A AA+DGIAR G D A Sbjct: 181 HIPVAAILDTNCNPDGITFPIPGNDDAGRAIALYCDLIARAALDGIARGQGAGGVDFGEA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + L ++ ++V + E Sbjct: 241 DQPPAEDLPAADLPAETPEPTTAVTEAYEA 270 >gi|300023429|ref|YP_003756040.1| ribosomal protein S2 [Hyphomicrobium denitrificans ATCC 51888] gi|299525250|gb|ADJ23719.1| ribosomal protein S2 [Hyphomicrobium denitrificans ATCC 51888] Length = 329 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 149/236 (63%), Positives = 188/236 (79%), Gaps = 1/236 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F +RQLLE+GV FGH+ WNPKM +I+ RN HI+DL+QTVPML +AL +S Sbjct: 1 MALPAFNMRQLLEAGVHFGHQAHRWNPKMAPFIYGSRNKIHILDLTQTVPMLHQALLKVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFVATK QASD + EAAKRSAQY +N +WLGG +TNWKTVSQSI++LR L+ Sbjct: 61 DTVAGGGRVLFVATKRQASDGIAEAAKRSAQYFINHRWLGGTLTNWKTVSQSIRRLRQLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L + QG TKKE LN+ R+RDKL ++L GI+DMGG PDL+ V+DTN+E +AIQEAR+L Sbjct: 121 DIL-ADPQGRTKKEVLNLTRERDKLNQSLGGIKDMGGTPDLLVVIDTNKESIAIQEARKL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +PD +DY +PGNDD+ R+I L+CDL+A AA+DGI R G D Sbjct: 180 NIPIVAIVDTNCDPDGIDYPVPGNDDAGRAITLYCDLMARAALDGIERAQGSSGID 235 >gi|260433686|ref|ZP_05787657.1| ribosomal protein S2 [Silicibacter lacuscaerulensis ITI-1157] gi|260417514|gb|EEX10773.1| ribosomal protein S2 [Silicibacter lacuscaerulensis ITI-1157] Length = 259 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 146/236 (61%), Positives = 187/236 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M YI+ RN HIIDL+QTVPML +ALQVI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMAPYIYGARNGIHIIDLTQTVPMLDQALQVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QAS + EAA++SAQY +N +WLGG +TNWKTVSQSIQ+L ++ Sbjct: 61 DTVAKGGRVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLNQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EAMQSGAEGLTKKERLGMERDQAKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VDYVIPGNDD++R+IAL+CDL A AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYVIPGNDDAARAIALYCDLAARAALDGMSAQLGAAGVD 236 >gi|91977327|ref|YP_569986.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris BisB5] gi|123735355|sp|Q136A4|RS2_RHOPS RecName: Full=30S ribosomal protein S2 gi|91683783|gb|ABE40085.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris BisB5] Length = 331 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 151/241 (62%), Positives = 196/241 (81%), Gaps = 1/241 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP++ +ALQ IS Sbjct: 1 MAIPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLMHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLNSGDASAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+IAL+CDL+A A IDGI+R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLIARAVIDGISRAQGDSGIDIGA 240 Query: 240 A 240 A Sbjct: 241 A 241 >gi|39935987|ref|NP_948263.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris CGA009] gi|192291640|ref|YP_001992245.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris TIE-1] gi|61215591|sp|Q6N5Q2|RS2_RHOPA RecName: Full=30S ribosomal protein S2; AltName: Full=RRP-S2 gi|229484899|sp|B3Q7K4|RS2_RHOPT RecName: Full=30S ribosomal protein S2 gi|39649841|emb|CAE28363.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris CGA009] gi|192285389|gb|ACF01770.1| ribosomal protein S2 [Rhodopseudomonas palustris TIE-1] Length = 331 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 155/268 (57%), Positives = 207/268 (77%), Gaps = 10/268 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++RQLLE+GV FGH++ WNPKM YIF RNN HI+DL+QTVP+L +ALQ IS Sbjct: 1 MSLPEFSMRQLLEAGVHFGHQSHRWNPKMADYIFGVRNNIHIVDLTQTVPLLHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR LE Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIRRLRHLE 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLSSADANAYTKKERLELQRERDKLNRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+IAL+CDLVA A IDGI+R +G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLVARAVIDGISRAQGDVGIDIGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + L ED +++++ G Sbjct: 241 AAQP---------LREDLPAAQATTFQG 259 >gi|163795642|ref|ZP_02189608.1| Ribosomal protein S2 [alpha proteobacterium BAL199] gi|159179241|gb|EDP63774.1| Ribosomal protein S2 [alpha proteobacterium BAL199] Length = 269 Score = 321 bits (823), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 147/237 (62%), Positives = 186/237 (78%), Gaps = 1/237 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH WNPKME YIF RNN HI+DL QTVPML +ALQ + DT A+GG Sbjct: 1 MRQLLEAGVHFGHHTRRWNPKMESYIFGVRNNVHILDLRQTVPMLHRALQAVRDTTAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 R+LFV TK QASD V EAAKRS QY VN +WLGGM+TNWKT+S SI++LRDLE+LL+ E Sbjct: 61 RVLFVGTKRQASDMVAEAAKRSGQYFVNHRWLGGMLTNWKTISHSIKRLRDLEDLLDSPE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + G TKKE L + R+R+KL+RAL GI++MGGLPD++FV+DTN+E LAIQEA +L IP+VA Sbjct: 121 SLGLTKKETLGLTREREKLERALGGIKEMGGLPDILFVIDTNKEALAIQEANKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 V+D+NS+PD V Y IPGNDD+ R++A +CDL+ASA +DG+ + G D + E Sbjct: 181 VLDSNSSPDGVQYGIPGNDDAMRAVATYCDLIASAVLDGLQAEMMASGDDVGESAEA 237 >gi|86749945|ref|YP_486441.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris HaA2] gi|123004092|sp|Q2IW80|RS2_RHOP2 RecName: Full=30S ribosomal protein S2 gi|86572973|gb|ABD07530.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris HaA2] Length = 331 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 150/241 (62%), Positives = 196/241 (81%), Gaps = 1/241 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP++ +ALQ IS Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLMHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLNSGDASAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A A IDGI+R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAISLYCDLIARAVIDGISRAQGESGIDIGA 240 Query: 240 A 240 + Sbjct: 241 S 241 >gi|126737740|ref|ZP_01753470.1| 30S ribosomal protein S2 [Roseobacter sp. SK209-2-6] gi|126721133|gb|EBA17837.1| 30S ribosomal protein S2 [Roseobacter sp. SK209-2-6] Length = 255 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 143/236 (60%), Positives = 189/236 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M YI+ RN HI+DL+QTVPML +ALQ++ Sbjct: 1 MALPEFTLRQLLEAGVHFGHQTQRWNPRMSTYIYGARNGIHIMDLTQTVPMLDQALQIVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRILFVGTKRQAAGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EKMESGAEGLTKKERLGMERDQQKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VD+VIPGNDD+SR+I+L+CDLVA AA+DG+ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDFVIPGNDDASRAISLYCDLVARAALDGMTAQLGAAGVD 236 >gi|254466088|ref|ZP_05079499.1| ribosomal protein S2 [Rhodobacterales bacterium Y4I] gi|206686996|gb|EDZ47478.1| ribosomal protein S2 [Rhodobacterales bacterium Y4I] Length = 257 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 143/236 (60%), Positives = 191/236 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQV+ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHIMDLTQTVPMLDQALQVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ V EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAGPVAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER ++KL+ +L GIR+MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EKMAGGAEGLTKKERLGMERDQEKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VDY+IPGNDD+SR+I+L+CDLVA AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDASRAISLYCDLVARAALDGMSAQLGAAGVD 236 >gi|304320075|ref|YP_003853718.1| 30S ribosomal protein S2 [Parvularcula bermudensis HTCC2503] gi|303298978|gb|ADM08577.1| 30S ribosomal protein S2 [Parvularcula bermudensis HTCC2503] Length = 306 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 145/236 (61%), Positives = 188/236 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M YIF +R+ HIIDLSQTVP+L +AL + Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTHRWNPRMREYIFGDRSGIHIIDLSQTVPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK QA V EAA R AQY +N++WLGG +TNW+TVS SIQ++R +E Sbjct: 61 DIVAGGGRVLFVGTKRQAQQPVAEAAGRCAQYYMNNRWLGGTLTNWETVSNSIQRMRVIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L E +GFTKKE+LN+ R+RDKL+ +L GIR+MGGLPDLMFV+D N+E +AI+EA++L Sbjct: 121 ESLEAEARGFTKKEQLNMTRERDKLELSLGGIREMGGLPDLMFVIDVNKEDIAIKEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +P+ VDY+IPGNDD+SR+I+L+C+LVA A IDG++ G D Sbjct: 181 GIPVVAVVDTNCSPEGVDYIIPGNDDASRAISLYCNLVADAVIDGLSASALEFGED 236 >gi|188581286|ref|YP_001924731.1| 30S ribosomal protein S2 [Methylobacterium populi BJ001] gi|209573667|sp|B1ZLB5|RS2_METPB RecName: Full=30S ribosomal protein S2 gi|179344784|gb|ACB80196.1| ribosomal protein S2 [Methylobacterium populi BJ001] Length = 354 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 147/237 (62%), Positives = 191/237 (80%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++RQLLE+G FGH++ WNPKM+ YIF RNN HIIDL+QTVP L ALQ +SDTVAR Sbjct: 5 FSMRQLLEAGAHFGHQSHRWNPKMQPYIFGTRNNIHIIDLAQTVPALHAALQAVSDTVAR 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GGR+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SIQ+LR ++E L Sbjct: 65 GGRVLFVGTKRQAADAIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSIQRLRKVDETLEG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 G TKKERL + R+++KL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL IP+ Sbjct: 125 GAVGLTKKERLMLTREKEKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAQRLGIPVA 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 A+VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAI+GI R +G D ++ E Sbjct: 185 AIVDTNCNPDGISYIVPANDDAGRAIALYCDLIARAAIEGIGRGQGALGIDVGASEE 241 >gi|146277550|ref|YP_001167709.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides ATCC 17025] gi|145555791|gb|ABP70404.1| SSU ribosomal protein S2P [Rhodobacter sphaeroides ATCC 17025] Length = 274 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 141/236 (59%), Positives = 192/236 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 24 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 83 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L++L+ Sbjct: 84 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKNLD 143 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 144 ELLAHGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLIFIIDVGKEDLAIAEAQKL 203 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN++P VDY+IPGNDD++R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 204 GIPVVAVVDTNNSPKGVDYIIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGID 259 >gi|209573693|sp|A4WSP0|RS2_RHOS5 RecName: Full=30S ribosomal protein S2 Length = 253 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 141/236 (59%), Positives = 192/236 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 3 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L++L+ Sbjct: 63 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKNLD 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 123 ELLAHGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLIFIIDVGKEDLAIAEAQKL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN++P VDY+IPGNDD++R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 183 GIPVVAVVDTNNSPKGVDYIIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGID 238 >gi|126462201|ref|YP_001043315.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides ATCC 17029] gi|166226745|sp|A3PJM7|RS2_RHOS1 RecName: Full=30S ribosomal protein S2 gi|126103865|gb|ABN76543.1| SSU ribosomal protein S2P [Rhodobacter sphaeroides ATCC 17029] Length = 251 Score = 318 bits (814), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 141/236 (59%), Positives = 191/236 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 1 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L+ L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKQLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 121 EVLATGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLLFIIDVGKEDLAIAEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN++P VDYVIPGNDD++R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNNSPKGVDYVIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGID 236 >gi|77463347|ref|YP_352851.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides 2.4.1] gi|221639196|ref|YP_002525458.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides KD131] gi|332558223|ref|ZP_08412545.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides WS8N] gi|123591999|sp|Q3J2N4|RS2_RHOS4 RecName: Full=30S ribosomal protein S2 gi|254764488|sp|B9KSF0|RS2_RHOSK RecName: Full=30S ribosomal protein S2 gi|77387765|gb|ABA78950.1| SSU ribosomal protein S2P [Rhodobacter sphaeroides 2.4.1] gi|221159977|gb|ACM00957.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides KD131] gi|332275935|gb|EGJ21250.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides WS8N] Length = 253 Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 141/236 (59%), Positives = 191/236 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 3 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L+ L+ Sbjct: 63 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKQLD 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 123 EVLATGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLLFIIDVGKEDLAIAEAQKL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN++P VDYVIPGNDD++R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 183 GIPVVAVVDTNNSPKGVDYVIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGID 238 >gi|83858388|ref|ZP_00951910.1| 30S ribosomal protein S2 [Oceanicaulis alexandrii HTCC2633] gi|83853211|gb|EAP91063.1| 30S ribosomal protein S2 [Oceanicaulis alexandrii HTCC2633] Length = 279 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 147/263 (55%), Positives = 201/263 (76%), Gaps = 5/263 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+ YIF ER N HIIDLSQTVPML +AL + Sbjct: 1 MALPEFSMRQLLEAGCHFGHQTHRWNPKMKEYIFGERANIHIIDLSQTVPMLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A+GGR+LFV TK QA++ + +AA R AQY +N +WLGG +TNW+T+S+SI +LR+LE Sbjct: 61 EVAAKGGRVLFVGTKRQAAEPISQAASRCAQYYMNHRWLGGTLTNWQTISKSIARLRELE 120 Query: 121 ELLNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 LL+ E G TKKE L + R+R+KL+R+L GI++MGG PDLMFV+DTN+E +AIQEA+ Sbjct: 121 SLLDAEGGPTGLTKKEILMLTREREKLERSLGGIKEMGGTPDLMFVIDTNKESIAIQEAK 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 RL IP+VAVVDTN +PD +D+ IPGNDD+SR+++L+CDL+A A +DGI+ + +G D Sbjct: 181 RLGIPVVAVVDTNCDPDPIDFPIPGNDDASRALSLYCDLIADAVLDGISDSQAALGMDL- 239 Query: 239 SAGETVVHSKEGMQLEEDSQSSE 261 GE+ + S + L+E +SE Sbjct: 240 --GESDMPSDVVLGLDEGEAASE 260 >gi|86138886|ref|ZP_01057458.1| 30S ribosomal protein S2 [Roseobacter sp. MED193] gi|85824533|gb|EAQ44736.1| 30S ribosomal protein S2 [Roseobacter sp. MED193] Length = 251 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 144/245 (58%), Positives = 191/245 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M YI+ RN HI+DL+QTVPML ++LQ++ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMAPYIYGARNGIHIMDLTQTVPMLDQSLQIVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI++L ++ Sbjct: 61 DTVAKGGRILFVGTKRQAAGPIAEAAEKSAQYFMNHRWLGGTLTNWKTVSQSIKRLNEIN 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L +G TKKERL +ER + KL+ +L GI +MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EKLEGGAEGLTKKERLGMERDQQKLQASLGGIAEMGGVPDLLFVIDVKKEALAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +PD VD+VIPGNDD+SR+I+L+CDLVA AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPDGVDFVIPGNDDASRAISLYCDLVARAALDGMSAQLGAAGVDLGAL 240 Query: 241 GETVV 245 E V Sbjct: 241 EEAPV 245 >gi|197105243|ref|YP_002130620.1| 30S ribosomal protein S2 [Phenylobacterium zucineum HLK1] gi|238690150|sp|B4RBZ4|RS2_PHEZH RecName: Full=30S ribosomal protein S2 gi|196478663|gb|ACG78191.1| 30S ribosomal protein S2 [Phenylobacterium zucineum HLK1] Length = 295 Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 139/236 (58%), Positives = 185/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM++YIF R+N HIIDLSQ++P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDKYIFGARSNIHIIDLSQSIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGRILFV TK QAS+ + AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAGGGRILFVGTKRQASEPIATAAKRCAQYYVNHRWLGGTLTNWRTVSNSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L E QG +KKE L + R+RDKL+ +L GI+DMGG+PDLMFV+DTN+E +AIQEAR+L Sbjct: 121 SVLGGEGQGRSKKELLQLTRERDKLELSLGGIKDMGGIPDLMFVIDTNKEAIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++A++DTN NPD + Y IPGNDD++R+I L+CDL+A A +DG+A + G D Sbjct: 181 NIPVIAILDTNCNPDGITYPIPGNDDAARAIQLYCDLMADAILDGLAAGQAASGVD 236 >gi|310815885|ref|YP_003963849.1| 30S ribosomal protein S2 [Ketogulonicigenium vulgare Y25] gi|308754620|gb|ADO42549.1| 30S ribosomal protein S2 [Ketogulonicigenium vulgare Y25] Length = 265 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 138/236 (58%), Positives = 189/236 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVP+L KALQV+ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTSRWNPRMGEFIYGSRNGIHILDLTQTVPLLDKALQVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA + +AA++SAQY +N +WLGG +TNW+T+SQ IQ L+ ++ Sbjct: 61 DTVARGGRVLFVGTKRQAQSAIADAAEKSAQYYINHRWLGGTLTNWQTISQRIQALKQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E ++ +G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E+LAI+EA +L Sbjct: 121 EYSDRGFEGMTKKERLGLEREQAKLQASLGGIREMGGVPDLLFVIDVNKEQLAIKEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA+VDTN +P+ VDYVIPGNDD++R+IAL+ DL+A AA+DG+ Q G D Sbjct: 181 GIPVVAIVDTNCSPEGVDYVIPGNDDAARAIALYTDLIARAALDGMDAQLGAAGVD 236 >gi|89068228|ref|ZP_01155638.1| ribosomal protein S2 [Oceanicola granulosus HTCC2516] gi|89046145|gb|EAR52203.1| ribosomal protein S2 [Oceanicola granulosus HTCC2516] Length = 298 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 142/236 (60%), Positives = 185/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNPKM YI+ RN HI+DL+QTVPML ALQ I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPKMAEYIYGARNGIHIMDLTQTVPMLDAALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + EAA++ AQY +N +WLGG +TNW+TVSQSI +LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAQKPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLRAID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER++ KL +L GIR+MGG+PD++FV+D N+E LAI EA++L Sbjct: 121 EAADVGFEGLTKKERLGMEREQAKLTASLGGIREMGGVPDMLFVIDVNKEDLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +P VDYVIPGNDD++R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPAGVDYVIPGNDDAARAIALYCDLVSRAALDGMSAQLGAAGVD 236 >gi|260575091|ref|ZP_05843092.1| ribosomal protein S2 [Rhodobacter sp. SW2] gi|259022713|gb|EEW26008.1| ribosomal protein S2 [Rhodobacter sp. SW2] Length = 252 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 139/236 (58%), Positives = 188/236 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV +GH+ WNPKM YI+ +RN HI+DL+QTVP+L +AL+V+ Sbjct: 1 MALPEFTMRQLLEAGVHYGHQTARWNPKMGEYIYGDRNGIHILDLTQTVPLLDQALKVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA+R AQ+ +N +WLGG +TNWKTVSQSI +L+ ++ Sbjct: 61 DTVAKGGRILFVGTKRQAQKPISEAAERCAQFYMNHRWLGGTLTNWKTVSQSINRLKQVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EL+ G TKKERLNIER++ KL+ +L GIR+MGG+PDL+F++D +E LAI EA++L Sbjct: 121 ELMAHGADGLTKKERLNIEREQTKLQASLGGIREMGGVPDLIFIIDVGKEDLAILEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++AVVDTN +P VDY+IPGNDD++R+IAL+CDL++ AA+DG+ Q G D Sbjct: 181 GIPVIAVVDTNCSPKGVDYIIPGNDDAARAIALYCDLISRAALDGMTAQMGAAGID 236 >gi|254421050|ref|ZP_05034774.1| ribosomal protein S2 [Brevundimonas sp. BAL3] gi|196187227|gb|EDX82203.1| ribosomal protein S2 [Brevundimonas sp. BAL3] Length = 302 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 137/240 (57%), Positives = 187/240 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++R LLE+G FGH+ WNPKM+RYIF R+N HIIDLSQT+P+ +AL + Sbjct: 1 MALPEFSMRTLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTMPLFHQALVAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A+GGR+LFV TK QAS+ V EAAKR AQY +N++WLGG +TNW+TVS SI +LR+LE Sbjct: 61 DVAAKGGRVLFVGTKRQASEPVAEAAKRCAQYYMNNRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L +G KKE LN++R++DKL+ +L GI+DMG +PD+MFV+DTN+E +AIQEAR+L Sbjct: 121 GILENGGEGRVKKELLNLQREKDKLELSLGGIKDMGSIPDIMFVIDTNKEAIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A++DTNS+PD + Y +PGNDD++R+I +CDL+A A +DG+A S G D +A Sbjct: 181 NIPIIAILDTNSDPDGITYPVPGNDDAARAIQTYCDLIADAVLDGLAAGASASGVDLGAA 240 >gi|56696849|ref|YP_167211.1| 30S ribosomal protein S2 [Ruegeria pomeroyi DSS-3] gi|61215365|sp|Q5LRZ4|RS2_SILPO RecName: Full=30S ribosomal protein S2 gi|56678586|gb|AAV95252.1| ribosomal protein S2 [Ruegeria pomeroyi DSS-3] Length = 257 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 140/236 (59%), Positives = 186/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL+ + Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHILDLTQTVPMLDQALKAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QAS + EAA++SAQY +N +WLGG +TNWKTVSQSIQ+LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLRMID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EKMEGGAEGLTKKERLGMERDQAKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VDY+IPGNDD++R+I+L+CDL A AA+DG+ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMTAQLGAAGVD 236 >gi|84516209|ref|ZP_01003569.1| 30S ribosomal protein S2 [Loktanella vestfoldensis SKA53] gi|84509905|gb|EAQ06362.1| 30S ribosomal protein S2 [Loktanella vestfoldensis SKA53] Length = 276 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 142/236 (60%), Positives = 185/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNPKM +YI+ RN HI+DL+QTVPML +ALQVI Sbjct: 16 MALPEFSMRQLLEAGVHFGHQTARWNPKMGQYIYGSRNGIHIMDLTQTVPMLDRALQVIR 75 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA VMEAA++SAQ+ +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 76 DTVAKGGRVLFVGTKRQAQTPVMEAAEKSAQFFMNHRWLGGTLTNWQTVSQSISRLKAID 135 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E LAI EA +L Sbjct: 136 EASANGFAGLTKKERLGMEREQGKLQASLGGIREMGGVPDLLFVIDVNKEALAIAEANKL 195 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +P +DYVIPGNDD++R+IAL+ DL A AA+DG+ Q G D Sbjct: 196 GIPVVAVVDTNCSPAGIDYVIPGNDDAARAIALYTDLAARAALDGMTAQLGAAGVD 251 >gi|159044097|ref|YP_001532891.1| 30S ribosomal protein S2 [Dinoroseobacter shibae DFL 12] gi|189044937|sp|A8LK91|RS2_DINSH RecName: Full=30S ribosomal protein S2 gi|157911857|gb|ABV93290.1| ribosomal protein S2 [Dinoroseobacter shibae DFL 12] Length = 259 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 142/236 (60%), Positives = 183/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F IRQLLE+GV FGH+ WNP+M YI+ +RN HI+DL+QTVPML +ALQ + Sbjct: 1 MALPDFNIRQLLEAGVHFGHQTQRWNPRMAPYIYGDRNGIHIMDLTQTVPMLDQALQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + EAA+R AQY +N +WLGG +TNWKTVS SI +L+ ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAQKPIAEAAERCAQYYMNHRWLGGTLTNWKTVSNSIGRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EAMEGGFEGLTKKERLGMERDQGKLQASLGGIREMGGVPDLIFVIDVKKEDLAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VDYVIPGNDD++R+IAL+CDLVA AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYVIPGNDDAARAIALYCDLVARAALDGMSAQLGAAGVD 236 >gi|118590011|ref|ZP_01547415.1| 30S ribosomal protein S2 [Stappia aggregata IAM 12614] gi|118437508|gb|EAV44145.1| 30S ribosomal protein S2 [Stappia aggregata IAM 12614] Length = 259 Score = 311 bits (798), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 141/239 (58%), Positives = 188/239 (78%), Gaps = 1/239 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNP+M +YIF RN+ HI+DLSQTVP+L +AL+ +SDTV+ GG Sbjct: 1 MRQLLEAGVHFGHQKHRWNPRMGQYIFGVRNDVHIMDLSQTVPLLHQALKAVSDTVSGGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 R+L V TK QA + V AA+ SAQY VN++WLGGM+TNWKT+SQSIQ+LR LEE L+ + Sbjct: 61 RVLIVGTKRQAQEAVASAARNSAQYYVNARWLGGMLTNWKTISQSIQRLRKLEETLSSDA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKERL ++R+R+KL+R L GI+DMGG+PDL+FV+DTNRE +AIQEARRL IP+ A Sbjct: 121 ANALTKKERLFMDREREKLERNLGGIKDMGGIPDLIFVIDTNREAIAIQEARRLGIPVAA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 ++D+NSNP+ + Y +PGNDD+ R+++L+CDL+A AAIDGI+R G D + E V Sbjct: 181 ILDSNSNPEGITYPVPGNDDAGRALSLYCDLIARAAIDGISRAQGASGMDIGESEEAPV 239 >gi|114569930|ref|YP_756610.1| 30S ribosomal protein S2 [Maricaulis maris MCS10] gi|122316103|sp|Q0APW5|RS2_MARMM RecName: Full=30S ribosomal protein S2 gi|114340392|gb|ABI65672.1| SSU ribosomal protein S2P [Maricaulis maris MCS10] Length = 288 Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 141/242 (58%), Positives = 186/242 (76%), Gaps = 2/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G FGH+ WNPKM+ +IF ER+N HIIDLSQTVP+L +AL + Sbjct: 1 MALPDFSMRQLLEAGCHFGHQTHRWNPKMKDFIFGERSNIHIIDLSQTVPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +T A+GGR+LFV TK QA D + +AA R AQY +N +WLGG +TNW+T+S SI +LR+LE Sbjct: 61 ETAAKGGRVLFVGTKRQAQDPLAQAAGRCAQYYMNQRWLGGTLTNWRTISNSIARLRELE 120 Query: 121 ELLNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + E G TKKE+L + R+R+KL R+L GI+DMGG PDLMFV+DTN+E +AIQEA+ Sbjct: 121 GMFENEGGMAGLTKKEQLMLTREREKLDRSLGGIKDMGGTPDLMFVIDTNKEGIAIQEAK 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IP++AVVDTN +PDLVD+ IPGNDD+SR+I+L+CDL+A A +DG+ MG D Sbjct: 181 KLGIPVIAVVDTNCDPDLVDFPIPGNDDASRAISLYCDLIADAVLDGMGDSQLAMGMDLG 240 Query: 239 SA 240 A Sbjct: 241 EA 242 >gi|295689597|ref|YP_003593290.1| 30S ribosomal protein S2 [Caulobacter segnis ATCC 21756] gi|295431500|gb|ADG10672.1| ribosomal protein S2 [Caulobacter segnis ATCC 21756] Length = 274 Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 139/236 (58%), Positives = 184/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+RYIF R+N HIIDLSQT+P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QASD V AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L E QG +KKE L + R+RDKL+ +L GI+DMGG+PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GVLAGEAQGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA++DTN +PD + Y IPGNDD++R++ L+CDL+A A +DG+A + G D Sbjct: 181 NIPVVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQAASGVD 236 >gi|255263690|ref|ZP_05343032.1| ribosomal protein S2 [Thalassiobium sp. R2A62] gi|255106025|gb|EET48699.1| ribosomal protein S2 [Thalassiobium sp. R2A62] Length = 264 Score = 311 bits (796), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 140/236 (59%), Positives = 186/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNPKM++YI+ RN HI+DL+QTVPML AL V+ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPKMQQYIYGSRNGIHIMDLTQTVPMLDAALNVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+GGR+LFV TK QA + +AA++SAQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 ETVAKGGRVLFVGTKRQAQRPIADAAEKSAQYYMNHRWLGGTLTNWQTVSQSINRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EAMETGFEGLTKKERLGMERDQGKLQASLGGIREMGGVPDLLFVIDVRKEDLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VDYVIPGNDD++R+IAL+ DLVA AA+DG+ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYVIPGNDDAARAIALYTDLVARAALDGMTAQMGAAGID 236 >gi|163736431|ref|ZP_02143850.1| ribosomal protein S2 [Phaeobacter gallaeciensis BS107] gi|163741034|ref|ZP_02148426.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis 2.10] gi|161385387|gb|EDQ09764.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis 2.10] gi|161390301|gb|EDQ14651.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis BS107] Length = 257 Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 138/236 (58%), Positives = 186/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL + Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMSPFIYGSRNGIHILDLTQTVPMLDAALNAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + +AA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAQPIADAAEKSAQYFMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIRDMGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EKMASGAEGLTKKERLGMERDQLKLEASLGGIRDMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA+VDTN +PD VDY+IPGNDD++R+IAL+CDLVA AA+DG++ Q G D Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAIALYCDLVARAALDGMSAQLGAAGVD 236 >gi|288958467|ref|YP_003448808.1| small subunit ribosomal protein S2 [Azospirillum sp. B510] gi|288910775|dbj|BAI72264.1| small subunit ribosomal protein S2 [Azospirillum sp. B510] Length = 259 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 135/240 (56%), Positives = 182/240 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P FT+RQLLE+GV FGH WNPKM +YIF RN HIIDL QTVPML +ALQ + Sbjct: 1 MTMPTFTMRQLLEAGVHFGHHTRRWNPKMNQYIFGVRNGVHIIDLEQTVPMLHRALQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK QA + + EAA + QY VN +WLGGM+TNWKT+SQSI++LR++E Sbjct: 61 DVVAGGGRVLFVGTKRQAQERIAEAAAKCGQYYVNHRWLGGMLTNWKTISQSIKRLREME 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + G TK+E L + R+RDKL+RAL GI++MGGLPD++F++DTN+E +A++EA +L Sbjct: 121 ERLGGDTSGLTKREVLELTRERDKLERALGGIKEMGGLPDVIFIIDTNKESIAVKEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AV+D+NS+PD V + IPGNDD+ R+I ++CDL A +DG+ + S G D +A Sbjct: 181 GIPVIAVLDSNSDPDGVAFPIPGNDDALRAIEMYCDLTVGAVLDGLQAEMSAAGIDVGAA 240 >gi|297717884|gb|ADI50085.1| SSU ribosomal protein S2p [Candidatus Odyssella thessalonicensis L13] Length = 254 Score = 308 bits (789), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 139/242 (57%), Positives = 187/242 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+G+ +GH WNPKM ++F RNN HIIDL QTV +L +AL+ I Sbjct: 1 MALPTFTMRQLLEAGIHYGHHTRRWNPKMAPFLFGVRNNIHIIDLEQTVNLLHRALEAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GGR+LFV TK QAS V EAA + QY +N +WLGG +TNWKTV+QSI+++++ E Sbjct: 61 NTVAAGGRVLFVGTKPQASAKVKEAALKCGQYYINHRWLGGTLTNWKTVNQSIKRMKEQE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E LN+ +QG TKKE+L+++R+ +KL+ AL GIRDMGGLPDL+FV+DTN+E +AIQEARRL Sbjct: 121 ERLNQHSQGLTKKEQLDLQREYNKLELALGGIRDMGGLPDLLFVIDTNKEAIAIQEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+V V+D+NS+P V Y IPGNDD+ R+I ++C+LVA A +DG+ + + G D +A Sbjct: 181 GIPVVGVLDSNSDPAGVSYPIPGNDDAQRAIQMYCELVAGAVLDGLQAEMASAGIDIGAA 240 Query: 241 GE 242 E Sbjct: 241 AE 242 >gi|114765356|ref|ZP_01444473.1| 30S ribosomal protein S2 [Pelagibaca bermudensis HTCC2601] gi|114542336|gb|EAU45365.1| 30S ribosomal protein S2 [Roseovarius sp. HTCC2601] Length = 255 Score = 308 bits (789), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 135/236 (57%), Positives = 187/236 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL VI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHILDLTQTVPMLDAALNVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+GGR+LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 ETVAKGGRVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER++ KL+ +L GIR+MGGLP+L+FV+D +E+LAI EA++L Sbjct: 121 EQMEAGAEGLTKKERLGMEREQAKLQASLGGIREMGGLPELLFVIDVKKEQLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA+VDTN +P+ VDY+IPGNDD++R+IAL+CDLV+ AA+DG+ Q G D Sbjct: 181 GIPVVAIVDTNCSPEGVDYIIPGNDDAARAIALYCDLVSRAALDGMTGQMEAAGVD 236 >gi|167646767|ref|YP_001684430.1| 30S ribosomal protein S2 [Caulobacter sp. K31] gi|189044929|sp|B0SZ21|RS2_CAUSK RecName: Full=30S ribosomal protein S2 gi|167349197|gb|ABZ71932.1| ribosomal protein S2 [Caulobacter sp. K31] Length = 313 Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 136/236 (57%), Positives = 184/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+RYIF R+N HIIDLSQ++P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQSIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QASD V AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ E+ G +KKE L + R+RDKL+ +L GI+DMGG+PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GIMGGESAGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA++DTN +PD + Y IPGNDD++R++ L+CDL+A A +DG+A + G D Sbjct: 181 NIPVVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQANSGVD 236 >gi|302383609|ref|YP_003819432.1| ribosomal protein S2 [Brevundimonas subvibrioides ATCC 15264] gi|302194237|gb|ADL01809.1| ribosomal protein S2 [Brevundimonas subvibrioides ATCC 15264] Length = 298 Score = 307 bits (787), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 134/236 (56%), Positives = 184/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++R LLE+G FGH+ WNPKMERYIF R+N HIIDLSQT+P+ +AL + Sbjct: 1 MALPDFSMRTLLEAGAHFGHQTHRWNPKMERYIFGSRSNIHIIDLSQTMPLFHQALVAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A+GGR+LFV TK QA++ V EAAKR AQY +N++WLGG +TNWKTVS SI +LR+LE Sbjct: 61 EVAAKGGRVLFVGTKRQAAEPVAEAAKRCAQYYMNNRWLGGTLTNWKTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L + +G KKE +N+ R+++KL+ +L GIRDMG +PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GILERGGEGRVKKELVNLSREKEKLELSLGGIRDMGSIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+A++DTNS+PD + Y IPGNDD++R+I +CDL+A A +DG+A ++ G D Sbjct: 181 NIPIIAILDTNSDPDGITYPIPGNDDAARAIQTYCDLIADAVLDGLAAGAAHSGVD 236 >gi|149914865|ref|ZP_01903394.1| ribosomal protein S2 [Roseobacter sp. AzwK-3b] gi|149811053|gb|EDM70890.1| ribosomal protein S2 [Roseobacter sp. AzwK-3b] Length = 267 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 138/236 (58%), Positives = 181/236 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HIIDL+QTVPML AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIIDLTQTVPMLDAALNAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V++GGRILFV TK QA+ V +AA R AQY +N +WLGG +TNW+TVSQSI++L +++ Sbjct: 61 DVVSKGGRILFVGTKRQAAQPVADAADRCAQYYMNHRWLGGTLTNWQTVSQSIKRLNEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L G TKKERL IER + KL+ +L GIR+MGGLPD++FV+D +E LA+ EA +L Sbjct: 121 EILGAGAGGLTKKERLGIERDQQKLQASLGGIREMGGLPDMLFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA+VDTN +PD VDY+IPGNDD++R+I+L+CDLV+ A+DG A Q G D Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVSRTALDGTAVQLGAAGVD 236 >gi|209964520|ref|YP_002297435.1| 30S ribosomal protein S2 [Rhodospirillum centenum SW] gi|238058200|sp|B6ISV1|RS2_RHOCS RecName: Full=30S ribosomal protein S2 gi|209957986|gb|ACI98622.1| ribosomal protein S2 [Rhodospirillum centenum SW] Length = 261 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 141/244 (57%), Positives = 185/244 (75%), Gaps = 1/244 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNPKM Y+F RN HIIDL Q+VPM+ +A+Q + Sbjct: 1 MAIPTFTMRQLLEAGVHFGHHTRRWNPKMAPYLFGVRNGVHIIDLEQSVPMMYRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL- 119 D VA GGR+LFV TK A + V E+AKR QY VN +WLGGM+TNWKT+SQSI++L+++ Sbjct: 61 DVVAGGGRVLFVGTKRAAQEKVAESAKRCGQYYVNHRWLGGMLTNWKTISQSIRRLKEMD 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L E G TKKE LN+ R+R+KL+RAL GIRDMGGLPDL+F++DTN+E LAIQEA + Sbjct: 121 EQLAVGEQSGRTKKELLNMTREREKLERALGGIRDMGGLPDLLFIIDTNKESLAIQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVD+NS+PD V + +PGNDD+ R+I +C+L+A A +DG+ + S G D + Sbjct: 181 LGIPVVAVVDSNSDPDGVTFPVPGNDDALRAIDTYCELIAGAVLDGLQAEMSAAGIDLGA 240 Query: 240 AGET 243 A E Sbjct: 241 AEEA 244 >gi|114327943|ref|YP_745100.1| 30S ribosomal protein S2 [Granulibacter bethesdensis CGDNIH1] gi|122327094|sp|Q0BSM5|RS2_GRABC RecName: Full=30S ribosomal protein S2 gi|114316117|gb|ABI62177.1| SSU ribosomal protein S2P [Granulibacter bethesdensis CGDNIH1] Length = 258 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 137/242 (56%), Positives = 187/242 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH WNP+M +IF RN HI+DL QTVP+L ++L+ I Sbjct: 1 MAMPEFTLRQLLEAGVHFGHHTRRWNPRMAPFIFGVRNQVHILDLQQTVPLLDRSLRAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK A++ V E+A+R QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DVVAGGGRVLFVGTKRAAAEYVAESAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L + G TKKE L+I R R+KL+RAL GI+DMGGLPD++F++DTN+EKLA++EA +L Sbjct: 121 EMLAGDTTGLTKKEVLDITRDREKLERALGGIKDMGGLPDILFIIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+NS+P V Y IPGNDD+ R+I ++CDLVASA +DGI+ + G D +A Sbjct: 181 GIPVVAVLDSNSDPSGVTYPIPGNDDAIRAITMYCDLVASAVLDGISAEMIASGRDLGAA 240 Query: 241 GE 242 E Sbjct: 241 EE 242 >gi|114768793|ref|ZP_01446419.1| 30S ribosomal protein S2 [alpha proteobacterium HTCC2255] gi|114549710|gb|EAU52591.1| 30S ribosomal protein S2 [alpha proteobacterium HTCC2255] Length = 344 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 133/236 (56%), Positives = 184/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M++YI+ RN HI+DL+QTVP+L +AL V+ Sbjct: 1 MALPEFSLRQLLEAGVHFGHQTHRWNPRMDQYIYGSRNGIHIMDLTQTVPLLDQALNVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TV++GGRILFV TK QAS V EAA+RSAQY +N +WLGG +TNW+TVS+SIQ+L+ + Sbjct: 61 ETVSKGGRILFVGTKRQASKAVAEAAERSAQYYMNHRWLGGTLTNWQTVSKSIQRLKAIS 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKERL +ER+ KL +L+GI +MGG PDL+FV+DTN+E LA+ EA +L Sbjct: 121 AQMETGFDGLTKKERLGMEREHAKLHASLNGIAEMGGTPDLLFVIDTNKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ ++DTNS P+ +DY IPGNDD++R+I L+CDL+A +A+DG+A Q G D Sbjct: 181 GIPVIGILDTNSAPEGIDYPIPGNDDAARAIGLYCDLIARSALDGMAAQMGSAGVD 236 >gi|126731215|ref|ZP_01747022.1| 30S ribosomal protein S2 [Sagittula stellata E-37] gi|126708126|gb|EBA07185.1| 30S ribosomal protein S2 [Sagittula stellata E-37] Length = 255 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 134/236 (56%), Positives = 184/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVP+L +ALQ I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIMDLTQTVPLLDQALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA+ GR+LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +LR ++ Sbjct: 61 DCVAKNGRVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLRSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERLN+ER + KL+ +L GIR+MGG+PD++FV+D +E LA+ EA +L Sbjct: 121 EQMENGAEGLTKKERLNMERDQQKLQASLGGIREMGGVPDMLFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA+VDTN +PD +DY+IPGNDD++R+IAL+CDLV+ AA+DG+ Q G D Sbjct: 181 GIPVVAIVDTNCSPDGIDYIIPGNDDAARAIALYCDLVSRAALDGMTGQMEAAGVD 236 >gi|89054797|ref|YP_510248.1| 30S ribosomal protein S2 [Jannaschia sp. CCS1] gi|123286546|sp|Q28PY9|RS2_JANSC RecName: Full=30S ribosomal protein S2 gi|88864346|gb|ABD55223.1| SSU ribosomal protein S2P [Jannaschia sp. CCS1] Length = 276 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 141/246 (57%), Positives = 192/246 (78%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ +RN HI+DL+QT PML++ALQV+ Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGEFIYGDRNGIHILDLTQTHPMLEQALQVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+GGRILFV TK QA V +AA+R AQY +N +WLGG +TNWKTVS SI +L++++ Sbjct: 61 ETVAKGGRILFVGTKRQAQKPVADAAERCAQYYMNHRWLGGTLTNWKTVSNSISRLKEID 120 Query: 121 E-LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + +G TKKERL +ER + KL+ +L GIR+MGGLPDL+FV+D N+E LAI EA++ Sbjct: 121 EKTADGSLEGLTKKERLGMERDQIKLQASLGGIREMGGLPDLIFVIDVNKEDLAIAEAKK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVDTN +PD VDY+IPGNDD++R+IAL+CDL++ AA+DG++ Q G D + Sbjct: 181 LGIPVVAVVDTNCSPDGVDYIIPGNDDAARAIALYCDLISRAALDGMSTQLETAGVDLGA 240 Query: 240 AGETVV 245 E V Sbjct: 241 LEEGSV 246 >gi|258543014|ref|YP_003188447.1| 30S ribosomal protein S2 [Acetobacter pasteurianus IFO 3283-01] gi|256634092|dbj|BAI00068.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-01] gi|256637152|dbj|BAI03121.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-03] gi|256640204|dbj|BAI06166.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-07] gi|256643261|dbj|BAI09216.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-22] gi|256646316|dbj|BAI12264.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-26] gi|256649369|dbj|BAI15310.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-32] gi|256652355|dbj|BAI18289.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655413|dbj|BAI21340.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-12] Length = 268 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 140/245 (57%), Positives = 185/245 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M Y+F RN HIIDL QTV +L +ALQ I Sbjct: 1 MAMPDFTLRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVGLLDRALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GGR+LFV TK A D + EAA+R QY VN +WLGGM+TNWKT+ SI++LR +E Sbjct: 61 NTVAGGGRVLFVGTKRAAQDPIAEAARRCGQYYVNHRWLGGMLTNWKTIQGSIKRLRGIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ G TKKE L++ R+RDKL+R+L GI++MGGLPD++FV+DTN+EKLAI+EA +L Sbjct: 121 ETLDGATAGLTKKEILDMTRQRDKLERSLGGIKEMGGLPDILFVIDTNKEKLAIEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+NS+P V + IPGNDD+ R+I L+CDLV+SA +DGI+ + G D +A Sbjct: 181 GIPVVAILDSNSDPRGVTFPIPGNDDAIRAIGLYCDLVSSAVLDGISAELGASGEDIGAA 240 Query: 241 GETVV 245 E V Sbjct: 241 EELPV 245 >gi|329115621|ref|ZP_08244343.1| 30S ribosomal protein S2 [Acetobacter pomorum DM001] gi|326695049|gb|EGE46768.1| 30S ribosomal protein S2 [Acetobacter pomorum DM001] Length = 265 Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 140/245 (57%), Positives = 185/245 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M Y+F RN HIIDL QTV +L +ALQ I Sbjct: 1 MAMPDFTLRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVGLLDRALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GGR+LFV TK A D + EAA+R QY VN +WLGGM+TNWKT+ SI++LR +E Sbjct: 61 NTVAGGGRVLFVGTKRAAQDPIAEAARRCGQYYVNHRWLGGMLTNWKTIQGSIKRLRGIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ G TKKE L++ R+RDKL+R+L GI++MGGLPD++FV+DTN+EKLAI+EA +L Sbjct: 121 ETLDGATAGLTKKEILDMTRQRDKLERSLGGIKEMGGLPDILFVIDTNKEKLAIEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+NS+P V + IPGNDD+ R+I L+CDLV+SA +DGI+ + G D +A Sbjct: 181 GIPVVAILDSNSDPRGVTFPIPGNDDAIRAIGLYCDLVSSAVLDGISAELGASGQDIGAA 240 Query: 241 GETVV 245 E V Sbjct: 241 EELPV 245 >gi|84501132|ref|ZP_00999367.1| 30S ribosomal protein S2 [Oceanicola batsensis HTCC2597] gi|84391199|gb|EAQ03617.1| 30S ribosomal protein S2 [Oceanicola batsensis HTCC2597] Length = 255 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 135/236 (57%), Positives = 185/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL VI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIVDLTQTVPMLDQALNVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+ GR+LFV TK QAS + EAA++ AQY +N +WLGG +TNWKTVSQSI +L +++ Sbjct: 61 ETVAKNGRVLFVGTKRQASAPIAEAAEKCAQYYMNHRWLGGTLTNWKTVSQSINRLNEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ +G TKKERL +ER ++KL +L GIR+MGG+PDL+FV+D +E+LA+ EA +L Sbjct: 121 EKLSAGAEGLTKKERLGMERDQEKLTASLGGIREMGGVPDLLFVIDVKKEQLAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD +DY+IPGNDD++R+I+L+CDL + AA+DG+ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGIDYIIPGNDDAARAISLYCDLASRAALDGMTAQLGAAGVD 236 >gi|99081051|ref|YP_613205.1| 30S ribosomal protein S2 [Ruegeria sp. TM1040] gi|123252399|sp|Q1GHC3|RS2_SILST RecName: Full=30S ribosomal protein S2 gi|99037331|gb|ABF63943.1| SSU ribosomal protein S2P [Ruegeria sp. TM1040] Length = 256 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 141/236 (59%), Positives = 188/236 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHIMDLTQTVPMLDQALTAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAAPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER ++KL+ +L GIRDMGG+PDL+FV+D +E LAI EA +L Sbjct: 121 ERMAAGAEGLTKKERLGMERDQEKLQASLGGIRDMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VDY+IPGNDD++R+I+L+CDLVA AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLVARAALDGMSAQLGAAGVD 236 >gi|163746350|ref|ZP_02153708.1| 30S ribosomal protein S2 [Oceanibulbus indolifex HEL-45] gi|161380235|gb|EDQ04646.1| 30S ribosomal protein S2 [Oceanibulbus indolifex HEL-45] Length = 292 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 136/236 (57%), Positives = 184/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M YI+ RN HI+DL+QTVPML AL++I Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGPYIYGARNGIHIMDLTQTVPMLDDALKIIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GG +LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +L++++ Sbjct: 61 DTVAKGGSVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKNID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LAI EA +L Sbjct: 121 EQSERGFEGLTKKERLGMERDQYKLEASLGGIREMGGRPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN +PD VDY+IPGNDD++R+I+L+CDL A AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMSAQLGAAGVD 236 >gi|259419260|ref|ZP_05743177.1| ribosomal protein S2 [Silicibacter sp. TrichCH4B] gi|259345482|gb|EEW57336.1| ribosomal protein S2 [Silicibacter sp. TrichCH4B] Length = 256 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 140/236 (59%), Positives = 188/236 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALTAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAAPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER ++KL+ +L GIRDMGG+PDL+FV+D +E LAI EA +L Sbjct: 121 ERMAAGAEGLTKKERLGMERDQEKLQASLGGIRDMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA+VDTN +PD VDY+IPGNDD++R+I+L+CDLVA AA+DG++ Q G D Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVARAALDGMSAQLGAAGVD 236 >gi|294677358|ref|YP_003577973.1| 30S ribosomal protein S2 [Rhodobacter capsulatus SB 1003] gi|294476178|gb|ADE85566.1| 30S ribosomal protein S2 [Rhodobacter capsulatus SB 1003] Length = 251 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 141/245 (57%), Positives = 191/245 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV +GH+ WNP+M +I+ ERN HIIDL+QTVPML AL V+ Sbjct: 1 MALPDFSLRQLLEAGVHYGHQTQRWNPRMAEFIYGERNGIHIIDLTQTVPMLDAALNVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ V +AA++ AQY +N +WLGG +TNWKTVSQSI +L+ ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAKAVADAAEKCAQYYMNHRWLGGTLTNWKTVSQSIARLKQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E++ +G TKKERL +ER++ KL+ +L GIR+MGGLPDL+FV+D ++E LAI EA++L Sbjct: 121 EIMASGAEGLTKKERLGMEREQAKLQASLGGIREMGGLPDLLFVIDVSKEDLAILEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +P VDY+IPGNDD++R+IAL+CDLV+ AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPKGVDYIIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGVDLGAL 240 Query: 241 GETVV 245 E V Sbjct: 241 EEAPV 245 >gi|330994744|ref|ZP_08318666.1| 30S ribosomal protein S2 [Gluconacetobacter sp. SXCC-1] gi|329758005|gb|EGG74527.1| 30S ribosomal protein S2 [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 145/261 (55%), Positives = 196/261 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH WNP+M Y+F RN HIIDL QTVPML +AL+ I Sbjct: 1 MAMPEFTMRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVPMLDRALKAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D + EAAKR QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DTVAGGGRVLFVGTKRAAADQIAEAAKRCGQYYVNHRWLGGMLTNWKTITGSIKRLRSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L QG TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L Sbjct: 121 EMLENGTQGLTKKEVLDITRDREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+NS+P V + IPGNDD+ R+IAL+C+LV+SA +DGI+ + G D ++ Sbjct: 181 GIPVVAVLDSNSDPRGVTFPIPGNDDAIRAIALYCELVSSAVLDGISAELGASGEDFGAS 240 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 E V + E + S+E Sbjct: 241 EELPVDPAVETAVTEAAASAE 261 >gi|16126166|ref|NP_420730.1| 30S ribosomal protein S2 [Caulobacter crescentus CB15] gi|221234937|ref|YP_002517373.1| 30S ribosomal protein S2 [Caulobacter crescentus NA1000] gi|25009221|sp|Q9A703|RS2_CAUCR RecName: Full=30S ribosomal protein S2 gi|254764465|sp|B8GWS3|RS2_CAUCN RecName: Full=30S ribosomal protein S2 gi|13423378|gb|AAK23898.1| ribosomal protein S2 [Caulobacter crescentus CB15] gi|220964109|gb|ACL95465.1| SSU ribosomal protein S2P [Caulobacter crescentus NA1000] Length = 268 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 134/224 (59%), Positives = 178/224 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+RYIF R+N HIIDLSQ++P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQSIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QASD V AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L E QG +KKE L + R+RDKL+ +L GI+DMGG+PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GVLAGEGQGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP+VA++DTN +PD + Y IPGNDD++R++ L+CDL+A A +D Sbjct: 181 NIPVVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLD 224 >gi|83311597|ref|YP_421861.1| 30S ribosomal protein S2 [Magnetospirillum magneticum AMB-1] gi|123767989|sp|Q2W4C3|RS2_MAGMM RecName: Full=30S ribosomal protein S2 gi|82946438|dbj|BAE51302.1| Ribosomal protein S2 [Magnetospirillum magneticum AMB-1] Length = 266 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 137/246 (55%), Positives = 183/246 (74%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQL+E+GV FGH WNPKM Y+F RN HIIDL Q+VPML +A+Q + Sbjct: 1 MALPTFTMRQLVEAGVHFGHNTRRWNPKMASYLFGIRNGIHIIDLQQSVPMLHRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL- 119 D A GGR+LFV TK QASD V E+AKR QY VN +WLGGM+TNWKT+S SI++LR+L Sbjct: 61 DVTAGGGRVLFVGTKHQASDVVAESAKRCGQYFVNHRWLGGMLTNWKTISNSIRRLRELD 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L + G TKKE+L + R+++KL RAL GI+DMGGLPD++F++DTN+E LA+QEA + Sbjct: 121 EQLASGALAGLTKKEQLVLSREKEKLDRALGGIKDMGGLPDILFIIDTNKEALAVQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++D+N +P + Y IPGNDD+ R+I +CDL++ A +DGI + + G D + Sbjct: 181 LGIPVVAIIDSNCDPAGITYPIPGNDDAIRAIQTYCDLMSGAVLDGIQAEITRGGGDVGA 240 Query: 240 AGETVV 245 A E V Sbjct: 241 AAEAPV 246 >gi|83942429|ref|ZP_00954890.1| 30S ribosomal protein S2 [Sulfitobacter sp. EE-36] gi|83846522|gb|EAP84398.1| 30S ribosomal protein S2 [Sulfitobacter sp. EE-36] Length = 289 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 134/236 (56%), Positives = 183/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQVI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GG ILFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVS+SIQ+L+ ++ Sbjct: 61 DTVAKGGSILFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSKSIQRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LA+ EA +L Sbjct: 121 EQSERGFSGLTKKERLGMERDQAKLEASLGGIREMGGRPDLIFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++AVVDTN +PD +DY+IPGNDD++R+I ++CDL A AA+DG++ Q G D Sbjct: 181 GIPVIAVVDTNCSPDGIDYIIPGNDDAARAIHMYCDLAARAALDGMSAQLGAAGVD 236 >gi|58038564|ref|YP_190528.1| 30S ribosomal protein S2 [Gluconobacter oxydans 621H] gi|81672763|sp|Q5FUV7|RS2_GLUOX RecName: Full=30S ribosomal protein S2 gi|58000978|gb|AAW59872.1| SSU ribosomal protein S2P [Gluconobacter oxydans 621H] Length = 265 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 142/242 (58%), Positives = 187/242 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP M Y+F RN HIIDL QTVPML +AL+V+ Sbjct: 1 MAMPDFTMRQLLEAGVHFGHHTRRWNPAMAPYLFGVRNQVHIIDLQQTVPMLDRALKVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D V EAA+R QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DTVANGGRVLFVGTKRAAADHVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L+ + G TKKE L+I R R+KL+R+L GI++MGGLPDL+FV+DTN+EKLAI+EA +L Sbjct: 121 EMLSGDTAGLTKKEVLDITRDREKLERSLGGIKEMGGLPDLLFVIDTNKEKLAIEEATKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++ V+D+NSNP V Y IPGNDD+ R+I L+CDLV+ A +DGI+ + + G D +A Sbjct: 181 GIPVIGVLDSNSNPAGVTYPIPGNDDAIRAITLYCDLVSGAVLDGISAELAASGQDIGAA 240 Query: 241 GE 242 E Sbjct: 241 EE 242 >gi|260426326|ref|ZP_05780305.1| ribosomal protein S2 [Citreicella sp. SE45] gi|260420818|gb|EEX14069.1| ribosomal protein S2 [Citreicella sp. SE45] Length = 255 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 136/236 (57%), Positives = 187/236 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL+ I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHILDLTQTVPMLDAALKAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAAPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSIARLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E ++ +G TKKERL +ER + KL+ +L GIR+MGGLPD++FV+D +E+LAI EA++L Sbjct: 121 EQMDTGAEGLTKKERLGMERDQQKLQASLGGIREMGGLPDMLFVIDVKKEQLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA+VDTN +PD VDY+IPGNDD++R+I+L+CDLV+ AA+DG+ Q G D Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVSRAALDGMTGQMEAAGVD 236 >gi|148260691|ref|YP_001234818.1| 30S ribosomal protein S2 [Acidiphilium cryptum JF-5] gi|166225232|sp|A5FZ67|RS2_ACICJ RecName: Full=30S ribosomal protein S2 gi|146402372|gb|ABQ30899.1| SSU ribosomal protein S2P [Acidiphilium cryptum JF-5] Length = 256 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/236 (58%), Positives = 184/236 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P ++RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML++AL+ I Sbjct: 1 MAMPDVSLRQLLEAGVHFGHNTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLERALREIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK A++ V AAKR QY VN +WLGGM+TNWKT++ SI+KLR +E Sbjct: 61 NVTAGGGRVLFVGTKRAAAEHVAYAAKRCGQYYVNHRWLGGMLTNWKTITNSIRKLRQME 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + QG TKKE LN+ R+RDKL RAL GI++MGGLPD++F++DTN+EKLA++EA +L Sbjct: 121 ETLAGDGQGLTKKEMLNLMRERDKLDRALGGIKEMGGLPDILFIIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAV+D+NSNP+ V Y IPGNDD+ R+I L+CDLVA+A +DGI+ + + GAD Sbjct: 181 GIPVVAVLDSNSNPEGVTYPIPGNDDAIRAITLYCDLVANAVLDGISAEMAASGAD 236 >gi|326403885|ref|YP_004283967.1| 30S ribosomal protein S2 [Acidiphilium multivorum AIU301] gi|325050747|dbj|BAJ81085.1| 30S ribosomal protein S2 [Acidiphilium multivorum AIU301] Length = 256 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/236 (58%), Positives = 185/236 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P ++RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML++AL+ I Sbjct: 1 MAMPDVSLRQLLEAGVHFGHNTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLERALREIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK A++ V +AAKR QY VN +WLGGM+TNWKT++ SI+KLR +E Sbjct: 61 NVTAGGGRVLFVGTKRAAAEHVADAAKRCGQYYVNHRWLGGMLTNWKTITNSIRKLRQME 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + QG TKKE LN+ R+RDKL RAL GI++MGGLPD++F++DTN+EKLA++EA +L Sbjct: 121 ETLAGDGQGLTKKEMLNLMRERDKLDRALGGIKEMGGLPDILFIIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAV+D+NSNP+ V Y IPGNDD+ R+I L+CDLVA+A +DGI+ + + GAD Sbjct: 181 GIPVVAVLDSNSNPEGVTYPIPGNDDAIRAITLYCDLVANAVLDGISAEMAASGAD 236 >gi|110679879|ref|YP_682886.1| 30S ribosomal protein S2 [Roseobacter denitrificans OCh 114] gi|123361841|sp|Q165Z3|RS2_ROSDO RecName: Full=30S ribosomal protein S2 gi|109455995|gb|ABG32200.1| ribosomal protein S2 [Roseobacter denitrificans OCh 114] Length = 260 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 135/236 (57%), Positives = 181/236 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQ I Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GG ILFV TK QA + +AA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 DTVAKGGSILFVGTKRQAQQPIADAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LA+ EA +L Sbjct: 121 EQSERGFEGLTKKERLGMERDQGKLQASLGGIREMGGRPDLIFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTN PD +DY+IPGNDD+SR+I+L+CDL A AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCAPDGIDYIIPGNDDASRAISLYCDLAARAALDGMSAQLGAAGVD 236 >gi|46202352|ref|ZP_00053343.2| COG0052: Ribosomal protein S2 [Magnetospirillum magnetotacticum MS-1] Length = 266 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 135/246 (54%), Positives = 183/246 (74%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQL+E+GV FGH WNPKM Y+F RN HIIDL Q+VPML +A+Q + Sbjct: 1 MALPTFTMRQLVEAGVHFGHNTRRWNPKMASYLFGIRNGIHIIDLQQSVPMLHRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL- 119 D A GGR+LFV TK QAS+ V E+AKR QY VN +WLGGM+TNWKT+S SI++LR+L Sbjct: 61 DVTAGGGRVLFVGTKHQASEVVAESAKRCGQYFVNHRWLGGMLTNWKTISNSIRRLRELD 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L + G TKKE+L + R+++KL RAL GI+DMGGLPD++F++DTN+E LA+QEA + Sbjct: 121 EQLASGALAGLTKKEQLVLSREKEKLDRALGGIKDMGGLPDILFIIDTNKEALAVQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++D+N +P + Y IPGNDD+ R+I +CDL++ A +DGI + + G D + Sbjct: 181 LGIPVVAIIDSNCDPAGITYPIPGNDDAIRAIQTYCDLMSGAVLDGIQAEITRGGGDVGA 240 Query: 240 AGETVV 245 + E V Sbjct: 241 SAEAPV 246 >gi|294084088|ref|YP_003550846.1| 30S ribosomal protein S2 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663661|gb|ADE38762.1| Ribosomal protein S2 [Candidatus Puniceispirillum marinum IMCC1322] Length = 287 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 137/246 (55%), Positives = 184/246 (74%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQ+LE+GV FGH W+P+ME +IF ERN THI+DL QTVPML AL+ IS Sbjct: 1 MALPTFTMRQMLEAGVHFGHSTRRWDPRMEPFIFGERNKTHILDLQQTVPMLHHALKAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A+GGR+LFV TK AS+ + E A+ QY VN +WLGGM+TNW TVSQSI++LRDLE Sbjct: 61 DVAAKGGRVLFVGTKRAASEKIAETARDCGQYYVNHRWLGGMLTNWATVSQSIRRLRDLE 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + E TKKE L + R+++KL+R L GI++MGGLPD++F++DTN+E +A+QEA R Sbjct: 121 ARMESGEINQLTKKEILQLTREQEKLERTLGGIKEMGGLPDILFILDTNKEAIAVQEANR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVD+N++P+ VDY+IPGNDD+ R+I +C+LV A +DG+ + G D + Sbjct: 181 LNIPVVAVVDSNASPEGVDYLIPGNDDAMRAITFYCELVQGAVLDGLQTELMKSGGDVGA 240 Query: 240 AGETVV 245 A E V Sbjct: 241 AVEAPV 246 >gi|126736489|ref|ZP_01752230.1| ribosomal protein S2 [Roseobacter sp. CCS2] gi|126714027|gb|EBA10897.1| ribosomal protein S2 [Roseobacter sp. CCS2] Length = 253 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 135/229 (58%), Positives = 180/229 (78%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM++YI+ RN HI+DL+QTVPML +ALQV+ DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQTARWNPKMDQYIYGSRNGIHIMDLTQTVPMLDQALQVVRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA+ +MEAA++SAQ+ +N +WLGG +TNW+TVSQSI +L+ ++E Sbjct: 61 RVLFVGTKRQAAKPIMEAAEKSAQFYMNHRWLGGTLTNWQTVSQSINRLKAIDEASANGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E LAI EA +L IP+VA+ Sbjct: 121 AGLTKKERLGMEREQGKLQASLGGIREMGGVPDLLFVIDCNKEDLAIAEANKLGIPVVAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 VDTN +P VDYVIPGNDD++R+IAL+ DL A AA+DG+ Q G D Sbjct: 181 VDTNCSPAGVDYVIPGNDDAARAIALYTDLAARAALDGMTAQMGAAGID 229 >gi|254511567|ref|ZP_05123634.1| ribosomal protein S2 [Rhodobacteraceae bacterium KLH11] gi|221535278|gb|EEE38266.1| ribosomal protein S2 [Rhodobacteraceae bacterium KLH11] Length = 260 Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 135/238 (56%), Positives = 180/238 (75%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQ + DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQTQRWNPRMGPFIYGSRNGIHIMDLTQTVPMLDQALQAVRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA+ + +AA++SAQY +N +WLGG +TNWKTVSQSI +L ++E + Sbjct: 61 RVLFVGTKRQAAQPIADAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLNQIDEAMESGA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L IP+VAV Sbjct: 121 EGLTKKERLGMERDQQKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 VDTN +PD VDY+IPGNDD++R+IAL+CDL A AA+DG+ Q G D + E V Sbjct: 181 VDTNCSPDGVDYIIPGNDDAARAIALYCDLAARAALDGMTAQMGAAGVDLGAFEEAPV 238 >gi|315499829|ref|YP_004088632.1| ribosomal protein s2 [Asticcacaulis excentricus CB 48] gi|315417841|gb|ADU14481.1| ribosomal protein S2 [Asticcacaulis excentricus CB 48] Length = 255 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 132/237 (55%), Positives = 184/237 (77%), Gaps = 3/237 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+ ++R LLE+G FGH+ WNPKMERY+F R+N HIIDLSQT+P+L +AL + Sbjct: 1 MAMPELSMRALLEAGAHFGHQTHRWNPKMERYLFGSRSNIHIIDLSQTLPLLHQALLKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QA+ V AAKRSAQY VN +WLGG +TNW+T+S SI +LR+LE Sbjct: 61 EVAANGGRVLFVGTKRQAAGPVAVAAKRSAQYYVNHRWLGGTLTNWRTISGSIARLRELE 120 Query: 121 ELLNKENQ-GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +++ EN G +KKE L + R+RDKL+ +L GI+DMGG+PDLMFV+DTN+E +AIQEAR+ Sbjct: 121 QVM--ENPVGRSKKELLTLTRERDKLELSLGGIKDMGGIPDLMFVIDTNKEAIAIQEARK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IP++ ++D+NS+PD + + +PGNDD++R++ L+CDL+A A +DG+A S G D Sbjct: 179 LNIPVIGILDSNSDPDGITFPVPGNDDAARALQLYCDLIADAVLDGLAAGQSASGID 235 >gi|296536129|ref|ZP_06898258.1| 30S ribosomal protein S2 [Roseomonas cervicalis ATCC 49957] gi|296263541|gb|EFH10037.1| 30S ribosomal protein S2 [Roseomonas cervicalis ATCC 49957] Length = 274 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 135/242 (55%), Positives = 180/242 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+ ++RQLLE+GV FGH WNP+M YIF RN HI+DL QTVPM+ +AL+ I Sbjct: 1 MAMPEVSLRQLLEAGVHFGHHTRRWNPRMAPYIFGVRNQVHILDLQQTVPMMDRALRAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK A++ V EAA R QY VN +WLGGM+TNWKT++ SI++L+ ++ Sbjct: 61 DVVAGGGRVLFVGTKKSAAEYVAEAATRCGQYYVNHRWLGGMLTNWKTITGSIKRLKQMD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L QG TKKE L + R+R+KL RAL GIR+MGGLPD++FV+D +EKLAI+EA +L Sbjct: 121 EQLGGNTQGLTKKEVLMLTREREKLDRALGGIREMGGLPDIIFVIDVVKEKLAIEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVD+N++P+ V + IPGNDD+ R+I L+CD+VA+A DGI+ + G D S Sbjct: 181 GIPVVAVVDSNADPEGVAFPIPGNDDAIRAINLYCDMVAAAVFDGISAELQASGVDLGSV 240 Query: 241 GE 242 E Sbjct: 241 EE 242 >gi|329850616|ref|ZP_08265461.1| ribosomal protein S2 [Asticcacaulis biprosthecum C19] gi|328840931|gb|EGF90502.1| ribosomal protein S2 [Asticcacaulis biprosthecum C19] Length = 266 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 130/240 (54%), Positives = 180/240 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+ ++R LLE+G FGH+ WNPKMERY+F R+N HIIDLSQT+P+ +AL Sbjct: 1 MAMPEISMRLLLEAGAHFGHQTHRWNPKMERYLFGARSNIHIIDLSQTLPLFHQALLKAR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QA V AAKRSAQY VN +WLGG +TNW+T+S SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQAQGPVAVAAKRSAQYYVNHRWLGGTLTNWRTISGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L+ G +KKE L + R+R+KL+ +L GI+DMGG+PDLMFV+DTN+E +AIQEAR+L Sbjct: 121 NVLDSNPAGRSKKELLTLTREREKLELSLGGIKDMGGIPDLMFVIDTNKESIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++ ++D+NS+PD + Y +PGNDD++R++ L+CDL+A A +DG+A G D +A Sbjct: 181 NIPVIGILDSNSDPDGITYPVPGNDDAARALQLYCDLIADAVLDGLAAGQVASGVDLGAA 240 >gi|209545460|ref|YP_002277689.1| 30S ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] gi|221222512|sp|A9HRQ9|RS2_GLUDA RecName: Full=30S ribosomal protein S2 gi|209533137|gb|ACI53074.1| ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] Length = 260 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 139/247 (56%), Positives = 190/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML +AL+ I Sbjct: 1 MAMPDFTMRQLLEAGVHFGHHTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLDRALKAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D + EAAKRS QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DTVAGGGRVLFVGTKRAAADQIAEAAKRSGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L + G TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L Sbjct: 121 DMLTGDTHGLTKKEILDITRNREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+NS+P V + IPGNDD+ R+IAL+C+LV+ A +DGI+ + G D +A Sbjct: 181 GIPVVAILDSNSDPRGVTFPIPGNDDAIRAIALYCELVSGAVLDGISAELGASGQDFGAA 240 Query: 241 GETVVHS 247 E V + Sbjct: 241 EELPVDT 247 >gi|83592921|ref|YP_426673.1| 30S ribosomal protein S2 [Rhodospirillum rubrum ATCC 11170] gi|123767063|sp|Q2RU09|RS2_RHORT RecName: Full=30S ribosomal protein S2 gi|29028250|gb|AAO62351.1| putative ribosomal protein S2 [Rhodospirillum rubrum] gi|83575835|gb|ABC22386.1| SSU ribosomal protein S2P [Rhodospirillum rubrum ATCC 11170] Length = 262 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 133/241 (55%), Positives = 178/241 (73%), Gaps = 1/241 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQL+E+G FGH WNPKM Y++ +R+N HIIDL QTVPML +A+Q + Sbjct: 1 MALPTFSMRQLIEAGCHFGHNTRRWNPKMAPYLYGQRDNVHIIDLQQTVPMLYRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A GGR+LFV TK QA D V E A+R QY VN +WLGGM+TNWKT+S SI++LRDLE Sbjct: 61 DVTAGGGRVLFVGTKRQAQDVVAEHARRCGQYYVNHRWLGGMLTNWKTISHSIKRLRDLE 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + G TKKE+LN+ R++DKL AL GI++MGGLPD++F++DT +E LA+ EA + Sbjct: 121 ERFGGGDLLGLTKKEQLNLGREKDKLDMALGGIKEMGGLPDMLFIIDTVKESLAVNEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L +P+VAV+D+NS+P + Y IPGNDD+ R+I +C+L++ AAIDGI Q G D + Sbjct: 181 LGLPVVAVIDSNSDPRGITYPIPGNDDAIRAIQTYCELISGAAIDGIQAQLGAAGVDVGA 240 Query: 240 A 240 A Sbjct: 241 A 241 >gi|296116244|ref|ZP_06834861.1| 30S ribosomal protein S2 [Gluconacetobacter hansenii ATCC 23769] gi|295977178|gb|EFG83939.1| 30S ribosomal protein S2 [Gluconacetobacter hansenii ATCC 23769] Length = 265 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 141/243 (58%), Positives = 187/243 (76%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P+FT+RQLLESGV FGH WNP+M ++F RN HIIDL QTVPML +AL+ I DT Sbjct: 1 MPEFTMRQLLESGVHFGHHTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLDRALKAIRDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR+LFV TK A+D + EAAKR QY VN +WLGGM+TNWKT++ SI++LR ++E+ Sbjct: 61 VAGGGRVLFVGTKRAAADQIAEAAKRCGQYYVNHRWLGGMLTNWKTITGSIKRLRGIDEM 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L QG TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L I Sbjct: 121 LENGTQGLTKKEVLDITRDREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VAV+D+NS+P V Y IPGNDD+ R+IAL+C+LV+ A +DGI+ + G D +A E Sbjct: 181 PVVAVLDSNSDPRGVTYPIPGNDDAIRAIALYCELVSGAVLDGISAELGASGEDFGAAEE 240 Query: 243 TVV 245 V Sbjct: 241 LPV 243 >gi|254469522|ref|ZP_05082927.1| ribosomal protein S2 [Pseudovibrio sp. JE062] gi|211961357|gb|EEA96552.1| ribosomal protein S2 [Pseudovibrio sp. JE062] Length = 258 Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 143/230 (62%), Positives = 181/230 (78%), Gaps = 1/230 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM YIF RNN HI+DL QTVP+L +AL+ +SDTVA GG Sbjct: 1 MRQLLEAGVHFGHQKHRWNPKMNNYIFGVRNNIHILDLGQTVPLLHQALKAVSDTVAAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+L V TK QA + V EAA+ SAQY VN++WLGGM+TNWKT+SQSIQ+LR +EELL+ + Sbjct: 61 RVLLVGTKRQAQEAVAEAARNSAQYYVNARWLGGMLTNWKTISQSIQRLRKVEELLDGGD 120 Query: 128 QG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKERL ++R+R KL+R L GI+DMGG+PDL+FV+DTNRE AIQEARRL IP+ A Sbjct: 121 ANRMTKKERLFLDRERQKLERNLGGIKDMGGIPDLIFVIDTNREANAIQEARRLGIPVAA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 ++D+N +PD + Y +PGNDD+ R+I L+ DL+A AAIDGIAR MG D Sbjct: 181 ILDSNCDPDGITYPVPGNDDAGRAITLYTDLIARAAIDGIARASGSMGID 230 >gi|114799137|ref|YP_760472.1| 30S ribosomal protein S2 [Hyphomonas neptunium ATCC 15444] gi|122942421|sp|Q0C1C1|RS2_HYPNA RecName: Full=30S ribosomal protein S2 gi|114739311|gb|ABI77436.1| ribosomal protein S2 [Hyphomonas neptunium ATCC 15444] Length = 263 Score = 294 bits (753), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 132/263 (50%), Positives = 192/263 (73%), Gaps = 1/263 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNP+M+ YI+ ER+ HI+DLS TVP L ++L + Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPRMKPYIYGERSGIHIMDLSHTVPALHQSLVFVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + V EAA+R AQY +N +WLGG +TNW TVS SI++LR+L Sbjct: 61 DTVAKGGRVLFVGTKRQAQEPVAEAAQRCAQYYMNHRWLGGTLTNWSTVSNSIKQLRELN 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L+++R+RDKL+++L GI DMGGLP + V+DTN+E +A+QEAR+ Sbjct: 121 AMFESGGGSGLTKKELLDLQRRRDKLQKSLGGIADMGGLPAAIVVIDTNKEAIAVQEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAV+DTN NP D+ PGNDD++R+I+L+C+L A A +DG+A + +G D + Sbjct: 181 LGIPVVAVLDTNCNPSDADFGFPGNDDAARAISLYCNLFADAVLDGLAESTAGLGVDLGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 + + + ++L ++ + E+ Sbjct: 241 SADIASLADADVKLADEEAAGEA 263 >gi|332186190|ref|ZP_08387936.1| ribosomal protein S2 [Sphingomonas sp. S17] gi|332014005|gb|EGI56064.1| ribosomal protein S2 [Sphingomonas sp. S17] Length = 269 Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 134/245 (54%), Positives = 182/245 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNPKM+ YIF +RN HI+DLSQTVP+ +AL+ IS Sbjct: 1 MAAPVVTMQQLVETGAHFGHQTHRWNPKMKPYIFGDRNGVHILDLSQTVPLFARALEFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA + V EAA+R+ Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 STVAGGGKVLFVGTKRQAQEPVAEAARRAGQHFVNHRWLGGMLTNWKTISNSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN+ R+RDKL+ +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTHGLTKKEVLNLTRERDKLELSLGGIRDMGGVPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD+SR+I L+C+ VA AA G Q GAD + Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCEAVAIAATRGNNEQQRRSGADFGAM 240 Query: 241 GETVV 245 E V Sbjct: 241 AEPPV 245 >gi|254462701|ref|ZP_05076117.1| ribosomal protein S2 [Rhodobacterales bacterium HTCC2083] gi|206679290|gb|EDZ43777.1| ribosomal protein S2 [Rhodobacteraceae bacterium HTCC2083] Length = 256 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 139/245 (56%), Positives = 183/245 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDAALNAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA+ V AA++ AQY +N +WLGG +TNWKTVSQSI +L+ ++ Sbjct: 61 DTVAKGGRILFVGTKRQAAAPVAAAAEQCAQYYMNHRWLGGTLTNWKTVSQSINRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EKFETGFEGLTKKERLGMERDQGKLQASLGGIREMGGVPDLIFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVD+N +PD +DY+IPGNDD++R+IAL+ DL A AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDSNCSPDGIDYIIPGNDDAARAIALYTDLAARAALDGMSAQLGAAGVDLGAM 240 Query: 241 GETVV 245 E V Sbjct: 241 EEAPV 245 >gi|254294079|ref|YP_003060102.1| ribosomal protein S2 [Hirschia baltica ATCC 49814] gi|254042610|gb|ACT59405.1| ribosomal protein S2 [Hirschia baltica ATCC 49814] Length = 286 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 141/241 (58%), Positives = 191/241 (79%), Gaps = 1/241 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNPKM+RYIF R+ HI+DLSQTVP+L +AL + Sbjct: 1 MALPEFTMRQLLEAGVHFGHQKHRWNPKMDRYIFGARSGIHILDLSQTVPLLHQALVQVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QAS+ V EAA+RSAQY +N +WLGG +TNW TVS SI++LR+L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASEAVAEAAERSAQYFMNDRWLGGTLTNWSTVSNSIKRLRELD 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +LL++ + G TKKE L + R+++KL+R L GIR+MGGLP +MFV+DTN+E +A++EAR+ Sbjct: 121 DLLSQGDGTGLTKKELLKLTREQEKLQRVLGGIRNMGGLPSIMFVIDTNKESIAVKEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN +PD VD+ IPGNDD++R+I L+ +L A A +DG+A +G D Sbjct: 181 LGIPVVAIVDTNCDPDEVDFPIPGNDDATRAIQLYTNLFADAVLDGLAESSMELGVDLGE 240 Query: 240 A 240 A Sbjct: 241 A 241 >gi|254439142|ref|ZP_05052636.1| ribosomal protein S2 [Octadecabacter antarcticus 307] gi|198254588|gb|EDY78902.1| ribosomal protein S2 [Octadecabacter antarcticus 307] Length = 259 Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 130/229 (56%), Positives = 177/229 (77%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ +I+ +RN HI+DL+QT+PML AL V+ DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQKQRWNPKMQEFIYGQRNGIHIMDLTQTLPMLDAALNVVRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA + EAA++SAQ+ +N +WLGG +TNW+T+S+ I KLR+++E + Sbjct: 61 RVLFVGTKRQAQTPIKEAAEKSAQFYMNHRWLGGTLTNWETISKRIAKLREIDEAAERGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER + KL+ +L GIRDMGG+PDL+FV+D N+E LAI EA +L IP+VAV Sbjct: 121 EGMTKKERLGMERIQGKLEASLGGIRDMGGVPDLLFVIDVNKEDLAIAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 VDTN +P +DY+IPGNDD++R+IAL+ DL A AA+DG+ Q G D Sbjct: 181 VDTNCSPSGIDYIIPGNDDAARAIALYTDLAARAALDGMTAQMGAAGID 229 >gi|144897594|emb|CAM74458.1| 30S ribosomal protein S2 [Magnetospirillum gryphiswaldense MSR-1] Length = 264 Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 130/246 (52%), Positives = 179/246 (72%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M++P F++RQL+E+GV FGH WNPKM ++F RN HIIDL Q+VPML A+ + Sbjct: 1 MSMPTFSMRQLVEAGVHFGHNTRRWNPKMAPFLFGIRNGIHIIDLQQSVPMLHAAMTAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + VA GGR+LFV TK ASD V EAAK+ QY VN +WLGGM+TNWKT+S SI++LR+L+ Sbjct: 61 NVVAGGGRVLFVGTKRAASDTVAEAAKKCGQYYVNHRWLGGMLTNWKTISHSIKRLRELD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L G TKKE+L + R+++KL RAL GI+DMGGLPD++F++DTN+E LA+QEA + Sbjct: 121 EMLASGTLAGLTKKEQLVLAREKEKLDRALGGIKDMGGLPDILFIIDTNKEALAVQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++D+NS+P V + +PGNDD+ R+I +CDL+ A +DGI + G D + Sbjct: 181 LGIPVVAILDSNSDPSGVQFPVPGNDDAIRAIQTYCDLMVGAVLDGIQAEIGRSGGDIGA 240 Query: 240 AGETVV 245 E V Sbjct: 241 QAEAPV 246 >gi|254451535|ref|ZP_05064972.1| ribosomal protein S2 [Octadecabacter antarcticus 238] gi|198265941|gb|EDY90211.1| ribosomal protein S2 [Octadecabacter antarcticus 238] Length = 259 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 127/229 (55%), Positives = 180/229 (78%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+++I+ +RN HI+DL+QT+PML AL V+ +TVA+GG Sbjct: 1 MRQLLEAGVHFGHQKQRWNPKMQKFIYGQRNGIHIMDLTQTLPMLDAALNVVRETVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA + +AA++SAQ+ +N +WLGG +TNW+TVS+SI +L++++E + Sbjct: 61 RVLFVGTKRQAQSPIKDAAEKSAQFYMNHRWLGGTLTNWQTVSKSILRLKNIDEAAERGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E LAI EA +L IP+VAV Sbjct: 121 EGLTKKERLGMEREQGKLEASLGGIREMGGVPDLLFVIDVNKEGLAIAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 VDTN +P +DY+IPGNDD++R+IAL+ DL A AA+DG+ Q G D Sbjct: 181 VDTNCSPSGIDYIIPGNDDAARAIALYTDLAARAALDGMTAQMGAAGID 229 >gi|307293421|ref|ZP_07573267.1| ribosomal protein S2 [Sphingobium chlorophenolicum L-1] gi|306881487|gb|EFN12703.1| ribosomal protein S2 [Sphingobium chlorophenolicum L-1] Length = 252 Score = 287 bits (735), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 134/249 (53%), Positives = 185/249 (74%), Gaps = 4/249 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T+ QL+E+G FGH+ WNP+M+ YIF ERN HI+DLSQTVP+ +AL +S Sbjct: 1 MAAPVVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA D + EAA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATVAAGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+R+KL+ +L GIRDM G+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EKLSGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSY--MGAD 236 IP+VA++D+N +PD + + +P NDD+SR+I L+CD +A+AA G A+Q S +GA Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAIAAAATKGNRGAQQASGVDLGAL 240 Query: 237 TKSAGETVV 245 + A E VV Sbjct: 241 DEPAAEEVV 249 >gi|294012402|ref|YP_003545862.1| ribosomal protein S2 [Sphingobium japonicum UT26S] gi|292675732|dbj|BAI97250.1| ribosomal protein S2 [Sphingobium japonicum UT26S] Length = 252 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 134/249 (53%), Positives = 185/249 (74%), Gaps = 4/249 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T+ QL+E+G FGH+ WNP+M+ YIF ERN HI+DLSQTVP+ +AL +S Sbjct: 1 MAAPVVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA D + EAA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATVAAGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+R+KL+ +L GIRDM G+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EKLSGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSY--MGAD 236 IP+VA++D+N +PD + + +P NDD+SR+I L+CD +A+AA G A+Q S +GA Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAIAAAATKGNRGAQQASGVDLGAL 240 Query: 237 TKSAGETVV 245 + A E VV Sbjct: 241 DEPAAEEVV 249 >gi|163731851|ref|ZP_02139298.1| 30S ribosomal protein S2 [Roseobacter litoralis Och 149] gi|161395305|gb|EDQ19627.1| 30S ribosomal protein S2 [Roseobacter litoralis Och 149] Length = 257 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 130/229 (56%), Positives = 174/229 (75%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQ I DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQAIRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + +AA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++E + Sbjct: 61 SILFVGTKRQAQQPIADAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAIDEQSERGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LA+ EA +L IP+VAV Sbjct: 121 EGLTKKERLGMERDQGKLQSSLGGIREMGGRPDLIFVIDVKKEALAVAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 VDTN PD +DY+IPGNDD+SR+I+L+CDL A AA+DG++ Q G D Sbjct: 181 VDTNCPPDGIDYIIPGNDDASRAISLYCDLAARAALDGMSAQLGAAGVD 229 >gi|329889356|ref|ZP_08267699.1| ribosomal protein S2 [Brevundimonas diminuta ATCC 11568] gi|328844657|gb|EGF94221.1| ribosomal protein S2 [Brevundimonas diminuta ATCC 11568] Length = 280 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 128/224 (57%), Positives = 179/224 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++R LLE+G FGH+ WNPKM+RYIF R+N HIIDLSQT+P+L +AL + Sbjct: 1 MALPEFSMRTLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTMPLLHQALVAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A+GGR+LFV TK QA+D V +AA R AQY +N++WLGG +TNW+TVS SIQ+LR+LE Sbjct: 61 DVAAKGGRVLFVGTKRQAADPVAQAATRCAQYYMNNRWLGGTLTNWRTVSNSIQRLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ +G KKE L ++R++D+L+ +L GI+DMG +PD+MFV+DTN+E +AIQEAR+L Sbjct: 121 GIVEGGGEGRNKKELLTLQREKDRLELSLGGIKDMGSVPDIMFVIDTNKEAIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+A++DTNS+PD + Y +PGNDD++R+I +CDL+A A +D Sbjct: 181 NIPIIAILDTNSDPDGITYPVPGNDDAARAIQTYCDLIADAVLD 224 >gi|149186821|ref|ZP_01865131.1| ribosomal protein S2 [Erythrobacter sp. SD-21] gi|148829488|gb|EDL47929.1| ribosomal protein S2 [Erythrobacter sp. SD-21] Length = 251 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 129/239 (53%), Positives = 173/239 (72%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQ+VP+ +AL IS Sbjct: 3 MAAPTVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHIIDLSQSVPLFARALDFIS 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T GG++LFV TK QA D + EAA + Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 63 QTARSGGKVLFVGTKRQAQDPIREAALAAGQHFVNHRWLGGMLTNWKTISGSIKELKTLE 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN+ RKRDKL+ +L GIR+MGG+PD+MFV+D N+E LAI+EA L Sbjct: 123 ETLSGDTSGLTKKEVLNLTRKRDKLELSLGGIRNMGGIPDVMFVIDANKEDLAIKEANVL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VAV+DTN +P+ + + IPGNDD++R+I L+CD V AA G + GAD + Sbjct: 183 GIPVVAVLDTNVDPNGIAFPIPGNDDAARAIKLYCDAVGEAARSGKGEGVTDSGADVGA 241 >gi|94496944|ref|ZP_01303518.1| ribosomal protein S2 [Sphingomonas sp. SKA58] gi|94423620|gb|EAT08647.1| ribosomal protein S2 [Sphingomonas sp. SKA58] Length = 252 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 123/225 (54%), Positives = 173/225 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P ++ QL+E+G FGH+ WNP+M+ YIF ERN HI+DLSQTVP+ +AL +S Sbjct: 1 MATPVVSMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA D + +AA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATVAAGGKVLFVGTKRQAQDPIADAARKSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+R+KL+ +L GIRDM G+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EKLSGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA++D+N +PD + + +P NDD+SR+I L+C+ VA+AA G Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCEAVAAAATKG 225 >gi|103487444|ref|YP_617005.1| 30S ribosomal protein S2 [Sphingopyxis alaskensis RB2256] gi|123379689|sp|Q1GRQ0|RS2_SPHAL RecName: Full=30S ribosomal protein S2 gi|98977521|gb|ABF53672.1| SSU ribosomal protein S2P [Sphingopyxis alaskensis RB2256] Length = 277 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 127/245 (51%), Positives = 176/245 (71%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++ L+E+G FGH+ WNP+M+ YIF RN HI+DLSQTVP+ +AL I+ Sbjct: 1 MAAPVVTMQNLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHILDLSQTVPLFARALDFIA 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T A GG++LFV TK QA + +AA+ S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 STAASGGKVLFVGTKRQAQGPIADAARASGQHFVNHRWLGGMLTNWKTISNSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN R+RDKL+ +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTSGLTKKEVLNKTRERDKLEMSLGGIRDMGGIPDVMFVIDANKEELAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD++R+I L+CD VA AA G + + G D +A Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDAARAIRLYCDAVAQAATRGGQQARADRGEDLGAA 240 Query: 241 GETVV 245 E V Sbjct: 241 VEPVA 245 >gi|148553384|ref|YP_001260966.1| 30S ribosomal protein S2 [Sphingomonas wittichii RW1] gi|166226758|sp|A5V3G2|RS2_SPHWW RecName: Full=30S ribosomal protein S2 gi|148498574|gb|ABQ66828.1| SSU ribosomal protein S2P [Sphingomonas wittichii RW1] Length = 250 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 125/243 (51%), Positives = 176/243 (72%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P +++ LL++G FGH+ WNPKM+ Y+F +RN HIIDLSQTVP++ +AL +IS Sbjct: 1 MAAPTVSMQALLDAGAHFGHQTHRWNPKMKPYLFGDRNGIHIIDLSQTVPLMARALDLIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + EAA+RS Q+ VN +WLGGM+TNWKT+S SI++ + LE Sbjct: 61 QTVQHGGKVLFVGTKRQAQEPIAEAARRSGQHYVNHRWLGGMLTNWKTISNSIKRFKALE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE L + R+RDK + +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTHGLTKKEVLQLTRERDKFELSLGGIRDMGGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD++R+I L+C+ VA AA G G D +A Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDAARAIRLYCEAVAEAATRGAQGGRQARGEDLGAA 240 Query: 241 GET 243 E Sbjct: 241 VEA 243 >gi|56552052|ref|YP_162891.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241762006|ref|ZP_04760090.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752415|ref|YP_003225308.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|7388197|sp|Q9X5E7|RS2_ZYMMO RecName: Full=30S ribosomal protein S2 gi|4768860|gb|AAD29654.1|AF124757_14 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4] gi|56543626|gb|AAV89780.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241373472|gb|EER63059.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258551778|gb|ACV74724.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 250 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 125/236 (52%), Positives = 175/236 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P T++ LL+ G FGH+ WNPKM+ YIF +RN HI+DLSQTVP+ +AL IS Sbjct: 1 MAVPTVTMQSLLDVGAHFGHQTHRWNPKMKPYIFGDRNGIHIMDLSQTVPLFTRALDFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA + + +AA+RS Q+ VN +WLGGM+TNW+T+S SI++L+ LE Sbjct: 61 QTVAHGGKVLFVGTKRQAQEPIADAARRSGQFFVNHRWLGGMLTNWRTISGSIKRLKSLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+RDKL+ +L GIRDMG +PD+MFVVD N+E+LAI+EA L Sbjct: 121 EKLSGDTAGFTKKEILQLTRERDKLELSLGGIRDMGTIPDIMFVVDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA++D+N +PD + + IP NDD++R++ +CD +A AA G + +G D Sbjct: 181 GIPVVAILDSNVSPDGIAFPIPANDDAARAVRYYCDAIAEAATRGDQQNRQELGED 236 >gi|87199390|ref|YP_496647.1| 30S ribosomal protein S2 [Novosphingobium aromaticivorans DSM 12444] gi|123763562|sp|Q2G8L0|RS2_NOVAD RecName: Full=30S ribosomal protein S2 gi|87135071|gb|ABD25813.1| SSU ribosomal protein S2P [Novosphingobium aromaticivorans DSM 12444] Length = 251 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 121/225 (53%), Positives = 169/225 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T+ QL+E+G FGH+ WNP+M+ YIF RN HI+DLSQTVP++ +AL+ IS Sbjct: 1 MAAPVVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHILDLSQTVPLMARALEFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + +AA+ S Q+ VN +WLGGM+TNWKT+S SI++ + LE Sbjct: 61 ATVQAGGKVLFVGTKRQAQEPIAQAARASGQHYVNHRWLGGMLTNWKTISGSIKRFKALE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + G TKKE L + R+RDK + +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLAGDTAGLTKKEVLQLTRERDKFELSLGGIRDMGGIPDVMFVIDANKEELAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA++D+N +P+ + + IP NDD+SR+I L+C+ VA+AA G Sbjct: 181 GIPVVAILDSNVSPEGIAFPIPANDDASRAIRLYCEAVAAAATKG 225 >gi|162007985|ref|YP_457642.2| 30S ribosomal protein S2 [Erythrobacter litoralis HTCC2594] gi|209573716|sp|Q2NBU6|RS2_ERYLH RecName: Full=30S ribosomal protein S2 Length = 245 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 120/222 (54%), Positives = 166/222 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP++ +AL + Sbjct: 1 MAAPTVTMQQLIEAGSHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVH 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T GG++LFV TK QA + + EAA+ S Q+ VN +WLGGM+TNW+T+S+SI++L+ LE Sbjct: 61 ATANAGGKVLFVGTKRQAQEPIAEAARSSGQHFVNHRWLGGMLTNWQTISKSIKELKSLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ E G TKKE LN+ RKRDKL+ +L GIRDMGG+PD+M V+D N+E LAI+EA L Sbjct: 121 EQLSGETHGLTKKEVLNLTRKRDKLELSLGGIRDMGGVPDVMVVIDANKEDLAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP+V ++DTN +P + + +PGNDD++R++ L+CD A AA Sbjct: 181 GIPVVGILDTNVDPSGIAFPVPGNDDAARAVRLYCDAFAQAA 222 >gi|34580930|ref|ZP_00142410.1| 30S ribosomal protein S2 [Rickettsia sibirica 246] gi|229586324|ref|YP_002844825.1| 30S ribosomal protein S2 [Rickettsia africae ESF-5] gi|259495223|sp|C3PMC2|RS2_RICAE RecName: Full=30S ribosomal protein S2 gi|28262315|gb|EAA25819.1| 30S ribosomal protein S2 [Rickettsia sibirica 246] gi|228021374|gb|ACP53082.1| 30S ribosomal protein S2 [Rickettsia africae ESF-5] Length = 295 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 131/251 (52%), Positives = 175/251 (69%), Gaps = 5/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE LN+ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETVVHSKEGM 251 E H+ +G+ Sbjct: 244 QE---HTDKGL 251 >gi|85708120|ref|ZP_01039186.1| ribosomal protein S2 [Erythrobacter sp. NAP1] gi|85689654|gb|EAQ29657.1| ribosomal protein S2 [Erythrobacter sp. NAP1] Length = 256 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 121/225 (53%), Positives = 168/225 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP+ +AL + Sbjct: 1 MAATTVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGNRNGVHIIDLSQTVPLFARALDFVE 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + EAA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 QTVRAGGKVLFVGTKRQAQEPIAEAARQSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+RDKL+ +L GIRDMGG+PD+MFV+D N+E LAI+EA L Sbjct: 121 EQLSGDTSGFTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEDLAIKEAAVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AV+DTN +P + + +PGNDD+SR++ L+C ++ AA G Sbjct: 181 GIPVIAVLDTNVDPTGIAFPVPGNDDASRAVRLYCQAISDAANAG 225 >gi|157803269|ref|YP_001491818.1| 30S ribosomal protein S2 [Rickettsia canadensis str. McKiel] gi|166226748|sp|A8EXF0|RS2_RICCK RecName: Full=30S ribosomal protein S2 gi|157784532|gb|ABV73033.1| 30S ribosomal protein S2 [Rickettsia canadensis str. McKiel] Length = 295 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 128/236 (54%), Positives = 169/236 (71%), Gaps = 2/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMGSYIYGERDDVHIIDLRQSAVLMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LGNEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+A G D Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLAESMKASGVD 239 >gi|326388630|ref|ZP_08210223.1| 30S ribosomal protein S2 [Novosphingobium nitrogenifigens DSM 19370] gi|326206881|gb|EGD57705.1| 30S ribosomal protein S2 [Novosphingobium nitrogenifigens DSM 19370] Length = 251 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 121/225 (53%), Positives = 170/225 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HI+DLSQTVP+ +AL IS Sbjct: 1 MAAPVVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGVRNGIHILDLSQTVPLFARALDFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + +AA+ + Q+ VN +WLGGM+TNWKT+S SI++ + LE Sbjct: 61 ATVQAGGKVLFVGTKRQAQEPIAQAARAAGQHYVNHRWLGGMLTNWKTISGSIKRFKALE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE L + R+RDKL+ +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTAGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEELAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA++D+N +P+ + + IP NDD+SR+I L+C+ VA+AA G Sbjct: 181 GIPVVAILDSNVSPEGIAFPIPANDDASRAIRLYCEAVAAAATRG 225 >gi|15892035|ref|NP_359749.1| 30S ribosomal protein S2 [Rickettsia conorii str. Malish 7] gi|20139896|sp|Q92JF5|RS2_RICCN RecName: Full=30S ribosomal protein S2 gi|15619153|gb|AAL02650.1| 30S ribosomal protein S2 [Rickettsia conorii str. Malish 7] Length = 295 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 130/251 (51%), Positives = 175/251 (69%), Gaps = 5/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE LN+ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS R+I L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRAIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETVVHSKEGM 251 E H+ +G+ Sbjct: 244 QE---HTDKGL 251 >gi|209573694|sp|A8F0I9|RS2_RICM5 RecName: Full=30S ribosomal protein S2 Length = 295 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 127/236 (53%), Positives = 169/236 (71%), Gaps = 2/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVD 239 >gi|239947073|ref|ZP_04698826.1| ribosomal protein S2 [Rickettsia endosymbiont of Ixodes scapularis] gi|239921349|gb|EER21373.1| ribosomal protein S2 [Rickettsia endosymbiont of Ixodes scapularis] Length = 295 Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 132/271 (48%), Positives = 184/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E ++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYTEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE +++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LESEEALMGYTKKEIIDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GE---TVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +DG+ Sbjct: 244 QEHTDKALTSKNVSKLKQAKKFSKTKNIDGE 274 >gi|157964148|ref|YP_001498972.1| 30S ribosomal protein S2 [Rickettsia massiliae MTU5] gi|157843924|gb|ABV84425.1| 30S ribosomal protein S2 [Rickettsia massiliae MTU5] Length = 312 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 127/236 (53%), Positives = 169/236 (71%), Gaps = 2/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 21 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 80 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 81 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 140 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 141 LENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 200 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D Sbjct: 201 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVD 256 >gi|91761975|ref|ZP_01263940.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1002] gi|91717777|gb|EAS84427.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1002] Length = 273 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 121/218 (55%), Positives = 166/218 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P TI+QLLE+GV GH+ WNPKM++YIF +R++ HIIDL+QT+ + AL+ + Sbjct: 1 MKIPSLTIQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTNVALEKVY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +T+A G+ILFV+TK QAS+ + E AK + QY VN +WLGGM+TNW T+S SI+K++ E Sbjct: 61 NTIANNGKILFVSTKKQASEAIAEVAKETGQYFVNYRWLGGMLTNWGTISGSIKKMKKYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L EN+GFTKKE L + K+DKL+RAL GI +M +PDL+F++DTN E LAI EA +L Sbjct: 121 ADLVAENRGFTKKELLKMSVKKDKLERALGGIAEMKKVPDLVFIIDTNYESLAIAEASKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 IPI A++D+NSNPD +DY IPGNDD+ R+I L+C+LV Sbjct: 181 GIPICAILDSNSNPDGIDYPIPGNDDARRAIDLYCNLV 218 >gi|238650547|ref|YP_002916399.1| 30S ribosomal protein S2 [Rickettsia peacockii str. Rustic] gi|259495224|sp|C4K1A0|RS2_RICPU RecName: Full=30S ribosomal protein S2 gi|238624645|gb|ACR47351.1| 30S ribosomal protein S2 [Rickettsia peacockii str. Rustic] Length = 295 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 130/251 (51%), Positives = 174/251 (69%), Gaps = 5/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L + RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILYMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETVVHSKEGM 251 E H+ +G+ Sbjct: 244 QE---HTDKGL 251 >gi|71083604|ref|YP_266323.1| 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1062] gi|71062717|gb|AAZ21720.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1062] Length = 273 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 121/218 (55%), Positives = 166/218 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P TI+QLLE+GV GH+ WNPKM++YIF +R++ HIIDL+QT+ + AL+ + Sbjct: 1 MKIPSLTIQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTNVALEKVY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +T+A G+ILFV+TK QAS+ + E AK + QY VN +WLGGM+TNW T+S SI+K++ E Sbjct: 61 NTIANNGKILFVSTKKQASEAIAEVAKETGQYFVNYRWLGGMLTNWGTISGSIKKMKKYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L EN+GFTKKE L + K+DKL+RAL GI +M +PDL+F++DTN E LAI EA +L Sbjct: 121 ADLVAENRGFTKKELLKMSVKKDKLERALGGIAEMKKVPDLVFIIDTNYESLAIAEASKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 IPI A++D+NSNPD +DY IPGNDD+ R+I L+C+LV Sbjct: 181 GIPICAILDSNSNPDGIDYPIPGNDDARRAIDLYCNLV 218 >gi|157827988|ref|YP_001494230.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932681|ref|YP_001649470.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Iowa] gi|166226749|sp|A8GQP7|RS2_RICRS RecName: Full=30S ribosomal protein S2 gi|189045001|sp|B0BW38|RS2_RICRO RecName: Full=30S ribosomal protein S2 gi|157800469|gb|ABV75722.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907768|gb|ABY72064.1| SSU ribosomal protein S2P [Rickettsia rickettsii str. Iowa] Length = 295 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 129/251 (51%), Positives = 175/251 (69%), Gaps = 5/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ +R++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGKRDDVHIIDLRQSVALMNVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETVVHSKEGM 251 E H+ +G+ Sbjct: 244 QE---HTDKGL 251 >gi|218661974|ref|ZP_03517904.1| 30S ribosomal protein S2 [Rhizobium etli IE4771] Length = 262 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 124/176 (70%), Positives = 151/176 (85%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+SDTVARGG Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+E+L E Sbjct: 61 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILGGEA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+ R P Sbjct: 121 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAQAPRHP 176 >gi|296284724|ref|ZP_06862722.1| 30S ribosomal protein S2 [Citromicrobium bathyomarinum JL354] Length = 247 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 118/222 (53%), Positives = 166/222 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP++ +AL ++ Sbjct: 1 MAAPTVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVA 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T G++LFV TK QA + V EAA+ S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATAQAKGKVLFVGTKRQAQEPVAEAARMSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN+ R+RDKL+ +L GIRDMGG+PD+M V+D N+E LAI+EA L Sbjct: 121 EQLSGDTSGLTKKEVLNLTRERDKLELSLGGIRDMGGIPDVMIVIDANKEDLAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP++AV+D+N++P + + +PGNDD++R++ L+CD AA Sbjct: 181 GIPVIAVLDSNTDPTGIAFPVPGNDDAARAVRLYCDAFGEAA 222 >gi|67458461|ref|YP_246085.1| 30S ribosomal protein S2 [Rickettsia felis URRWXCal2] gi|75537069|sp|Q4UND8|RS2_RICFE RecName: Full=30S ribosomal protein S2 gi|67003994|gb|AAY60920.1| 30S ribosomal protein S2 [Rickettsia felis URRWXCal2] Length = 295 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 125/236 (52%), Positives = 168/236 (71%), Gaps = 2/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNTIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK++KL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +PIVAVVDTNSNPD V+Y IPGNDDS RSI L+C L A AA+ G+ G D Sbjct: 184 NVPIVAVVDTNSNPDNVNYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVD 239 >gi|254455660|ref|ZP_05069089.1| ribosomal protein S2 [Candidatus Pelagibacter sp. HTCC7211] gi|207082662|gb|EDZ60088.1| ribosomal protein S2 [Candidatus Pelagibacter sp. HTCC7211] Length = 272 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 117/218 (53%), Positives = 167/218 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P+ TI+QLLE+GV GH+ WNPKM++YIF +R++ HIIDL+QT+ + + AL+ + Sbjct: 1 MKIPEITIQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTKVALEKVY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +A G+ILFV+TK QAS+ + E AK + QY VN +WLGGM+TNW T+S SI+K++ E Sbjct: 61 NIIANNGKILFVSTKKQASEAIAEVAKETDQYFVNYRWLGGMLTNWGTISGSIKKMKKYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L EN+GFTKKE L + K+DKL+R+L GI +M PDL+F++DTN E LAI E+ +L Sbjct: 121 TALAAENRGFTKKELLKMSVKKDKLERSLGGIAEMKKTPDLVFIIDTNYESLAIAESVKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 IPI+A++D+NSNPD +DY IPGNDD+ R+I L+C+L+ Sbjct: 181 GIPIIAILDSNSNPDNIDYPIPGNDDARRAIDLYCNLI 218 >gi|88606909|ref|YP_505002.1| 30S ribosomal protein S2 [Anaplasma phagocytophilum HZ] gi|123750113|sp|Q2GKU9|RS2_ANAPZ RecName: Full=30S ribosomal protein S2 gi|88597972|gb|ABD43442.1| ribosomal protein S2 [Anaplasma phagocytophilum HZ] Length = 296 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 124/227 (54%), Positives = 167/227 (73%), Gaps = 2/227 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVI 59 ++P+F+IR L+E+GV GH+ WNP M YI+ + HIIDL +T +L+ AL V+ Sbjct: 3 SIPEFSIRDLMEAGVHLGHKAGRWNPAMAPYIYGVHRYKDIHIIDLRKTAVLLRNALSVL 62 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 D V R GR+LFV TK QAS+ + E A R QY VN +WLGGM+TNW+TVS SI++L D Sbjct: 63 YDVVHRRGRVLFVGTKVQASNVIAEEAARCGQYYVNHRWLGGMLTNWETVSSSIRRLLDF 122 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LLN + FTKKE L ++KR+KL+R+L GIR+MGGLP ++FV+DTN+E +AIQEA + Sbjct: 123 EKLLNDTDAKFTKKELLMFDKKREKLERSLGGIREMGGLPHILFVIDTNKEHIAIQEANK 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 L+IP+VAV+DTNS+P VDY IPGNDDS RSI FC V++ ++ I Sbjct: 183 LKIPVVAVLDTNSDPRGVDYPIPGNDDSIRSIDFFCRAVSNTILEAI 229 >gi|83952013|ref|ZP_00960745.1| 30S ribosomal protein S2 [Roseovarius nubinhibens ISM] gi|83837019|gb|EAP76316.1| 30S ribosomal protein S2 [Roseovarius nubinhibens ISM] Length = 260 Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 122/235 (51%), Positives = 173/235 (73%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVPML AL I DT A+GGR+LFV TK QA+ V EAA++ Sbjct: 1 MGEFIYGARNGIHIMDLTQTVPMLDAALNAIRDTAAKGGRVLFVGTKRQAAGPVAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 SAQ+ +N +WLGG +TNW+TVSQSI++L++++E L +G TKKERL IER ++KL+ + Sbjct: 61 SAQFYMNHRWLGGTLTNWQTVSQSIKRLKEIDEALEGGAEGLTKKERLGIERDQEKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG+PD++FV+D +E LA+ EA +L IP+VAVVDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGVPDMLFVIDVKKEALAVAEANKLGIPVVAVVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESS 263 R+I+L+CDLV+ AA+DG++ Q G D + E V +E + S E++ Sbjct: 181 RAISLYCDLVSRAALDGMSAQMGAAGVDLGALAEAPVEETLSDGVETGNVSDETA 235 >gi|91206097|ref|YP_538452.1| 30S ribosomal protein S2 [Rickettsia bellii RML369-C] gi|157826470|ref|YP_001495534.1| 30S ribosomal protein S2 [Rickettsia bellii OSU 85-389] gi|123388083|sp|Q1RH01|RS2_RICBR RecName: Full=30S ribosomal protein S2 gi|166226747|sp|A8GUK1|RS2_RICB8 RecName: Full=30S ribosomal protein S2 gi|91069641|gb|ABE05363.1| 30S ribosomal protein S2 [Rickettsia bellii RML369-C] gi|157801774|gb|ABV78497.1| 30S ribosomal protein S2 [Rickettsia bellii OSU 85-389] Length = 291 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 127/242 (52%), Positives = 166/242 (68%), Gaps = 2/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LL++GV FGH+ WNPKM YI+ ER+ HIIDL QT ++ AL I +T Sbjct: 4 IPPVNVKDLLDAGVHFGHKTSRWNPKMAPYIYGERDEVHIIDLRQTAALMNVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G++LFV+TK QASD + E A++ QY VN +WLGGM+TNWKT+S SI+KL LE+ Sbjct: 64 VKNDGKVLFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTISGSIEKLNKLEQT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ ++DTN+E +AI EA RL Sbjct: 124 LENEEACIGYTKKEILDMNRKKDKLLLSLAGIRELHSKPDLIVIIDTNKEHIAISEAVRL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVAVVDTNSNPD +DY IPGNDD+ RSI +C L A AA+ G+ G D S Sbjct: 184 DIPIVAVVDTNSNPDHIDYPIPGNDDAIRSIRFYCSLFADAALQGLEESMKASGVDLGSI 243 Query: 241 GE 242 E Sbjct: 244 QE 245 >gi|84786663|gb|ABC62845.1| ribosomal protein S2 [Erythrobacter litoralis HTCC2594] Length = 238 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 116/215 (53%), Positives = 162/215 (75%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP++ +AL + T GG Sbjct: 1 MQQLIEAGSHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVHATANAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA + + EAA+ S Q+ VN +WLGGM+TNW+T+S+SI++L+ LEE L+ E Sbjct: 61 KVLFVGTKRQAQEPIAEAARSSGQHFVNHRWLGGMLTNWQTISKSIKELKSLEEQLSGET 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 G TKKE LN+ RKRDKL+ +L GIRDMGG+PD+M V+D N+E LAI+EA L IP+V + Sbjct: 121 HGLTKKEVLNLTRKRDKLELSLGGIRDMGGVPDVMVVIDANKEDLAIKEANVLGIPVVGI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 +DTN +P + + +PGNDD++R++ L+CD A AA Sbjct: 181 LDTNVDPSGIAFPVPGNDDAARAVRLYCDAFAQAA 215 >gi|57239236|ref|YP_180372.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] gi|58579198|ref|YP_197410.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] gi|58617251|ref|YP_196450.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Gardel] gi|75507503|sp|Q5FGZ8|RS2_EHRRG RecName: Full=30S ribosomal protein S2 gi|81672800|sp|Q5HB22|RS2_EHRRW RecName: Full=30S ribosomal protein S2 gi|57161315|emb|CAH58238.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] gi|58416863|emb|CAI27976.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Gardel] gi|58417824|emb|CAI27028.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] Length = 286 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 123/268 (45%), Positives = 186/268 (69%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP+FT+R L+E GV FGH+ WNPKM YI+ N+ HII+L TV +L+ AL + D Sbjct: 4 LPKFTMRDLVECGVHFGHKTSRWNPKMAPYIYGVHNDIHIINLQSTVFLLKNALSALYDI 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + GR+LF+ TK QAS + + A R QY +N++WLGGM+TNW+T+S SI+KLR+ E+L Sbjct: 64 VLKRGRVLFIGTKVQASAIIADEATRCGQYYINNRWLGGMLTNWETISLSIKKLREYEKL 123 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + FTKKE L E+KR KL R++ GI +MGGLP ++FV+DTN+E++AI+EA +L I Sbjct: 124 LQNVDNQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHVIFVIDTNKERIAIREANKLNI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++AV+DTNS+P +DY IPGNDD+ RSI FC +++ ++ I + G + + Sbjct: 184 PVIAVLDTNSDPTGIDYPIPGNDDAVRSIDFFCKIISDTILEAIRSDLAKSGINVDGIKD 243 Query: 243 TVVHSKEG-MQLEEDSQSSESSVLDGQE 269 V +E +++ +D++S++S+ ++ E Sbjct: 244 FSVERREDFLKMNKDNKSNKSNTINADE 271 >gi|330814007|ref|YP_004358246.1| SSU ribosomal protein S2p (SAe) [Candidatus Pelagibacter sp. IMCC9063] gi|327487102|gb|AEA81507.1| SSU ribosomal protein S2p (SAe) [Candidatus Pelagibacter sp. IMCC9063] Length = 267 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 127/264 (48%), Positives = 180/264 (68%), Gaps = 6/264 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LP TI+ LLE+GV GH+ F WNPKM+ +IF E+N+ HIIDLSQT+ +L KAL + Sbjct: 1 MNLPSVTIKDLLEAGVHLGHKTFRWNPKMKPFIFGEKNSVHIIDLSQTLELLNKALLELH 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + G+ILFV+TK QAS+ V AK + + VN +WLGGM+TNW T+++SI++L+ +E Sbjct: 61 RCASNNGKILFVSTKKQASELVANVAKETNNFYVNHRWLGGMLTNWNTINKSIKRLKRIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L E+ GFTKKE + + +++KL R+L GI +M LPD++F++DTN E LA+ EA++L Sbjct: 121 EDLKLEDTGFTKKELIKMSMEKEKLDRSLGGIANMKKLPDMIFIIDTNIESLAVLEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV------ASAAIDGIARQHSYMG 234 IPIVAVVD+NSNP+ +D+ IPGNDD+ RSI L+CDL A + + G Q S + Sbjct: 181 NIPIVAVVDSNSNPEFIDFPIPGNDDARRSIDLYCDLALKTIQDAQSKMSGDKDQVSNIS 240 Query: 235 ADTKSAGETVVHSKEGMQLEEDSQ 258 ++ E SK + LE D + Sbjct: 241 DISEKVSEIKKESKPEVSLEIDKK 264 >gi|15603964|ref|NP_220479.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Madrid E] gi|6226099|sp|Q9ZE61|RS2_RICPR RecName: Full=30S ribosomal protein S2 gi|3860655|emb|CAA14556.1| 30S RIBOSOMAL PROTEIN S2 (rpsB) [Rickettsia prowazekii] gi|292571678|gb|ADE29593.1| 30S ribosomal protein S2 [Rickettsia prowazekii Rp22] Length = 296 Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 125/236 (52%), Positives = 167/236 (70%), Gaps = 2/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 ISPINIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN++WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKLEKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E +TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LESEEARICYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D Sbjct: 184 NIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKVSGVD 239 >gi|84684968|ref|ZP_01012868.1| 30S ribosomal protein S2 [Maritimibacter alkaliphilus HTCC2654] gi|84667303|gb|EAQ13773.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2654] Length = 228 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 123/211 (58%), Positives = 161/211 (76%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ ERN HI DL+QTVPML AL VI +TVA+ GRILFV TK QAS + EAA++ Sbjct: 1 MGEFIYGERNGIHIFDLTQTVPMLDAALNVIRETVAKNGRILFVGTKRQASKPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 SAQY +N +WLGG +TNW+TVSQSI +L+ +E L +G TKKERL +ER ++KL + Sbjct: 61 SAQYYMNHRWLGGTLTNWQTVSQSINRLKAYDEQLAAGAEGLTKKERLGMERDQEKLTLS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG PDL+FV+D N+E LAI+EA +L IP+VAVVD+N +PD VDY+IPGNDD++ Sbjct: 121 LGGIREMGGRPDLLFVIDVNKEDLAIKEANKLGIPVVAVVDSNCSPDGVDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKS 239 R+IAL+CDL A AA+DG++ Q G D + Sbjct: 181 RAIALYCDLAARAALDGMSGQLEAAGIDVGA 211 >gi|51473262|ref|YP_067019.1| 30S ribosomal protein S2 [Rickettsia typhi str. Wilmington] gi|61215503|sp|Q68XV5|RS2_RICTY RecName: Full=30S ribosomal protein S2 gi|51459574|gb|AAU03537.1| 30S ribosomal protein S2 [Rickettsia typhi str. Wilmington] Length = 295 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 125/239 (52%), Positives = 168/239 (70%), Gaps = 2/239 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +TV + Sbjct: 7 INIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYETVKK 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G+ILFV+TK QASD + E A++ QY VN++WLGGM+TNWKT++ SI+KL LE+ L Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKLEKTLES 126 Query: 126 ENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E +TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L IP Sbjct: 127 EETRVCYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKLNIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 IVAVVDTNSNPD ++Y IPGNDDS RSI L+C L A AA+ G+ G D + E Sbjct: 187 IVAVVDTNSNPDNINYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKVSGVDIGTMQE 245 >gi|157825245|ref|YP_001492965.1| 30S ribosomal protein S2 [Rickettsia akari str. Hartford] gi|166226746|sp|A8GM32|RS2_RICAH RecName: Full=30S ribosomal protein S2 gi|157799203|gb|ABV74457.1| 30S ribosomal protein S2 [Rickettsia akari str. Hartford] Length = 295 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/244 (51%), Positives = 170/244 (69%), Gaps = 6/244 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 ISSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G++LFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKVLFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKENQ----GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L EN G+TKKE L++ RK++KL +L GIR++ PDL+ V+DTN+E +AI EA Sbjct: 124 L--ENAEALIGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAV 181 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D Sbjct: 182 KLNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCRLFADAALQGLEESMKASGVDMG 241 Query: 239 SAGE 242 + E Sbjct: 242 AMHE 245 >gi|225677377|ref|ZP_03788347.1| ribosomal protein S2 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590585|gb|EEH11842.1| ribosomal protein S2 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 282 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 164/226 (72%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ T+R L ESGV FGH+ WN KM YI+ + N HIIDL +T+P+LQ A++ + Sbjct: 4 LPKVTVRDLAESGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQVAMKALY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVVFQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPIVA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI Sbjct: 184 GIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGI 229 >gi|254500621|ref|ZP_05112772.1| ribosomal protein S2 [Labrenzia alexandrii DFL-11] gi|222436692|gb|EEE43371.1| ribosomal protein S2 [Labrenzia alexandrii DFL-11] Length = 227 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/204 (59%), Positives = 162/204 (79%), Gaps = 1/204 (0%) Query: 43 IDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGM 102 +DLSQTVP+L +AL+ +SDTVA GGR+L V TK QA D V +A+ SAQY VN++WLGGM Sbjct: 1 MDLSQTVPLLHQALKAVSDTVAGGGRVLLVGTKRQAQDAVATSARNSAQYFVNARWLGGM 60 Query: 103 MTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDL 161 +TNWKT+SQSIQ+LR LEE LN + TKKERL ++R+R+KL+R L GI+DMGG+PDL Sbjct: 61 LTNWKTISQSIQRLRKLEETLNSDAANALTKKERLFMDREREKLERNLGGIKDMGGIPDL 120 Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +FV+DTNRE +AIQEARRL IP+ A++D+NS+P+ + Y +PGNDD+ R+++L+CDL+A A Sbjct: 121 IFVIDTNREAIAIQEARRLGIPVAAILDSNSSPEGITYPVPGNDDAGRALSLYCDLIARA 180 Query: 222 AIDGIARQHSYMGADTKSAGETVV 245 AIDGI+R G D ++ E V Sbjct: 181 AIDGISRAQGASGMDVGASEEAPV 204 >gi|255003257|ref|ZP_05278221.1| 30S ribosomal protein S2 [Anaplasma marginale str. Puerto Rico] gi|255004385|ref|ZP_05279186.1| 30S ribosomal protein S2 [Anaplasma marginale str. Virginia] Length = 328 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 124/250 (49%), Positives = 172/250 (68%), Gaps = 2/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 5 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 64 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 65 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 124 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 125 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 184 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 185 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 244 Query: 241 GETVVHSKEG 250 G V S G Sbjct: 245 GSDVAESYAG 254 >gi|42520395|ref|NP_966310.1| 30S ribosomal protein S2 [Wolbachia endosymbiont of Drosophila melanogaster] gi|61215631|sp|Q73HM1|RS2_WOLPM RecName: Full=30S ribosomal protein S2 gi|42410133|gb|AAS14244.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 282 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 163/226 (72%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ T+R L ESGV FGH+ WN KM YI+ + N HIIDL +T+P+LQ A++ + Sbjct: 4 LPKVTVRDLAESGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQVAMKALY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVAFQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPIVA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI Sbjct: 184 GIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGI 229 >gi|161544987|ref|YP_153979.2| 30S ribosomal protein S2 [Anaplasma marginale str. St. Maries] gi|209573722|sp|Q5PAF6|RS2_ANAMM RecName: Full=30S ribosomal protein S2 Length = 327 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 124/250 (49%), Positives = 172/250 (68%), Gaps = 2/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 4 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 64 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 124 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 184 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 243 Query: 241 GETVVHSKEG 250 G V S G Sbjct: 244 GSDVAESYAG 253 >gi|225630157|ref|YP_002726948.1| ribosomal protein S2 [Wolbachia sp. wRi] gi|254764500|sp|C0R2L5|RS2_WOLWR RecName: Full=30S ribosomal protein S2 gi|225592138|gb|ACN95157.1| ribosomal protein S2 [Wolbachia sp. wRi] Length = 282 Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 120/226 (53%), Positives = 164/226 (72%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ T+R L ESGV FGH+ WN K+ YI+ + N HIIDL +T+P+LQ A++V+ Sbjct: 4 LPKVTVRDLAESGVHFGHKISRWNAKIAPYIYGVHQENRIHIIDLRKTLPLLQVAMKVLY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVAFQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPIVA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI Sbjct: 184 GIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGI 229 >gi|126726484|ref|ZP_01742325.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2150] gi|126704347|gb|EBA03439.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2150] Length = 224 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 119/208 (57%), Positives = 161/208 (77%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M ++I+ +RN HI+DL+QTVP+L AL + TVA+GGRILFV TK QA + EAA+R Sbjct: 1 MGQFIYGDRNGIHIMDLTQTVPLLDAALNAVQQTVAKGGRILFVGTKRQAQTPIAEAAER 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNWKTVS SI +L+ L+E L + G TKKERL +ER++ KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWKTVSNSINRLKKLDENLAEGAAGLTKKERLGMEREQSKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIRDMGG+PDL+FV+D N+E LAI EAR+L IP+VA+VDTN++PD +D+ IPGNDD+S Sbjct: 121 LGGIRDMGGVPDLIFVIDVNKEDLAIAEARKLGIPVVAIVDTNASPDDIDFPIPGNDDAS 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGAD 236 R+I L+CDL++ AA+DG++ Q G D Sbjct: 181 RAINLYCDLISRAALDGMSTQMGAAGID 208 >gi|56388137|gb|AAV86724.1| 30S ribosomal protein S2 [Anaplasma marginale str. St. Maries] Length = 365 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 124/250 (49%), Positives = 172/250 (68%), Gaps = 2/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 42 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 101 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 102 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 161 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 162 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 221 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 222 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 281 Query: 241 GETVVHSKEG 250 G V S G Sbjct: 282 GSDVAESYAG 291 >gi|222475272|ref|YP_002563688.1| 30S ribosomal protein S2 (rpsB) [Anaplasma marginale str. Florida] gi|222419409|gb|ACM49432.1| 30S ribosomal protein S2 (rpsB) [Anaplasma marginale str. Florida] Length = 365 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 128/280 (45%), Positives = 181/280 (64%), Gaps = 6/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 42 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 101 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 102 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 161 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 162 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 221 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 222 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 281 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA----VVPEL 276 G V S G + ++ G A +PE+ Sbjct: 282 GSDVAESYAGTAADAGHTPVSETLSAGGPTAGASPYIPEV 321 >gi|75497578|sp|Q5GRH8|RS2_WOLTR RecName: Full=30S ribosomal protein S2 gi|58419381|gb|AAW71396.1| Ribosomal protein S2 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 284 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 127/260 (48%), Positives = 177/260 (68%), Gaps = 13/260 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ T+R L SGV FGH+ WN KM YI+ + N HIIDL +T+P+LQ A++V+ Sbjct: 6 LPEVTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMKVLY 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +GGRILFV TK QA D + A R QY VN +WLGGM+TNW T+S SI+ L E Sbjct: 66 NVAFQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTISSSIKTLVQYE 125 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN EN TKKE NIE+KR KL +AL GIR+MG +PD++F++DTN+E +A++EA +L Sbjct: 126 KVLNAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDTNKEHIAVKEAEKL 185 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG----IARQHSYMGAD 236 IP+VA++DTNS+PD + Y IPGNDDS +SI L+C L A + + G +AR +G D Sbjct: 186 EIPVVAILDTNSDPDGITYPIPGNDDSRKSIELYCRLAADSILAGMESSLARSGVKVG-D 244 Query: 237 TK------SAGETVVHSKEG 250 K G++++ +K+G Sbjct: 245 IKDEEFIQEKGDSIIRTKKG 264 >gi|73667135|ref|YP_303151.1| 30S ribosomal protein S2 [Ehrlichia canis str. Jake] gi|123745847|sp|Q3YRV2|RS2_EHRCJ RecName: Full=30S ribosomal protein S2 gi|72394276|gb|AAZ68553.1| SSU ribosomal protein S2P [Ehrlichia canis str. Jake] Length = 291 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 165/224 (73%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP+FT+R L+ESGV FGH+ WNPKM YI+ N+ HII+L TV +L+ AL+ + D Sbjct: 4 LPKFTMRDLVESGVHFGHKASRWNPKMAPYIYGVYNDIHIINLQNTVVLLKNALKALYDV 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + GR+LF+ TK QAS + + A R QY VN++WLGGM+TNW+T+S SI+KL++ E+L Sbjct: 64 VLKRGRVLFIGTKVQASAIIADEAIRCGQYYVNNRWLGGMLTNWETISLSIKKLKEYEKL 123 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + FTKKE L E+KR KL R++ GI +MGGLP ++FV+DTN+E +AI+EA +L I Sbjct: 124 IENVDNQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHVLFVIDTNKEHIAIKEANKLNI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 P++AV+DTNS+P +DY IPGNDD+ RSI FC +V+ ++ I Sbjct: 184 PVIAVLDTNSDPTGIDYPIPGNDDAVRSIDFFCKIVSDTILEAI 227 >gi|161899039|ref|YP_198638.2| 30S ribosomal protein S2 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 279 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 126/260 (48%), Positives = 177/260 (68%), Gaps = 13/260 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 +P+ T+R L SGV FGH+ WN KM YI+ + N HIIDL +T+P+LQ A++V+ Sbjct: 1 MPEVTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMKVLY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +GGRILFV TK QA D + A R QY VN +WLGGM+TNW T+S SI+ L E Sbjct: 61 NVAFQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTISSSIKTLVQYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN EN TKKE NIE+KR KL +AL GIR+MG +PD++F++DTN+E +A++EA +L Sbjct: 121 KVLNAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDTNKEHIAVKEAEKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG----IARQHSYMGAD 236 IP+VA++DTNS+PD + Y IPGNDDS +SI L+C L A + + G +AR +G D Sbjct: 181 EIPVVAILDTNSDPDGITYPIPGNDDSRKSIELYCRLAADSILAGMESSLARSGVKVG-D 239 Query: 237 TK------SAGETVVHSKEG 250 K G++++ +K+G Sbjct: 240 IKDEEFIQEKGDSIIRTKKG 259 >gi|254486229|ref|ZP_05099434.1| ribosomal protein S2 [Roseobacter sp. GAI101] gi|214043098|gb|EEB83736.1| ribosomal protein S2 [Roseobacter sp. GAI101] Length = 261 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 118/208 (56%), Positives = 160/208 (76%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI+ RN HI+DL+QTVPML +ALQVI DTVA+GG ILFV TK QA+ + +AA++ Sbjct: 1 MGPYIYGARNGIHIMDLTQTVPMLDQALQVIRDTVAKGGSILFVGTKRQAAQPIADAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E + G TKKERL +ER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKSIDEQSERGFAGLTKKERLGMERDQFKLEAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG PDL+FV+D +E LA+ EA +L IP+VAVVDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGRPDLIFVIDVKKEALAVAEANKLGIPVVAVVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGAD 236 R+I+L+CDL A AA+DG++ Q G D Sbjct: 181 RAISLYCDLAARAALDGMSAQLGAAGVD 208 >gi|68171644|ref|ZP_00545009.1| Ribosomal protein S2, bacterial and organelle form [Ehrlichia chaffeensis str. Sapulpa] gi|88657981|ref|YP_507329.1| 30S ribosomal protein S2 [Ehrlichia chaffeensis str. Arkansas] gi|123750068|sp|Q2GGV4|RS2_EHRCR RecName: Full=30S ribosomal protein S2 gi|67998937|gb|EAM85623.1| Ribosomal protein S2, bacterial and organelle form [Ehrlichia chaffeensis str. Sapulpa] gi|88599438|gb|ABD44907.1| ribosomal protein S2 [Ehrlichia chaffeensis str. Arkansas] Length = 288 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 119/249 (47%), Positives = 172/249 (69%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP+FT+R L+ESGV FGH+ WNPKM YI+ N+ HII+L TV +L+ AL+ + D Sbjct: 4 LPKFTMRDLVESGVHFGHKASRWNPKMAPYIYGVHNDIHIINLQNTVVLLKNALKALYDI 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + GR+LF+ TK QAS + + A R QY +N++WLGGM+TNW+T+S SI+KL++ E+L Sbjct: 64 VLKRGRVLFIGTKVQASAIIADEAVRCGQYYINNRWLGGMLTNWETISLSIKKLKEYEKL 123 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + FTKKE L E+KR KL R++ GI +MGGLP +FV+DTN+E +AI+EA +L I Sbjct: 124 IENVDNQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHALFVIDTNKEHIAIKEANKLNI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++AV+DTNS+P +DY IPGNDD+ RSI FC +V+ ++ I + G + + Sbjct: 184 PVIAVLDTNSDPAGIDYPIPGNDDAVRSIDFFCKIVSDTILEAIRSDLAKSGINVDGIKD 243 Query: 243 TVVHSKEGM 251 V +E + Sbjct: 244 FSVEKREDL 252 >gi|254477428|ref|ZP_05090814.1| ribosomal protein S2 [Ruegeria sp. R11] gi|214031671|gb|EEB72506.1| ribosomal protein S2 [Ruegeria sp. R11] Length = 227 Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 121/208 (58%), Positives = 163/208 (78%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVPML +AL + DTVA+GGR+LFV TK QA+ + EAA++ Sbjct: 1 MAPFIYGARNGIHIMDLTQTVPMLDQALTAVRDTVAKGGRVLFVGTKRQAAAPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 SAQY +N +WLGG +TNWKTVSQSIQ+L+D++E + +G TKKERL +ER ++KL+ + Sbjct: 61 SAQYFMNHRWLGGTLTNWKTVSQSIQRLKDIDERMASGAEGLTKKERLGMERDQEKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GI +MGG+PDL+FV+D +E LAI EA +L IP+VAVVDTN +P+ VDY+IPGNDD++ Sbjct: 121 LGGISEMGGVPDLLFVIDVKKEALAIAEANKLGIPVVAVVDTNCSPEGVDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGAD 236 R+IAL+CDLVA AA+DG+ Q G D Sbjct: 181 RAIALYCDLVARAALDGMTAQLGAAGVD 208 >gi|83953649|ref|ZP_00962370.1| 30S ribosomal protein S2 [Sulfitobacter sp. NAS-14.1] gi|83841594|gb|EAP80763.1| 30S ribosomal protein S2 [Sulfitobacter sp. NAS-14.1] Length = 261 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 116/208 (55%), Positives = 159/208 (76%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVPML +ALQVI DTVA+GG ILFV TK QA+ + EAA++ Sbjct: 1 MGPFIYGARNGIHIMDLTQTVPMLDQALQVIRDTVAKGGSILFVGTKRQAAQPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E + G TKKERL +ER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKSIDEQSERGFSGLTKKERLGMERDQAKLEAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG PDL+FV+D +E LA+ EA +L IP++AVVDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGRPDLIFVIDVKKEALAVAEANKLGIPVIAVVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGAD 236 R+I ++CDL A AA+DG++ Q G D Sbjct: 181 RAIHMYCDLAARAALDGMSAQLGAAGVD 208 >gi|85703127|ref|ZP_01034231.1| 30S ribosomal protein S2 [Roseovarius sp. 217] gi|85672055|gb|EAQ26912.1| 30S ribosomal protein S2 [Roseovarius sp. 217] Length = 229 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 113/208 (54%), Positives = 160/208 (76%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVP+L AL I +TVA+ GRILFV TK QA+ + EAA++ Sbjct: 1 MGEFIYGARNGIHIMDLTQTVPLLDAALHAIRETVAKNGRILFVGTKRQAAQPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E++ +G TKKERL IER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKQIDEMMEVGAEGLTKKERLGIERDQIKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG+PD++FV+D +E LA+ EA +L IP+V +VDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGVPDMLFVIDVKKEALAVAEANKLGIPVVGIVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGAD 236 R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 181 RAIALYCDLVSRAALDGMSAQLGAAGVD 208 >gi|58698904|ref|ZP_00373769.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534585|gb|EAL58719.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila ananassae] Length = 276 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 118/222 (53%), Positives = 161/222 (72%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R L ESGV FGH+ WN K+ YI+ + N HIIDL +T+P+LQ A++V+ D Sbjct: 2 TVRDLAESGVHFGHKISRWNAKIAPYIYGVHQENRIHIIDLRKTLPLLQVAMKVLYDVAF 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E++LN Sbjct: 62 QGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYEKILN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L IPI Sbjct: 122 DEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKLGIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI Sbjct: 182 VAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGI 223 >gi|269958681|ref|YP_003328468.1| 30S ribosomal protein S2 [Anaplasma centrale str. Israel] gi|269848510|gb|ACZ49154.1| 30S ribosomal protein S2 [Anaplasma centrale str. Israel] Length = 340 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 130/280 (46%), Positives = 185/280 (66%), Gaps = 10/280 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 25 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 84 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ + E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 85 DVVLKRGRVLFVGTKVQASNMIAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 144 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L++ FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 145 KLISNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 204 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--- 237 RIP+VAV+DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + Sbjct: 205 RIPVVAVLDTNSDPSGVDYPIPGNDDSVRSIDFFCRAVSKTILEAIRSDLAGSGVNVAAA 264 Query: 238 --KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 +AGE V G D S++ + G+ +VP+ Sbjct: 265 RAAAAGEGDVAEPNGGAAAADRPSADEMLGAGE---IVPD 301 >gi|149202589|ref|ZP_01879561.1| 30S ribosomal protein S2 [Roseovarius sp. TM1035] gi|149143871|gb|EDM31905.1| 30S ribosomal protein S2 [Roseovarius sp. TM1035] Length = 226 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 112/208 (53%), Positives = 159/208 (76%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVP+L AL I +TVA+ GRILFV TK QA+ + EAA++ Sbjct: 1 MGEFIYGARNGIHIMDLTQTVPLLDAALHAIRETVAKNGRILFVGTKRQAAQPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E++ +G TKKERL IER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKQIDEMMEHGAEGLTKKERLGIERDQIKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG+PD++FV+D +E LA+ EA +L IP+V +VDTN +P +DY+IPGNDD++ Sbjct: 121 LGGIREMGGVPDMLFVIDVKKEALAVAEANKLGIPVVGIVDTNCSPAGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGAD 236 R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 181 RAIALYCDLVSRAALDGMSAQLGAAGVD 208 >gi|269795655|ref|YP_003315110.1| 30S ribosomal protein S2P [Sanguibacter keddieii DSM 10542] gi|269097840|gb|ACZ22276.1| SSU ribosomal protein S2P [Sanguibacter keddieii DSM 10542] Length = 317 Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 118/227 (51%), Positives = 167/227 (73%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A + + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TV++ +Q+L++LE++ + Sbjct: 65 GSILFVGTKKQAQEPVAEQAARVGMPYVNHRWLGGMLTNFQTVNKRLQRLKELEQIDFDD 124 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G FTKKE L + R+RDKL R L GIRDM +P +++VDTN+E LA+ EAR+LRIPI Sbjct: 125 VAGSAFTKKELLIMRRERDKLARTLGGIRDMAKIPSAVWIVDTNKEHLAVDEARKLRIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN +PD+VDY IPGNDD+ R++AL ++A A +G+ +H+ Sbjct: 185 VAILDTNCDPDVVDYKIPGNDDAIRAVALLTRVIADAVAEGLIARHA 231 >gi|71282500|ref|YP_268295.1| 30S ribosomal protein S2 [Colwellia psychrerythraea 34H] gi|123733781|sp|Q485H0|RS2_COLP3 RecName: Full=30S ribosomal protein S2 gi|71148240|gb|AAZ28713.1| ribosomal protein S2 [Colwellia psychrerythraea 34H] Length = 242 Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 167/224 (74%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+++IF R+ HII+L QTVPM +AL +++ Sbjct: 1 MSNVSMRDMLKAGVHFGHKTRYWNPKMKQFIFGARDKVHIINLEQTVPMFNEALAFVNNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++ G++LFV TK ASD + +AA +S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSKKGKVLFVGTKRAASDAIKDAAIKSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL ++L GI++MGGLPD++F++D + E +AI+EA L Sbjct: 121 STDGTFEALTKKEALMRTREMEKLDKSLGGIKNMGGLPDVLFIIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+++VVDTNSNPD VDYV+PGNDD+ R++ L+CD VA++ + G Sbjct: 181 IPVISVVDTNSNPDGVDYVVPGNDDAIRAVTLYCDAVANSVLSG 224 >gi|159036874|ref|YP_001536127.1| ribosomal protein S2 [Salinispora arenicola CNS-205] gi|189045000|sp|A8M6B1|RS2_SALAI RecName: Full=30S ribosomal protein S2 gi|157915709|gb|ABV97136.1| ribosomal protein S2 [Salinispora arenicola CNS-205] Length = 279 Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 134/277 (48%), Positives = 180/277 (64%), Gaps = 10/277 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYDFVRGTVAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L L+ Sbjct: 65 GSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEALGDLS 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L + R+++KL R L G+RDM LP ++VVDT +E +A+ EAR+L IP+ Sbjct: 125 GTAAGYTKKETLQLSREKEKLSRTLGGLRDMQKLPAAIWVVDTKKEHIAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 +AV+DTN +PD VDY IPGNDD+ RS L +VA+A DG IAR G D K E Sbjct: 185 IAVLDTNCDPDEVDYPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRRRGTDEKP--EA 242 Query: 244 VVHSKEGM-----QLEEDSQSSESSVLDGQEVAVVPE 275 V S E + +L E+ + S+ D Q A E Sbjct: 243 GVASDEPLAEWERELLEEPKKSDEPKSDEQPAAAAAE 279 >gi|262277279|ref|ZP_06055072.1| ribosomal protein S2 [alpha proteobacterium HIMB114] gi|262224382|gb|EEY74841.1| ribosomal protein S2 [alpha proteobacterium HIMB114] Length = 281 Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 115/225 (51%), Positives = 172/225 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LP+ T++ LLE+GV GH+ F WNPKM+ YIF E+N+ HIIDLS+T+ +L+ AL + Sbjct: 20 MNLPEVTVKDLLEAGVHLGHKTFRWNPKMKPYIFGEKNSIHIIDLSKTLELLKTALLELH 79 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +V+ GG++LFV+TK QAS+ + E AK + Y VN +WLGGM+TNW T++ SI++L++L+ Sbjct: 80 KSVSSGGKVLFVSTKKQASELIAEVAKETDNYYVNFRWLGGMLTNWNTITNSIKRLKELK 139 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L KE+ GFTKKE + + +++KL+R+L GI +M +PD++FV+DTN E LA+ EA++L Sbjct: 140 KNLLKEDSGFTKKELIKMNLEKEKLERSLGGISEMKKIPDIIFVIDTNIESLAVLEAKKL 199 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI+ V+D+NS+PD +D+ IPGNDD+ RSI L+CDL+ +D Sbjct: 200 NIPIIGVLDSNSDPDNIDFPIPGNDDARRSINLYCDLIKKTILDA 244 >gi|190571619|ref|YP_001975977.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|238058204|sp|B3CNG9|RS2_WOLPP RecName: Full=30S ribosomal protein S2 gi|190357891|emb|CAQ55351.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 271 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 161/226 (71%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ TIR L ESGV FGH+ WN KM YI+ ++N HIIDL +T+P+L+ A++ + Sbjct: 4 LPKVTIRDLAESGVHFGHKVSRWNAKMAPYIYGVHQQNRIHIIDLRKTLPLLEAAMKALY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D ++ GRILFV TK QA D V A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVASQDGRILFVGTKFQALDIVASEAVRCGQYYVNDRWLGGMLTNWNTVSSSIKTLIQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+KR KL + L GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKRKKLDKELGGIREMGAVPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V V+DTNS+PD + Y I GNDDS +SI L+C L A + + GI Sbjct: 184 GIPVVGVLDTNSDPDDIAYPISGNDDSRKSIELYCKLAADSILAGI 229 >gi|213019021|ref|ZP_03334828.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995130|gb|EEB55771.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 281 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/226 (52%), Positives = 161/226 (71%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ TIR L ESGV FGH+ WN KM YI+ ++N HIIDL +T+P+L+ A++ + Sbjct: 14 LPKVTIRDLAESGVHFGHKVSRWNAKMAPYIYGVHQQNRIHIIDLRKTLPLLEAAMKALY 73 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D ++ GRILFV TK QA D V A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 74 DVASQDGRILFVGTKFQALDIVASEAVRCGQYYVNDRWLGGMLTNWNTVSSSIKTLIQYE 133 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+KR KL + L GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 134 KILNDEDSILTKKELGNIEKKRKKLDKELGGIREMGAVPDILFIIDTNKEHIAVKEAKKL 193 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V V+DTNS+PD + Y I GNDDS +SI L+C L A + + GI Sbjct: 194 GIPVVGVLDTNSDPDDIAYPISGNDDSRKSIELYCKLAADSILAGI 239 >gi|315127165|ref|YP_004069168.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas sp. SM9913] gi|315015679|gb|ADT69017.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas sp. SM9913] Length = 242 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 117/224 (52%), Positives = 163/224 (72%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSGA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A G++LFV TK AS+ V EAA +S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 AANKGKVLFVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ DKL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMLTREMDKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTNSNPD VDY++PGNDD+ R+I L+ VA+A +G Sbjct: 181 IPVVAIVDTNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEG 224 >gi|269955980|ref|YP_003325769.1| 30S ribosomal protein S2 [Xylanimonas cellulosilytica DSM 15894] gi|269304661|gb|ACZ30211.1| ribosomal protein S2 [Xylanimonas cellulosilytica DSM 15894] Length = 317 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 118/238 (49%), Positives = 165/238 (69%), Gaps = 2/238 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + A + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLTYIDNAYNFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL--N 124 G +LFV TK QA + V E A R VN +WLGGM+TN+ TV + +Q+L++LEE+ + Sbjct: 65 GSVLFVGTKKQAQEPVAEQAARVGMPYVNHRWLGGMLTNFTTVHKRLQRLKELEEINFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL R L GIRDM +P +++VDTN+E LA+ EAR+L IP+ Sbjct: 125 VAGSGLTKKELLVLRREKDKLSRTLGGIRDMAKVPSAVWIVDTNKEHLAVDEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 VA++DTN +PD+VDY IPGNDD+ RS+ L ++A A +G+ ++HS A T+ E Sbjct: 185 VAILDTNCDPDMVDYAIPGNDDAIRSVTLLTRVIADAVAEGLLQRHSGKAAATEGESE 242 >gi|332994204|gb|AEF04259.1| ribosomal protein S2 [Alteromonas sp. SN2] Length = 243 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 118/227 (51%), Positives = 160/227 (70%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ YIF RN HII+L +TVP+ AL +S Sbjct: 1 MANVSMRDMLKAGVHFGHQTRYWNPKMKPYIFGARNKVHIINLEKTVPLFNNALNYLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK A D V +AA + Q+ VN +WLGGM+TNWKTV QSI++L++LE+ Sbjct: 61 ASKKGKILFVGTKRAAGDAVKDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQ- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 K G TKKE L ++R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI EAR Sbjct: 120 --KSQDGTFEKLTKKEALMLQREMEKLENSLGGIKDMGGLPDAIFVVDADHEHIAITEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V VVDTNSNPD VDY+IPGNDD+ R++ L+ D A+A I G Sbjct: 178 NLGIPVVGVVDTNSNPDGVDYIIPGNDDAIRAVQLYLDAAANAVISG 224 >gi|297626640|ref|YP_003688403.1| 30S ribosomal protein S2 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922405|emb|CBL56977.1| 30S ribosomal protein S2 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 325 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 124/265 (46%), Positives = 178/265 (67%), Gaps = 3/265 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + DTVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFNERNGIYIIDLRQSLTYIDKAYAFVKDTVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE--ELLN 124 G++LFV TK QA + V+E A R V+ +WLGGM+TN++T+S+ I +L++LE +L Sbjct: 65 GQVLFVGTKKQAQEAVVEQASRVGMPYVDQRWLGGMLTNFQTISKRIARLKELEAMDLET 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + GFTKKE L R++ KL+++L GIRDM +P ++++DTN+E LA+ EAR+L IP+ Sbjct: 125 VQPGGFTKKELLGFSREKTKLEKSLGGIRDMAKVPQAVWIIDTNKEHLAVDEARKLHIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VDY IPGNDD+ RS+AL ++A A +G +ARQ T+ A Sbjct: 185 VAILDTNCDPDEVDYPIPGNDDAIRSVALLTRIIADACAEGLVARQAKNQADGTEGAAAE 244 Query: 244 VVHSKEGMQLEEDSQSSESSVLDGQ 268 + E LE ++ ++ D Q Sbjct: 245 PMAEWEKELLESGEKAEKTEQTDEQ 269 >gi|145593873|ref|YP_001158170.1| ribosomal protein S2 [Salinispora tropica CNB-440] gi|189044998|sp|A4X4J2|RS2_SALTO RecName: Full=30S ribosomal protein S2 gi|145303210|gb|ABP53792.1| SSU ribosomal protein S2P [Salinispora tropica CNB-440] Length = 295 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 131/264 (49%), Positives = 175/264 (66%), Gaps = 11/264 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRGTVAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L L+ Sbjct: 65 GSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEALGDLS 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L + R++ KL R L G+RDM LP ++VVDT +E +A+ EAR+L IP+ Sbjct: 125 GTAAGYTKKETLQLNREKGKLSRTLGGLRDMQKLPAAIWVVDTKKEHIAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 +AV+DTN +PD VDY IPGNDD+ RS L +VA+A DG IAR G D K E Sbjct: 185 IAVLDTNCDPDEVDYPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRRRGTDEKP--EA 242 Query: 244 VVHSKEGMQ------LEEDSQSSE 261 V + E + LEE +S E Sbjct: 243 GVATDEPLAEWERELLEEPKKSDE 266 >gi|77360960|ref|YP_340535.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas haloplanktis TAC125] gi|123588801|sp|Q3IIX4|RS2_PSEHT RecName: Full=30S ribosomal protein S2 gi|76875871|emb|CAI87092.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas haloplanktis TAC125] Length = 242 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 115/226 (50%), Positives = 165/226 (73%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNTALKFLSGA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G++LFV TK AS+ V E+A S QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AANKGKVLFVGTKRAASEAVKESAIASDQYYVNHRWLGGMLTNWKTVRQSIKRLKDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + ++ F TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA Sbjct: 119 IQSQDGTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANN 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+VA+VDTNSNPD VD+++PGNDD+ R+++L+ + VA+A +G Sbjct: 179 LGIPVVAIVDTNSNPDGVDFIVPGNDDAIRAVSLYTNAVATAITEG 224 >gi|119471167|ref|ZP_01613699.1| 30S ribosomal subunit protein S2 [Alteromonadales bacterium TW-7] gi|119445823|gb|EAW27105.1| 30S ribosomal subunit protein S2 [Alteromonadales bacterium TW-7] Length = 242 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNNALKFLSGA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A G++LFV TK ASD V EAA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 AANKGKVLFVGTKRAASDAVKEAAIASDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTNSNPD VD+++PGNDD+ R++ L+ VA+A +G Sbjct: 181 IPVVAIVDTNSNPDGVDFIVPGNDDAIRAVTLYTSAVAAAITEG 224 >gi|88608048|ref|YP_506812.1| ribosomal protein S2 [Neorickettsia sennetsu str. Miyayama] gi|123722735|sp|Q2GCI4|RS2_NEOSM RecName: Full=30S ribosomal protein S2 gi|88600217|gb|ABD45685.1| ribosomal protein S2 [Neorickettsia sennetsu str. Miyayama] Length = 298 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 123/268 (45%), Positives = 172/268 (64%), Gaps = 18/268 (6%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + T++ L E G GH+ WNPKM YI+ N THI+DL +TVPML+ AL ISD Sbjct: 7 RVTVKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALNAISDVA 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A GR+LFV TK QA D + E A R QY VN +W GM TNW TVS+S++KL E+LL Sbjct: 67 ANSGRVLFVGTKMQACDIIKEEATRCGQYYVNLRWPSGMFTNWNTVSKSVKKLVHYEKLL 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E +KKERL+I RKR+++++ L G+R MGGLP+++FV+D +E +A++EA +L IP Sbjct: 127 EQEGDVLSKKERLSINRKRERIEKYLGGVRKMGGLPNIIFVIDPKKEHIAVEEAWKLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VAVVDTN +P + Y IPGNDDS R I +C LVA A + GI E+ Sbjct: 187 VVAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLVADAVLVGI---------------ES 231 Query: 244 VVHSKEGMQLEE--DSQSSESSVLDGQE 269 + K+ +L++ D ++++ S DGQ+ Sbjct: 232 ELQRKQSKELDDKADEKAAKVSHSDGQK 259 >gi|88857977|ref|ZP_01132619.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas tunicata D2] gi|88819594|gb|EAR29407.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas tunicata D2] Length = 242 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 115/226 (50%), Positives = 163/226 (72%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL + + Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEHTVPMFNEALSFLRNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK AS+ V EAA+RS QY VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASNKGKILFVGTKRAASEAVKEAAQRSDQYYVNHRWLGGMLTNWKTVRQSIKRLKELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + ++ F TKKE L + R+ DKL+++L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 119 IQSQDGTFEKLTKKEALMLSREMDKLEKSLGGIKDMGGLPDALFVIDADHEHIAIREANN 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V++VDTNSNPD VD+++PGNDD+ R++ L+ VA I+G Sbjct: 179 LGIPVVSIVDTNSNPDGVDFIVPGNDDAIRAVQLYTGAVAQNIIEG 224 >gi|169630278|ref|YP_001703927.1| 30s ribosomal protein S2 [Mycobacterium abscessus ATCC 19977] gi|238688779|sp|B1MDF2|RS2_MYCA9 RecName: Full=30S ribosomal protein S2 gi|169242245|emb|CAM63273.1| 30s ribosomal protein S2 [Mycobacterium abscessus] Length = 277 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 120/242 (49%), Positives = 170/242 (70%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GSVMFVGTKKQAQEPIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P +FVVDTN+E LA+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SAGE 242 I+A++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ + G D K AGE Sbjct: 183 IIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLAGGDEKPEAGE 242 Query: 243 TV 244 + Sbjct: 243 PL 244 >gi|254492638|ref|ZP_05105809.1| ribosomal protein S2 [Methylophaga thiooxidans DMS010] gi|224462159|gb|EEF78437.1| ribosomal protein S2 [Methylophaga thiooxydans DMS010] Length = 245 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 113/221 (51%), Positives = 164/221 (74%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM ++IF +RNN HII+L Q++P+ AL +S ++ G Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMGQFIFGKRNNIHIINLEQSLPLFNDALNFVSKLASQKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 RILFV TK A D + E A+R+ VN +WLGGM+TN++TV QSI++L ++E++ + + Sbjct: 61 RILFVGTKRAAQDAIREDAERAGMPYVNRRWLGGMLTNYQTVRQSIKRLDAIQEMMESGK 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G KKE L++ R++DKL++++ GIR MGGLPD MFV+D E +A++EAR+L IP++A Sbjct: 121 TEGLKKKEILDLTREQDKLEKSIGGIRKMGGLPDAMFVIDVEHESIAVKEARKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+NS+PD VDYVIPGNDDS R+I L+ A A ++G A Sbjct: 181 VVDSNSDPDGVDYVIPGNDDSMRAIRLYTANFADAILEGRA 221 >gi|332307505|ref|YP_004435356.1| ribosomal protein S2 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174834|gb|AEE24088.1| ribosomal protein S2 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 243 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 117/226 (51%), Positives = 162/226 (71%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL IS Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK ASD V EAA + Q+ VN +WLGGM+TNWKTV QSI++L+DLE+ Sbjct: 61 ASKKGKILFVGTKRAASDSVREAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQ- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ F TKKE L ++R+ KL+ +L GI++MGGLPD +FVVD + E +AI EAR Sbjct: 120 -QSQDGTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARN 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V++VDTNSNPD VDY+IPGNDD+ R++ L+ + A A I+G Sbjct: 179 LGIPVVSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEG 224 >gi|332670028|ref|YP_004453036.1| 30S ribosomal protein S2 [Cellulomonas fimi ATCC 484] gi|332339066|gb|AEE45649.1| ribosomal protein S2 [Cellulomonas fimi ATCC 484] Length = 322 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 116/227 (51%), Positives = 163/227 (71%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A +S TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYDFVSQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + V E A R VN +WLGGM+TN+ TV + +Q+L++LE++ + Sbjct: 65 GSILFVGTKKQAQEPVAEQAARVGMPYVNQRWLGGMLTNFTTVHKRLQRLKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL + L GIRDM +P +++VDTN+E LA+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLRREKDKLSKTLGGIRDMAKVPSAVWIVDTNKEHLAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN +PD+VDY IPGNDD+ R++ L ++A AA DG+ ++HS Sbjct: 185 VAILDTNCDPDVVDYPIPGNDDAIRAVQLLTRVIADAAADGLLKRHS 231 >gi|237808856|ref|YP_002893296.1| 30S ribosomal protein S2 [Tolumonas auensis DSM 9187] gi|259495227|sp|C4L864|RS2_TOLAT RecName: Full=30S ribosomal protein S2 gi|237501117|gb|ACQ93710.1| ribosomal protein S2 [Tolumonas auensis DSM 9187] Length = 242 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 161/220 (73%), Gaps = 1/220 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNPKM+ +IF RNN HII+L +TVPM AL +S Sbjct: 1 MAKVSMRDMLQAGVHFGHQTRFWNPKMKPFIFGARNNVHIINLEKTVPMFDDALNYLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++ G+ILFV TK A++ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASKKGKILFVGTKRAATEAVKEAAANCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L+ + TKKE L R+ +KL+++L GI+DMGGLPD++FV+D + E +AI+EA L Sbjct: 121 SLDGTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP+V++VDTNSNPD VDY+IPGNDD+ R++ L+ + A + Sbjct: 181 IPVVSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAADS 220 >gi|72161080|ref|YP_288737.1| 30S ribosomal protein S2 [Thermobifida fusca YX] gi|123774765|sp|Q47S53|RS2_THEFY RecName: Full=30S ribosomal protein S2 gi|71914812|gb|AAZ54714.1| SSU ribosomal protein S2P [Thermobifida fusca YX] Length = 292 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 117/240 (48%), Positives = 167/240 (69%), Gaps = 2/240 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + + +TVA G Sbjct: 6 TIRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLSYIDRAYEFVKETVAHG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + +Q+L++LEE+ + Sbjct: 66 GTILFVGTKKQAQEAIYEQARRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEEIDFDD 125 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R+++KL+R L GIRDM +P +++VDT +E +AI EAR+L IP+ Sbjct: 126 VASSGLTKKELLGLRREKEKLERTLGGIRDMNRVPSAVWIVDTKKEHIAISEARKLNIPV 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA++DTN +PD VDY IPGNDD+ RS++L +VA A +G+ + K AGE + Sbjct: 186 VAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVVADAVAEGLMIRSGGAPGSEKGAGEPL 245 >gi|313836790|gb|EFS74504.1| ribosomal protein S2 [Propionibacterium acnes HL037PA2] gi|314929802|gb|EFS93633.1| ribosomal protein S2 [Propionibacterium acnes HL044PA1] gi|314972231|gb|EFT16328.1| ribosomal protein S2 [Propionibacterium acnes HL037PA3] gi|328907658|gb|EGG27422.1| 30S ribosomal protein S2 [Propionibacterium sp. P08] Length = 283 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 121/237 (51%), Positives = 167/237 (70%), Gaps = 3/237 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYTFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + + E A R VN +WLGGM+TN++T+S+ I +L++LE + L+K Sbjct: 65 GQILFVGTKKQAQESIAEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDLDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P +++VDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWIVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSA 240 VA++DTN +PD VDY IPGNDD+ RS++L +VA A +G+ AR G T A Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIVADAVAEGLMARSAGKSGEQTAEA 241 >gi|50842999|ref|YP_056226.1| 30S ribosomal protein S2 [Propionibacterium acnes KPA171202] gi|289426391|ref|ZP_06428134.1| ribosomal protein S2 [Propionibacterium acnes SK187] gi|289428673|ref|ZP_06430356.1| ribosomal protein S2 [Propionibacterium acnes J165] gi|295131070|ref|YP_003581733.1| ribosomal protein S2 [Propionibacterium acnes SK137] gi|61215509|sp|Q6A7J7|RS2_PROAC RecName: Full=30S ribosomal protein S2 gi|50840601|gb|AAT83268.1| 30S ribosomal protein S2 [Propionibacterium acnes KPA171202] gi|289153119|gb|EFD01837.1| ribosomal protein S2 [Propionibacterium acnes SK187] gi|289158071|gb|EFD06291.1| ribosomal protein S2 [Propionibacterium acnes J165] gi|291375319|gb|ADD99173.1| ribosomal protein S2 [Propionibacterium acnes SK137] gi|313773502|gb|EFS39468.1| ribosomal protein S2 [Propionibacterium acnes HL074PA1] gi|313793956|gb|EFS41980.1| ribosomal protein S2 [Propionibacterium acnes HL110PA1] gi|313801343|gb|EFS42594.1| ribosomal protein S2 [Propionibacterium acnes HL110PA2] gi|313807977|gb|EFS46458.1| ribosomal protein S2 [Propionibacterium acnes HL087PA2] gi|313811554|gb|EFS49268.1| ribosomal protein S2 [Propionibacterium acnes HL083PA1] gi|313819546|gb|EFS57260.1| ribosomal protein S2 [Propionibacterium acnes HL046PA2] gi|313822131|gb|EFS59845.1| ribosomal protein S2 [Propionibacterium acnes HL036PA1] gi|313823635|gb|EFS61349.1| ribosomal protein S2 [Propionibacterium acnes HL036PA2] gi|313825959|gb|EFS63673.1| ribosomal protein S2 [Propionibacterium acnes HL063PA1] gi|313831294|gb|EFS69008.1| ribosomal protein S2 [Propionibacterium acnes HL007PA1] gi|313834905|gb|EFS72619.1| ribosomal protein S2 [Propionibacterium acnes HL056PA1] gi|314924716|gb|EFS88547.1| ribosomal protein S2 [Propionibacterium acnes HL036PA3] gi|314962113|gb|EFT06214.1| ribosomal protein S2 [Propionibacterium acnes HL002PA2] gi|314963692|gb|EFT07792.1| ribosomal protein S2 [Propionibacterium acnes HL082PA1] gi|314974170|gb|EFT18266.1| ribosomal protein S2 [Propionibacterium acnes HL053PA1] gi|314976540|gb|EFT20635.1| ribosomal protein S2 [Propionibacterium acnes HL045PA1] gi|314979005|gb|EFT23099.1| ribosomal protein S2 [Propionibacterium acnes HL072PA2] gi|314984359|gb|EFT28451.1| ribosomal protein S2 [Propionibacterium acnes HL005PA1] gi|314986549|gb|EFT30641.1| ribosomal protein S2 [Propionibacterium acnes HL005PA2] gi|314990908|gb|EFT34999.1| ribosomal protein S2 [Propionibacterium acnes HL005PA3] gi|315079542|gb|EFT51535.1| ribosomal protein S2 [Propionibacterium acnes HL053PA2] gi|315081230|gb|EFT53206.1| ribosomal protein S2 [Propionibacterium acnes HL078PA1] gi|315087113|gb|EFT59089.1| ribosomal protein S2 [Propionibacterium acnes HL002PA3] gi|315089286|gb|EFT61262.1| ribosomal protein S2 [Propionibacterium acnes HL072PA1] gi|315095309|gb|EFT67285.1| ribosomal protein S2 [Propionibacterium acnes HL038PA1] gi|327328428|gb|EGE70190.1| ribosomal protein S2 [Propionibacterium acnes HL096PA2] gi|327334222|gb|EGE75936.1| ribosomal protein S2 [Propionibacterium acnes HL097PA1] gi|327444215|gb|EGE90869.1| ribosomal protein S2 [Propionibacterium acnes HL043PA2] gi|327444906|gb|EGE91560.1| ribosomal protein S2 [Propionibacterium acnes HL043PA1] gi|327446391|gb|EGE93045.1| ribosomal protein S2 [Propionibacterium acnes HL013PA2] gi|327452021|gb|EGE98675.1| ribosomal protein S2 [Propionibacterium acnes HL092PA1] gi|328752381|gb|EGF65997.1| ribosomal protein S2 [Propionibacterium acnes HL020PA1] gi|328760016|gb|EGF73598.1| ribosomal protein S2 [Propionibacterium acnes HL099PA1] gi|332675949|gb|AEE72765.1| 30S ribosomal protein S2 [Propionibacterium acnes 266] Length = 283 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|315083596|gb|EFT55572.1| ribosomal protein S2 [Propionibacterium acnes HL027PA2] Length = 283 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|282854670|ref|ZP_06264005.1| ribosomal protein S2 [Propionibacterium acnes J139] gi|282582252|gb|EFB87634.1| ribosomal protein S2 [Propionibacterium acnes J139] Length = 287 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|313839936|gb|EFS77650.1| ribosomal protein S2 [Propionibacterium acnes HL086PA1] Length = 283 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|313763563|gb|EFS34927.1| ribosomal protein S2 [Propionibacterium acnes HL013PA1] gi|313816743|gb|EFS54457.1| ribosomal protein S2 [Propionibacterium acnes HL059PA1] gi|314914717|gb|EFS78548.1| ribosomal protein S2 [Propionibacterium acnes HL005PA4] gi|314919321|gb|EFS83152.1| ribosomal protein S2 [Propionibacterium acnes HL050PA1] gi|314920769|gb|EFS84600.1| ribosomal protein S2 [Propionibacterium acnes HL050PA3] gi|314930649|gb|EFS94480.1| ribosomal protein S2 [Propionibacterium acnes HL067PA1] gi|314954395|gb|EFS98801.1| ribosomal protein S2 [Propionibacterium acnes HL027PA1] gi|314968480|gb|EFT12578.1| ribosomal protein S2 [Propionibacterium acnes HL037PA1] gi|315099190|gb|EFT71166.1| ribosomal protein S2 [Propionibacterium acnes HL059PA2] gi|315100327|gb|EFT72303.1| ribosomal protein S2 [Propionibacterium acnes HL046PA1] gi|315108989|gb|EFT80965.1| ribosomal protein S2 [Propionibacterium acnes HL030PA2] gi|327454942|gb|EGF01597.1| ribosomal protein S2 [Propionibacterium acnes HL087PA3] gi|327457772|gb|EGF04427.1| ribosomal protein S2 [Propionibacterium acnes HL083PA2] gi|328755225|gb|EGF68841.1| ribosomal protein S2 [Propionibacterium acnes HL087PA1] gi|328758296|gb|EGF71912.1| ribosomal protein S2 [Propionibacterium acnes HL025PA2] Length = 283 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|315502463|ref|YP_004081350.1| ribosomal protein s2 [Micromonospora sp. L5] gi|315409082|gb|ADU07199.1| ribosomal protein S2 [Micromonospora sp. L5] Length = 288 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 121/235 (51%), Positives = 165/235 (70%), Gaps = 3/235 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRTTVAGG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L L+ Sbjct: 65 GSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEALGDLS 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L + R++ KL + L G+RDM LP +++VDT +E +A+ EAR+L IP+ Sbjct: 125 GTAAGYTKKETLQLSREKIKLTKTLGGLRDMQKLPAAVWIVDTKKEHIAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK 238 +AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG IAR GAD K Sbjct: 185 IAVLDTNCDPDEVDFPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRNRGADEK 239 >gi|302865906|ref|YP_003834543.1| 30S ribosomal protein S2 [Micromonospora aurantiaca ATCC 27029] gi|302568765|gb|ADL44967.1| ribosomal protein S2 [Micromonospora aurantiaca ATCC 27029] Length = 289 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 121/235 (51%), Positives = 165/235 (70%), Gaps = 3/235 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRTTVAGG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L L+ Sbjct: 65 GSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEALGDLS 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L + R++ KL + L G+RDM LP +++VDT +E +A+ EAR+L IP+ Sbjct: 125 GTAAGYTKKETLQLSREKIKLTKTLGGLRDMQKLPAAVWIVDTKKEHIAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK 238 +AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG IAR GAD K Sbjct: 185 IAVLDTNCDPDEVDFPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRNRGADEK 239 >gi|254797267|ref|YP_003082109.1| ribosomal protein S2 [Neorickettsia risticii str. Illinois] gi|254590505|gb|ACT69867.1| ribosomal protein S2 [Neorickettsia risticii str. Illinois] Length = 298 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 122/268 (45%), Positives = 173/268 (64%), Gaps = 18/268 (6%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + T++ L E G GH+ WNPKM YI+ N THI+DL +TVPML+ AL+ ISD Sbjct: 7 RVTVKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALKAISDVA 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A GR+LFV TK QA D + E A R Q+ VN +W GM TNW TVS+S++KL E+LL Sbjct: 67 ANSGRVLFVGTKMQACDIIKEEAMRCGQHYVNLRWPSGMFTNWNTVSKSVKKLVHYEKLL 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E +KKERL+I RKR+++++ L G+R MGGLP ++FV+D +E +A++EA +L IP Sbjct: 127 EQEGDVLSKKERLSINRKRERIEKYLGGVRKMGGLPSIIFVIDPKKEHIAVEEAWKLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VAVVDTN +P + Y IPGNDDS R I +C LVA A + GI E+ Sbjct: 187 VVAVVDTNCDPSKITYSIPGNDDSLRCIEYYCGLVADAVLVGI---------------ES 231 Query: 244 VVHSKEGMQLEE--DSQSSESSVLDGQE 269 + K+ +L++ D +++++S DGQ+ Sbjct: 232 ELQRKQSRELDDKADEKAAKASHSDGQK 259 >gi|327329706|gb|EGE71462.1| ribosomal protein S2 [Propionibacterium acnes HL096PA3] Length = 274 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|238063323|ref|ZP_04608032.1| 30S ribosomal protein S2 [Micromonospora sp. ATCC 39149] gi|237885134|gb|EEP73962.1| 30S ribosomal protein S2 [Micromonospora sp. ATCC 39149] Length = 279 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 122/235 (51%), Positives = 164/235 (69%), Gaps = 3/235 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYDFVRNTVAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L L+ Sbjct: 65 GSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEALGDLS 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L + R++ KL R L G+RDM LP ++VVDT +E +A+ EAR+L IP+ Sbjct: 125 GTAAGYTKKETLQLSREKIKLTRTLGGLRDMQKLPAAIWVVDTKKEHIAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK 238 +AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG IAR G D K Sbjct: 185 IAVLDTNCDPDEVDFPIPGNDDAIRSAELLTRVVAAAVADGLIARSGRRRGGDEK 239 >gi|296129331|ref|YP_003636581.1| ribosomal protein S2 [Cellulomonas flavigena DSM 20109] gi|296021146|gb|ADG74382.1| ribosomal protein S2 [Cellulomonas flavigena DSM 20109] Length = 326 Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 116/227 (51%), Positives = 162/227 (71%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A + +S TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYEFVSQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN+ TV + +Q+L++LE++ + Sbjct: 65 GSILFVGTKKQAQEPVAEQAARVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEQIDFDD 124 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL + L GIRDM +P +++VDTN+E LA+ EAR+L IP+ Sbjct: 125 VAGSALTKKELLVLRREKDKLTKTLGGIRDMVKVPSAVWIVDTNKEHLAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN +PD+VDY IPGNDD+ R++ L ++A A DG R+HS Sbjct: 185 VAILDTNCDPDVVDYPIPGNDDAIRAVQLLTRVIADAVADGTLRRHS 231 >gi|314923768|gb|EFS87599.1| ribosomal protein S2 [Propionibacterium acnes HL001PA1] gi|314966218|gb|EFT10317.1| ribosomal protein S2 [Propionibacterium acnes HL082PA2] gi|314981984|gb|EFT26077.1| ribosomal protein S2 [Propionibacterium acnes HL110PA3] gi|315090895|gb|EFT62871.1| ribosomal protein S2 [Propionibacterium acnes HL110PA4] gi|315095108|gb|EFT67084.1| ribosomal protein S2 [Propionibacterium acnes HL060PA1] gi|315104337|gb|EFT76313.1| ribosomal protein S2 [Propionibacterium acnes HL050PA2] gi|327328114|gb|EGE69883.1| ribosomal protein S2 [Propionibacterium acnes HL103PA1] Length = 296 Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 14 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 74 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 133 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 134 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 193 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 194 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 235 >gi|145300061|ref|YP_001142902.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida A449] gi|166225236|sp|A4SQI2|RS2_AERS4 RecName: Full=30S ribosomal protein S2 gi|142852833|gb|ABO91154.1| ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida A449] Length = 242 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 114/227 (50%), Positives = 163/227 (71%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNPKM+ YIF R+ HII+L +TVPM A+ IS Sbjct: 1 MAKVSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A+ G++LFV TK AS+ V +AA R Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 AAKKGKVLFVGTKRAASEAVKDAAGRCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ DKL+++L GI++MGGLPD++FVVD + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTREMDKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+V++VDTNSNPD VDYVIPGNDD+ R++ L+ + A ++ A+ Sbjct: 181 IPVVSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEARAQ 227 >gi|315106861|gb|EFT78837.1| ribosomal protein S2 [Propionibacterium acnes HL030PA1] Length = 283 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 116/222 (52%), Positives = 162/222 (72%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYTDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|330466304|ref|YP_004404047.1| 30S ribosomal protein S2 [Verrucosispora maris AB-18-032] gi|328809275|gb|AEB43447.1| 30S ribosomal protein S2 [Verrucosispora maris AB-18-032] Length = 289 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 120/235 (51%), Positives = 165/235 (70%), Gaps = 3/235 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRNTVAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L L+ Sbjct: 65 GSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEALGDLS 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L + R++ KL + L G+RDM LP +++VDT +E +A+ EAR+L IP+ Sbjct: 125 GTAAGYTKKETLQLSREKIKLTKTLGGLRDMQKLPAAVWIVDTKKEHIAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK 238 +AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG IAR G D K Sbjct: 185 IAVLDTNCDPDEVDFPIPGNDDAIRSAELLTRVVAAAVADGLIARSGRRRGGDEK 239 >gi|117621095|ref|YP_855714.1| ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|330830755|ref|YP_004393707.1| 30S ribosomal protein S2 [Aeromonas veronii B565] gi|166225235|sp|A0KHG3|RS2_AERHH RecName: Full=30S ribosomal protein S2 gi|117562502|gb|ABK39450.1| ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|328805891|gb|AEB51090.1| 30S ribosomal protein S2 [Aeromonas veronii B565] Length = 242 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 114/227 (50%), Positives = 163/227 (71%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNPKM+ YIF R+ HII+L +TVPM A+ IS Sbjct: 1 MAKVSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A+ G++LFV TK AS+ V EAA+R Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 AAKKGKVLFVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD++FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+V++VDTNSNPD VDYVIPGNDD+ R++ L+ + A ++ A+ Sbjct: 181 IPVVSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEARAQ 227 >gi|269127616|ref|YP_003300986.1| 30S ribosomal protein S2 [Thermomonospora curvata DSM 43183] gi|268312574|gb|ACY98948.1| ribosomal protein S2 [Thermomonospora curvata DSM 43183] Length = 283 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 118/238 (49%), Positives = 165/238 (69%), Gaps = 3/238 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + I +TV Sbjct: 3 PVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFIKETV 62 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A GG ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + + +L++LEE+ Sbjct: 63 AHGGTILFVGTKKQAQEAIAEQAQRVGMPYVNQRWLGGMLTNFSTVHKRLTRLKELEEIN 122 Query: 124 NKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + G TKKE L ++R++DKL R L GIRDM +P +++VDT +E +A+ EA++L Sbjct: 123 YDDVAGSGMTKKELLGLKREKDKLARTLGGIRDMNKVPSAIWIVDTKKEHIAVNEAKKLG 182 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK 238 IP+VA++DTN +PD VDY IPGNDD+ RS++L +VA A DG +AR + G K Sbjct: 183 IPVVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVVADAVADGLLARAGAATGESDK 240 >gi|295396353|ref|ZP_06806519.1| 30S ribosomal protein S2 [Brevibacterium mcbrellneri ATCC 49030] gi|294970793|gb|EFG46702.1| 30S ribosomal protein S2 [Brevibacterium mcbrellneri ATCC 49030] Length = 313 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 116/227 (51%), Positives = 162/227 (71%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL QT+ + A + I +TVA G Sbjct: 5 TTRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLGYIDTAFEFIKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A+R Q VN +WLGGM+TN++T+S +++L++LEE+ + Sbjct: 65 GSIMFVGTKKQAQEAIAEQAQRVGQPFVNQRWLGGMLTNFQTISGRLRRLKELEEIDFDD 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R+++KL+R L GIRDM P +++VDT +E LA+ EA++L IPI Sbjct: 125 VAGSGHTKKELLILSREKEKLERTLGGIRDMQRTPSAVWIVDTKKEHLAVDEAKKLGIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 V ++DTN +PD VDY IPGNDDS RS+AL +VA A +G+ ++HS Sbjct: 185 VGILDTNCDPDEVDYPIPGNDDSIRSVALLTRVVADAVAEGLLKRHS 231 >gi|296139383|ref|YP_003646626.1| ribosomal protein S2 [Tsukamurella paurometabola DSM 20162] gi|296027517|gb|ADG78287.1| ribosomal protein S2 [Tsukamurella paurometabola DSM 20162] Length = 282 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 117/242 (48%), Positives = 168/242 (69%), Gaps = 8/242 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + + VA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKEAVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + E A R VN +WLGGM+TN++TV + +Q++++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRMKELETM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK---SA 240 ++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + G D K A Sbjct: 183 VIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGVAGGDAKPEAGA 242 Query: 241 GE 242 GE Sbjct: 243 GE 244 >gi|229820993|ref|YP_002882519.1| ribosomal protein S2 [Beutenbergia cavernae DSM 12333] gi|259494990|sp|C5BWU1|RS2_BEUC1 RecName: Full=30S ribosomal protein S2 gi|229566906|gb|ACQ80757.1| ribosomal protein S2 [Beutenbergia cavernae DSM 12333] Length = 353 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 123/262 (46%), Positives = 176/262 (67%), Gaps = 4/262 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + DTVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLTDIDRAFSFVKDTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ + +L++LEE+ + Sbjct: 65 GSILFVGTKKQAQEAVAEQASRVGMPYVNQRWLGGMLTNFQTVSKRLSRLKELEEIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL+R L GIR+M +P +++VDT +E LA+ EAR+L IP+ Sbjct: 125 VAASGRTKKELLMMRREKDKLERTLGGIREMAKVPSAVWIVDTKKEHLAVAEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VDY IPGNDD+ R++ L ++A A +G +AR + +A E Sbjct: 185 VAILDTNCDPDEVDYPIPGNDDAIRAVGLLTRVIADAVAEGTVARHGGSAPGEAGTAEEP 244 Query: 244 VVH-SKEGMQLEEDSQSSESSV 264 + +E +Q + D QSS ++ Sbjct: 245 LAEWERELLQGDTDEQSSAANT 266 >gi|313813388|gb|EFS51102.1| ribosomal protein S2 [Propionibacterium acnes HL025PA1] Length = 283 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 162/222 (72%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A A +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAVAEGL 226 >gi|109897574|ref|YP_660829.1| ribosomal protein S2 [Pseudoalteromonas atlantica T6c] gi|123171513|sp|Q15WG3|RS2_PSEA6 RecName: Full=30S ribosomal protein S2 gi|109699855|gb|ABG39775.1| SSU ribosomal protein S2P [Pseudoalteromonas atlantica T6c] Length = 243 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 115/226 (50%), Positives = 161/226 (71%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL I Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYIGSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK ASD V +AA + Q+ VN +WLGGM+TNWKTV QSI++L+DLE+ Sbjct: 61 ASKKGKILFVGTKRAASDSVRDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQ- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ F TKKE L ++R+ KL+ +L GI++MGGLPD +FVVD + E +AI EAR Sbjct: 120 -QSQDGTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARN 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V++VDTNSNPD VDY+IPGNDD+ R++ L+ + A A I+G Sbjct: 179 LGIPVVSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEG 224 >gi|269469077|gb|EEZ80632.1| ribosomal protein S2 [uncultured SUP05 cluster bacterium] Length = 321 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 114/246 (46%), Positives = 167/246 (67%), Gaps = 4/246 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++++LE+GV FGHR+ W+PKM+RYI+ RN HII+L +T+PM L S T Sbjct: 1 MAKTSMKKMLEAGVHFGHRSRFWHPKMDRYIYGTRNGVHIINLEKTLPMFNDMLNFASKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G ILFV TK ASD + E A R VN +WLGGMMTN+KT+ SI++L+DLE L Sbjct: 61 AAQGKSILFVGTKRAASDVMKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLEFL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + F KKE L + R+ +KL+R+L GI+D+GG+PD++F++D EK AI+EA++L + Sbjct: 121 AEENFTQFGKKEALMMTREMEKLERSLGGIKDLGGIPDVVFIIDIGHEKNAIREAQKLHL 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PI+ +VDTN NP+ +DYV+PGNDDS R+I+ + VA+A ++ A G T +A + Sbjct: 181 PIIGIVDTNHNPEGIDYVVPGNDDSIRAISYYAREVANAVLEAKAAA----GTQTSTAAK 236 Query: 243 TVVHSK 248 V K Sbjct: 237 KVTAKK 242 >gi|296268978|ref|YP_003651610.1| 30S ribosomal protein S2 [Thermobispora bispora DSM 43833] gi|296091765|gb|ADG87717.1| ribosomal protein S2 [Thermobispora bispora DSM 43833] Length = 303 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 116/240 (48%), Positives = 165/240 (68%), Gaps = 2/240 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + + +TV Sbjct: 3 PVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLSYIDRAYEFVKETV 62 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL- 122 A GG ILF+ TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 63 AHGGTILFIGTKKQAQEAIAEQASRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEEMD 122 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N G TKKE L R+++KL+R L GIRDM +P ++VVDT +E++A+ EAR+L Sbjct: 123 FDNVAGSGLTKKELLMRRREKEKLERTLGGIRDMTRVPSAVWVVDTKKEQIAVNEARKLG 182 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A A DG+ + D K +G Sbjct: 183 IPVVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVIADAVADGLMSRAGGARGDDKPSG 242 >gi|256379906|ref|YP_003103566.1| ribosomal protein S2 [Actinosynnema mirum DSM 43827] gi|255924209|gb|ACU39720.1| ribosomal protein S2 [Actinosynnema mirum DSM 43827] Length = 304 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 120/236 (50%), Positives = 163/236 (69%), Gaps = 4/236 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLMQTLTYIDRAFEFVRETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILF+ TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 65 GSILFIGTKKQAQEAIANEALRVGMPFVNQRWLGGMLTNFSTVHKRLQRLKELESMEQTG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 QGFTKKE L + R++DKL+R L GIRDM +P +++VDT +E +A+ EAR+L IPIV Sbjct: 125 GFQGFTKKEILMMNREKDKLERTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLNIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 A++DTN +PD VDY IPGNDD+ RS AL +VA AA G+ S G T +AG Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLM---SRSGVRTGNAG 237 >gi|256832236|ref|YP_003160963.1| 30S ribosomal protein S2 [Jonesia denitrificans DSM 20603] gi|256685767|gb|ACV08660.1| ribosomal protein S2 [Jonesia denitrificans DSM 20603] Length = 283 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 119/248 (47%), Positives = 171/248 (68%), Gaps = 2/248 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL++GV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A + + +TVARG Sbjct: 5 TMRQLLDAGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYEFVKETVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V E A R VN +WLGGM+TN++TV++ +Q+L++LE++ + Sbjct: 65 GSVLFVGTKKQAQEPVAEQASRVGMPYVNHRWLGGMLTNFQTVNKRLQRLKELEQIDFDD 124 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G +TKKE L + R++DKL R L G+RDM LP ++VVDTN+E LA+ EAR+L IP+ Sbjct: 125 VAGSVYTKKELLIMRREKDKLARTLGGLRDMSRLPSALWVVDTNKEHLAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA++DTN +PD VDY IPGNDD+ R++AL +VA A +G+ + AD + E Sbjct: 185 VAILDTNCDPDHVDYKIPGNDDAIRAVALLTRVVADAVAEGLVARSKGGKADAEPLAEWE 244 Query: 245 VHSKEGMQ 252 EG Q Sbjct: 245 RELLEGGQ 252 >gi|302389815|ref|YP_003825636.1| SSU ribosomal protein S2P [Thermosediminibacter oceani DSM 16646] gi|302200443|gb|ADL08013.1| SSU ribosomal protein S2P [Thermosediminibacter oceani DSM 16646] Length = 233 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 112/235 (47%), Positives = 168/235 (71%), Gaps = 9/235 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV +++A + + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTVKKMEEAYEFVKNLAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + + E AKR + VN +WLGGM+TN+KT+ + I++L++LE + Sbjct: 64 GGKILFVGTKKQAQESIQEEAKRCEMFYVNQRWLGGMLTNFKTIKKRIERLKELERM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE LN+ R++++L++ L GI++M LPD +FVVD +EK+A+ EAR+L+ Sbjct: 121 EEEGVFNVLPKKEVLNLRREKERLEKYLGGIKNMTSLPDALFVVDPRKEKIAVSEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+A+VDTN +PD VDYVIPGNDD+ R++ L + +A A ++G +Q M A+ Sbjct: 181 IPIIAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTEKIADAVLEG--KQGVQMAAE 233 >gi|256390727|ref|YP_003112291.1| 30S ribosomal protein S2 [Catenulispora acidiphila DSM 44928] gi|256356953|gb|ACU70450.1| ribosomal protein S2 [Catenulispora acidiphila DSM 44928] Length = 344 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 116/241 (48%), Positives = 166/241 (68%), Gaps = 2/241 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN+ +IIDL Q++ + +A + + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTERNSIYIIDLQQSLSYIDRAYEFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ++F+ TK QA + + E A R VN +WLGGM+TN+ TV + IQ+LR+LEE+ + Sbjct: 65 GTVMFIGTKKQAQEAIAEQATRVGMPYVNHRWLGGMLTNFSTVYKRIQRLRELEEVDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R+++KL+R L GIRDM +P +++VDT +E +A+ EAR+LRIP+ Sbjct: 125 VASSGMTKKELLVMRREKEKLERTLGGIRDMSRVPSAVWIVDTKKEHIAVGEARKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA++DTN +PD VDY IPGNDD+ RS+AL +VA A DG+ + + + AG Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVALLTRVVADAVADGLMSRAGSKSGEGEQAGAVA 244 Query: 245 V 245 V Sbjct: 245 V 245 >gi|314957520|gb|EFT01623.1| ribosomal protein S2 [Propionibacterium acnes HL002PA1] Length = 283 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 162/222 (72%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 65 GQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAMDFDK 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 125 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ S++L ++A AA +G+ Sbjct: 185 VAILDTNCDPDEVDYAIPGNDDAILSVSLLTRIIADAAAEGL 226 >gi|153003171|ref|YP_001377496.1| 30S ribosomal protein S2 [Anaeromyxobacter sp. Fw109-5] gi|209573648|sp|A7H716|RS2_ANADF RecName: Full=30S ribosomal protein S2 gi|152026744|gb|ABS24512.1| ribosomal protein S2 [Anaeromyxobacter sp. Fw109-5] Length = 315 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 115/228 (50%), Positives = 162/228 (71%), Gaps = 1/228 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + AL+ +SD VA+ Sbjct: 12 ITMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVGLARGALRFVSDAVAK 71 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D + E A RS QY V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 72 GGMVLFVGTKKQAQDAIREEASRSGQYHVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 131 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE +ER+R+KL++ L GI++M LP +FV+DT +E +A+ EA RL IP+ Sbjct: 132 GTYERLPKKEVAQLEREREKLEKNLGGIKEMSRLPAAIFVIDTKKEHIAVHEANRLGIPV 191 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 VAVVDTN +P+ ++YVIPGNDD+ RSI LF +A A I+G AR ++ Sbjct: 192 VAVVDTNCDPEGIEYVIPGNDDAIRSIRLFTGKIAEACIEGRARYSTW 239 >gi|297559218|ref|YP_003678192.1| ribosomal protein S2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843666|gb|ADH65686.1| ribosomal protein S2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 314 Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 160/222 (72%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + + TVA G Sbjct: 6 TIRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLAYIDRAYEFVKQTVAHG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + E A+R VN +WLGGM+TN+ TV + +Q+L++LEE+ + Sbjct: 66 GTVLFVGTKKQAQEAIDEQARRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEEIDFDD 125 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE LN+ R+++KL+R L GIRDM +P +++VDT +E +AI EAR+L IP+ Sbjct: 126 VAGSSLTKKELLNLRREKEKLERTLGGIRDMSRVPSAVWIVDTKKEHIAISEARKLNIPV 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L +VA A DG+ Sbjct: 186 VAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVVADAVADGL 227 >gi|221133314|ref|ZP_03559619.1| ribosomal protein S2 [Glaciecola sp. HTCC2999] Length = 242 Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL +S Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYVSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++ G++LFV TK A + V EAA + Q+ VN +WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 ASKKGKVLFVGTKRAAGEAVKEAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L ++R+ KL+ +L GI+DMGGLPD++FV+D + E +A+ EAR L Sbjct: 121 SQDGTFDKLTKKEVLMLQREMTKLESSLGGIKDMGGLPDVIFVIDADHEHIAVTEARNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V VVDTNSNPD VDY+IPGNDD+ R+I L+ + A A I G Sbjct: 181 IPVVGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADAVISG 224 >gi|242240397|ref|YP_002988578.1| 30S ribosomal protein S2 [Dickeya dadantii Ech703] gi|242132454|gb|ACS86756.1| ribosomal protein S2 [Dickeya dadantii Ech703] Length = 241 Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 116/220 (52%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAAVNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VDY+IPGNDD+ R++ L+ VA+A +G Sbjct: 185 AIVDTNSDPDGVDYIIPGNDDAIRAVTLYLSAVATAVREG 224 >gi|320096222|ref|ZP_08027808.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 178 str. F0338] gi|319976848|gb|EFW08605.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 178 str. F0338] Length = 276 Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 121/239 (50%), Positives = 165/239 (69%), Gaps = 3/239 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A+R VN +WLGGM+TN+ TVS+ +Q+L++LE++ ++ Sbjct: 65 GTILFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVSRRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+L IPI Sbjct: 125 VAASGHTKKELLMMSREKDKLARTLGGIRDMAKVPSAVWIVDPKKEHLAVSEARKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 VA++DTN++PD VDY IPGNDD+ R++AL +VA A +G IAR + G ++A E Sbjct: 185 VAILDTNADPDEVDYRIPGNDDAIRAVALLTRVVADAVAEGLIARSDARKGKGEETAAE 243 >gi|325267206|ref|ZP_08133872.1| 30S ribosomal protein S2 [Kingella denitrificans ATCC 33394] gi|324981339|gb|EGC16985.1| 30S ribosomal protein S2 [Kingella denitrificans ATCC 33394] Length = 249 Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 163/224 (72%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A +V+ Sbjct: 10 MSQITMRQMIEAGVHFGHQTRYWNPKMAQYIFGVRNKIHIINLEKTVPLFQEAQEVVRRL 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A+R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 70 VANKGTVLFVGTKRQARDIIKEEAQRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKAAV 129 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N E G+ KKE L++ R+ +KL+R+L GI+DM GLPD +FV+DT + + EA +L Sbjct: 130 LANAETSGYNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLG 189 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVD+N++PDLV ++IPGNDDS+++I L+C +A A ++G Sbjct: 190 IPVIAVVDSNNSPDLVKHIIPGNDDSAKAIRLYCRGIADAVLEG 233 >gi|251790745|ref|YP_003005466.1| 30S ribosomal protein S2 [Dickeya zeae Ech1591] gi|247539366|gb|ACT07987.1| ribosomal protein S2 [Dickeya zeae Ech1591] Length = 241 Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 115/220 (52%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VDY+IPGNDD+ R+++L+ VA+A +G Sbjct: 185 AIVDTNSDPDGVDYIIPGNDDAIRAVSLYLSAVAAAVREG 224 >gi|294787815|ref|ZP_06753059.1| ribosomal protein S2 [Simonsiella muelleri ATCC 29453] gi|294484108|gb|EFG31791.1| ribosomal protein S2 [Simonsiella muelleri ATCC 29453] Length = 242 Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 161/222 (72%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A V+ VA Sbjct: 4 QITMRQMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQDVVRRLVA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 G +LFV TK QA D + E A+R+ V+ +WLGGM+TN+KTV QSI++L + +L Sbjct: 64 NKGTVLFVGTKRQARDIIKEEAERAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKSTVLA 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N E G+ KKE L++ R+ +KL+R+L GI+DM GLPD +FV+DT + + EA +L IP Sbjct: 124 NAEASGYNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++AVVD+N++PDLV +VIPGNDDS+++I L+C +A A ++G Sbjct: 184 VIAVVDSNNSPDLVKHVIPGNDDSAKAIRLYCRGIADAVLEG 225 >gi|94500622|ref|ZP_01307152.1| ribosomal protein S2 [Oceanobacter sp. RED65] gi|94427177|gb|EAT12157.1| ribosomal protein S2 [Oceanobacter sp. RED65] Length = 246 Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R LL++GV FGH+ WNPKM +YIF RN HII+L TVP +AL V+ Sbjct: 1 MAQVSMRDLLKAGVHFGHQTRYWNPKMSQYIFGARNKIHIINLEHTVPAFNEALNVVKGL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A+ +ILFV TK AS + + A R+ Q V +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 61 AAKNNKILFVGTKRAASKVMQDQASRAGQPFVAHRWLGGMLTNYKTIRQSIKRLRDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ DKL+R++ GI+DMGGLPD +FV+D + E++AIQEA +L Sbjct: 121 QKDGTFEQLTKKEALMRTREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ +VDTNSNPD VD+VIPGNDD+ R+I +F +A A I+G Sbjct: 181 IPVIGIVDTNSNPDGVDHVIPGNDDAIRAIEIFTTAIADACIEG 224 >gi|145224713|ref|YP_001135391.1| 30S ribosomal protein S2 [Mycobacterium gilvum PYR-GCK] gi|315445043|ref|YP_004077922.1| 30S ribosomal protein S2P [Mycobacterium sp. Spyr1] gi|189044945|sp|A4TC67|RS2_MYCGI RecName: Full=30S ribosomal protein S2 gi|145217199|gb|ABP46603.1| SSU ribosomal protein S2P [Mycobacterium gilvum PYR-GCK] gi|315263346|gb|ADU00088.1| SSU ribosomal protein S2P [Mycobacterium sp. Spyr1] Length = 279 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 115/239 (48%), Positives = 170/239 (71%), Gaps = 6/239 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + A + + +TVA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDSAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + + A R VN +WLGGM+TN++TV + +Q++++LE + ++ Sbjct: 65 GSIMFVGTKKQAQESIAQEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRMKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E LA+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHLAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 I+A++DTN +PD+VDY IPGNDD+ RS AL ++ASA +G+ + + GAD AG+ Sbjct: 183 IIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGL-QARAGAGADKAEAGQ 240 >gi|120403200|ref|YP_953029.1| 30S ribosomal protein S2 [Mycobacterium vanbaalenii PYR-1] gi|166225286|sp|A1T773|RS2_MYCVP RecName: Full=30S ribosomal protein S2 gi|119956018|gb|ABM13023.1| SSU ribosomal protein S2P [Mycobacterium vanbaalenii PYR-1] Length = 273 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 115/223 (51%), Positives = 162/223 (72%), Gaps = 5/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GSIMFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E LA+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHLAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I+A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ Sbjct: 183 IIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGL 225 >gi|92112696|ref|YP_572624.1| SSU ribosomal protein S2P [Chromohalobacter salexigens DSM 3043] gi|123265800|sp|Q1R033|RS2_CHRSD RecName: Full=30S ribosomal protein S2 gi|91795786|gb|ABE57925.1| SSU ribosomal protein S2P [Chromohalobacter salexigens DSM 3043] Length = 246 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 155/224 (69%), Gaps = 5/224 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM +YIF RN HII+L T+P L AL VI Sbjct: 1 MAQVNMRDLLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEHTLPALNDALAVIEKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA +ILFV TK AS V E A+R+ Q VN +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 VASNNKILFVGTKRAASKIVKEEARRAGQPFVNHRWLGGMLTNFKTIRVSIKRLRELEAM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L R++DKL+R++ GI+DMGGLPD +FVVD + E++AI EA + Sbjct: 121 --HEDGTFEKLTKKEVLMATREQDKLERSVGGIKDMGGLPDALFVVDVDHERIAINEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 L IP++ VVDTNSNPD VDYVIPGNDDS R+I ++ VA + Sbjct: 179 LGIPVIGVVDTNSNPDGVDYVIPGNDDSIRAIQIYAQAVADVCV 222 >gi|307129820|ref|YP_003881836.1| 30S ribosomal subunit protein S2 [Dickeya dadantii 3937] gi|306527349|gb|ADM97279.1| 30S ribosomal subunit protein S2 [Dickeya dadantii 3937] Length = 241 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 115/220 (52%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VDY+IPGNDD+ R+++L+ VA+A +G Sbjct: 185 AIVDTNSDPDGVDYIIPGNDDAIRAVSLYLGAVATAVREG 224 >gi|256823127|ref|YP_003147090.1| 30S ribosomal protein S2 [Kangiella koreensis DSM 16069] gi|256796666|gb|ACV27322.1| ribosomal protein S2 [Kangiella koreensis DSM 16069] Length = 244 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 117/237 (49%), Positives = 163/237 (68%), Gaps = 7/237 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNP+M YIF RN HII+L +TVPM AL + Sbjct: 1 MSKVSMRDMLQAGVHFGHKTRFWNPQMRPYIFGARNKIHIINLEETVPMFNDALNYLGKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK AS+ V E A RS Q+ V+ +WLGGM+TN+KT+ SI +L+DLE+ Sbjct: 61 ASNKGKILFVGTKRAASEIVKEEATRSGQFFVDKRWLGGMLTNYKTIRGSINRLKDLEK- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L R+ +KL+ ++ GI++MGGLPD++FV+D + E +AI EA + Sbjct: 120 -QSEDGTFERLTKKEALMRRREMEKLEASIGGIKNMGGLPDVLFVIDADHENIAIAEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 + IP+VAVVDTNSNP VDY+IPGNDD+ R+I L+C VA A +DG +Q S AD Sbjct: 179 MGIPVVAVVDTNSNPKGVDYIIPGNDDAIRAIRLYCAAVADAVLDG--KQSSATTAD 233 >gi|209574092|sp|A7N1X7|RS2_VIBHB RecName: Full=30S ribosomal protein S2 Length = 242 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+D E + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEG 224 >gi|116620034|ref|YP_822190.1| 30S ribosomal protein S2 [Candidatus Solibacter usitatus Ellin6076] gi|122255565|sp|Q02AL1|RS2_SOLUE RecName: Full=30S ribosomal protein S2 gi|116223196|gb|ABJ81905.1| SSU ribosomal protein S2P [Candidatus Solibacter usitatus Ellin6076] Length = 303 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 111/227 (48%), Positives = 162/227 (71%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M + A + + + Sbjct: 1 MPAISMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKDAARFVGEM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G +LFV TK QA + + E A R Y VN +WLGG++TN TV +SI++L++LE + Sbjct: 61 AAQGKNVLFVGTKRQAQEAIAEEANRCQMYYVNQRWLGGLLTNMLTVQKSIKRLKELEAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + E G KKE + +ER+R L + L GI+DM GLPD++FV+D+N+E +A++EARRL Sbjct: 121 ASVEGGYAGRPKKEVIRLERERKHLDQNLSGIKDMPGLPDVLFVIDSNKEGIAVKEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN +PD VD+VIPGNDD+ R+I LF +A A ++G A Sbjct: 181 GIPVVAIVDTNCDPDEVDWVIPGNDDALRAIRLFASKIADAVVEGRA 227 >gi|59802284|ref|YP_208996.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA 1090] gi|239999943|ref|ZP_04719867.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02] gi|240013111|ref|ZP_04720024.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI18] gi|254492702|ref|ZP_05105873.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 1291] gi|268595749|ref|ZP_06129916.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02] gi|268600187|ref|ZP_06134354.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11] gi|268600288|ref|ZP_06134455.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18] gi|268602520|ref|ZP_06136687.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1] gi|268681069|ref|ZP_06147931.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332] gi|268685253|ref|ZP_06152115.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679] gi|268685549|ref|ZP_06152411.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035] gi|291044915|ref|ZP_06570624.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2] gi|293397988|ref|ZP_06642194.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae F62] gi|75507281|sp|Q5F5F3|RS2_NEIG1 RecName: Full=30S ribosomal protein S2 gi|59719179|gb|AAW90584.1| putative 30S ribosomal protein S2 [Neisseria gonorrhoeae FA 1090] gi|226511742|gb|EEH61087.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 1291] gi|268549138|gb|EEZ44556.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02] gi|268584318|gb|EEZ48994.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11] gi|268584419|gb|EEZ49095.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18] gi|268586651|gb|EEZ51327.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1] gi|268621353|gb|EEZ53753.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332] gi|268625537|gb|EEZ57937.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679] gi|268625833|gb|EEZ58233.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035] gi|291011809|gb|EFE03805.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2] gi|291611934|gb|EFF41003.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae F62] Length = 242 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|108798961|ref|YP_639158.1| 30S ribosomal protein S2 [Mycobacterium sp. MCS] gi|119868076|ref|YP_938028.1| 30S ribosomal protein S2 [Mycobacterium sp. KMS] gi|126434561|ref|YP_001070252.1| 30S ribosomal protein S2 [Mycobacterium sp. JLS] gi|123070324|sp|Q1BAI2|RS2_MYCSS RecName: Full=30S ribosomal protein S2 gi|166225284|sp|A3PXY4|RS2_MYCSJ RecName: Full=30S ribosomal protein S2 gi|166225285|sp|A1UEI0|RS2_MYCSK RecName: Full=30S ribosomal protein S2 gi|108769380|gb|ABG08102.1| SSU ribosomal protein S2P [Mycobacterium sp. MCS] gi|119694165|gb|ABL91238.1| SSU ribosomal protein S2P [Mycobacterium sp. KMS] gi|126234361|gb|ABN97761.1| SSU ribosomal protein S2P [Mycobacterium sp. JLS] Length = 284 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/223 (51%), Positives = 162/223 (72%), Gaps = 5/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GSIMFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E LA+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHLAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I+A++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ Sbjct: 183 IIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGL 225 >gi|271499495|ref|YP_003332520.1| 30S ribosomal protein S2 [Dickeya dadantii Ech586] gi|270343050|gb|ACZ75815.1| ribosomal protein S2 [Dickeya dadantii Ech586] Length = 241 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQKRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VDY+IPGNDD+ R+++L+ + VA+A +G Sbjct: 185 AIVDTNSDPDGVDYIIPGNDDAIRAVSLYLNAVAAAVREG 224 >gi|260767825|ref|ZP_05876760.1| SSU ribosomal protein S2p (SAe) [Vibrio furnissii CIP 102972] gi|260617334|gb|EEX42518.1| SSU ribosomal protein S2p (SAe) [Vibrio furnissii CIP 102972] gi|315179345|gb|ADT86259.1| 30S ribosomal protein S2 [Vibrio furnissii NCTC 11218] Length = 242 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNWKTVRQSIKRLKDLETQSTDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VD+VIPGNDD+ R++ L+ + VA + +G Sbjct: 185 AVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAVAESVNEG 224 >gi|326803587|ref|YP_004321405.1| ribosomal protein S2 [Aerococcus urinae ACS-120-V-Col10a] gi|326650183|gb|AEA00366.1| ribosomal protein S2 [Aerococcus urinae ACS-120-V-Col10a] Length = 261 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/226 (50%), Positives = 158/226 (69%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL QTV +L KA V+ D Sbjct: 1 MSQVTMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQQTVKLLDKAYNVVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + E A R QY VN +WLGG++TNW T+ +SIQ++RD++ + Sbjct: 61 AANGGNILFVGTKKQAQQAIEEEALRCGQYYVNHRWLGGLLTNWDTIQKSIQRMRDIDRM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +E+ F KKE + ++R+KL+ L G+ DM LPD +FVVD +E++A+ EA++ Sbjct: 121 --EEDGTFDVLPKKEVSELNKEREKLENNLGGMADMPSLPDAIFVVDPRKEEIAVNEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IPI+A+VDTN +PD +DYVIP NDD+ R+I L +A A ++G Sbjct: 179 LNIPIIAMVDTNCDPDDIDYVIPSNDDAIRAIRLIASTLADAVLEG 224 >gi|464713|sp|P34831|RS2_SPIPL RecName: Full=30S ribosomal protein S2 gi|296030|emb|CAA37700.1| ribosomal protein S2 [Arthrospira platensis] gi|227458|prf||1704175A ribosomal protein S2 Length = 251 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 115/230 (50%), Positives = 156/230 (67%), Gaps = 3/230 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R +L++GV FGH+ WNPKM+ YIF RN HI++L +T+P+ AL ++ Sbjct: 1 MPSVTMRDMLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIVNLEKTLPLFNDALGFVNKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK A V E A R V+ +WLGGM+TNWKT+ QSI++ RDLE Sbjct: 61 ASSNNTILFVGTKRAAQKAVAEEATRCGMPYVDHRWLGGMLTNWKTIRQSIKRFRDLEAQ 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N TKKE L R+ +KL+R++ GI+DMGGLPD +FV+D + E +A+QEAR+L Sbjct: 121 ANDGTFDKLTKKEALMRRREMEKLERSIGGIKDMGGLPDALFVIDVDHEDIAVQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP++AVVDTNSNPD VDY IPGNDD+ R+I L+ VA A I+G RQ++ Sbjct: 181 IPVIAVVDTNSNPDGVDYFIPGNDDAIRAIQLYVGAVADAIIEG--RQYA 228 >gi|226940993|ref|YP_002796067.1| 30S ribosomal protein S2 [Laribacter hongkongensis HLHK9] gi|226715920|gb|ACO75058.1| RpsB [Laribacter hongkongensis HLHK9] Length = 244 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 161/225 (71%), Gaps = 1/225 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+RQ+LE+GV FGH+ WNPKM +YIF RN HII+L +T+PM +A + A Sbjct: 4 QVTMRQMLEAGVHFGHQTRFWNPKMNQYIFGARNKIHIINLEKTLPMFIEAQNYVRRLAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 G+ILFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L D LL Sbjct: 64 NKGQILFVGTKRQAREIIREEASRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEDKMALLG 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N + G+ KKE L+++R+ +KL+R+L GI+DM GLPD +F++DT +K + EA++L IP Sbjct: 124 NADQTGYNKKELLDLQREVEKLERSLGGIKDMKGLPDAIFIIDTGYQKGTLTEAKKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++ VVDTN+NPD +DYV+PGNDDS+R+I L+ +A A ++G A+ Sbjct: 184 VIGVVDTNNNPDGIDYVVPGNDDSARAIRLYARGMADAVLEGRAQ 228 >gi|209573717|sp|Q0RDQ4|RS2_FRAAA RecName: Full=30S ribosomal protein S2 Length = 291 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/241 (50%), Positives = 166/241 (68%), Gaps = 5/241 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +TVA G Sbjct: 5 TMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ + Sbjct: 65 GTVLFIGTKKQAQEAIEEQAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEIEVTG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+V Sbjct: 125 GTEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTK---SAG 241 A++DTN +PD VDY IPGNDD+ RS AL +VA A DG+ AR + AD K SAG Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASKAADAKPEQSAG 244 Query: 242 E 242 E Sbjct: 245 E 245 >gi|227114687|ref|ZP_03828343.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227326537|ref|ZP_03830561.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253687337|ref|YP_003016527.1| ribosomal protein S2 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261822599|ref|YP_003260705.1| 30S ribosomal protein S2 [Pectobacterium wasabiae WPP163] gi|259495220|sp|C6DAI3|RS2_PECCP RecName: Full=30S ribosomal protein S2 gi|251753915|gb|ACT11991.1| ribosomal protein S2 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261606612|gb|ACX89098.1| ribosomal protein S2 [Pectobacterium wasabiae WPP163] Length = 241 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 115/220 (52%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD VDY+IPGNDD+ R+++L+ VA+A +G Sbjct: 185 AVVDTNSDPDGVDYIIPGNDDAIRAVSLYLSAVATAVREG 224 >gi|240081840|ref|ZP_04726383.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19] gi|268597936|ref|ZP_06132103.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19] gi|268551724|gb|EEZ46743.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19] Length = 242 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+G+ FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGIHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|284008520|emb|CBA75043.1| 30S ribosomal protein S2 [Arsenophonus nasoniae] Length = 241 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ YIF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKTYIFGVRNKVHIINLEKTVPMFNEALAELTKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ + EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAIKEAANGCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELSKLENSLGGIKEMGGLPDALFVIDAEHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VDY+IPGNDD+ R++ L+ D VA A +G Sbjct: 185 AIVDTNSDPDGVDYIIPGNDDAIRAVKLYLDAVAKAVHEG 224 >gi|198283284|ref|YP_002219605.1| 30S ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667004|ref|YP_002425872.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247805|gb|ACH83398.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519217|gb|ACK79803.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 250 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE+GV FGH++ W+PKM Y+F ERN HII+L T+PML+ AL + + Sbjct: 6 TMRALLEAGVHFGHQSRYWHPKMAPYLFGERNRIHIINLEHTLPMLRTALSFVEQISRKH 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 GRILFV TK QA + V + A+RS + VN +WLGG +TN+KT+ QSI++L +L+++ + Sbjct: 66 GRILFVGTKRQAREAVEQEARRSGAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQMTADG 125 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L + R+RDKL+R+L GI+DM GLPD +FV+D E +A+ EAR+L IP++ Sbjct: 126 TMEKLTKKEGLTLTRERDKLERSLGGIKDMNGLPDAIFVIDVGHENIAVLEARKLGIPVI 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVD+N +P L+D+ IPGNDD++R+I L+ LVA A +DG Sbjct: 186 GVVDSNCDPLLIDFPIPGNDDATRAIRLYASLVADAILDG 225 >gi|320540032|ref|ZP_08039688.1| 30S ribosomal subunit protein S2 [Serratia symbiotica str. Tucson] gi|320029881|gb|EFW11904.1| 30S ribosomal subunit protein S2 [Serratia symbiotica str. Tucson] Length = 241 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 158/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNAALAELTKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAAHNCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +LDGI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELAKLENSLDGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLTAVATAVREG 224 >gi|156975506|ref|YP_001446413.1| 30S ribosomal protein S2 [Vibrio harveyi ATCC BAA-1116] gi|156527100|gb|ABU72186.1| hypothetical protein VIBHAR_03237 [Vibrio harveyi ATCC BAA-1116] Length = 253 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 16 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKK 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+D E + + Sbjct: 76 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQAQDG 135 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 136 TFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 195 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G Sbjct: 196 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEG 235 >gi|153835674|ref|ZP_01988341.1| ribosomal protein S2 [Vibrio harveyi HY01] gi|148867698|gb|EDL66967.1| ribosomal protein S2 [Vibrio harveyi HY01] Length = 242 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+D E + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEG 224 >gi|162148791|ref|YP_001603252.1| 30S ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] gi|161787368|emb|CAP56963.1| 30S ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] Length = 248 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 113/189 (59%), Positives = 151/189 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML +AL+ I Sbjct: 52 MAMPDFTMRQLLEAGVHFGHHTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLDRALKAIR 111 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D + EAAKRS QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 112 DTVAGGGRVLFVGTKRAAADQIAEAAKRSGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 171 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L + G TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L Sbjct: 172 DMLTGDTHGLTKKEILDITRNREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKL 231 Query: 181 RIPIVAVVD 189 IP+VA++D Sbjct: 232 GIPVVAILD 240 >gi|262166337|ref|ZP_06034074.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus VM223] gi|262170771|ref|ZP_06038449.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus MB-451] gi|261891847|gb|EEY37833.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus MB-451] gi|262026053|gb|EEY44721.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus VM223] Length = 242 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 1 MASVSMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + VA A +G Sbjct: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEAINEG 224 >gi|238759949|ref|ZP_04621103.1| 30S ribosomal protein S2 [Yersinia aldovae ATCC 35236] gi|238701856|gb|EEP94419.1| 30S ribosomal protein S2 [Yersinia aldovae ATCC 35236] Length = 241 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 160/222 (72%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNQALAELTKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAAHNSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELTKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ + VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVATAVREG 224 >gi|240170590|ref|ZP_04749249.1| 30S ribosomal protein S2 [Mycobacterium kansasii ATCC 12478] Length = 281 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 115/240 (47%), Positives = 165/240 (68%), Gaps = 5/240 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILGLTREKNKLERSLGGIRDMSKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K ET Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGLGRGDGKPEAET 242 >gi|157962704|ref|YP_001502738.1| 30S ribosomal protein S2 [Shewanella pealeana ATCC 700345] gi|189044995|sp|A8H6L6|RS2_SHEPA RecName: Full=30S ribosomal protein S2 gi|157847704|gb|ABV88203.1| ribosomal protein S2 [Shewanella pealeana ATCC 700345] Length = 242 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + EAA QY V+ +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+++L GI++M GLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD ++Y+IPGNDD+ RSI L+ VA+AA G Sbjct: 185 AVVDTNSSPDGINYIIPGNDDAMRSIRLYTQSVAAAAKAG 224 >gi|146328956|ref|YP_001209631.1| ribosomal protein S2 [Dichelobacter nodosus VCS1703A] gi|166225268|sp|A5EV13|RS2_DICNV RecName: Full=30S ribosomal protein S2 gi|146232426|gb|ABQ13404.1| ribosomal protein S2 [Dichelobacter nodosus VCS1703A] Length = 267 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 123/260 (47%), Positives = 168/260 (64%), Gaps = 7/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R L E+G FGHR WNPKM YI+ +R + HII+L QTVPML AL +S Sbjct: 1 MTQVSMRDLFEAGAHFGHRARFWNPKMAPYIYGKRGDIHIINLEQTVPMLNDALNFLSAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GGR++FV TK ASD + EAA R VN +WLGGMMTN+KT+ QSI++L ++E++ Sbjct: 61 VGNGGRVMFVGTKRSASDAISEAASRCGMPYVNFRWLGGMMTNFKTIRQSIRRLEEIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE + +ER+R+KL RAL GIR M LPD++FVVD E++AIQEA +L Sbjct: 121 AEDGTYDKLSKKEVIVLEREREKLARALTGIRSMKHLPDVLFVVDVGHERIAIQEAMKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTN++ + VDY+IPGNDDS R+I L+ + AA D I +H+ A + Sbjct: 181 IPVVGVVDTNNDIEGVDYIIPGNDDSVRAIRLYVN----AAADTI--EHAKAAAAVRGGD 234 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 E + EE S + E Sbjct: 235 NAEEELAEAISQEEPSAAEE 254 >gi|300783892|ref|YP_003764183.1| 30S ribosomal protein S2 [Amycolatopsis mediterranei U32] gi|299793406|gb|ADJ43781.1| small subunit ribosomal protein S2 [Amycolatopsis mediterranei U32] Length = 291 Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 117/244 (47%), Positives = 165/244 (67%), Gaps = 1/244 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + I +TVA G Sbjct: 5 TMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQQTLTYIDRAYEFIKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + A R VN +WLGGM+TN++TV + + +L++LE Sbjct: 65 GTIMFVGTKKQAQEAIANEAARVGMPYVNQRWLGGMLTNFQTVHKRLLRLKELEAREQTG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G TK+E L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L IP+V Sbjct: 125 GFEGLTKREILTLTREKDKLEKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLNIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A++DTN +PD VDY IPGNDD+ RS AL +VA AA G+ ++ S GA S E V Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMQRSSRNGASADSKPEPGV 244 Query: 246 HSKE 249 + E Sbjct: 245 AADE 248 >gi|86742262|ref|YP_482662.1| 30S ribosomal protein S2 [Frankia sp. CcI3] gi|86569124|gb|ABD12933.1| SSU ribosomal protein S2P [Frankia sp. CcI3] Length = 289 Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 121/241 (50%), Positives = 166/241 (68%), Gaps = 5/241 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +TVA G Sbjct: 5 TMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ + Sbjct: 65 GTVLFIGTKKQAQEAIEEHAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEIEVTG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+V Sbjct: 125 GTEVRTKKEQLVLTREKVKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTK---SAG 241 A++DTN +PD VDY IPGNDD+ RS AL +VA A DG+ AR + AD K SAG Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASSSADAKPEQSAG 244 Query: 242 E 242 E Sbjct: 245 E 245 >gi|269960591|ref|ZP_06174963.1| 30S ribosomal protein S2 [Vibrio harveyi 1DA3] gi|269834668|gb|EEZ88755.1| 30S ribosomal protein S2 [Vibrio harveyi 1DA3] Length = 253 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 16 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKK 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+D E + + Sbjct: 76 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQAQDG 135 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 136 TFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 195 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G Sbjct: 196 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVSEG 235 >gi|269214597|ref|ZP_05986884.2| ribosomal protein S2 [Neisseria lactamica ATCC 23970] gi|269209357|gb|EEZ75812.1| ribosomal protein S2 [Neisseria lactamica ATCC 23970] Length = 253 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 160/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 10 IKMSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVR 69 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 70 RLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKT 129 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA + Sbjct: 130 AALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEK 189 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 190 LGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 235 >gi|220915416|ref|YP_002490720.1| ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-1] gi|219953270|gb|ACL63654.1| ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-1] Length = 343 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 162/229 (70%), Gaps = 1/229 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV + + AL+ +SD+VA+ Sbjct: 41 ITMKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAK 100 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D + E A RS Q+ V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 101 GGSVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 160 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE +ER+R+KL++ L GI+++ LP +FV+DT +E +A+ EA RL IP+ Sbjct: 161 GTYERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDTKKEHIAVHEANRLGIPV 220 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 VAVVDTN +P+ +DYVIPGNDD+ RSI LF VA A I+G R +++ Sbjct: 221 VAVVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGKGRYSAWV 269 >gi|148272563|ref|YP_001222124.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166225260|sp|A5CQS5|RS2_CLAM3 RecName: Full=30S ribosomal protein S2 gi|147830493|emb|CAN01428.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 315 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 116/259 (44%), Positives = 174/259 (67%), Gaps = 1/259 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLL+ GV FGH WNPKM+R+IF ER+ +IIDL Q++ ++ KA + +TVA G Sbjct: 5 TIRQLLDCGVHFGHPKTRWNPKMKRFIFTERSGIYIIDLQQSLALIDKAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G ILFV TK QA + + E A+R Q VN +WLGG++TN++TV + + +L++L+ + + Sbjct: 65 GTILFVGTKKQAQESIAEQAQRVGQPYVNQRWLGGLLTNFQTVHKRLNRLKELDLVDFDD 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +GFTKKE L R+RDKL+++L GIR++ P M+VVDT +E LAI EAR+L IP++ Sbjct: 125 TTRGFTKKELLIQRRERDKLEKSLGGIRNLTKTPSAMWVVDTKKEHLAIDEARKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 ++DTN +PD V Y IPGNDD+ RS+AL ++A AA +G+ ++H A+ + E + Sbjct: 185 GILDTNCDPDEVQYPIPGNDDAIRSVALLTRIIADAAAEGLIQRHQKPDAEGSAPAEPLA 244 Query: 246 HSKEGMQLEEDSQSSESSV 264 + + + D+ +E V Sbjct: 245 DWERELLEQGDAAKAELPV 263 >gi|225023956|ref|ZP_03713148.1| hypothetical protein EIKCOROL_00823 [Eikenella corrodens ATCC 23834] gi|224942981|gb|EEG24190.1| hypothetical protein EIKCOROL_00823 [Eikenella corrodens ATCC 23834] Length = 247 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ+LE+GV FGH+ WNPKME+YIF RN HII+L +T+P+ Q+A + Sbjct: 1 MSQITMRQMLEAGVHFGHQTRYWNPKMEQYIFGARNKIHIINLEKTLPLFQEAQDAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA D V E A R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 61 AANKGTILFVGTKRQARDIVREEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKAAI 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N E G+ KKE L I+R+ +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAEASGYNKKELLTIQREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLTEAGKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ VVDTN++P+ V +VIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIGVVDTNNDPEGVKHVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|170727620|ref|YP_001761646.1| 30S ribosomal protein S2 [Shewanella woodyi ATCC 51908] gi|238688708|sp|B1KNU3|RS2_SHEWM RecName: Full=30S ribosomal protein S2 gi|169812967|gb|ACA87551.1| ribosomal protein S2 [Shewanella woodyi ATCC 51908] Length = 242 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 161/220 (73%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + E+A QY V+ +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD ++Y++PGNDD+ RSI L+ + VA+AA G Sbjct: 185 AVVDTNSSPDGINYIVPGNDDAMRSIRLYTESVAAAAKAG 224 >gi|325129310|gb|EGC52148.1| ribosomal protein S2 [Neisseria meningitidis OX99.30304] gi|325133276|gb|EGC55942.1| ribosomal protein S2 [Neisseria meningitidis M13399] gi|325135329|gb|EGC57950.1| ribosomal protein S2 [Neisseria meningitidis M0579] gi|325143512|gb|EGC65833.1| ribosomal protein S2 [Neisseria meningitidis M01-240013] gi|325203079|gb|ADY98533.1| ribosomal protein S2 [Neisseria meningitidis M01-240149] gi|325207002|gb|ADZ02455.1| ribosomal protein S2 [Neisseria meningitidis M04-240196] gi|325208952|gb|ADZ04404.1| ribosomal protein S2 [Neisseria meningitidis NZ-05/33] Length = 242 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + I Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAIRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|256824964|ref|YP_003148924.1| 30S ribosomal protein S2P [Kytococcus sedentarius DSM 20547] gi|256688357|gb|ACV06159.1| SSU ribosomal protein S2P [Kytococcus sedentarius DSM 20547] Length = 310 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 158/222 (71%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ L +A + + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLTYLNEAHEFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE--ELLN 124 G +LFV TK QA + + E A R VN +WLGGM+TN++TV + +++L++LE + + Sbjct: 65 GSVLFVGTKKQAQETIAEQATRVGMPYVNHRWLGGMLTNFQTVHKRLERLKELETIDFED 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N G TKKE L ++R+ DKL R L GIRDM P ++VVDT +E LA+ EAR+LRIP+ Sbjct: 125 VANSGRTKKELLVLKRELDKLDRTLGGIRDMSRTPSAVWVVDTKKEHLAVTEARKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A++DTN +PD VDY +PGNDD+ RS++L ++A AA +G+ Sbjct: 185 IAILDTNCDPDEVDYAVPGNDDAIRSVSLLTRIIADAAAEGL 226 >gi|197120704|ref|YP_002132655.1| 30S ribosomal protein S2 [Anaeromyxobacter sp. K] gi|209573728|sp|Q2IML9|RS2_ANADE RecName: Full=30S ribosomal protein S2 gi|238689904|sp|B4UMB8|RS2_ANASK RecName: Full=30S ribosomal protein S2 gi|196170553|gb|ACG71526.1| ribosomal protein S2 [Anaeromyxobacter sp. K] Length = 314 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 162/229 (70%), Gaps = 1/229 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV + + AL+ +SD+VA+ Sbjct: 12 ITMKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAK 71 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D + E A RS Q+ V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 72 GGSVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 131 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE +ER+R+KL++ L GI+++ LP +FV+DT +E +A+ EA RL IP+ Sbjct: 132 GTYERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDTKKEHIAVHEANRLGIPV 191 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 VAVVDTN +P+ +DYVIPGNDD+ RSI LF VA A I+G R +++ Sbjct: 192 VAVVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGKGRYSAWV 240 >gi|121635755|ref|YP_976000.1| 30S ribosomal protein S2 [Neisseria meningitidis FAM18] gi|313667570|ref|YP_004047854.1| 30S ribosomal protein S2 [Neisseria lactamica ST-640] gi|166225287|sp|A1KWH6|RS2_NEIMF RecName: Full=30S ribosomal protein S2 gi|120867461|emb|CAM11233.1| 30S ribosomal protein S2 [Neisseria meningitidis FAM18] gi|309379322|emb|CBX22095.1| 30S ribosomal protein S2 [Neisseria lactamica Y92-1009] gi|313005032|emb|CBN86464.1| 30S ribosomal protein S2 [Neisseria lactamica 020-06] gi|325131341|gb|EGC54052.1| ribosomal protein S2 [Neisseria meningitidis M6190] gi|325137370|gb|EGC59958.1| ribosomal protein S2 [Neisseria meningitidis ES14902] Length = 242 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|167624895|ref|YP_001675189.1| 30S ribosomal protein S2 [Shewanella halifaxensis HAW-EB4] gi|189044996|sp|B0TP83|RS2_SHEHH RecName: Full=30S ribosomal protein S2 gi|167354917|gb|ABZ77530.1| ribosomal protein S2 [Shewanella halifaxensis HAW-EB4] Length = 242 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 160/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMREMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+++L GI++M GLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD ++Y+IPGNDD+ RSI L+ VA+AA G Sbjct: 185 AVVDTNSSPDGINYIIPGNDDAMRSIRLYTGSVAAAAKAG 224 >gi|118469915|ref|YP_886856.1| 30S ribosomal protein S2 [Mycobacterium smegmatis str. MC2 155] gi|118171202|gb|ABK72098.1| ribosomal protein S2 [Mycobacterium smegmatis str. MC2 155] Length = 291 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 165/229 (72%), Gaps = 5/229 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 +A+ T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + Sbjct: 13 LAMAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVK 72 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 73 ETVAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE 132 Query: 121 ELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + ++ GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EA Sbjct: 133 AM--EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEA 190 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 R+L IP++A++DTN +PD+VDY IPGNDD+ RS AL ++ASA +G+ Sbjct: 191 RKLGIPVIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGL 239 >gi|258545338|ref|ZP_05705572.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826] gi|258519441|gb|EEV88300.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826] Length = 259 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 122/262 (46%), Positives = 168/262 (64%), Gaps = 7/262 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R+L E+G FGHR WNPKM YI+ +R + HII+L +TVPML AL + Sbjct: 1 MSKVSMRELFEAGAHFGHRTRFWNPKMAPYIYGKRGDIHIINLEKTVPMLNDALNFVGTV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ++FV TK AS+ V EAA R VN +WLGGMMTN+KT+ QSI +L +E + Sbjct: 61 VANGGSVMFVGTKRSASEAVGEAAARCGMPYVNFRWLGGMMTNFKTIRQSINRLEAIERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 Q KKE + + R+RDKL R+L GIR+M LPD++FV+D E +AIQEA++L Sbjct: 121 AEDGTFQKLVKKEVIVLGRERDKLARSLTGIRNMRRLPDVLFVIDVGHEHIAIQEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTNS + VDY+IPGNDDS R+I L+ D VASA + A + G + + A Sbjct: 181 IPVVGVVDTNSQLEGVDYIIPGNDDSVRAIRLYVDAVASAIEEAKASVTARGGENAEKAL 240 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 E E + ++E + +ES Sbjct: 241 E------EAVAVDEPATPAESG 256 >gi|15677921|ref|NP_275089.1| 30S ribosomal protein S2 [Neisseria meningitidis MC58] gi|218767332|ref|YP_002341844.1| 30S ribosomal protein S2 [Neisseria meningitidis Z2491] gi|54039453|sp|P66540|RS2_NEIMB RecName: Full=30S ribosomal protein S2 gi|54041954|sp|P66539|RS2_NEIMA RecName: Full=30S ribosomal protein S2 gi|7227364|gb|AAF42418.1| 30S ribosomal protein S2 [Neisseria meningitidis MC58] gi|121051340|emb|CAM07630.1| 30S ribosomal protein S2 [Neisseria meningitidis Z2491] gi|261393423|emb|CAX51060.1| 30S ribosomal protein S2 [Neisseria meningitidis 8013] gi|316983993|gb|EFV62972.1| ribosomal protein S2 [Neisseria meningitidis H44/76] gi|325127290|gb|EGC50226.1| ribosomal protein S2 [Neisseria meningitidis N1568] gi|325139420|gb|EGC61960.1| ribosomal protein S2 [Neisseria meningitidis CU385] gi|325141374|gb|EGC63857.1| ribosomal protein S2 [Neisseria meningitidis 961-5945] gi|325199189|gb|ADY94645.1| ribosomal protein S2 [Neisseria meningitidis G2136] gi|325205049|gb|ADZ00503.1| ribosomal protein S2 [Neisseria meningitidis M01-240355] Length = 242 Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|304388735|ref|ZP_07370793.1| 30S ribosomal protein S2 [Neisseria meningitidis ATCC 13091] gi|254671030|emb|CBA07848.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha153] gi|304337299|gb|EFM03475.1| 30S ribosomal protein S2 [Neisseria meningitidis ATCC 13091] Length = 253 Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + I Sbjct: 10 IKMSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAIR 69 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 70 RLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKT 129 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA + Sbjct: 130 AALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEK 189 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 190 LGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 235 >gi|296395047|ref|YP_003659931.1| 30S ribosomal protein S2 [Segniliparus rotundus DSM 44985] gi|296182194|gb|ADG99100.1| ribosomal protein S2 [Segniliparus rotundus DSM 44985] Length = 287 Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 116/237 (48%), Positives = 164/237 (69%), Gaps = 5/237 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTAIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A R VN +WLGGM+TN++TV + +Q+L++LE + ++ Sbjct: 65 GTILFVGTKKQAQEPIATEAARVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+ +KL R+L G+RDM LP ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFSGRTKKEILGLTREMNKLDRSLGGLRDMAKLPSALWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VA++DTN +PDLVDY IP NDD+ RS AL +VA+A DG+ ++ S G A Sbjct: 183 VVAILDTNCDPDLVDYPIPANDDAIRSAALLTRVVATAVADGLQQRASQRGGKGGEA 239 >gi|262202041|ref|YP_003273249.1| 30S ribosomal protein S2 [Gordonia bronchialis DSM 43247] gi|262085388|gb|ACY21356.1| ribosomal protein S2 [Gordonia bronchialis DSM 43247] Length = 272 Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 164/235 (69%), Gaps = 5/235 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELETM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAVWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 ++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + D+K Sbjct: 183 VIAILDTNCDPDLVDYPIPGNDDAIRSAALLTRVVASAVAEGVQARAGQASDDSK 237 >gi|308048669|ref|YP_003912235.1| 30S ribosomal protein S2P [Ferrimonas balearica DSM 9799] gi|307630859|gb|ADN75161.1| SSU ribosomal protein S2P [Ferrimonas balearica DSM 9799] Length = 242 Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM+ +AL + ++ Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEHTVPMMNEALAYLGGVASKN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A V EAA+ Q+ V+++WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAAGQAVREAAQSCDQFYVDNRWLGGMLTNWKTVRQSIKRLKDLEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ KL+++L GI+DMGGLPD +FV+D E +AI+EA L IP+V Sbjct: 125 TFEKLTKKEALMRSREMAKLEKSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTN+NPD VDY++PGNDD+ R+I L+ VA A +G Sbjct: 185 AIVDTNTNPDGVDYIVPGNDDAIRAIQLYTGAVAQAVKEG 224 >gi|111225139|ref|YP_715933.1| 30S ribosomal protein S2 [Frankia alni ACN14a] gi|111152671|emb|CAJ64412.1| 30S ribosomal protein S2 [Frankia alni ACN14a] Length = 286 Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 120/240 (50%), Positives = 165/240 (68%), Gaps = 5/240 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +TVA GG Sbjct: 1 MKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKETVAHGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ + Sbjct: 61 TVLFIGTKKQAQEAIEEQAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEIEVTGG 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+VA Sbjct: 121 TEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTK---SAGE 242 ++DTN +PD VDY IPGNDD+ RS AL +VA A DG+ AR + AD K SAGE Sbjct: 181 ILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASKAADAKPEQSAGE 240 >gi|258653279|ref|YP_003202435.1| 30S ribosomal protein S2 [Nakamurella multipartita DSM 44233] gi|258556504|gb|ACV79446.1| ribosomal protein S2 [Nakamurella multipartita DSM 44233] Length = 296 Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 115/230 (50%), Positives = 161/230 (70%), Gaps = 2/230 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+L++GV FGH+ WNPKM+R+IF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRQMLDAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLQYVDRAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G ILFV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L+DLE + + Sbjct: 65 GTILFVGTKRQAQEAIAEQATRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKDLEAMETSG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E +G TKKE L + R++DKL + L GIRDM +P +++VDT +E +A+ EAR+L IP+V Sbjct: 125 EFEGRTKKEVLLLTREKDKLAKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLNIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG 234 AV+DTN +PD VDY +PGNDD+ RS AL ++A A G IAR G Sbjct: 185 AVLDTNCDPDEVDYPVPGNDDAIRSAALLTKVIAEAVAAGLIARSGGAAG 234 >gi|268590532|ref|ZP_06124753.1| ribosomal protein S2 [Providencia rettgeri DSM 1131] gi|291314118|gb|EFE54571.1| ribosomal protein S2 [Providencia rettgeri DSM 1131] Length = 241 Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLE--VQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD +D+VIPGNDD+ R+I L+ VAS +G Sbjct: 183 VFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVASTVREG 224 >gi|149921519|ref|ZP_01909970.1| ribosomal protein S2 [Plesiocystis pacifica SIR-1] gi|149817594|gb|EDM77062.1| ribosomal protein S2 [Plesiocystis pacifica SIR-1] Length = 301 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 125/278 (44%), Positives = 171/278 (61%), Gaps = 8/278 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGHR WNPKM YIF RN HIIDL QT ++++A I A Sbjct: 20 ITVRQLLEAGVHFGHRTERWNPKMRTYIFGARNGVHIIDLQQTATLMRRAYAYIRSVAAE 79 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G ILFV TK QA D ++ A+R Q+ V ++WLGG +TNWKT+ QS+ KLR +E++ + Sbjct: 80 GQPILFVGTKRQAQDVLISEAQRCGQFFVVARWLGGTLTNWKTIRQSVDKLRHIEKMSED 139 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L ER R KL+R L GI+DM LP +FV+D NRE +A+ EA RL +P+ Sbjct: 140 GTYEKLTKKEVLQFERSRAKLERNLGGIKDMPKLPGAIFVIDPNREHIAVSEANRLGVPV 199 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHS--YMGADTKSA 240 VA+ DTN++P + Y+IPGNDD+ RSI L +A AA +G + +Q + + D A Sbjct: 200 VALADTNADPSKIQYIIPGNDDAIRSIKLITSRIADAAAEGNKLGKQRAVDHGDGDNAPA 259 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 V +G ++E S+ ++ L E A PE S Sbjct: 260 PIRVTTGGDGPKVELVSRRTQ---LPTPEAAATPETES 294 >gi|319639640|ref|ZP_07994387.1| 30S ribosomal protein S2 [Neisseria mucosa C102] gi|317399211|gb|EFV79885.1| 30S ribosomal protein S2 [Neisseria mucosa C102] Length = 242 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|241759080|ref|ZP_04757191.1| ribosomal protein S2 [Neisseria flavescens SK114] gi|261380648|ref|ZP_05985221.1| ribosomal protein S2 [Neisseria subflava NJ9703] gi|297250618|ref|ZP_06864669.2| ribosomal protein S2 [Neisseria polysaccharea ATCC 43768] gi|241320682|gb|EER56935.1| ribosomal protein S2 [Neisseria flavescens SK114] gi|284796629|gb|EFC51976.1| ribosomal protein S2 [Neisseria subflava NJ9703] gi|296838458|gb|EFH22396.1| ribosomal protein S2 [Neisseria polysaccharea ATCC 43768] Length = 242 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|206581012|ref|YP_002240343.1| ribosomal protein S2 [Klebsiella pneumoniae 342] gi|288937049|ref|YP_003441108.1| ribosomal protein S2 [Klebsiella variicola At-22] gi|290512470|ref|ZP_06551836.1| 30S ribosomal protein S2 [Klebsiella sp. 1_1_55] gi|238058198|sp|B5Y1K2|RS2_KLEP3 RecName: Full=30S ribosomal protein S2 gi|206570070|gb|ACI11846.1| ribosomal protein S2 [Klebsiella pneumoniae 342] gi|288891758|gb|ADC60076.1| ribosomal protein S2 [Klebsiella variicola At-22] gi|289774811|gb|EFD82813.1| 30S ribosomal protein S2 [Klebsiella sp. 1_1_55] Length = 241 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 224 >gi|115378600|ref|ZP_01465753.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] gi|310823277|ref|YP_003955635.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] gi|115364387|gb|EAU63469.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] gi|309396349|gb|ADO73808.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] Length = 333 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/233 (48%), Positives = 161/233 (69%), Gaps = 5/233 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV M + A + ++D +RG Sbjct: 39 TMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVVMARSAFRFVADITSRG 98 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A R+ Q+ V S+WLGG +TN+KT+ Q I +L+ LE++ E Sbjct: 99 GSVLFVGTKKQAQDVIREEAARAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKM--SE 156 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE ++ER+R+KL++ L G+++M LP +FV+D +E +AI EA RL IP Sbjct: 157 DGTFERLPKKEVASLEREREKLEKNLGGVKEMAKLPRCVFVIDPKKEHIAIHEATRLGIP 216 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 ++ VVDTN +PD +D+VIPGNDD+ RSI LF +A A ++G AR + AD Sbjct: 217 VIGVVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIADACLEGAARYRASGAAD 269 >gi|262372147|ref|ZP_06065426.1| ribosomal protein S2 [Acinetobacter junii SH205] gi|262312172|gb|EEY93257.1| ribosomal protein S2 [Acinetobacter junii SH205] Length = 250 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 112/243 (46%), Positives = 167/243 (68%), Gaps = 3/243 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ DKL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMDKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A I G ++++ A+ ++ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAG--KEYAQSQANAQA 238 Query: 240 AGE 242 G+ Sbjct: 239 KGD 241 >gi|254507883|ref|ZP_05120013.1| ribosomal protein S2 [Vibrio parahaemolyticus 16] gi|219549256|gb|EED26251.1| ribosomal protein S2 [Vibrio parahaemolyticus 16] Length = 242 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+DLE + Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAAASVTEG 224 >gi|170781202|ref|YP_001709534.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. sepedonicus] gi|189044930|sp|B0REP4|RS2_CLAMS RecName: Full=30S ribosomal protein S2 gi|169155770|emb|CAQ00891.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. sepedonicus] Length = 320 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/239 (47%), Positives = 166/239 (69%), Gaps = 1/239 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLL+ GV FGH WNPKM+R+IF ER+ +IIDL Q++ ++ KA + +TVA G Sbjct: 5 TIRQLLDCGVHFGHPKTRWNPKMKRFIFTERSGIYIIDLQQSLALIDKAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G ILFV TK QA + + E A+R Q VN +WLGG++TN++TV + + +L++L+ + + Sbjct: 65 GTILFVGTKKQAQESIAEQAQRVGQPYVNQRWLGGLLTNFQTVHKRLNRLKELDLVDFDD 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +GFTKKE L R+RDKL+++L GIR++ P M+VVDT +E LAI EAR+L IP++ Sbjct: 125 TTRGFTKKELLIQRRERDKLEKSLGGIRNLTKTPSAMWVVDTKKEHLAIDEARKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 ++DTN +PD V Y IPGNDD+ RS+AL ++A AA +G+ ++H A+ + E + Sbjct: 185 GILDTNCDPDEVQYPIPGNDDAIRSVALLTRIIADAAAEGLIQRHQKPDAEGSAPAEPL 243 >gi|15610027|ref|NP_217406.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Rv] gi|15842432|ref|NP_337469.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis CDC1551] gi|31794066|ref|NP_856559.1| 30S ribosomal protein S2 [Mycobacterium bovis AF2122/97] gi|121638771|ref|YP_978995.1| 30S ribosomal protein S2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662734|ref|YP_001284257.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Ra] gi|148824079|ref|YP_001288833.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis F11] gi|167969518|ref|ZP_02551795.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Ra] gi|215404864|ref|ZP_03417045.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis 02_1987] gi|215412732|ref|ZP_03421444.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis 94_M4241A] gi|215428331|ref|ZP_03426250.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T92] gi|215431837|ref|ZP_03429756.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis EAS054] gi|215447153|ref|ZP_03433905.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T85] gi|218754642|ref|ZP_03533438.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis GM 1503] gi|219558912|ref|ZP_03537988.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T17] gi|224991263|ref|YP_002645952.1| 30S ribosomal protein S2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253798022|ref|YP_003031023.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 1435] gi|254232985|ref|ZP_04926312.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis C] gi|254365530|ref|ZP_04981575.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis str. Haarlem] gi|254551961|ref|ZP_05142408.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187908|ref|ZP_05765382.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis CPHL_A] gi|260202023|ref|ZP_05769514.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T46] gi|260206206|ref|ZP_05773697.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis K85] gi|289444445|ref|ZP_06434189.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T46] gi|289448556|ref|ZP_06438300.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis CPHL_A] gi|289553321|ref|ZP_06442531.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 605] gi|289571080|ref|ZP_06451307.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T17] gi|289575595|ref|ZP_06455822.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis K85] gi|289746689|ref|ZP_06506067.1| ribosomal protein S2 [Mycobacterium tuberculosis 02_1987] gi|289751555|ref|ZP_06510933.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T92] gi|289755002|ref|ZP_06514380.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis EAS054] gi|289759011|ref|ZP_06518389.1| ribosomal protein S2 [Mycobacterium tuberculosis T85] gi|289763067|ref|ZP_06522445.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis GM 1503] gi|294994015|ref|ZP_06799706.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis 210] gi|297635507|ref|ZP_06953287.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis KZN 4207] gi|297732506|ref|ZP_06961624.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis KZN R506] gi|298526359|ref|ZP_07013768.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis 94_M4241A] gi|306777177|ref|ZP_07415514.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu001] gi|306781084|ref|ZP_07419421.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu002] gi|306785723|ref|ZP_07424045.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu003] gi|306789763|ref|ZP_07428085.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu004] gi|306794577|ref|ZP_07432879.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu005] gi|306798818|ref|ZP_07437120.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu006] gi|306804665|ref|ZP_07441333.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu008] gi|306808858|ref|ZP_07445526.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu007] gi|306968957|ref|ZP_07481618.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu009] gi|306973294|ref|ZP_07485955.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu010] gi|307081002|ref|ZP_07490172.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu011] gi|307085599|ref|ZP_07494712.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu012] gi|313659838|ref|ZP_07816718.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis KZN V2475] gi|54039452|sp|P66538|RS2_MYCBO RecName: Full=30S ribosomal protein S2 gi|54041953|sp|P66537|RS2_MYCTU RecName: Full=30S ribosomal protein S2 gi|1403411|emb|CAA98366.1| PROBABLE 30S RIBOSOMAL PROTEIN S2 RPSB [Mycobacterium tuberculosis H37Rv] gi|13882734|gb|AAK47283.1| ribosomal protein S2 [Mycobacterium tuberculosis CDC1551] gi|31619661|emb|CAD96601.1| PROBABLE 30S RIBOSOMAL PROTEIN S2 RPSB [Mycobacterium bovis AF2122/97] gi|121494419|emb|CAL72900.1| Probable 30S ribosomal protein S2 rpsB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124602044|gb|EAY61054.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis C] gi|134151043|gb|EBA43088.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis str. Haarlem] gi|148506886|gb|ABQ74695.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Ra] gi|148722606|gb|ABR07231.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis F11] gi|224774378|dbj|BAH27184.1| 30S ribosomal protein S2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319525|gb|ACT24128.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 1435] gi|289417364|gb|EFD14604.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T46] gi|289421514|gb|EFD18715.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis CPHL_A] gi|289437953|gb|EFD20446.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 605] gi|289540026|gb|EFD44604.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis K85] gi|289544834|gb|EFD48482.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T17] gi|289687217|gb|EFD54705.1| ribosomal protein S2 [Mycobacterium tuberculosis 02_1987] gi|289692142|gb|EFD59571.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T92] gi|289695589|gb|EFD63018.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis EAS054] gi|289710573|gb|EFD74589.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis GM 1503] gi|289714575|gb|EFD78587.1| ribosomal protein S2 [Mycobacterium tuberculosis T85] gi|298496153|gb|EFI31447.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis 94_M4241A] gi|308214461|gb|EFO73860.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu001] gi|308326072|gb|EFP14923.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu002] gi|308329636|gb|EFP18487.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu003] gi|308333775|gb|EFP22626.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu004] gi|308337169|gb|EFP26020.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu005] gi|308340936|gb|EFP29787.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu006] gi|308344812|gb|EFP33663.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu007] gi|308348760|gb|EFP37611.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu008] gi|308353461|gb|EFP42312.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu009] gi|308357326|gb|EFP46177.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu010] gi|308361210|gb|EFP50061.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu011] gi|308364906|gb|EFP53757.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu012] gi|323718500|gb|EGB27671.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis CDC1551A] gi|326904504|gb|EGE51437.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis W-148] gi|328457796|gb|AEB03219.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 4207] Length = 287 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 114/235 (48%), Positives = 164/235 (69%), Gaps = 5/235 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 ++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + AD K Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGK 237 >gi|28899092|ref|NP_798697.1| 30S ribosomal protein S2 [Vibrio parahaemolyticus RIMD 2210633] gi|153839721|ref|ZP_01992388.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ3810] gi|260361367|ref|ZP_05774432.1| ribosomal protein S2 [Vibrio parahaemolyticus K5030] gi|260876826|ref|ZP_05889181.1| ribosomal protein S2 [Vibrio parahaemolyticus AN-5034] gi|260895880|ref|ZP_05904376.1| ribosomal protein S2 [Vibrio parahaemolyticus Peru-466] gi|260900386|ref|ZP_05908781.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ4037] gi|31340375|sp|Q87MD8|RS2_VIBPA RecName: Full=30S ribosomal protein S2 gi|28807316|dbj|BAC60581.1| ribosomal protein S2 [Vibrio parahaemolyticus RIMD 2210633] gi|149746757|gb|EDM57745.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ3810] gi|308089355|gb|EFO39050.1| ribosomal protein S2 [Vibrio parahaemolyticus Peru-466] gi|308091373|gb|EFO41068.1| ribosomal protein S2 [Vibrio parahaemolyticus AN-5034] gi|308108613|gb|EFO46153.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ4037] gi|308113660|gb|EFO51200.1| ribosomal protein S2 [Vibrio parahaemolyticus K5030] gi|328474371|gb|EGF45176.1| 30S ribosomal protein S2 [Vibrio parahaemolyticus 10329] Length = 242 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 161/222 (72%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G Sbjct: 183 VYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEG 224 >gi|254804090|ref|YP_003082311.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha14] gi|254667632|emb|CBA03428.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha14] gi|319409593|emb|CBY89890.1| 30S ribosomal protein S2 [Neisseria meningitidis WUE 2594] Length = 253 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 10 IKMSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVR 69 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 70 RLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKT 129 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA + Sbjct: 130 AALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEK 189 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 190 LGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 235 >gi|262393519|ref|YP_003285373.1| 30S ribosomal protein S2p (SAe) [Vibrio sp. Ex25] gi|262337113|gb|ACY50908.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. Ex25] Length = 242 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G Sbjct: 185 AVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEG 224 >gi|253988125|ref|YP_003039481.1| 30S ribosomal protein S2 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779575|emb|CAQ82736.1| 30s ribosomal protein s2 [Photorhabdus asymbiotica] Length = 241 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V E+A+ QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKESAQSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALIRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 185 AVVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREG 224 >gi|323359722|ref|YP_004226118.1| ribosomal protein S2 [Microbacterium testaceum StLB037] gi|323276093|dbj|BAJ76238.1| ribosomal protein S2 [Microbacterium testaceum StLB037] Length = 327 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 111/232 (47%), Positives = 162/232 (69%), Gaps = 2/232 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLL+SGV FGH+ WNPK++R+I ER+ HIIDL Q++ + KA + + +TVA G Sbjct: 5 TIRQLLDSGVHFGHQTRRWNPKVKRFILTERSGIHIIDLQQSLGYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R Q VN +WLGG++TN++TVS+ + ++++LEEL N Sbjct: 65 GTILFVGTKKQAQEVLAEQATRVGQPYVNQRWLGGLLTNFQTVSKRLARMKELEELDYEN 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 GFTKKE L +R+ DKL ++L GIR++ P ++VVD RE LA+ EA++L IP+ Sbjct: 125 PAESGFTKKELLLKKRELDKLHKSLGGIRNLQKTPSAIWVVDAKREHLAVDEAKKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 + ++DTN++PD Y IPGNDD+ RS++L ++A AA +G+ ++H G D Sbjct: 185 IGILDTNADPDEFQYPIPGNDDAIRSVSLLTRIIADAAAEGLIQRHQPAGED 236 >gi|253996537|ref|YP_003048601.1| 30S ribosomal protein S2 [Methylotenera mobilis JLW8] gi|253983216|gb|ACT48074.1| ribosomal protein S2 [Methylotenera mobilis JLW8] Length = 245 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF +RN HI++L +T+PM + AL+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPMFEDALKHVRTLAANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GRILFV TK QA D V E A R+ VN +WLGGM+TN+KTV QSI++L+D E +L Sbjct: 64 GRILFVGTKRQARDIVKEEATRAGCAYVNHRWLGGMLTNFKTVKQSIKRLQDFEVMLQDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + F KKE L +R+ +KL+R++ GI++MGGLPD +F++D E AI EA +L IP++ Sbjct: 124 SLDKFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAITEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN++PD V YVIPGNDDSSR+I L+ +A A ++G Sbjct: 184 GVVDTNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEG 223 >gi|163750351|ref|ZP_02157591.1| 30S ribosomal protein S2 [Shewanella benthica KT99] gi|161329841|gb|EDQ00827.1| 30S ribosomal protein S2 [Shewanella benthica KT99] Length = 242 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + E+A QY V+ +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSIDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL R+L GI++MGGLPD++FV+ + E +A++EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELAKLDRSLGGIKNMGGLPDVLFVIGADHEHIAVKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNSNPD ++Y+IPGNDD+ RSI L+ + VA+A G Sbjct: 185 AIVDTNSNPDGINYIIPGNDDAMRSIRLYTESVAAAVKAG 224 >gi|54026102|ref|YP_120344.1| 30S ribosomal protein S2 [Nocardia farcinica IFM 10152] gi|61215421|sp|Q5YS61|RS2_NOCFA RecName: Full=30S ribosomal protein S2 gi|54017610|dbj|BAD58980.1| putative ribosomal protein S2 [Nocardia farcinica IFM 10152] Length = 285 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 117/242 (48%), Positives = 165/242 (68%), Gaps = 8/242 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+ +KL+R L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREMNKLERTLGGIRDMQKVPSAIWVVDTNKEHIAVGEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK---SA 240 ++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + D K A Sbjct: 183 VIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLASGDAKPEAGA 242 Query: 241 GE 242 GE Sbjct: 243 GE 244 >gi|238021544|ref|ZP_04601970.1| hypothetical protein GCWU000324_01444 [Kingella oralis ATCC 51147] gi|237866158|gb|EEP67200.1| hypothetical protein GCWU000324_01444 [Kingella oralis ATCC 51147] Length = 237 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 109/219 (49%), Positives = 161/219 (73%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A +V+ VA G Sbjct: 1 MRQMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQEVVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L + +L N E Sbjct: 61 TVLFVGTKRQAREIIKEEAQRAGMPYVDYRWLGGMLTNYKTVKQSIKRLEEKTAILANAE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + G+ KKE L++ R+ +KL+R+L GI++M GLPD +FV+DT + + EA +L IP++A Sbjct: 121 SSGYNKKELLDMTREVEKLERSLGGIKEMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVD+N++PDLV YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 VVDSNNSPDLVQYVIPGNDDSAKAIRLYCRGIADAVLEG 219 >gi|183597597|ref|ZP_02959090.1| hypothetical protein PROSTU_00879 [Providencia stuartii ATCC 25827] gi|188023093|gb|EDU61133.1| hypothetical protein PROSTU_00879 [Providencia stuartii ATCC 25827] Length = 241 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLE--VQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD +D+VIPGNDD+ R+I L+ VA++ +G Sbjct: 183 VFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLSAVATSVREG 224 >gi|291299704|ref|YP_003510982.1| 30S ribosomal protein S2 [Stackebrandtia nassauensis DSM 44728] gi|290568924|gb|ADD41889.1| ribosomal protein S2 [Stackebrandtia nassauensis DSM 44728] Length = 297 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 116/229 (50%), Positives = 162/229 (70%), Gaps = 3/229 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++RQLLESGV FGH+ WNPKM+R+I ERN ++IDL QT+ ++KA I +T Sbjct: 1 MPVVSMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYVIDLRQTLDYIEKAYGFIKNT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + E A+R VN +WLGGM+TN++T+ + +Q+L++LE L Sbjct: 61 VAEGGSIMFVGTKKQAQEAIAEQAQRVGMPYVNYRWLGGMLTNFQTMFKRLQRLKELEIL 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 N +G TKKE L + R++DKL R L G+RDM LP ++VVDT +E +A+ EAR+L Sbjct: 121 EQSGNAKEGRTKKELLQLMREKDKLARTLGGLRDMTKLPSAIWVVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IAR 228 IP+VA++DTN +PD V++ +PGNDD+ RS AL +VA A DG IAR Sbjct: 181 GIPVVAILDTNCDPDEVNFPVPGNDDAIRSAALLTRVVADAVADGLIAR 229 >gi|225077475|ref|ZP_03720674.1| hypothetical protein NEIFLAOT_02538 [Neisseria flavescens NRL30031/H210] gi|224951186|gb|EEG32395.1| hypothetical protein NEIFLAOT_02538 [Neisseria flavescens NRL30031/H210] gi|254673471|emb|CBA08858.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha275] Length = 253 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 10 IKMSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVR 69 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 70 RLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKT 129 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA + Sbjct: 130 AALENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEK 189 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 190 LGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 235 >gi|90413529|ref|ZP_01221520.1| 30S ribosomal protein S2 [Photobacterium profundum 3TCK] gi|90325461|gb|EAS41944.1| 30S ribosomal protein S2 [Photobacterium profundum 3TCK] Length = 242 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/214 (52%), Positives = 156/214 (72%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I+ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAEINKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + E+A QY VN++WLGGM+TNWKTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASESIKESAINCDQYYVNNRWLGGMLTNWKTVRQSIKRLKELEIQSADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI++MGGLPD MFV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +VVDTNSNPD VD+VIPGNDD+ RSI L+ VA Sbjct: 185 SVVDTNSNPDGVDFVIPGNDDAIRSIQLYTGAVA 218 >gi|91775883|ref|YP_545639.1| SSU ribosomal protein S2P [Methylobacillus flagellatus KT] gi|122985511|sp|Q1H139|RS2_METFK RecName: Full=30S ribosomal protein S2 gi|91709870|gb|ABE49798.1| SSU ribosomal protein S2P [Methylobacillus flagellatus KT] Length = 249 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM YIF ERN HII+L +T+P+ + AL+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRYWNPKMAPYIFGERNKIHIINLEKTLPLFEDALKYVRQLSANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GRILFV TK QA D + E A+R+ VN +WLGGM+TN+KTV QSI++L + E LL Sbjct: 64 GRILFVGTKRQARDIIKEEAQRAGCPYVNHRWLGGMLTNFKTVKQSIKRLTEYEALLQDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + F KKE L +R+ +KL+R++ GI++MGGLPD +F++D E A+ EA +L IP++ Sbjct: 124 GIEKFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAVTEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN++P+ V YVIPGNDDSSR+I L+ +A A ++G Sbjct: 184 GVVDTNNSPEGVAYVIPGNDDSSRAIRLYARGIADAVLEG 223 >gi|209573699|sp|A0QVB8|RS2_MYCS2 RecName: Full=30S ribosomal protein S2 Length = 277 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 111/223 (49%), Positives = 162/223 (72%), Gaps = 5/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++A++DTN +PD+VDY IPGNDD+ RS AL ++ASA +G+ Sbjct: 183 VIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGL 225 >gi|16759206|ref|NP_454823.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763606|ref|NP_459221.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140756|ref|NP_804098.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412489|ref|YP_149564.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161504666|ref|YP_001571778.1| 30S ribosomal protein S2 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|167990101|ref|ZP_02571201.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230523|ref|ZP_02655581.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168263917|ref|ZP_02685890.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464221|ref|ZP_02698124.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442333|ref|YP_002039456.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451227|ref|YP_002044206.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470466|ref|ZP_03076450.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735516|ref|YP_002113239.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249787|ref|YP_002145221.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265582|ref|ZP_03165656.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361424|ref|YP_002141060.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243582|ref|YP_002214177.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388369|ref|ZP_03214981.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204926698|ref|ZP_03217900.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205351553|ref|YP_002225354.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855734|ref|YP_002242385.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163139|ref|ZP_03348849.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425942|ref|ZP_03358692.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580798|ref|ZP_03362624.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609826|ref|ZP_03369652.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647836|ref|ZP_03377889.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852166|ref|ZP_03381698.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238911282|ref|ZP_04655119.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825715|ref|ZP_06544883.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54039454|sp|P66542|RS2_SALTI RecName: Full=30S ribosomal protein S2 gi|54041955|sp|P66541|RS2_SALTY RecName: Full=30S ribosomal protein S2 gi|61215385|sp|Q5PD63|RS2_SALPA RecName: Full=30S ribosomal protein S2 gi|189044999|sp|A9MPJ3|RS2_SALAR RecName: Full=30S ribosomal protein S2 gi|209573689|sp|A9N0R7|RS2_SALPB RecName: Full=30S ribosomal protein S2 gi|238689754|sp|B4TXS1|RS2_SALSV RecName: Full=30S ribosomal protein S2 gi|238689911|sp|B5BAM6|RS2_SALPK RecName: Full=30S ribosomal protein S2 gi|238690065|sp|B5F8T0|RS2_SALA4 RecName: Full=30S ribosomal protein S2 gi|238690312|sp|B5FJ16|RS2_SALDC RecName: Full=30S ribosomal protein S2 gi|238690451|sp|B5R3I2|RS2_SALEP RecName: Full=30S ribosomal protein S2 gi|238690550|sp|B5RHF4|RS2_SALG2 RecName: Full=30S ribosomal protein S2 gi|238690678|sp|B4TK44|RS2_SALHS RecName: Full=30S ribosomal protein S2 gi|238693522|sp|B4SUZ8|RS2_SALNS RecName: Full=30S ribosomal protein S2 gi|25294456|pir||AB0529 30S ribosomal protein S2 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418720|gb|AAL19180.1| 30S ribosomal subunit protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501497|emb|CAD08674.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi] gi|29136380|gb|AAO67947.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56126746|gb|AAV76252.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|160866013|gb|ABX22636.1| hypothetical protein SARI_02787 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|194400996|gb|ACF61218.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409531|gb|ACF69750.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456830|gb|EDX45669.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711018|gb|ACF90239.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632668|gb|EDX51122.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197092900|emb|CAR58329.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213490|gb|ACH50887.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243837|gb|EDY26457.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938098|gb|ACH75431.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605467|gb|EDZ04012.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323363|gb|EDZ08558.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271334|emb|CAR36127.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205331362|gb|EDZ18126.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335122|gb|EDZ21886.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205347496|gb|EDZ34127.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707537|emb|CAR31811.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261245448|emb|CBG23238.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267991906|gb|ACY86791.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156843|emb|CBW16319.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911186|dbj|BAJ35160.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084470|emb|CBY94263.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616040|gb|EFY12957.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620823|gb|EFY17683.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623826|gb|EFY20663.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627274|gb|EFY24065.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630581|gb|EFY27345.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638201|gb|EFY34902.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640686|gb|EFY37337.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645530|gb|EFY42057.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648176|gb|EFY44643.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322657127|gb|EFY53410.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657497|gb|EFY53769.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663817|gb|EFY60017.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666650|gb|EFY62828.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672192|gb|EFY68304.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676497|gb|EFY72568.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679411|gb|EFY75456.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686262|gb|EFY82246.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128536|gb|ADX15966.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193442|gb|EFZ78650.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197536|gb|EFZ82671.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201195|gb|EFZ86264.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209590|gb|EFZ94523.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323216463|gb|EGA01189.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223347|gb|EGA07682.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225908|gb|EGA10128.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228551|gb|EGA12680.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236836|gb|EGA20912.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239664|gb|EGA23711.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242289|gb|EGA26318.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249951|gb|EGA33847.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252381|gb|EGA36232.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255664|gb|EGA39417.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262899|gb|EGA46449.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265385|gb|EGA48881.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271828|gb|EGA55246.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326621920|gb|EGE28265.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626579|gb|EGE32922.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987168|gb|AEF06151.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 241 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 224 >gi|258620996|ref|ZP_05716030.1| 30S ribosomal protein S2 [Vibrio mimicus VM573] gi|258586384|gb|EEW11099.1| 30S ribosomal protein S2 [Vibrio mimicus VM573] Length = 289 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 48 MASVSMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 107 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 108 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 167 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 168 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 227 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + VA A +G Sbjct: 228 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEAINEG 271 >gi|304312448|ref|YP_003812046.1| 30S ribosomal protein S2 [gamma proteobacterium HdN1] gi|301798181|emb|CBL46403.1| 30S ribosomal protein S2 [gamma proteobacterium HdN1] Length = 250 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 116/241 (48%), Positives = 159/241 (65%), Gaps = 5/241 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R+L+++G FGH+ WNPKM++YIF RN HII+L TVP L AL I+ Sbjct: 1 MAQITMRELIKAGAHFGHQTRFWNPKMKQYIFGARNKIHIINLEHTVPALNDALNFINGQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 AR ++LFV TK AS + E A R+ VN +WLGGM+TNWKT+ QSI++LRDLE E Sbjct: 61 AARKNKVLFVGTKRAASTLIQEQATRAGMPYVNHRWLGGMLTNWKTIRQSIRRLRDLETE 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+R+ GI+DMGGLPD +FVVD E++AI EA +L Sbjct: 121 SKDGTFDKLTKKEALMRTRELEKLERSFGGIKDMGGLPDAIFVVDVMHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNS+PD VDYVIP NDD+ +++ L+ A+A ++G Y A AG Sbjct: 181 IPVIGIVDTNSDPDGVDYVIPANDDAIKAVELYVTAFANACLEG----REYAQAQAGGAG 236 Query: 242 E 242 + Sbjct: 237 D 237 >gi|257068195|ref|YP_003154450.1| 30S ribosomal protein S2P [Brachybacterium faecium DSM 4810] gi|256559013|gb|ACU84860.1| SSU ribosomal protein S2P [Brachybacterium faecium DSM 4810] Length = 318 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/227 (49%), Positives = 158/227 (69%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPK+ R+IF ERN +I+DL QT+ + KA + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKVRRFIFTERNGIYIVDLMQTLTYIDKAYDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN +TVS + +L++LE++ ++ Sbjct: 65 GTILFVGTKKQAQESVQEQATRVGMPYVNQRWLGGMLTNLQTVSARVNRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R++DKL++ L GIRDMG P ++VVDTN+E LA+ EA++L IP+ Sbjct: 125 VASSGRTKKELLMMRREKDKLEKTLGGIRDMGKAPSALWVVDTNKEHLAVDEAQKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN +PD + Y IPGNDD+ RS+ L ++A A G+ +H+ Sbjct: 185 VAILDTNCDPDEISYPIPGNDDAIRSVTLLTRVIADAVAAGLQERHA 231 >gi|62178786|ref|YP_215203.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505897|sp|Q57T39|RS2_SALCH RecName: Full=30S ribosomal protein S2 gi|62126419|gb|AAX64122.1| 30S ribosomal subunit protein S2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713240|gb|EFZ04811.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 241 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVREAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 224 >gi|254229485|ref|ZP_04922899.1| ribosomal protein S2 [Vibrio sp. Ex25] gi|151937950|gb|EDN56794.1| ribosomal protein S2 [Vibrio sp. Ex25] Length = 253 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ + Sbjct: 16 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKVGEKK 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE + + Sbjct: 76 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLETQSQDG 135 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 136 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 195 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G Sbjct: 196 AVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEG 235 >gi|156935316|ref|YP_001439232.1| 30S ribosomal protein S2 [Cronobacter sakazakii ATCC BAA-894] gi|260596589|ref|YP_003209160.1| 30S ribosomal protein S2 [Cronobacter turicensis z3032] gi|166225270|sp|A7MGT2|RS2_ENTS8 RecName: Full=30S ribosomal protein S2 gi|156533570|gb|ABU78396.1| hypothetical protein ESA_03173 [Cronobacter sakazakii ATCC BAA-894] gi|260215766|emb|CBA28177.1| 30S ribosomal protein S2 [Cronobacter turicensis z3032] Length = 241 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ + VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAVAATVREG 224 >gi|110834004|ref|YP_692863.1| 30S ribosomal protein S2 [Alcanivorax borkumensis SK2] gi|123050547|sp|Q0VQF7|RS2_ALCBS RecName: Full=30S ribosomal protein S2 gi|110647115|emb|CAL16591.1| 30S ribosomal protein S2 [Alcanivorax borkumensis SK2] Length = 252 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/233 (48%), Positives = 157/233 (67%), Gaps = 1/233 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R +L++GV FGH+ WNPKM YIF RN HII+L QT+P+ A+ ++ A Sbjct: 5 TMRDMLKAGVHFGHQTRYWNPKMNTYIFGARNKIHIINLEQTLPLFNDAMAFLNKLAASN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 +ILFV TK A V E A+R V+ +WLGGM+TNWKT+ QSI++ R+LE + + Sbjct: 65 NKILFVGTKRAAQKAVSEEAQRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRELEAQFQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L +R+ DKL+R++ GI+DMGGLPD +FV+D + E +A+QEAR+L IP+V Sbjct: 125 TFDKLTKKEALMRKREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIALQEARKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 AVVDTNSNPD VDYVIPGNDD+ R+I L+ A ++G + G +++ Sbjct: 185 AVVDTNSNPDGVDYVIPGNDDAIRAIQLYVKAAADVILEGKQYAQNQTGGESE 237 >gi|260772222|ref|ZP_05881138.1| SSU ribosomal protein S2p (SAe) [Vibrio metschnikovii CIP 69.14] gi|260611361|gb|EEX36564.1| SSU ribosomal protein S2p (SAe) [Vibrio metschnikovii CIP 69.14] Length = 242 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELVKIGDKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQATDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+++L GI+DMGGLPD +FV+D + E +A++EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMDKLEKSLGGIKDMGGLPDALFVIDADHEHIAVKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD +DY+IPGNDD+ R++ L+ + A + +G Sbjct: 185 AVVDTNSNPDGIDYIIPGNDDAIRAVQLYLNAAAESVNEG 224 >gi|15642258|ref|NP_231891.1| 30S ribosomal protein S2 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121729757|ref|ZP_01682196.1| ribosomal protein S2 [Vibrio cholerae V52] gi|147673418|ref|YP_001217775.1| 30S ribosomal protein S2 [Vibrio cholerae O395] gi|153217369|ref|ZP_01951120.1| ribosomal protein S2 [Vibrio cholerae 1587] gi|153803016|ref|ZP_01957602.1| ribosomal protein S2 [Vibrio cholerae MZO-3] gi|153823642|ref|ZP_01976309.1| ribosomal protein S2 [Vibrio cholerae B33] gi|153827572|ref|ZP_01980239.1| ribosomal protein S2 [Vibrio cholerae MZO-2] gi|153828232|ref|ZP_01980899.1| ribosomal protein S2 [Vibrio cholerae 623-39] gi|227082384|ref|YP_002810935.1| ribosomal protein S2 [Vibrio cholerae M66-2] gi|254286068|ref|ZP_04961029.1| ribosomal protein S2 [Vibrio cholerae AM-19226] gi|255747044|ref|ZP_05420989.1| SSU ribosomal protein S2p (SAe) [Vibrio cholera CIRS 101] gi|262161412|ref|ZP_06030522.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae INDRE 91/1] gi|262168261|ref|ZP_06035958.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC27] gi|25009223|sp|Q9KPV2|RS2_VIBCH RecName: Full=30S ribosomal protein S2 gi|172047607|sp|A5F607|RS2_VIBC3 RecName: Full=30S ribosomal protein S2 gi|254764499|sp|C3LQ32|RS2_VIBCM RecName: Full=30S ribosomal protein S2 gi|9656822|gb|AAF95404.1| ribosomal protein S2 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628508|gb|EAX60994.1| ribosomal protein S2 [Vibrio cholerae V52] gi|124113615|gb|EAY32435.1| ribosomal protein S2 [Vibrio cholerae 1587] gi|124121459|gb|EAY40202.1| ribosomal protein S2 [Vibrio cholerae MZO-3] gi|126518837|gb|EAZ76060.1| ribosomal protein S2 [Vibrio cholerae B33] gi|146315301|gb|ABQ19840.1| ribosomal protein S2 [Vibrio cholerae O395] gi|148876321|gb|EDL74456.1| ribosomal protein S2 [Vibrio cholerae 623-39] gi|149737952|gb|EDM52857.1| ribosomal protein S2 [Vibrio cholerae MZO-2] gi|150423978|gb|EDN15918.1| ribosomal protein S2 [Vibrio cholerae AM-19226] gi|227010272|gb|ACP06484.1| ribosomal protein S2 [Vibrio cholerae M66-2] gi|227014156|gb|ACP10366.1| ribosomal protein S2 [Vibrio cholerae O395] gi|255735446|gb|EET90846.1| SSU ribosomal protein S2p (SAe) [Vibrio cholera CIRS 101] gi|262023153|gb|EEY41857.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC27] gi|262028723|gb|EEY47377.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae INDRE 91/1] Length = 242 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 1 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A A +G Sbjct: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEG 224 >gi|317508976|ref|ZP_07966609.1| ribosomal protein S2 [Segniliparus rugosus ATCC BAA-974] gi|316252741|gb|EFV12178.1| ribosomal protein S2 [Segniliparus rugosus ATCC BAA-974] Length = 279 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 116/237 (48%), Positives = 165/237 (69%), Gaps = 5/237 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTSIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A R VN +WLGGM+TN++TV + +Q+L++LE + ++ Sbjct: 65 GTILFVGTKKQAQEPIATEALRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+ +KL R+L G+RDM LP ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFAGRTKKEILGLTREMNKLDRSLGGLRDMAKLPSALWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VA++DTN +PDLVDY IP NDD+ RS AL +VA+A DG+ ++ S G+ A Sbjct: 183 VVAILDTNCDPDLVDYPIPANDDAIRSAALLTRVVATAVADGLQQRSSQRGSQGGEA 239 >gi|323697433|ref|ZP_08109345.1| ribosomal protein S2 [Desulfovibrio sp. ND132] gi|323457365|gb|EGB13230.1| ribosomal protein S2 [Desulfovibrio desulfuricans ND132] Length = 263 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/227 (49%), Positives = 156/227 (68%), Gaps = 1/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++Q+LE+GV FGH+ WNPKM YIF RN HI+DL QTV M A I DTVA+G Sbjct: 5 TMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKMFATAHDFIVDTVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LF+ TK QA + V A+RS Y V +W+GG +TN++T+ +SI +L+ LE++ Sbjct: 65 GKVLFIGTKRQAQESVKAEAERSGMYYVTHRWMGGTLTNFQTIKKSIDRLKSLEQMFEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +TKKE + + R+ KL AL GI+DM P +FV+D RE++AIQE R+L IP+V Sbjct: 125 SISRYTKKEAVGMNREVKKLNLALGGIKDMTEAPQAVFVIDPKREQIAIQECRKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 AVVD+N +PD+VDY+IPGNDD+ R+I LF +A A ++G A Q Y Sbjct: 185 AVVDSNCDPDMVDYIIPGNDDAIRAIKLFATHMADACLEGGAMQKDY 231 >gi|317125399|ref|YP_004099511.1| 30S ribosomal protein S2P [Intrasporangium calvum DSM 43043] gi|315589487|gb|ADU48784.1| SSU ribosomal protein S2P [Intrasporangium calvum DSM 43043] Length = 342 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/227 (48%), Positives = 162/227 (71%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLTYINNAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL--N 124 G ILFV TK QA + V E A R VN +WLGGM+TN++T+S+ + +L++LEEL + Sbjct: 65 GTILFVGTKKQAQEPVAEQATRVGMPYVNHRWLGGMLTNFQTISKRLTRLKELEELNFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L ++R++DKL++ L GIR M +P +++VDT +E LA+ EAR+L +P+ Sbjct: 125 VAGSGYTKKELLILKREKDKLEKTLGGIRTMSKVPSAVWIVDTKKEHLAVDEARKLGLPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +A++DTN +PD VDY IPGNDD+ RS+AL ++A A +G+ ++ + Sbjct: 185 IAILDTNCDPDEVDYKIPGNDDAIRSVALLTRVIADAVAEGLVQRST 231 >gi|120555459|ref|YP_959810.1| 30S ribosomal protein S2 [Marinobacter aquaeolei VT8] gi|166225283|sp|A1U3Q4|RS2_MARAV RecName: Full=30S ribosomal protein S2 gi|120325308|gb|ABM19623.1| SSU ribosomal protein S2P [Marinobacter aquaeolei VT8] Length = 250 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 116/235 (49%), Positives = 159/235 (67%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM ++IF RN HII+L QTVP + +AL I Sbjct: 1 MAQVNMRDLLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNEALNFIQSL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK AS + E A+RS Q VN +WLGGM+TN+KT+ QSI++ RDLE + Sbjct: 61 AENKNKILFVGTKRAASKIIKEEAQRSGQPYVNHRWLGGMLTNYKTIRQSIRRYRDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+R++ GI+DMGGLPD +FV+D + E++AI+EA +L Sbjct: 121 SQDGTFDKLTKKEALERTREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+PD VDYVIPGNDD+ R+I ++ VA ++ A Q + GAD Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIQIYVKAVADTCLE--ASQSAGAGAD 233 >gi|237729475|ref|ZP_04559956.1| 30S ribosomal subunit protein S2 [Citrobacter sp. 30_2] gi|283835231|ref|ZP_06354972.1| ribosomal protein S2 [Citrobacter youngae ATCC 29220] gi|226909204|gb|EEH95122.1| 30S ribosomal subunit protein S2 [Citrobacter sp. 30_2] gi|291068942|gb|EFE07051.1| ribosomal protein S2 [Citrobacter youngae ATCC 29220] Length = 241 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVATTVREG 224 >gi|54297628|ref|YP_123997.1| 30S ribosomal protein S2 [Legionella pneumophila str. Paris] gi|148359249|ref|YP_001250456.1| 30S ribosomal protein S2 [Legionella pneumophila str. Corby] gi|296107294|ref|YP_003618994.1| small subunit ribosomal protein S2 [Legionella pneumophila 2300/99 Alcoy] gi|61215407|sp|Q5X4J7|RS2_LEGPA RecName: Full=30S ribosomal protein S2 gi|166225281|sp|A5ICL0|RS2_LEGPC RecName: Full=30S ribosomal protein S2 gi|53751413|emb|CAH12831.1| 30S ribosomal protein S2 [Legionella pneumophila str. Paris] gi|148281022|gb|ABQ55110.1| 30S ribosomal protein S2 [Legionella pneumophila str. Corby] gi|295649195|gb|ADG25042.1| small subunit ribosomal protein S2 [Legionella pneumophila 2300/99 Alcoy] Length = 254 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S A Sbjct: 5 SMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLNDVTNYVSRLAANK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK A D + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ KE Sbjct: 65 AKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM--KE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLRIP Sbjct: 123 KGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG Sbjct: 183 VIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDG 224 >gi|289645349|ref|ZP_06477336.1| ribosomal protein S2 [Frankia symbiont of Datisca glomerata] gi|289504841|gb|EFD25952.1| ribosomal protein S2 [Frankia symbiont of Datisca glomerata] Length = 305 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 119/242 (49%), Positives = 164/242 (67%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ + +A + +TVA G Sbjct: 5 TMKQLLESGVHFGHQTKRWNPKMKRFIFTERNGIYIIDLQQTLSYIDRAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G +LF+ TK QA + + E A+R V +WLGGM+TN+ TV + +Q+L++LEE+ L Sbjct: 65 GTVLFIGTKKQAQEAIEEQAQRVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEIELTG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+V Sbjct: 125 GTEVRTKKEQLVLSREKAKLERTLGGIRDMTRVPSAVWVVDTKKEHIAVGEARKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK----SA 240 A++DTN +PD VDY IPGNDD+ RS L +VA A DG +AR AD K S Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSATLLTRVVADAVADGLVARAGGTTSADVKPETPSG 244 Query: 241 GE 242 GE Sbjct: 245 GE 246 >gi|157376293|ref|YP_001474893.1| 30S ribosomal protein S2 [Shewanella sediminis HAW-EB3] gi|189044994|sp|A8FY42|RS2_SHESH RecName: Full=30S ribosomal protein S2 gi|157318667|gb|ABV37765.1| ribosomal protein S2 [Shewanella sediminis HAW-EB3] Length = 242 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 160/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + E+A Q+ V+ +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKESAISCEQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD ++Y++PGNDD+ RSI L+ VA+AA G Sbjct: 185 AVVDTNSSPDGINYIVPGNDDAMRSIRLYTQSVAAAAKAG 224 >gi|260775285|ref|ZP_05884182.1| SSU ribosomal protein S2p (SAe) [Vibrio coralliilyticus ATCC BAA-450] gi|260608466|gb|EEX34631.1| SSU ribosomal protein S2p (SAe) [Vibrio coralliilyticus ATCC BAA-450] Length = 242 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAVASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLEAQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +A++EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAVKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VD+VIPGNDD+ R++ L+ + ASA +G Sbjct: 185 AVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAAASAVTEG 224 >gi|308390199|gb|ADO32519.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha710] Length = 242 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/221 (49%), Positives = 157/221 (71%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + VA Sbjct: 4 ITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + L N Sbjct: 64 KGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALEN 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L IP+ Sbjct: 124 AAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 184 IAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|255067272|ref|ZP_05319127.1| ribosomal protein S2 [Neisseria sicca ATCC 29256] gi|255048423|gb|EET43887.1| ribosomal protein S2 [Neisseria sicca ATCC 29256] Length = 242 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|161723250|ref|YP_095741.2| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|61215426|sp|Q5ZUS8|RS2_LEGPH RecName: Full=30S ribosomal protein S2 Length = 254 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S A Sbjct: 5 SMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRLAANK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK A D + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ KE Sbjct: 65 AKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM--KE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLRIP Sbjct: 123 KGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG Sbjct: 183 VIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDG 224 >gi|283783953|ref|YP_003363818.1| 30S ribosomal protein S2 [Citrobacter rodentium ICC168] gi|282947407|emb|CBG86952.1| 30S ribosomal protein S2 [Citrobacter rodentium ICC168] Length = 241 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 224 >gi|54310084|ref|YP_131104.1| 30S ribosomal protein S2 [Photobacterium profundum SS9] gi|61215567|sp|Q6LN24|RS2_PHOPR RecName: Full=30S ribosomal protein S2 gi|46914523|emb|CAG21302.1| putative 30S ribosomal protein S2 [Photobacterium profundum SS9] Length = 242 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 113/214 (52%), Positives = 155/214 (72%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I+ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEINKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V E+A QY VN++WLGGM+TNWKTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASESVKESAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKELEIQSADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI++MGGLPD MFV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 ++VDTNSNPD VD+VIPGNDD+ RSI L+ VA Sbjct: 185 SIVDTNSNPDGVDFVIPGNDDAIRSIQLYTGAVA 218 >gi|325001879|ref|ZP_08122991.1| 30S ribosomal protein S2 [Pseudonocardia sp. P1] Length = 286 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 117/273 (42%), Positives = 178/273 (65%), Gaps = 5/273 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYEFVRETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L++LE + Sbjct: 65 GTIMFVGTKKQAQEAIAEEAGRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKELEAMEQTG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G TK+E L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L IP+V Sbjct: 125 GFEGRTKREILTLTREKDKLEKTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLNIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +++DTN +PD VD+ IPGNDD+ RS AL ++A AA DG+ + G +A + + Sbjct: 185 SILDTNCDPDEVDFPIPGNDDAIRSAALLTKVIAKAAADGLVSRGQRRGEGEAAAEQPLA 244 Query: 246 HSKE----GMQLEEDSQSSESSVLDGQEVAVVP 274 ++ G ++ D S ++ DG + A P Sbjct: 245 EWEQDVLAGNEVGSDGASLAAAGGDGADSAPAP 277 >gi|288575409|ref|ZP_05976922.2| ribosomal protein S2 [Neisseria mucosa ATCC 25996] gi|288568071|gb|EFC89631.1| ribosomal protein S2 [Neisseria mucosa ATCC 25996] Length = 242 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|331698490|ref|YP_004334729.1| 30S ribosomal protein S2 [Pseudonocardia dioxanivorans CB1190] gi|326953179|gb|AEA26876.1| ribosomal protein S2 [Pseudonocardia dioxanivorans CB1190] Length = 300 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 117/252 (46%), Positives = 172/252 (68%), Gaps = 2/252 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYEFVRETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L++LE + Sbjct: 65 GTIMFVGTKKQAQEAIAEEAGRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKELESMEQTG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E +A+ EAR+L IP+V Sbjct: 125 GFEGRTKKEILMLTREKDKLEKTLGGIRDMSKVPSAVWVVDTKKEHIAVGEARKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +++DTN +PD VD+ IPGNDD+ RS AL ++A AA DG+ + + G + G+ V Sbjct: 185 SILDTNCDPDEVDFPIPGNDDAIRSAALLTKVIARAAADGLMARSARSGGRDGAEGKPEV 244 Query: 246 HSKEGM-QLEED 256 S E + + E+D Sbjct: 245 GSDEPLPEWEQD 256 >gi|212710397|ref|ZP_03318525.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM 30120] gi|212686979|gb|EEB46507.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM 30120] Length = 241 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLE--VQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD +D+VIPGNDD+ R+I L+ VA+ +G Sbjct: 183 VFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVANTVREG 224 >gi|212636277|ref|YP_002312802.1| 30S ribosomal protein S2 [Shewanella piezotolerans WP3] gi|226697647|sp|B8CQ85|RS2_SHEPW RecName: Full=30S ribosomal protein S2 gi|212557761|gb|ACJ30215.1| Ribosomal protein S2 [Shewanella piezotolerans WP3] Length = 242 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 160/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSIDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++M GLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD ++Y+IPGNDD+ RSI L+ + VA+AA G Sbjct: 185 AVVDTNSSPDGINYIIPGNDDAMRSIRLYTESVATAAKAG 224 >gi|261378607|ref|ZP_05983180.1| ribosomal protein S2 [Neisseria cinerea ATCC 14685] gi|269144940|gb|EEZ71358.1| ribosomal protein S2 [Neisseria cinerea ATCC 14685] Length = 242 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|161870970|ref|YP_001600150.1| 30S ribosomal protein S2 [Neisseria meningitidis 053442] gi|189044946|sp|A9M489|RS2_NEIM0 RecName: Full=30S ribosomal protein S2 gi|161596523|gb|ABX74183.1| 30S ribosomal protein S2 [Neisseria meningitidis 053442] Length = 242 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + E +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVETEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|261211378|ref|ZP_05925666.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC341] gi|262404595|ref|ZP_06081150.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC586] gi|260839333|gb|EEX65959.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC341] gi|262349627|gb|EEY98765.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC586] Length = 241 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 1 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A++ +G Sbjct: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAASINEG 224 >gi|183981832|ref|YP_001850123.1| 30S ribosomal protein S2 RpsB [Mycobacterium marinum M] gi|183175158|gb|ACC40268.1| 30S ribosomal protein S2 RpsB [Mycobacterium marinum M] Length = 276 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 117/246 (47%), Positives = 170/246 (69%), Gaps = 9/246 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + GA + G+ Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGL---QARAGAG-RGDGKP 238 Query: 244 VVHSKE 249 VV + E Sbjct: 239 VVEAAE 244 >gi|224582064|ref|YP_002635862.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466591|gb|ACN44421.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|321222200|gb|EFX47272.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323212158|gb|EFZ96982.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] Length = 236 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 113/219 (51%), Positives = 157/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 219 >gi|119717467|ref|YP_924432.1| SSU ribosomal protein S2P [Nocardioides sp. JS614] gi|166225289|sp|A1SLR0|RS2_NOCSJ RecName: Full=30S ribosomal protein S2 gi|119538128|gb|ABL82745.1| SSU ribosomal protein S2P [Nocardioides sp. JS614] Length = 307 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 114/238 (47%), Positives = 164/238 (68%), Gaps = 3/238 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ + ++ + +TVA+G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLAYIDRSYAFVKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV Q I +L++L+E+ + Sbjct: 65 GTIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVHQRINRLKELDEIDFDD 124 Query: 127 NQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R+RDKL ++L GIR+M P +++VDTN+E LA++EAR+LRIPI Sbjct: 125 VAGSSRTKKELLQMRRERDKLNKSLGGIREMTRTPSAVWIVDTNKEHLAVEEARKLRIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAG 241 + ++D+N +PDLVD+ IPGNDD+ R++ L +VA A +G IAR G ++ G Sbjct: 185 IGILDSNCDPDLVDFPIPGNDDAIRAVGLLTRVVADAVAEGLIARSGVKAGEGAEAVG 242 >gi|293189845|ref|ZP_06608559.1| ribosomal protein S2 [Actinomyces odontolyticus F0309] gi|292821260|gb|EFF80205.1| ribosomal protein S2 [Actinomyces odontolyticus F0309] Length = 276 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/225 (51%), Positives = 159/225 (70%), Gaps = 3/225 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G +LFV TK QA + V E A+R VN +WLGGM+TN+ TV+ +Q+L++LE++ + Sbjct: 65 GTLLFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVATRLQRLKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+LRIPI Sbjct: 125 VASSGHTKKELLMMRREKDKLSRTLGGIRDMTKVPSAVWIVDPKKEHLAVSEARKLRIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IAR 228 VA++DTN++PD VDY IPGNDD+ R++AL ++A A +G IAR Sbjct: 185 VAILDTNADPDEVDYRIPGNDDAIRAVALLTRVIADAVAEGLIAR 229 >gi|186476096|ref|YP_001857566.1| 30S ribosomal protein S2 [Burkholderia phymatum STM815] gi|238691307|sp|B2JIC6|RS2_BURP8 RecName: Full=30S ribosomal protein S2 gi|184192555|gb|ACC70520.1| ribosomal protein S2 [Burkholderia phymatum STM815] Length = 250 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + EAA+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAEAAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDASKAVALYTQGVADAILEGRA 225 >gi|303247587|ref|ZP_07333858.1| ribosomal protein S2 [Desulfovibrio fructosovorans JJ] gi|302491067|gb|EFL50961.1| ribosomal protein S2 [Desulfovibrio fructosovorans JJ] Length = 266 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 111/227 (48%), Positives = 161/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM +IF RN HIIDL QTV + QKA ++ Sbjct: 1 MPYVTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVRLYQKAHDFVAGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG+++FV TK QA + V + A+R+ Q+ V ++W+GGM+TN++T+ +SI +L++LE + Sbjct: 61 VAGGGKVVFVGTKRQAQESVKKEAERAGQFFVTNRWMGGMLTNFQTIKKSIDRLKNLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE + + R+ +KL L GI+DM LP F++D RE++A+QE R+L Sbjct: 121 FGDGSIKRFPKKEIVMMGREVEKLNANLGGIKDMDKLPQAAFIIDPKREEIAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPIVAVVDTN +PD++DYVIPGNDD+ R+I LF VA A ++G A+ Sbjct: 181 IPIVAVVDTNCDPDVIDYVIPGNDDAIRAIKLFASTVAEACLEGAAQ 227 >gi|298370349|ref|ZP_06981665.1| ribosomal protein S2 [Neisseria sp. oral taxon 014 str. F0314] gi|298281809|gb|EFI23298.1| ribosomal protein S2 [Neisseria sp. oral taxon 014 str. F0314] Length = 242 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 158/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKME+YIF RN HI++L +T+PM +A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMEQYIFGARNKIHIVNLEKTLPMFLEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFGKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|261253728|ref|ZP_05946301.1| SSU ribosomal protein S2p (SAe) [Vibrio orientalis CIP 102891] gi|260937119|gb|EEX93108.1| SSU ribosomal protein S2p (SAe) [Vibrio orientalis CIP 102891] Length = 242 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + VA++ +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAVATSVTEG 224 >gi|91223473|ref|ZP_01258738.1| 30S ribosomal protein S2 [Vibrio alginolyticus 12G01] gi|91191559|gb|EAS77823.1| 30S ribosomal protein S2 [Vibrio alginolyticus 12G01] Length = 242 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G Sbjct: 185 AVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEG 224 >gi|294140003|ref|YP_003555981.1| 30S ribosomal protein S2 [Shewanella violacea DSS12] gi|293326472|dbj|BAJ01203.1| ribosomal protein S2 [Shewanella violacea DSS12] Length = 242 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 109/220 (49%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + E+A QY V+ +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL ++L GI++MGGLPD++F++ + E +A++EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELAKLDKSLGGIKNMGGLPDVLFIIGADHEHIAVKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD ++Y+IPGNDD+ RSI L+ + VA+AA G Sbjct: 185 AIVDTNSSPDGINYIIPGNDDAMRSIRLYTESVAAAAKSG 224 >gi|329118538|ref|ZP_08247242.1| 30S ribosomal protein S2 [Neisseria bacilliformis ATCC BAA-1200] gi|327465273|gb|EGF11554.1| 30S ribosomal protein S2 [Neisseria bacilliformis ATCC BAA-1200] Length = 287 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 161/224 (71%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ+LE+GV FGH+ WNPKM YIF RN HII+L +T+P+ Q+A + + Sbjct: 40 MSQITMRQMLEAGVHFGHQTRFWNPKMAPYIFGARNKIHIINLEKTLPLFQEAQEAVRRL 99 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 100 VAAKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKSAV 159 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N + G++KKE L++ R+ +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 160 LANADTSGYSKKELLDLTREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 219 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V +VIPGNDDS+++I L+C +A A ++G Sbjct: 220 IPVIAVVDTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEG 263 >gi|227529096|ref|ZP_03959145.1| ribosomal protein S2 [Lactobacillus vaginalis ATCC 49540] gi|227350940|gb|EEJ41231.1| ribosomal protein S2 [Lactobacillus vaginalis ATCC 49540] Length = 262 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 5/238 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D A G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDVAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ E Sbjct: 65 GVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L IP Sbjct: 123 DGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPKIPDVMFIVDPHKEQIAVKEAQKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IVA+VDTN++PD +DYVIP NDD+ R++ L +A A I+G Q AD A Sbjct: 183 IVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAVIEGKQGQDDNKQADANDAA 240 >gi|51597318|ref|YP_071509.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953] gi|108806515|ref|YP_650431.1| 30S ribosomal protein S2 [Yersinia pestis Antiqua] gi|108813117|ref|YP_648884.1| 30S ribosomal protein S2 [Yersinia pestis Nepal516] gi|145598951|ref|YP_001163027.1| 30S ribosomal protein S2 [Yersinia pestis Pestoides F] gi|149366955|ref|ZP_01888988.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125] gi|153947133|ref|YP_001399997.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758] gi|161484768|ref|NP_670436.2| 30S ribosomal protein S2 [Yersinia pestis KIM 10] gi|161511344|ref|NP_994114.2| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str. 91001] gi|162420294|ref|YP_001607772.1| 30S ribosomal protein S2 [Yersinia pestis Angola] gi|165927142|ref|ZP_02222974.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. F1991016] gi|166011898|ref|ZP_02232796.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211704|ref|ZP_02237739.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. B42003004] gi|167419541|ref|ZP_02311294.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425321|ref|ZP_02317074.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170023315|ref|YP_001719820.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis YPIII] gi|186896423|ref|YP_001873535.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+] gi|218928212|ref|YP_002346087.1| 30S ribosomal protein S2 [Yersinia pestis CO92] gi|229837751|ref|ZP_04457911.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A] gi|229840973|ref|ZP_04461132.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843074|ref|ZP_04463224.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. India 195] gi|229903559|ref|ZP_04518672.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516] gi|25009213|sp|Q8ZH66|RS2_YERPE RecName: Full=30S ribosomal protein S2 gi|61215491|sp|Q667I9|RS2_YERPS RecName: Full=30S ribosomal protein S2 gi|122979779|sp|Q1CAN6|RS2_YERPA RecName: Full=30S ribosomal protein S2 gi|122980004|sp|Q1CFE6|RS2_YERPN RecName: Full=30S ribosomal protein S2 gi|166226769|sp|A4TL92|RS2_YERPP RecName: Full=30S ribosomal protein S2 gi|167011240|sp|A7FFG9|RS2_YERP3 RecName: Full=30S ribosomal protein S2 gi|238687288|sp|A9R396|RS2_YERPG RecName: Full=30S ribosomal protein S2 gi|238688486|sp|B1JQG0|RS2_YERPY RecName: Full=30S ribosomal protein S2 gi|238691339|sp|B2JZ34|RS2_YERPB RecName: Full=30S ribosomal protein S2 gi|51590600|emb|CAH22241.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953] gi|108776765|gb|ABG19284.1| SSU ribosomal protein S2P [Yersinia pestis Nepal516] gi|108778428|gb|ABG12486.1| SSU ribosomal protein S2P [Yersinia pestis Antiqua] gi|115346823|emb|CAL19709.1| 30S ribosomal protein S2 [Yersinia pestis CO92] gi|145210647|gb|ABP40054.1| SSU ribosomal protein S2P [Yersinia pestis Pestoides F] gi|149290569|gb|EDM40645.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125] gi|152958628|gb|ABS46089.1| ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758] gi|162353109|gb|ABX87057.1| ribosomal protein S2 [Yersinia pestis Angola] gi|165921038|gb|EDR38262.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. F1991016] gi|165989164|gb|EDR41465.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001] gi|166207475|gb|EDR51955.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962282|gb|EDR58303.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055721|gb|EDR65505.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749849|gb|ACA67367.1| ribosomal protein S2 [Yersinia pseudotuberculosis YPIII] gi|186699449|gb|ACC90078.1| ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+] gi|229679329|gb|EEO75432.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516] gi|229689950|gb|EEO82009.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. India 195] gi|229697339|gb|EEO87386.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704128|gb|EEO91140.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A] gi|262361097|gb|ACY57818.1| 30S ribosomal protein S2 [Yersinia pestis D106004] gi|262365339|gb|ACY61896.1| 30S ribosomal protein S2 [Yersinia pestis D182038] gi|320014178|gb|ADV97749.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 241 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 159/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREG 224 >gi|294635118|ref|ZP_06713629.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685] gi|291091495|gb|EFE24056.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685] Length = 241 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 115/237 (48%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 ++VDTNS+PD VD+VIPGNDD+ R++ L+ VA A +G ++ + +T + E Sbjct: 185 SIVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREGRSQDLASQAEETMAEAE 241 >gi|238893165|ref|YP_002917899.1| 30S ribosomal protein S2 [Klebsiella pneumoniae NTUH-K2044] gi|262044760|ref|ZP_06017807.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330001647|ref|ZP_08304073.1| ribosomal protein S2 [Klebsiella sp. MS 92-3] gi|209573710|sp|A6T4X1|RS2_KLEP7 RecName: Full=30S ribosomal protein S2 gi|238545481|dbj|BAH61832.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037910|gb|EEW39134.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537589|gb|EGF63809.1| ribosomal protein S2 [Klebsiella sp. MS 92-3] Length = 241 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 224 >gi|261344736|ref|ZP_05972380.1| ribosomal protein S2 [Providencia rustigianii DSM 4541] gi|282567178|gb|EFB72713.1| ribosomal protein S2 [Providencia rustigianii DSM 4541] Length = 241 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELVKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD +D+VIPGNDD+ R+I L+ VA+ +G Sbjct: 183 VFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVANTVREG 224 >gi|315604536|ref|ZP_07879599.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 180 str. F0310] gi|315313548|gb|EFU61602.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 180 str. F0310] Length = 273 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 119/239 (49%), Positives = 162/239 (67%), Gaps = 3/239 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G +LFV TK QA + V E A+R VN +WLGGM+TN+ TV+ +Q+L++LE++ + Sbjct: 65 GTLLFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVATRLQRLKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+LRIPI Sbjct: 125 VAASGHTKKELLMMRREKDKLARTLGGIRDMTKVPSAVWIVDPKKEHLAVSEARKLRIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 VA++DTN++PD VDY IPGNDD+ R++AL +VA A +G IAR G ++ E Sbjct: 185 VAILDTNADPDEVDYRIPGNDDAIRAVALLTRVVADAVAEGLIARSDVRKGKGEETDAE 243 >gi|312194962|ref|YP_004015023.1| ribosomal protein S2 [Frankia sp. EuI1c] gi|311226298|gb|ADP79153.1| ribosomal protein S2 [Frankia sp. EuI1c] Length = 292 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 115/233 (49%), Positives = 158/233 (67%), Gaps = 1/233 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + +TV G Sbjct: 5 TMRQLLESGVHFGHQTKRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYDFVKETVGHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G +LF+ TK QA + V E A+R V +WLGGM+TN+ TV + +Q+L++LEE+ L Sbjct: 65 GTVLFIGTKKQAQEAVEEQARRVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEIELTG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+V Sbjct: 125 GTEVRTKKEQLVLSREKTKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLNIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 A++DTN +PD VDY IPGNDD+ RS AL +VA A G+ + AD K Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAAGLMSRAGASAADVK 237 >gi|154509158|ref|ZP_02044800.1| hypothetical protein ACTODO_01679 [Actinomyces odontolyticus ATCC 17982] gi|153798792|gb|EDN81212.1| hypothetical protein ACTODO_01679 [Actinomyces odontolyticus ATCC 17982] Length = 275 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/225 (51%), Positives = 159/225 (70%), Gaps = 3/225 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G +LFV TK QA + V E A+R VN +WLGGM+TN+ TV+ +Q+L++LE++ + Sbjct: 65 GTLLFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVATRLQRLKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+LRIPI Sbjct: 125 VASSGHTKKELLMMRREKDKLSRTLGGIRDMTKVPSAVWIVDPKKEHLAVSEARKLRIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IAR 228 VA++DTN++PD VDY IPGNDD+ R++AL ++A A +G IAR Sbjct: 185 VAILDTNADPDEVDYRIPGNDDAIRAVALLTRVIADAVAEGLIAR 229 >gi|312796244|ref|YP_004029166.1| SSU ribosomal protein S2P [Burkholderia rhizoxinica HKI 454] gi|312168019|emb|CBW75022.1| SSU ribosomal protein S2P [Burkholderia rhizoxinica HKI 454] Length = 274 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 30 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANR 89 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK Q+ D + E A R+ VN++WLGGM+TN+KT+ SI+KL+D+E + + Sbjct: 90 GTILFVGTKRQSRDTIAEEAARAGMPYVNNRWLGGMLTNFKTLKTSIKKLKDMEAAIESG 149 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FV+D K+A+ EA++L +P++ Sbjct: 150 EVEKMSKKEALMFEREMAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEAKKLGVPVI 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +PD VDYVIPGNDD+S+++ L+ VA A ++G A Sbjct: 210 AVVDTNHSPDGVDYVIPGNDDASKAVVLYAQGVADAILEGRA 251 >gi|293394701|ref|ZP_06638993.1| 30S ribosomal protein S2 [Serratia odorifera DSM 4582] gi|291422827|gb|EFE96064.1| 30S ribosomal protein S2 [Serratia odorifera DSM 4582] Length = 241 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 185 SIVDTNSDPDGVDFIIPGNDDAIRAVNLYLTAVAAAVREG 224 >gi|149195090|ref|ZP_01872182.1| 30S ribosomal protein S2 [Caminibacter mediatlanticus TB-2] gi|149134803|gb|EDM23287.1| 30S ribosomal protein S2 [Caminibacter mediatlanticus TB-2] Length = 274 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 114/219 (52%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ L+ A V+ D A G Sbjct: 1 MKDLLECGVHFGHQKRRWNPKMKKYIFGVRKNIYIIDLQKTLRHLKYACNVVRDAAAEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 ILFV TK QA D + E A+R VN +WLGGM+TN+KT+ +SI+KL +E++ + Sbjct: 61 TILFVGTKKQAVDAIKEHAERCGMPYVNHRWLGGMLTNFKTIQKSIRKLEIIEKMQESGQ 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKERL +ER+R KL+R L GIR+M +PD++F++DT +EK+A+QEA +L +PIVA Sbjct: 121 VNLLTKKERLILERRRAKLERVLGGIRNMKKIPDMLFIIDTVKEKIAVQEANKLGLPIVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VDTN +PDL+DY IPGNDD+ RS+ LFC +A A I+G Sbjct: 181 PVDTNCDPDLIDYPIPGNDDAIRSVNLFCKTMADAIIEG 219 >gi|229507666|ref|ZP_04397171.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae BX 330286] gi|229512139|ref|ZP_04401618.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae B33] gi|229513902|ref|ZP_04403364.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TMA 21] gi|229519274|ref|ZP_04408717.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC9] gi|229522206|ref|ZP_04411623.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TM 11079-80] gi|229524263|ref|ZP_04413668.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae bv. albensis VL426] gi|229528737|ref|ZP_04418127.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 12129(1)] gi|229607170|ref|YP_002877818.1| 30S ribosomal protein S2 [Vibrio cholerae MJ-1236] gi|254849390|ref|ZP_05238740.1| 30S ribosomal protein S2 [Vibrio cholerae MO10] gi|298500365|ref|ZP_07010170.1| SSU ribosomal protein S2 [Vibrio cholerae MAK 757] gi|229332511|gb|EEN97997.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 12129(1)] gi|229337844|gb|EEO02861.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae bv. albensis VL426] gi|229341131|gb|EEO06136.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TM 11079-80] gi|229343963|gb|EEO08938.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC9] gi|229349083|gb|EEO14040.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TMA 21] gi|229352104|gb|EEO17045.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae B33] gi|229355171|gb|EEO20092.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae BX 330286] gi|229369825|gb|ACQ60248.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae MJ-1236] gi|254845095|gb|EET23509.1| 30S ribosomal protein S2 [Vibrio cholerae MO10] gi|297541058|gb|EFH77112.1| SSU ribosomal protein S2 [Vibrio cholerae MAK 757] Length = 253 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 12 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 72 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 132 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A A +G Sbjct: 192 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEG 235 >gi|50119971|ref|YP_049138.1| 30S ribosomal protein S2 [Pectobacterium atrosepticum SCRI1043] gi|61215524|sp|Q6D8E3|RS2_ERWCT RecName: Full=30S ribosomal protein S2 gi|49610497|emb|CAG73942.1| 30S ribosomal protein S2 [Pectobacterium atrosepticum SCRI1043] Length = 241 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM AL + +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLENTVPMFNDALAELGKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V ++A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDSANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ DKL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELDKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + AVVDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G Sbjct: 183 VFAVVDTNSDPDGVDFIIPGNDDAIRAINLYLGAVATAVREG 224 >gi|296171502|ref|ZP_06852766.1| 30S ribosomal protein S2 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894064|gb|EFG73825.1| 30S ribosomal protein S2 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 277 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 114/239 (47%), Positives = 164/239 (68%), Gaps = 5/239 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 ++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K E Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEAE 241 >gi|52629053|gb|AAU27794.1| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 271 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 115/222 (51%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S A Sbjct: 22 SMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRLAANK 81 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK A D + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ KE Sbjct: 82 AKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM--KE 139 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLRIP Sbjct: 140 KGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG Sbjct: 200 VIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDG 241 >gi|237785752|ref|YP_002906457.1| 30S ribosomal protein S2 [Corynebacterium kroppenstedtii DSM 44385] gi|259494992|sp|C4LJA9|RS2_CORK4 RecName: Full=30S ribosomal protein S2 gi|237758664|gb|ACR17914.1| 30S ribosomal protein S2 [Corynebacterium kroppenstedtii DSM 44385] Length = 286 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/221 (50%), Positives = 157/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL++GV FGH+ WNPKM+RYI ERN +IIDL QT+ + A + + +TVA G Sbjct: 5 TMRQLLDAGVHFGHQTRRWNPKMKRYIITERNGIYIIDLQQTLTYIDSAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R VN +WLGGM+TN++TV + + +L++L+ + E Sbjct: 65 GNILFVGTKKQAQEAVATEAERVGMPYVNHRWLGGMLTNFQTVHKRLGRLKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N +G TKKE L + R+R KL+R L GI DM +P +++VDTN+E +A+ EA++L IP+ Sbjct: 125 NGYEGRTKKEVLMLTRERQKLERVLGGISDMNKVPSAIWIVDTNKEHIAVSEAQKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD+VDY IPGNDD+ RS AL ++ASA DG Sbjct: 185 VAILDTNCDPDVVDYPIPGNDDAIRSAALLTGVIASAVEDG 225 >gi|323495362|ref|ZP_08100440.1| 30S ribosomal protein S2 [Vibrio brasiliensis LMG 20546] gi|323310433|gb|EGA63619.1| 30S ribosomal protein S2 [Vibrio brasiliensis LMG 20546] Length = 242 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAATSVTEG 224 >gi|296101337|ref|YP_003611483.1| 30S ribosomal protein S2 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055796|gb|ADF60534.1| 30S ribosomal protein S2 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 241 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLSAVAATVREG 224 >gi|317493188|ref|ZP_07951611.1| ribosomal protein S2 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918848|gb|EFV40184.1| ribosomal protein S2 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 241 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELQKISARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTNS+PD VD+VIPGNDD+ R+++L+ + VA+ +G Sbjct: 185 SIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAVAATVREG 224 >gi|161486610|ref|NP_935350.2| 30S ribosomal protein S2 [Vibrio vulnificus YJ016] gi|161501817|ref|NP_760735.2| 30S ribosomal protein S2 [Vibrio vulnificus CMCP6] gi|320155592|ref|YP_004187971.1| 30S ribosomal protein S2p (SAe) [Vibrio vulnificus MO6-24/O] gi|31340388|sp|Q8DBG1|RS2_VIBVU RecName: Full=30S ribosomal protein S2 gi|56749445|sp|Q7MIG0|RS2_VIBVY RecName: Full=30S ribosomal protein S2 gi|319930904|gb|ADV85768.1| SSU ribosomal protein S2p (SAe) [Vibrio vulnificus MO6-24/O] gi|319999275|gb|AAO10262.2| ribosomal protein S2 [Vibrio vulnificus CMCP6] Length = 242 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELVKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEVQSTDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + AS+ +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASSLTEG 224 >gi|114777900|ref|ZP_01452814.1| ribosomal protein S2 [Mariprofundus ferrooxydans PV-1] gi|114551687|gb|EAU54239.1| ribosomal protein S2 [Mariprofundus ferrooxydans PV-1] Length = 252 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 118/253 (46%), Positives = 168/253 (66%), Gaps = 5/253 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YIF +RN HIIDL +T+ M +A + + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIFGKRNGIHIIDLQKTLRMANEAYTFMQELATAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA D + E A R+ Q+ +N +WLGG +TN+ TV QS++K++DL+ KE Sbjct: 61 RVLFVGTKRQARDAIKEEACRAGQFYINHRWLGGTLTNFATVQQSVRKMKDLQR--QKEE 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L ++R+ +KL+R+L GI++M LPD +FVVD +E+LAI+EA++L IP+ Sbjct: 119 GVFELLTKKEALQMQRELEKLERSLGGIKEMVNLPDCLFVVDVRKEELAIKEAQKLGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VAVVD+N NP +DY+IPGNDD+ R++ LFC +A A ++G H D E + Sbjct: 179 VAVVDSNCNPTGIDYIIPGNDDAIRAVRLFCSKIADALMEGAEAWHMENAEDGADLVEAM 238 Query: 245 VHSKEGMQLEEDS 257 S E EE++ Sbjct: 239 SVSVEETPSEEEA 251 >gi|86156701|ref|YP_463486.1| 30S ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-C] gi|85773212|gb|ABC80049.1| SSU ribosomal protein S2P [Anaeromyxobacter dehalogenans 2CP-C] Length = 301 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 111/227 (48%), Positives = 161/227 (70%), Gaps = 1/227 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV + + AL+ +SD+VA+GG Sbjct: 1 MKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LFV TK QA D + E A RS Q+ V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 61 SVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE +ER+R+KL++ L GI+++ LP +FV+DT +E +A+ EA RL IP+VA Sbjct: 121 YERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDTKKEHIAVHEANRLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 VVDTN +P+ +DYVIPGNDD+ RSI LF VA A I+G R +++ Sbjct: 181 VVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGKGRYSAWV 227 >gi|323497976|ref|ZP_08102985.1| 30S ribosomal protein S2 [Vibrio sinaloensis DSM 21326] gi|323317021|gb|EGA70023.1| 30S ribosomal protein S2 [Vibrio sinaloensis DSM 21326] Length = 242 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLEAQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAATSVSEG 224 >gi|78066798|ref|YP_369567.1| 30S ribosomal protein S2 [Burkholderia sp. 383] gi|107028801|ref|YP_625896.1| 30S ribosomal protein S2 [Burkholderia cenocepacia AU 1054] gi|116690040|ref|YP_835663.1| 30S ribosomal protein S2 [Burkholderia cenocepacia HI2424] gi|170733375|ref|YP_001765322.1| 30S ribosomal protein S2 [Burkholderia cenocepacia MC0-3] gi|123370089|sp|Q1BHI2|RS2_BURCA RecName: Full=30S ribosomal protein S2 gi|123728962|sp|Q39F43|RS2_BURS3 RecName: Full=30S ribosomal protein S2 gi|166225245|sp|A0K8E3|RS2_BURCH RecName: Full=30S ribosomal protein S2 gi|238688584|sp|B1JUF0|RS2_BURCC RecName: Full=30S ribosomal protein S2 gi|77967543|gb|ABB08923.1| SSU ribosomal protein S2P [Burkholderia sp. 383] gi|105897965|gb|ABF80923.1| SSU ribosomal protein S2P [Burkholderia cenocepacia AU 1054] gi|116648129|gb|ABK08770.1| SSU ribosomal protein S2P [Burkholderia cenocepacia HI2424] gi|169816617|gb|ACA91200.1| ribosomal protein S2 [Burkholderia cenocepacia MC0-3] Length = 246 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|91784119|ref|YP_559325.1| 30S ribosomal protein S2 [Burkholderia xenovorans LB400] gi|296158904|ref|ZP_06841732.1| ribosomal protein S2 [Burkholderia sp. Ch1-1] gi|123062774|sp|Q13XB6|RS2_BURXL RecName: Full=30S ribosomal protein S2 gi|91688073|gb|ABE31273.1| SSU ribosomal protein S2P [Burkholderia xenovorans LB400] gi|295890779|gb|EFG70569.1| ribosomal protein S2 [Burkholderia sp. Ch1-1] Length = 250 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + E A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 64 GTILFVGTKRQSRDTIAEEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L IP++ Sbjct: 124 ETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGRA 225 >gi|15827838|ref|NP_302101.1| 30S ribosomal protein S2 [Mycobacterium leprae TN] gi|221230315|ref|YP_002503731.1| 30S ribosomal protein S2 [Mycobacterium leprae Br4923] gi|3122831|sp|O33038|RS2_MYCLE RecName: Full=30S ribosomal protein S2 gi|2251179|emb|CAB10657.1| 30s ribosomal protein s2 [Mycobacterium leprae] gi|13093390|emb|CAC30549.1| 30S ribosomal protein S2 [Mycobacterium leprae] gi|219933422|emb|CAR71693.1| 30S ribosomal protein S2 [Mycobacterium leprae Br4923] Length = 277 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 114/241 (47%), Positives = 165/241 (68%), Gaps = 5/241 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVARG Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GLVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L +P Sbjct: 123 TGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGVP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A++DTN +PD VDY IPGNDD+ RS L ++ASA +G+ + D K E Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAELLTTVIASAVAEGLQVRAGLRCGDGKPETEA 242 Query: 244 V 244 V Sbjct: 243 V 243 >gi|258627350|ref|ZP_05722134.1| 30S ribosomal protein S2 [Vibrio mimicus VM603] gi|258580388|gb|EEW05353.1| 30S ribosomal protein S2 [Vibrio mimicus VM603] Length = 268 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 160/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+++IF RN +II+L +TVPM +AL ++ + Sbjct: 31 SMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVYIINLEKTVPMFNEALAELAKVGEKK 90 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + + Sbjct: 91 GKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDG 150 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 151 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 210 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD VDY+IPGNDD+ R++ L+ + VA A +G Sbjct: 211 AVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEAINEG 250 >gi|312883808|ref|ZP_07743527.1| 30S ribosomal protein S2 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368557|gb|EFP96090.1| 30S ribosomal protein S2 [Vibrio caribbenthicus ATCC BAA-2122] Length = 242 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALADLAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEGQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAAASVTEG 224 >gi|332532246|ref|ZP_08408127.1| 30S ribosomal protein S2 [Pseudoalteromonas haloplanktis ANT/505] gi|332038344|gb|EGI74789.1| 30S ribosomal protein S2 [Pseudoalteromonas haloplanktis ANT/505] Length = 242 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 115/224 (51%), Positives = 162/224 (72%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNDALKFLSSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A G++LFV TK ASD V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 AANKGKVLFVGTKRAASDAVKAAALESDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTNSNPD VDY++PGNDD+ R+++L+ VA+A +G Sbjct: 181 IPVVAIVDTNSNPDGVDYIVPGNDDAIRAVSLYTSAVAAAITEG 224 >gi|288549319|ref|ZP_05966691.2| hypothetical protein ENTCAN_05028 [Enterobacter cancerogenus ATCC 35316] gi|288318656|gb|EFC57594.1| ribosomal protein S2 [Enterobacter cancerogenus ATCC 35316] Length = 241 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+IL V TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILMVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+I+L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAISLYLGAVAATVREG 224 >gi|283851253|ref|ZP_06368536.1| ribosomal protein S2 [Desulfovibrio sp. FW1012B] gi|283573422|gb|EFC21399.1| ribosomal protein S2 [Desulfovibrio sp. FW1012B] Length = 273 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 110/227 (48%), Positives = 162/227 (71%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM +IF RN HIIDL QTV + QKA ++D Sbjct: 1 MPYVTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDYVADI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR++FV TK QA + V + A+R+ Q+ V ++W+GGM+TN++T+ +SI +L++LE + Sbjct: 61 VAGGGRVIFVGTKRQAQESVKKEAERAGQFFVTNRWMGGMLTNFQTIKKSIDRLKNLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE + + R+ +KL L GI++M LP F++D RE++A+QE R+L Sbjct: 121 FEDGSIKKFPKKEIVMMGREVEKLNATLGGIKNMDRLPQAAFIIDPKREEIAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPIVAVVDTN +PD++D+VIPGNDD+ R+I LF +A A ++G A+ Sbjct: 181 IPIVAVVDTNCDPDVIDHVIPGNDDAIRAIKLFATSIAEACLEGAAQ 227 >gi|158313013|ref|YP_001505521.1| ribosomal protein S2 [Frankia sp. EAN1pec] gi|158108418|gb|ABW10615.1| ribosomal protein S2 [Frankia sp. EAN1pec] Length = 300 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 112/221 (50%), Positives = 157/221 (71%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +TVA G Sbjct: 5 TMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G +LF+ TK QA + + E A+R V +WLGGM+TN+ TV + +Q+L++LEE+ L Sbjct: 65 GTVLFIGTKKQAQEAIEEQAQRVGMPFVKERWLGGMLTNFSTVYKRLQRLKELEEIELTG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+V Sbjct: 125 GTEVRTKKEQLVLTREKAKLERTLGGIRDMARVPSAVWVVDTKKEHIAVGEARKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A++DTN +PD VDY IPGNDD+ RS AL +VA A +G+ Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAEGL 225 >gi|194099757|ref|YP_002002892.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae NCCP11945] gi|240015553|ref|ZP_04722093.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA6140] gi|240114118|ref|ZP_04728608.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11] gi|240114643|ref|ZP_04728705.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18] gi|240116843|ref|ZP_04730905.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1] gi|240120181|ref|ZP_04733143.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID24-1] gi|240122478|ref|ZP_04735434.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332] gi|240126674|ref|ZP_04739560.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679] gi|240127188|ref|ZP_04739849.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035] gi|260441551|ref|ZP_05795367.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2] gi|193935047|gb|ACF30871.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae NCCP11945] Length = 237 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 109/219 (49%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + VA G Sbjct: 1 MRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + L N Sbjct: 61 TVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L IP++A Sbjct: 121 ESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 VVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 219 >gi|241662943|ref|YP_002981303.1| 30S ribosomal protein S2 [Ralstonia pickettii 12D] gi|309782137|ref|ZP_07676867.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA] gi|240864970|gb|ACS62631.1| ribosomal protein S2 [Ralstonia pickettii 12D] gi|308919203|gb|EFP64870.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA] Length = 247 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 158/224 (70%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM YIF RN HII+L +T+PM Q AL+ + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPMYQDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E + KE Sbjct: 64 GTILFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDME--VAKE 121 Query: 127 ---NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ DKL +++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGATETMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|54294597|ref|YP_127012.1| 30S ribosomal protein S2 [Legionella pneumophila str. Lens] gi|61215398|sp|Q5WVY7|RS2_LEGPL RecName: Full=30S ribosomal protein S2 gi|53754429|emb|CAH15913.1| 30S ribosomal protein S2 [Legionella pneumophila str. Lens] gi|307610409|emb|CBW99979.1| 30S ribosomal protein S2 [Legionella pneumophila 130b] Length = 254 Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S A Sbjct: 5 SMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRLAANK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK A D + E A+R V+ +WLGGM+TN+KTV QSI +L++L+E+ KE Sbjct: 65 AKILFVGTKRAAQDSIREHARRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM--KE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLRIP Sbjct: 123 KGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG Sbjct: 183 VIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDG 224 >gi|238763979|ref|ZP_04624935.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638] gi|238697796|gb|EEP90557.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638] Length = 241 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 158/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVTEG 224 >gi|238918773|ref|YP_002932287.1| 30S ribosomal protein S2 [Edwardsiella ictaluri 93-146] gi|238868341|gb|ACR68052.1| ribosomal protein S2, putative [Edwardsiella ictaluri 93-146] Length = 236 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 113/219 (51%), Positives = 155/219 (70%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL +S +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA + Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAALKCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ + Sbjct: 121 FDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA A +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREG 219 >gi|312139236|ref|YP_004006572.1| 30S ribosomal protein s2 rpsb [Rhodococcus equi 103S] gi|311888575|emb|CBH47887.1| 30S ribosomal protein S2 RpsB [Rhodococcus equi 103S] Length = 276 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 118/241 (48%), Positives = 163/241 (67%), Gaps = 6/241 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+ KL R L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSAGE 242 ++A++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ AR + D K Sbjct: 183 VIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGASADKDAKPEAG 242 Query: 243 T 243 T Sbjct: 243 T 243 >gi|85712038|ref|ZP_01043092.1| 30S ribosomal protein S2 [Idiomarina baltica OS145] gi|85694224|gb|EAQ32168.1| 30S ribosomal protein S2 [Idiomarina baltica OS145] Length = 242 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL + Sbjct: 1 MANVSMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNKIHIINLEKTVPMFNDALSYMQHV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK A++ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNKGKILFVGTKRAAAEPVKEAALNCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 TKKE L R+ +KL++ L GI++MGGLPD++FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP+V+VVDTNS+PD VDYVIPGNDD+ R++ L+ + A A Sbjct: 181 IPVVSVVDTNSDPDGVDYVIPGNDDAIRAVQLYLNAAADA 220 >gi|94967594|ref|YP_589642.1| 30S ribosomal protein S2 [Candidatus Koribacter versatilis Ellin345] gi|122986448|sp|Q1IU82|RS2_ACIBL RecName: Full=30S ribosomal protein S2 gi|94549644|gb|ABF39568.1| SSU ribosomal protein S2P [Candidatus Koribacter versatilis Ellin345] Length = 301 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 111/251 (44%), Positives = 170/251 (67%), Gaps = 3/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M ++A + +SD Sbjct: 1 MANITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVSDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D + E AKR + +N +WLGG++TNW TV +S+++L++L+E+ Sbjct: 61 AAEGKLVLFVGTKRQAQDAIAEEAKRCGMFYINQRWLGGLLTNWVTVQKSVKRLKELDEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +ER+R L+ L GI+++ LPD +FV+D+N+E++A++EAR+L Sbjct: 121 ATDGRYELLPKKEVIKLERERKHLQANLAGIKNLNRLPDCLFVIDSNKEQIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGADTKS 239 IP+VAVVDTN +P VDYVIPGNDD+ R+I LF +A + +G +A + + + Sbjct: 181 IPVVAVVDTNCDPSEVDYVIPGNDDALRAIRLFASKIADSVAEGSQLADKSMIESTNVSN 240 Query: 240 AGETVVHSKEG 250 A E + S G Sbjct: 241 AAEVIPQSYIG 251 >gi|332968335|gb|EGK07406.1| 30S ribosomal protein S2 [Kingella kingae ATCC 23330] Length = 241 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A +V+ Sbjct: 1 MSQVTMRQMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQEVVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 61 VANKGTVLFVGTKRQAREIIKEEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKSAV 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N E G KKE L++ R+ +KL+R+L GI+DM GLPD +FV+DT + + EA +L Sbjct: 121 LANGEASGRNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++AVVDTN++PD V +VIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEG 224 >gi|149374437|ref|ZP_01892211.1| ribosomal protein S2 [Marinobacter algicola DG893] gi|149361140|gb|EDM49590.1| ribosomal protein S2 [Marinobacter algicola DG893] Length = 250 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 115/235 (48%), Positives = 159/235 (67%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM ++IF RN HII+L QTVP + AL + + Sbjct: 1 MAQVNMRDLLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNDALNFVHNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK A+ + E A RS Q VN +WLGGM+TN+KT+ QSI++ RDLE + Sbjct: 61 AGNKNKILFVGTKRAAAKIIKEEALRSNQPYVNHRWLGGMLTNYKTIRQSIRRYRDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L+ R+ D+L+R++ GI+DMGGLPD MFV+D + E++AI+EA +L Sbjct: 121 SQDGTFDKLTKKEALDRTREMDRLERSIGGIKDMGGLPDAMFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+PD VDYVIPGNDD+ R+I ++ VA I+ A Q + GAD Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIQIYVQAVAETCIE--AAQSAGAGAD 233 >gi|325523570|gb|EGD01869.1| 30S ribosomal protein S2 [Burkholderia sp. TJI49] Length = 246 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+AI EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEATKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|253999120|ref|YP_003051183.1| 30S ribosomal protein S2 [Methylovorus sp. SIP3-4] gi|253985799|gb|ACT50656.1| ribosomal protein S2 [Methylovorus sp. SIP3-4] Length = 249 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF +RN HI++L +T+P+ + AL+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPLFEDALKYVRQLAANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GRILFV TK QA D + E A+R+ VN +WLGGM+TN+KTV QSI++L D E +L Sbjct: 64 GRILFVGTKRQARDIMKEEAERANCAYVNHRWLGGMLTNFKTVKQSIKRLNDYETMLQDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + F KKE L +R+ +KL+R++ GI++MGGLPD +F+VD E A+ EA +L IP++ Sbjct: 124 SLDKFGKKEALGYKREVEKLQRSIGGIKEMGGLPDAIFIVDVGHESGAVTEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN++PD V YVIPGNDDSSR+I L+ +A A ++G Sbjct: 184 GVVDTNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEG 223 >gi|238754807|ref|ZP_04616158.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473] gi|238706967|gb|EEP99333.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473] Length = 241 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 159/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNQALAELTKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKESANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLGAVATAVREG 224 >gi|91792911|ref|YP_562562.1| 30S ribosomal protein S2 [Shewanella denitrificans OS217] gi|123166215|sp|Q12NY7|RS2_SHEDO RecName: Full=30S ribosomal protein S2 gi|91714913|gb|ABE54839.1| SSU ribosomal protein S2P [Shewanella denitrificans OS217] Length = 242 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 TMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A + + E+A QY V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 65 GKVLFVGTKRAAGEAIKESALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G Sbjct: 185 AVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANSG 224 >gi|326333660|ref|ZP_08199897.1| ribosomal protein S2 [Nocardioidaceae bacterium Broad-1] gi|325948566|gb|EGD40669.1| ribosomal protein S2 [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 119/261 (45%), Positives = 171/261 (65%), Gaps = 13/261 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I +RN +IIDL Q++ + ++ I +TVA+G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTDRNGIYIIDLQQSLAYIDRSYAFIKETVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL--N 124 G I+FV TK QA + + E A R VN +WLGGM+TN++TV Q I +L++L+E+ + Sbjct: 65 GTIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFQTVHQRINRLKELDEVNFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L ++R+RDKL++ L GIR+MG P +++VDT +E LA++EAR+LRIPI Sbjct: 125 VAGSGRTKKELLQMKRERDKLEKTLGGIREMGRTPSAVWIVDTKKEHLAVEEARKLRIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 V ++DTN +PD VD+ IPGNDD+ R++ L +VA A +G+ +S G+T Sbjct: 185 VGILDTNCDPDEVDFPIPGNDDAIRAVGLLTRVVADAVAEGLI---------ARSGGKT- 234 Query: 245 VHSKEGMQLEEDSQSSESSVL 265 EG EE E +L Sbjct: 235 -EGTEGATAEEPLAEWERELL 254 >gi|269966251|ref|ZP_06180340.1| 30S ribosomal protein S2 [Vibrio alginolyticus 40B] gi|269829166|gb|EEZ83411.1| 30S ribosomal protein S2 [Vibrio alginolyticus 40B] Length = 253 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ + Sbjct: 16 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKVGEKK 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 76 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELETQSQDG 135 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 136 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 195 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G Sbjct: 196 AVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEG 235 >gi|171318106|ref|ZP_02907275.1| ribosomal protein S2 [Burkholderia ambifaria MEX-5] gi|171096730|gb|EDT41615.1| ribosomal protein S2 [Burkholderia ambifaria MEX-5] Length = 246 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FV+D K+A+ EA +L +P++ Sbjct: 124 ETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|108758377|ref|YP_633494.1| 30S ribosomal protein S2 [Myxococcus xanthus DK 1622] gi|122980824|sp|Q1D1H9|RS2_MYXXD RecName: Full=30S ribosomal protein S2 gi|108462257|gb|ABF87442.1| ribosomal protein S2 [Myxococcus xanthus DK 1622] Length = 312 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 111/231 (48%), Positives = 158/231 (68%), Gaps = 1/231 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV M + A + ++D ARG Sbjct: 8 TMRQLLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVVMARSAFRFVADITARG 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V E A R+ Q+ V S+WLGG +TN+KT+ Q I +L+ LE++ Sbjct: 68 GSVLFVGTKKQAQDVVREEASRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAEDG 127 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE +ER+R+KL++ L G+++M LP +FV+D +E +AI EA RL IP++ Sbjct: 128 TFERLPKKEVAQLEREREKLEKNLGGVKEMSKLPRCVFVIDPKKEHIAIHEAGRLGIPVI 187 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +VDTN +PD +D+VIPGNDD+ RSI LF +A A ++G AR + A+ Sbjct: 188 GLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAEACLEGAARYRASGAAE 238 >gi|152968763|ref|YP_001333872.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953612|gb|ABR75642.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 236 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 113/219 (51%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIAARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 219 >gi|37524673|ref|NP_928017.1| 30S ribosomal protein S2 [Photorhabdus luminescens subsp. laumondii TTO1] gi|61215677|sp|Q7N8P7|RS2_PHOLL RecName: Full=30S ribosomal protein S2 gi|36784098|emb|CAE12967.1| 30S ribosomal subunit protein S2 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 241 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA+ Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAAQNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALIRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 185 AVVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREG 224 >gi|77919517|ref|YP_357332.1| 30S ribosomal protein S2 [Pelobacter carbinolicus DSM 2380] gi|123743012|sp|Q3A395|RS2_PELCD RecName: Full=30S ribosomal protein S2 gi|77545600|gb|ABA89162.1| SSU ribosomal protein S2P [Pelobacter carbinolicus DSM 2380] Length = 267 Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 110/239 (46%), Positives = 167/239 (69%), Gaps = 1/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A Q I +T Sbjct: 1 MAQVSMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYQFIRET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFV TK QA + + E R+ Q+ ++++WLGGM+TN+ T+ +SI++L+ +E + Sbjct: 61 VQNGDKVLFVGTKKQAQEAIREETARADQFYIDNRWLGGMLTNFATIKKSIERLKKIEVM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE LN+ER+R+KL++ L GI+ M LP +FV+D +E +A++EAR+L Sbjct: 121 AQDGTYELLTKKEALNLEREREKLEKTLGGIKGMNKLPGAIFVIDPKKETIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +PD +DY+IPGNDD+ R+I LF +A A IDG + + + A++ A Sbjct: 181 IPVVAVVDTNCDPDDIDYIIPGNDDAIRAIRLFAAKMADACIDGAQAREAAIRAESDKA 239 >gi|262369542|ref|ZP_06062870.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046] gi|262315610|gb|EEY96649.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046] Length = 249 Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 111/239 (46%), Positives = 160/239 (66%), Gaps = 1/239 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAK 239 >gi|209573701|sp|A0PQ79|RS2_MYCUA RecName: Full=30S ribosomal protein S2 Length = 276 Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 116/246 (47%), Positives = 170/246 (69%), Gaps = 9/246 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF +KKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRSKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + GA + G+ Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGL---QARAGAG-RGDGKP 238 Query: 244 VVHSKE 249 VV + E Sbjct: 239 VVEAAE 244 >gi|288941758|ref|YP_003443998.1| 30S ribosomal protein S2 [Allochromatium vinosum DSM 180] gi|288897130|gb|ADC62966.1| ribosomal protein S2 [Allochromatium vinosum DSM 180] Length = 242 Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 109/233 (46%), Positives = 158/233 (67%), Gaps = 1/233 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM +IF +RN HI++L +T+P+ Q A+ + A GG Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMGAFIFGQRNKIHIVNLEKTLPLYQDAVNFMGTLAANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK A D + E A+R VN +WLGGM+TN+KT+ QS+++L+DLE + Sbjct: 61 KILFVGTKRAARDAIREEAERCGMPFVNHRWLGGMLTNFKTIRQSVKRLKDLEAMFESGT 120 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + F KKE L + R+RDKL+ +L GI++M GLPD +FV+D EK+A+ EA +L IP++ Sbjct: 121 IERFNKKEALGLSRERDKLELSLGGIKNMDGLPDALFVIDVGHEKIAVTEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 VVDTN++P VDYVIPGNDD+ R++ L+ A A +DG + + +G S Sbjct: 181 VVDTNNDPSNVDYVIPGNDDAIRAVRLYIAGAADAILDGRSTAAAMVGRGAGS 233 >gi|158320545|ref|YP_001513052.1| ribosomal protein S2 [Alkaliphilus oremlandii OhILAs] gi|167011231|sp|A8MHG9|RS2_ALKOO RecName: Full=30S ribosomal protein S2 gi|158140744|gb|ABW19056.1| ribosomal protein S2 [Alkaliphilus oremlandii OhILAs] Length = 232 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 111/223 (49%), Positives = 159/223 (71%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A V+ D Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMGEYIFTERNGIYIIDLQKTVKKVEEAYSVMKDIATE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + V E AKRS Y VN +WLGGM+TN+KT+ + I++LR+LE++ + Sbjct: 64 GGTILFVGTKKQAQEAVEEEAKRSGMYFVNQRWLGGMLTNFKTIKKRIERLRELEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + +++KL++ L GI+DM +PD +FVVD +E++AIQEA L I Sbjct: 122 EDGTFEVLPKKEVIKLRHEQEKLEKFLGGIKDMTEMPDALFVVDPRKERIAIQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++++VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G Sbjct: 182 PVISIVDTNCDPDEVDYVIPGNDDAIRAVKLIASTMANAIIEG 224 >gi|157147401|ref|YP_001454720.1| 30S ribosomal protein S2 [Citrobacter koseri ATCC BAA-895] gi|166225259|sp|A8ALC1|RS2_CITK8 RecName: Full=30S ribosomal protein S2 gi|157084606|gb|ABV14284.1| hypothetical protein CKO_03199 [Citrobacter koseri ATCC BAA-895] Length = 241 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 224 >gi|85059921|ref|YP_455623.1| 30S ribosomal protein S2 [Sodalis glossinidius str. 'morsitans'] gi|123766400|sp|Q2NRK7|RS2_SODGM RecName: Full=30S ribosomal protein S2 gi|84780441|dbj|BAE75218.1| 30S ribosomal protein S2 [Sodalis glossinidius str. 'morsitans'] Length = 241 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/220 (51%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVP+ AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPLFNDALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D E +AI EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDAEHEHIAINEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD++IPGNDD+ R+I L+ VA+ G Sbjct: 185 AIVDTNSDPDGVDFIIPGNDDAIRAINLYLTAVATTVRKG 224 >gi|41409054|ref|NP_961890.1| 30S ribosomal protein S2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464674|ref|YP_882916.1| 30S ribosomal protein S2 [Mycobacterium avium 104] gi|254776172|ref|ZP_05217688.1| 30S ribosomal protein S2 [Mycobacterium avium subsp. avium ATCC 25291] gi|61215644|sp|Q73VQ7|RS2_MYCPA RecName: Full=30S ribosomal protein S2 gi|41397413|gb|AAS05273.1| RpsB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165961|gb|ABK66858.1| ribosomal protein S2 [Mycobacterium avium 104] Length = 276 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 110/223 (49%), Positives = 160/223 (71%), Gaps = 5/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILGLTREKNKLERSLGGIRDMSKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGL 225 >gi|165939849|ref|ZP_02228389.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275] gi|167399959|ref|ZP_02305477.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|270487340|ref|ZP_06204414.1| ribosomal protein S2 [Yersinia pestis KIM D27] gi|21960060|gb|AAM86687.1|AE013914_7 30S ribosomal subunit protein S2 [Yersinia pestis KIM 10] gi|45437440|gb|AAS62991.1| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str. 91001] gi|165912252|gb|EDR30889.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275] gi|167050667|gb|EDR62075.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|270335844|gb|EFA46621.1| ribosomal protein S2 [Yersinia pestis KIM D27] Length = 269 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/228 (49%), Positives = 161/228 (70%), Gaps = 5/228 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 27 LIMATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELT 86 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 87 KISSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 146 Query: 121 ELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + ++ F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA Sbjct: 147 --IQSQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEA 204 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 205 NNLGIPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREG 252 >gi|317165239|gb|ADV08780.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae TCDC-NG08107] Length = 237 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 109/219 (49%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + VA G Sbjct: 1 MRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + L N Sbjct: 61 TVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L IP++A Sbjct: 121 ESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN++PD V YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 VVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEG 219 >gi|329893770|ref|ZP_08269858.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC3088] gi|328923493|gb|EGG30807.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC3088] Length = 249 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R+LL++G FGH+ WNPKM RYIF RN HII+L TVP L AL ++ Sbjct: 1 MTQVTMRELLQAGAHFGHQTRYWNPKMGRYIFGARNKIHIINLEHTVPALNDALAMVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + ++LFV TK A + E A+R+ CV+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 ASNKNKVLFVGTKRAAGKVIKEQAERAGMPCVSHRWLGGMLTNYKTIRASIKRLRDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+R++ GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 QADGTFAKLTKKEALMRTRQMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ +VDTNS+PD VDYVIPGNDD+ R++ L+ +A A I G Sbjct: 181 IPVIGIVDTNSDPDGVDYVIPGNDDAIRAVKLYAQAIADACIAG 224 >gi|120599552|ref|YP_964126.1| 30S ribosomal protein S2 [Shewanella sp. W3-18-1] gi|146292451|ref|YP_001182875.1| 30S ribosomal protein S2 [Shewanella putrefaciens CN-32] gi|166226754|sp|A4Y543|RS2_SHEPC RecName: Full=30S ribosomal protein S2 gi|166226756|sp|A1RLM7|RS2_SHESW RecName: Full=30S ribosomal protein S2 gi|120559645|gb|ABM25572.1| SSU ribosomal protein S2P [Shewanella sp. W3-18-1] gi|145564141|gb|ABP75076.1| SSU ribosomal protein S2P [Shewanella putrefaciens CN-32] gi|319425753|gb|ADV53827.1| ribosomal protein S2 [Shewanella putrefaciens 200] Length = 242 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A + + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 65 GKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G Sbjct: 185 AVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAAKAG 224 >gi|294503061|ref|YP_003567123.1| 30S ribosomal protein S2 [Yersinia pestis Z176003] gi|294353520|gb|ADE63861.1| 30S ribosomal protein S2 [Yersinia pestis Z176003] Length = 236 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/221 (51%), Positives = 158/221 (71%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 61 KILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQD 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ Sbjct: 119 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 179 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREG 219 >gi|37199490|dbj|BAC95321.1| ribosomal protein S2 [Vibrio vulnificus YJ016] Length = 253 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + + Sbjct: 16 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELVKVGEKK 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 76 GKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEVQSTDG 135 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 136 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 195 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + AS+ +G Sbjct: 196 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASSLTEG 235 >gi|238026902|ref|YP_002911133.1| 30S ribosomal protein S2 [Burkholderia glumae BGR1] gi|237876096|gb|ACR28429.1| Ribosomal protein S2 [Burkholderia glumae BGR1] Length = 246 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+AI EA +L +P++ Sbjct: 124 ETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|326382899|ref|ZP_08204589.1| 30S ribosomal protein S2 [Gordonia neofelifaecis NRRL B-59395] gi|326198489|gb|EGD55673.1| 30S ribosomal protein S2 [Gordonia neofelifaecis NRRL B-59395] Length = 272 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 112/240 (46%), Positives = 165/240 (68%), Gaps = 6/240 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q++++LE + ++ Sbjct: 65 GTILFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFNTVHKRLQRMKELETM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL+R L GIRDM +P +++VDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAVWIVDTNKEHIAVGEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SAGE 242 ++A++DTN +PD+VDY IP NDD+ RS AL ++ASA +G+ + D K AGE Sbjct: 183 VIAILDTNCDPDVVDYPIPANDDAIRSAALLTRVIASAVAEGVQARAGQTAGDAKPEAGE 242 >gi|238898429|ref|YP_002924110.1| 30S ribosomal subunit protein S2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495217|sp|C4K5W9|RS2_HAMD5 RecName: Full=30S ribosomal protein S2 gi|229466188|gb|ACQ67962.1| 30S ribosomal subunit protein S2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 241 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+GV FGH+ WNPKM+ ++F RN HII+L TV ML AL + AR Sbjct: 5 SMREMLEAGVHFGHKTRYWNPKMKPFVFGSRNGIHIINLEFTVTMLNNALSELRKISARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ + EAA AQ+ V+ +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAIKEAAGNCAQFFVHHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+D N E +A++EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELNKLENSLGGIKNMGGLPDALFVIDANHEHIAVKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTNS+PD +D++IPGNDD+ RSI L+ + V++A +G Sbjct: 185 SIVDTNSDPDGIDFIIPGNDDAIRSIKLYLNAVSAAISEG 224 >gi|311739714|ref|ZP_07713549.1| 30S ribosomal protein S2 [Corynebacterium pseudogenitalium ATCC 33035] gi|311305530|gb|EFQ81598.1| 30S ribosomal protein S2 [Corynebacterium pseudogenitalium ATCC 33035] Length = 277 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 114/245 (46%), Positives = 170/245 (69%), Gaps = 3/245 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + +E Sbjct: 65 GTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDERE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA +L IP+ Sbjct: 125 DGYKGRTKKEVLMLNRERAKLERVLGGISDMAKTPSALWIVDTNKEHIAVKEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G AR+ + A ++AG++ Sbjct: 185 VAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEAAGDS 244 Query: 244 VVHSK 248 K Sbjct: 245 AEKEK 249 >gi|262198482|ref|YP_003269691.1| ribosomal protein S2 [Haliangium ochraceum DSM 14365] gi|262081829|gb|ACY17798.1| ribosomal protein S2 [Haliangium ochraceum DSM 14365] Length = 291 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 155/224 (69%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE+GV FGH WNPKM YIF RN HI+DL QTV + ++A Q I D AR Sbjct: 15 ISLRALLEAGVHFGHNTGRWNPKMRPYIFGARNGIHIVDLQQTVTLFRQAFQAIIDVCAR 74 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++LFV TK QA+D + + A R+ Q+ V +WLGG +TN+KTV QS+ +L LE+L Sbjct: 75 GEKVLFVGTKKQAADVIRDEAARADQFHVTDRWLGGTLTNFKTVKQSLDRLARLEKL--- 131 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G +KKE++ I R++DKL ++L GI+ M LP +MFV+D +E +A+ EAR+L Sbjct: 132 EEDGTLYQLSKKEQIFIRREQDKLMKSLGGIKSMTKLPGMMFVIDPGKEHIAVAEARKLE 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+ DTN +PD+VD+VIPGNDD+ R+I LF +A AA+ G Sbjct: 192 IPVVAITDTNCDPDVVDFVIPGNDDAIRAIRLFASRIADAAVIG 235 >gi|83647917|ref|YP_436352.1| 30S ribosomal protein S2 [Hahella chejuensis KCTC 2396] gi|123739861|sp|Q2SBP7|RS2_HAHCH RecName: Full=30S ribosomal protein S2 gi|83635960|gb|ABC31927.1| ribosomal protein S2 [Hahella chejuensis KCTC 2396] Length = 253 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R LL++GV FGH+ WNPKM +YIF RN HII+L TVP L AL+ +S+ Sbjct: 1 MSEVSMRDLLKAGVHFGHQTRFWNPKMRKYIFGARNKIHIINLEHTVPALNDALRFVSNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + +ILFV TK A + E A R+ VN +WLGGM+TN+KT+ QSI++ RDLE + Sbjct: 61 AEKKNKILFVGTKRAAGKIIKEEADRANMPYVNHRWLGGMLTNYKTIRQSIRRYRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L + R+ DKL+R++ GI+DMGGLPD +FV+D + E++AI+EA +L Sbjct: 121 SQDGTFDKLTKKEVLMLNREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ VVDTNS+PD VDYVIPGNDD+ R+I ++ VA + + G++ Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIQVYAKAVADSCLHGLS 226 >gi|260907243|ref|ZP_05915565.1| ribosomal protein S2 [Brevibacterium linens BL2] Length = 326 Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 111/227 (48%), Positives = 162/227 (71%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL +++ + A + + +TV G Sbjct: 5 TIRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLGYIDTAFEFVKETVTHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + E AKR Q VN +WLGGM+TN++T+S +++L++LEE+ + Sbjct: 65 GSILFVGTKKQAQESIAEQAKRVGQPYVNQRWLGGMLTNFQTISLRLRRLKELEEIDFDD 124 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM P +++VDT +E LA+ EAR+L IP+ Sbjct: 125 VAGSSHTKKELLILRREKDKLEKTLGGIRDMQRTPSAVWIVDTKKEHLAVDEARKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +A++DTN +PD V+Y IPGNDD+ RS++L ++A A +G+ +HS Sbjct: 185 IAILDTNCDPDDVNYPIPGNDDAIRSVSLLTRVIADAVAEGLIARHS 231 >gi|24373197|ref|NP_717240.1| 30S ribosomal protein S2 [Shewanella oneidensis MR-1] gi|113970976|ref|YP_734769.1| 30S ribosomal protein S2 [Shewanella sp. MR-4] gi|114048200|ref|YP_738750.1| 30S ribosomal protein S2 [Shewanella sp. MR-7] gi|117921256|ref|YP_870448.1| 30S ribosomal protein S2 [Shewanella sp. ANA-3] gi|38258373|sp|Q8EGH5|RS2_SHEON RecName: Full=30S ribosomal protein S2 gi|122944527|sp|Q0HT62|RS2_SHESR RecName: Full=30S ribosomal protein S2 gi|123130243|sp|Q0HGV5|RS2_SHESM RecName: Full=30S ribosomal protein S2 gi|166226755|sp|A0KZ23|RS2_SHESA RecName: Full=30S ribosomal protein S2 gi|24347418|gb|AAN54684.1|AE015609_3 ribosomal protein S2 [Shewanella oneidensis MR-1] gi|113885660|gb|ABI39712.1| SSU ribosomal protein S2P [Shewanella sp. MR-4] gi|113889642|gb|ABI43693.1| SSU ribosomal protein S2P [Shewanella sp. MR-7] gi|117613588|gb|ABK49042.1| SSU ribosomal protein S2P [Shewanella sp. ANA-3] Length = 242 Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A + + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 65 GKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G Sbjct: 185 AVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAANAG 224 >gi|307330050|ref|ZP_07609201.1| ribosomal protein S2 [Streptomyces violaceusniger Tu 4113] gi|306884311|gb|EFN15346.1| ribosomal protein S2 [Streptomyces violaceusniger Tu 4113] Length = 325 Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 116/262 (44%), Positives = 176/262 (67%), Gaps = 9/262 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+LRIP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT---KSAG 241 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K+AG Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSGVATGDEKADKAAG 244 Query: 242 ETVVHSK----EGMQLEEDSQS 259 E + + EG + ED+++ Sbjct: 245 EPLAEWERDLLEGEKKAEDAEA 266 >gi|184201271|ref|YP_001855478.1| 30S ribosomal protein S2 [Kocuria rhizophila DC2201] gi|229890171|sp|B2GKT6|RS2_KOCRD RecName: Full=30S ribosomal protein S2 gi|183581501|dbj|BAG29972.1| 30S ribosomal protein S2 [Kocuria rhizophila DC2201] Length = 285 Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 110/231 (47%), Positives = 165/231 (71%), Gaps = 2/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQ+L++GV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + + T Sbjct: 1 MPVVTMRQMLDNGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLGFIDKAYEAVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN++TVS+ I ++++LEE+ Sbjct: 61 VAHGGTILFVGTKKQAQEAIAEQATRVGMPYVNHRWLGGMLTNFQTVSKRIDRMKELEEV 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+++KL+R L GIR++ P L+++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSQYTKKELLLLRREKEKLERTLGGIRNLTKTPSLIWIVDTKKEHLAVDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +PIVA++DTN +PD V + IPGNDDS RS++L +VA A +G+ ++H+ Sbjct: 181 GVPIVAILDTNCDPDEVAFPIPGNDDSIRSVSLLTRVVADAVAEGLMKRHN 231 >gi|299135610|ref|ZP_07028794.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX8] gi|298601734|gb|EFI57888.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX8] Length = 311 Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 120/283 (42%), Positives = 179/283 (63%), Gaps = 28/283 (9%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M + A + ++D Sbjct: 1 MASITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKDASKFVTDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D V E A R+ +NS+WLGG++TNW TV +S+++L++L+++ Sbjct: 61 TATGKLVLFVGTKRQAQDAVAEEATRAGMPYINSRWLGGLLTNWVTVQKSVKRLQELDDM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + +ER+R L L GI+ M LPD +FV+D+N E +A+ EAR+L Sbjct: 121 STDGRYELLTKKEVIKLERERKSLSTNLSGIKSMKRLPDAIFVIDSNNEAIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG---------------- 225 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A +A +G Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTTKIADSAYEGTQMISEKALSQEYADI 240 Query: 226 --IARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLD 266 IA + ++G D GE + +++E + S+E+SV D Sbjct: 241 QPIATESHFIGED----GEEIFG-----EIQESAGSAEASVED 274 >gi|254428035|ref|ZP_05041742.1| ribosomal protein S2 [Alcanivorax sp. DG881] gi|196194204|gb|EDX89163.1| ribosomal protein S2 [Alcanivorax sp. DG881] Length = 247 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/232 (48%), Positives = 156/232 (67%), Gaps = 1/232 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM YIF RN HII+L QT+P+ A+ ++ A Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMNAYIFGARNKIHIINLEQTLPLFNDAMAFLNKLAASNN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK A V E A+R V+ +WLGGM+TNWKT+ QSI++ R+LE + + Sbjct: 61 KILFVGTKRAAQKAVSEEAQRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRELEAQFQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L +R+ DKL+R++ GI+DMGGLPD +FV+D + E +A+QEAR+L IP+VA Sbjct: 121 FDKLTKKEALMRKREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIALQEARKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 VVDTNSNPD VDYVIPGNDD+ R+I L+ A ++G + G +++ Sbjct: 181 VVDTNSNPDGVDYVIPGNDDAIRAIQLYVKAAADVILEGKQYAQNQTGGESE 232 >gi|187924433|ref|YP_001896075.1| 30S ribosomal protein S2 [Burkholderia phytofirmans PsJN] gi|238689611|sp|B2T5J4|RS2_BURPP RecName: Full=30S ribosomal protein S2 gi|187715627|gb|ACD16851.1| ribosomal protein S2 [Burkholderia phytofirmans PsJN] Length = 250 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 156/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + E A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 64 GTILFVGTKRQSRDTIAEEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL +++ G++DMGG+PD +FVVD K+A+ EA +L IP++ Sbjct: 124 ETERMSKKEALLFEREMAKLVKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGRA 225 >gi|295098662|emb|CBK87752.1| SSU ribosomal protein S2P [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 236 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/219 (51%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVSLYLSAVAATVREG 219 >gi|15606996|ref|NP_214378.1| 30S ribosomal protein S2 [Aquifex aeolicus VF5] gi|7388166|sp|O67809|RS2_AQUAE RecName: Full=30S ribosomal protein S2 gi|2984239|gb|AAC07767.1| ribosomal protein S02 [Aquifex aeolicus VF5] Length = 274 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 117/256 (45%), Positives = 169/256 (66%), Gaps = 16/256 (6%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++++LLE+GV FGH WNPKM YI+ R+ HIIDL++T+ ML+ A +SD Sbjct: 1 MPVVSMKELLEAGVHFGHSKSRWNPKMAPYIYGVRHGIHIIDLNKTIVMLEDAYHFVSDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +A+GG ILFV TK QA D + E A+R + VN +W+GG++TN++TV +SI KL+ LE + Sbjct: 61 IAQGGEILFVGTKKQAKDIIKEEAERCGAFYVNERWVGGLLTNFQTVRKSIMKLQTLERM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE N+ RK +KL++ +GIRDM LPD++++VDT REK+A+ EAR Sbjct: 121 ---EEDGIFDVLPKKEVRNLRRKMEKLRKLYNGIRDMKKLPDVIWIVDTVREKIAVSEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IPIVA+ D+N +P ++DY IPGNDD+ +SI L +A A ++G R+ S Sbjct: 178 KLGIPIVAIADSNCDPTVIDYTIPGNDDAIKSIKLLTSKIADAVLEGKQRRES------- 230 Query: 239 SAGETVVHSKEGMQLE 254 E VV +KE +E Sbjct: 231 --AEEVVPTKERRPVE 244 >gi|238792755|ref|ZP_04636386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909] gi|238727863|gb|EEQ19386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909] Length = 241 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 159/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ + VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVATAVTEG 224 >gi|74316803|ref|YP_314543.1| 30S ribosomal protein S2P [Thiobacillus denitrificans ATCC 25259] gi|123773040|sp|Q3SKN9|RS2_THIDA RecName: Full=30S ribosomal protein S2 gi|74056298|gb|AAZ96738.1| Ribosomal protein S2 [Thiobacillus denitrificans ATCC 25259] Length = 248 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNP+M +IF RN HI++L +++PM Q+A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPRMAPFIFGHRNKIHIVNLEKSLPMFQEAQKFVRQLSANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK A D V E A+R+ V+ +WLGGM+TN+KTV QSI++L DLE + + Sbjct: 64 GNVLFVGTKRAARDIVREEAQRAGMPYVDQRWLGGMLTNFKTVKQSIKRLNDLEAQIAEP 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE L ++R+ DKL R+L GIR+MGGLPD +F++D +K A+ EA++L IP++ Sbjct: 124 GR-LSKKEILTVQREVDKLNRSLGGIREMGGLPDALFIIDVGYQKGAVVEAKKLGIPVIG 182 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 VVDTN++P+ VDYVIPGNDDS+R+I L+ +A AA++G A+ Sbjct: 183 VVDTNNSPEGVDYVIPGNDDSARAIRLYARGMADAALEGRAQ 224 >gi|163801779|ref|ZP_02195676.1| 30S ribosomal protein S2 [Vibrio sp. AND4] gi|159174287|gb|EDP59091.1| 30S ribosomal protein S2 [Vibrio sp. AND4] Length = 242 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF R+ HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARSRVHIINLEKTVPMFNEALAELAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++ E + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKEFEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRDMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEG 224 >gi|34497651|ref|NP_901866.1| 30S ribosomal protein S2 [Chromobacterium violaceum ATCC 12472] gi|61215687|sp|Q7NVZ4|RS2_CHRVO RecName: Full=30S ribosomal protein S2 gi|34103507|gb|AAQ59869.1| 30S ribosomal protein S2 [Chromobacterium violaceum ATCC 12472] Length = 243 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 159/226 (70%), Gaps = 3/226 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +YIF RN HII+L +T+P+ +A + + A Sbjct: 6 TMRQMLEAGVHFGHQTRFWNPKMAKYIFGSRNKIHIINLEKTLPLFVEAQEYVRRLAANK 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + V E A R V+ +WLGGM+TN+KTV QSI++L + +L Sbjct: 66 GTVMFVGTKRQAREIVREEAARCGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKRAILEGA 125 Query: 127 NQ-GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G+ KKE L+++R+ +KL+R+L GI+DM GLPD +FV+DT +K I EA++L IP++ Sbjct: 126 GETGYNKKELLDLQREVEKLERSLGGIKDMKGLPDAIFVIDTGYQKGTIVEAKKLGIPVI 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVDTN++PD +DYV+PGNDDSSR+I L+ +A A ++G R HS Sbjct: 186 GVVDTNNSPDGIDYVVPGNDDSSRAIRLYARGIADAVLEG--RAHS 229 >gi|320108210|ref|YP_004183800.1| 30S ribosomal protein S2 [Terriglobus saanensis SP1PR4] gi|319926731|gb|ADV83806.1| ribosomal protein S2 [Terriglobus saanensis SP1PR4] Length = 308 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 159/225 (70%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M ++A + ++D Sbjct: 1 MASITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVTDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA D + E A R+ +NS+WLGG++TNW TV +S+++L++L+E+ Sbjct: 61 TSSGKLILFVGTKRQAQDAIAEEATRAGMPYINSRWLGGLLTNWVTVQKSVKRLQELDEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + +ER+R L L GI+ M LPD +FVVD+N E +A+ EAR+L Sbjct: 121 STDGRYELLTKKEVIKLERERKSLATNLSGIKAMRRLPDAIFVVDSNNEAIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A +A +G+ Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTTKIADSAAEGV 225 >gi|307546394|ref|YP_003898873.1| 30S ribosomal protein S2 [Halomonas elongata DSM 2581] gi|307218418|emb|CBV43688.1| 30S ribosomal protein S2 [Halomonas elongata DSM 2581] Length = 248 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +R LL++G FGH+ WNPKM +YIF RN HII+L T+P L +A+ V+ Sbjct: 1 MAHVNMRDLLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEHTLPALNEAIDVVEKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK AS V E A R Q VN +WLGGM+TN+KT+ QSI++LR+LE + Sbjct: 61 AAANNKILFVGTKRSASKIVKEEANRVGQSFVNHRWLGGMLTNFKTIRQSIKRLRELETM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L R++DKL+R++ GI++MGGLPD +FV+D + E++AI EA + Sbjct: 121 --HEDGTFEKLTKKEVLMATREQDKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 L IP++ VVDTNS+PD VDYVIPGNDDS R+I ++ +A A Sbjct: 179 LGIPVIGVVDTNSDPDGVDYVIPGNDDSIRAIQIYVKAIADA 220 >gi|238784880|ref|ZP_04628880.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970] gi|238787235|ref|ZP_04631034.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641] gi|238714197|gb|EEQ06209.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970] gi|238724497|gb|EEQ16138.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641] Length = 241 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 158/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVNEG 224 >gi|30061726|ref|NP_835897.1| 30S ribosomal protein S2 [Shigella flexneri 2a str. 2457T] gi|56479617|ref|NP_706114.2| 30S ribosomal protein S2 [Shigella flexneri 2a str. 301] gi|61215761|sp|Q83SL4|RS2_SHIFL RecName: Full=30S ribosomal protein S2 gi|209573692|sp|Q0T840|RS2_SHIF8 RecName: Full=30S ribosomal protein S2 gi|30039968|gb|AAP15702.1| 30S ribosomal subunit protein S2 [Shigella flexneri 2a str. 2457T] gi|56383168|gb|AAN41821.2| 30S ribosomal subunit protein S2 [Shigella flexneri 2a str. 301] gi|313646772|gb|EFS11231.1| ribosomal protein S2 [Shigella flexneri 2a str. 2457T] gi|332762171|gb|EGJ92440.1| ribosomal protein S2 [Shigella flexneri 4343-70] gi|332765015|gb|EGJ95243.1| ribosomal protein S2 [Shigella flexneri K-671] gi|332768670|gb|EGJ98850.1| ribosomal protein S2 [Shigella flexneri 2930-71] gi|333010662|gb|EGK30095.1| ribosomal protein S2 [Shigella flexneri VA-6] Length = 241 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ V+R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIVSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 224 >gi|302537206|ref|ZP_07289548.1| ribosomal protein S2 [Streptomyces sp. C] gi|302446101|gb|EFL17917.1| ribosomal protein S2 [Streptomyces sp. C] Length = 292 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 163/240 (67%), Gaps = 2/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + Sbjct: 1 MAMAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 ETVAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELE 120 Query: 121 --ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR Sbjct: 121 AIDFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEAR 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D+K Sbjct: 181 KLHIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSK 240 >gi|161723148|ref|YP_442551.2| 30S ribosomal protein S2 [Burkholderia thailandensis E264] gi|167581478|ref|ZP_02374352.1| 30S ribosomal protein S2 [Burkholderia thailandensis TXDOH] gi|167619588|ref|ZP_02388219.1| 30S ribosomal protein S2 [Burkholderia thailandensis Bt4] gi|257138760|ref|ZP_05587022.1| 30S ribosomal protein S2 [Burkholderia thailandensis E264] gi|209573712|sp|Q2SWZ8|RS2_BURTA RecName: Full=30S ribosomal protein S2 Length = 246 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|146310371|ref|YP_001175445.1| 30S ribosomal protein S2 [Enterobacter sp. 638] gi|167011235|sp|A4W6R4|RS2_ENT38 RecName: Full=30S ribosomal protein S2 gi|145317247|gb|ABP59394.1| SSU ribosomal protein S2P [Enterobacter sp. 638] Length = 241 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 183 VFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 224 >gi|134296028|ref|YP_001119763.1| 30S ribosomal protein S2 [Burkholderia vietnamiensis G4] gi|166225251|sp|A4JF75|RS2_BURVG RecName: Full=30S ribosomal protein S2 gi|134139185|gb|ABO54928.1| SSU ribosomal protein S2P [Burkholderia vietnamiensis G4] Length = 246 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FV+D K+A+ EA +L +P++ Sbjct: 124 ETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRA 225 >gi|330817439|ref|YP_004361144.1| 30S ribosomal protein S2 [Burkholderia gladioli BSR3] gi|327369832|gb|AEA61188.1| 30S ribosomal protein S2 [Burkholderia gladioli BSR3] Length = 246 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLSANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVESG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+AI EA +L +P++ Sbjct: 124 ETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|167586855|ref|ZP_02379243.1| 30S ribosomal protein S2 [Burkholderia ubonensis Bu] Length = 247 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|189350815|ref|YP_001946443.1| 30S ribosomal protein S2 [Burkholderia multivorans ATCC 17616] gi|221198322|ref|ZP_03571368.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2M] gi|221208261|ref|ZP_03581265.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2] gi|221215457|ref|ZP_03588421.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD1] gi|189334837|dbj|BAG43907.1| small subunit ribosomal protein S2 [Burkholderia multivorans ATCC 17616] gi|221164641|gb|EED97123.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD1] gi|221171909|gb|EEE04352.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2] gi|221182254|gb|EEE14655.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2M] Length = 246 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRA 225 >gi|206560453|ref|YP_002231217.1| 30S ribosomal protein S2 [Burkholderia cenocepacia J2315] gi|238693110|sp|B4ECN1|RS2_BURCJ RecName: Full=30S ribosomal protein S2 gi|198036494|emb|CAR52391.1| 30S ribosomal protein S2 [Burkholderia cenocepacia J2315] Length = 246 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|333011006|gb|EGK30425.1| ribosomal protein S2 [Shigella flexneri K-272] gi|333021801|gb|EGK41050.1| ribosomal protein S2 [Shigella flexneri K-227] Length = 236 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 113/221 (51%), Positives = 158/221 (71%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ V+R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIVSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQD 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 119 GTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 179 FAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 219 >gi|302342177|ref|YP_003806706.1| ribosomal protein S2 [Desulfarculus baarsii DSM 2075] gi|301638790|gb|ADK84112.1| ribosomal protein S2 [Desulfarculus baarsii DSM 2075] Length = 273 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLE+GV FGH WNPKM YIF RN HI+DL +TV + + A + Sbjct: 1 MAYVTMRQLLEAGVHFGHHTGRWNPKMRGYIFGARNGIHIVDLQKTVKLFRDAYDAVVKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+RGG +LFV TK QA+D VME A+R Y VN +WLGGM+TN++T+ +SI + + LE + Sbjct: 61 VSRGGDVLFVGTKRQAADIVMEEARRCGMYYVNHRWLGGMLTNFQTIKKSIDRYKWLEGI 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + KKE + + R+ +KL+ L GI+DM LP ++F+VD +E++A+ EA+RL Sbjct: 121 IADGTIDNYPKKEAIGLRRELEKLELNLGGIKDMTRLPSVIFIVDIRKERIAVSEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP VA+VDTN +PD +DYVIPGNDD+ R+I L C VA A ++G+A Sbjct: 181 IPTVAIVDTNCDPDNIDYVIPGNDDAIRAIRLMCSKVAEATMEGLA 226 >gi|115352103|ref|YP_773942.1| 30S ribosomal protein S2 [Burkholderia ambifaria AMMD] gi|170699873|ref|ZP_02890903.1| ribosomal protein S2 [Burkholderia ambifaria IOP40-10] gi|172060967|ref|YP_001808619.1| 30S ribosomal protein S2 [Burkholderia ambifaria MC40-6] gi|122322840|sp|Q0BE15|RS2_BURCM RecName: Full=30S ribosomal protein S2 gi|238689164|sp|B1YS74|RS2_BURA4 RecName: Full=30S ribosomal protein S2 gi|115282091|gb|ABI87608.1| SSU ribosomal protein S2P [Burkholderia ambifaria AMMD] gi|170135195|gb|EDT03493.1| ribosomal protein S2 [Burkholderia ambifaria IOP40-10] gi|171993484|gb|ACB64403.1| ribosomal protein S2 [Burkholderia ambifaria MC40-6] Length = 246 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|123443485|ref|YP_001007458.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160592|ref|YP_004297169.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166226768|sp|A1JP82|RS2_YERE8 RecName: Full=30S ribosomal protein S2 gi|122090446|emb|CAL13314.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606930|emb|CBY28428.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica subsp. palearctica Y11] gi|325664822|gb|ADZ41466.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859599|emb|CBX69939.1| 30S ribosomal protein S2 [Yersinia enterocolitica W22703] Length = 241 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 158/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ + VA A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVADAVKEG 224 >gi|294649929|ref|ZP_06727321.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194] gi|292824158|gb|EFF82969.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194] Length = 282 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/240 (46%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 33 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 92 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 93 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 152 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 153 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 212 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 213 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 272 >gi|297156860|gb|ADI06572.1| 30S ribosomal protein S2 [Streptomyces bingchenggensis BCW-1] Length = 320 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 115/241 (47%), Positives = 168/241 (69%), Gaps = 5/241 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+LRIP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADT--KSAG 241 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR G + K+AG Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDEKAGKAAG 244 Query: 242 E 242 E Sbjct: 245 E 245 >gi|167837041|ref|ZP_02463924.1| 30S ribosomal protein S2 [Burkholderia thailandensis MSMB43] Length = 247 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 107/220 (48%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEG 223 >gi|311280862|ref|YP_003943093.1| ribosomal protein S2 [Enterobacter cloacae SCF1] gi|308750057|gb|ADO49809.1| ribosomal protein S2 [Enterobacter cloacae SCF1] Length = 241 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVATTVREG 224 >gi|187478228|ref|YP_786252.1| 30S ribosomal protein S2 [Bordetella avium 197N] gi|123766158|sp|Q2L162|RS2_BORA1 RecName: Full=30S ribosomal protein S2 gi|115422814|emb|CAJ49342.1| 30S ribosomal protein S2 [Bordetella avium 197N] Length = 249 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/219 (50%), Positives = 154/219 (70%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L QTV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK A + V A+R V+++WLGGM+TN+KTV SI++L+++E ++ + Sbjct: 64 NILFVGTKRAARELVATEAERCGMPFVDARWLGGMLTNFKTVKSSIKRLKEMEVMVADGS 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L +R+ DKL +A+ GI+DM GLPD +FV+D K+A+ EAR L IP+VA Sbjct: 124 VERLTKKEGLLFQRELDKLNKAIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +PD VDY+IPGNDDS+R+IAL+ +A A ++G Sbjct: 184 VVDTNHSPDGVDYIIPGNDDSARAIALYAKGIADAVLEG 222 >gi|297538503|ref|YP_003674272.1| 30S ribosomal protein S2 [Methylotenera sp. 301] gi|297257850|gb|ADI29695.1| ribosomal protein S2 [Methylotenera sp. 301] Length = 248 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R +LE+GV FGH+ WNPKM +IF +RN HI++L +T+PM + AL+ + A Sbjct: 4 TMRDMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPMFEDALKHVRTLAANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GRILFV TK QA D V E A R+ VN +WLGGM+TN+KTV QSI++L D E +L Sbjct: 64 GRILFVGTKRQARDIVKEEASRAGCAYVNHRWLGGMLTNFKTVKQSIKRLHDFEVMLEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + F KKE L +R+ +KL+R++ GI++MGGLPD +F++D E AI EA +L IP++ Sbjct: 124 SLEKFGKKEALGYKREIEKLERSIGGIKEMGGLPDAIFIIDVGHESGAITEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN++PD V +VIPGNDDSSR+I L+ +A A ++G Sbjct: 184 GIVDTNNSPDGVAFVIPGNDDSSRAIRLYARGIADAVLEG 223 >gi|254247883|ref|ZP_04941204.1| ribosomal protein S2 [Burkholderia cenocepacia PC184] gi|124872659|gb|EAY64375.1| ribosomal protein S2 [Burkholderia cenocepacia PC184] Length = 286 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 159/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 44 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANR 103 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + + Sbjct: 104 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESG 163 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 164 ETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 223 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 224 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 265 >gi|288922421|ref|ZP_06416609.1| ribosomal protein S2 [Frankia sp. EUN1f] gi|288346224|gb|EFC80565.1| ribosomal protein S2 [Frankia sp. EUN1f] Length = 305 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 112/221 (50%), Positives = 156/221 (70%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +TVA G Sbjct: 5 TMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ L Sbjct: 65 GTVLFIGTKKQAQEAIEEQALRVGMPFVKERWLGGMLTNFSTVYKRLQRLKELEEIELTG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+V Sbjct: 125 GTEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A++DTN +PD VDY IPGNDD+ RS AL +VA A +G+ Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAEGL 225 >gi|330445145|ref|ZP_08308797.1| ribosomal protein S2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489336|dbj|GAA03294.1| ribosomal protein S2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 242 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/214 (52%), Positives = 154/214 (71%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I AR Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAEIEKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + EAA QY VN++WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASESIKEAAVSCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQSTDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI++MGGLPD MFVV + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVVGADCEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 AVVDTN++PD VD+VIPGNDD+ R+I L+ VA Sbjct: 185 AVVDTNADPDGVDFVIPGNDDAIRAIQLYTGAVA 218 >gi|226366021|ref|YP_002783804.1| 30S ribosomal protein S2 [Rhodococcus opacus B4] gi|254764487|sp|C1B2U2|RS2_RHOOB RecName: Full=30S ribosomal protein S2 gi|226244511|dbj|BAH54859.1| 30S ribosomal protein S2 [Rhodococcus opacus B4] Length = 288 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 112/223 (50%), Positives = 156/223 (69%), Gaps = 5/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A R VN +WLGGM+TN+ TV + + +L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+ KL R L GIRDM +P ++VVDTN+E LA+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWVVDTNKEHLAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ Sbjct: 183 VIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGV 225 >gi|74310789|ref|YP_309208.1| 30S ribosomal protein S2 [Shigella sonnei Ss046] gi|82542768|ref|YP_406715.1| 30S ribosomal protein S2 [Shigella boydii Sb227] gi|157159281|ref|YP_001461338.1| 30S ribosomal protein S2 [Escherichia coli E24377A] gi|157159634|ref|YP_001456952.1| 30S ribosomal protein S2 [Escherichia coli HS] gi|187733810|ref|YP_001878970.1| 30S ribosomal protein S2 [Shigella boydii CDC 3083-94] gi|191166332|ref|ZP_03028164.1| ribosomal protein S2 [Escherichia coli B7A] gi|193063302|ref|ZP_03044393.1| ribosomal protein S2 [Escherichia coli E22] gi|193067626|ref|ZP_03048593.1| ribosomal protein S2 [Escherichia coli E110019] gi|194428264|ref|ZP_03060806.1| ribosomal protein S2 [Escherichia coli B171] gi|209917359|ref|YP_002291443.1| 30S ribosomal protein S2 [Escherichia coli SE11] gi|218552749|ref|YP_002385662.1| 30S ribosomal protein S2 [Escherichia coli IAI1] gi|218693634|ref|YP_002401301.1| 30S ribosomal protein S2 [Escherichia coli 55989] gi|256021601|ref|ZP_05435466.1| 30S ribosomal protein S2 [Shigella sp. D9] gi|260842401|ref|YP_003220179.1| 30S ribosomal subunit protein S2 [Escherichia coli O103:H2 str. 12009] gi|260853379|ref|YP_003227270.1| 30S ribosomal subunit protein S2 [Escherichia coli O26:H11 str. 11368] gi|260866318|ref|YP_003232720.1| 30S ribosomal subunit protein S2 [Escherichia coli O111:H- str. 11128] gi|293476826|ref|ZP_06665234.1| 30S ribosomal protein S2 [Escherichia coli B088] gi|300816209|ref|ZP_07096432.1| ribosomal protein S2 [Escherichia coli MS 107-1] gi|300824108|ref|ZP_07104228.1| ribosomal protein S2 [Escherichia coli MS 119-7] gi|300901988|ref|ZP_07120015.1| ribosomal protein S2 [Escherichia coli MS 84-1] gi|300923039|ref|ZP_07139106.1| ribosomal protein S2 [Escherichia coli MS 182-1] gi|301305305|ref|ZP_07211401.1| ribosomal protein S2 [Escherichia coli MS 124-1] gi|301330033|ref|ZP_07222717.1| ribosomal protein S2 [Escherichia coli MS 78-1] gi|307311384|ref|ZP_07591026.1| ribosomal protein S2 [Escherichia coli W] gi|309796346|ref|ZP_07690755.1| ribosomal protein S2 [Escherichia coli MS 145-7] gi|312970268|ref|ZP_07784450.1| ribosomal protein S2 [Escherichia coli 1827-70] gi|331666410|ref|ZP_08367291.1| ribosomal protein S2 [Escherichia coli TA271] gi|123728440|sp|Q325X1|RS2_SHIBS RecName: Full=30S ribosomal protein S2 gi|123732412|sp|Q3Z5I9|RS2_SHISS RecName: Full=30S ribosomal protein S2 gi|167011233|sp|A7ZHQ9|RS2_ECO24 RecName: Full=30S ribosomal protein S2 gi|167011234|sp|A7ZWB5|RS2_ECOHS RecName: Full=30S ribosomal protein S2 gi|226697641|sp|B7M1A9|RS2_ECO8A RecName: Full=30S ribosomal protein S2 gi|238058195|sp|B6HZE3|RS2_ECOSE RecName: Full=30S ribosomal protein S2 gi|238689499|sp|B2U311|RS2_SHIB3 RecName: Full=30S ribosomal protein S2 gi|254764476|sp|B7LGN0|RS2_ECO55 RecName: Full=30S ribosomal protein S2 gi|73854266|gb|AAZ86973.1| 30S ribosomal subunit protein S2 [Shigella sonnei Ss046] gi|81244179|gb|ABB64887.1| 30S ribosomal subunit protein S2 [Shigella boydii Sb227] gi|157065314|gb|ABV04569.1| ribosomal protein S2 [Escherichia coli HS] gi|157081311|gb|ABV21019.1| ribosomal protein S2 [Escherichia coli E24377A] gi|187430802|gb|ACD10076.1| ribosomal protein S2 [Shigella boydii CDC 3083-94] gi|190903583|gb|EDV63300.1| ribosomal protein S2 [Escherichia coli B7A] gi|192931210|gb|EDV83813.1| ribosomal protein S2 [Escherichia coli E22] gi|192959038|gb|EDV89474.1| ribosomal protein S2 [Escherichia coli E110019] gi|194413639|gb|EDX29919.1| ribosomal protein S2 [Escherichia coli B171] gi|209910618|dbj|BAG75692.1| 30S ribosomal protein S2 [Escherichia coli SE11] gi|218350366|emb|CAU96049.1| 30S ribosomal subunit protein S2 [Escherichia coli 55989] gi|218359517|emb|CAQ97055.1| 30S ribosomal subunit protein S2 [Escherichia coli IAI1] gi|257752028|dbj|BAI23530.1| 30S ribosomal subunit protein S2 [Escherichia coli O26:H11 str. 11368] gi|257757548|dbj|BAI29045.1| 30S ribosomal subunit protein S2 [Escherichia coli O103:H2 str. 12009] gi|257762674|dbj|BAI34169.1| 30S ribosomal subunit protein S2 [Escherichia coli O111:H- str. 11128] gi|291321279|gb|EFE60721.1| 30S ribosomal protein S2 [Escherichia coli B088] gi|300405874|gb|EFJ89412.1| ribosomal protein S2 [Escherichia coli MS 84-1] gi|300420666|gb|EFK03977.1| ribosomal protein S2 [Escherichia coli MS 182-1] gi|300523385|gb|EFK44454.1| ribosomal protein S2 [Escherichia coli MS 119-7] gi|300531416|gb|EFK52478.1| ribosomal protein S2 [Escherichia coli MS 107-1] gi|300839410|gb|EFK67170.1| ribosomal protein S2 [Escherichia coli MS 124-1] gi|300843944|gb|EFK71704.1| ribosomal protein S2 [Escherichia coli MS 78-1] gi|306908363|gb|EFN38861.1| ribosomal protein S2 [Escherichia coli W] gi|308120050|gb|EFO57312.1| ribosomal protein S2 [Escherichia coli MS 145-7] gi|310337766|gb|EFQ02877.1| ribosomal protein S2 [Escherichia coli 1827-70] gi|315059387|gb|ADT73714.1| 30S ribosomal subunit protein S2 [Escherichia coli W] gi|315254971|gb|EFU34939.1| ribosomal protein S2 [Escherichia coli MS 85-1] gi|320173351|gb|EFW48554.1| SSU ribosomal protein S2p (SAe) [Shigella dysenteriae CDC 74-1112] gi|320186589|gb|EFW61314.1| SSU ribosomal protein S2p (SAe) [Shigella flexneri CDC 796-83] gi|320200307|gb|EFW74893.1| SSU ribosomal protein S2p (SAe) [Escherichia coli EC4100B] gi|323157995|gb|EFZ44097.1| ribosomal protein S2 [Escherichia coli EPECa14] gi|323165869|gb|EFZ51651.1| ribosomal protein S2 [Shigella sonnei 53G] gi|323170959|gb|EFZ56608.1| ribosomal protein S2 [Escherichia coli LT-68] gi|323176482|gb|EFZ62074.1| ribosomal protein S2 [Escherichia coli 1180] gi|323181675|gb|EFZ67089.1| ribosomal protein S2 [Escherichia coli 1357] gi|323380054|gb|ADX52322.1| ribosomal protein S2 [Escherichia coli KO11] gi|323945643|gb|EGB41692.1| ribosomal protein S2 [Escherichia coli H120] gi|324017824|gb|EGB87043.1| ribosomal protein S2 [Escherichia coli MS 117-3] gi|324118288|gb|EGC12183.1| ribosomal protein S2 [Escherichia coli E1167] gi|331066621|gb|EGI38498.1| ribosomal protein S2 [Escherichia coli TA271] gi|332098797|gb|EGJ03757.1| ribosomal protein S2 [Shigella boydii 3594-74] Length = 241 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 224 >gi|311898625|dbj|BAJ31033.1| putative ribosomal protein S2 [Kitasatospora setae KM-6054] Length = 299 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 110/235 (46%), Positives = 161/235 (68%), Gaps = 2/235 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLNYIDRAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++L E+ + Sbjct: 65 GSVLFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELGEIDFTD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L ++R+ DKL++ L GIRDM +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAGSGLTKKELLVLQREYDKLEKTLGGIRDMQRVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K+ Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLKSRAGVAKGDAKA 239 >gi|258406061|ref|YP_003198803.1| 30S ribosomal protein S2 [Desulfohalobium retbaense DSM 5692] gi|257798288|gb|ACV69225.1| ribosomal protein S2 [Desulfohalobium retbaense DSM 5692] Length = 262 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/223 (50%), Positives = 155/223 (69%), Gaps = 1/223 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++Q+LE+GV FGH+ WNPKM +IF R HIIDL QTV + ++A VI D VA GG Sbjct: 6 MKQMLETGVHFGHQTRRWNPKMRPFIFGARKGIHIIDLQQTVQLFRQAHDVIVDAVANGG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +I+FV TK QA + V E A+R + V ++WLGG +TN++T+ I++L+ LE + + Sbjct: 66 KIIFVGTKRQAQEAVAEDAQRCGMFYVTNRWLGGTLTNFQTIKHRIERLKHLETMFEDGS 125 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F KKE ++R+ DKL+ AL GI+DM LP + FV+D RE+LAI+E R+L IPIVA Sbjct: 126 IHRFPKKEIAGMQRELDKLQAALGGIKDMEDLPQVAFVIDPKREELAIREFRKLGIPIVA 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 V DTN +PD VDYVIPGNDD+ R+I LF VA A ++G+AR+ Sbjct: 186 VTDTNCDPDQVDYVIPGNDDAIRAIKLFVSSVADACLEGLARR 228 >gi|187928367|ref|YP_001898854.1| 30S ribosomal protein S2 [Ralstonia pickettii 12J] gi|238691812|sp|B2UB06|RS2_RALPJ RecName: Full=30S ribosomal protein S2 gi|187725257|gb|ACD26422.1| ribosomal protein S2 [Ralstonia pickettii 12J] Length = 247 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/224 (49%), Positives = 158/224 (70%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM Q AL+ + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYQDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E + KE Sbjct: 64 GTILFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDME--VAKE 121 Query: 127 ---NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ DKL +++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGATETMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|254819056|ref|ZP_05224057.1| 30S ribosomal protein S2 [Mycobacterium intracellulare ATCC 13950] Length = 278 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/239 (47%), Positives = 163/239 (68%), Gaps = 5/239 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDQAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+++KL R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKNKLDRSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 ++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K E Sbjct: 183 VIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEAE 241 >gi|89075420|ref|ZP_01161837.1| 30S ribosomal protein S2 [Photobacterium sp. SKA34] gi|89048836|gb|EAR54406.1| 30S ribosomal protein S2 [Photobacterium sp. SKA34] Length = 242 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/214 (52%), Positives = 153/214 (71%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I AR Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNAALAEIEKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + EAA QY VN++WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASESIKEAAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQSTDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI++MGGLPD MFV+ + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIGADCEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 AVVDTNS+PD VD+VIPGNDD+ R+I L+ VA Sbjct: 185 AVVDTNSDPDGVDFVIPGNDDAIRAIQLYTGAVA 218 >gi|284032630|ref|YP_003382561.1| 30S ribosomal protein S2 [Kribbella flavida DSM 17836] gi|283811923|gb|ADB33762.1| ribosomal protein S2 [Kribbella flavida DSM 17836] Length = 328 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 110/222 (49%), Positives = 155/222 (69%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESGV FGH+ WNPKM+RYI ERN +IIDL Q++ + +A + + TVA G Sbjct: 5 TMKQLLESGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQSLSYIDRAYEFVRSTVASG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE--ELLN 124 G ILFV TK QA + + E A R VN +WLGGM+TN++TV++ +Q+L++LE + + Sbjct: 65 GAILFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFQTVNKRLQRLKELELIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L R+ DKL + L GIRDMG +P +++VDT +E LA+ EAR+L++PI Sbjct: 125 VAGSGVTKKELLQKRREHDKLLKTLGGIRDMGRVPSAVWIVDTKKEHLAVDEARKLKLPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PD VD+ IPGNDD+ RS+ L +VA A DG+ Sbjct: 185 IGILDTNCDPDEVDFPIPGNDDAIRSVGLLTRVVADAVADGL 226 >gi|226952616|ref|ZP_03823080.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244] gi|226836696|gb|EEH69079.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244] Length = 267 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/240 (46%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 18 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 78 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 137 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 138 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 197 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 198 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 257 >gi|254382044|ref|ZP_04997406.1| 30S ribosomal protein S2 [Streptomyces sp. Mg1] gi|194340951|gb|EDX21917.1| 30S ribosomal protein S2 [Streptomyces sp. Mg1] Length = 309 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 163/240 (67%), Gaps = 2/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + Sbjct: 1 MAMAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 ETVAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELE 120 Query: 121 --ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR Sbjct: 121 AIDFEDVAASGLTKKELLVLSREKIKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEAR 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D+K Sbjct: 181 KLHIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSK 240 >gi|111023537|ref|YP_706509.1| 30S ribosomal protein S2 [Rhodococcus jostii RHA1] gi|123339669|sp|Q0S285|RS2_RHOSR RecName: Full=30S ribosomal protein S2 gi|110823067|gb|ABG98351.1| 30S ribosomal protein S2 [Rhodococcus jostii RHA1] Length = 300 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 112/223 (50%), Positives = 156/223 (69%), Gaps = 5/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A R VN +WLGGM+TN+ TV + + +L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+ KL R L GIRDM +P ++VVDTN+E LA+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWVVDTNKEHLAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ Sbjct: 183 VIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGV 225 >gi|328954580|ref|YP_004371914.1| ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109] gi|328454904|gb|AEB10733.1| ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109] Length = 281 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 162/222 (72%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A +++ VA G Sbjct: 5 TMKELLEAGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVQLFKVAFDFVTERVASG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA D + E A R + VN +WLGGM+TN++T+ +SI +L++ E++ KE Sbjct: 65 GKMLFVGTKKQAQDAIFEEANRCGMFFVNHRWLGGMLTNFQTIKKSIDRLKNFEQM--KE 122 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + F KKE L +E+K KL ++L GI++M GLPD +FVVD ++E +A+QEAR+++IP Sbjct: 123 DGSIKRFPKKEILTMEKKAAKLDKSLGGIKNMNGLPDAVFVVDPHKENIAVQEARKMQIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VD+N +P +DYVIPGNDD+ R+I L +A+A ++G Sbjct: 183 VVAIVDSNCDPTEIDYVIPGNDDAIRAIRLITSRIANACLEG 224 >gi|255325240|ref|ZP_05366346.1| ribosomal protein S2 [Corynebacterium tuberculostearicum SK141] gi|255297805|gb|EET77116.1| ribosomal protein S2 [Corynebacterium tuberculostearicum SK141] Length = 344 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 114/245 (46%), Positives = 170/245 (69%), Gaps = 3/245 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 72 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 131 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + +E Sbjct: 132 GTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDERE 191 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA +L IP+ Sbjct: 192 DGYKGRTKKEVLMLNRERAKLERVLGGISDMAKTPSALWIVDTNKEHIAVKEAHKLNIPV 251 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G AR+ + A ++AG++ Sbjct: 252 VAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEAAGDS 311 Query: 244 VVHSK 248 K Sbjct: 312 AEKEK 316 >gi|21223979|ref|NP_629758.1| 30S ribosomal protein S2 [Streptomyces coelicolor A3(2)] gi|3192017|emb|CAA19416.1| 30S ribosomal protein S2 [Streptomyces coelicolor A3(2)] Length = 310 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 114/240 (47%), Positives = 168/240 (70%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADT-KSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + GA K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAGGAKGDKAAGE 244 >gi|256784934|ref|ZP_05523365.1| 30S ribosomal protein S2 [Streptomyces lividans TK24] gi|289768827|ref|ZP_06528205.1| 30S ribosomal protein S2 [Streptomyces lividans TK24] gi|289699026|gb|EFD66455.1| 30S ribosomal protein S2 [Streptomyces lividans TK24] Length = 315 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 114/240 (47%), Positives = 168/240 (70%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADT-KSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + GA K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAGGAKGDKAAGE 244 >gi|78356180|ref|YP_387629.1| 30S ribosomal protein S2 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123727753|sp|Q313G2|RS2_DESDG RecName: Full=30S ribosomal protein S2 gi|78218585|gb|ABB37934.1| SSU ribosomal protein S2P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 260 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 152/222 (68%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ +LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A + DTVARG Sbjct: 5 TMKGMLETGVHFGHQTRRWNPKMGTYIFGARNGIHIIDLQQTVKLFRTAHDKVVDTVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+++F+ TK QA + V A R+ QY V ++W+GG +TN++T+ +SI +L+ LE + Sbjct: 65 GKVIFIGTKRQAQEAVQTEAGRAGQYYVTNRWMGGTLTNFQTIRKSIDRLKKLEVMFEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L + R+ DKL L GI+DM LP L F++D NRE +A++E RRL IPIV Sbjct: 125 TVNRYQKKEVLRLRREMDKLNLVLGGIKDMENLPQLAFIIDPNREDIAVKECRRLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AV DTN +PDL+DYVIPGNDD+ R+I LF +A A ++G A Sbjct: 185 AVTDTNCDPDLIDYVIPGNDDAIRAIKLFVGHIADACLEGEA 226 >gi|127513563|ref|YP_001094760.1| 30S ribosomal protein S2 [Shewanella loihica PV-4] gi|166226753|sp|A3QGA3|RS2_SHELP RecName: Full=30S ribosomal protein S2 gi|126638858|gb|ABO24501.1| SSU ribosomal protein S2P [Shewanella loihica PV-4] Length = 242 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 162/220 (73%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + EAA QY V+++WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 65 GKVLFVGTKRAASEAIKEAAISCDQYYVDNRWLGGMLTNWKTVRQSIKRLKDLESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD ++Y++PGNDD+ R+I L+ + VA+AA G Sbjct: 185 AVVDTNSSPDGINYIVPGNDDAMRAIRLYAESVAAAAKAG 224 >gi|225874497|ref|YP_002755956.1| ribosomal protein S2 [Acidobacterium capsulatum ATCC 51196] gi|254764449|sp|C1F401|RS2_ACIC5 RecName: Full=30S ribosomal protein S2 gi|225791895|gb|ACO31985.1| ribosomal protein S2 [Acidobacterium capsulatum ATCC 51196] Length = 301 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 160/225 (71%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ W+P+M+ YIF ERN +IIDL +T+ M + A + ++D Sbjct: 1 MANITMKELLEAGVHFGHQTKRWDPRMKEYIFGERNGIYIIDLQKTLKMFKDASKYVTDM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G ILFV TK QA D + E A R Y +N++WLGG++TNW TV +S+++L++L+E+ Sbjct: 61 CAQGKVILFVGTKRQAQDAIAEEANRCGMYYINNRWLGGLLTNWVTVQKSVKRLQELDEM 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 TKKE + +ER+R L+ L GI++M LPD +FVVD+N E +A++EAR+L Sbjct: 121 ATDGRYDLLTKKEVIRLERERKHLQANLAGIKNMRRLPDAIFVVDSNNEAIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A + I+G+ Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTSKIADSVIEGV 225 >gi|295676825|ref|YP_003605349.1| ribosomal protein S2 [Burkholderia sp. CCGE1002] gi|295436668|gb|ADG15838.1| ribosomal protein S2 [Burkholderia sp. CCGE1002] Length = 250 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLASNR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L IP++ Sbjct: 124 ETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDASKAVALYAAGVADAILEGRA 225 >gi|50085372|ref|YP_046882.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1] gi|61215533|sp|Q6FA53|RS2_ACIAD RecName: Full=30S ribosomal protein S2 gi|49531348|emb|CAG69060.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1] Length = 249 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 167/250 (66%), Gaps = 3/250 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G ++++ A+ ++ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQA 238 Query: 240 AGETVVHSKE 249 GE + E Sbjct: 239 KGEEAPAASE 248 >gi|227495069|ref|ZP_03925385.1| ribosomal protein S2 [Actinomyces coleocanis DSM 15436] gi|226831521|gb|EEH63904.1| ribosomal protein S2 [Actinomyces coleocanis DSM 15436] Length = 269 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 114/228 (50%), Positives = 162/228 (71%), Gaps = 4/228 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MAL T+RQLLESGV FGH+ WNPKM+R+I ERNN +IIDL QTV + +A + + Sbjct: 1 MAL--VTMRQLLESGVHFGHQTRRWNPKMKRFILTERNNIYIIDLHQTVADIDRAYEFVK 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + IQ++++LE Sbjct: 59 ETVAHGGNILFVGTKKQAQEAIEEQAQRVGMPYVNHRWLGGMLTNFNTVYKRIQRMKELE 118 Query: 121 EL--LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++ + + G TKKE L + R+++KL R+L GIRDM +P +++VDT +E LAI EA+ Sbjct: 119 QIDFDDVASSGRTKKELLMMRREQEKLARSLGGIRDMQKVPSALWIVDTKKEHLAIAEAK 178 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +L IP+VA++DTN +PD VDY IPGNDD+ RS+ + +++ A G+ Sbjct: 179 KLNIPVVAILDTNCDPDEVDYGIPGNDDAIRSVGILTRVISDAVAAGL 226 >gi|239944633|ref|ZP_04696570.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 15998] gi|239991097|ref|ZP_04711761.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 11379] gi|291448097|ref|ZP_06587487.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 15998] gi|291351044|gb|EFE77948.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 15998] Length = 304 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/272 (44%), Positives = 180/272 (66%), Gaps = 9/272 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++L EL++ E Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKEL-ELIDFE 123 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP Sbjct: 124 DVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKS 239 +VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+ Sbjct: 184 VVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKA 243 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 AGE + + + LE D + ++ + Q A Sbjct: 244 AGEPLAEWERDL-LEGDKKDETAAAAEVQSSA 274 >gi|284992375|ref|YP_003410929.1| 30S ribosomal protein S2 [Geodermatophilus obscurus DSM 43160] gi|284065620|gb|ADB76558.1| ribosomal protein S2 [Geodermatophilus obscurus DSM 43160] Length = 316 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 115/248 (46%), Positives = 167/248 (67%), Gaps = 8/248 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLL+SGV FGH+ WNPKM+R+IF ERN +IIDL QT+ + A + + TVA G Sbjct: 5 SMKQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLGYIDNAYEFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + +Q+L++LE++ E Sbjct: 65 GSILFVGTKRQAQEVIAEQAQRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEDM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G +KKE+L + R++ KL+R+L GIRDM +P +++VDT +E +A+ EAR+L I Sbjct: 122 QTGVLVSLSKKEQLGLTREKAKLERSLGGIRDMQKVPSAVWIVDTKKEHIAVGEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSAG 241 P+VA++DTN +PD VDY IPGNDD+ RS AL ++A A +G+ AR S A + G Sbjct: 182 PVVAILDTNCDPDEVDYKIPGNDDAIRSAALLTRVIADAVAEGLMARSASQANAGREDGG 241 Query: 242 ETVVHSKE 249 + + E Sbjct: 242 QQAIGGDE 249 >gi|254281535|ref|ZP_04956503.1| ribosomal protein S2 [gamma proteobacterium NOR51-B] gi|219677738|gb|EED34087.1| ribosomal protein S2 [gamma proteobacterium NOR51-B] Length = 282 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/229 (49%), Positives = 151/229 (65%), Gaps = 7/229 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + Q ++R LL++G FGH+ WNPKM++YIF RN HII+L TVP AL + Sbjct: 20 MIMSQVSMRDLLQAGAHFGHQTRFWNPKMDQYIFGARNKIHIINLEHTVPAFNDALNHVK 79 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +ILFV TK A + E A R V+ +WLGGM+TN+KT+ SI++ RDLE Sbjct: 80 KLAGNKNQILFVGTKRAAGKIIEENATRCGMPYVSHRWLGGMLTNYKTIRSSIKRYRDLE 139 Query: 121 ELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 E +E G TKKE L R +DKL+R++ GI+DMGGLPD +FV+D + E++AI E Sbjct: 140 E---QEKDGTLEKLTKKEALMRTRTKDKLERSIGGIKDMGGLPDALFVIDVDHERIAITE 196 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A +L IP++ +VDTNSNPD VDYVIPGNDD+ R+I L+ VA A I+G Sbjct: 197 ANKLGIPVIGIVDTNSNPDGVDYVIPGNDDAIRAIKLYVKAVADAVIEG 245 >gi|332762043|gb|EGJ92314.1| ribosomal protein S2 [Shigella flexneri 2747-71] gi|333009282|gb|EGK28738.1| ribosomal protein S2 [Shigella flexneri K-218] gi|333022193|gb|EGK41432.1| ribosomal protein S2 [Shigella flexneri K-304] Length = 236 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 112/219 (51%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ V+R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIVSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 219 >gi|209518708|ref|ZP_03267524.1| ribosomal protein S2 [Burkholderia sp. H160] gi|209500822|gb|EEA00862.1| ribosomal protein S2 [Burkholderia sp. H160] Length = 250 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLASNR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L IP++ Sbjct: 124 ETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDASKAVALYAAGVADAILEGRA 225 >gi|152965383|ref|YP_001361167.1| ribosomal protein S2 [Kineococcus radiotolerans SRS30216] gi|189044942|sp|A6W7W4|RS2_KINRD RecName: Full=30S ribosomal protein S2 gi|151359900|gb|ABS02903.1| ribosomal protein S2 [Kineococcus radiotolerans SRS30216] Length = 311 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 107/227 (47%), Positives = 159/227 (70%), Gaps = 2/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R++F ERN +IIDL Q++ + +A + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFLFTERNGIYIIDLQQSLSFIDRAYDFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE--LLN 124 G I+F+ TK QA + + E A+R VN +WLGGM+TN++TV++ I ++R+LE+ + Sbjct: 65 GSIMFIGTKKQAQESIAEQARRVGMPFVNQRWLGGMLTNFQTVNKRIARMRELEQVDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R+ DKL + L GIR+M +P +++VDTN+E LA+ EA++L IP+ Sbjct: 125 VAGSGLTKKELLVLRREYDKLTKTLGGIREMTKVPSAVWIVDTNKEHLAVDEAKKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++D+N +PD VDY IPGNDD+ RS+ L ++A A +G+ +H Sbjct: 185 VAILDSNCDPDDVDYRIPGNDDAIRSVTLLTRVIADAVAEGLQVRHG 231 >gi|325673459|ref|ZP_08153150.1| 30S ribosomal protein S2 [Rhodococcus equi ATCC 33707] gi|325555480|gb|EGD25151.1| 30S ribosomal protein S2 [Rhodococcus equi ATCC 33707] Length = 271 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 117/240 (48%), Positives = 162/240 (67%), Gaps = 6/240 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA GG Sbjct: 1 MRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 61 TILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM--EQT 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 GF TKKE L + R+ KL R L GIRDM +P ++VVDTN+E +A+ EAR+L IP+ Sbjct: 119 GGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLNIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSAGET 243 +A++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ AR + D K T Sbjct: 179 IAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGASADKDAKPEAGT 238 >gi|170692142|ref|ZP_02883305.1| ribosomal protein S2 [Burkholderia graminis C4D1M] gi|170142572|gb|EDT10737.1| ribosomal protein S2 [Burkholderia graminis C4D1M] Length = 250 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGRA 225 >gi|326776290|ref|ZP_08235555.1| ribosomal protein S2 [Streptomyces cf. griseus XylebKG-1] gi|326656623|gb|EGE41469.1| ribosomal protein S2 [Streptomyces cf. griseus XylebKG-1] Length = 304 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/272 (44%), Positives = 180/272 (66%), Gaps = 9/272 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++L EL++ E Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKEL-ELIDFE 123 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP Sbjct: 124 DVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKS 239 +VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+ Sbjct: 184 VVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKA 243 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 AGE + + + LE D + ++ + Q A Sbjct: 244 AGEPLAEWERDL-LEGDKKDETAAAAEVQTSA 274 >gi|182435656|ref|YP_001823375.1| 30S ribosomal protein S2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|238689006|sp|B1VYT7|RS2_STRGG RecName: Full=30S ribosomal protein S2 gi|178464172|dbj|BAG18692.1| putative 30S ribosomal protein S2 [Streptomyces griseus subsp. griseus NBRC 13350] Length = 306 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/272 (44%), Positives = 180/272 (66%), Gaps = 9/272 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++L EL++ E Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKEL-ELIDFE 123 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP Sbjct: 124 DVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKS 239 +VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+ Sbjct: 184 VVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKA 243 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 AGE + + + LE D + ++ + Q A Sbjct: 244 AGEPLAEWERDL-LEGDKKDETAAAAEVQTSA 274 >gi|118617637|ref|YP_905969.1| 30S ribosomal protein S2 [Mycobacterium ulcerans Agy99] gi|118569747|gb|ABL04498.1| 30S ribosomal protein S2 RpsB [Mycobacterium ulcerans Agy99] Length = 271 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 115/245 (46%), Positives = 169/245 (68%), Gaps = 9/245 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA GG Sbjct: 1 MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + ++ Sbjct: 61 TVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM--EQT 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 GF +KKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP+ Sbjct: 119 GGFEGRSKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + GA + G+ V Sbjct: 179 IAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGL---QARAGAG-RGDGKPV 234 Query: 245 VHSKE 249 V + E Sbjct: 235 VEAAE 239 >gi|114562448|ref|YP_749961.1| 30S ribosomal protein S2 [Shewanella frigidimarina NCIMB 400] gi|122300317|sp|Q085E2|RS2_SHEFN RecName: Full=30S ribosomal protein S2 gi|114333741|gb|ABI71123.1| SSU ribosomal protein S2P [Shewanella frigidimarina NCIMB 400] Length = 242 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 109/220 (49%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A + + +A QY V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 65 GKVLFVGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G Sbjct: 185 AVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANAG 224 >gi|329936705|ref|ZP_08286412.1| 30S ribosomal protein S2 (SSU) [Streptomyces griseoaurantiacus M045] gi|329303935|gb|EGG47818.1| 30S ribosomal protein S2 (SSU) [Streptomyces griseoaurantiacus M045] Length = 307 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 112/239 (46%), Positives = 166/239 (69%), Gaps = 3/239 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAENKGEKAAGE 243 >gi|167563188|ref|ZP_02356104.1| 30S ribosomal protein S2 [Burkholderia oklahomensis EO147] gi|167570371|ref|ZP_02363245.1| 30S ribosomal protein S2 [Burkholderia oklahomensis C6786] Length = 246 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 184 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 225 >gi|300724795|ref|YP_003714120.1| 30S ribosomal subunit protein S2 [Xenorhabdus nematophila ATCC 19061] gi|297631337|emb|CBJ92032.1| 30S ribosomal subunit protein S2 [Xenorhabdus nematophila ATCC 19061] Length = 241 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNGALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ + +AA QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAIKDAALSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLE--VQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 183 VFAIVDTNSDPDGVDFIIPGNDDAIRAVKLYLTAVATAVREG 224 >gi|302542192|ref|ZP_07294534.1| ribosomal protein S2 [Streptomyces hygroscopicus ATCC 53653] gi|302459810|gb|EFL22903.1| ribosomal protein S2 [Streptomyces himastatinicus ATCC 53653] Length = 345 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 115/241 (47%), Positives = 167/241 (69%), Gaps = 5/241 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+LRIP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADT--KSAG 241 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR G + K AG Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDEKADKGAG 244 Query: 242 E 242 E Sbjct: 245 E 245 >gi|282861388|ref|ZP_06270453.1| ribosomal protein S2 [Streptomyces sp. ACTE] gi|282564046|gb|EFB69583.1| ribosomal protein S2 [Streptomyces sp. ACTE] Length = 310 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 116/243 (47%), Positives = 168/243 (69%), Gaps = 8/243 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++L EL++ E Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKEL-ELIDFE 123 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP Sbjct: 124 DVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKS 239 +VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+ Sbjct: 184 VVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKA 243 Query: 240 AGE 242 AGE Sbjct: 244 AGE 246 >gi|110804221|ref|YP_687741.1| 30S ribosomal protein S2 [Shigella flexneri 5 str. 8401] gi|110613769|gb|ABF02436.1| 30S ribosomal subunit protein S2 [Shigella flexneri 5 str. 8401] Length = 307 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V+R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIVSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 290 >gi|328885350|emb|CCA58589.1| SSU ribosomal protein S2p [Streptomyces venezuelae ATCC 10712] Length = 299 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 114/242 (47%), Positives = 167/242 (69%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKSA 240 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+A Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKAA 244 Query: 241 GE 242 GE Sbjct: 245 GE 246 >gi|239908429|ref|YP_002955171.1| 30S ribosomal protein S2 [Desulfovibrio magneticus RS-1] gi|259495051|sp|C4XMY2|RS2_DESMR RecName: Full=30S ribosomal protein S2 gi|239798296|dbj|BAH77285.1| 30S ribosomal protein S2 [Desulfovibrio magneticus RS-1] Length = 258 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 111/227 (48%), Positives = 158/227 (69%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM +IF RN HIIDL QTV + QKA IS+ Sbjct: 1 MPYVTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR++FV TK QA + V + A+R Q+ V ++W+GGM+TN++T+ +SI +++ LE + Sbjct: 61 VAGGGRVIFVGTKRQAQESVKKEAERVGQFSVTNRWMGGMLTNFQTIKKSIDRMKTLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE + + R+ KL L GI+ M LP F++D RE++A+QE R+L Sbjct: 121 FEDGSIKRFPKKEIVMMGREVAKLNDNLGGIKHMDRLPQAAFIIDPKREEIAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPIVAVVDTN +PD++DYVIPGNDD+ R+I LF +A A ++G A+ Sbjct: 181 IPIVAVVDTNCDPDVIDYVIPGNDDAIRAIKLFAASIAEACMEGAAQ 227 >gi|83654618|gb|ABC38681.1| ribosomal protein S2 [Burkholderia thailandensis E264] Length = 304 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 62 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANR 121 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 122 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 181 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 182 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 241 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A Sbjct: 242 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRA 283 >gi|323160213|gb|EFZ46172.1| ribosomal protein S2 [Escherichia coli E128010] Length = 236 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 111/219 (50%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 219 >gi|29829169|ref|NP_823803.1| 30S ribosomal protein S2 [Streptomyces avermitilis MA-4680] gi|38258303|sp|Q82JX7|RS2_STRAW RecName: Full=30S ribosomal protein S2 gi|29606275|dbj|BAC70338.1| putative ribosomal protein S2 [Streptomyces avermitilis MA-4680] Length = 308 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 112/239 (46%), Positives = 166/239 (69%), Gaps = 3/239 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAGKAEGDKAAGE 243 >gi|164454441|dbj|BAF96777.1| ribosomal protein S2 [Shewanella livingstonensis] Length = 311 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 109/220 (49%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 74 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKK 133 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A + + +A QY V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 134 GKVLFVGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDG 193 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ DKL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 194 TFDKLTKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVV 253 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G Sbjct: 254 AVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANAG 293 >gi|227503379|ref|ZP_03933428.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49725] gi|227075882|gb|EEI13845.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49725] Length = 277 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 112/240 (46%), Positives = 169/240 (70%), Gaps = 3/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + +E Sbjct: 65 GTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDERE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A++EA +L IP+ Sbjct: 125 DGYKGRTKKEVLMLNRERAKLERVLGGISEMAKTPSALWIVDTNKEHIAVKEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G AR+ + A ++AG++ Sbjct: 185 VAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEAAGDS 244 >gi|53719768|ref|YP_108754.1| 30S ribosomal protein S2 [Burkholderia pseudomallei K96243] gi|53723739|ref|YP_103195.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 23344] gi|67641710|ref|ZP_00440479.1| 30S ribosomal protein S2 [Burkholderia mallei GB8 horse 4] gi|76808700|ref|YP_333975.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710b] gi|121598729|ref|YP_993372.1| 30S ribosomal protein S2 [Burkholderia mallei SAVP1] gi|124386642|ref|YP_001029191.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10229] gi|126439256|ref|YP_001059469.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 668] gi|126448724|ref|YP_001080879.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10247] gi|126454332|ref|YP_001066752.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106a] gi|134277198|ref|ZP_01763913.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 305] gi|167000550|ref|ZP_02266361.1| 30S ribosomal protein S2 [Burkholderia mallei PRL-20] gi|167720166|ref|ZP_02403402.1| 30S ribosomal protein S2 [Burkholderia pseudomallei DM98] gi|167739171|ref|ZP_02411945.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 14] gi|167816382|ref|ZP_02448062.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 91] gi|167824760|ref|ZP_02456231.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 9] gi|167846292|ref|ZP_02471800.1| 30S ribosomal protein S2 [Burkholderia pseudomallei B7210] gi|167894874|ref|ZP_02482276.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 7894] gi|167903263|ref|ZP_02490468.1| 30S ribosomal protein S2 [Burkholderia pseudomallei NCTC 13177] gi|167911504|ref|ZP_02498595.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 112] gi|167919513|ref|ZP_02506604.1| 30S ribosomal protein S2 [Burkholderia pseudomallei BCC215] gi|217421460|ref|ZP_03452964.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 576] gi|226200131|ref|ZP_03795677.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pakistan 9] gi|237812808|ref|YP_002897259.1| ribosomal protein S2 [Burkholderia pseudomallei MSHR346] gi|242316914|ref|ZP_04815930.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106b] gi|254178385|ref|ZP_04885040.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 10399] gi|254179321|ref|ZP_04885920.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1655] gi|254189293|ref|ZP_04895804.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pasteur 52237] gi|254197600|ref|ZP_04904022.1| 30S ribosomal protein S2 [Burkholderia pseudomallei S13] gi|254200147|ref|ZP_04906513.1| 30S ribosomal protein S2 [Burkholderia mallei FMH] gi|254206485|ref|ZP_04912837.1| 30S ribosomal protein S2 [Burkholderia mallei JHU] gi|254261636|ref|ZP_04952690.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710a] gi|254297205|ref|ZP_04964658.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 406e] gi|254358106|ref|ZP_04974379.1| 30S ribosomal protein S2 [Burkholderia mallei 2002721280] gi|61215451|sp|Q62JC4|RS2_BURMA RecName: Full=30S ribosomal protein S2 gi|61215464|sp|Q63T12|RS2_BURPS RecName: Full=30S ribosomal protein S2 gi|123598728|sp|Q3JR28|RS2_BURP1 RecName: Full=30S ribosomal protein S2 gi|166225246|sp|A3MKU3|RS2_BURM7 RecName: Full=30S ribosomal protein S2 gi|166225247|sp|A2SB72|RS2_BURM9 RecName: Full=30S ribosomal protein S2 gi|166225248|sp|A1V569|RS2_BURMS RecName: Full=30S ribosomal protein S2 gi|166225249|sp|A3NWN1|RS2_BURP0 RecName: Full=30S ribosomal protein S2 gi|166225250|sp|A3NAU8|RS2_BURP6 RecName: Full=30S ribosomal protein S2 gi|52210182|emb|CAH36161.1| 30S ribosomal protein S2 [Burkholderia pseudomallei K96243] gi|52427162|gb|AAU47755.1| ribosomal protein S2 [Burkholderia mallei ATCC 23344] gi|76578153|gb|ABA47628.1| ribosomal protein S2 [Burkholderia pseudomallei 1710b] gi|121227539|gb|ABM50057.1| 30S ribosomal protein S2 [Burkholderia mallei SAVP1] gi|124294662|gb|ABN03931.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10229] gi|126218749|gb|ABN82255.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 668] gi|126227974|gb|ABN91514.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106a] gi|126241594|gb|ABO04687.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10247] gi|134250848|gb|EBA50927.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 305] gi|147749743|gb|EDK56817.1| 30S ribosomal protein S2 [Burkholderia mallei FMH] gi|147753928|gb|EDK60993.1| 30S ribosomal protein S2 [Burkholderia mallei JHU] gi|148027233|gb|EDK85254.1| 30S ribosomal protein S2 [Burkholderia mallei 2002721280] gi|157807778|gb|EDO84948.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 406e] gi|157936972|gb|EDO92642.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pasteur 52237] gi|160699424|gb|EDP89394.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 10399] gi|169654341|gb|EDS87034.1| 30S ribosomal protein S2 [Burkholderia pseudomallei S13] gi|184209861|gb|EDU06904.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1655] gi|217395202|gb|EEC35220.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 576] gi|225927815|gb|EEH23856.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pakistan 9] gi|237502852|gb|ACQ95170.1| ribosomal protein S2 [Burkholderia pseudomallei MSHR346] gi|238522672|gb|EEP86115.1| 30S ribosomal protein S2 [Burkholderia mallei GB8 horse 4] gi|242140153|gb|EES26555.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106b] gi|243063480|gb|EES45666.1| 30S ribosomal protein S2 [Burkholderia mallei PRL-20] gi|254220325|gb|EET09709.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710a] Length = 246 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 157/223 (70%), Gaps = 1/223 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 3 ITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK Q+ D + + A R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEA 122 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRA 225 >gi|320008279|gb|ADW03129.1| ribosomal protein S2 [Streptomyces flavogriseus ATCC 33331] Length = 306 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 116/243 (47%), Positives = 168/243 (69%), Gaps = 8/243 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++L EL++ E Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKEL-ELIDFE 123 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP Sbjct: 124 DVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKS 239 +VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+ Sbjct: 184 VVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKA 243 Query: 240 AGE 242 AGE Sbjct: 244 AGE 246 >gi|15799851|ref|NP_285863.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 EDL933] gi|15829425|ref|NP_308198.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. Sakai] gi|16128162|ref|NP_414711.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. MG1655] gi|82775559|ref|YP_401906.1| 30S ribosomal protein S2 [Shigella dysenteriae Sd197] gi|89107049|ref|AP_000829.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. W3110] gi|110640388|ref|YP_668116.1| 30S ribosomal protein S2 [Escherichia coli 536] gi|117622454|ref|YP_851367.1| 30S ribosomal protein S2 [Escherichia coli APEC O1] gi|161486319|ref|NP_752154.2| 30S ribosomal protein S2 [Escherichia coli CFT073] gi|162138497|ref|YP_539224.2| 30S ribosomal protein S2 [Escherichia coli UTI89] gi|168751388|ref|ZP_02776410.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4113] gi|168755782|ref|ZP_02780789.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4401] gi|168764324|ref|ZP_02789331.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4501] gi|168770358|ref|ZP_02795365.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4486] gi|168777006|ref|ZP_02802013.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4196] gi|168782061|ref|ZP_02807068.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4076] gi|168789278|ref|ZP_02814285.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC869] gi|168802324|ref|ZP_02827331.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC508] gi|170021478|ref|YP_001726432.1| 30S ribosomal protein S2 [Escherichia coli ATCC 8739] gi|170079805|ref|YP_001729125.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. DH10B] gi|170679652|ref|YP_001742296.1| 30S ribosomal protein S2 [Escherichia coli SMS-3-5] gi|188492026|ref|ZP_02999296.1| ribosomal protein S2 [Escherichia coli 53638] gi|191172818|ref|ZP_03034355.1| ribosomal protein S2 [Escherichia coli F11] gi|194433453|ref|ZP_03065732.1| ribosomal protein S2 [Shigella dysenteriae 1012] gi|194439117|ref|ZP_03071199.1| ribosomal protein S2 [Escherichia coli 101-1] gi|195938149|ref|ZP_03083531.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. EC4024] gi|208806144|ref|ZP_03248481.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4206] gi|208812459|ref|ZP_03253788.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4045] gi|208818702|ref|ZP_03259022.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4042] gi|209399355|ref|YP_002268776.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4115] gi|215485330|ref|YP_002327761.1| 30S ribosomal protein S2 [Escherichia coli O127:H6 str. E2348/69] gi|217324474|ref|ZP_03440558.1| ribosomal protein S2 [Escherichia coli O157:H7 str. TW14588] gi|218547624|ref|YP_002381415.1| 30S ribosomal protein S2 [Escherichia fergusonii ATCC 35469] gi|218557110|ref|YP_002390023.1| 30S ribosomal protein S2 [Escherichia coli S88] gi|218688044|ref|YP_002396256.1| 30S ribosomal protein S2 [Escherichia coli ED1a] gi|218698588|ref|YP_002406217.1| 30S ribosomal protein S2 [Escherichia coli IAI39] gi|218703423|ref|YP_002410942.1| 30S ribosomal protein S2 [Escherichia coli UMN026] gi|227884918|ref|ZP_04002723.1| ribosomal protein S2 [Escherichia coli 83972] gi|237704328|ref|ZP_04534809.1| 30S ribosomal protein S2 [Escherichia sp. 3_2_53FAA] gi|238899567|ref|YP_002925363.1| 30S ribosomal subunit protein S2 [Escherichia coli BW2952] gi|253774804|ref|YP_003037635.1| 30S ribosomal protein S2 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037588|ref|ZP_04871665.1| 30S ribosomal protein S2 [Escherichia sp. 1_1_43] gi|254160288|ref|YP_003043396.1| 30S ribosomal protein S2 [Escherichia coli B str. REL606] gi|254791302|ref|YP_003076139.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. TW14359] gi|256025481|ref|ZP_05439346.1| 30S ribosomal protein S2 [Escherichia sp. 4_1_40B] gi|261226923|ref|ZP_05941204.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. FRIK2000] gi|261255327|ref|ZP_05947860.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. FRIK966] gi|291280991|ref|YP_003497809.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. CB9615] gi|293403238|ref|ZP_06647335.1| rpsB [Escherichia coli FVEC1412] gi|293408261|ref|ZP_06652101.1| 30S ribosomal protein S2 [Escherichia coli B354] gi|293418055|ref|ZP_06660677.1| 30S ribosomal protein S2 [Escherichia coli B185] gi|297519876|ref|ZP_06938262.1| 30S ribosomal protein S2 [Escherichia coli OP50] gi|298378773|ref|ZP_06988657.1| 30S ribosomal protein S2 [Escherichia coli FVEC1302] gi|300900794|ref|ZP_07118937.1| ribosomal protein S2 [Escherichia coli MS 198-1] gi|300919733|ref|ZP_07136218.1| ribosomal protein S2 [Escherichia coli MS 115-1] gi|300932123|ref|ZP_07147408.1| ribosomal protein S2 [Escherichia coli MS 187-1] gi|300938576|ref|ZP_07153309.1| ribosomal protein S2 [Escherichia coli MS 21-1] gi|300949800|ref|ZP_07163773.1| ribosomal protein S2 [Escherichia coli MS 116-1] gi|300956052|ref|ZP_07168377.1| ribosomal protein S2 [Escherichia coli MS 175-1] gi|300984929|ref|ZP_07177194.1| ribosomal protein S2 [Escherichia coli MS 200-1] gi|300993610|ref|ZP_07180466.1| ribosomal protein S2 [Escherichia coli MS 45-1] gi|301025951|ref|ZP_07189435.1| ribosomal protein S2 [Escherichia coli MS 69-1] gi|301028660|ref|ZP_07191883.1| ribosomal protein S2 [Escherichia coli MS 196-1] gi|301049920|ref|ZP_07196843.1| ribosomal protein S2 [Escherichia coli MS 185-1] gi|301646491|ref|ZP_07246367.1| ribosomal protein S2 [Escherichia coli MS 146-1] gi|306815231|ref|ZP_07449380.1| 30S ribosomal protein S2 [Escherichia coli NC101] gi|307136769|ref|ZP_07496125.1| 30S ribosomal protein S2 [Escherichia coli H736] gi|331645311|ref|ZP_08346422.1| ribosomal protein S2 [Escherichia coli M605] gi|331661240|ref|ZP_08362172.1| ribosomal protein S2 [Escherichia coli TA206] gi|331661543|ref|ZP_08362467.1| ribosomal protein S2 [Escherichia coli TA143] gi|331681554|ref|ZP_08382191.1| ribosomal protein S2 [Escherichia coli H299] gi|62288920|sp|P0A7V0|RS2_ECOLI RecName: Full=30S ribosomal protein S2 gi|62288921|sp|P0A7V1|RS2_ECOL6 RecName: Full=30S ribosomal protein S2 gi|62288922|sp|P0A7V2|RS2_ECO57 RecName: Full=30S ribosomal protein S2 gi|123344367|sp|Q0TLG4|RS2_ECOL5 RecName: Full=30S ribosomal protein S2 gi|123728606|sp|Q32JU0|RS2_SHIDS RecName: Full=30S ribosomal protein S2 gi|166225269|sp|A1A7L3|RS2_ECOK1 RecName: Full=30S ribosomal protein S2 gi|189044938|sp|B1IQH2|RS2_ECOLC RecName: Full=30S ribosomal protein S2 gi|209573715|sp|Q1RG21|RS2_ECOUT RecName: Full=30S ribosomal protein S2 gi|226697639|sp|B7MBF0|RS2_ECO45 RecName: Full=30S ribosomal protein S2 gi|226697640|sp|B7NID0|RS2_ECO7I RecName: Full=30S ribosomal protein S2 gi|226697642|sp|B7N836|RS2_ECOLU RecName: Full=30S ribosomal protein S2 gi|226697643|sp|B1LGX0|RS2_ECOSM RecName: Full=30S ribosomal protein S2 gi|226697644|sp|B7LWA8|RS2_ESCF3 RecName: Full=30S ribosomal protein S2 gi|229470513|sp|B1XD38|RS2_ECODH RecName: Full=30S ribosomal protein S2 gi|238058194|sp|B5Z0E7|RS2_ECO5E RecName: Full=30S ribosomal protein S2 gi|254764475|sp|B7UIL4|RS2_ECO27 RecName: Full=30S ribosomal protein S2 gi|254764477|sp|B7MP29|RS2_ECO81 RecName: Full=30S ribosomal protein S2 gi|259495213|sp|C4ZRR1|RS2_ECOBW RecName: Full=30S ribosomal protein S2 gi|116666568|pdb|1VS5|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666620|pdb|1VS7|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|256032353|pdb|3E1A|B Chain B, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Pre-Accommodation State gi|256032410|pdb|3E1C|B Chain B, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Post-Accommodation State gi|257097323|pdb|3I1M|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097375|pdb|3I1O|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097427|pdb|3I1Q|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097481|pdb|3I1S|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097535|pdb|3I1Z|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097590|pdb|3I21|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560308|pdb|3KC4|B Chain B, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3kcr gi|308198688|pdb|3OR9|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308198709|pdb|3ORA|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|326634280|pdb|3IZV|F Chain F, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Small Subunit Of A Ribosome Programmed With A Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|326634305|pdb|3IZW|F Chain F, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding.This Entry Contains The Small Subunit Of A Ribosome Programmed With A Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|12512894|gb|AAG54471.1|AE005193_1 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. EDL933] gi|42842|emb|CAA23631.1| ribosomal protein S2 [Escherichia coli] gi|1552746|gb|AAB08598.1| ribosomal protein S2 [Escherichia coli] gi|1786365|gb|AAC73280.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. MG1655] gi|13359627|dbj|BAB33594.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. Sakai] gi|21239023|dbj|BAB96744.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K12 substr. W3110] gi|81239707|gb|ABB60417.1| 30S ribosomal subunit protein S2 [Shigella dysenteriae Sd197] gi|110341980|gb|ABG68217.1| 30S ribosomal protein S2 [Escherichia coli 536] gi|115511578|gb|ABI99652.1| 30S ribosomal protein S2 [Escherichia coli APEC O1] gi|169756406|gb|ACA79105.1| ribosomal protein S2 [Escherichia coli ATCC 8739] gi|169887640|gb|ACB01347.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. DH10B] gi|170517370|gb|ACB15548.1| ribosomal protein S2 [Escherichia coli SMS-3-5] gi|187767691|gb|EDU31535.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4196] gi|188014562|gb|EDU52684.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4113] gi|188487225|gb|EDU62328.1| ribosomal protein S2 [Escherichia coli 53638] gi|189000441|gb|EDU69427.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4076] gi|189357006|gb|EDU75425.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4401] gi|189360740|gb|EDU79159.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4486] gi|189365653|gb|EDU84069.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4501] gi|189371061|gb|EDU89477.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC869] gi|189375689|gb|EDU94105.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC508] gi|190906968|gb|EDV66570.1| ribosomal protein S2 [Escherichia coli F11] gi|194418381|gb|EDX34471.1| ribosomal protein S2 [Shigella dysenteriae 1012] gi|194421936|gb|EDX37941.1| ribosomal protein S2 [Escherichia coli 101-1] gi|208725945|gb|EDZ75546.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4206] gi|208733736|gb|EDZ82423.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4045] gi|208738825|gb|EDZ86507.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4042] gi|209160755|gb|ACI38188.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4115] gi|209745854|gb|ACI71234.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745856|gb|ACI71235.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745858|gb|ACI71236.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745860|gb|ACI71237.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745862|gb|ACI71238.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|215263402|emb|CAS07722.1| 30S ribosomal subunit protein S2 [Escherichia coli O127:H6 str. E2348/69] gi|217320695|gb|EEC29119.1| ribosomal protein S2 [Escherichia coli O157:H7 str. TW14588] gi|218355165|emb|CAQ87772.1| 30S ribosomal subunit protein S2 [Escherichia fergusonii ATCC 35469] gi|218363879|emb|CAR01544.1| 30S ribosomal subunit protein S2 [Escherichia coli S88] gi|218368574|emb|CAR16311.1| 30S ribosomal subunit protein S2 [Escherichia coli IAI39] gi|218425608|emb|CAR06394.1| 30S ribosomal subunit protein S2 [Escherichia coli ED1a] gi|218430520|emb|CAR11386.1| 30S ribosomal subunit protein S2 [Escherichia coli UMN026] gi|222031999|emb|CAP74738.1| 30S ribosomal protein S2 [Escherichia coli LF82] gi|226840694|gb|EEH72696.1| 30S ribosomal protein S2 [Escherichia sp. 1_1_43] gi|226902240|gb|EEH88499.1| 30S ribosomal protein S2 [Escherichia sp. 3_2_53FAA] gi|227838056|gb|EEJ48522.1| ribosomal protein S2 [Escherichia coli 83972] gi|238859794|gb|ACR61792.1| 30S ribosomal subunit protein S2 [Escherichia coli BW2952] gi|242376001|emb|CAQ30683.1| 30S ribosomal subunit protein S2, subunit of 30S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253325848|gb|ACT30450.1| ribosomal protein S2 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972189|gb|ACT37860.1| 30S ribosomal protein S2 [Escherichia coli B str. REL606] gi|253976398|gb|ACT42068.1| 30S ribosomal protein S2 [Escherichia coli BL21(DE3)] gi|254590702|gb|ACT70063.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. TW14359] gi|260450627|gb|ACX41049.1| ribosomal protein S2 [Escherichia coli DH1] gi|281177394|dbj|BAI53724.1| 30S ribosomal protein S2 [Escherichia coli SE15] gi|284919944|emb|CBG32999.1| 30S ribosomal protein S2 [Escherichia coli 042] gi|290760864|gb|ADD54825.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. CB9615] gi|291430153|gb|EFF03167.1| rpsB [Escherichia coli FVEC1412] gi|291430773|gb|EFF03771.1| 30S ribosomal protein S2 [Escherichia coli B185] gi|291472512|gb|EFF14994.1| 30S ribosomal protein S2 [Escherichia coli B354] gi|294491579|gb|ADE90335.1| ribosomal protein S2 [Escherichia coli IHE3034] gi|298281107|gb|EFI22608.1| 30S ribosomal protein S2 [Escherichia coli FVEC1302] gi|299878329|gb|EFI86540.1| ribosomal protein S2 [Escherichia coli MS 196-1] gi|300298322|gb|EFJ54707.1| ribosomal protein S2 [Escherichia coli MS 185-1] gi|300306579|gb|EFJ61099.1| ribosomal protein S2 [Escherichia coli MS 200-1] gi|300317082|gb|EFJ66866.1| ribosomal protein S2 [Escherichia coli MS 175-1] gi|300355712|gb|EFJ71582.1| ribosomal protein S2 [Escherichia coli MS 198-1] gi|300395750|gb|EFJ79288.1| ribosomal protein S2 [Escherichia coli MS 69-1] gi|300406533|gb|EFJ90071.1| ribosomal protein S2 [Escherichia coli MS 45-1] gi|300413211|gb|EFJ96521.1| ribosomal protein S2 [Escherichia coli MS 115-1] gi|300450798|gb|EFK14418.1| ribosomal protein S2 [Escherichia coli MS 116-1] gi|300456458|gb|EFK19951.1| ribosomal protein S2 [Escherichia coli MS 21-1] gi|300460099|gb|EFK23592.1| ribosomal protein S2 [Escherichia coli MS 187-1] gi|301075295|gb|EFK90101.1| ribosomal protein S2 [Escherichia coli MS 146-1] gi|305850893|gb|EFM51348.1| 30S ribosomal protein S2 [Escherichia coli NC101] gi|307552019|gb|ADN44794.1| hypothetical protein ECABU_c01810 [Escherichia coli ABU 83972] gi|307629745|gb|ADN74049.1| 30S ribosomal protein S2 [Escherichia coli UM146] gi|309700377|emb|CBI99665.1| 30S ribosomal protein S2 [Escherichia coli ETEC H10407] gi|312944777|gb|ADR25604.1| 30S ribosomal protein S2 [Escherichia coli O83:H1 str. NRG 857C] gi|315134859|dbj|BAJ42018.1| 30S ribosomal protein S2 [Escherichia coli DH1] gi|315285264|gb|EFU44709.1| ribosomal protein S2 [Escherichia coli MS 110-3] gi|315294573|gb|EFU53920.1| ribosomal protein S2 [Escherichia coli MS 153-1] gi|315300690|gb|EFU59917.1| ribosomal protein S2 [Escherichia coli MS 16-3] gi|320179910|gb|EFW54854.1| SSU ribosomal protein S2p (SAe) [Shigella boydii ATCC 9905] gi|320190306|gb|EFW64956.1| SSU ribosomal protein S2p (SAe) [Escherichia coli O157:H7 str. EC1212] gi|320196955|gb|EFW71576.1| SSU ribosomal protein S2p (SAe) [Escherichia coli WV_060327] gi|320639975|gb|EFX09560.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. G5101] gi|320644745|gb|EFX13789.1| 30S ribosomal protein S2 [Escherichia coli O157:H- str. 493-89] gi|320652901|gb|EFX21139.1| 30S ribosomal protein S2 [Escherichia coli O157:H- str. H 2687] gi|320658289|gb|EFX26018.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663599|gb|EFX30883.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. USDA 5905] gi|320668912|gb|EFX35707.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. LSU-61] gi|323935008|gb|EGB31381.1| ribosomal protein S2 [Escherichia coli E1520] gi|323939956|gb|EGB36154.1| ribosomal protein S2 [Escherichia coli E482] gi|323950832|gb|EGB46709.1| ribosomal protein S2 [Escherichia coli H252] gi|323955130|gb|EGB50905.1| ribosomal protein S2 [Escherichia coli H263] gi|323959929|gb|EGB55576.1| ribosomal protein S2 [Escherichia coli H489] gi|323964939|gb|EGB60405.1| ribosomal protein S2 [Escherichia coli M863] gi|323970648|gb|EGB65904.1| ribosomal protein S2 [Escherichia coli TA007] gi|323975664|gb|EGB70760.1| ribosomal protein S2 [Escherichia coli TW10509] gi|324008248|gb|EGB77467.1| ribosomal protein S2 [Escherichia coli MS 57-2] gi|324112420|gb|EGC06397.1| ribosomal protein S2 [Escherichia fergusonii B253] gi|325496101|gb|EGC93960.1| 30S ribosomal protein S2 [Escherichia fergusonii ECD227] gi|326339777|gb|EGD63585.1| SSU ribosomal protein S2p (SAe) [Escherichia coli O157:H7 str. 1044] gi|326345112|gb|EGD68855.1| SSU ribosomal protein S2p (SAe) [Escherichia coli O157:H7 str. 1125] gi|330910019|gb|EGH38529.1| SSU ribosomal protein S2p, SAe [Escherichia coli AA86] gi|331046068|gb|EGI18187.1| ribosomal protein S2 [Escherichia coli M605] gi|331052282|gb|EGI24321.1| ribosomal protein S2 [Escherichia coli TA206] gi|331061458|gb|EGI33421.1| ribosomal protein S2 [Escherichia coli TA143] gi|331081775|gb|EGI52936.1| ribosomal protein S2 [Escherichia coli H299] gi|332341501|gb|AEE54835.1| 30S ribosomal protein S2 RpsB [Escherichia coli UMNK88] Length = 241 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 224 >gi|238751451|ref|ZP_04612943.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380] gi|238796608|ref|ZP_04640115.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969] gi|238710318|gb|EEQ02544.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380] gi|238719586|gb|EEQ11395.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969] Length = 241 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 158/222 (71%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVNEG 224 >gi|254392084|ref|ZP_05007273.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|294815386|ref|ZP_06774029.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|326443738|ref|ZP_08218472.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|197705760|gb|EDY51572.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|294327985|gb|EFG09628.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] Length = 302 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 115/261 (44%), Positives = 175/261 (67%), Gaps = 7/261 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT----KSA 240 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D+ K+A Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDSKPGDKAA 244 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 GE + + + LE D ++ E Sbjct: 245 GEPLAEWERDL-LEGDKKADE 264 >gi|281599523|gb|ADA72507.1| 30S ribosomal protein S2 [Shigella flexneri 2002017] Length = 307 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 112/226 (49%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V+R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIVSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 290 >gi|305680992|ref|ZP_07403799.1| ribosomal protein S2 [Corynebacterium matruchotii ATCC 14266] gi|305659197|gb|EFM48697.1| ribosomal protein S2 [Corynebacterium matruchotii ATCC 14266] Length = 296 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 161/220 (73%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL+SGV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDSGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDEAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + + E AKR VN +WLGGM+TN++TVS+ + ++++L+ + ++ Sbjct: 65 GTILYVGTKKQAQEPIQEEAKRIGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAMESEG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G TKKE L + R+R KL+R L GI +M +P ++VVDTN+E +A+ EA +L IP+V Sbjct: 125 GFEGRTKKEILMLTRERTKLERVLGGIAEMHKVPSALWVVDTNKEHIAVNEAHKLNIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A++DTN +PD+V+Y +PGNDD+ RSIA+ ++++A I+G Sbjct: 185 AILDTNCDPDVVNYPVPGNDDAIRSIAVLTRVISAAVIEG 224 >gi|225021112|ref|ZP_03710304.1| hypothetical protein CORMATOL_01124 [Corynebacterium matruchotii ATCC 33806] gi|224946112|gb|EEG27321.1| hypothetical protein CORMATOL_01124 [Corynebacterium matruchotii ATCC 33806] Length = 296 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 161/220 (73%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL+SGV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDSGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDEAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + + E AKR VN +WLGGM+TN++TVS+ + ++++L+ + ++ Sbjct: 65 GTILYVGTKKQAQEPIQEEAKRIGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAMESEG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G TKKE L + R+R KL+R L GI +M +P ++VVDTN+E +A+ EA +L IP+V Sbjct: 125 GFEGRTKKEILMLTRERTKLERVLGGIAEMHKVPSALWVVDTNKEHIAVNEAHKLNIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A++DTN +PD+V+Y +PGNDD+ RSIA+ ++++A I+G Sbjct: 185 AILDTNCDPDVVNYPVPGNDDAIRSIAVLTRVISAAVIEG 224 >gi|161524430|ref|YP_001579442.1| 30S ribosomal protein S2 [Burkholderia multivorans ATCC 17616] gi|160341859|gb|ABX14945.1| ribosomal protein S2 [Burkholderia multivorans ATCC 17616] Length = 309 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 158/222 (71%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 67 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANR 126 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 127 GTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAG 186 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 187 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 246 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 247 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRA 288 >gi|306836379|ref|ZP_07469357.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49726] gi|304567739|gb|EFM43326.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49726] Length = 298 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 112/241 (46%), Positives = 169/241 (70%), Gaps = 3/241 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 26 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 85 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + +E Sbjct: 86 GTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDERE 145 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A++EA +L IP+ Sbjct: 146 DGYKGRTKKEVLMLNRERAKLERVLGGISEMAKTPSALWIVDTNKEHIAVKEAHKLNIPV 205 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G AR+ + A ++AG++ Sbjct: 206 VAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEAAGDS 265 Query: 244 V 244 Sbjct: 266 A 266 >gi|126666180|ref|ZP_01737160.1| 30S ribosomal protein S2 [Marinobacter sp. ELB17] gi|126629502|gb|EBA00120.1| 30S ribosomal protein S2 [Marinobacter sp. ELB17] Length = 247 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM +YIF RN HII+L QTVP + AL+ ++ Sbjct: 1 MAQVHMRDLLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEQTVPAMNDALKFVARL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK A+ + E A+RS Q VN +WLGGM+TN+KT+ QSI + R+L+ + Sbjct: 61 TENKNKILFVGTKRAAAKIIKEEAERSGQPFVNHRWLGGMLTNYKTIRQSIHRYRELQAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+R++ GI+DMGGLPD +FV+D + E++AI+EA +L Sbjct: 121 SKDGTFDKLTKKEALERSREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNSNPD VDYVIPGNDD+ R+I ++ VA ++ + Sbjct: 181 IPVIGVVDTNSNPDGVDYVIPGNDDAIRAIQIYVKAVADTCLESV 225 >gi|54778755|gb|AAV39589.1| ribosomal protein S [synthetic construct] Length = 268 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 29 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 88 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 89 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 148 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 149 TFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 208 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 209 AIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 248 >gi|90580971|ref|ZP_01236772.1| 30S ribosomal protein S2 [Vibrio angustum S14] gi|90437849|gb|EAS63039.1| 30S ribosomal protein S2 [Vibrio angustum S14] Length = 242 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 113/214 (52%), Positives = 152/214 (71%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I AR Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNAALAEIEKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ + EAA QY VN++WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASESIKEAAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQSTDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD MFV+ + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIGADCEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 AVVDTNS+PD VD+VIPGNDD+ R+I L+ VA Sbjct: 185 AVVDTNSDPDGVDFVIPGNDDAIRAIQLYTGAVA 218 >gi|33357956|pdb|1P87|B Chain B, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754059|pdb|2AVY|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754115|pdb|2AW7|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138054|pdb|2I2P|B Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138125|pdb|2I2U|B Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|157836041|pdb|2QOU|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836095|pdb|2QOW|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836145|pdb|2QOY|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836199|pdb|2QP0|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429718|pdb|2QAL|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429770|pdb|2QAN|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429828|pdb|2QB9|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429880|pdb|2QBB|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429932|pdb|2QBD|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429984|pdb|2QBF|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430038|pdb|2QBH|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430091|pdb|2QBJ|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431391|pdb|2Z4K|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431444|pdb|2Z4M|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988789|pdb|2VHO|B Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 3 Of 4) gi|168988810|pdb|2VHP|B Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 4 Of 4) gi|197107298|pdb|3DF1|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The First 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107350|pdb|3DF3|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|329665993|pdb|3J00|B Chain B, Structure Of The Ribosome-Secye Complex In The Membrane Environment Length = 240 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 4 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 64 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 124 TFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 184 AIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 223 >gi|323526488|ref|YP_004228641.1| 30S ribosomal protein S2 [Burkholderia sp. CCGE1001] gi|323383490|gb|ADX55581.1| ribosomal protein S2 [Burkholderia sp. CCGE1001] Length = 250 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ETERMSKKEALLFEREMLKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGRA 225 >gi|59712569|ref|YP_205345.1| 30S ribosomal protein S2 [Vibrio fischeri ES114] gi|197336329|ref|YP_002156790.1| ribosomal protein S2 [Vibrio fischeri MJ11] gi|75506956|sp|Q5E3D9|RS2_VIBF1 RecName: Full=30S ribosomal protein S2 gi|238690250|sp|B5F9X6|RS2_VIBFM RecName: Full=30S ribosomal protein S2 gi|59480670|gb|AAW86457.1| 30S ribosomal subunit protein S2 [Vibrio fischeri ES114] gi|197317819|gb|ACH67266.1| ribosomal protein S2 [Vibrio fischeri MJ11] Length = 242 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM +AL ++ ++ Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNEALAELAKIGSKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+D E + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAINSDQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEVQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R +KL+++L GI++M GLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTRDMEKLEKSLGGIKNMNGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R+I L+ + A A G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADAVKSG 224 >gi|262278376|ref|ZP_06056161.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202] gi|262258727|gb|EEY77460.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202] Length = 250 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/240 (46%), Positives = 158/240 (65%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHESIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 240 >gi|188533036|ref|YP_001906833.1| 30S ribosomal protein S2 [Erwinia tasmaniensis Et1/99] gi|238689728|sp|B2VE05|RS2_ERWT9 RecName: Full=30S ribosomal protein S2 gi|188028078|emb|CAO95935.1| 30S ribosomal protein S2 [Erwinia tasmaniensis Et1/99] Length = 241 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELSKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVAATVREG 224 >gi|307729331|ref|YP_003906555.1| 30S ribosomal protein S2 [Burkholderia sp. CCGE1003] gi|307583866|gb|ADN57264.1| ribosomal protein S2 [Burkholderia sp. CCGE1003] Length = 250 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 64 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 124 ETERMSKKEALLFEREMLKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A Sbjct: 184 AVVDTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGRA 225 >gi|322831588|ref|YP_004211615.1| ribosomal protein S2 [Rahnella sp. Y9602] gi|321166789|gb|ADW72488.1| ribosomal protein S2 [Rahnella sp. Y9602] Length = 241 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELQKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEAAHNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFEKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 183 VFSIVDTNSDPDGVDFVIPGNDDAIRAVNLYLSAVAATVREG 224 >gi|197286131|ref|YP_002152003.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320] gi|227357250|ref|ZP_03841607.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906] gi|238690101|sp|B4F2D3|RS2_PROMH RecName: Full=30S ribosomal protein S2 gi|194683618|emb|CAR44518.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320] gi|227162513|gb|EEI47502.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906] Length = 241 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 155/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALVELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK A + V EAA+ Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 65 GKILFVGTKRSAVEAVKEAAESCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLES--QSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD +DY+IPGNDD+ R++ L+ A+A +G Sbjct: 183 VFAIVDTNSDPDGIDYIIPGNDDAIRAVKLYLTAAATAVREG 224 >gi|126173688|ref|YP_001049837.1| 30S ribosomal protein S2 [Shewanella baltica OS155] gi|152999977|ref|YP_001365658.1| 30S ribosomal protein S2 [Shewanella baltica OS185] gi|160874598|ref|YP_001553914.1| 30S ribosomal protein S2 [Shewanella baltica OS195] gi|217974060|ref|YP_002358811.1| 30S ribosomal protein S2 [Shewanella baltica OS223] gi|304409562|ref|ZP_07391182.1| ribosomal protein S2 [Shewanella baltica OS183] gi|307303920|ref|ZP_07583673.1| ribosomal protein S2 [Shewanella baltica BA175] gi|166226751|sp|A3D2K5|RS2_SHEB5 RecName: Full=30S ribosomal protein S2 gi|166226752|sp|A6WLA6|RS2_SHEB8 RecName: Full=30S ribosomal protein S2 gi|189044997|sp|A9KUK5|RS2_SHEB9 RecName: Full=30S ribosomal protein S2 gi|254764489|sp|B8E7R6|RS2_SHEB2 RecName: Full=30S ribosomal protein S2 gi|125996893|gb|ABN60968.1| SSU ribosomal protein S2P [Shewanella baltica OS155] gi|151364595|gb|ABS07595.1| ribosomal protein S2 [Shewanella baltica OS185] gi|160860120|gb|ABX48654.1| ribosomal protein S2 [Shewanella baltica OS195] gi|217499195|gb|ACK47388.1| ribosomal protein S2 [Shewanella baltica OS223] gi|304352080|gb|EFM16478.1| ribosomal protein S2 [Shewanella baltica OS183] gi|306912818|gb|EFN43241.1| ribosomal protein S2 [Shewanella baltica BA175] gi|315266839|gb|ADT93692.1| ribosomal protein S2 [Shewanella baltica OS678] Length = 242 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 108/220 (49%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A + + E+A Q+ V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 65 GKVLFVGTKRAAGEAIKESALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G Sbjct: 185 AVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAAKAG 224 >gi|113461231|ref|YP_719300.1| 30S ribosomal protein S2 [Haemophilus somnus 129PT] gi|170717230|ref|YP_001784349.1| 30S ribosomal protein S2 [Haemophilus somnus 2336] gi|122945346|sp|Q0I458|RS2_HAES1 RecName: Full=30S ribosomal protein S2 gi|189044941|sp|B0UTA0|RS2_HAES2 RecName: Full=30S ribosomal protein S2 gi|112823274|gb|ABI25363.1| SSU ribosomal protein S2P [Haemophilus somnus 129PT] gi|168825359|gb|ACA30730.1| ribosomal protein S2 [Haemophilus somnus 2336] Length = 239 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 113/224 (50%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNEALVELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + GRILFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGRILFVGTKRAASEVVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALVRTREMEKLELSLGGIKDMGGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD VD+VIPGNDD+SR+I L+ +A +G Sbjct: 181 IPVFAIVDTNSSPDGVDFVIPGNDDASRAIQLYLSAATTAVKEG 224 >gi|255020967|ref|ZP_05293022.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC 51756] gi|254969572|gb|EET27079.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC 51756] Length = 251 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 105/226 (46%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+ P ++R LLE+G FGH++ W+PKM YIF ERN HII+L T+PML+ AL + Sbjct: 1 MSSPNVSMRALLEAGAHFGHQSRYWHPKMAPYIFGERNRIHIINLEHTLPMLRTALAFLE 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + GR+LFV TK QA + + E A+R + VN +WLGG +TN+KT+ QS+++ +LE Sbjct: 61 QVSRKHGRVLFVGTKRQAREAIEEEARRCGAFYVNQRWLGGTLTNFKTIRQSLRRFEELE 120 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ ++ + TKKE L + R+R+KL+R+L GI+DM G+PD +FV+D E +A+ EA++ Sbjct: 121 QMSVDGTLEKLTKKEVLTLTREREKLERSLGGIKDMTGVPDALFVIDVGHENIAVAEAKK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V VVD+N +P +DY IPGNDD++R+I L+ L A A + G Sbjct: 181 LGIPVVGVVDSNCDPSPIDYPIPGNDDATRAIRLYASLAADAILAG 226 >gi|262379486|ref|ZP_06072642.1| ribosomal protein S2 [Acinetobacter radioresistens SH164] gi|262298943|gb|EEY86856.1| ribosomal protein S2 [Acinetobacter radioresistens SH164] Length = 248 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 111/240 (46%), Positives = 158/240 (65%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL +G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A I G S A K+ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKA 240 >gi|311694056|gb|ADP96929.1| 30S ribosomal protein S2 [marine bacterium HP15] Length = 245 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 112/230 (48%), Positives = 158/230 (68%), Gaps = 3/230 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM ++IF RN HII+L QTVP + AL+ + Sbjct: 1 MRDLLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNDALKFVQQLAENKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK A+ + E A+R+ Q VN +WLGGM+TN+KT+ QSI++ RDLE + + Sbjct: 61 KILFVGTKRAAAKIIKEEAERAGQPFVNHRWLGGMLTNYKTIRQSIRRYRDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L+ R+ D+L+R++ GI+DMGGLPD MFV+D + E++AI+EA +L IP++ Sbjct: 121 FDKLTKKEALDRTREMDRLERSIGGIKDMGGLPDAMFVIDVDHERIAIKEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 VVDTNS+PD VDYVIPGNDD+ R+I ++ VA ++ A Q + GAD Sbjct: 181 VVDTNSDPDGVDYVIPGNDDAIRAIQIYVKAVADTCME--AAQSAGAGAD 228 >gi|86146890|ref|ZP_01065209.1| 30S ribosomal protein S2 [Vibrio sp. MED222] gi|85835342|gb|EAQ53481.1| 30S ribosomal protein S2 [Vibrio sp. MED222] Length = 243 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I+ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEIAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VD+VIPGNDD+ R++ L+ + A A +G Sbjct: 185 AVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAAADAVKEG 224 >gi|331680748|ref|ZP_08381407.1| ribosomal protein S2 [Escherichia coli H591] gi|331072211|gb|EGI43547.1| ribosomal protein S2 [Escherichia coli H591] Length = 306 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 64 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 123 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 124 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 183 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 184 TQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 243 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 244 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 289 >gi|332282843|ref|ZP_08395256.1| 30S ribosomal protein S2 [Shigella sp. D9] gi|332105195|gb|EGJ08541.1| 30S ribosomal protein S2 [Shigella sp. D9] Length = 307 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 290 >gi|322436645|ref|YP_004218857.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX9] gi|321164372|gb|ADW70077.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX9] Length = 313 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 159/225 (70%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M ++A + ++D Sbjct: 1 MANITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVTDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA D V E A R+ +NS+WLGG++TNW TV +S+++L++L+++ Sbjct: 61 TSTGKLILFVGTKRQAQDAVAEEATRAGMPYINSRWLGGLLTNWVTVQKSVKRLQELDDM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + +ER+R L L GI+ M LPD +FV+D+N E +A+ EAR+L Sbjct: 121 STDGRYELLTKKEVIKLERERKHLATNLSGIKAMKRLPDALFVIDSNNEAIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A +A +G+ Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTMKMADSAAEGV 225 >gi|239928672|ref|ZP_04685625.1| 30S ribosomal protein S2 [Streptomyces ghanaensis ATCC 14672] gi|291436996|ref|ZP_06576386.1| 30S ribosomal protein S2 [Streptomyces ghanaensis ATCC 14672] gi|291339891|gb|EFE66847.1| 30S ribosomal protein S2 [Streptomyces ghanaensis ATCC 14672] Length = 293 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 113/240 (47%), Positives = 168/240 (70%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VASSGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQH-SYMGADTKSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATEGKGEKAAGE 244 >gi|149190033|ref|ZP_01868310.1| 30S ribosomal protein S2 [Vibrio shilonii AK1] gi|148836063|gb|EDL53023.1| 30S ribosomal protein S2 [Vibrio shilonii AK1] Length = 243 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 109/220 (49%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALAELAKIGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA + Q+ VN++WLGGM+TN+KTV QSI++L+D E + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAINADQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDYVIPGNDD+ R++ L+ + A A +G Sbjct: 185 AVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADAVKEG 224 >gi|33592517|ref|NP_880161.1| 30S ribosomal protein S2 [Bordetella pertussis Tohama I] gi|33596174|ref|NP_883817.1| 30S ribosomal protein S2 [Bordetella parapertussis 12822] gi|33601582|ref|NP_889142.1| 30S ribosomal protein S2 [Bordetella bronchiseptica RB50] gi|61215727|sp|Q7VYD0|RS2_BORPE RecName: Full=30S ribosomal protein S2 gi|61215733|sp|Q7WA60|RS2_BORPA RecName: Full=30S ribosomal protein S2 gi|61215734|sp|Q7WJ94|RS2_BORBR RecName: Full=30S ribosomal protein S2 gi|33572163|emb|CAE41709.1| 30S ribosomal protein S2 [Bordetella pertussis Tohama I] gi|33573177|emb|CAE36829.1| 30S ribosomal protein S2 [Bordetella parapertussis] gi|33576018|emb|CAE33098.1| 30S ribosomal protein S2 [Bordetella bronchiseptica RB50] gi|332381935|gb|AEE66782.1| 30S ribosomal protein S2 [Bordetella pertussis CS] Length = 249 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 112/221 (50%), Positives = 155/221 (70%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L QTV Q+A + + VARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + V A R V+++WLGGM+TN+KTV SI++L+D+E ++ + Sbjct: 64 NILFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMV--AD 121 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 GF TKKE L +R+ DKL +++ GI+DM GLPD +FV+D K+A+ EA+ L IP+ Sbjct: 122 GGFERMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VAVVDTN +PD +D+VIPGNDDS+R+IAL+ +A A ++G Sbjct: 182 VAVVDTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEG 222 >gi|292489228|ref|YP_003532115.1| 30S ribosomal protein S2 [Erwinia amylovora CFBP1430] gi|292898539|ref|YP_003537908.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC 49946] gi|291198387|emb|CBJ45494.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC 49946] gi|291554662|emb|CBA22357.1| 30S ribosomal protein S2 [Erwinia amylovora CFBP1430] gi|312173389|emb|CBX81643.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC BAA-2158] Length = 241 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVAATVREG 224 >gi|239982583|ref|ZP_04705107.1| 30S ribosomal protein S2 [Streptomyces albus J1074] gi|291454426|ref|ZP_06593816.1| 30S ribosomal protein S2 [Streptomyces albus J1074] gi|291357375|gb|EFE84277.1| 30S ribosomal protein S2 [Streptomyces albus J1074] Length = 312 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 110/242 (45%), Positives = 166/242 (68%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT----KSA 240 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D+ K+A Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDSKPGDKAA 244 Query: 241 GE 242 GE Sbjct: 245 GE 246 >gi|25028471|ref|NP_738525.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] gi|259507530|ref|ZP_05750430.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] gi|38258379|sp|Q8FP70|RS2_COREF RecName: Full=30S ribosomal protein S2 gi|23493756|dbj|BAC18725.1| putative 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] gi|259164915|gb|EEW49469.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] Length = 276 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 109/239 (45%), Positives = 168/239 (70%), Gaps = 3/239 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDQAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GTILFVGTKKQAQEAVQVEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TK+E L + R+R KL+R L GI DM +P ++++DTN+E +A+ EA +L IP+ Sbjct: 125 DGYEGRTKRETLMLTRERVKLERVLSGIADMSRIPSALWIIDTNKEHIAVAEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 VA++DTN +PD+VDY +PGNDD+ R+ AL ++++A +G AR+ + A ++AGE Sbjct: 185 VAILDTNCDPDVVDYPVPGNDDAIRATALLSRVISTAVEEGKKAREERQLAAAREAAGE 243 >gi|330718873|ref|ZP_08313473.1| 30S ribosomal protein S2 [Leuconostoc fallax KCTC 3537] Length = 258 Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 109/227 (48%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE+GV FGH+ WNPKM+ +IF ERN HIIDL +TV + +A + + Sbjct: 4 ISMKELLEAGVHFGHQTRRWNPKMDEFIFTERNGIHIIDLQKTVKLADEAYNFVRNASTD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA+D + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 64 GANILFVGTKKQAADAIAEEATRAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEVMAED 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + + ++ KL++ L GI+DM GLPD++FVVD N+E++AI+EAR L IP+ Sbjct: 124 GTFDALPKKEVVLLNKQHAKLEKFLGGIKDMPGLPDVLFVVDPNKEEIAIKEARSLNIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTNSNPDLVD IP NDD+ R++ L +A A I+G Q S Sbjct: 184 VAMIDTNSNPDLVDVKIPANDDAIRAVRLITSKMADAVIEGRQGQDS 230 >gi|312966304|ref|ZP_07780530.1| ribosomal protein S2 [Escherichia coli 2362-75] gi|116667411|pdb|2GY9|B Chain B, Structure Of The 30s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667463|pdb|2GYB|B Chain B, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|312289547|gb|EFR17441.1| ribosomal protein S2 [Escherichia coli 2362-75] gi|323190432|gb|EFZ75707.1| ribosomal protein S2 [Escherichia coli RN587/1] gi|327255147|gb|EGE66750.1| ribosomal protein S2 [Escherichia coli STEC_7v] gi|332098196|gb|EGJ03169.1| ribosomal protein S2 [Shigella dysenteriae 155-74] Length = 236 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 111/219 (50%), Positives = 155/219 (70%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 219 >gi|87118627|ref|ZP_01074526.1| 30S ribosomal protein S2 [Marinomonas sp. MED121] gi|86166261|gb|EAQ67527.1| 30S ribosomal protein S2 [Marinomonas sp. MED121] Length = 245 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 114/243 (46%), Positives = 161/243 (66%), Gaps = 8/243 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R LL+ G FGH+ WNPKM+ +IF RN HII+L TVP L +AL+++ Sbjct: 1 MPTVSMRDLLQVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNEALELVKKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++LFV TK AS + E A+RS+ VN +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AENKNKVLFVGTKRAASKTMKEQAQRSSMPYVNHRWLGGMLTNYKTIRASIKRLRDLETQ 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +N + TKKE L R+ +KL+ ++ GI+DMGGLPD++FVVD + E++AI+EA +L Sbjct: 121 MNDGTFEKITKKEALMRTRELEKLELSIGGIKDMGGLPDILFVVDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNSNPD +DYVIP NDD+ R++ L+ A A ++G GA SA Sbjct: 181 IPVIGVVDTNSNPDGIDYVIPANDDAIRAVQLYVTAFADAVLEG-------RGAAAGSAD 233 Query: 242 ETV 244 E V Sbjct: 234 EFV 236 >gi|332799208|ref|YP_004460707.1| 30S ribosomal protein S2 [Tepidanaerobacter sp. Re1] gi|332696943|gb|AEE91400.1| ribosomal protein S2 [Tepidanaerobacter sp. Re1] Length = 233 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 111/235 (47%), Positives = 164/235 (69%), Gaps = 9/235 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV +++A + + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVKKIEEAYEFVKNISAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + E A+R + VN +WLGGM+TN+KT+ + I +L +LE++ Sbjct: 64 GGSILFVGTKKQAQESIQEEAQRCGMFYVNQRWLGGMLTNFKTIRKRIDRLHELEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE LN+ ++++L++ L GI+DM LP +F+VD +E++AIQEAR+L+ Sbjct: 121 EEDGLFEILPKKEVLNLLHEKERLEKNLGGIKDMTELPQAVFIVDPRKERIAIQEARKLQ 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+A+VDTN +PD VDY+IPGNDD+ R++ L + +A A I+G RQ M A+ Sbjct: 181 IPIIAIVDTNCDPDEVDYIIPGNDDAIRAVKLLTEKIADAVIEG--RQGEQMEAE 233 >gi|332095210|gb|EGJ00239.1| ribosomal protein S2 [Shigella boydii 5216-82] Length = 236 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 111/219 (50%), Positives = 155/219 (70%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 219 >gi|269138093|ref|YP_003294793.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202] gi|267983753|gb|ACY83582.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202] gi|304558137|gb|ADM40801.1| SSU ribosomal protein S2p (SAe) [Edwardsiella tarda FL6-60] Length = 236 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 112/219 (51%), Positives = 153/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL +S +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ + Sbjct: 121 FDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA A +G Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREG 219 >gi|318056581|ref|ZP_07975304.1| 30S ribosomal protein S2 [Streptomyces sp. SA3_actG] gi|318075682|ref|ZP_07983014.1| 30S ribosomal protein S2 [Streptomyces sp. SA3_actF] Length = 307 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 113/242 (46%), Positives = 167/242 (69%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKSA 240 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+A Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKAA 244 Query: 241 GE 242 GE Sbjct: 245 GE 246 >gi|302522175|ref|ZP_07274517.1| ribosomal protein S2 [Streptomyces sp. SPB78] gi|333024155|ref|ZP_08452219.1| putative 30S ribosomal protein S2 [Streptomyces sp. Tu6071] gi|302431070|gb|EFL02886.1| ribosomal protein S2 [Streptomyces sp. SPB78] gi|332744007|gb|EGJ74448.1| putative 30S ribosomal protein S2 [Streptomyces sp. Tu6071] Length = 302 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 113/242 (46%), Positives = 167/242 (69%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKSA 240 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+A Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKAA 244 Query: 241 GE 242 GE Sbjct: 245 GE 246 >gi|297191776|ref|ZP_06909174.1| 30S ribosomal protein S2 [Streptomyces pristinaespiralis ATCC 25486] gi|197721706|gb|EDY65614.1| 30S ribosomal protein S2 [Streptomyces pristinaespiralis ATCC 25486] Length = 301 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 111/242 (45%), Positives = 166/242 (68%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLHIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT----KSA 240 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D+ K+A Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDSKPGEKAA 244 Query: 241 GE 242 GE Sbjct: 245 GE 246 >gi|56478851|ref|YP_160440.1| 30S ribosomal protein S2 [Aromatoleum aromaticum EbN1] gi|61215383|sp|Q5NZH5|RS2_AZOSE RecName: Full=30S ribosomal protein S2 gi|56314894|emb|CAI09539.1| 30S ribosomal protein S2 [Aromatoleum aromaticum EbN1] Length = 251 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNP+M YIF +RN HI++L +T+ +A+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMGKYNEAMNYVRKLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V E A R+ V+ +WLGGM+TN+KTV QSI++L+++E ++ Sbjct: 64 GTILLVGTKRQAREIVSEEASRAGMPFVDERWLGGMLTNFKTVKQSIKRLKEMEAMVEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + +KKE L R+ DKLK+++ GI+DMGGLPD MFV+D K+AI EA++L IPIV Sbjct: 124 SIERLSKKEALMATREMDKLKKSIGGIKDMGGLPDAMFVIDVGYHKIAITEAQKLGIPIV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +P+ +DYVIPGNDDSSR+I L+ VA A ++G Sbjct: 184 AVVDTNHSPEGIDYVIPGNDDSSRAIRLYARGVADAVLEG 223 >gi|299769325|ref|YP_003731351.1| 30S ribosomal protein S2 [Acinetobacter sp. DR1] gi|298699413|gb|ADI89978.1| 30S ribosomal protein S2 [Acinetobacter sp. DR1] gi|325122880|gb|ADY82403.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus PHEA-2] Length = 250 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 165/243 (67%), Gaps = 3/243 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G ++++ A+ ++ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQA 238 Query: 240 AGE 242 G+ Sbjct: 239 KGD 241 >gi|6226896|sp|O31212|RS2_STRCO RecName: Full=30S ribosomal protein S2 gi|4335681|gb|AAC00175.2| ribosomal protein S2 [Streptomyces coelicolor A3(2)] Length = 310 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 113/240 (47%), Positives = 168/240 (70%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADT-KSAGE 242 VA++DTN +PD VD+ IPGNDD+ RS+ L ++A A +G IAR + GA K+AGE Sbjct: 185 VAILDTNCDPDEVDHKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAGGAKGDKAAGE 244 >gi|169632956|ref|YP_001706692.1| 30S ribosomal protein S2 [Acinetobacter baumannii SDF] gi|169795290|ref|YP_001713083.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE] gi|184158845|ref|YP_001847184.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU] gi|213158045|ref|YP_002320096.1| ribosomal protein S2 [Acinetobacter baumannii AB0057] gi|215482823|ref|YP_002325026.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294] gi|239502457|ref|ZP_04661767.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB900] gi|260554200|ref|ZP_05826457.1| ribosomal protein S2 [Acinetobacter sp. RUH2624] gi|260556753|ref|ZP_05828971.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606] gi|301345999|ref|ZP_07226740.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB056] gi|301513133|ref|ZP_07238370.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB058] gi|301595621|ref|ZP_07240629.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB059] gi|169148217|emb|CAM86080.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE] gi|169151748|emb|CAP00552.1| 30S ribosomal protein S2 [Acinetobacter baumannii] gi|183210439|gb|ACC57837.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU] gi|213057205|gb|ACJ42107.1| ribosomal protein S2 [Acinetobacter baumannii AB0057] gi|213986068|gb|ACJ56367.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294] gi|260404671|gb|EEW98184.1| ribosomal protein S2 [Acinetobacter sp. RUH2624] gi|260410012|gb|EEX03312.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606] gi|322507343|gb|ADX02797.1| rpsB [Acinetobacter baumannii 1656-2] gi|323518758|gb|ADX93139.1| 30S ribosomal protein S2 [Acinetobacter baumannii TCDC-AB0715] Length = 250 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 165/243 (67%), Gaps = 3/243 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G ++++ A+ ++ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQA 238 Query: 240 AGE 242 G+ Sbjct: 239 KGD 241 >gi|218962147|ref|YP_001741922.1| 30S ribosomal subunit protein S2 [Candidatus Cloacamonas acidaminovorans] gi|167730804|emb|CAO81716.1| 30S ribosomal subunit protein S2 [Candidatus Cloacamonas acidaminovorans] Length = 290 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 160/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ F WNPKM++YIF +RN HIIDL QTV + +A Q + + ++G Sbjct: 22 TMKQLLEAGVHFGHQTFKWNPKMKKYIFIKRNGIHIIDLKQTVDAINEAYQFMKEVASKG 81 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 ILFV TK QA + EAA+++ + VN +W GGM+TN T+ QSI+K++ EE++ + Sbjct: 82 EYILFVGTKKQAQAAIKEAAEKAGVFYVNQRWYGGMLTNMATIRQSIEKMKYYEEIVADG 141 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 G+TK E+ ++R DK++ +L GIR+M LP +F+VDT EK+A+ EAR L IPIV Sbjct: 142 TINGYTKLEQQKMKRMHDKIEFSLGGIREMDALPGCVFIVDTEYEKIAVHEARILNIPIV 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTN +PDL+DYVIP NDD++R+I L D++A+A I+G Sbjct: 202 AMVDTNCDPDLIDYVIPSNDDATRAIHLISDIMANAVIEG 241 >gi|254252059|ref|ZP_04945377.1| ribosomal protein S2 [Burkholderia dolosa AUO158] gi|124894668|gb|EAY68548.1| ribosomal protein S2 [Burkholderia dolosa AUO158] Length = 318 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 76 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANR 135 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 136 GTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAG 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P++ Sbjct: 196 ELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVI 255 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +P+ VDYVIPGNDDSS+++AL+ +A A ++G A Sbjct: 256 AVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGIADAILEGRA 297 >gi|326794435|ref|YP_004312255.1| ribosomal protein S2 [Marinomonas mediterranea MMB-1] gi|326545199|gb|ADZ90419.1| ribosomal protein S2 [Marinomonas mediterranea MMB-1] Length = 244 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 154/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R LL+ G FGH+ WNPKM+ +IF RN HII+L TVP L +AL ++ Sbjct: 1 MPTVSMRDLLQVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNEALALVKKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++LFV TK A+ + E A RS+ VN +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 TENKNKVLFVGTKRAAAKSIKEQAARSSMPYVNHRWLGGMLTNYKTIRASIKRLRDLENQ 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +N + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E++AI+EA +L Sbjct: 121 MNDGTFEKLTKKEALMRTRELEKLELSLGGIKDMGGLPDALFVVDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ +VDTNSNPD +DYVIP NDD+ R++ L+ A AA++G A Sbjct: 181 IPVIGIVDTNSNPDGIDYVIPANDDAIRAVQLYVSAFADAALEGRA 226 >gi|290473657|ref|YP_003466529.1| 30S ribosomal subunit protein S2 [Xenorhabdus bovienii SS-2004] gi|289172962|emb|CBJ79733.1| 30S ribosomal subunit protein S2 [Xenorhabdus bovienii SS-2004] Length = 241 Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNSALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK A + + E A QY VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAACEAIKEEALGCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLE--VQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD VD++IPGNDD+ R++ L+ VA+A DG Sbjct: 183 VFAIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVRDG 224 >gi|300869880|ref|YP_003784751.1| 30S ribosomal protein S2 [Brachyspira pilosicoli 95/1000] gi|300687579|gb|ADK30250.1| 30S ribosomal protein S2 [Brachyspira pilosicoli 95/1000] Length = 273 Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 114/243 (46%), Positives = 167/243 (68%), Gaps = 3/243 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP ++ LLE+GV FGH+ WNPKM+ +IF ERN+ HIIDL +T+ ++KA + Sbjct: 3 MSLP--AMKDLLEAGVHFGHQTRKWNPKMKPFIFQERNDIHIIDLMKTLTYVKKAYDAVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + GG ILFV TK QAS + EAA++ Y VN++WLGGM+TN+ T+ +SI +L+ +E Sbjct: 61 EMSRNGGNILFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIE 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E ++ KKE + + +++DKL++ GI+DM LPD++FV+D +E +A+ EAR+ Sbjct: 121 KEEVDGTFDKLPKKEVILLLKEKDKLEKNFAGIKDMENLPDMIFVIDPMQEHIAVSEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVDTN NP+L+DY IPGNDD+ R+I+LF +++SA IDG A +S Sbjct: 181 LGIPVVAVVDTNCNPELIDYPIPGNDDAIRAISLFAGVISSAIIDGQNEAGKETLAKHES 240 Query: 240 AGE 242 GE Sbjct: 241 TGE 243 >gi|134102476|ref|YP_001108137.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338] gi|291004133|ref|ZP_06562106.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338] gi|133915099|emb|CAM05212.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338] Length = 274 Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 119/242 (49%), Positives = 163/242 (67%), Gaps = 9/242 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + A + TVA G Sbjct: 5 TMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDGAYDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L++LE + ++ Sbjct: 65 GTILFVGTKKQAQEAIAEQALRVGMPFVNQRWLGGMLTNFQTVHKRLQRLKELETM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREKDKLEKTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGA---DTKS 239 +VA++DTN +PD VDY IPGNDD+ RS AL +VA DG+ AR GA + K Sbjct: 183 VVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADGVADGLMARSGRTNGAAEGEEKP 242 Query: 240 AG 241 AG Sbjct: 243 AG 244 >gi|119946597|ref|YP_944277.1| ribosomal protein S2 [Psychromonas ingrahamii 37] gi|166226744|sp|A1SYW3|RS2_PSYIN RecName: Full=30S ribosomal protein S2 gi|119865201|gb|ABM04678.1| SSU ribosomal protein S2P [Psychromonas ingrahamii 37] Length = 244 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 156/221 (70%), Gaps = 5/221 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL + Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNSALDFLEQK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G++LFV TK ASD V EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AAKKGKVLFVGTKRAASDAVKEAAISCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + ++ F TKKE L + R+ +KL + L GI++MGG+PD++FV+D + E +AI+EA Sbjct: 119 VQSQDGTFDKVTKKEALMLARELEKLDKTLGGIKNMGGIPDVIFVIDADHEHIAIKEANN 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 L IP++++VDTNS PD +DYV+PGNDD+ R+I L+ + A+ Sbjct: 179 LGIPVISIVDTNSCPDNIDYVVPGNDDAIRAIKLYLEAAAT 219 >gi|90415793|ref|ZP_01223726.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2207] gi|90332167|gb|EAS47364.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2207] Length = 265 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM ++IF RN H+I+L QTVP +AL+V+ A+G Sbjct: 1 MRDMLQAGVHFGHQTRFWNPKMSKFIFGSRNKVHVINLEQTVPAFNEALEVLRKEAAKGN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK A + E A+R V+ +WLGGM+TN+KT+ SI++ RDLE + N Sbjct: 61 QILFVGTKRAAQKILKEEAERCGMPYVSHRWLGGMLTNYKTIRASIRRFRDLETQEANGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R ++KL+ ++ GI+DM GLPD++FV+D + E++AI EA +L IP+V Sbjct: 121 FERLTKKEVLMRTRMKEKLENSIGGIKDMNGLPDILFVIDVDHERIAINEANKLGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +VDTNSNPD VDYVIPGNDDS R+I L+ +A+ ++G A+ Sbjct: 181 IVDTNSNPDGVDYVIPGNDDSIRAIKLYAASIANTVLEGKAQ 222 >gi|257055041|ref|YP_003132873.1| 30S ribosomal protein S2P [Saccharomonospora viridis DSM 43017] gi|256584913|gb|ACU96046.1| SSU ribosomal protein S2P [Saccharomonospora viridis DSM 43017] Length = 278 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 109/213 (51%), Positives = 150/213 (70%), Gaps = 1/213 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A R VN +WLGGM+TN++TV + +Q+L++LE Sbjct: 65 GTILFVGTKKQAQEAIATEAGRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELEAQEQTG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 QG TK+E L + R++DKL+R L GIRDM +P +++VDT +E +A+ EAR+L IPIV Sbjct: 125 GFQGLTKREILTLTREKDKLERTLGGIRDMSKVPSAVWIVDTKKEHIAVNEARKLNIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 A++DTN +PD VDY IPGNDD+ RS AL +V Sbjct: 185 AILDTNCDPDEVDYPIPGNDDAIRSAALLTKVV 217 >gi|332701339|ref|ZP_08421427.1| ribosomal protein S2 [Desulfovibrio africanus str. Walvis Bay] gi|332551488|gb|EGJ48532.1| ribosomal protein S2 [Desulfovibrio africanus str. Walvis Bay] Length = 263 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 157/223 (70%), Gaps = 1/223 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV + + A I+D+VA G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVGLFRTAHDFIADSVAAG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +FV TK QA + + A+R+ QY + ++WLGG +TN++T+S+SI++L+ LE + Sbjct: 65 GSCIFVGTKRQAQEAIKTEAERAGQYYITNRWLGGTLTNFQTISKSIERLKKLEAMFEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++KKE + R+ KL L GI+++ GLP + FV+D NRE++A++E R+L IPIV Sbjct: 125 TINRYSKKEISRMSREMGKLSGDLGGIKNLEGLPSVAFVIDPNREEIAVKECRKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 AVVDTN +PDL+DYVIPGNDD+ R+I LF +A A ++G AR Sbjct: 185 AVVDTNCDPDLIDYVIPGNDDAIRAIKLFVTAMADACVEGKAR 227 >gi|295836274|ref|ZP_06823207.1| ribosomal protein S2 [Streptomyces sp. SPB74] gi|197697361|gb|EDY44294.1| ribosomal protein S2 [Streptomyces sp. SPB74] Length = 302 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 113/242 (46%), Positives = 167/242 (69%), Gaps = 6/242 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG---ADTKSA 240 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + G K+A Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPGEKAA 244 Query: 241 GE 242 GE Sbjct: 245 GE 246 >gi|218710318|ref|YP_002417939.1| 30S ribosomal protein S2 [Vibrio splendidus LGP32] gi|218323337|emb|CAV19514.1| ribosomal protein S2 [Vibrio splendidus LGP32] Length = 254 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I+ + Sbjct: 16 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEIAKVGEKK 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 76 GKVLFVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDG 135 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L IP+ Sbjct: 136 TFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVY 195 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VD+VIPGNDD+ R++ L+ + A A +G Sbjct: 196 AVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAAADAVKEG 235 >gi|270264820|ref|ZP_06193084.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13] gi|270041118|gb|EFA14218.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13] Length = 241 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMANAALAELTKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEYANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLTAVAAAVREG 224 >gi|118496840|ref|YP_897890.1| 30S ribosomal protein S2 [Francisella tularensis subsp. novicida U112] gi|194324476|ref|ZP_03058248.1| ribosomal protein S2 [Francisella tularensis subsp. novicida FTE] gi|166225272|sp|A0Q4H1|RS2_FRATN RecName: Full=30S ribosomal protein S2 gi|118422746|gb|ABK89136.1| 30S ribosomal protein S2 [Francisella novicida U112] gi|194321311|gb|EDX18797.1| ribosomal protein S2 [Francisella tularensis subsp. novicida FTE] Length = 239 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 153/218 (70%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|297571167|ref|YP_003696941.1| ribosomal protein S2 [Arcanobacterium haemolyticum DSM 20595] gi|296931514|gb|ADH92322.1| ribosomal protein S2 [Arcanobacterium haemolyticum DSM 20595] Length = 271 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 113/222 (50%), Positives = 157/222 (70%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++RQLLE+GV FGH+ WNPKM+R+I ERN +IIDL +TV + K + + +TVA G Sbjct: 5 SMRQLLEAGVHFGHQTRRWNPKMKRFILTERNGIYIIDLRKTVEDINKTYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + E A+R VN +WLGGM+TN+ TV+ IQ+L++LE + + Sbjct: 65 GNILFVGTKRQAQQPIREQAERVGMPYVNERWLGGMLTNFTTVASRIQRLKELEIIDFDD 124 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G FTKKE L + R+++KL+R L GIRDM +P +++VDTN+E LA+ EA++L IP+ Sbjct: 125 VAGSKFTKKELLMMRREKEKLERTLGGIRDMAKVPSAIWIVDTNKEHLAVAEAKKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VAV+DTN +PD VDY IPGNDD+ RSI + +VA A +G+ Sbjct: 185 VAVLDTNCDPDSVDYGIPGNDDAIRSIEILTRVVADAVAEGL 226 >gi|134302597|ref|YP_001122568.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis WY96-3418] gi|208780543|ref|ZP_03247882.1| ribosomal protein S2 [Francisella novicida FTG] gi|254372204|ref|ZP_04987696.1| ribosomal protein S2 [Francisella tularensis subsp. novicida GA99-3549] gi|254373687|ref|ZP_04989171.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548] gi|166225273|sp|A4IZU6|RS2_FRATW RecName: Full=30S ribosomal protein S2 gi|134050374|gb|ABO47445.1| ribosomal protein S2 [Francisella tularensis subsp. tularensis WY96-3418] gi|151569934|gb|EDN35588.1| ribosomal protein S2 [Francisella novicida GA99-3549] gi|151571409|gb|EDN37063.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548] gi|208743518|gb|EDZ89823.1| ribosomal protein S2 [Francisella novicida FTG] gi|328676309|gb|AEB27179.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida Fx1] Length = 239 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 153/218 (70%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|269101939|ref|ZP_06154636.1| SSU ribosomal protein S2p (SAe) [Photobacterium damselae subsp. damselae CIP 102761] gi|268161837|gb|EEZ40333.1| SSU ribosomal protein S2p (SAe) [Photobacterium damselae subsp. damselae CIP 102761] Length = 241 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 114/220 (51%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I+ AR Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAEINKIAARK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA QY VN++WLGGM+TN+KTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAINCDQYYVNNRWLGGMLTNYKTVRQSIKRLKDLETQSTDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD +FVV + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAIFVVGADCEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN++PD VD+VIPGNDD+ R+I L+ VA A +G Sbjct: 185 AVVDTNADPDGVDFVIPGNDDAIRAIQLYTGAVAQAVNEG 224 >gi|331640623|ref|ZP_08341771.1| ribosomal protein S2 [Escherichia coli H736] gi|331671677|ref|ZP_08372475.1| ribosomal protein S2 [Escherichia coli TA280] gi|331040369|gb|EGI12576.1| ribosomal protein S2 [Escherichia coli H736] gi|331071522|gb|EGI42879.1| ribosomal protein S2 [Escherichia coli TA280] Length = 306 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 64 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 123 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 124 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 183 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 184 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 243 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 244 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 289 >gi|262184373|ref|ZP_06043794.1| 30S ribosomal protein S2 [Corynebacterium aurimucosum ATCC 700975] Length = 275 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 169/240 (70%), Gaps = 3/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + E Sbjct: 65 GTILFVGTKKQAQEAVAEEASRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA++L IP+ Sbjct: 125 DGYKGRTKKEVLMLTRERTKLERVLGGISDMTKAPSALWIVDTNKEHIAVKEAQKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VD+ IPGNDD+ R+ L ++A+A +G AR+ + ++AG+T Sbjct: 185 VAILDTNCDPDEVDFPIPGNDDAIRATKLLSGIIATAVDEGKKAREERQLAQAKEAAGDT 244 >gi|307822430|ref|ZP_07652662.1| ribosomal protein S2 [Methylobacter tundripaludum SV96] gi|307736996|gb|EFO07841.1| ribosomal protein S2 [Methylobacter tundripaludum SV96] Length = 245 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 153/220 (69%), Gaps = 2/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++RQ+LE+GV FGH+ WNPKM Y+F RN HIIDL +T+PM A+ + A Sbjct: 5 SMRQMLEAGVHFGHQTRYWNPKMATYLFGSRNKIHIIDLEKTLPMFNDAMNYLGQMTANK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK A V E A R VN +WLGGM+TN+KT+ +SI +L++LE + Sbjct: 65 GTVLFVGTKKAARKVVAEEAARCGMPYVNHRWLGGMLTNFKTIKKSINRLKELEAMKADG 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 Q F KKE L +ER+ +KL+R+L GI+DM G+PD++F++D EK AI EA++L IP+ Sbjct: 125 TLYQRFAKKEALGMERELEKLERSLGGIKDMKGVPDVIFILDVGYEKNAISEAKKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 V +VD+N++P+ +DY+IPGNDDS R++ L+C+ V++A ++ Sbjct: 185 VGIVDSNNSPEKIDYIIPGNDDSIRAVKLYCESVSAAVME 224 >gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 [Escherichia coli CFT073] gi|91070812|gb|ABE05693.1| 30S ribosomal protein S2 [Escherichia coli UTI89] Length = 307 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 290 >gi|227833386|ref|YP_002835093.1| 30S ribosomal protein S2 [Corynebacterium aurimucosum ATCC 700975] gi|227454402|gb|ACP33155.1| 30S ribosomal protein S2 [Corynebacterium aurimucosum ATCC 700975] Length = 305 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 169/240 (70%), Gaps = 3/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 35 TMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKETVAHG 94 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + E Sbjct: 95 GTILFVGTKKQAQEAVAEEASRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDAAE 154 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA++L IP+ Sbjct: 155 DGYKGRTKKEVLMLTRERTKLERVLGGISDMTKAPSALWIVDTNKEHIAVKEAQKLNIPV 214 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VD+ IPGNDD+ R+ L ++A+A +G AR+ + ++AG+T Sbjct: 215 VAILDTNCDPDEVDFPIPGNDDAIRATKLLSGIIATAVDEGKKAREERQLAQAKEAAGDT 274 >gi|310764950|gb|ADP09900.1| 30S ribosomal protein S2 [Erwinia sp. Ejp617] Length = 236 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/221 (50%), Positives = 156/221 (70%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R G Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + ++ Sbjct: 61 KILFVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQD 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ Sbjct: 119 GTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G Sbjct: 179 FSIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVATTVREG 219 >gi|293609659|ref|ZP_06691961.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828111|gb|EFF86474.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 267 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 165/243 (67%), Gaps = 3/243 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 18 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 78 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 137 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 138 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 197 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G ++++ A+ ++ Sbjct: 198 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQA 255 Query: 240 AGE 242 G+ Sbjct: 256 KGD 258 >gi|332289927|ref|YP_004420779.1| 30S ribosomal protein S2 [Gallibacterium anatis UMN179] gi|330432823|gb|AEC17882.1| 30S ribosomal protein S2 [Gallibacterium anatis UMN179] Length = 249 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 113/227 (49%), Positives = 155/227 (68%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL+ + Sbjct: 1 MAQVTMREMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTLPMFNAALEELKRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 G+ILFV TK A+D V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 AQNNGKILFVGTKRAATDPVQAAALDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKDMGGLPDALFVIAADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+ A+VDTNS+PD VDYVIPGNDD+ R+I L+ A A +G A+ Sbjct: 181 IPVFAIVDTNSDPDGVDYVIPGNDDAVRAIQLYLTAAADAVKEGKAQ 227 >gi|331651074|ref|ZP_08352102.1| ribosomal protein S2 [Escherichia coli M718] gi|331051528|gb|EGI23577.1| ribosomal protein S2 [Escherichia coli M718] Length = 306 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 64 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 123 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 124 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 183 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 184 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 243 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 244 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 289 >gi|297202663|ref|ZP_06920060.1| ribosomal protein S2 [Streptomyces sviceus ATCC 29083] gi|197713238|gb|EDY57272.1| ribosomal protein S2 [Streptomyces sviceus ATCC 29083] Length = 308 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 165/240 (68%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--KSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSRVATGDKGEKAAGE 244 >gi|189425764|ref|YP_001952941.1| 30S ribosomal protein S2 [Geobacter lovleyi SZ] gi|238692130|sp|B3E716|RS2_GEOLS RecName: Full=30S ribosomal protein S2 gi|189422023|gb|ACD96421.1| ribosomal protein S2 [Geobacter lovleyi SZ] Length = 257 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 161/240 (67%), Gaps = 6/240 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A + ++ Sbjct: 1 MSSISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKES 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +LFV TK QA D V E A R QY VN +WLGGM+TN+ TV QSI++L+ L+ + Sbjct: 61 AEQGNTVLFVGTKKQAQDSVAEEATRCGQYYVNQRWLGGMLTNFSTVKQSIERLKKLDAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +TKKE L ++++R+KL++ L GI++M LP +MFV+D E++A+QEA++L Sbjct: 121 FEDGTIEAYTKKEALKMDKEREKLEKVLGGIKNMNKLPGMMFVIDPKNEEIAVQEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-----IARQHSYMGAD 236 IP+VA+VDTN +PD++D+VIPGNDD+ R+I L +A A +G + Q GAD Sbjct: 181 IPVVAIVDTNCDPDMIDHVIPGNDDAIRAIRLLTAKIADAVQEGADARNVVLQSGAEGAD 240 >gi|192361500|ref|YP_001981606.1| 30S ribosomal protein S2 [Cellvibrio japonicus Ueda107] gi|238692420|sp|B3PBP6|RS2_CELJU RecName: Full=30S ribosomal protein S2 gi|190687665|gb|ACE85343.1| ribosomal protein S2 [Cellvibrio japonicus Ueda107] Length = 246 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/241 (46%), Positives = 157/241 (65%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ ++R +L +GV FGH+ WNPKM +YIF RN HII+L TVP +AL +I+ Sbjct: 1 MPQVSMRDMLSAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNEALNLITQM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL-EE 121 A+ +ILFV TK A + E A+R+ Q V+ +WLGGM+TN+KT+ SI++L DL + Sbjct: 61 AAQKKKILFVGTKRAAQKTIKEQAERAGQPFVSHRWLGGMLTNYKTIRASIRRLSDLTTQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R++ GI+ MGGLPD MFV+D E++AIQEA +L Sbjct: 121 SQDGTFAKLTKKEALMRSRDMEKLERSIGGIKGMGGLPDAMFVIDVEHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ +DYVIPGNDD+ R+I L+ +A A ++G S D A Sbjct: 181 IPVIGVVDTNSSPEGIDYVIPGNDDAIRAIKLYATAIADACLEGSKSSASVPNKDEYVAA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|332850397|ref|ZP_08432717.1| ribosomal protein S2 [Acinetobacter baumannii 6013150] gi|332871836|ref|ZP_08440259.1| ribosomal protein S2 [Acinetobacter baumannii 6013113] gi|332875272|ref|ZP_08443104.1| ribosomal protein S2 [Acinetobacter baumannii 6014059] gi|332730668|gb|EGJ61979.1| ribosomal protein S2 [Acinetobacter baumannii 6013150] gi|332731165|gb|EGJ62465.1| ribosomal protein S2 [Acinetobacter baumannii 6013113] gi|332736529|gb|EGJ67524.1| ribosomal protein S2 [Acinetobacter baumannii 6014059] Length = 267 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 165/243 (67%), Gaps = 3/243 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 18 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 78 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 137 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 138 TQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 197 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G ++++ A+ ++ Sbjct: 198 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQA 255 Query: 240 AGE 242 G+ Sbjct: 256 KGD 258 >gi|257454315|ref|ZP_05619579.1| ribosomal protein S2 [Enhydrobacter aerosaccus SK60] gi|257448286|gb|EEV23265.1| ribosomal protein S2 [Enhydrobacter aerosaccus SK60] Length = 256 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 153/224 (68%), Gaps = 5/224 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q ++R LLE+G FGH+ WNPKM ++IF RN HII+L TV + +AL ++ A Sbjct: 8 QVSMRDLLEAGAHFGHQTRFWNPKMGKFIFGARNKIHIINLEHTVKAMNEALNFVNREAA 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG ++LFV TK AS+ + E A R+ V+ +WLGGM+TNWKT+ QSI +L++ E+ Sbjct: 68 RGNKVLFVGTKRAASNVISEQAARAGMPYVDHRWLGGMLTNWKTIRQSITRLKEYEK--Q 125 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ F TK+E L R+ +KL+RAL GI++M GLPD +FVVD + E +AI+EA+ L Sbjct: 126 AEDGTFAKLTKREALERTREMEKLERALGGIKNMNGLPDAIFVVDVDHEAIAIKEAKNLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ +VDTNSNPD VDYVIP NDD+ R++ L+ VA A I G Sbjct: 186 IPVIGIVDTNSNPDDVDYVIPANDDAIRAVTLYVSAVADAIIAG 229 >gi|317046982|ref|YP_004114630.1| 30S ribosomal protein S2 [Pantoea sp. At-9b] gi|316948599|gb|ADU68074.1| ribosomal protein S2 [Pantoea sp. At-9b] Length = 241 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK A++ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAAAEAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVSLYLTAVATTVREG 224 >gi|157372025|ref|YP_001480014.1| 30S ribosomal protein S2 [Serratia proteamaculans 568] gi|167011238|sp|A8GIE6|RS2_SERP5 RecName: Full=30S ribosomal protein S2 gi|157323789|gb|ABV42886.1| ribosomal protein S2 [Serratia proteamaculans 568] Length = 241 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMANAALAELTKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKEYATGCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G Sbjct: 183 VFSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLTAVAAAVREG 224 >gi|209573718|sp|B0U101|RS2_FRAP2 RecName: Full=30S ribosomal protein S2 Length = 239 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/220 (49%), Positives = 156/220 (70%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA D + AKR V+ +WLGGM+TN+KTV QSI++L LE++ KE+ Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKM--KED 121 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I + Sbjct: 122 GTFESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 V++VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 182 VSIVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|78485629|ref|YP_391554.1| ribosomal protein S2 [Thiomicrospira crunogena XCL-2] gi|78363915|gb|ABB41880.1| SSU ribosomal protein S2P [Thiomicrospira crunogena XCL-2] Length = 248 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+PM AL + Sbjct: 5 MAKVTMRQMLEAGVHFGHQTRYWNPKMGEYIFGARNKIHIVNLEKTLPMFNDALNFLGGI 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G +LFV TK A D V + AKR VN +WLGGM+TN+KT+ QSI+ L+DLE Sbjct: 65 AAKKGTVLFVGTKRAAGDLVAQEAKRCGMPYVNHRWLGGMLTNFKTIKQSIKNLKDLE-- 122 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + +++ F TKKE L R++ KL+ +L GI+DM +PD +F++DT EK+AIQEA+ Sbjct: 123 VQEQDGTFEKITKKEALMRSRQKAKLELSLGGIKDMRAMPDAIFIIDTGNEKIAIQEAKN 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V VVDTN++P+ VDYVIPGNDD+ R+++L+ A A +G Sbjct: 183 LGIPVVGVVDTNNDPNGVDYVIPGNDDAVRAVSLYLSAAADAINEG 228 >gi|241667399|ref|ZP_04754977.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875948|ref|ZP_05248658.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841969|gb|EET20383.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 239 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/220 (49%), Positives = 156/220 (70%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA D + AKR V+ +WLGGM+TN+KTV QSI++L LE++ KE+ Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKM--KED 121 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I + Sbjct: 122 GTFGSLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 V++VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 182 VSIVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|167626818|ref|YP_001677318.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596819|gb|ABZ86817.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 257 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/220 (49%), Positives = 156/220 (70%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 22 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 81 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA D + AKR V+ +WLGGM+TN+KTV QSI++L LE++ KE+ Sbjct: 82 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKM--KED 139 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I + Sbjct: 140 GTFESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKV 199 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 V++VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 200 VSIVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 239 >gi|255321104|ref|ZP_05362271.1| ribosomal protein S2 [Acinetobacter radioresistens SK82] gi|255301843|gb|EET81093.1| ribosomal protein S2 [Acinetobacter radioresistens SK82] Length = 272 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 111/240 (46%), Positives = 158/240 (65%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL +G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 25 MADYNVSMRDLLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 84 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 85 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 144 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 145 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 204 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A I G S A K+ Sbjct: 205 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKA 264 >gi|148543916|ref|YP_001271286.1| 30S ribosomal protein S2 [Lactobacillus reuteri DSM 20016] gi|184153312|ref|YP_001841653.1| 30S ribosomal protein S2 [Lactobacillus reuteri JCM 1112] gi|194468462|ref|ZP_03074448.1| ribosomal protein S2 [Lactobacillus reuteri 100-23] gi|325682549|ref|ZP_08162066.1| 30S ribosomal protein S2 [Lactobacillus reuteri MM4-1A] gi|167011236|sp|A5VJC5|RS2_LACRD RecName: Full=30S ribosomal protein S2 gi|229470514|sp|B2G6U1|RS2_LACRJ RecName: Full=30S ribosomal protein S2 gi|148530950|gb|ABQ82949.1| SSU ribosomal protein S2P [Lactobacillus reuteri DSM 20016] gi|183224656|dbj|BAG25173.1| 30S Ribosomal protein S2 [Lactobacillus reuteri JCM 1112] gi|194453315|gb|EDX42213.1| ribosomal protein S2 [Lactobacillus reuteri 100-23] gi|324978388|gb|EGC15338.1| 30S ribosomal protein S2 [Lactobacillus reuteri MM4-1A] Length = 262 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/268 (44%), Positives = 173/268 (64%), Gaps = 16/268 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D A Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDVAAND 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ E Sbjct: 65 GVALFVGTKKQAQDAIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L IP Sbjct: 123 DGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVMFIVDPHKEQIAVKEAQKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM--GADTKSAG 241 IVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Q AD +A Sbjct: 183 IVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAFVEGKQGQDDAQQETADDNAAN 242 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 ETV EDS + + ++G+E Sbjct: 243 ETV---------SEDSLKNLKNSVEGKE 261 >gi|146281911|ref|YP_001172064.1| 30S ribosomal protein S2 [Pseudomonas stutzeri A1501] gi|166226743|sp|A4VJS1|RS2_PSEU5 RecName: Full=30S ribosomal protein S2 gi|145570116|gb|ABP79222.1| 30S ribosomal protein S2 [Pseudomonas stutzeri A1501] gi|327480154|gb|AEA83464.1| 30S ribosomal protein S2 [Pseudomonas stutzeri DSM 4166] Length = 246 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 113/235 (48%), Positives = 159/235 (67%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R +L++GV FGH+ WNPKM++YIF RN HII+L +T+PM AL+ + Sbjct: 1 MSQVTMRDMLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL+R+L GI+DMGGLPD MFV+D + E++AI EA +L Sbjct: 121 SQDGTFEKLTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+P+ VDY+IPGNDD+ R++ L+ +A A + G RQ+ GAD Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRG--RQNGAGGAD 233 >gi|209574093|sp|Q31G43|RS2_THICR RecName: Full=30S ribosomal protein S2 Length = 244 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+PM AL + Sbjct: 1 MAKVTMRQMLEAGVHFGHQTRYWNPKMGEYIFGARNKIHIVNLEKTLPMFNDALNFLGGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G +LFV TK A D V + AKR VN +WLGGM+TN+KT+ QSI+ L+DLE Sbjct: 61 AAKKGTVLFVGTKRAAGDLVAQEAKRCGMPYVNHRWLGGMLTNFKTIKQSIKNLKDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + +++ F TKKE L R++ KL+ +L GI+DM +PD +F++DT EK+AIQEA+ Sbjct: 119 VQEQDGTFEKITKKEALMRSRQKAKLELSLGGIKDMRAMPDAIFIIDTGNEKIAIQEAKN 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V VVDTN++P+ VDYVIPGNDD+ R+++L+ A A +G Sbjct: 179 LGIPVVGVVDTNNDPNGVDYVIPGNDDAVRAVSLYLSAAADAINEG 224 >gi|54113283|gb|AAV29275.1| NT02FT0086 [synthetic construct] Length = 239 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSVGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMSFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|302554443|ref|ZP_07306785.1| ribosomal protein S2 [Streptomyces viridochromogenes DSM 40736] gi|302472061|gb|EFL35154.1| ribosomal protein S2 [Streptomyces viridochromogenes DSM 40736] Length = 310 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 165/240 (68%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM--GADTKSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + G K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSGVATEGKGEKAAGE 244 >gi|294631667|ref|ZP_06710227.1| ribosomal protein S2 [Streptomyces sp. e14] gi|292835000|gb|EFF93349.1| ribosomal protein S2 [Streptomyces sp. e14] Length = 303 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 165/240 (68%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--KSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVNAGDKGEKAAGE 244 >gi|304414215|ref|ZP_07395583.1| 30S ribosomal subunit protein S2 [Candidatus Regiella insecticola LSR1] gi|304283429|gb|EFL91825.1| 30S ribosomal subunit protein S2 [Candidatus Regiella insecticola LSR1] Length = 306 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+GV +GH+ WNPKM YIF RN HII+L +TVPML +AL + R Sbjct: 69 SMRKMLEAGVHYGHQTRYWNPKMGPYIFGTRNKVHIINLEKTVPMLNEALAELKKISTRK 128 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ + + A+ QY VN +WLGGM+TNWKTV QSI++L++LE + + Sbjct: 129 GKILFVGTKRAASESIKKTAEDCKQYFVNHRWLGGMLTNWKTVRQSIKRLKELESQSQDG 188 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ L+ +L GI+DMGGLPD +FV+D N E +AI+EA L IPI Sbjct: 189 TFEKLTKKEVLMRTRELSNLENSLGGIKDMGGLPDALFVIDANHEHIAIKEANNLGIPIF 248 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTNS+P +D++IPGNDD+ R+I L+ + VA+A +G Sbjct: 249 SIVDTNSSPTGIDFIIPGNDDAIRAINLYLEAVATAIHEG 288 >gi|56707466|ref|YP_169362.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669937|ref|YP_666494.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis FSC198] gi|224456548|ref|ZP_03665021.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370840|ref|ZP_04986845.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874305|ref|ZP_05247015.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis MA00-2987] gi|61215377|sp|Q5NHY0|RS2_FRATT RecName: Full=30S ribosomal protein S2 gi|123169597|sp|Q14JD2|RS2_FRAT1 RecName: Full=30S ribosomal protein S2 gi|56603958|emb|CAG44946.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320270|emb|CAL08329.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis FSC198] gi|151569083|gb|EDN34737.1| hypothetical protein FTBG_00655 [Francisella tularensis subsp. tularensis FSC033] gi|254840304|gb|EET18740.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis MA00-2987] gi|282158610|gb|ADA78001.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis NE061598] Length = 239 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSVGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMSFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|262375514|ref|ZP_06068747.1| ribosomal protein S2 [Acinetobacter lwoffii SH145] gi|262309768|gb|EEY90898.1| ribosomal protein S2 [Acinetobacter lwoffii SH145] Length = 248 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 157/240 (65%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRDYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++ ++LFV TK AS + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+DL+ Sbjct: 61 NLASKKNKVLFVGTKRAASAIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERGLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K+ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKA 240 >gi|217970580|ref|YP_002355814.1| 30S ribosomal protein S2 [Thauera sp. MZ1T] gi|217507907|gb|ACK54918.1| ribosomal protein S2 [Thauera sp. MZ1T] Length = 251 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNP+M YIF +RN HI++L +T+ +A++ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMAKYNEAMEFVRKLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV+TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L+++E ++ Sbjct: 64 GNIMFVSTKRQAREIIAEEAQRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMMEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + +K+E L + R+ +KL++++ GI+DMGGLPD +FV+D K+AI EA++L IP+V Sbjct: 124 SIERLSKREALTVRRELEKLQKSIGGIKDMGGLPDALFVIDVGYHKIAITEAQKLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +P+ VDY+IPGNDDSSR+I L+ VA A + G Sbjct: 184 AVVDTNHSPEGVDYLIPGNDDSSRAIRLYARGVADAVLQG 223 >gi|227875943|ref|ZP_03994066.1| ribosomal protein S2 [Mobiluncus mulieris ATCC 35243] gi|269977910|ref|ZP_06184864.1| ribosomal protein S2 [Mobiluncus mulieris 28-1] gi|306819222|ref|ZP_07452933.1| 30S ribosomal protein S2 [Mobiluncus mulieris ATCC 35239] gi|307700232|ref|ZP_07637273.1| ribosomal protein S2 [Mobiluncus mulieris FB024-16] gi|227843475|gb|EEJ53661.1| ribosomal protein S2 [Mobiluncus mulieris ATCC 35243] gi|269933876|gb|EEZ90456.1| ribosomal protein S2 [Mobiluncus mulieris 28-1] gi|304648004|gb|EFM45318.1| 30S ribosomal protein S2 [Mobiluncus mulieris ATCC 35239] gi|307614614|gb|EFN93842.1| ribosomal protein S2 [Mobiluncus mulieris FB024-16] Length = 279 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 155/225 (68%), Gaps = 2/225 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I +R+ +I+DL QT+ + A + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTDRSGIYILDLQQTLADIDIAFDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE--LLN 124 G +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ + Sbjct: 65 GTMLFVGTKKQAQESIQEQATRVGMPYVNQRWLGGMLTNFATVHKRLQRLKELEQYDFED 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + GFTKKE L + R++DKL + L GIRDM P +++VVDT +E LAI EA++L IPI Sbjct: 125 TASTGFTKKELLMMRREKDKLAKTLGGIRDMNKTPSMLWVVDTKKEHLAISEAQKLGIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 VA++DTN +PD VDY IPGNDD+ R++ L ++A A +G+ Q Sbjct: 185 VAILDTNCDPDEVDYGIPGNDDAIRAVDLLTKIIADACAEGLVEQ 229 >gi|302558128|ref|ZP_07310470.1| ribosomal protein S2 [Streptomyces griseoflavus Tu4000] gi|302475746|gb|EFL38839.1| ribosomal protein S2 [Streptomyces griseoflavus Tu4000] Length = 308 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 166/240 (69%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPFVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH--SYMGADTKSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + + G K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLMSRSGAAEAGKGEKAAGE 244 >gi|51892629|ref|YP_075320.1| 30S ribosomal protein S2 [Symbiobacterium thermophilum IAM 14863] gi|61215498|sp|Q67PB7|RS2_SYMTH RecName: Full=30S ribosomal protein S2 gi|51856318|dbj|BAD40476.1| 30S ribosomal protein S2 [Symbiobacterium thermophilum IAM 14863] Length = 264 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 112/235 (47%), Positives = 159/235 (67%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M++ A + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTVRMVEIAYNAVRQMAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILF+ TK QA D V E A+R + VN +WLGGM+TN++T+ + I +L +LEE+ Sbjct: 64 GGKILFIGTKKQAQDAVREEAERCGMFYVNQRWLGGMLTNFETIKKRIARLNELEEIEGT 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E TKKE+ + +++KL++ L GI+ M LPD+ FV+D RE++A+ E R+L IPI Sbjct: 124 EYWSKLTKKEQAQLLHEKEKLEKNLGGIKGMKSLPDMAFVIDPRRERIAVSELRKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G RQ G DT + Sbjct: 184 VAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKIADAVIEG--RQ----GVDTSA 232 >gi|118580460|ref|YP_901710.1| 30S ribosomal protein S2 [Pelobacter propionicus DSM 2379] gi|166225292|sp|A1AQN2|RS2_PELPD RecName: Full=30S ribosomal protein S2 gi|118503170|gb|ABK99652.1| SSU ribosomal protein S2P [Pelobacter propionicus DSM 2379] Length = 257 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 113/253 (44%), Positives = 165/253 (65%), Gaps = 7/253 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A + ++ Sbjct: 1 MSSISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKES 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA D V E A+R + VN +WLGGM+TN+ TV QSI +L+ ++ + Sbjct: 61 VLNGDTVLFVGTKKQAQDSVCEEAQRCGMHYVNQRWLGGMLTNFTTVKQSIDRLKRIDAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L E++R KL++ L GI+ M LP LMFV+D E++AIQEA++L Sbjct: 121 FEDGTIEAYPKKEALQFEKERVKLQKILGGIKGMNRLPGLMFVIDPKNEEIAIQEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM------GA 235 IP+VA+VDTN +PD +DYVIPGNDD+ R+I L +A A I+G +++ + A Sbjct: 181 IPVVAIVDTNCDPDPIDYVIPGNDDAIRAIRLLSSKMADAVIEGAQARNAALQAEKEGAA 240 Query: 236 DTKSAGETVVHSK 248 D ++AGE VV + Sbjct: 241 DAETAGEQVVEEE 253 >gi|89255658|ref|YP_513019.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica LVS] gi|115314159|ref|YP_762882.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica OSU18] gi|167009901|ref|ZP_02274832.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica FSC200] gi|254367049|ref|ZP_04983085.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica 257] gi|290953223|ref|ZP_06557844.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica URFT1] gi|295313591|ref|ZP_06804180.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica URFT1] gi|122325797|sp|Q0BNT9|RS2_FRATO RecName: Full=30S ribosomal protein S2 gi|122999778|sp|Q2A5I2|RS2_FRATH RecName: Full=30S ribosomal protein S2 gi|209573719|sp|A7N9R4|RS2_FRATF RecName: Full=30S ribosomal protein S2 gi|89143489|emb|CAJ78665.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica LVS] gi|115129058|gb|ABI82245.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica OSU18] gi|134252875|gb|EBA51969.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica 257] Length = 239 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|88798258|ref|ZP_01113844.1| ribosomal protein S2 [Reinekea sp. MED297] gi|88779034|gb|EAR10223.1| ribosomal protein S2 [Reinekea sp. MED297] Length = 241 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 154/221 (69%), Gaps = 7/221 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++GV FGH+ WNPKM +YIF RN HII+L TVP L AL + A+ Sbjct: 1 MRDLLKAGVHFGHQTRYWNPKMSQYIFGARNKIHIINLEHTVPALNDALSFVGSLAAKKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK AS+ + E A R+ V +WLGGM+TN+KT+ QSI++LR+L+ +++ Sbjct: 61 KILFVGTKRSASNIIREEATRAGMPYVAHRWLGGMLTNYKTIRQSIKRLRELQ---TQQD 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G TKKERL R+ KL++++ GI+DMGGLPD +FV+D + E++AIQEA +L IP Sbjct: 118 DGTFEQLTKKERLMNTREIAKLEKSIGGIKDMGGLPDALFVIDVDHERIAIQEANKLGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++ VVDTNSNPD +DYVIPGNDD+ R+I ++ +A A ++ Sbjct: 178 VIGVVDTNSNPDGIDYVIPGNDDAIRAIEIYAQAMADAVLE 218 >gi|209573691|sp|A1S4P0|RS2_SHEAM RecName: Full=30S ribosomal protein S2 Length = 242 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 106/211 (50%), Positives = 154/211 (72%), Gaps = 1/211 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 65 GKILFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELETQSVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD +FV+ + E +AI+EA L IP+V Sbjct: 125 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 AVVDTN++PD V+Y++PGNDD+ R+I L+ + Sbjct: 185 AVVDTNASPDGVNYIVPGNDDAMRAIRLYTE 215 >gi|290957083|ref|YP_003488265.1| 30S ribosomal protein S2 [Streptomyces scabiei 87.22] gi|260646609|emb|CBG69706.1| 30S ribosomal protein S2 [Streptomyces scabiei 87.22] Length = 308 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 4/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +TVA G Sbjct: 5 TMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE++ ++ Sbjct: 65 GTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L IP+ Sbjct: 125 VAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQH-SYMGADTKSAGE 242 VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G I+R + G K+AGE Sbjct: 185 VAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSRVATEGKGDKAAGE 244 >gi|227364826|ref|ZP_03848874.1| ribosomal protein S2 [Lactobacillus reuteri MM2-3] gi|227070170|gb|EEI08545.1| ribosomal protein S2 [Lactobacillus reuteri MM2-3] Length = 257 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/267 (44%), Positives = 172/267 (64%), Gaps = 16/267 (5%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D A G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDVAANDG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ E+ Sbjct: 61 VALFVGTKKQAQDAIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM--SED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L IPI Sbjct: 119 GTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVMFIVDPHKEQIAVKEAQKLHIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM--GADTKSAGE 242 VA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Q AD +A E Sbjct: 179 VAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAFVEGKQGQDDAQQETADDNAANE 238 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQE 269 TV EDS + + ++G+E Sbjct: 239 TV---------SEDSLKNLKNSVEGKE 256 >gi|302525188|ref|ZP_07277530.1| ribosomal protein S2 [Streptomyces sp. AA4] gi|302434083|gb|EFL05899.1| ribosomal protein S2 [Streptomyces sp. AA4] Length = 297 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 115/240 (47%), Positives = 163/240 (67%), Gaps = 5/240 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLL+SGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + I +TVA G Sbjct: 5 TMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQQTLTYIDRAYEFIKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK QA + + A R VN +WLGGM+TN++TV + + +L++LE ++ Sbjct: 65 GTIMFVGTKKQAQEAIANEAARVGMPYVNQRWLGGMLTNFQTVHKRLLRLKELEA--QEQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TK+E L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L IP Sbjct: 123 TGGFAGLTKREILTLTREKDKLEKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA++DTN +PD VDY IPGNDD+ RS AL +VA AA G+ + GA + ET Sbjct: 183 VVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMARSGRNGASADAKPET 242 >gi|300715396|ref|YP_003740199.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661] gi|299061232|emb|CAX58341.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661] Length = 241 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+IL V TK AS+ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILIVGTKRAASESVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G Sbjct: 183 VFAIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVATTVREG 224 >gi|294671363|ref|ZP_06736213.1| hypothetical protein NEIELOOT_03071 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306911|gb|EFE48154.1| hypothetical protein NEIELOOT_03071 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 238 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 107/219 (48%), Positives = 159/219 (72%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ LWNPKM +YIF RN HII+L +T+P+ +A + + VA G Sbjct: 1 MRQMLEAGVHFGHQTRLWNPKMAQYIFGSRNKIHIINLEKTLPLFLEAQEAVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L + +L N E Sbjct: 61 NILFVGTKRQAREIIREEAERAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKTAVLANAE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 G++KKE L++ R+ +KL+R+L GI++M GLPD +FV+DT + + EA +L IP++A Sbjct: 121 TSGYSKKELLDMTREVEKLERSLGGIKNMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN++P+ V +VIPGNDDS+++I L+C +A A ++G Sbjct: 181 VVDTNNSPEGVKHVIPGNDDSAKAIRLYCRGIADAVLEG 219 >gi|254368535|ref|ZP_04984551.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp. holarctica FSC022] gi|157121438|gb|EDO65629.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp. holarctica FSC022] Length = 239 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|89092089|ref|ZP_01165044.1| 30S ribosomal protein S2 [Oceanospirillum sp. MED92] gi|89083824|gb|EAR63041.1| 30S ribosomal protein S2 [Oceanospirillum sp. MED92] Length = 246 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+R LL++GV FGH+ WNPKM ++IF RN HII+L T+P L AL I + Sbjct: 1 MAKITMRDLLKAGVHFGHQTRYWNPKMSKFIFGARNKIHIINLEHTLPALNGALDNIQNM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A ++LFV TK AS V E A R+ VN +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 61 AANKNKVLFVGTKRAASKIVKEEASRAGMPYVNHRWLGGMLTNYKTIRQSIRRLRDLESQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L +R+ +KL+R++ GI++MGGLPD +FV+D + E++A+ EA +L Sbjct: 121 SQDGTFEKLTKKEALMRQREMEKLERSIGGIKEMGGLPDALFVIDVDHERIAVNEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ VVDTNSNPD VD VIPGNDD+ R+I ++ A A ++G Sbjct: 181 IPVIGVVDTNSNPDGVDVVIPGNDDALRAIQIYVKSAADACLEG 224 >gi|298346463|ref|YP_003719150.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 43063] gi|304389798|ref|ZP_07371757.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657105|ref|ZP_07909989.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236524|gb|ADI67656.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 43063] gi|304326974|gb|EFL94213.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492208|gb|EFU81815.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 281 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 112/237 (47%), Positives = 161/237 (67%), Gaps = 3/237 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I +R+ +I+DL QT+ + A + + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTDRSGIYILDLQQTIADIDIAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE--LLN 124 G +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ + Sbjct: 65 GTLLFVGTKKQAQESIQEQATRVGMPFVNERWLGGMLTNFSTVHKRLQRLKELEQYDFED 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL + L GIRDM P ++VVDT +E LAI EA++L IP+ Sbjct: 125 TSASGLTKKELLMMRREKDKLAKTLGGIRDMAKTPSAIWVVDTKKEHLAIAEAQKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSA 240 VA++DTN +PD VDY IPGNDD+ R++ L ++A A +G +AR +G + +SA Sbjct: 185 VAILDTNCDPDEVDYGIPGNDDAIRAVDLLTKVIADACAEGLLARSKKQLGENPESA 241 >gi|148245100|ref|YP_001219794.1| 30S ribosomal protein S2 [Candidatus Vesicomyosocius okutanii HA] gi|146326927|dbj|BAF62070.1| 30S ribosomal protein S2 [Candidatus Vesicomyosocius okutanii HA] Length = 261 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 104/218 (47%), Positives = 153/218 (70%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++++LE+GV FGHR W+PKM+R+I+ RN HII+L +T+PM L I+ TV G Sbjct: 5 SMKKMLETGVHFGHRARFWHPKMKRFIYGTRNGIHIINLEKTLPMFNDVLNFINKTVKAG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK AS+ + + A R VN +WLGGMMTN+KT+ SI++L+DLE L + Sbjct: 65 RSILFVGTKRAASNIIKQEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLEFLAEEN 124 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F KKE L ++R+ KL+R+L GI+D+G +PD++FV+DT EK A+ EA++L +PI+ Sbjct: 125 FNQFGKKEALIMKREMKKLERSLGGIKDLGSIPDVVFVIDTGIEKNAVAEAKKLHLPIIG 184 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTN NP+ +DYVIPGNDDS R+I + +A+ ++ Sbjct: 185 IVDTNHNPEGIDYVIPGNDDSIRAIGFYAREIANTILE 222 >gi|156501608|ref|YP_001427673.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica FTNF002-00] gi|156252211|gb|ABU60717.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 236 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 1 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 61 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 120 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D N+E +AIQEA++L I +VA Sbjct: 121 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 181 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 218 >gi|187932155|ref|YP_001892140.1| 30S ribosomal protein S2 [Francisella tularensis subsp. mediasiatica FSC147] gi|187713064|gb|ACD31361.1| 30S ribosomal protein S2 [Francisella tularensis subsp. mediasiatica FSC147] Length = 239 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 107/218 (49%), Positives = 153/218 (70%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +I+FV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KIIFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|226306029|ref|YP_002765989.1| 30S ribosomal protein S2 [Rhodococcus erythropolis PR4] gi|229491372|ref|ZP_04385196.1| ribosomal protein S2 [Rhodococcus erythropolis SK121] gi|259495222|sp|C0ZY15|RS2_RHOE4 RecName: Full=30S ribosomal protein S2 gi|226185146|dbj|BAH33250.1| 30S ribosomal protein S2 [Rhodococcus erythropolis PR4] gi|229321657|gb|EEN87454.1| ribosomal protein S2 [Rhodococcus erythropolis SK121] Length = 285 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 109/223 (48%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++Q+L+SG FGH+ WNPKM+R+I +RN +IIDL QT+ + KA + + +TVA G Sbjct: 5 TMKQMLDSGTHFGHQTRRWNPKMKRFILTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A R VN +WLGGM+TN+ TV + + +L++LE + ++ Sbjct: 65 GTVLFVGTKKQAQESIASEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM--EQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF TKKE L + R+ KL R L GIRDM +P +++VDTN+E LA+ EAR+L IP Sbjct: 123 TGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWIVDTNKEHLAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ Sbjct: 183 VIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGV 225 >gi|84394414|ref|ZP_00993131.1| 30S ribosomal protein S2 [Vibrio splendidus 12B01] gi|84374947|gb|EAP91877.1| 30S ribosomal protein S2 [Vibrio splendidus 12B01] Length = 244 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 107/220 (48%), Positives = 158/220 (71%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF R+ HII+L +TVPM +AL I+ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARSKVHIINLEKTVPMFNEALAEIAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD +D++IPGNDD+ R++ L+ + A A +G Sbjct: 185 AVVDTNSNPDGIDFIIPGNDDAIRAVQLYLNAAADAVKEG 224 >gi|85859430|ref|YP_461632.1| ribosomal protein S2 [Syntrophus aciditrophicus SB] gi|123725263|sp|Q2LTQ7|RS2_SYNAS RecName: Full=30S ribosomal protein S2 gi|85722521|gb|ABC77464.1| ribosomal protein S2 [Syntrophus aciditrophicus SB] Length = 277 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 109/245 (44%), Positives = 163/245 (66%), Gaps = 2/245 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+ YIF RNN +IIDL QTV + Q A + DTV+ G Sbjct: 5 SMKQLLEAGVHFGHQTNKWNPKMKPYIFGARNNIYIIDLQQTVGLFQNAYNFVIDTVSEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+F+ TK Q+ D + + A R VN +WLGGM+TN+ T+ + I +L L+++ + Sbjct: 65 GEIMFIGTKKQSQDSIHDEATRCGMPYVNQRWLGGMLTNFVTIKKRIDRLNYLDQIFEDD 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + F KKE + ++++R+KL + L GI+ M LP +F+VD RE +A+ EA++LRIPI+ Sbjct: 125 SVRAFPKKEIMGLQKEREKLVKVLGGIQKMKSLPAALFIVDPKRETIAVNEAKKLRIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT-KSAGETV 244 A+VDTN +P+ +DY+IPGNDD+ R+I LF A A +G R + A+T K A + Sbjct: 185 AIVDTNCDPENIDYIIPGNDDAIRAIKLFSSKFADAVTEGKRRYEERLQAETDKDAESST 244 Query: 245 VHSKE 249 V +E Sbjct: 245 VQQEE 249 >gi|315616348|gb|EFU96966.1| ribosomal protein S2 [Escherichia coli 3431] Length = 233 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 1/216 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G+IL Sbjct: 1 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQG 129 FV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VD Sbjct: 121 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 TNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 181 TNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 216 >gi|119774276|ref|YP_927016.1| 30S ribosomal protein S2 [Shewanella amazonensis SB2B] gi|119766776|gb|ABL99346.1| SSU ribosomal protein S2P [Shewanella amazonensis SB2B] Length = 258 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 106/211 (50%), Positives = 154/211 (72%), Gaps = 1/211 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ ++ Sbjct: 21 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKK 80 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE + ++ Sbjct: 81 GKILFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELETQSVDG 140 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD +FV+ + E +AI+EA L IP+V Sbjct: 141 TFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEHIAIKEANNLGIPVV 200 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 AVVDTN++PD V+Y++PGNDD+ R+I L+ + Sbjct: 201 AVVDTNASPDGVNYIVPGNDDAMRAIRLYTE 231 >gi|227544961|ref|ZP_03975010.1| ribosomal protein S2 [Lactobacillus reuteri CF48-3A] gi|300910008|ref|ZP_07127468.1| 30S ribosomal protein S2 [Lactobacillus reuteri SD2112] gi|227185072|gb|EEI65143.1| ribosomal protein S2 [Lactobacillus reuteri CF48-3A] gi|300892656|gb|EFK86016.1| 30S ribosomal protein S2 [Lactobacillus reuteri SD2112] Length = 262 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 119/268 (44%), Positives = 173/268 (64%), Gaps = 16/268 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D A Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDVAAND 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ E Sbjct: 65 GVALFVGTKKQAQDAIEEEAIRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L IP Sbjct: 123 DGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVMFIVDPHKEQIAVKEAQKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM--GADTKSAG 241 IVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Q AD +A Sbjct: 183 IVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAFVEGKQGQDDAQQETADDNAAN 242 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 ETV EDS + + ++G+E Sbjct: 243 ETV---------SEDSLKNLKNSVEGKE 261 >gi|302392363|ref|YP_003828183.1| 30S ribosomal protein S2P [Acetohalobium arabaticum DSM 5501] gi|302204440|gb|ADL13118.1| SSU ribosomal protein S2P [Acetohalobium arabaticum DSM 5501] Length = 266 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++++LESGV FGH+ WNPKME YIF ERN +IIDL QT + ++A + D + G Sbjct: 5 TMKEMLESGVHFGHKTRRWNPKMESYIFTERNGIYIIDLQQTEKLAEEAYNFVRDLASEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILF +TK QA + + A R V +WLGGM+TN++T+S+ I +L +LE++ E Sbjct: 65 KQILFASTKKQAQETIEREATRCGMPYVKERWLGGMLTNYQTISKRIDRLEELEQM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + ++R+RDKL R L GIRDM GLPD +F+ D RE++A+ EA +L I Sbjct: 122 EDGLFEVLPKKEVMELKRERDKLVRFLGGIRDMDGLPDAIFIADPRREEIAVAEANKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PDL+DYVIPGNDD+ R++ L ++A A ++G Sbjct: 182 PIVAIVDTNCDPDLIDYVIPGNDDAIRAVKLLTGIMADAVLEG 224 >gi|254226778|ref|ZP_04920352.1| ribosomal protein S2 [Vibrio cholerae V51] gi|125620716|gb|EAZ49076.1| ribosomal protein S2 [Vibrio cholerae V51] Length = 256 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 109/212 (51%), Positives = 153/212 (72%), Gaps = 1/212 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 45 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 104 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 105 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 164 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 165 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 224 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L Sbjct: 225 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQL 256 >gi|288553035|ref|YP_003424970.1| 30S ribosomal protein S2 [Bacillus pseudofirmus OF4] gi|288544195|gb|ADC48078.1| 30S ribosomal protein S2 [Bacillus pseudofirmus OF4] Length = 277 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 159/223 (71%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + D A Sbjct: 41 ISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEQAYNFVRDLAAD 100 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D V E A+R Y +N +WLGG +TN++T+ + I +L++LE++ + Sbjct: 101 GGKILFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRITRLKNLEKM--Q 158 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ D+L++ L GI+DM G+PD +FV+D +E++AI EA +L I Sbjct: 159 EDGTFDVLPKKEVILLKKEMDRLEKFLGGIKDMQGIPDALFVIDPRKERIAIAEAHKLNI 218 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 219 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEA 261 >gi|312868999|ref|ZP_07729176.1| ribosomal protein S2 [Lactobacillus oris PB013-T2-3] gi|311095425|gb|EFQ53692.1| ribosomal protein S2 [Lactobacillus oris PB013-T2-3] Length = 262 Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + + A G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYDYMKNVAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ E Sbjct: 65 GVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++R+KL+R L GI DM +PD++F+VD ++E++A++EA++L IP Sbjct: 123 DGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLFIVDPHKEQIAVKEAQKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 183 IVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAIVEG 224 >gi|319789073|ref|YP_004150706.1| ribosomal protein S2 [Thermovibrio ammonificans HB-1] gi|317113575|gb|ADU96065.1| ribosomal protein S2 [Thermovibrio ammonificans HB-1] Length = 287 Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 113/247 (45%), Positives = 166/247 (67%), Gaps = 7/247 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLE+GV FGH+ WNPKM+++IF ERN HIIDL QT+ ++A I+D VA G Sbjct: 43 TMKELLEAGVHFGHQKERWNPKMKKFIFTERNGIHIIDLQQTIKYFEQAYDYIADLVANG 102 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK Q D V E A+R Y VN +WLGG +TN++T+ +S+ KL+ L+++ E Sbjct: 103 GKVLFVCTKKQGQDIVKEEAERCGMYYVNKRWLGGTLTNFQTIRKSVFKLKMLKKM---E 159 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + + RK++KL+R + GI +M LPD +F+VD RE+ A++EAR+ I Sbjct: 160 EEGVFDQLPKKEAVRLRRKKEKLERYIGGIENMNRLPDALFIVDIVREENAVREARKAGI 219 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PIVA+VDTN++PDLVD IP NDD+ R+I L +A A ++G R+ + A+ K E Sbjct: 220 PIVALVDTNADPDLVDIPIPANDDAIRAIRLLTSRIADAVLEGKMRREALALAEGKEEEE 279 Query: 243 TVVHSKE 249 + +E Sbjct: 280 VDFNPEE 286 >gi|325983646|ref|YP_004296048.1| 30S ribosomal protein S2 [Nitrosomonas sp. AL212] gi|325533165|gb|ADZ27886.1| ribosomal protein S2 [Nitrosomonas sp. AL212] Length = 239 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 151/220 (68%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM YIF RN HII+L +T+ M ++A++ I A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLVMYEEAMKYIRQLSANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D V E A R V+ +WLGGM+TN+KT+ QSI++L+D+E ++ Sbjct: 64 GVILFVGTKRQARDIVREEAMRCGSPYVDQRWLGGMLTNFKTIKQSIKRLQDMENMVQDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 KKE L+++R+ DKL +L GI+DM GLPD +FV+D +K AI EAR+L IP++ Sbjct: 124 TLDKLVKKEALDLQRELDKLNSSLGGIKDMKGLPDALFVIDVGYQKGAITEARKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN NPD + Y+IPGNDDSSR+I L+ A A ++G Sbjct: 184 GVVDTNHNPDNLHYIIPGNDDSSRAIRLYARGAADAILEG 223 >gi|218781005|ref|YP_002432323.1| 30S ribosomal protein S2 [Desulfatibacillum alkenivorans AK-01] gi|226697636|sp|B8FGE6|RS2_DESAA RecName: Full=30S ribosomal protein S2 gi|218762389|gb|ACL04855.1| ribosomal protein S2 [Desulfatibacillum alkenivorans AK-01] Length = 294 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++++LLE+GV FGH+ WNPKM+ YIF RN +I+DL +TV M + A + +SD VA Sbjct: 3 KISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIVDLQKTVRMFRTACEFVSDVVA 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-L 123 GG +LFV TK QA + V E A R+ Y V+++WLGGM+TN++T+ + I +L L E+ L Sbjct: 63 NGGSVLFVGTKKQAREAVYEEANRAEAYYVHNRWLGGMLTNFQTIKKGIDRLNYLNEIKL 122 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N+ F KKERL +E++R KL L GIR M LP ++F++D E +A++EA+RL IP Sbjct: 123 NETINLFPKKERLKLEKERVKLDANLGGIRTMTKLPSVIFIIDPKNEAIAVREAKRLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VAVVDTN +PD +DYVIPGNDD+ R+I L +A A + G Sbjct: 183 TVAVVDTNCDPDDIDYVIPGNDDAIRAIRLLTSRIAEAVVQG 224 >gi|46579287|ref|YP_010095.1| 30S ribosomal protein S2 [Desulfovibrio vulgaris str. Hildenborough] gi|120603151|ref|YP_967551.1| 30S ribosomal protein S2 [Desulfovibrio vulgaris DP4] gi|61215613|sp|Q72DQ5|RS2_DESVH RecName: Full=30S ribosomal protein S2 gi|166225267|sp|A1VFA8|RS2_DESVV RecName: Full=30S ribosomal protein S2 gi|46448701|gb|AAS95354.1| ribosomal protein S2 [Desulfovibrio vulgaris str. Hildenborough] gi|120563380|gb|ABM29124.1| SSU ribosomal protein S2P [Desulfovibrio vulgaris DP4] gi|311233115|gb|ADP85969.1| ribosomal protein S2 [Desulfovibrio vulgaris RCH1] Length = 254 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 111/233 (47%), Positives = 157/233 (67%), Gaps = 1/233 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV M + A + DTVA G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKMFRVAHDKVVDTVANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 GR++F+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +SI +L+ LE + + Sbjct: 65 GRVMFIGTKRQAQEAVATEAGRAGQFYVTNRWMGGTLTNFFTIQKSIDRLKKLEAMFADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L ++R+ DKL L GI+DM LP L FV+D +RE +AI+E R+L IPIV Sbjct: 125 TVNRYQKKEILRLQREMDKLLATLGGIKDMDKLPQLAFVIDPHREDIAIKECRKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 AV DTN +PDL+D+VIPGNDD+ R+I LF +A A ++G A + G D + Sbjct: 185 AVTDTNCDPDLIDFVIPGNDDAIRAIKLFVAAIADACLEGDALRKERKGQDAE 237 >gi|308270376|emb|CBX26988.1| 30S ribosomal protein S2 [uncultured Desulfobacterium sp.] Length = 288 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 112/224 (50%), Positives = 151/224 (67%), Gaps = 1/224 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++LLE+GV FGH+ WNPKM++YIF RN +IIDL +TV M + A I DTVA Sbjct: 4 LTMKELLEAGVHFGHQTKRWNPKMKQYIFGARNGIYIIDLQKTVRMFKSAYDFIQDTVAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E A R + V+++WLGGM+TN++T+ Q I +L L + N Sbjct: 64 GKSVLFVGTKKQAKEAIYEEANRCEMFYVHNRWLGGMLTNFQTIKQGIDRLNYLNSIQND 123 Query: 126 ENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + F KKERL E++R KL L GIR M LP +F+VD E +AI+E +RLRIPI Sbjct: 124 GSINLFPKKERLKHEKERKKLDSTLGGIRIMNALPGAIFIVDPKHEAIAIREGKRLRIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 V++VDTN +PD VDY+IPGNDD+ RSI L +A+A I+G R Sbjct: 184 VSIVDTNCDPDDVDYIIPGNDDAIRSIRLISSRIATACIEGKKR 227 >gi|259503112|ref|ZP_05746014.1| 30S ribosomal protein S2 [Lactobacillus antri DSM 16041] gi|259168978|gb|EEW53473.1| 30S ribosomal protein S2 [Lactobacillus antri DSM 16041] Length = 262 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + A G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYDYMKSVAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ E Sbjct: 65 GVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++R+KL+R L GI DM +PD++F+VD ++E++A++EA++L IP Sbjct: 123 DGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLFIVDPHKEQIAVKEAQKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 183 IVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAIVEG 224 >gi|224825013|ref|ZP_03698119.1| ribosomal protein S2 [Lutiella nitroferrum 2002] gi|224602684|gb|EEG08861.1| ribosomal protein S2 [Lutiella nitroferrum 2002] Length = 242 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 158/223 (70%), Gaps = 1/223 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +YIF RN HII+L +T+P+ +A + + A Sbjct: 6 TMRQMLEAGVHFGHQTRFWNPKMAQYIFGSRNKIHIINLEKTLPLFVEAQEYVRRLAANK 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V E A R V+ +WLGGM+TN+KTV QSI++L + +L Sbjct: 66 GTVLFVGTKRQAREIVREEAARCGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKRAILESS 125 Query: 127 -NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G+ KKE L++ER+ +KL+R+L GI+DM GLPD +FV+DT +K + EA++L IP++ Sbjct: 126 GDTGYNKKELLDLEREVEKLERSLGGIKDMKGLPDAIFVIDTGYQKGTVVEAKKLGIPLI 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 VVDTN++P+ ++YVIPGNDDS+R+I L+ +A A ++G A+ Sbjct: 186 GVVDTNNSPEGINYVIPGNDDSNRAIRLYARGIADAVLEGRAQ 228 >gi|42525107|ref|NP_970487.1| 30S ribosomal protein S2 [Bdellovibrio bacteriovorus HD100] gi|81697725|sp|Q6MGY6|RS2_BDEBA RecName: Full=30S ribosomal protein S2 gi|39577318|emb|CAE81141.1| 30S ribosomal protein S2 [Bdellovibrio bacteriovorus HD100] Length = 313 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++++L++GV FGH+ WNPKM+ Y++ R HIIDL +TV KA + + + Sbjct: 1 MAQVTMKEMLDAGVHFGHQTQRWNPKMKPYVYTARGGIHIIDLQKTVVRANKAAEFVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GGR++FV TK QA + + EAA + QY V +WLGGMMTN++T+ SI +LR ++ + Sbjct: 61 AANGGRLIFVGTKKQAIEPIQEAAAKCGQYYVTKRWLGGMMTNFETIKSSIDRLRKIDTM 120 Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K E TKKER +E++ +L L GIRDM +P MFVVD +E +A+ EA+RL Sbjct: 121 KEKGEFNYLTKKERAKLEKEYLRLTDFLAGIRDMKEMPSAMFVVDLPKEHIAVAEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+ DTNS+P+ VD+ IPGNDD+ RSI LF +LVA A ++G Sbjct: 181 IPVVAIADTNSDPESVDFAIPGNDDAIRSIKLFSNLVADAYLEG 224 >gi|224510723|pdb|3FIH|B Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 30s Subunit, Trnas And The Ternary Complex. gi|294662218|pdb|2WWL|B Chain B, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 30s, The P-Site Trna And The Tnac Leader Peptide (Part 1 Of 2). gi|308387966|pdb|3OFO|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308387987|pdb|3OFP|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320024|pdb|3OFA|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320045|pdb|3OFB|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320128|pdb|3OFX|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320149|pdb|3OFY|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The Second 70s Ribosome gi|315113613|pdb|3OAQ|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|315113634|pdb|3OAR|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 218 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 1/216 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G+IL Sbjct: 1 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQG 129 FV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VD Sbjct: 121 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 TNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 181 TNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 216 >gi|300933914|ref|ZP_07149170.1| 30S ribosomal protein S2 [Corynebacterium resistens DSM 45100] Length = 264 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 161/221 (72%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + V A+R VN +WLGGM+TN++TV++ + +L++L+ + E Sbjct: 65 GNILYVGTKKQAQEAVATEAERVGMPYVNHRWLGGMLTNFQTVAKRLHRLKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R+KL+R L GI DM +P +++VDTN+E +A+ EA++LRIP+ Sbjct: 125 DGYKGRTKKEVLMLTRERNKLERVLGGIADMTKVPSALWIVDTNKEHIAVSEAQKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD+VD+ IPGNDDS S AL +++SA DG Sbjct: 185 VAILDTNCDPDVVDFPIPGNDDSIGSAALLTRVISSAVEDG 225 >gi|163856847|ref|YP_001631145.1| 30S ribosomal protein S2 [Bordetella petrii DSM 12804] gi|163260575|emb|CAP42877.1| 30S ribosomal protein S2 [Bordetella petrii] Length = 249 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 107/219 (48%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L QTV Q A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQDATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ + Sbjct: 64 NILFVGTKRAARELVAAEAARCGMPYVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGG 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ +KL +++ GI+DM GLPD +FV+D K+A+ EAR L IP+VA Sbjct: 124 AERMIKKEGLLFQRELEKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +PD +DYVIPGNDDS+++IAL+ +A A ++G Sbjct: 184 VVDTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEG 222 >gi|17546123|ref|NP_519525.1| 30S ribosomal protein S2 [Ralstonia solanacearum GMI1000] gi|25009208|sp|Q8XZJ1|RS2_RALSO RecName: Full=30S ribosomal protein S2 gi|17428419|emb|CAD15106.1| probable 30s ribosomal protein s2 [Ralstonia solanacearum GMI1000] Length = 247 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 157/224 (70%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEA--AKE 121 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ +KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALESMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|299067459|emb|CBJ38658.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum CMR15] Length = 247 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 157/224 (70%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDME--TAKE 121 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ +KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALESMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|313201221|ref|YP_004039879.1| 30S ribosomal protein S2 [Methylovorus sp. MP688] gi|312440537|gb|ADQ84643.1| ribosomal protein S2 [Methylovorus sp. MP688] Length = 242 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 108/216 (50%), Positives = 152/216 (70%), Gaps = 1/216 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+GV FGH+ WNPKM +IF +RN HI++L +T+P+ + AL+ + A GRIL Sbjct: 1 MLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPLFEDALKYVRQLAANKGRIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FV TK QA D + E A+R+ VN +WLGGM+TN+KTV QSI++L D E +L + Sbjct: 61 FVGTKRQARDIMKEEAERANCAYVNHRWLGGMLTNFKTVKQSIKRLNDYETMLQDGSLDK 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 F KKE L +R+ +KL+R++ GI++MGGLPD +F+VD E A+ EA +L IP++ VVD Sbjct: 121 FGKKEALGYKREVEKLQRSIGGIKEMGGLPDAIFIVDVGHESGAVTEAAKLGIPVIGVVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 TN++PD V YVIPGNDDSSR+I L+ +A A ++G Sbjct: 181 TNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEG 216 >gi|315924465|ref|ZP_07920687.1| 30S ribosomal protein S2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622344|gb|EFV02303.1| 30S ribosomal protein S2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 265 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL QTV M+ A + D A G Sbjct: 22 TMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQQTVKMIGDAYNFVRDLAAEG 81 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + AKRS + VN +WLGG +TNW+T+++ I +L+DL+ + +E Sbjct: 82 KDILFVGTKKQAQNSIENEAKRSGSFYVNHRWLGGTLTNWETINKRINRLKDLKRM--EE 139 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + R+R+KL++ L GI DM G+P M ++D +E++AIQEA +L IP Sbjct: 140 DGTFDLLPKKEVIGLRREREKLEKFLGGIEDMHGMPGAMVIIDCKKERIAIQEAHKLGIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+++VDTN +PD VDY+IPGNDD+ R++AL ++A A ++G Sbjct: 200 IISIVDTNCDPDDVDYIIPGNDDAIRAVALILRVLADAVLEG 241 >gi|317497300|ref|ZP_07955623.1| ribosomal protein S2 [Lachnospiraceae bacterium 5_1_63FAA] gi|291559418|emb|CBL38218.1| SSU ribosomal protein S2P [butyrate-producing bacterium SSC/2] gi|316895369|gb|EFV17528.1| ribosomal protein S2 [Lachnospiraceae bacterium 5_1_63FAA] Length = 240 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 161/240 (67%), Gaps = 9/240 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + D VA+ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKDCVAQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + A+R + VN +WLGGMMTN+KT+ I +L+ ++E+ + Sbjct: 64 GGKILFVGTKKQAQDSIQAEAERCGMFYVNQRWLGGMMTNFKTIESRIARLKKIKEM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F K+E L + +++DKL++ L GI +MGGLPD++FVVD +E + +QEA L I Sbjct: 122 EDGTFDVLPKREVLELNKEKDKLQKNLGGIEEMGGLPDMIFVVDPKKESICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+V + DTNS+P+ +DY+IPGNDD+ R++ L+ SA D + + + AD++ E Sbjct: 182 PLVGIADTNSDPEELDYIIPGNDDAIRAVK----LITSAMADAVIEANQGIDADSEEVAE 237 >gi|256830143|ref|YP_003158871.1| 30S riboosomal protein S2 [Desulfomicrobium baculatum DSM 4028] gi|256579319|gb|ACU90455.1| ribosomal protein S2 [Desulfomicrobium baculatum DSM 4028] Length = 261 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 153/222 (68%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM +IF R HIIDL QTV + +KA I+DTVARG Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPFIFGARKGIHIIDLQQTVKLYRKAHDFIADTVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+I+FV TK QA D + A+R Y V ++WLGG +TN++T+ SI +L+ LE + Sbjct: 65 GKIIFVGTKRQAQDVIKTEAERCGMYHVTNRWLGGTLTNYQTIRTSITRLKKLEGMFEDG 124 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + F KKE + +ER+ KL L GI+DM P F++D +RE++A++E R+L IPIV Sbjct: 125 SVSRFLKKEVVRMEREVTKLNLTLGGIKDMEEPPAAAFIIDPHREEIAVKECRKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AVVDTN +PDL+DY+IPGNDD+ R+I LF +A A ++G A Sbjct: 185 AVVDTNCDPDLIDYIIPGNDDAIRAIKLFAGAMADACMEGAA 226 >gi|116618299|ref|YP_818670.1| SSU ribosomal protein S2P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431624|ref|ZP_03913660.1| ribosomal protein S2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122271501|sp|Q03WX5|RS2_LEUMM RecName: Full=30S ribosomal protein S2 gi|116097146|gb|ABJ62297.1| SSU ribosomal protein S2P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352616|gb|EEJ42806.1| ribosomal protein S2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 258 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 105/227 (46%), Positives = 155/227 (68%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A I + Sbjct: 4 ISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFIRNASTD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DL+ + Sbjct: 64 GANVLFVGTKKQASDAIAEEATRAGQYYINHRWLGGTLTNWNTIKTRIQRLKDLQTMAED 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + + ++R+KL++ L GI+DM GLPD++FVVD +E++A++EA L IP+ Sbjct: 124 GTFEQLPKKEVVLLNKQREKLEKFLGGIQDMPGLPDVLFVVDPKKEEIAVKEANMLNIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN+NPD+VD IP NDD+ R++ L +A A I+G Q S Sbjct: 184 VAMIDTNANPDVVDVKIPANDDAIRAVRLITSKIADAVIEGRQGQDS 230 >gi|319779544|ref|YP_004130457.1| SSU ribosomal protein S2p (SAe) [Taylorella equigenitalis MCE9] gi|317109568|gb|ADU92314.1| SSU ribosomal protein S2p (SAe) [Taylorella equigenitalis MCE9] Length = 260 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 120/256 (46%), Positives = 168/256 (65%), Gaps = 4/256 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +LE+GV FGH+ WNPKM YIF +RN HII+L +T+ +AL I T +RG Sbjct: 4 MRDMLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTIEKYLEALAFIRKTASRGE 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + + E A R+ VN++WLGGMMTN+KTV SI++L+D+E N + Sbjct: 64 DILFVGTKRSAREIIAEEASRAGMPYVNNRWLGGMMTNFKTVRSSIKRLKDMEAAQNDGS 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L+ R +KL +++ GI+DM LP +F+VD K+AIQEAR L IP+VA Sbjct: 124 LERLTKKEALDFTRDLEKLNKSIGGIKDMNRLPSALFIVDVGYHKIAIQEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +P+ +DY+IPGNDDSSR++ ++ + VA+A ++G R+ G + E V Sbjct: 184 VVDTNHSPEGIDYIIPGNDDSSRAVQIYAEGVANAILEG--REQRLNGVVEEIQSEDFV- 240 Query: 247 SKEGMQLEEDSQSSES 262 S E LEE+S + ES Sbjct: 241 SDEDEVLEEESPNLES 256 >gi|300858731|ref|YP_003783714.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis FRC41] gi|300686185|gb|ADK29107.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis FRC41] gi|302206438|gb|ADL10780.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis C231] gi|302330994|gb|ADL21188.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis 1002] gi|308276680|gb|ADO26579.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis I19] Length = 276 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 158/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTFINEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GTILYVGTKKQAQESVKNEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N G TKKE L + R+R KL+R L GI DM +P M+V+DTN+E +A+ EA +L IP+ Sbjct: 125 NGYDGRTKKEVLMLTRERTKLERVLGGIADMNKIPSAMWVIDTNKEHIAVSEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD+V++ +PGNDD+ RSI + +++SA I+G Sbjct: 185 VAILDTNCDPDVVNFPVPGNDDAIRSIDVLTRVISSAVIEG 225 >gi|293605056|ref|ZP_06687449.1| 30S ribosomal protein S2 [Achromobacter piechaudii ATCC 43553] gi|292816558|gb|EFF75646.1| 30S ribosomal protein S2 [Achromobacter piechaudii ATCC 43553] Length = 249 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 108/219 (49%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L +TV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ + Sbjct: 64 NILFVGTKRAARELVASEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEVVVAEGG 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ DKL +++ GI+DM GLPD MFV+D K+AI EA+ L IP+VA Sbjct: 124 AERMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +PD +DYVIPGNDDS+++IAL+ +A A ++G Sbjct: 184 VVDTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEG 222 >gi|94986821|ref|YP_594754.1| 30S ribosomal protein S2 [Lawsonia intracellularis PHE/MN1-00] gi|122988787|sp|Q1MRE3|RS2_LAWIP RecName: Full=30S ribosomal protein S2 gi|94731070|emb|CAJ54433.1| ribosomal protein S2 [Lawsonia intracellularis PHE/MN1-00] Length = 291 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A I +TVA G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLYRAAHDKIVETVAAG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A R+ QY V ++W+GG +TN+ T+ +SI++L LE + + Sbjct: 65 GSVLFVGTKRQAQEAIATEATRAGQYYVANRWMGGTLTNFSTIQKSIERLNRLETMFSDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + KKE L + R+ DKL+ L GI++M LP L+F++D +RE +A++E R+L IPI+ Sbjct: 125 SVNRYQKKEILTLNREMDKLELTLGGIKNMERLPQLIFIIDPHRENIAVKEGRKLGIPIM 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 AV DTN +PDL+DY+IPGNDD+ R+I LF +A A I+G A Q Sbjct: 185 AVTDTNCDPDLIDYIIPGNDDAIRAIKLFVTAMADACIEGEALQ 228 >gi|313829426|gb|EFS67140.1| ribosomal protein S2 [Propionibacterium acnes HL063PA2] Length = 277 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 158/222 (71%), Gaps = 8/222 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T RQLLESGV FGH+ WNPKM+R N +IIDL Q++ + KA + +TVA+G Sbjct: 5 TTRQLLESGVHFGHQTRRWNPKMKR------NGIYIIDLHQSLTYIDKAYAFVKETVAKG 58 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + +K Sbjct: 59 GQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAMDFDK 118 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L+IP+ Sbjct: 119 VSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKLKIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ Sbjct: 179 VAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGL 220 >gi|149907553|ref|ZP_01896300.1| 30S ribosomal protein S2 [Moritella sp. PE36] gi|149809223|gb|EDM69152.1| 30S ribosomal protein S2 [Moritella sp. PE36] Length = 242 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 107/220 (48%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM++YIF R+ HII+L QTVP+ AL I + + Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKQYIFGARSKVHIINLEQTVPLFNDALAFIKNVADKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK A + + EAA Q+ V+ +WLGGM+TNWKTV QSI++L LE + + Sbjct: 65 GKVLFVGTKKAAGETIKEAALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLTTLEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ KL+++L GI+ MGGLPD++FV+D + E +AI+EA L IP+V Sbjct: 125 TFEQLTKKEALMNTREMIKLEKSLGGIKTMGGLPDVLFVIDADHEHIAIKEANNLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNSNPD +D+V+PGNDD+ R+I L+ VA+ +G Sbjct: 185 AIVDTNSNPDNIDFVVPGNDDAIRAIKLYAGAVAACVNEG 224 >gi|114321014|ref|YP_742697.1| SSU ribosomal protein S2P [Alkalilimnicola ehrlichii MLHE-1] gi|122311392|sp|Q0A7I0|RS2_ALHEH RecName: Full=30S ribosomal protein S2 gi|114227408|gb|ABI57207.1| SSU ribosomal protein S2P [Alkalilimnicola ehrlichii MLHE-1] Length = 248 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 153/225 (68%), Gaps = 5/225 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +LE+GV FGH+ WNPKM YIF +RN HII+L +T+P+ Q+A+ + Sbjct: 1 MANVSMRDMLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTLPLYQEAMNYVGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG++LFV TK A V E A R V+ +WLGGM+TN++TV SI++L+DLE Sbjct: 61 AAEGGKVLFVGTKRSARKAVREEASRCGMPYVDHRWLGGMLTNFRTVKGSIRRLKDLEA- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TK+E L++ R+ +KL R L GI+DM GLPD MFV+D E +A+QEAR+ Sbjct: 120 -QAEDGTFDKLTKREALSLSREMEKLNRTLSGIKDMNGLPDAMFVIDVGFEHIAVQEARK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 L IP+VAVVDTN++P VDYVIPGNDD+ R+I L+ A A ++ Sbjct: 179 LGIPVVAVVDTNNSPREVDYVIPGNDDAIRAIQLYLSGAADAVLE 223 >gi|308185740|ref|YP_003929871.1| 30S ribosomal protein S2 [Pantoea vagans C9-1] gi|308056250|gb|ADO08422.1| 30S ribosomal protein S2 [Pantoea vagans C9-1] Length = 257 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 21 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRK 80 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+IL V TK A++ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 81 GKILIVGTKRAAAEAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 138 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 139 DGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 198 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 199 VFAIVDTNSDPDGVDFVIPGNDDAIRAVNLYLTAVATTVREG 240 >gi|315655033|ref|ZP_07907937.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 51333] gi|315490689|gb|EFU80310.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 51333] Length = 281 Score = 231 bits (589), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 112/237 (47%), Positives = 161/237 (67%), Gaps = 3/237 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I +R+ +I+DL QT+ + A + + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTDRSGIYILDLQQTIADIDIAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE--LLN 124 G +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ + Sbjct: 65 GTLLFVGTKKQAQESIQEQATRVGMPFVNERWLGGMLTNFSTVHKRLQRLKELEQYDFED 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL + L GIRDM P ++VVDT +E LAI EA++L IP+ Sbjct: 125 TSASGLTKKELLMMCREKDKLAKTLGGIRDMAKTPSAIWVVDTKKEHLAIAEAQKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSA 240 VA++DTN +PD VDY IPGNDD+ R++ L ++A A +G +AR +G + +SA Sbjct: 185 VAILDTNCDPDEVDYGIPGNDDAIRAVDLLTKVIADACAEGLLARSKKQLGENPESA 241 >gi|227504799|ref|ZP_03934848.1| 30S ribosomal protein S2 [Corynebacterium striatum ATCC 6940] gi|227198649|gb|EEI78697.1| 30S ribosomal protein S2 [Corynebacterium striatum ATCC 6940] Length = 268 Score = 231 bits (589), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 169/240 (70%), Gaps = 3/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + E Sbjct: 65 GSVLFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A++EA +L IP+ Sbjct: 125 DGYKGRTKKEILMLTRERIKLERVLGGISEMSKAPSALWIVDTNKEHIAVKEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD VD+ IPGNDD+ R+ L ++A+A +G AR+ + A ++AG++ Sbjct: 185 VAILDTNCDPDEVDFPIPGNDDAIRATKLLSGIIATAVEEGKKAREERQLAAAKEAAGDS 244 >gi|311744116|ref|ZP_07717922.1| 30S ribosomal protein S2 [Aeromicrobium marinum DSM 15272] gi|311313246|gb|EFQ83157.1| 30S ribosomal protein S2 [Aeromicrobium marinum DSM 15272] Length = 323 Score = 231 bits (589), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 116/239 (48%), Positives = 163/239 (68%), Gaps = 5/239 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + + + TVARG Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLAYIDAGYEFVKTTVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + E AKR VN +WLGGM+TN++T+ Q +Q++++LE + + Sbjct: 65 GTILFVGTKRQAQEPIEEQAKRVGMPYVNQRWLGGMLTNFQTMHQRLQRMKELETVDFDD 124 Query: 127 NQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R+ KL R L GIR+MG P +++VDT +E LA+ EA++L IPI Sbjct: 125 VAGSNRTKKELLQMRREYAKLSRTLGGIREMGRTPSAVWIVDTKKEHLAVDEAKKLGIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 +A++DTN +PD VD+ IPGNDD+ RS++L ++A A +G IAR + G + AGE Sbjct: 185 IAILDTNCDPDDVDFPIPGNDDAIRSVSLLTRVIADAVAEGLIARGGAKTGDEV--AGE 241 >gi|167767272|ref|ZP_02439325.1| hypothetical protein CLOSS21_01791 [Clostridium sp. SS2/1] gi|167711247|gb|EDS21826.1| hypothetical protein CLOSS21_01791 [Clostridium sp. SS2/1] Length = 235 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 108/238 (45%), Positives = 160/238 (67%), Gaps = 9/238 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + D VA+GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKDCVAQGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D + A+R + VN +WLGGMMTN+KT+ I +L+ ++E+ +E+ Sbjct: 61 KILFVGTKKQAQDSIQAEAERCGMFYVNQRWLGGMMTNFKTIESRIARLKKIKEM--EED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F K+E L + +++DKL++ L GI +MGGLPD++FVVD +E + +QEA L IP+ Sbjct: 119 GTFDVLPKREVLELNKEKDKLQKNLGGIEEMGGLPDMIFVVDPKKESICVQEAHTLGIPL 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 V + DTNS+P+ +DY+IPGNDD+ R++ L+ SA D + + + AD++ E Sbjct: 179 VGIADTNSDPEELDYIIPGNDDAIRAVK----LITSAMADAVIEANQGIDADSEEVAE 232 >gi|153875861|ref|ZP_02003471.1| Ribosomal protein S2 [Beggiatoa sp. PS] gi|152067675|gb|EDN66529.1| Ribosomal protein S2 [Beggiatoa sp. PS] Length = 260 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 115/225 (51%), Positives = 152/225 (67%), Gaps = 3/225 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM YIF ERN HII+L ++PM A + AR G Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMGPYIFGERNKIHIINLEHSLPMYNDAGNFLGKLAARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A D V EAA R VN +WLGGM+TN+KTV SI++L+DLE L Sbjct: 61 AILFVGTKRAAQDPVKEAALRCGMPYVNRRWLGGMLTNYKTVKASIKRLKDLEILTQDGT 120 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L++ R+ KL+R+L GI+DM LPD +F++D EK+A+QEA +L IP+V Sbjct: 121 LHRITKKEALSLTRELAKLERSLGGIKDMNVLPDALFIIDVGYEKIAVQEAVKLGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVDTN+NP+ VDY+IPGNDD+ R+I L+ + +A I+ +RQ S Sbjct: 181 VVDTNNNPENVDYIIPGNDDAIRAITLYVNGMADTIIE--SRQAS 223 >gi|222054620|ref|YP_002536982.1| ribosomal protein S2 [Geobacter sp. FRC-32] gi|254764478|sp|B9M5C6|RS2_GEOSF RecName: Full=30S ribosomal protein S2 gi|221563909|gb|ACM19881.1| ribosomal protein S2 [Geobacter sp. FRC-32] Length = 255 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 108/239 (45%), Positives = 161/239 (67%), Gaps = 1/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + + Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKSAYNFVFEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R + VN +WLGGM+TN+ TV QSI++L+ ++ + Sbjct: 61 AQAGETMLFVGTKKQAQDSVAEEAQRCGMFFVNDRWLGGMLTNFSTVKQSIERLKRIDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +TKKE L +E++R KL++ L GI+ M LP L+FV+D E++A+ EA++L Sbjct: 121 FADGTIEAYTKKEALQMEKERVKLEKTLGGIKGMNKLPGLLFVIDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +PD +DYVIPGNDD+ R+I L VA A I+G +++ + DT+ A Sbjct: 181 IPVVAIVDTNCDPDNIDYVIPGNDDAIRAIRLLTSKVADAMIEGGQARNTQLQTDTEGA 239 >gi|328675395|gb|AEB28070.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida 3523] Length = 239 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/218 (48%), Positives = 152/218 (69%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPYVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +V+ Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTNS P+ +DY+IPGNDD+ +SI+ + A A ID Sbjct: 184 IVDTNSTPEGIDYIIPGNDDAVKSISFYMKKFADAVID 221 >gi|242278737|ref|YP_002990866.1| ribosomal protein S2 [Desulfovibrio salexigens DSM 2638] gi|259494994|sp|C6C1T1|RS2_DESAD RecName: Full=30S ribosomal protein S2 gi|242121631|gb|ACS79327.1| ribosomal protein S2 [Desulfovibrio salexigens DSM 2638] Length = 259 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 113/245 (46%), Positives = 166/245 (67%), Gaps = 3/245 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++Q+LE+GV FGH+ WNPKM YIF RN HI+DL QTV + +KA I+D VA+G Sbjct: 5 TMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKLFRKAHDFIADNVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LF+ TK QA + + A R+ + V +W+GG +TN++T+ +SI +L+ LEE+ Sbjct: 65 GKVLFIGTKRQAQEAIAAEASRAGMFHVTHRWMGGTLTNFQTIKKSIDRLKKLEEMFEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + F KKE + + R+ KL AL GI+D+ G P + FV+D RE++AIQE R+L IP+V Sbjct: 125 SIKRFPKKEIVMMGREVKKLNLALGGIKDLNGAPAVAFVIDPKREQIAIQECRKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--QHSYMGADTKSAGET 243 AVVD+N +PD+VDY+IPGNDD+ R+I LF +A A ++G AR + M A+ A E Sbjct: 185 AVVDSNCDPDMVDYIIPGNDDAIRAIKLFASHMADACLEGAARRKEDKAMEAEETKAAEK 244 Query: 244 VVHSK 248 V ++ Sbjct: 245 AVETE 249 >gi|157164805|ref|YP_001467386.1| 30S ribosomal protein S2 [Campylobacter concisus 13826] gi|166225253|sp|A7ZF28|RS2_CAMC1 RecName: Full=30S ribosomal protein S2 gi|112801952|gb|EAT99296.1| ribosomal protein S2 [Campylobacter concisus 13826] Length = 262 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/223 (50%), Positives = 151/223 (67%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A G Sbjct: 3 TMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + E Sbjct: 63 KSVLFVGTKKQAIDAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR+M LPD++FVVDT +EK+A+QEA RL+I Sbjct: 120 EDGSINLLTKKEALMLRRKKEKLIATLGGIRNMKSLPDMIFVVDTVKEKIAVQEANRLKI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA +DTN +PD+VDY IPGNDD+ RS+ LFC +A A +G Sbjct: 180 PVVAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEG 222 >gi|269926625|ref|YP_003323248.1| ribosomal protein S2 [Thermobaculum terrenum ATCC BAA-798] gi|269790285|gb|ACZ42426.1| ribosomal protein S2 [Thermobaculum terrenum ATCC BAA-798] Length = 289 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/230 (47%), Positives = 157/230 (68%), Gaps = 7/230 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ LLE+GV FGH+ WNPKM+ YIF ERN HIIDL+QTV L +A ++DTVA Sbjct: 5 INMKALLEAGVHFGHQAKRWNPKMKPYIFTERNGIHIIDLAQTVRALNEAYDFVADTVAN 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA D + E A R+ Q+ VN +W+GGM+TN+ T+ +LR +EEL + Sbjct: 65 GGTVLFVGTKKQAQDAIAEEATRAGQFYVNQRWMGGMLTNFVTIK---SRLRTMEELERR 121 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +G KKE L +ER+ ++L + L G+R M LP +++VVD +E +A+ EA RL Sbjct: 122 KLEGDFDRLPKKEALKLERELERLNKMLGGLRGMDSLPSIVYVVDPRKEYIAVSEANRLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+VA+VDTN +PD++D+VIP NDD+ R++ L +A AA++G R+ S Sbjct: 182 IPVVAMVDTNCDPDVIDWVIPANDDAIRAVRLITSKIADAALEGRMRRES 231 >gi|209695851|ref|YP_002263781.1| 30S ribosomal protein S2 [Aliivibrio salmonicida LFI1238] gi|238054498|sp|B6EK57|RS2_ALISL RecName: Full=30S ribosomal protein S2 gi|208009804|emb|CAQ80111.1| 30S ribosomal protein S2 [Aliivibrio salmonicida LFI1238] Length = 243 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 108/220 (49%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKIGNKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++ E + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAINSDQYYVNNRWLGGMLTNFKTVRQSIKRLKEYEVQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R +KL+++L GI++M GLPD +FV+D + E +A++EA L IP+ Sbjct: 125 TFEQITKKEALMRTRSMEKLEKSLGGIKNMNGLPDALFVIDADHEHIAVKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNSNPD VDY+IPGNDD+ R+I L+ + A + G Sbjct: 185 AVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADSVKSG 224 >gi|88855241|ref|ZP_01129906.1| 30S ribosomal protein S2 [marine actinobacterium PHSC20C1] gi|88815769|gb|EAR25626.1| 30S ribosomal protein S2 [marine actinobacterium PHSC20C1] Length = 347 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 158/225 (70%), Gaps = 1/225 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLL+SGV FGH+ WNPKM+R+I ER+ +HIIDL Q++ + + +TVA G Sbjct: 5 TIRQLLDSGVHFGHQTRRWNPKMKRFILTERSGSHIIDLQQSLAHIDATYDYVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G ILFV TK QA + E A R Q VN +WLGG++TN++TVS+ + ++++LEE+ + Sbjct: 65 GTILFVGTKKQAQGTIAEQALRVGQPYVNQRWLGGLLTNFQTVSKRLARMKELEEVDFDD 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +GFTKKE L +R+ KL+++L GIR++ P +++VDT +E LAI EA +L IP++ Sbjct: 125 TTRGFTKKELLIQKRELVKLQKSLGGIRNLTKTPSAIWIVDTKKEHLAIDEAHKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 A++DTN +PD V Y IPGNDD+ RS+ L +VA AA +G+ ++H Sbjct: 185 AILDTNCDPDDVAYPIPGNDDAIRSVGLLTRIVADAAAEGLIQRH 229 >gi|317153884|ref|YP_004121932.1| 30S ribosomal protein S2 [Desulfovibrio aespoeensis Aspo-2] gi|316944135|gb|ADU63186.1| ribosomal protein S2 [Desulfovibrio aespoeensis Aspo-2] Length = 263 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 105/227 (46%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++Q+LE+GV FGH+ WNPKM +IF RN HI+DL QTV M A I +T A+G Sbjct: 5 TMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIMDLQQTVKMFATAHDFIVNTAAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LF+ TK QA + V + A+R+ + V +W+GG +TN++T+ +SI +L+ LE++ Sbjct: 65 GKVLFIGTKRQAQEAVTQEAQRAGMFYVTHRWMGGTLTNFQTIKKSIDRLKTLEQMFEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +TKKE + + R+ KL AL GI+DM P FV+D RE +AI E R+L IP+V Sbjct: 125 SISRYTKKEAVGMNREVKKLNLALGGIKDMNDAPKAAFVIDPKREHIAIMECRKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 AVVD+N +PD+VDY+IPGNDD+ R+I LF +A A ++G A Q + Sbjct: 185 AVVDSNCDPDMVDYIIPGNDDAIRAIKLFAAHMADACLEGAAMQKDF 231 >gi|254785174|ref|YP_003072602.1| 30S ribosomal protein S2 [Teredinibacter turnerae T7901] gi|259495226|sp|C5BQF6|RS2_TERTT RecName: Full=30S ribosomal protein S2 gi|237686481|gb|ACR13745.1| ribosomal protein S2 [Teredinibacter turnerae T7901] Length = 250 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/230 (48%), Positives = 155/230 (67%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R +L++GV FGH+ WNPKM +YIF RN HII+L TVP AL VI Sbjct: 1 MPTVSMRDMLQAGVHFGHQTRYWNPKMGQYIFGARNKIHIINLEHTVPAFNDALAVIKQM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++ ++LFV TK A V E A+R+ V+++WLGGM+TN+KT+ SI+ RDLE + Sbjct: 61 ASQKKKVLFVGTKRAAQKTVKEQAERAGMPYVSNRWLGGMLTNYKTIRGSIRSYRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R DKL+ ++ GI+DMGGLPD MFV+D E++AIQEA +L Sbjct: 121 SQDGTFEKLTKKEALMRTRTMDKLELSIGGIKDMGGLPDAMFVIDVEHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP++ VVDTNS+P VDYVIPGNDD+ R+I L+ +A A ++G AR+ S Sbjct: 181 IPVIGVVDTNSDPAGVDYVIPGNDDAIRAIKLYVTAMADACLEG-AREGS 229 >gi|206890593|ref|YP_002249337.1| ribosomal protein S2 [Thermodesulfovibrio yellowstonii DSM 11347] gi|238058201|sp|B5YGD9|RS2_THEYD RecName: Full=30S ribosomal protein S2 gi|206742531|gb|ACI21588.1| ribosomal protein S2 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 261 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 117/257 (45%), Positives = 170/257 (66%), Gaps = 10/257 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLE+G FGH+ WNPKM++YIF ERN HIIDL +TV +++A + + A G Sbjct: 5 TMKELLEAGAHFGHQVKRWNPKMKKYIFAERNGIHIIDLQKTVKGIEEAYEFLKTVSAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + E AKR+ + VN +WLGGM+TN+ TV +S++K + +E++ KE Sbjct: 65 GSILFVGTKKQAQDAIQEEAKRAGVFYVNHRWLGGMLTNFATVRKSVEKWQRIEQM--KE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKE E++R KL+ L GI+DM +P +F+VD +EK+A++EA +L IP Sbjct: 123 DGTLYLHTKKEIAKYEKERQKLELNLIGIKDMMEIPKAIFIVDIKKEKIAVEEAIKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 I A+VDTN +PDLVDYVIPGNDD+ R+I L +A A ++G + +M + A + Sbjct: 183 IAAIVDTNCDPDLVDYVIPGNDDAIRAIKLITSKMADAILEG---KEIFMKKLEEEAEKA 239 Query: 244 VVHSKEGMQLEEDSQSS 260 + KE + EE+ Q S Sbjct: 240 AI--KEKILQEEEYQKS 254 >gi|224368817|ref|YP_002602978.1| 30S ribosomal protein S2 [Desulfobacterium autotrophicum HRM2] gi|259494995|sp|C0QB17|RS2_DESAH RecName: Full=30S ribosomal protein S2 gi|223691533|gb|ACN14816.1| RpsB [Desulfobacterium autotrophicum HRM2] Length = 280 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/223 (48%), Positives = 151/223 (67%), Gaps = 1/223 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLE+GV FGH+ WNPKM++YIF RN +I+DL QTV M + A I+D A+G Sbjct: 5 TMRELLEAGVHFGHQTRRWNPKMKKYIFGARNGIYIVDLQQTVKMFRDAYDFITDVTAQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D V E A R+ Y V ++WLGGM+TN++T+ ++I + L + N Sbjct: 65 KSVLFVGTKKQARDSVYEEANRAETYYVQNRWLGGMLTNFQTIKKTISRFEFLSTIENDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + KKER+ + ++R KL+ + GI M LP +FV+D E +A++E +RL IPIV Sbjct: 125 TIEDYPKKERVKMAKERVKLEACIGGISKMKNLPGAIFVIDPKNESIAVKEGKRLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 AVVDTN +PD +DYVIPGNDD+ RSI LF +A AAI+G R Sbjct: 185 AVVDTNCDPDDIDYVIPGNDDAIRSIRLFASKIADAAIEGHQR 227 >gi|324012182|gb|EGB81401.1| ribosomal protein S2 [Escherichia coli MS 60-1] Length = 223 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 108/209 (51%), Positives = 151/209 (72%), Gaps = 1/209 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 A+VDTNS+PD VD+VIPGNDD+ R++ L+ Sbjct: 185 AIVDTNSDPDGVDFVIPGNDDAIRAVTLY 213 >gi|259907542|ref|YP_002647898.1| 30S ribosomal protein S2 [Erwinia pyrifoliae Ep1/96] gi|224963164|emb|CAX54648.1| 30S ribosomal protein S2 [Erwinia pyrifoliae Ep1/96] gi|283477382|emb|CAY73298.1| 30S ribosomal protein S2 [Erwinia pyrifoliae DSM 12163] Length = 243 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/231 (48%), Positives = 156/231 (67%), Gaps = 5/231 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + R L+++G FGH+ WNPKM+ YI+C RN HII+L T PM + A + Sbjct: 1 MATDLISTRDLVQAGAHFGHQTRFWNPKMKPYIYCVRNKVHIINLDITQPMFETASDELE 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +R G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DL Sbjct: 61 EISSREGKILFVGTKRAASEAVKEYALSCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLA 120 Query: 121 ELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + ++ F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 121 --IQSQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEA 178 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 L IP+ A+VDTNS+PD VDY+IPGNDD+ R+I L+ +V++A G ++ Sbjct: 179 NNLGIPVFAIVDTNSDPDGVDYIIPGNDDAIRAIRLYLSIVSAAIRKGCSK 229 >gi|309811477|ref|ZP_07705259.1| ribosomal protein S2 [Dermacoccus sp. Ellin185] gi|308434528|gb|EFP58378.1| ribosomal protein S2 [Dermacoccus sp. Ellin185] Length = 308 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/238 (45%), Positives = 161/238 (67%), Gaps = 4/238 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLTYINDAYEFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA + + E A R +N +WLGGM+TN++T+S+ + +L++LE L + Sbjct: 65 GTILFVGTKKQAQESIAEQATRVGMPYINHRWLGGMLTNFQTISKRLARLKELEALDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G+TKKE L + R++ KL+ L GIR+M +P +++VDT +E LA+ EAR+L +P+ Sbjct: 125 VAGSGYTKKELLLLSREKAKLELVLGGIREMSKIPSAVWIVDTKKEHLAVDEARKLGLPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +A++DTN +PD VDY IPGNDD+ RS+ + ++A A +G+ + S G +SA E Sbjct: 185 IAILDTNCDPDEVDYKIPGNDDAIRSVGILTRVIADAVAEGLVARSS--GKSGESAAE 240 >gi|82409855|gb|ABB73964.1| SSU ribosomal protein S2P [Nitrosospira multiformis ATCC 25196] Length = 260 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 116/243 (47%), Positives = 159/243 (65%), Gaps = 7/243 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ W+PKM YIF RN HII+L +T+ M Q+A+ + A Sbjct: 16 TMRQMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAANK 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D V E A R V+ +WLGGM+TN+KT+ QS+++L D+E ++ Sbjct: 76 GTILFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMMEDG 135 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE L+++R+ +KL R+L GI+DM LPD MFV+D +K AI EAR+L IPIV Sbjct: 136 TLDKLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIPIV 195 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR------QHSYMGADTKS 239 +VD+N +P VDYVIPGNDDSS++I L+ VA A ++G + Q + AD Sbjct: 196 GIVDSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGRNQAIQEIVQGDFEEADEAV 255 Query: 240 AGE 242 AGE Sbjct: 256 AGE 258 >gi|227499526|ref|ZP_03929633.1| ribosomal protein S2 [Anaerococcus tetradius ATCC 35098] gi|227218405|gb|EEI83656.1| ribosomal protein S2 [Anaerococcus tetradius ATCC 35098] Length = 276 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++LLE+GV FGH+ WNPKM +YIF ERN +IIDL +T +++A + D VA G Sbjct: 5 SMKKLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTANQIEEAYATVRDIVADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA D + + AKRS Q+ V+++WLGGM+TN+ T+ QSI KL+ E + +E Sbjct: 65 GKVLFVGTKKQAQDSIEQEAKRSGQFYVSNRWLGGMLTNFGTIRQSINKLKKYEAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L I+++ D+L++ L GI++M LPD++FVVD E +A+ EA+ L IP Sbjct: 123 DGTFDLLPKKEVLQIQKEMDRLEKNLGGIKEMENLPDVLFVVDPGEEAIAVHEAKILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V++VDTN +PDLVD IPGNDD+ R++ L ++A A I+ Sbjct: 183 VVSIVDTNCDPDLVDIAIPGNDDAIRAVKLITSVIADAVIEA 224 >gi|227488619|ref|ZP_03918935.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227543222|ref|ZP_03973271.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51866] gi|227091513|gb|EEI26825.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227181031|gb|EEI62003.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51866] Length = 283 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 107/239 (44%), Positives = 165/239 (69%), Gaps = 3/239 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDQAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A+R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GTILFVGTKKQAQEAIQNEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAMDQAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G KKE L + R+R KL+R L GI DM +P M++VDTN+E +A+ EA +L IP+ Sbjct: 125 DGYAGRGKKEILMLTRERTKLERVLGGIADMSKIPSAMWIVDTNKEHIAVSEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 VA++DTN +PD VDY +PGNDD+ R+ + ++++A +G AR+ + A K+AG+ Sbjct: 185 VAILDTNCDPDEVDYPVPGNDDAIRATTVLTRVISTAVEEGQKARKERELEAAKKAAGD 243 >gi|264679367|ref|YP_003279274.1| ribosomal protein S2 [Comamonas testosteroni CNB-2] gi|299532326|ref|ZP_07045719.1| 30S ribosomal protein S2 [Comamonas testosteroni S44] gi|262209880|gb|ACY33978.1| ribosomal protein S2 [Comamonas testosteroni CNB-2] gi|298719734|gb|EFI60698.1| 30S ribosomal protein S2 [Comamonas testosteroni S44] Length = 250 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 110/244 (45%), Positives = 162/244 (66%), Gaps = 1/244 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A G Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTANG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V E AKR+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQARELVAEEAKRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM GLPD +FV+D K+AI EA++L IP++ Sbjct: 124 LESMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSAGETVV 245 VVDTN NPD +DYVIPGNDDS++++ L+ +A A ++G AR + + A G+ V Sbjct: 184 VVDTNHNPDGIDYVIPGNDDSAKAVQLYAQGIADAILEGREARLNDVVKAAAGENGDEFV 243 Query: 246 HSKE 249 +E Sbjct: 244 EVEE 247 >gi|154174229|ref|YP_001407659.1| 30S ribosomal protein S2 [Campylobacter curvus 525.92] gi|153793063|gb|EAU00943.2| ribosomal protein S2 [Campylobacter curvus 525.92] Length = 289 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 121/276 (43%), Positives = 169/276 (61%), Gaps = 29/276 (10%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+R+IF ER +IIDL +T+ + ++ D A G Sbjct: 29 TMRDLLECGVHFGHQTRRWNPKMKRFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAEG 88 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + E Sbjct: 89 KTILFVGTKKQAVEAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETM---E 145 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR+M LPD++F+VDT +EK+A+QEA RL++ Sbjct: 146 EDGSINLLTKKEALMLRRKKEKLIATLGGIRNMKNLPDMVFIVDTVKEKIAVQEANRLKM 205 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA +DTN +PD+VDY IPGNDD+ RS+ LFC +A A +G Sbjct: 206 PVVAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEG----------------- 248 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 K ++ + D+ + E+ V ++ AVV E MS Sbjct: 249 -----KSLLEQDSDANADEAEVSQEEKDAVVAEAMS 279 >gi|83748807|ref|ZP_00945820.1| SSU ribosomal protein S2P [Ralstonia solanacearum UW551] gi|207723354|ref|YP_002253753.1| 30S ribosomal protein S2 [Ralstonia solanacearum MolK2] gi|207743244|ref|YP_002259636.1| 30s ribosomal protein s2 [Ralstonia solanacearum IPO1609] gi|300704231|ref|YP_003745834.1| 30S ribosomal protein S2 [Ralstonia solanacearum CFBP2957] gi|83724499|gb|EAP71664.1| SSU ribosomal protein S2P [Ralstonia solanacearum UW551] gi|206588553|emb|CAQ35516.1| 30s ribosomal protein s2 [Ralstonia solanacearum MolK2] gi|206594641|emb|CAQ61568.1| 30s ribosomal protein s2 [Ralstonia solanacearum IPO1609] gi|299071895|emb|CBJ43224.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum CFBP2957] Length = 247 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 155/224 (69%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKTSIKRLKDMET--AKE 121 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALDTMSKKEALMFEREMAKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|94310377|ref|YP_583587.1| 30S ribosomal protein S2 [Cupriavidus metallidurans CH34] gi|123383874|sp|Q1LNF8|RS2_RALME RecName: Full=30S ribosomal protein S2 gi|93354229|gb|ABF08318.1| 30S ribosomal subunit protein S2 [Cupriavidus metallidurans CH34] Length = 247 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 157/224 (70%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q AL+ + A Sbjct: 4 TMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTVLFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAA--KE 121 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ +KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALETMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|119477102|ref|ZP_01617338.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2143] gi|119449465|gb|EAW30703.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2143] Length = 257 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 113/225 (50%), Positives = 153/225 (68%), Gaps = 1/225 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM +YIF RN HII+L TVP +AL VI Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMGQYIFGARNKIHIINLEHTVPAFNEALAVIQKLSVGKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS + E A RS+Q V+ +WLGGM+TN+KT+ SI++LRDLE + + Sbjct: 61 KILFVGTKRAASKIMREEADRSSQPYVSHRWLGGMLTNYKTIRGSIKRLRDLEAQQADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R +KL+R++ GI+DMGGLPD +FV+D ++E++AI+EA L IP++ Sbjct: 121 FDKLTKKEALMRTRAMEKLERSIGGIKDMGGLPDALFVIDVDQERIAIKEANSLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTNS+PD VDYVIPGNDD+ R+I L+ VA A + G A S Sbjct: 181 IVDTNSDPDGVDYVIPGNDDAIRAIKLYSAAVADAVLAGKAADGS 225 >gi|300780932|ref|ZP_07090786.1| 30S ribosomal protein S2 [Corynebacterium genitalium ATCC 33030] gi|300532639|gb|EFK53700.1| 30S ribosomal protein S2 [Corynebacterium genitalium ATCC 33030] Length = 326 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 117/270 (43%), Positives = 171/270 (63%), Gaps = 11/270 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GTILFVGTKKQAQEPVQEEADRVGMPYVNHRWLGGMLTNFQTVSKRLARMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G KKE L + R+R KL+R L GI DM P +++VDTN+E +A+ EA +LRIP+ Sbjct: 125 DGYAGRGKKEILMLNRERTKLERVLGGISDMTKTPSALWIVDTNKEHIAVAEAEKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--------IARQHSYMGAD 236 VA++DTN +PD VDY IPGNDD+ RS+ L +V A + G +A+ G D Sbjct: 185 VAILDTNCDPDTVDYPIPGNDDAIRSVKLLTHIVGEAVVAGKQQREERQLAKAREAAG-D 243 Query: 237 TKSAGETVVHSKEGMQLEEDSQSSESSVLD 266 +AG T +Q E + +S +V + Sbjct: 244 APAAGTTQDAGIAEVQAEAPANASGENVAE 273 >gi|209573711|sp|A7GWR7|RS2_CAMC5 RecName: Full=30S ribosomal protein S2 Length = 263 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 121/276 (43%), Positives = 169/276 (61%), Gaps = 29/276 (10%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+R+IF ER +IIDL +T+ + ++ D A G Sbjct: 3 TMRDLLECGVHFGHQTRRWNPKMKRFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + E Sbjct: 63 KTILFVGTKKQAVEAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR+M LPD++F+VDT +EK+A+QEA RL++ Sbjct: 120 EDGSINLLTKKEALMLRRKKEKLIATLGGIRNMKNLPDMVFIVDTVKEKIAVQEANRLKM 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA +DTN +PD+VDY IPGNDD+ RS+ LFC +A A +G Sbjct: 180 PVVAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEG----------------- 222 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 K ++ + D+ + E+ V ++ AVV E MS Sbjct: 223 -----KSLLEQDSDANADEAEVSQEEKDAVVAEAMS 253 >gi|119898200|ref|YP_933413.1| 30S ribosomal protein S2 [Azoarcus sp. BH72] gi|166225238|sp|A1K6S1|RS2_AZOSB RecName: Full=30S ribosomal protein S2 gi|119670613|emb|CAL94526.1| 30S ribosomal protein S2 [Azoarcus sp. BH72] Length = 251 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 168/247 (68%), Gaps = 4/247 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNP+M YIF +RN HI++L +T+ +A+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMVKYNEAMNFVRKLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV+TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L+++E ++ Sbjct: 64 GTILFVSTKRQAREILAEEARRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMIEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + +K+E L + R+ +KL++++ GI+DMGGLPD +F++D K+A+ EA++L IP+V Sbjct: 124 SIERLSKREALTVTRELEKLQKSIGGIKDMGGLPDAIFIIDVGYHKIAVTEAQKLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 VVDTN +P+ +DY+IPGNDDSSR+I L+ VA A ++G + + + G+ V Sbjct: 184 GVVDTNHSPEGIDYIIPGNDDSSRAIRLYARGVADAVLEG---RSQVLQEIVAAGGDEFV 240 Query: 246 HSKEGMQ 252 +EG Q Sbjct: 241 EVEEGSQ 247 >gi|304396644|ref|ZP_07378525.1| ribosomal protein S2 [Pantoea sp. aB] gi|304356153|gb|EFM20519.1| ribosomal protein S2 [Pantoea sp. aB] Length = 241 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 155/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+IL V TK A+ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKILIVGTKRAAAQAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP Sbjct: 123 DGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 183 VFAIVDTNSDPDGVDFVIPGNDDAIRAVNLYLTAVATTVREG 224 >gi|162139865|ref|YP_411356.2| 30S ribosomal protein S2 [Nitrosospira multiformis ATCC 25196] gi|209573698|sp|Q2YBA7|RS2_NITMU RecName: Full=30S ribosomal protein S2 Length = 248 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 116/243 (47%), Positives = 159/243 (65%), Gaps = 7/243 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ W+PKM YIF RN HII+L +T+ M Q+A+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D V E A R V+ +WLGGM+TN+KT+ QS+++L D+E ++ Sbjct: 64 GTILFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMMEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE L+++R+ +KL R+L GI+DM LPD MFV+D +K AI EAR+L IPIV Sbjct: 124 TLDKLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIPIV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR------QHSYMGADTKS 239 +VD+N +P VDYVIPGNDDSS++I L+ VA A ++G + Q + AD Sbjct: 184 GIVDSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGRNQAIQEIVQGDFEEADEAV 243 Query: 240 AGE 242 AGE Sbjct: 244 AGE 246 >gi|260913181|ref|ZP_05919663.1| 30S ribosomal protein S2 [Pasteurella dagmatis ATCC 43325] gi|260632768|gb|EEX50937.1| 30S ribosomal protein S2 [Pasteurella dagmatis ATCC 43325] Length = 240 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNDALVELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK A++ V A QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKILFVGTKRAATEAVKSTALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAAAAVKEG 224 >gi|322420126|ref|YP_004199349.1| 30S ribosomal protein S2 [Geobacter sp. M18] gi|320126513|gb|ADW14073.1| ribosomal protein S2 [Geobacter sp. M18] Length = 255 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A ++D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R Q+ VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQSGDTVLFVGTKKQAQDSVAEEAQRCGQFFVNDRWLGGMLTNFSTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE+L + ++R+KL++ L GI+ MG +P ++FVVD E++A+ EA++L Sbjct: 121 IADGTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD ++YVIPGNDD+ R+I L +A A ++G Sbjct: 181 IPVVAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEG 224 >gi|195953649|ref|YP_002121939.1| 30S ribosomal protein S2 [Hydrogenobaculum sp. Y04AAS1] gi|195933261|gb|ACG57961.1| ribosomal protein S2 [Hydrogenobaculum sp. Y04AAS1] Length = 271 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 110/235 (46%), Positives = 160/235 (68%), Gaps = 7/235 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ LLE+GV FGH WNPKM Y++ RNN HIIDL +TV L++A +SD V++G Sbjct: 4 SMKDLLEAGVHFGHSKGRWNPKMAPYLYGVRNNIHIIDLGKTVLYLEEAYNFVSDAVSKG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D VME A+R + VN +W+GG++TN+KTV +SI KLR LE + E Sbjct: 64 AEMLFVGTKKQAKDVVMEEAQRCESFYVNERWVGGLLTNFKTVRKSIAKLRQLERM---E 120 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + ++R+ +L++ GI DM +PD+++VVDTNRE +A+ EARRL + Sbjct: 121 KEGVFEVLPKKEVVTMKREMQRLQKLYKGIIDMDRIPDIIWVVDTNREHIAVTEARRLGV 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 +VA+ D+N +PD +DY+IPGNDD+ +SI L +A A IDG R+ + ++T Sbjct: 181 KVVAIADSNCDPDEIDYLIPGNDDAIKSIKLLTSRIADAVIDGKQRREASAVSET 235 >gi|253700110|ref|YP_003021299.1| 30S ribosomal protein S2 [Geobacter sp. M21] gi|259495215|sp|C6E512|RS2_GEOSM RecName: Full=30S ribosomal protein S2 gi|251774960|gb|ACT17541.1| ribosomal protein S2 [Geobacter sp. M21] Length = 255 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A ++D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R Q+ VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQAGETVLFVGTKKQAQDSVAEEAQRCGQFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE+L + ++R+KL++ L GI+ MG +P ++FVVD E++A+ EA++L Sbjct: 121 IADGTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD ++YVIPGNDD+ R+I L +A A ++G Sbjct: 181 IPVVAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEG 224 >gi|254482811|ref|ZP_05096048.1| ribosomal protein S2 [marine gamma proteobacterium HTCC2148] gi|214036892|gb|EEB77562.1| ribosomal protein S2 [marine gamma proteobacterium HTCC2148] Length = 287 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 150/221 (67%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM++YIF RN HII+L TVP +AL +++ Sbjct: 1 MRDLLQAGAHFGHQTRYWNPKMDQYIFGARNKIHIINLEHTVPAFNEALDMVTRLAGNKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK A + E A+RS V+ +WLGGM+TN+KT+ SI++ RDLE + + Sbjct: 61 KILFVGTKRAAGKIIKEQAERSGMPYVSHRWLGGMLTNYKTIRASIKRYRDLEAQAADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL+R++ GI+DMGGLPD +FV+D + E++AI EA +L IP++ Sbjct: 121 FERLTKKEALMRTRDMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTNSNPD VDYVIPGNDD+ R+I L+ VA A + G A Sbjct: 181 VVDTNSNPDGVDYVIPGNDDAIRAIKLYVAAVADACMAGKA 221 >gi|90408934|ref|ZP_01217069.1| 30S ribosomal protein S2 [Psychromonas sp. CNPT3] gi|90309962|gb|EAS38112.1| 30S ribosomal protein S2 [Psychromonas sp. CNPT3] Length = 243 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/229 (47%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM KAL + Sbjct: 1 MANVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNKALNFLEAK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G++LFV TK AS+ V EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DL E+ Sbjct: 61 AAKKGKVLFVGTKRAASEVVKEAALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDL-EI 119 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +K+ + TKKE L R+ KL + L GI++MGG+PD++FVVD + E ++I+EA L Sbjct: 120 QSKDGTFEQLTKKEALMRSRELIKLDKTLGGIKNMGGIPDVIFVVDADHEHISIKEANNL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP++A+VDTNS PD +D+V+PGNDD+ R+I L+ + A D A + Sbjct: 180 GIPVIAIVDTNSCPDNIDFVVPGNDDAIRAIKLYLEAAAQTINDARATE 228 >gi|197119129|ref|YP_002139556.1| 30S ribosomal protein S2 [Geobacter bemidjiensis Bem] gi|238690890|sp|B5EHW1|RS2_GEOBB RecName: Full=30S ribosomal protein S2 gi|197088489|gb|ACH39760.1| ribosomal protein S2 [Geobacter bemidjiensis Bem] Length = 255 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A ++D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R Q+ VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQAGETVLFVGTKKQAQDSVAEEAQRCGQFYVNDRWLGGMLTNFATVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE+L + ++R+KL++ L GI+ MG +P ++FVVD E++A+ EA++L Sbjct: 121 IADGTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD ++YVIPGNDD+ R+I L +A A ++G Sbjct: 181 IPVVAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEG 224 >gi|220931609|ref|YP_002508517.1| ribosomal protein S2 [Halothermothrix orenii H 168] gi|254764480|sp|B8CW53|RS2_HALOH RecName: Full=30S ribosomal protein S2 gi|219992919|gb|ACL69522.1| ribosomal protein S2 [Halothermothrix orenii H 168] Length = 262 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 106/223 (47%), Positives = 155/223 (69%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESGV FGH+ WNPKM+ YIF ERN +IIDL +TV +L KA + D ++G Sbjct: 5 TMKQLLESGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVALLDKAYDYVRDMASKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + A+R VN +WLGGM+TN++T+ + +++L +LE++ E Sbjct: 65 KTILFVGTKKQAQETIKTEAERCGMPYVNQRWLGGMLTNFRTIKKRVKRLNELEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + ++++RDKL+R L GIRDM LPD++++ D +E +A+ EAR+L I Sbjct: 122 EDGLFEVLPKKEVILLKKERDKLERFLGGIRDMKNLPDVVYITDPRKESIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV++VDTN +PDL+DY+IPGNDD+ R++ L +A A + G Sbjct: 182 PIVSIVDTNCDPDLIDYIIPGNDDAIRAVKLISSKIADAVLAG 224 >gi|38234087|ref|NP_939854.1| 30S ribosomal protein S2 [Corynebacterium diphtheriae NCTC 13129] gi|61215594|sp|Q6NGK5|RS2_CORDI RecName: Full=30S ribosomal protein S2 gi|38200349|emb|CAE50035.1| 30S ribosomal protein S2 [Corynebacterium diphtheriae] Length = 266 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GTILYVGTKKQAQESVKNEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N +G TKKE L + R+R KL+R L GI DM P M+VVDTN+E +A+ EA +L IP+ Sbjct: 125 NGYEGRTKKEVLMLTRERTKLERVLGGIADMTKTPSAMWVVDTNKEHIAVSEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD+V++ +PGNDD+ RSI + +++ A I+G Sbjct: 185 VAILDTNCDPDVVNFPVPGNDDAIRSIDVLTKVISHAVIEG 225 >gi|282855673|ref|ZP_06264982.1| ribosomal protein S2 [Pyramidobacter piscolens W5455] gi|282586473|gb|EFB91732.1| ribosomal protein S2 [Pyramidobacter piscolens W5455] Length = 271 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 112/264 (42%), Positives = 170/264 (64%), Gaps = 14/264 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L+KA + G Sbjct: 5 SMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVKGLEKAYDFVRSVAKDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A+R Q+ +N +WLGG+MTN+ T+ + +Q++ +LE+ Sbjct: 65 GSVLFVGTKRQAQDTIREEAQRCGQFYINQRWLGGLMTNFATIRKRVQRMIELEKHEADN 124 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G +TKKE ++ KL++ L GI+DM LPD +FV+D RE +A+ EAR+L +P++ Sbjct: 125 DWGDYTKKEISLFRKELAKLEKYLLGIKDMRALPDALFVIDPRRENIAVMEARKLHVPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 ++VDTN +P+++DY IPGNDD+ R+I L C L+A+A I+G GE Sbjct: 185 SIVDTNCDPEMIDYPIPGNDDAIRAIKLICGLMANAVIEG-------------RGGEDGA 231 Query: 246 HSKEGMQLEEDSQSSESSVLDGQE 269 S + E++ +S++S+LD +E Sbjct: 232 VSDAQLPDVEEAAASDASILDMKE 255 >gi|311105983|ref|YP_003978836.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans A8] gi|310760672|gb|ADP16121.1| ribosomal protein S2 [Achromobacter xylosoxidans A8] Length = 249 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 107/219 (48%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L +TV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ + Sbjct: 64 NILFVGTKRAARELVATEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEVVVAEGG 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ DKL +++ GI+DM GLPD +FV+D K+AI EA+ L IP+VA Sbjct: 124 AERMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAIFVIDVGYHKIAIAEAKTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +PD +DYVIPGNDDS+++IAL+ +A A ++G Sbjct: 184 VVDTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEG 222 >gi|119505666|ref|ZP_01627736.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2080] gi|119458478|gb|EAW39583.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2080] Length = 258 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 115/264 (43%), Positives = 164/264 (62%), Gaps = 12/264 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R LL++G FGH+ WNPKM++YIF RN HII+L TVP AL+ + Sbjct: 1 MAQVSMRDLLQAGAHFGHQTRFWNPKMDQYIFGARNKIHIINLEHTVPAFNDALKQVQRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + I+FV TK A + E A R V+ +WLGGM+TN+KTV SI++LR+LEE Sbjct: 61 ASNKSNIMFVGTKRAAGKVIEEQAARCGMPFVSHRWLGGMLTNYKTVRSSIKRLRELEE- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G TKKE L R ++KL R++ GI+DM GLPD++FV+D + E++AI EA Sbjct: 120 --QEADGTFAKLTKKEALMRTRSKEKLDRSVGGIKDMTGLPDVLFVIDVDHERIAITEAN 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IP++ +VDTNSNPD +DYVIPGNDD+ R+I L+ VA A ++G A + + Sbjct: 178 KLGIPVIGIVDTNSNPDGIDYVIPGNDDAIRAIRLYVKAVADAVLEGKAER-----GEVP 232 Query: 239 SAGETVVHSKEGMQLEEDSQSSES 262 + E +V +E D SE+ Sbjct: 233 AVAEDLVEVEEAPTDATDEAESEA 256 >gi|118594913|ref|ZP_01552260.1| 30S ribosomal protein S2 [Methylophilales bacterium HTCC2181] gi|118440691|gb|EAV47318.1| 30S ribosomal protein S2 [Methylophilales bacterium HTCC2181] Length = 254 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 111/220 (50%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM YIF +RN HI++L +T+PM ++AL+ A Sbjct: 4 TMRQMLEAGVHFGHQTRYWNPKMAPYIFGDRNKIHIVNLEKTLPMFEEALKYSKTLAANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GRILFV TK QA D + E A R+ VN +WLGGM+TN+KTV QSI++L +LE + Sbjct: 64 GRILFVGTKRQARDILKEEALRAGCAYVNHRWLGGMLTNFKTVKQSIKRLVELETMFEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + TKKE LN++R DKL+R++ GI++M LPD +FVVD E A+ EA +L IPI+ Sbjct: 124 SLEKITKKEALNLKRDYDKLERSIGGIKNMTALPDAIFVVDVGFESGAVVEATKLGIPII 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN++ D + YVIPGNDDSSR+I L+ +A ++G Sbjct: 184 GVVDTNNSTDNIAYVIPGNDDSSRAIRLYARGMADTILEG 223 >gi|184155190|ref|YP_001843530.1| 30S ribosomal protein S2 [Lactobacillus fermentum IFO 3956] gi|227514721|ref|ZP_03944770.1| ribosomal protein S2 [Lactobacillus fermentum ATCC 14931] gi|238692963|sp|B2GBL8|RS2_LACF3 RecName: Full=30S ribosomal protein S2 gi|183226534|dbj|BAG27050.1| 30S ribosomal protein S2 [Lactobacillus fermentum IFO 3956] gi|227086925|gb|EEI22237.1| ribosomal protein S2 [Lactobacillus fermentum ATCC 14931] gi|299783099|gb|ADJ41097.1| 30S ribosomal protein S2 [Lactobacillus fermentum CECT 5716] Length = 259 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 111/253 (43%), Positives = 167/253 (66%), Gaps = 7/253 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV M+ A + D Sbjct: 1 MPVVSMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKMIDTAYNYVKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRISRLKELKKM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F KKE + ++R+KL+R L GI DM +PD++++VD ++E++A++EA++ Sbjct: 121 --AEDGTFDRLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLYIVDPHKEQIAVKEAQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + A + Sbjct: 179 LHIPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITAKMADAVIEGKQGEDDQQVAPAED 238 Query: 240 AGETVVHSKEGMQ 252 E V S E +Q Sbjct: 239 VAEEV--SDESLQ 249 >gi|152986930|ref|YP_001346867.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PA7] gi|166226359|sp|A6V1D2|RS2_PSEA7 RecName: Full=30S ribosomal protein S2 gi|150962088|gb|ABR84113.1| ribosomal protein S2 [Pseudomonas aeruginosa PA7] Length = 246 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/235 (47%), Positives = 157/235 (66%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD 233 >gi|84498382|ref|ZP_00997179.1| 30S ribosomal protein S2 [Janibacter sp. HTCC2649] gi|84381882|gb|EAP97765.1| 30S ribosomal protein S2 [Janibacter sp. HTCC2649] Length = 319 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 156/222 (70%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q+V + A + + +TVA G Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSVTYINNAYEFVRETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + E A R VN +WLGGM+TN++T+S+ + +L +L+E+ ++ Sbjct: 65 GSILFVGTKKQAQEPIAEQATRVGMPYVNHRWLGGMLTNFQTISKRLTRLVELDEIDFED 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L ++R+RDKL + L GIR M +P +++VDT +E LA+ EAR+L +P+ Sbjct: 125 VAGSGRTKKELLLLKRERDKLDKTLGGIRGMAKVPSAVWIVDTKKEHLAVDEARKLGLPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ Sbjct: 185 IAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGL 226 >gi|319786515|ref|YP_004145990.1| ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1] gi|317465027|gb|ADV26759.1| ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1] Length = 271 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ Q A+ IS Sbjct: 1 MPQITMRQMLEAGVHFGHQTRYWNPKMGPYIFGARGKIHIINLEKTVPLFQDAMNFISGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILF+ TK A D + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARDAMKEEAERCGMPYMTQRWLGGTLTNFRTVKQSVSRLKELEAA 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDALFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VAVVDTN +P+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVVAVVDTNYDPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|269219625|ref|ZP_06163479.1| ribosomal protein S2 [Actinomyces sp. oral taxon 848 str. F0332] gi|269210867|gb|EEZ77207.1| ribosomal protein S2 [Actinomyces sp. oral taxon 848 str. F0332] Length = 296 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 110/222 (49%), Positives = 156/222 (70%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++RQLLE+GV FGH+ WNPKM+RYI ERN+ +IIDL +T+ + + + TVA G Sbjct: 5 SMRQLLEAGVHFGHQTRRWNPKMKRYILTERNSIYIIDLQKTLVDIDRTFDFVKQTVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILF+ TK QA + V E A+R VN +WLGGM+TN+ TV++ +Q+LR+LE++ + Sbjct: 65 GTILFIGTKKQAQEAVREQAERVGMPYVNQRWLGGMLTNFSTVAKRLQRLRELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R++DKL+R L GIRDM +P ++VVDT +E LA+ EA++L IP+ Sbjct: 125 VASSGRTKKELLMMRREKDKLERTLGGIRDMARVPSAVWVVDTKKEHLAVAEAKKLDIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA++DTN +PD V Y IPGNDDS S+ L +VA A +G+ Sbjct: 185 VAILDTNCDPDEVTYPIPGNDDSIGSVGLLTRVVADAVAEGL 226 >gi|271963398|ref|YP_003337594.1| 30S ribosomal protein S2-like protein [Streptosporangium roseum DSM 43021] gi|270506573|gb|ACZ84851.1| Ribosomal protein S2-like protein [Streptosporangium roseum DSM 43021] Length = 317 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 117/239 (48%), Positives = 162/239 (67%), Gaps = 3/239 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+ P T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + Sbjct: 1 MSTPVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLAFIDRAYDFVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG I+F+ TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 ETVAHGGTIMFIGTKKQAQEAIAEQAARVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE 120 Query: 121 EL--LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 EL N G TKKE L R+++KL+R L GIRDM +P ++VVDT +E + I EAR Sbjct: 121 ELDFDNVAASGLTKKELLMRRREKEKLERTLGGIRDMSRVPSAVWVVDTKKEHIGISEAR 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGAD 236 +L IP+VA++DTN +PD VDY IPGNDD+ R++ L +VA A G+ AR + G D Sbjct: 181 KLNIPVVAILDTNCDPDEVDYPIPGNDDAIRAVGLLTRVVADAVAAGLMARAGANRGDD 239 >gi|56459953|ref|YP_155234.1| 30S ribosomal protein S2 [Idiomarina loihiensis L2TR] gi|61215387|sp|Q5QXS0|RS2_IDILO RecName: Full=30S ribosomal protein S2 gi|56178963|gb|AAV81685.1| Ribosomal protein S2 [Idiomarina loihiensis L2TR] Length = 242 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ YIF RN HII+L +TVPM AL + Sbjct: 1 MANVSMRDMLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIINLEKTVPMFNDALSYMQHV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK A++ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNKGKILFVGTKRAAAEAVKEAAINCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL++ L GI++MGGLPD++FV+D + E ++I+EA L Sbjct: 121 SQDGTFEKLTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHISIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP+V+VVDTNSNPD VDY++PGNDD+ R++ L+ + A A Sbjct: 181 IPVVSVVDTNSNPDGVDYIVPGNDDAIRAVQLYLNTAAEA 220 >gi|260662310|ref|ZP_05863206.1| 30S ribosomal protein S2 [Lactobacillus fermentum 28-3-CHN] gi|260553693|gb|EEX26585.1| 30S ribosomal protein S2 [Lactobacillus fermentum 28-3-CHN] Length = 259 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 111/253 (43%), Positives = 167/253 (66%), Gaps = 7/253 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV M+ A + D Sbjct: 1 MPVVSMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKMIDTAYNYVKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRISRLKELKKM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F KKE + ++R+KL+R L GI DM +PD++++VD ++E++A++EA++ Sbjct: 121 --AEDGTFDRLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLYIVDPHKEQIAVKEAQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + A + Sbjct: 179 LHIPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITAKMADAVIEGKQGEDDQQVAPAED 238 Query: 240 AGETVVHSKEGMQ 252 E V S E +Q Sbjct: 239 VAEEV--SDESLQ 249 >gi|300691604|ref|YP_003752599.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum PSI07] gi|299078664|emb|CBJ51322.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum PSI07] Length = 247 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 155/224 (69%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEA--AKE 121 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALDTMSKKEALMFEREMAKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|94676820|ref|YP_588957.1| ribosomal protein S2 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123260523|sp|Q1LSV7|RS2_BAUCH RecName: Full=30S ribosomal protein S2 gi|94219970|gb|ABF14129.1| ribosomal protein S2 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 232 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 153/223 (68%), Gaps = 9/223 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + + +GV FGH+ WNP+M+ +IF RN HII+L QT PM AL ++ +R G Sbjct: 6 MHDMFHAGVHFGHQTRYWNPRMKPFIFGVRNKIHIINLEQTAPMFNNALFELNKIASRKG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-----L 122 +ILFV TK AS+ + EAA+ Q+ VN +WLGGM+TNWKTV QSI+ L++LE Sbjct: 66 KILFVGTKRAASEAIKEAARSCDQFFVNHRWLGGMLTNWKTVRQSIKHLKELETQSQDGT 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L+K TKKE + RK +KL+++L GI+D+GGLPD +FV+D REK+A++EA L I Sbjct: 126 LDK----LTKKEAIICNRKLEKLEKSLGGIKDLGGLPDALFVIDAEREKIAVKEANNLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ AVVDTN++P+ +D++IPGNDD+ R+I L+ VA A +G Sbjct: 182 PVFAVVDTNTDPNGIDFIIPGNDDAIRAINLYLTAVAHAISEG 224 >gi|254513843|ref|ZP_05125904.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] gi|219676086|gb|EED32451.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] Length = 264 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R LL++G FGH+ WNPKM +YIF +RN HII+L TVP +AL ++ Sbjct: 1 MSQVSMRDLLQAGAHFGHQTRYWNPKMGQYIFGDRNKIHIINLEYTVPAFNEALDMVKRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +I+FV TK A + E A+R+ V+ +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 AASKNKIMFVGTKRAAGKIMKEQAERAGMPYVSHRWLGGMLTNYKTIRASIKRLRELEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+R++ GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 QSDGTFAALTKKEALMRARQMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ VVDTNS+PD VDYVIPGNDD+ R+I L+ VA A I G Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIKLYVTAVADACIAG 224 >gi|226327055|ref|ZP_03802573.1| hypothetical protein PROPEN_00916 [Proteus penneri ATCC 35198] gi|225204273|gb|EEG86627.1| hypothetical protein PROPEN_00916 [Proteus penneri ATCC 35198] Length = 242 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 110/223 (49%), Positives = 155/223 (69%), Gaps = 6/223 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTV-PMLQKALQVISDTVAR 65 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TV PM +AL ++ +R Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVVPMFNEALVELNKIASR 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G+ILFV TK A + V EAA+ Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 65 KGKILFVGTKRSAVEAVKEAAESCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLES--QS 122 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ F TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L I Sbjct: 123 QDGTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGI 182 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ A+VDTNS+PD +D++IPGNDD+ R++ L+ A+A +G Sbjct: 183 PVFAIVDTNSDPDGIDFIIPGNDDAIRAVKLYLTAAATAVREG 225 >gi|227484994|ref|ZP_03915310.1| ribosomal protein S2 [Anaerococcus lactolyticus ATCC 51172] gi|227236991|gb|EEI87006.1| ribosomal protein S2 [Anaerococcus lactolyticus ATCC 51172] Length = 286 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++LLE+GV FGH+ WNPKM R+IF ERN +I+DL +T +++A +V+ D VA G Sbjct: 13 SMKKLLEAGVHFGHQTRRWNPKMARFIFTERNGIYIVDLQKTANQIEEAYKVMRDIVADG 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GR+LFV TK QA D + AKRS QY V+ +WLGGM+TN+KT+ +S++KL+ E + +E Sbjct: 73 GRVLFVGTKKQAQDSIQSEAKRSGQYYVSHRWLGGMLTNFKTIRKSVEKLQRYERM--EE 130 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L +++ DKL++ L GI+DM LPD++FVVD E +A+ EA+ L IP Sbjct: 131 DGTFDLLPKKEVLQYQKEMDKLEKNLGGIKDMEELPDVLFVVDPGEEAIAVHEAKILGIP 190 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++A+VDTN +PD VD IPGNDD+ R++ L ++A A I+ Sbjct: 191 VIAIVDTNCDPDEVDVPIPGNDDAIRAVKLITSVMADAVIEA 232 >gi|148982222|ref|ZP_01816651.1| 30S ribosomal protein S2 [Vibrionales bacterium SWAT-3] gi|145960613|gb|EDK25965.1| 30S ribosomal protein S2 [Vibrionales bacterium SWAT-3] Length = 212 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 107/208 (51%), Positives = 152/208 (73%), Gaps = 1/208 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I+ + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAEIAKVGEKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE + + Sbjct: 65 GKVLFVGTKRAASEAVKEAAVNSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L IP+ Sbjct: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 AVVDTNSNPD VD+VIPGNDD+ R++ L Sbjct: 185 AVVDTNSNPDGVDFVIPGNDDAIRAVQL 212 >gi|56964007|ref|YP_175738.1| 30S ribosomal protein S2 [Bacillus clausii KSM-K16] gi|61215395|sp|Q5WFS8|RS2_BACSK RecName: Full=30S ribosomal protein S2 gi|56910250|dbj|BAD64777.1| 30S ribosomal protein S2 [Bacillus clausii KSM-K16] Length = 242 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 107/225 (47%), Positives = 158/225 (70%), Gaps = 5/225 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVETAYNFVRDLAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D V + A R Y +N +WLGG +TN++T+ + I +L++LE++ + Sbjct: 64 GGKILFVGTKKQAQDSVRDEAIRCGMYYINQRWLGGTLTNFETIQKRITRLKNLEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ D+L++ L GI+DM G+PD +FV+D +E++AI EA +L I Sbjct: 122 EDGTFDVLPKKEVILLKKEMDRLEKFLGGIKDMNGVPDALFVIDPRKERIAIAEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ A Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEATA 226 >gi|289208671|ref|YP_003460737.1| ribosomal protein S2 [Thioalkalivibrio sp. K90mix] gi|288944302|gb|ADC72001.1| ribosomal protein S2 [Thioalkalivibrio sp. K90mix] Length = 260 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 106/219 (48%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ W+PKM YIF ERN HII+L +++PM AL + A G Sbjct: 5 TMRQMLEAGVHFGHQTRYWHPKMAPYIFGERNKIHIINLEKSLPMFNDALNFLGKIAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+I+FV TK A + V E A+R V+ +WLGGM+TN+ TV QSI++L+DLE + + Sbjct: 65 GKIMFVGTKRSAREVVAEEARRCGMPFVSHRWLGGMLTNFSTVKQSIKRLKDLETMDADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K+E L R++DKL+R+L GI+DM +PD MFV+D EK+A+ EA++ IP+V Sbjct: 125 SFEVLNKREALTRRREKDKLERSLGGIKDMNRMPDAMFVIDVGYEKIAVAEAKKRGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 AVVD+N +P+ VDYVIPGNDD+ R+I L+ +A I+ Sbjct: 185 AVVDSNHSPEGVDYVIPGNDDAMRAIQLYVAAIADTIIE 223 >gi|220934333|ref|YP_002513232.1| ribosomal protein S2 [Thioalkalivibrio sp. HL-EbGR7] gi|254764498|sp|B8GPS8|RS2_THISH RecName: Full=30S ribosomal protein S2 gi|219995643|gb|ACL72245.1| ribosomal protein S2 [Thioalkalivibrio sp. HL-EbGR7] Length = 275 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 110/212 (51%), Positives = 150/212 (70%), Gaps = 5/212 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF ERN HII+L QT+P+ A+ + G Sbjct: 5 TMRQMLEAGVHFGHQTRYWNPKMAPFIFGERNKIHIINLEQTLPLFNDAMNYLGKLAGNG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK A D + E A R VN +WLGGM+TN+KTV +SI++L+DLE L +E Sbjct: 65 GKILFVGTKRSARDTIAEEALRCKMPYVNHRWLGGMLTNFKTVRESIRRLKDLE--LMRE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F +KKE L R+ +KL+R+L GI+DM GLPD MFV+D EK+A++EA +L IP Sbjct: 123 DGTFNRLSKKEALMRTRELEKLERSLGGIKDMNGLPDAMFVIDVGYEKIAVKEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFC 215 ++AVVDTN++ + VDYVIPGNDD+ R+I L+ Sbjct: 183 VIAVVDTNNSIEGVDYVIPGNDDAMRAIQLYV 214 >gi|291616345|ref|YP_003519087.1| RpsB [Pantoea ananatis LMG 20103] gi|291151375|gb|ADD75959.1| RpsB [Pantoea ananatis LMG 20103] Length = 258 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ W PKM+ +IF RN HII+L +TVPM AL ++ +R Sbjct: 22 SMRDMLKAGVHFGHQTRYWCPKMKPFIFGARNKVHIINLEKTVPMFNDALAELTKISSRK 81 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK A++ + E+A Q+ VN +WLGGM+TNWKTV QSI++L++LE + + Sbjct: 82 GKILFVGTKRAAAEAIKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKELETQSQDG 141 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ Sbjct: 142 TFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVF 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VDYVIPGNDD+ R+I L+ VA+ +G Sbjct: 202 AIVDTNSDPDGVDYVIPGNDDAIRAINLYLTAVATTVREG 241 >gi|15598852|ref|NP_252346.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO1] gi|116051653|ref|YP_789508.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa UCBPP-PA14] gi|218890119|ref|YP_002438983.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa LESB58] gi|296387837|ref|ZP_06877312.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAb1] gi|313109061|ref|ZP_07795033.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 39016] gi|12230937|sp|O82850|RS2_PSEAE RecName: Full=30S ribosomal protein S2 gi|122260796|sp|Q02RC8|RS2_PSEAB RecName: Full=30S ribosomal protein S2 gi|226697646|sp|B7V7F7|RS2_PSEA8 RecName: Full=30S ribosomal protein S2 gi|9949817|gb|AAG07044.1|AE004785_8 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO1] gi|115586874|gb|ABJ12889.1| 30S ribosomal subunit protein S2 [Pseudomonas aeruginosa UCBPP-PA14] gi|218770342|emb|CAW26107.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa LESB58] gi|310881535|gb|EFQ40129.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 39016] Length = 246 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 112/235 (47%), Positives = 157/235 (66%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD 233 >gi|49082262|gb|AAT50531.1| PA3656 [synthetic construct] Length = 247 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 112/235 (47%), Positives = 157/235 (66%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD 233 >gi|221066085|ref|ZP_03542190.1| ribosomal protein S2 [Comamonas testosteroni KF-1] gi|220711108|gb|EED66476.1| ribosomal protein S2 [Comamonas testosteroni KF-1] Length = 250 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 109/244 (44%), Positives = 162/244 (66%), Gaps = 1/244 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A G Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTANG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V E AKR+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQARELVAEEAKRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM GLPD +FV+D K+AI EA++L IP++ Sbjct: 124 LESMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSAGETVV 245 VVDTN NP+ +DYVIPGNDDS++++ L+ +A A ++G AR + + A G+ V Sbjct: 184 VVDTNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGREARLNDVVKAAAGENGDEFV 243 Query: 246 HSKE 249 +E Sbjct: 244 EVEE 247 >gi|332977790|gb|EGK14548.1| 30S ribosomal protein S2 [Psychrobacter sp. 1501(2011)] Length = 263 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 115/255 (45%), Positives = 164/255 (64%), Gaps = 8/255 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A+ Sbjct: 10 MRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKNN 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK AS + E A R+ V+ +WLGGM+TNWKT+ QSI +L++LE+ E+ Sbjct: 70 KVLFVGTKRAASGVIREQALRAGMPYVDHRWLGGMLTNWKTLRQSINRLKELEK--QAED 127 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TK+E L R +KL+R+L GI++MGGLPD +FVVD + E +AI+EA+ L IP+ Sbjct: 128 GTFAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPV 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGADTKSAGE 242 + +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I G A+ + A T++ E Sbjct: 188 IGIVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAGKEYAKTQAGGAAATEAPAE 247 Query: 243 TVVHSKEGMQLEEDS 257 V ++E E DS Sbjct: 248 D-VQTEEAAAPEADS 261 >gi|71064926|ref|YP_263653.1| 30S ribosomal protein S2 [Psychrobacter arcticus 273-4] gi|93005219|ref|YP_579656.1| 30S ribosomal protein S2 [Psychrobacter cryohalolentis K5] gi|122989950|sp|Q1QDT1|RS2_PSYCK RecName: Full=30S ribosomal protein S2 gi|123748153|sp|Q4FUT9|RS2_PSYA2 RecName: Full=30S ribosomal protein S2 gi|71037911|gb|AAZ18219.1| SSU ribosomal protein S2P [Psychrobacter arcticus 273-4] gi|92392897|gb|ABE74172.1| SSU ribosomal protein S2P [Psychrobacter cryohalolentis K5] Length = 264 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 114/273 (41%), Positives = 166/273 (60%), Gaps = 21/273 (7%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +R LL++G FGH+ WNPKM YIF RN HII+L TV +AL ++ A Sbjct: 8 KIEMRDLLQAGAHFGHQTRFWNPKMGPYIFGARNKIHIINLEHTVKAFNEALTYVNGLAA 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + ++LFV TK AS + E A R+ V+ +WLGGM+TNWKT+ QSI +L++LE+ Sbjct: 68 KKNKVLFVGTKRAASGVIAEQAARAGMPYVDHRWLGGMLTNWKTLRQSINRLKELEK--Q 125 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ F TK+E L R +KL+R+L GI+DMGGLPD +FVVD + E +AI+EA+ L Sbjct: 126 AEDGTFAKLTKREALERTRDMEKLERSLGGIKDMGGLPDAIFVVDVDHEAIAIKEAKNLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I AG Sbjct: 186 IPVIGIVDTNSNPDNVDYIIPANDDAIRAVTLYVTSMADAII----------------AG 229 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 + ++ G + E+++ ++E + E A P Sbjct: 230 KEYAQTQAGGKAEQEAPATEEAADAQTEEAATP 262 >gi|299823055|ref|ZP_07054941.1| 30S ribosomal protein S2 [Listeria grayi DSM 20601] gi|299816584|gb|EFI83822.1| 30S ribosomal protein S2 [Listeria grayi DSM 20601] Length = 253 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 157/225 (69%), Gaps = 5/225 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA D V E A+RS QY VN +WLGG +TN+ T+ + IQ L+ +E++ Sbjct: 61 AADNGTILFVGTKKQAQDSVKEEAERSGQYYVNHRWLGGTLTNFDTIKKRIQHLKKIEKM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F KKE + ++++++KL+R L GI++M G+PD MF+VD +E++A+ EAR+ Sbjct: 121 --AEDGTFEVLPKKEVVLLKKEQEKLERFLGGIKEMKGIPDAMFIVDPRKERIAVAEARK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 L IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 179 LNIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|30249680|ref|NP_841750.1| 30S ribosomal protein S2 [Nitrosomonas europaea ATCC 19718] gi|61215747|sp|Q82TZ6|RS2_NITEU RecName: Full=30S ribosomal protein S2 gi|30180717|emb|CAD85629.1| Ribosomal protein S2 [Nitrosomonas europaea ATCC 19718] Length = 251 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 114/224 (50%), Positives = 153/224 (68%), Gaps = 9/224 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM YIF +RN HI++L T+ ML++AL A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMLREALDYARRLTANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL---- 122 G ILFV TK QA D VME A R VN +WLGGM+TN+KT+ QSI++L+D+E++ Sbjct: 64 GTILFVGTKRQARDIVMEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQDG 123 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LNK TKKE L+ +R+ +KL +L GI++M GLPD MFV+D +K AI EA +L Sbjct: 124 TLNK----LTKKEALDFQRELEKLNNSLGGIKEMKGLPDAMFVIDVGYQKGAIVEADKLG 179 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V VVDTN +P V YV+PGNDDSS++I L+ +A A ++G Sbjct: 180 IPVVGVVDTNHSPAGVRYVVPGNDDSSQAIRLYARAMADAILEG 223 >gi|189485405|ref|YP_001956346.1| 30S ribosomal protein S2 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|238058202|sp|B1H053|RS2_UNCTG RecName: Full=30S ribosomal protein S2 gi|170287364|dbj|BAG13885.1| 30S ribosomal protein S2 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 244 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 158/226 (69%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ WNPKM ++IF RN HIIDL +T+ L+K +V+ D Sbjct: 1 MANITMKALLEAGVHFGHQTRRWNPKMAKFIFGMRNKIHIIDLQKTLKELKKNYKVVRDF 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G I+FV TK QA + E A R Y V+ +WLGG +TN++T+ +SI + +++E++ Sbjct: 61 TSTGKDIIFVGTKKQARLPIKEEALRCGAYFVSERWLGGTLTNFETLKKSITRYKEIEDM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 KE F +KKE+ IE++R KL+++L+G+++M LP LMFVVD++ E AI EAR+ Sbjct: 121 --KETGVFKLLSKKEQSRIEKERIKLEKSLEGLKNMSSLPGLMFVVDSHEETTAILEARK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IPIVAV DTN NPDLVDY IPGNDD+ R++ LFC ++A A ++G Sbjct: 179 LEIPIVAVCDTNCNPDLVDYPIPGNDDAIRAVKLFCTVIADAVLEG 224 >gi|172040498|ref|YP_001800212.1| 30S ribosomal protein S2 [Corynebacterium urealyticum DSM 7109] gi|238054500|sp|B1VG89|RS2_CORU7 RecName: Full=30S ribosomal protein S2 gi|171851802|emb|CAQ04778.1| 30S ribosomal protein S2 [Corynebacterium urealyticum DSM 7109] Length = 269 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 157/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GNILFVGTKKQAQEAVANEAERVGMPYVNHRWLGGMLTNFQTVSKRLARMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + QG TKKE L + R+R+KL+R L GI DM +P M+VVDTN+E +A+ EA++L IP+ Sbjct: 125 DGYQGRTKKEILLLNREREKLERVLGGIADMTKVPSAMWVVDTNKEHIAVSEAKKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD V Y +PGNDD+ RS L +++SA +G Sbjct: 185 VAILDTNCDPDEVQYPVPGNDDAIRSANLLTSIISSAVEEG 225 >gi|190573503|ref|YP_001971348.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia K279a] gi|229559896|sp|B2FIA9|RS2_STRMK RecName: Full=30S ribosomal protein S2 gi|190011425|emb|CAQ45043.1| putative 30S ribosomal protein S2 [Stenotrophomonas maltophilia K279a] Length = 268 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 107/229 (46%), Positives = 151/229 (65%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R +N +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA+ Sbjct: 120 --GETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +L IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 KLGIPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|68536252|ref|YP_250957.1| 30S ribosomal protein S2 [Corynebacterium jeikeium K411] gi|260578952|ref|ZP_05846855.1| 30S ribosomal protein S2 [Corynebacterium jeikeium ATCC 43734] gi|123748230|sp|Q4JV18|RS2_CORJK RecName: Full=30S ribosomal protein S2 gi|68263851|emb|CAI37339.1| 30S ribosomal protein S2 [Corynebacterium jeikeium K411] gi|258602926|gb|EEW16200.1| 30S ribosomal protein S2 [Corynebacterium jeikeium ATCC 43734] Length = 277 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 158/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + V A+R VN +WLGGM+TN++TV++ + +L++L+ + E Sbjct: 65 GNILYVGTKKQAQEAVANEAERVGMPYVNHRWLGGMLTNFQTVAKRLHRLKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R+KL+R L GI DM P +++VDTN+E +A+ EA++L IP+ Sbjct: 125 DGYKGRTKKEVLMLTRERNKLERVLGGIADMTKTPSALWIVDTNKEHIAVSEAQKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD+VDY IPGNDD+ RS L +++SA G Sbjct: 185 VAILDTNCDPDVVDYPIPGNDDAIRSANLLTSIISSAVEAG 225 >gi|327392796|dbj|BAK10218.1| 30S ribosomal protein S2 RpsB [Pantoea ananatis AJ13355] Length = 241 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ W PKM+ +IF RN HII+L +TVPM AL ++ +R Sbjct: 5 SMRDMLKAGVHFGHQTRYWCPKMKPFIFGARNKVHIINLEKTVPMFNDALAELTKISSRK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK A++ + E+A Q+ VN +WLGGM+TNWKTV QSI++L++LE + + Sbjct: 65 GKILFVGTKRAAAEAIKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKELETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ Sbjct: 125 TFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTNS+PD VDYVIPGNDD+ R+I L+ VA+ +G Sbjct: 185 AIVDTNSDPDGVDYVIPGNDDAIRAINLYLTAVATTVREG 224 >gi|296117644|ref|ZP_06836228.1| ribosomal protein S2 [Corynebacterium ammoniagenes DSM 20306] gi|295969375|gb|EFG82616.1| ribosomal protein S2 [Corynebacterium ammoniagenes DSM 20306] Length = 265 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 107/240 (44%), Positives = 167/240 (69%), Gaps = 3/240 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRHIFTDRNGIYIIDLQQTLTYIDEAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + E Sbjct: 65 GTVLFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAMDQAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A+ EA +L IP+ Sbjct: 125 DGYKGRTKKEVLMLTRERTKLERVLGGISEMTKAPSALWIVDTNKEHIAVAEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD V++ IPGNDD+ R+ L ++A+A +G +R+ + A ++AG+T Sbjct: 185 VAILDTNCDPDDVNFPIPGNDDAIRATKLLTGIIATAVDEGKKSREERQLAAAKEAAGDT 244 >gi|194365044|ref|YP_002027654.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia R551-3] gi|238693464|sp|B4SQ23|RS2_STRM5 RecName: Full=30S ribosomal protein S2 gi|194347848|gb|ACF50971.1| ribosomal protein S2 [Stenotrophomonas maltophilia R551-3] Length = 267 Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 107/229 (46%), Positives = 151/229 (65%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R +N +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA+ Sbjct: 120 --GETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +L IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 KLGIPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYSRAAADAVLEGKA 226 >gi|297624995|ref|YP_003706429.1| 30S ribosomal protein S2 [Truepera radiovictrix DSM 17093] gi|297166175|gb|ADI15886.1| ribosomal protein S2 [Truepera radiovictrix DSM 17093] Length = 275 Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 115/272 (42%), Positives = 172/272 (63%), Gaps = 10/272 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH WNPK +RYIF ERN IIDL +T+ KA + DT ARGG Sbjct: 6 MKQLLEAGVHFGHETKRWNPKFKRYIFAERNGIFIIDLQKTLQESDKAFDYLKDTAARGG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + A+R +N +WLGG +TN+KT+ +++L++LE + E+ Sbjct: 66 TILFVGTKKQAQEILAAEARRCGMPYLNERWLGGTLTNFKTIRSRVERLKELERMFEDES 125 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KKE++++ ++ +L+R L GI+DM LPD++FV+D +E +A++EA +LRIP+VA Sbjct: 126 ILRYSKKEQIDLGKELQRLQRYLGGIKDMTRLPDVLFVIDPTKEAIAVREANKLRIPVVA 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE---- 242 + DT+S+PD++DY++PGNDD+ RSI L +A ++ R + +SAGE Sbjct: 186 LADTDSDPDVLDYIVPGNDDAIRSIQLVTARLADTIVE--VRGGAAESVSAESAGETERE 243 Query: 243 ---TVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 T V S E M E + SES+ E A Sbjct: 244 TLPTPVSSPEQMIAEAAQRGSESAATGDAEPA 275 >gi|254525018|ref|ZP_05137073.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14] gi|219722609|gb|EED41134.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14] Length = 268 Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 107/229 (46%), Positives = 151/229 (65%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R +N +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA+ Sbjct: 120 --GETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +L IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 KLGIPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|158520491|ref|YP_001528361.1| ribosomal protein S2 [Desulfococcus oleovorans Hxd3] gi|158509317|gb|ABW66284.1| ribosomal protein S2 [Desulfococcus oleovorans Hxd3] Length = 304 Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 110/223 (49%), Positives = 152/223 (68%), Gaps = 1/223 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLESGV FGH+ WNPKM+ YIF RN +IIDL +TV M + A I +G Sbjct: 5 TMKELLESGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVRMFKDAYDFIGHVAEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + E A R+ + V+++WLGGM+TN++T+ +SI +L L EL+N Sbjct: 65 GSVLFVGTKKQARESIYEEANRAEMFYVHNRWLGGMLTNFQTIKKSIDQLHYLNELVNDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + + KKE+ + R+R+KL L GI+ M LP +FV+D +E +A+ EARRL IP+V Sbjct: 125 SIERYPKKEQAGLMRQREKLDSVLGGIQSMTRLPAALFVIDVRKEAIAVGEARRLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 AVVDTN +PD +DYVIPGNDD+ R+I L VA A IDG R Sbjct: 185 AVVDTNCDPDNIDYVIPGNDDAIRAIRLMSSRVADACIDGRKR 227 >gi|285018791|ref|YP_003376502.1| 30s ribosomal protein s2 [Xanthomonas albilineans GPE PC73] gi|283474009|emb|CBA16510.1| probable 30s ribosomal protein s2 [Xanthomonas albilineans] Length = 265 Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 107/229 (46%), Positives = 152/229 (66%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ W+PKM +YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQCRYWHPKMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILF+ TK A D V E A+R Q + +WLGG +TN++T+ QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARDAVKEEAERCGQPFMTQRWLGGTLTNFRTIKQSVARLKELEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G K E L + R+RDKL+ +L GI++M LPD +FV+D E +AI+EA+ Sbjct: 120 --AETDGTFDKLVKHEVLTMRRERDKLEASLGGIKEMNRLPDALFVIDIGHEDIAIKEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +L IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 KLGIPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|296112503|ref|YP_003626441.1| 30S ribosomal protein S2 [Moraxella catarrhalis RH4] gi|295920197|gb|ADG60548.1| 30S ribosomal protein S2 [Moraxella catarrhalis RH4] gi|326561540|gb|EGE11883.1| 30S ribosomal protein S2 [Moraxella catarrhalis 7169] gi|326564121|gb|EGE14359.1| 30S ribosomal protein S2 [Moraxella catarrhalis 46P47B1] gi|326564822|gb|EGE15030.1| 30S ribosomal protein S2 [Moraxella catarrhalis 12P80B1] gi|326566502|gb|EGE16649.1| 30S ribosomal protein S2 [Moraxella catarrhalis 103P14B1] gi|326568010|gb|EGE18102.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC7] gi|326570687|gb|EGE20721.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC1] gi|326571243|gb|EGE21266.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC8] gi|326573075|gb|EGE23048.1| 30S ribosomal protein S2 [Moraxella catarrhalis CO72] gi|326577227|gb|EGE27120.1| 30S ribosomal protein S2 [Moraxella catarrhalis 101P30B1] gi|326577806|gb|EGE27675.1| 30S ribosomal protein S2 [Moraxella catarrhalis O35E] Length = 271 Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 5/224 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q ++R LLE+G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A Sbjct: 8 QISMRDLLEAGAHFGHQTRFWNPKMSQYIFGARNRIHIINLEHTVKQFNEALTFVNKQAA 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +ILFV TK A + E A+R+ V+ +WLGGM+TNWKT+ QSI +L++LE+ Sbjct: 68 ARNKILFVGTKRAAGAVIREQAQRAGMPYVDHRWLGGMLTNWKTLRQSITRLKELEK--Q 125 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ F TK+E L R+ +KL+RAL GI++MGGLPD +FVVD + E +AI+EA+ L Sbjct: 126 AEDGTFAKLTKREALERTRQMEKLERALGGIKEMGGLPDALFVVDVDHEAIAIKEAKNLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ +VDTNSNPD VDYVI NDD+ R+I+L+ +A A I G Sbjct: 186 IPVIGIVDTNSNPDNVDYVIAANDDAIRAISLYVTAMADAIIAG 229 >gi|332284279|ref|YP_004416190.1| 30S ribosomal protein S2 [Pusillimonas sp. T7-7] gi|330428232|gb|AEC19566.1| 30S ribosomal protein S2 [Pusillimonas sp. T7-7] Length = 249 Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 106/219 (48%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM +IF RN HI++L QTV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIVNLEQTVVKYQEAAKFVRQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +LFV TK A + V A R V+S+WLGGMMTN+KTV S+++L+++E +L Sbjct: 64 NVLFVGTKRAARELVAAEAARCGMPYVDSRWLGGMMTNFKTVKTSVKRLKEMEAQLAEGA 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE L +R+ +KL +A+ GI+DM LPD +FV+D K+A+ EAR L IP+VA Sbjct: 124 TERMSKKEALMFDRELEKLNKAIGGIKDMNTLPDALFVIDVGYHKIAVAEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +PD VDY+IPGNDDS+++IAL+ +A A ++G Sbjct: 184 VVDTNHSPDGVDYIIPGNDDSAKAIALYARGMADAVLEG 222 >gi|113868034|ref|YP_726523.1| 30S ribosomal protein S2 [Ralstonia eutropha H16] gi|123133954|sp|Q0KA16|RS2_RALEH RecName: Full=30S ribosomal protein S2 gi|113526810|emb|CAJ93155.1| SSU ribosomal protein S2 [Ralstonia eutropha H16] Length = 248 Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 156/224 (69%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q A++ + A Sbjct: 4 TMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTILFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAA--KE 121 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K+A+ EA +L +P Sbjct: 122 AGALETMSKKEALMFEREMLKLEKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEANKLGVP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|298529661|ref|ZP_07017064.1| ribosomal protein S2 [Desulfonatronospira thiodismutans ASO3-1] gi|298511097|gb|EFI35000.1| ribosomal protein S2 [Desulfonatronospira thiodismutans ASO3-1] Length = 264 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 156/224 (69%), Gaps = 1/224 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++Q+LE+GV FGH+ WNPKM+ YIF R HIIDL QTV + Q A ISDTVA G Sbjct: 5 TMKQMLETGVHFGHQTKRWNPKMKPYIFGSRKGIHIIDLQQTVKLYQYAHDFISDTVAGG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++LFV TK QA + + A+R+ + V ++WLGG +TN++T+ +SI++L+ LE + Sbjct: 65 KKVLFVGTKRQAREVINTEAQRADMFYVTNRWLGGTLTNFQTIRKSIERLKTLERMFEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + F KKE ++R+ +KL L GI+DM LP F++D +E++AI+E R+L IPI Sbjct: 125 SVHRFVKKEVAMMQREVNKLNADLGGIKDMDSLPGAAFIIDPKKEEIAIKECRKLNIPIA 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 AVVDTN +PDL+D+VIPGNDD+ R+I LF +A A ++G+A++ Sbjct: 185 AVVDTNCDPDLIDFVIPGNDDAIRAIKLFAGSMADACLEGMAKR 228 >gi|332976814|gb|EGK13642.1| 30S ribosomal protein S2 [Desmospora sp. 8437] Length = 234 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 160/222 (72%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKME+YIF ERN +IIDL +TV M+++ + D ++G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMEKYIFTERNGIYIIDLQKTVKMMEETYNYVRDLASKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK QA D V E A+RS + VN +WLGG +TN++T+ + I +L LE + +E Sbjct: 65 GKILFVGTKKQAQDAVREEAERSGMFYVNHRWLGGTLTNFQTIRKRIDRLHKLEAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + +++++ +L++ L GI+ M LPD +F++D +E++A+ EAR+L IP Sbjct: 123 DGTFEVLPKKEVVMLKKEQARLEKFLGGIKHMKELPDAVFIIDPRKERIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+A+VDTN +PD +D++IPGNDD+ R++ LF +A A+++G Sbjct: 183 IIAIVDTNCDPDEIDHIIPGNDDAIRAVRLFTSKMADASLEG 224 >gi|319441373|ref|ZP_07990529.1| 30S ribosomal protein S2 [Corynebacterium variabile DSM 44702] Length = 279 Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 107/242 (44%), Positives = 168/242 (69%), Gaps = 3/242 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTFIDEAYEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + + A+R VN +WLGGM+TN++TV++ +++L++L+ + + E Sbjct: 65 GNILYVGTKKQAQEGIASEAERVGMPYVNHRWLGGMLTNFQTVAKRLRRLKELQAMDSAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G TKKE L + R+R+KL+R L GI DM +P +++VDTN+E +A+ EA++L IP+ Sbjct: 125 DGYAGRTKKEILMLTRERNKLERVLGGIADMSKVPSALWIVDTNKEHIAVAEAKKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGET 243 VA++DTN +PD+VD+ IPGNDD+ R+ L +++SA +G R A ++AG+ Sbjct: 185 VAILDTNCDPDVVDFPIPGNDDAIRATNLLTSVISSAVEEGRKVRAERQAAAAKETAGDA 244 Query: 244 VV 245 V Sbjct: 245 EV 246 >gi|226945941|ref|YP_002801014.1| 30S ribosomal protein S2 [Azotobacter vinelandii DJ] gi|259494989|sp|C1DSU6|RS2_AZOVD RecName: Full=30S ribosomal protein S2 gi|226720868|gb|ACO80039.1| 30S ribosomal protein S2 [Azotobacter vinelandii DJ] Length = 246 Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 112/233 (48%), Positives = 156/233 (66%), Gaps = 3/233 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R +L++G FGH+ WNPKM RYIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVTMRDMLKAGCHFGHQTRYWNPKMGRYIFGARNKIHIINLEKTLPMFNEALSFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R + V+ +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 AAGKNKILFVGTKRSAGRLVREEAARCSMPYVDHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD MFV+D + E++AI EA +L Sbjct: 121 SQDGTFAKLTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP++ VVDTNS+P+ VDY+IPGNDD+ R++ L+ VA A + G RQ++ G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAVQLYLGSVADAVLRG--RQNAGTG 231 >gi|322379387|ref|ZP_08053758.1| 30S ribosomal protein S2 [Helicobacter suis HS1] gi|322380330|ref|ZP_08054541.1| 30S ribosomal protein S2 [Helicobacter suis HS5] gi|321147237|gb|EFX41926.1| 30S ribosomal protein S2 [Helicobacter suis HS5] gi|321148205|gb|EFX42734.1| 30S ribosomal protein S2 [Helicobacter suis HS1] Length = 261 Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 111/222 (50%), Positives = 150/222 (67%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE GV FGH+ WNPK R+IF R N HIIDL +T+ + ++ D A G Sbjct: 1 MKDLLECGVHFGHQTRRWNPKTARFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 I+FV TK QASD + E A + VN +WLGGM+TN T+ +S++KL +EE+ EN Sbjct: 61 TIMFVGTKKQASDTLKEYATQVNVPYVNYRWLGGMLTNLSTIRKSVRKLEIMEEM---EN 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G TKKE+L I RK++KL++ L G+R M +PD+MF++D +EK+A+ EARRL IP Sbjct: 118 SGQIDLLTKKEKLMILRKKEKLEKYLGGVRHMKKMPDMMFIIDVVKEKIAVAEARRLGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+A +DTN +PDLVDY IPGNDD+ RSIALFC +A A +G Sbjct: 178 IIAPLDTNCDPDLVDYPIPGNDDAIRSIALFCKEMAEAITEG 219 >gi|257066450|ref|YP_003152706.1| 30S ribosomal protein S2 [Anaerococcus prevotii DSM 20548] gi|256798330|gb|ACV28985.1| ribosomal protein S2 [Anaerococcus prevotii DSM 20548] Length = 280 Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 109/232 (46%), Positives = 160/232 (68%), Gaps = 7/232 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++LLE+GV FGH+ WNPKM +YIF ERN +IIDL +T +++A + D VA G Sbjct: 5 SMKKLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTAVQIEEAYAQVRDIVADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GR+LFV TK QA D + + AKRS Q+ V+++WLGGM+TN+KT+ QSI KL+ E + +E Sbjct: 65 GRVLFVGTKKQAQDSIEQEAKRSGQFYVSNRWLGGMLTNFKTIRQSINKLKKYEAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L +++ D+L++ L GI++M LPDL+FVVD E +A+ EA+ L IP Sbjct: 123 DGTFDLLPKKEVLQYQKEMDRLEKNLGGIKEMEDLPDLLFVVDPGEEAIAVHEAKILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 ++++VDTN +PD VD IPGNDD+ R++ L ++A A ++ A Q S A Sbjct: 183 VISIVDTNCDPDEVDLAIPGNDDAIRAVKLITSVIADAVVE--ANQGSQFDA 232 >gi|90022242|ref|YP_528069.1| 30S ribosomal protein S2 [Saccharophagus degradans 2-40] gi|123395864|sp|Q21HH2|RS2_SACD2 RecName: Full=30S ribosomal protein S2 gi|89951842|gb|ABD81857.1| SSU ribosomal protein S2P [Saccharophagus degradans 2-40] Length = 246 Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 154/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R +L++GV FGH+ WNPKM +YIF RN HII+L TVP +AL ++ Sbjct: 1 MPTVSMRDMLQAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNEALAIVKQL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++ ++LFV TK A + E A+RS V+ +WLGGM+TN+KT+ SI++ R+LE + Sbjct: 61 GSQKKKVLFVGTKRAAQKSIKEQAERSNMPFVSHRWLGGMLTNYKTIRASIRRYRELETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL++++ GI+DMGGLPD +F++D E++AIQEA +L Sbjct: 121 SQDGTFEKLTKKEALVRTRIMEKLEKSIGGIKDMGGLPDALFIIDVEHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ VVDTNS+P VDYVIPGNDD+ R+I L+ VA A I+G A Sbjct: 181 IPVIGVVDTNSDPAGVDYVIPGNDDAIRAIKLYATAVADACIEGAA 226 >gi|256545170|ref|ZP_05472536.1| 30S ribosomal protein S2 [Anaerococcus vaginalis ATCC 51170] gi|256399211|gb|EEU12822.1| 30S ribosomal protein S2 [Anaerococcus vaginalis ATCC 51170] Length = 256 Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 156/221 (70%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH+ WNPKM+++IF ERN +IIDL++T ++KA + I D + GG Sbjct: 1 MKKLLEAGVHFGHQTRRWNPKMKKFIFTERNGIYIIDLAKTANQIEKAYETIRDIASEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LFV TK QA D + + AKR QY V+++WLGGM+TN+ T+ S+ KL+ E + +E+ Sbjct: 61 TVLFVGTKKQAQDSIEQEAKRCGQYYVSNRWLGGMLTNFNTIRNSVNKLKKYETM--EED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE L ++ DKL++ L GI+DM LPD++FVVD + E++A+ EAR L IP+ Sbjct: 119 GTFDLLPKKEVLQYNKEMDKLEKNLGGIKDMEDLPDVLFVVDPSNEQIAVHEARILGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++VDTN +PD+VD IPGNDD+ R++ L L+A A I+G Sbjct: 179 ISIVDTNCDPDVVDIAIPGNDDAIRAVKLITSLMADAVIEG 219 >gi|50954905|ref|YP_062193.1| 30S ribosomal protein S2 [Leifsonia xyli subsp. xyli str. CTCB07] gi|61215512|sp|Q6AEV7|RS2_LEIXX RecName: Full=30S ribosomal protein S2 gi|50951387|gb|AAT89088.1| 30S ribosomal protein S2 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 298 Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 159/225 (70%), Gaps = 1/225 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SGV FGH+ WNPKM+R+I ER+ ++IIDL Q++ + K + +TVA G Sbjct: 5 TMRQLLDSGVHFGHQTRRWNPKMKRFILTERSGSYIIDLQQSLTYIDKTYDFVRETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G ILFV TK QA + E A R Q VN +WLGG++TN++TVS+ + ++++LEEL Sbjct: 65 GTILFVGTKKQAQQAIAEQATRVGQPYVNQRWLGGLLTNFQTVSKRLARMKELEELDFEG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 GFTKKE L +R+ DKL ++L GIR++ P ++VVDT +E LAI EA++L IP++ Sbjct: 125 TTSGFTKKELLIKKRELDKLHKSLGGIRNLSKTPSALWVVDTKKEHLAIDEAKKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 A++DTN +PD V Y IPGNDD+ RS++L +VA AA +G+ ++H Sbjct: 185 AILDTNCDPDEVQYPIPGNDDAIRSVSLLTHIVADAAAEGLIQRH 229 >gi|317406268|gb|EFV86512.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans C54] Length = 249 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 105/219 (47%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM +IF RN HII+L +TV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ + Sbjct: 64 NILFVGTKRAARELVAAEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGG 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ +KL +++ GI+DM GLPD MFV+D K+AI EA+ L IP+VA Sbjct: 124 AERMIKKEGLLFQRELEKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +P+ +DYVIPGNDDS+++IAL+ +A A ++G Sbjct: 184 VVDTNHSPEGIDYVIPGNDDSAKAIALYAKGIADAVLEG 222 >gi|209573688|sp|A5WCX2|RS2_PSYWF RecName: Full=30S ribosomal protein S2 Length = 262 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 150/221 (67%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A+ Sbjct: 10 MRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKNN 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK AS + E A R+ Q V+ +WLGGM+TNWKT+ QSI +L++LE+ E+ Sbjct: 70 KVLFVGTKRAASGVIREQALRAGQPYVDHRWLGGMLTNWKTLRQSINRLKELEK--QAED 127 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TK+E L R +KL+R+L GI++MGGLPD +FVVD + E +AI+EA+ L IP+ Sbjct: 128 GTFAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPV 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I G Sbjct: 188 IGIVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAG 228 >gi|95928708|ref|ZP_01311454.1| ribosomal protein S2 [Desulfuromonas acetoxidans DSM 684] gi|95135053|gb|EAT16706.1| ribosomal protein S2 [Desulfuromonas acetoxidans DSM 684] Length = 256 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 160/241 (66%), Gaps = 5/241 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A + Sbjct: 1 MAKVTMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQRTVRYFRSAYNFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA D + E A R+ QY VN +WLGGM+TN+ T+ SI +L+ +E + Sbjct: 61 VENGDSILFVGTKKQAQDSIREEADRAGQYYVNHRWLGGMLTNFATIKGSIDRLKKIETM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L ++R+R KL++ L GI+ M LP MFV+D +E +A+ EA++ Sbjct: 121 --SEDGTFELLTKKECLQLDRERIKLEKNLGGIKGMTKLPGAMFVIDPKKEAIAVCEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVDTN +PD +DY+IPGNDD+ R+I LF +A A+I+G + + + ++ + Sbjct: 179 LGIPVVAVVDTNCDPDEIDYIIPGNDDAIRAIRLFVSSMADASIEGAQAREAAICSENEG 238 Query: 240 A 240 A Sbjct: 239 A 239 >gi|117928749|ref|YP_873300.1| SSU ribosomal protein S2P [Acidothermus cellulolyticus 11B] gi|166225231|sp|A0LV54|RS2_ACIC1 RecName: Full=30S ribosomal protein S2 gi|117649212|gb|ABK53314.1| SSU ribosomal protein S2P [Acidothermus cellulolyticus 11B] Length = 275 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 114/241 (47%), Positives = 165/241 (68%), Gaps = 4/241 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LL GV FGH+ WNPKM+R+IF ERN +IIDL Q++ +++A + + DTVARG Sbjct: 5 TMKELLAGGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIERAYEFVKDTVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + E A R VN +WLGGM+TN+ TV + +Q+L++L ELL + Sbjct: 65 GTVLFVGTKKQAQQAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKEL-ELLEQN 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F TKKE L ++R+++KL+R L GIRDM LP +++VDT +E +A+ EAR+L IP Sbjct: 124 GSLFGQATKKEALMLQREKEKLERTLGGIRDMTRLPAAVWIVDTKKEHIAVDEARKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA++DTN +PD VDY IPGNDD+ RS++L ++A A +G+ + + D K E Sbjct: 184 VVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVIADAVAEGLMARAAARATDGKPEPEP 243 Query: 244 V 244 V Sbjct: 244 V 244 >gi|256847038|ref|ZP_05552484.1| ribosomal protein S2 [Lactobacillus coleohominis 101-4-CHN] gi|256715702|gb|EEU30677.1| ribosomal protein S2 [Lactobacillus coleohominis 101-4-CHN] Length = 260 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 155/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV M+ A + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMEPYIFTERNGIYIIDLQKTVKMIDSAYDYVKNVAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ E Sbjct: 65 GVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRINRLKELKKM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++R+KL+R L GI DM +PD++++VD ++E++A++EA +L IP Sbjct: 123 DGTFDVLPKKEVSVLTKQREKLERFLGGIEDMPRIPDVIYIVDPHKEQIAVREAHKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 183 IVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAVIEG 224 >gi|152995301|ref|YP_001340136.1| 30S ribosomal protein S2 [Marinomonas sp. MWYL1] gi|189044943|sp|A6VUS2|RS2_MARMS RecName: Full=30S ribosomal protein S2 gi|150836225|gb|ABR70201.1| ribosomal protein S2 [Marinomonas sp. MWYL1] Length = 244 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 151/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R LL G FGH+ WNPKM+ +IF RN HII+L TVP L AL+++ Sbjct: 1 MPTVSMRDLLLVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNNALELVKKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++LFV TK AS + E A RS VN +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 AENKNKVLFVGTKRAASKTIKEQAARSGMPYVNHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ ++ GI+DMGGLPD++FVVD + E++AI+EA +L Sbjct: 121 MSDGTFDKLTKKEALMRTRELEKLELSMGGIKDMGGLPDVLFVVDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ +VDTNSNPD VDY+IP NDD+ R++ L+ A A ++G Sbjct: 181 IPVIGIVDTNSNPDGVDYIIPANDDAIRAVQLYVGAFADAVLEG 224 >gi|117925137|ref|YP_865754.1| 30S ribosomal protein S2P [Magnetococcus sp. MC-1] gi|166225282|sp|A0L8Q5|RS2_MAGSM RecName: Full=30S ribosomal protein S2 gi|117608893|gb|ABK44348.1| SSU ribosomal protein S2P [Magnetococcus sp. MC-1] Length = 262 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 108/262 (41%), Positives = 177/262 (67%), Gaps = 2/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++R+LLE+G FGH+ WNPKM+R+IF RN HII+L ++V ML+ A + DT Sbjct: 1 MAKYSVRELLEAGFHFGHQTKRWNPKMKRHIFGARNGVHIINLQKSVVMLRDACNFVRDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG +LFV TK QA + V A+R+ Q+ VN +WLGG +TNW+T+ SI++L++++++ Sbjct: 61 VQGGGTVLFVGTKRQAVELVSAEARRTGQFYVNHRWLGGTLTNWRTIQGSIRRLKEIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + TK+E ++R+ K++RAL GI+DM P+L+ VVDT +E +A++EA +L Sbjct: 121 RVDGTFEALTKRETQQLDREGQKIERALGGIKDMERQPNLIIVVDTRKESIAVKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VD+N +PD +DY +PGNDD+ R++ LF + + I+G+ + SAG Sbjct: 181 IPVVALVDSNCDPDPIDYPVPGNDDAIRALTLFISKMGDSVIEGMQLAGREIPNSGISAG 240 Query: 242 ETVVHSKEGMQL-EEDSQSSES 262 E + ++ Q E + QS+E+ Sbjct: 241 EGSMEAQMLSQAGEGEMQSAEA 262 >gi|46198817|ref|YP_004484.1| 30S ribosomal protein S2 [Thermus thermophilus HB27] gi|55980830|ref|YP_144127.1| 30S ribosomal protein S2 [Thermus thermophilus HB8] gi|24212665|sp|P80371|RS2_THET8 RecName: Full=30S ribosomal protein S2 gi|50401226|sp|P62662|RS2_THET2 RecName: Full=30S ribosomal protein S2 gi|10835586|pdb|1FJG|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin gi|13096395|pdb|1HR0|B Chain B, Crystal Structure Of Initiation Factor If1 Bound To The 30s Ribosomal Subunit gi|13399793|pdb|1HNW|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Tetracycline gi|13399815|pdb|1HNX|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Pactamycin gi|13399837|pdb|1HNZ|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Hygromycin B gi|14278011|pdb|1GIX|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1gix, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|14278057|pdb|1IBK|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotic Paromomycin gi|14278078|pdb|1IBL|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site And With The Antibiotic Paromomycin gi|14278102|pdb|1IBM|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site gi|15826121|pdb|1JGO|E Chain E, The Path Of Messenger Rna Through The Ribosome. This File, 1jgo, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826146|pdb|1JGP|E Chain E, The Path Of Messenger Rna Through The Ribosome. This File, 1jgp, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826171|pdb|1JGQ|E Chain E, The Path Of Messenger Rna Through The Ribosome. This File, 1jgq, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|20663887|pdb|1J5E|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit gi|27065877|pdb|1N32|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position At The A Site With Paromomycin gi|27065904|pdb|1N33|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position At The A Site With Paromomycin gi|27065931|pdb|1N34|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Codon And Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position gi|27065957|pdb|1N36|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Crystallographically Disordered Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position gi|28373700|pdb|1ML5|E Chain E, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|58177401|pdb|1XMO|B Chain B, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed With Aag-Mrna In The Decoding Center gi|58177424|pdb|1XMQ|B Chain B, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The Decoding Center gi|58177465|pdb|1XNQ|B Chain B, Structure Of An Inosine-Adenine Wobble Base Pair Complex In The Context Of The Decoding Center gi|58177488|pdb|1XNR|B Chain B, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair In The Context Of The Decoding Center gi|66361055|pdb|1YL4|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. 30s Subunit. The Coordinates For The 50s Subunit Are In The Pdb Entry 1yl3 gi|88192237|pdb|2B64|B Chain B, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|88192300|pdb|2B9M|B Chain B, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400. gi|88192356|pdb|2B9O|B Chain B, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site. This File Contains The 30s Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site And Is Described In Remark 400. gi|110591324|pdb|2F4V|B Chain B, 30s Ribosome + Designer Antibiotic gi|116667655|pdb|2HHH|B Chain B, Crystal Structure Of Kasugamycin Bound To The 30s Ribosomal Subunit gi|116668198|pdb|2J00|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule I. gi|116668259|pdb|2J02|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4) This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule Ii. gi|119389713|pdb|2HGI|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgj. gi|119389770|pdb|2HGP|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgq. gi|119389826|pdb|2HGR|E Chain E, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgu. gi|149242709|pdb|2OW8|CC Chain c, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 2ow8, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsa. gi|149243619|pdb|2UU9|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gug-Codon In The A-Site And Paromomycin. gi|149243646|pdb|2UUA|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guc-Codon In The A-Site And Paromomycin. gi|149243673|pdb|2UUB|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guu-Codon In The A-Site And Paromomycin. gi|149243700|pdb|2UUC|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gua-Codon In The A-Site And Paromomycin. gi|149243839|pdb|2UXC|B Chain B, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Ucgu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836409|pdb|2UXB|B Chain B, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Gggu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836486|pdb|2V46|B Chain B, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 1. gi|157836542|pdb|2V48|B Chain B, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 3 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 2. gi|158430901|pdb|2UXD|B Chain B, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Cggg In The Context Of The Thermus Thermophilus 30s Subunit. gi|160285940|pdb|2QNH|CC Chain c, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 2qnh, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsp. gi|165760897|pdb|2OM7|N Chain N, Structural Basis For Interaction Of The Ribosome With The Switch Regions Of Gtp-Bound Elongation Factors gi|186972850|pdb|2VQE|B Chain B, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|186972873|pdb|2VQF|B Chain B, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|209156497|pdb|3D5A|B Chain B, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156553|pdb|3D5C|B Chain B, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938820|pdb|2JL5|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938878|pdb|2JL7|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|218766774|pdb|3F1E|B Chain B, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766830|pdb|3F1G|B Chain B, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887375|pdb|2WDG|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887400|pdb|2WDH|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|226887489|pdb|2WDK|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887546|pdb|2WDM|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|237823530|pdb|2WH1|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823589|pdb|2WH3|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit. gi|260099987|pdb|3HUW|B Chain B, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule I. gi|260100043|pdb|3HUY|B Chain B, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule Ii. gi|261824485|pdb|2WRI|B Chain B, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 1 Of 4). gi|261824547|pdb|2WRK|B Chain B, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 3 Of 4). gi|261824609|pdb|2WRN|B Chain B, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 1 Of 4). gi|261824668|pdb|2WRQ|B Chain B, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 3 Of 4). gi|281307168|pdb|3KIQ|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 1 Of 4) gi|281307226|pdb|3KIS|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 3 Of 4) gi|281307284|pdb|3KIU|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 1 Of 4) gi|281307342|pdb|3KIX|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 3 Of 4) gi|288965605|pdb|3KNH|B Chain B, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526683|pdb|3KNJ|B Chain B, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii' gi|289526708|pdb|3KNL|B Chain B, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526733|pdb|3KNN|B Chain B, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii gi|294979505|pdb|3I8G|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979530|pdb|3I8H|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979589|pdb|3I9B|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B. The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979643|pdb|3I9D|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A. The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982076|pdb|2X9R|B Chain B, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982135|pdb|2X9T|B Chain B, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|307567963|pdb|2XFZ|B Chain B, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 1 Of 4) gi|307568021|pdb|2XG1|B Chain B, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 3 Of 4) gi|307776613|pdb|3OTO|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga Mutant Of Thermus Thermophilus (Hb8) gi|309320236|pdb|3OGE|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320257|pdb|3OGY|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320338|pdb|3OHC|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320359|pdb|3OHD|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320440|pdb|3OHY|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320491|pdb|3OI0|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320542|pdb|3OI2|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320593|pdb|3OI4|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207674|pdb|2XQD|B Chain B, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754000|pdb|2XSY|B Chain B, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754115|pdb|2XUY|B Chain B, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533403|pdb|2Y0U|B Chain B, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533462|pdb|2Y0W|B Chain B, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533521|pdb|2Y0Y|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533580|pdb|2Y10|B Chain B, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533639|pdb|2Y12|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533698|pdb|2Y14|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533757|pdb|2Y16|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533816|pdb|2Y18|B Chain B, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|13446664|emb|CAC35061.1| ribosomal protein S2 [Thermus thermophilus HB27] gi|46196440|gb|AAS80857.1| SSU ribosomal protein S2P [Thermus thermophilus HB27] gi|55772243|dbj|BAD70684.1| 30S ribosomal protein S2 [Thermus thermophilus HB8] Length = 256 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/244 (45%), Positives = 158/244 (64%), Gaps = 5/244 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D Sbjct: 4 EITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAM 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 RGG ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L Sbjct: 64 RGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFA 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + E + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP Sbjct: 124 SPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALF----CDLVASAAIDGIARQHSYMGADTKS 239 ++A+ DT+S+PDLVDY+IPGNDD+ RSI L DL+ A + SY Sbjct: 184 VIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQEAE 243 Query: 240 AGET 243 A ET Sbjct: 244 ATET 247 >gi|78042772|ref|YP_360607.1| 30S ribosomal protein S2 [Carboxydothermus hydrogenoformans Z-2901] gi|123770565|sp|Q3AB77|RS2_CARHZ RecName: Full=30S ribosomal protein S2 gi|77994887|gb|ABB13786.1| ribosomal protein S2 [Carboxydothermus hydrogenoformans Z-2901] Length = 232 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T L++A + + A+ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIFTDRNGIYIIDLQKTAKKLEEAYSFVRELSAQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ + +++L ++E++ Sbjct: 64 GGTILFVGTKKQAQDAIKEEAERCGMFYVNQRWLGGTLTNFKTIRKRVERLIEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE I ++++KL R L GI++M LPD +FVVD +EK+A+ EAR+L Sbjct: 121 EQEGALSVLPKKEVAKILKEKEKLSRFLSGIKEMKKLPDALFVVDPRKEKIAVAEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|171059531|ref|YP_001791880.1| 30S ribosomal protein S2 [Leptothrix cholodnii SP-6] gi|238689084|sp|B1XXJ5|RS2_LEPCP RecName: Full=30S ribosomal protein S2 gi|170776976|gb|ACB35115.1| ribosomal protein S2 [Leptothrix cholodnii SP-6] Length = 248 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 150/222 (67%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R++LE+GV FGH+ WNPKM YIF RN HII+L +TVP+ +A + + Sbjct: 3 FTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTVPLFNEATKYARQLAGK 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA D V A R+ V ++WLGGM+TN+KTV S++KL++++ + Sbjct: 63 RGTILFVGTKRQARDVVAMEAARAGMPFVETRWLGGMLTNFKTVKGSLKKLKEMQAQVEA 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q KKE L +R+ KL++ + GI+DM LPD +FV+D K+AI EA++L IP++ Sbjct: 123 GTQPAIKKEALMFQREIAKLEKDIGGIQDMNALPDALFVIDVGFHKIAIAEAKKLGIPVI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P +DYVIPGNDDS++++AL+ ++A A I+G A Sbjct: 183 GVVDTNHSPVGIDYVIPGNDDSAKAVALYARVMADAIIEGKA 224 >gi|292670553|ref|ZP_06603979.1| 30S ribosomal protein S2 [Selenomonas noxia ATCC 43541] gi|292647719|gb|EFF65691.1| 30S ribosomal protein S2 [Selenomonas noxia ATCC 43541] Length = 248 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/245 (45%), Positives = 161/245 (65%), Gaps = 10/245 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 ++ +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 11 FSMAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLR 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 G +LF+ TK QA + + E A R+ + VN +WLGGMMTN++T+ + I +L+ LE Sbjct: 71 SVAQEGKSVLFIGTKKQAQEAIREEALRANMFYVNERWLGGMMTNFQTIQRRIHRLKTLE 130 Query: 121 ELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E+ +EN F TKKE + +++KL+R L GI+DM LP +FVVD +E++A+ EA Sbjct: 131 EM--EENGTFDLLTKKEVQGLRHEKEKLERYLGGIKDMNRLPGALFVVDPRKERIAVAEA 188 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R+L IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G S GA Sbjct: 189 RKLNIPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEG-----SQGGASE 243 Query: 238 KSAGE 242 ++A E Sbjct: 244 EAAAE 248 >gi|326693029|ref|ZP_08230034.1| 30S ribosomal protein S2 [Leuconostoc argentinum KCTC 3773] Length = 258 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/229 (46%), Positives = 156/229 (68%), Gaps = 5/229 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE+GV FGH+ W+PKM+ +IF ERN HIIDL +TV ++ +A + + A Sbjct: 4 ISMKELLEAGVHFGHQTRRWDPKMDEFIFTERNGIHIIDLQKTVKLVDEAYNFMRNASAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 64 GATFLFVGTKKQASDAIAEEATRAGQYYINHRWLGGTLTNWNTIKTRIQRLKDLEAM--A 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L I Sbjct: 122 EDGTFDQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 P+VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S Sbjct: 182 PVVAMIDTNANPEVVDVKIPANDDAIRAVRLITSKMADAIIEGRQGQDS 230 >gi|310828086|ref|YP_003960443.1| hypothetical protein ELI_2498 [Eubacterium limosum KIST612] gi|308739820|gb|ADO37480.1| hypothetical protein ELI_2498 [Eubacterium limosum KIST612] Length = 259 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 155/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV + A + + A G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVKKIDVACNFVKEVAANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + AKRS +CVN +WLGG +TN+ T+S+ I++L++L+ + +E Sbjct: 65 ESILFVGTKKQAQTSIEKEAKRSGSFCVNHRWLGGTLTNFTTISKRIERLKELKAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++R+R+KL++ L GI DM +P M V+D+ +E++AI EA +L IP Sbjct: 123 DGTFELLPKKEVIKLKREREKLQKFLGGIEDMKEMPGAMIVIDSKKERIAIAEAHKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IV++VDTN +PD +DYVIPGNDD+ R++AL ++A A I+G Sbjct: 183 IVSIVDTNCDPDEIDYVIPGNDDAIRAVALILGVLADAIIEG 224 >gi|73541570|ref|YP_296090.1| 30S ribosomal protein S2 [Ralstonia eutropha JMP134] gi|123774077|sp|Q470D7|RS2_RALEJ RecName: Full=30S ribosomal protein S2 gi|72118983|gb|AAZ61246.1| SSU ribosomal protein S2P [Ralstonia eutropha JMP134] Length = 247 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 155/224 (69%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q AL+ + A Sbjct: 4 TMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G I+FV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTIMFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAA--KE 121 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L ER+ KL++++ GI++MGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALDTMSKKEALMFEREMIKLEKSIGGIKEMGGIPDAIFVVDVGYHKIAVTEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|254448771|ref|ZP_05062228.1| ribosomal protein S2 [gamma proteobacterium HTCC5015] gi|198261612|gb|EDY85900.1| ribosomal protein S2 [gamma proteobacterium HTCC5015] Length = 307 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 117/255 (45%), Positives = 168/255 (65%), Gaps = 6/255 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ WNPKM +YIF ERN HII+L +T+P+ A+ +S Sbjct: 1 MAKVTMRQMLEAGVHFGHQTRFWNPKMGQYIFGERNKIHIINLEKTMPLFDDAMNYLSKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK A D V E A+R+ V+ +WLGGM+TN+ TV +SI++L+D+EE Sbjct: 61 ASQNGKILFVGTKRAARDIVREEAQRAGMPYVDQRWLGGMLTNFPTVKKSIRRLKDIEEQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + + KKE L + R+ DKL+R+L GIRDM LPD +F+VD EK+A+ EA +L Sbjct: 121 LKDGTAEHLNKKETLLMTREADKLERSLGGIRDMERLPDCLFIVDNGYEKIAVNEAVKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V+VVDTN+ +DY IPGNDD+ R+I L+ A A ++G RQ + + T G Sbjct: 181 IPVVSVVDTNNPLVNIDYPIPGNDDAIRAIKLYVSAAADAVLEG--RQSAQIA--TPDKG 236 Query: 242 ETVVH-SKEGMQLEE 255 + V S+E EE Sbjct: 237 DDFVEVSEEAAPAEE 251 >gi|14278531|pdb|1I94|B Chain B, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 gi|14278552|pdb|1I95|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine gi|14278573|pdb|1I96|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) gi|14278595|pdb|1I97|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Tetracycline gi|226887630|pdb|2ZM6|B Chain B, Crystal Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Length = 255 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/244 (45%), Positives = 158/244 (64%), Gaps = 5/244 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D Sbjct: 3 EITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAM 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 RGG ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L Sbjct: 63 RGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFA 122 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + E + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP Sbjct: 123 SPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALF----CDLVASAAIDGIARQHSYMGADTKS 239 ++A+ DT+S+PDLVDY+IPGNDD+ RSI L DL+ A + SY Sbjct: 183 VIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQEAE 242 Query: 240 AGET 243 A ET Sbjct: 243 ATET 246 >gi|194289792|ref|YP_002005699.1| 30S ribosomal protein s2 [Cupriavidus taiwanensis LMG 19424] gi|229470512|sp|B3R2B7|RS2_CUPTR RecName: Full=30S ribosomal protein S2 gi|193223627|emb|CAQ69634.1| 30S ribosomal subunit protein S2 [Cupriavidus taiwanensis LMG 19424] Length = 247 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 156/224 (69%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q A++ + A Sbjct: 4 TMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E KE Sbjct: 64 GTILFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAA--KE 121 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ KL++++ GI++MGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALETMSKKEALMFEREMIKLEKSIGGIKEMGGVPDAIFVVDVGYHKIAVTEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRA 225 >gi|154249917|ref|YP_001410742.1| 30S ribosomal protein S2 [Fervidobacterium nodosum Rt17-B1] gi|171769413|sp|A7HMF2|RS2_FERNB RecName: Full=30S ribosomal protein S2 gi|154153853|gb|ABS61085.1| ribosomal protein S2 [Fervidobacterium nodosum Rt17-B1] Length = 259 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGHR WNPKM+ YI+ R +IIDL +TV ++ +A + D Sbjct: 1 MPVVTMKQLLEAGVHFGHRTQRWNPKMKPYIYGARKGIYIIDLQKTVKLIDEAYDFVRDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++GG ILFV TK QA V A+R + VN++WLGG++TN++T+ IQ+L +LEE+ Sbjct: 61 ASKGGTILFVGTKKQAQQVVKNEAERCGGFYVNNRWLGGLLTNFQTIQSRIQRLIELEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E KKE+ + + +KL++ L G+++M GLPD++FVVD +EK+A++EA L Sbjct: 121 EANGELDKLPKKEQSKLRKTLEKLRKNLGGLKNMRGLPDVIFVVDPRKEKIAVEEANYLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIP NDD+ R+IAL +A A ++G Sbjct: 181 IPIVAMVDTNCDPDPIDYVIPSNDDAIRAIALIASKIADAYLEG 224 >gi|148652370|ref|YP_001279463.1| 30S ribosomal protein S2 [Psychrobacter sp. PRwf-1] gi|148571454|gb|ABQ93513.1| SSU ribosomal protein S2P [Psychrobacter sp. PRwf-1] Length = 284 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 150/221 (67%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A+ Sbjct: 32 MRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKNN 91 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK AS + E A R+ Q V+ +WLGGM+TNWKT+ QSI +L++LE+ E+ Sbjct: 92 KVLFVGTKRAASGVIREQALRAGQPYVDHRWLGGMLTNWKTLRQSINRLKELEK--QAED 149 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TK+E L R +KL+R+L GI++MGGLPD +FVVD + E +AI+EA+ L IP+ Sbjct: 150 GTFAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPV 209 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I G Sbjct: 210 IGIVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAG 250 >gi|107103170|ref|ZP_01367088.1| hypothetical protein PaerPA_01004239 [Pseudomonas aeruginosa PACS2] Length = 246 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/235 (47%), Positives = 157/235 (66%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNP+M ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPEMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD 233 >gi|296132867|ref|YP_003640114.1| ribosomal protein S2 [Thermincola sp. JR] gi|296031445|gb|ADG82213.1| ribosomal protein S2 [Thermincola potens JR] Length = 239 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 157/221 (71%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF +RN +IIDL +TV M++ A + I +TVA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAQYIFTDRNGIYIIDLQKTVKMVEIAYEFIKNTVAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ILFV TK QA + V E A+R + VN +WLGGM+TN+ T+ + I +L++LE++ ++ Sbjct: 64 GKTILFVGTKKQAQEAVKEEAERCGMFYVNQRWLGGMLTNFHTIRKRINRLQELEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE ++ +++KL++ L GI+DM LP +FV+D +E++A+ EAR+L IPI Sbjct: 124 GTFEVLPKKEVAALQHEKEKLQKFLGGIKDMKELPGALFVIDPRKERIAVAEARKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 184 VAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAVLEG 224 >gi|330894592|gb|EGH27253.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. mori str. 301020] Length = 247 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/226 (49%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FVVD + E++AI EA + Sbjct: 119 VQSEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVVDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|30263831|ref|NP_846208.1| 30S ribosomal protein S2 [Bacillus anthracis str. Ames] gi|42782918|ref|NP_980165.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 10987] gi|47529255|ref|YP_020604.1| 30S ribosomal protein S2 [Bacillus anthracis str. 'Ames Ancestor'] gi|49186677|ref|YP_029929.1| 30S ribosomal protein S2 [Bacillus anthracis str. Sterne] gi|49478399|ref|YP_037888.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141661|ref|YP_085168.1| 30S ribosomal protein S2 [Bacillus cereus E33L] gi|118479049|ref|YP_896200.1| 30S ribosomal protein S2 [Bacillus thuringiensis str. Al Hakam] gi|217961247|ref|YP_002339815.1| 30S ribosomal protein S2 [Bacillus cereus AH187] gi|218904955|ref|YP_002452789.1| ribosomal protein S2 [Bacillus cereus AH820] gi|222097272|ref|YP_002531329.1| 30S ribosomal protein s2 [Bacillus cereus Q1] gi|225865808|ref|YP_002751186.1| 30S ribosomal protein S2 [Bacillus cereus 03BB102] gi|227813265|ref|YP_002813274.1| 30S ribosomal protein S2 [Bacillus anthracis str. CDC 684] gi|229140468|ref|ZP_04269023.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST26] gi|229603327|ref|YP_002868065.1| 30S ribosomal protein S2 [Bacillus anthracis str. A0248] gi|254683466|ref|ZP_05147326.1| 30S ribosomal protein S2 [Bacillus anthracis str. CNEVA-9066] gi|254721987|ref|ZP_05183776.1| 30S ribosomal protein S2 [Bacillus anthracis str. A1055] gi|254735865|ref|ZP_05193571.1| 30S ribosomal protein S2 [Bacillus anthracis str. Western North America USA6153] gi|254739609|ref|ZP_05197303.1| 30S ribosomal protein S2 [Bacillus anthracis str. Kruger B] gi|254756018|ref|ZP_05208049.1| 30S ribosomal protein S2 [Bacillus anthracis str. Vollum] gi|254759321|ref|ZP_05211346.1| 30S ribosomal protein S2 [Bacillus anthracis str. Australia 94] gi|38258302|sp|Q81WK8|RS2_BACAN RecName: Full=30S ribosomal protein S2 gi|47606710|sp|Q9XBK3|RS2_BACC1 RecName: Full=30S ribosomal protein S2 gi|61215458|sp|Q636J9|RS2_BACCZ RecName: Full=30S ribosomal protein S2 gi|61215552|sp|Q6HEY8|RS2_BACHK RecName: Full=30S ribosomal protein S2 gi|166225240|sp|A0RHK0|RS2_BACAH RecName: Full=30S ribosomal protein S2 gi|226732172|sp|B7JJA5|RS2_BACC0 RecName: Full=30S ribosomal protein S2 gi|226732174|sp|B7HLG0|RS2_BACC7 RecName: Full=30S ribosomal protein S2 gi|254764453|sp|C3P5M9|RS2_BACAA RecName: Full=30S ribosomal protein S2 gi|254764454|sp|C3L7A0|RS2_BACAC RecName: Full=30S ribosomal protein S2 gi|254764455|sp|C1EP51|RS2_BACC3 RecName: Full=30S ribosomal protein S2 gi|254764456|sp|B9IVB6|RS2_BACCQ RecName: Full=30S ribosomal protein S2 gi|30258475|gb|AAP27694.1| 30S ribosomal protein S2 [Bacillus anthracis str. Ames] gi|42738845|gb|AAS42773.1| ribosomal protein S2 [Bacillus cereus ATCC 10987] gi|47504403|gb|AAT33079.1| ribosomal protein S2 [Bacillus anthracis str. 'Ames Ancestor'] gi|49180604|gb|AAT55980.1| ribosomal protein S2 [Bacillus anthracis str. Sterne] gi|49329955|gb|AAT60601.1| ribosomal protein S2 (30S ribosomal protein S2) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51975130|gb|AAU16680.1| ribosomal protein S2 (30S ribosomal protein S2) [Bacillus cereus E33L] gi|118418274|gb|ABK86693.1| SSU ribosomal protein S2P [Bacillus thuringiensis str. Al Hakam] gi|217062981|gb|ACJ77231.1| ribosomal protein S2 [Bacillus cereus AH187] gi|218537106|gb|ACK89504.1| ribosomal protein S2 [Bacillus cereus AH820] gi|221241330|gb|ACM14040.1| ribosomal protein S2 (30S ribosomal protein S2) [Bacillus cereus Q1] gi|225789396|gb|ACO29613.1| 30S ribosomal protein S2 [Bacillus cereus 03BB102] gi|227006482|gb|ACP16225.1| 30S ribosomal protein S2 [Bacillus anthracis str. CDC 684] gi|228643029|gb|EEK99305.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST26] gi|229267735|gb|ACQ49372.1| 30S ribosomal protein S2 [Bacillus anthracis str. A0248] gi|324327724|gb|ADY22984.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 233 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 158/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A +V+ D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 64 GGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|209573707|sp|B1MZ65|RS2_LEUCK RecName: Full=30S ribosomal protein S2 Length = 258 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 104/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A + + Sbjct: 4 ISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFMRNASTD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 64 GANFLFVGTKKQASDAIAEEAARAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEAMAED 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L IP+ Sbjct: 124 GTFEQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLNIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S Sbjct: 184 VAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDS 230 >gi|3417446|dbj|BAA32342.1| ribosomal protein S2 [Pseudomonas aeruginosa] Length = 280 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 109/222 (49%), Positives = 151/222 (68%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + A Sbjct: 3 QVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERLAA 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 63 GKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQSQ 122 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L IP Sbjct: 123 DGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G Sbjct: 183 VIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG 224 >gi|39997019|ref|NP_952970.1| 30S ribosomal protein S2 [Geobacter sulfurreducens PCA] gi|61215648|sp|Q74BW1|RS2_GEOSL RecName: Full=30S ribosomal protein S2 gi|39983907|gb|AAR35297.1| ribosomal protein S2 [Geobacter sulfurreducens PCA] gi|298506036|gb|ADI84759.1| ribosomal protein S2 [Geobacter sulfurreducens KN400] Length = 251 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 151/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + + Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYNFVREN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A R Y VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQAGETMLFVGTKKQAQDAIGEEAVRCGMYFVNQRWLGGMLTNFVTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +TKKE L +E++R+KL++ L GI+ MG LP +FV+D E +AI EA++L Sbjct: 121 FADGSIEAYTKKEALQLEKEREKLEKILGGIKGMGKLPGALFVIDPKNETIAISEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VAVVDTN +PD +DYVIPGNDD+ R+I L +A A I+G Sbjct: 181 IPVVAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVIEG 224 >gi|61215756|sp|Q83G71|RS2_TROWT RecName: Full=30S ribosomal protein S2 gi|61215757|sp|Q83HZ7|RS2_TROW8 RecName: Full=30S ribosomal protein S2 gi|28410605|emb|CAD66991.1| 30s ribosomal protein S2 [Tropheryma whipplei TW08/27] Length = 287 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP TIR LL++GV FGH WNPKM+ +I ER ++I+D+ +T+ + A+ I D Sbjct: 6 GLPLVTIRNLLDNGVHFGHTTQRWNPKMKGFILTERCGSYILDMRETIRGIVTAVDFIRD 65 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVARGG +LF+ TK QA + + A R Q+ + +WLGG++TN+ TVS+S+ ++++LEE Sbjct: 66 TVARGGEVLFIGTKRQAQQVIFKQASRVGQHYIAHRWLGGLLTNFSTVSKSLVRMKELEE 125 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE+L R+ KL+R+L GIR+M LP L++VVDTNRE +A++EAR+L Sbjct: 126 -ARLDDSVSTKKEQLIRGRELQKLRRSLGGIRNMTKLPALLWVVDTNREGIAVEEARKLG 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++D+N +PDLV + IPGNDDS RSI L +VA A G+ +H D + Sbjct: 185 IPVVAILDSNCDPDLVQFPIPGNDDSIRSIELLTGIVADAVAQGLVERHKAPQDDIEPMA 244 Query: 242 E 242 E Sbjct: 245 E 245 >gi|309751420|gb|ADO81404.1| 30S ribosomal protein S2 [Haemophilus influenzae R2866] Length = 251 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 12 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 72 ASNNGKVLFVGTKRAASEAVQVAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 132 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G Sbjct: 192 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 235 >gi|170017342|ref|YP_001728261.1| ribosomal protein S2 [Leuconostoc citreum KM20] gi|169804199|gb|ACA82817.1| Ribosomal protein S2 [Leuconostoc citreum KM20] Length = 273 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 104/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A + + Sbjct: 19 ISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFMRNASTD 78 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 79 GANFLFVGTKKQASDAIAEEAARAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEAMAED 138 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L IP+ Sbjct: 139 GTFEQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLNIPV 198 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S Sbjct: 199 VAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDS 245 >gi|148265753|ref|YP_001232459.1| 30S ribosomal protein S2 [Geobacter uraniireducens Rf4] gi|189044940|sp|A5G7W8|RS2_GEOUR RecName: Full=30S ribosomal protein S2 gi|146399253|gb|ABQ27886.1| SSU ribosomal protein S2P [Geobacter uraniireducens Rf4] Length = 256 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/236 (45%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKGAYNFVVDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R + VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQSGETMLFVGTKKQAQDSVSEEAQRCGMFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE L +E+ R KL++ L GI+ M LP ++FV+D E++A+ EA++L Sbjct: 121 VADGTIEAYTKKEALQMEKDRQKLEKTLGGIKGMNKLPGVLFVIDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+VA+VDTN +PD +DYVIPGNDD+ R+I L VA A I+G ++ + DT Sbjct: 181 IPVVAIVDTNCDPDDIDYVIPGNDDAIRAIRLLTSKVADAMIEGGQARNIKLQTDT 236 >gi|319957320|ref|YP_004168583.1| SSU ribosomal protein s2p [Nitratifractor salsuginis DSM 16511] gi|319419724|gb|ADV46834.1| SSU ribosomal protein S2P [Nitratifractor salsuginis DSM 16511] Length = 286 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 151/220 (68%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+++IF ER N +IIDL +T+ + V+ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKFIFGERKNIYIIDLQKTLRYFKYTYNVVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA V E A+R+ V ++WLGGM+TN+ T+ +SI+KL +E++ N Sbjct: 63 KTVLFVGTKKQARSAVKEHAERAGMPYVATRWLGGMLTNYPTIKKSIRKLEIIEQMEENG 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L + RK++KL L+G R M LPD+MFV+D +E +A++EARR+ +P++ Sbjct: 123 QINLLTKKEALMLRRKKEKLLNYLEGYRHMKKLPDMMFVIDAVKEHIAVKEARRMGMPVI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A +DTN +PDL+DY IPGNDD+ RSI LFC +A A I+G Sbjct: 183 APLDTNCDPDLIDYPIPGNDDAIRSINLFCREIADAIIEG 222 >gi|229588803|ref|YP_002870922.1| 30S ribosomal protein S2 [Pseudomonas fluorescens SBW25] gi|259495221|sp|C3K5E6|RS2_PSEFS RecName: Full=30S ribosomal protein S2 gi|229360669|emb|CAY47527.1| 30S ribosomal protein S2 [Pseudomonas fluorescens SBW25] Length = 245 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 113/237 (47%), Positives = 154/237 (64%), Gaps = 7/237 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G R H G + Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG--RNHVAGGTE 233 >gi|261491689|ref|ZP_05988270.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494452|ref|ZP_05990938.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309836|gb|EEY11053.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312642|gb|EEY13764.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 239 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAASEAVKLAAVDSQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D +A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEG 224 >gi|213964691|ref|ZP_03392891.1| ribosomal protein S2 [Corynebacterium amycolatum SK46] gi|213952884|gb|EEB64266.1| ribosomal protein S2 [Corynebacterium amycolatum SK46] Length = 281 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 158/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LL++GV FGH+ WNPKM+R+IF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 13 SMRELLDAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLTYIDEAFEFVKETVAHG 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R VN +WLGGM+TN+ TVS+ + +L++L+ + E Sbjct: 73 GNILFVGTKKQAQEAVQNEAERVDMPYVNHRWLGGMLTNFATVSKRLARLKELQAMDAAE 132 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N +G KKE L + R+R KL+R L GIRDM +P +++VDTN+E +A+ EA++L IP+ Sbjct: 133 NGYEGRGKKEILMLTRERTKLERTLGGIRDMSKVPSALWIVDTNKEHIAVAEAKKLGIPV 192 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD VD+ IPGNDD+ R+ ++ ++++A +G Sbjct: 193 VAILDTNCDPDDVDFPIPGNDDAIRAASVLTRIISTAVEEG 233 >gi|301062044|ref|ZP_07202752.1| ribosomal protein S2 [delta proteobacterium NaphS2] gi|300443852|gb|EFK07909.1| ribosomal protein S2 [delta proteobacterium NaphS2] Length = 288 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 178/276 (64%), Gaps = 11/276 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++QLLE+GV FGH+ WNPKM+ YIF RN HIIDL +TV + + A + TVA Sbjct: 4 INMKQLLEAGVHFGHQTRRWNPKMKPYIFGARNGIHIIDLQKTVRLFKTAYDFVVKTVAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK Q D V+E ++R + + ++WLGG +TN++T+ QSI++L+DLE++ K Sbjct: 64 GYPVLFVGTKKQGHDAVIEESERCGMFFMVNRWLGGTLTNFQTIKQSIKRLKDLEKM--K 121 Query: 126 ENQG---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ +TKKE L +E++ KL++ L GI++M LP +FV+D REK+A++EAR+L I Sbjct: 122 EDGSIARYTKKEVLQMEKELSKLEKNLGGIKNMDELPGAVFVIDPKREKIAVKEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA+ D+N +PD +D +IPGNDD+ R+I L +A A I+G A + A+ + E Sbjct: 182 PVVAIADSNCDPDDIDLIIPGNDDAIRAIRLITSKIADACIEGHAIAEQRLRAEDAAKKE 241 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 KE +EE ++S + G EV ++P+ S Sbjct: 242 -----KEAASVEEKPEAS-AGEDGGPEVIILPKTES 271 >gi|145638266|ref|ZP_01793876.1| 30S ribosomal protein S2 [Haemophilus influenzae PittII] gi|145272595|gb|EDK12502.1| 30S ribosomal protein S2 [Haemophilus influenzae PittII] Length = 240 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAASEAVQVAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 224 >gi|295396954|ref|ZP_06807076.1| 30S ribosomal protein S2 [Aerococcus viridans ATCC 11563] gi|294974807|gb|EFG50512.1| 30S ribosomal protein S2 [Aerococcus viridans ATCC 11563] Length = 257 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 156/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ +A + D Sbjct: 6 MPVISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKLVDQAYNAMRDL 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G LFV TK QA D + + A R+ QY VN +WLGG +TNW+T+ + I+ L++++E+ Sbjct: 66 VGNDGIALFVGTKKQAQDSIADEATRAGQYYVNHRWLGGTLTNWETIQKRIKHLKNIKEM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ KKE + + +++++L++ L GI DM +PD+MFVVD +EK+AIQEA +L Sbjct: 126 EVDGTFDVLPKKEVVGLLKEKERLEKFLGGIEDMPRIPDVMFVVDPRKEKIAIQEAHKLN 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A+VDTN +PD VDYVIP NDD+ R+I L +A A ++ Sbjct: 186 IPVIAMVDTNCDPDEVDYVIPSNDDAIRAIKLITGGMAEAILEA 229 >gi|152991279|ref|YP_001357001.1| 30S ribosomal protein S2 [Nitratiruptor sp. SB155-2] gi|166225288|sp|A6Q585|RS2_NITSB RecName: Full=30S ribosomal protein S2 gi|151423140|dbj|BAF70644.1| 30S ribosomal protein S2 [Nitratiruptor sp. SB155-2] Length = 267 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/223 (49%), Positives = 149/223 (66%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+ +IF R N HIIDL +T+ + ++ D G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKPFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAKEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E AK+ VNS+WLGG +TN+ T+ +SI+KL +EE+ E Sbjct: 63 KTILFVGTKKQAKNAIEEYAKKCGMPYVNSRWLGGTLTNFNTIKKSIRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL+ L GIRDM GLPD++F++D RE +A++E +L I Sbjct: 120 KTGQMDLLTKKEALMLRRKKEKLENFLGGIRDMKGLPDMLFIIDAVREHIAVKEGNKLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDL+DY IPGNDD+ RSI LFC +A A I+G Sbjct: 180 PIVAPLDTNCDPDLIDYPIPGNDDAIRSIQLFCKEMAEAIIEG 222 >gi|331003451|ref|ZP_08326950.1| 30S ribosomal protein S2 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412497|gb|EGG91886.1| 30S ribosomal protein S2 [Lachnospiraceae oral taxon 107 str. F0167] Length = 258 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 112/254 (44%), Positives = 162/254 (63%), Gaps = 12/254 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL Q+V M+ A +SD Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQQSVGMVDTAYNAMSDIAKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + E A+R Y VN +WLGGM+TN+KT+ I++LR LEE+ Sbjct: 64 GGKILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLRQLEEM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI+DM +PD +F++D +E++ +QEA L I Sbjct: 122 EDGTFDLLPKKEVIQLKKEWEKLEKNLGGIKDMKDVPDAIFIIDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-----ADT 237 P++ + DTN +PD +DY+IPGNDD+ R++ L +A A I+ A Q + AD Sbjct: 182 PLIGICDTNCDPDELDYLIPGNDDAIRAVKLIVAKMADAVIE--ANQGEILSTSEDVADD 239 Query: 238 KSAGETVVHSKEGM 251 GET KE + Sbjct: 240 ALEGETFAPEKEAL 253 >gi|71737096|ref|YP_275978.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487084|ref|ZP_05641125.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626035|ref|ZP_06458989.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651448|ref|ZP_06482791.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str. 2250] gi|298488332|ref|ZP_07006364.1| SSU ribosomal protein S2p (SAe) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123761192|sp|Q48F59|RS2_PSE14 RecName: Full=30S ribosomal protein S2 gi|71557649|gb|AAZ36860.1| ribosomal protein S2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157154|gb|EFH98242.1| SSU ribosomal protein S2p (SAe) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323120|gb|EFW79209.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str. B076] gi|320329608|gb|EFW85597.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867583|gb|EGH02292.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330878190|gb|EGH12339.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str. race 4] gi|331009281|gb|EGH89337.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 247 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQSEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|311068171|ref|YP_003973094.1| 30S ribosomal protein S2 [Bacillus atrophaeus 1942] gi|310868688|gb|ADP32163.1| 30S ribosomal protein S2 [Bacillus atrophaeus 1942] Length = 243 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNLAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D V E A RS Y VN +WLGG +TN++T+ + I++L+D+E++ + Sbjct: 64 GGKILFVGTKKQAQDSVKEEAGRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + ++++ ++L++ L GI+DM GLPD +F++D +E++A+ EAR+L I Sbjct: 122 ENGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|255323536|ref|ZP_05364667.1| ribosomal protein S2 [Campylobacter showae RM3277] gi|255299573|gb|EET78859.1| ribosomal protein S2 [Campylobacter showae RM3277] Length = 266 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 109/223 (48%), Positives = 152/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + V+ D A G Sbjct: 3 TMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNVVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + E Sbjct: 63 KTILFVGTKKQAGATLKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEAM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL +L GIR++ +PD++FV+DT +EK+A+QEA RL+I Sbjct: 120 EDGSINLLTKKEALMLRRKKEKLLASLGGIRNLKTVPDMIFVIDTVKEKIAVQEANRLKI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA +DTN +PD++D+ IPGNDD+ RS+ LFC +A A I+G Sbjct: 180 PVVAPIDTNCDPDVIDFPIPGNDDAIRSVQLFCQEMAEAIIEG 222 >gi|228916464|ref|ZP_04080030.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928875|ref|ZP_04091907.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935141|ref|ZP_04097968.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947546|ref|ZP_04109836.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228986970|ref|ZP_04147096.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229092867|ref|ZP_04224001.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-42] gi|229123340|ref|ZP_04252544.1| 30S ribosomal protein S2 [Bacillus cereus 95/8201] gi|229157403|ref|ZP_04285481.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 4342] gi|229186066|ref|ZP_04313236.1| 30S ribosomal protein S2 [Bacillus cereus BGSC 6E1] gi|229197937|ref|ZP_04324653.1| 30S ribosomal protein S2 [Bacillus cereus m1293] gi|228585655|gb|EEK43757.1| 30S ribosomal protein S2 [Bacillus cereus m1293] gi|228597485|gb|EEK55135.1| 30S ribosomal protein S2 [Bacillus cereus BGSC 6E1] gi|228626130|gb|EEK82879.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 4342] gi|228660116|gb|EEL15752.1| 30S ribosomal protein S2 [Bacillus cereus 95/8201] gi|228690489|gb|EEL44272.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-42] gi|228772748|gb|EEM21188.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228812066|gb|EEM58397.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824506|gb|EEM70311.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830682|gb|EEM76287.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843043|gb|EEM88125.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 228 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 157/221 (71%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A +V+ D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + +E+ Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--QED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI Sbjct: 119 GTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 179 IGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 219 >gi|28868740|ref|NP_791359.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato str. DC3000] gi|213969118|ref|ZP_03397257.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato T1] gi|301383987|ref|ZP_07232405.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato Max13] gi|302061959|ref|ZP_07253500.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato K40] gi|302134054|ref|ZP_07260044.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38258313|sp|Q886P3|RS2_PSESM RecName: Full=30S ribosomal protein S2 gi|28851979|gb|AAO55054.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato str. DC3000] gi|213926116|gb|EEB59672.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato T1] gi|330872739|gb|EGH06888.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016367|gb|EGH96423.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 247 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|291278484|ref|YP_003495319.1| 30S ribosomal protein S2 [Deferribacter desulfuricans SSM1] gi|290753186|dbj|BAI79563.1| 30S ribosomal protein S2 [Deferribacter desulfuricans SSM1] Length = 269 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I+ LLE+GV FGH+ WNPKM++Y+F ++N +IIDL +TV +A + I D V G Sbjct: 5 SIKNLLEAGVHFGHQTKRWNPKMQKYVFGKKNGIYIIDLQKTVQCFNQAYEFIRDMVKGG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA + + EAA++ + VN++WLGG +TN+ T+ IQ+L++LEE+ N + Sbjct: 65 ASVLFVGTKKQAQEAIKEAAEKCQSFYVNNRWLGGTLTNFNTIKTRIQRLKELEEMFNSD 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +TKKE ++R+ +KLK+ L GI+DM +PD++F++D RE A+ EAR+L +PIV Sbjct: 125 YIKNYTKKEAARLKREYEKLKKNLYGIKDMQEIPDILFIIDIKREMNAVLEARKLGLPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTN +PDLVD+ IPGNDD+ R+ L +A A ++G Sbjct: 185 AIVDTNCDPDLVDFPIPGNDDAIRACQLIAGRIADAVLEG 224 >gi|255327234|ref|ZP_05368308.1| ribosomal protein S2 [Rothia mucilaginosa ATCC 25296] gi|283458523|ref|YP_003363151.1| 30S ribosomal protein S2 [Rothia mucilaginosa DY-18] gi|255295514|gb|EET74857.1| ribosomal protein S2 [Rothia mucilaginosa ATCC 25296] gi|283134566|dbj|BAI65331.1| ribosomal protein S2 [Rothia mucilaginosa DY-18] Length = 265 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 105/231 (45%), Positives = 162/231 (70%), Gaps = 2/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R++L+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + KA + + T Sbjct: 1 MPVVTMREMLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSLAFIDKAYEAVKST 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ T+S+SI+++++LE++ Sbjct: 61 VAHGGNILFVGTKKQAQEVIAEQATRVNMPYVNHRWLGGMLTNFSTISKSIERMKELEQI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+ +KL++ L GIR++ +P L++VVDT +E LA+ EA++L Sbjct: 121 DFDDVAGSRYTKKELLLMRREFEKLEKTLGGIRNLSKVPSLLWVVDTKKEHLAVNEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+VA++DTN +PD V + IPGNDD+ RS+ L ++A A G+ +++ Sbjct: 181 GIPVVAILDTNCDPDEVAFPIPGNDDAIRSVNLLTRVIADAVAAGLIERNA 231 >gi|28476457|gb|AAO44546.1| 30S ribosomal protein S2 [Tropheryma whipplei str. Twist] Length = 308 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 116/268 (43%), Positives = 171/268 (63%), Gaps = 6/268 (2%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP TIR LL++GV FGH WNPKM+ +I ER ++I+D+ +T+ + A+ I D Sbjct: 27 GLPLVTIRNLLDNGVHFGHTTQRWNPKMKGFILTERCGSYILDMRETIRGIVTAVDFIRD 86 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVARGG +LF+ TK QA + + A R Q+ + +WLGG++TN+ TVS+S+ ++++LEE Sbjct: 87 TVARGGEVLFIGTKRQAQQVIFKQASRVGQHYIAHRWLGGLLTNFSTVSKSLVRMKELEE 146 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE+L R+ KL+R+L GIR+M LP L++VVDTNRE +A++EAR+L Sbjct: 147 -ARLDDSVSTKKEQLIRGRELQKLRRSLGGIRNMTKLPALLWVVDTNREGIAVEEARKLG 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++D+N +PDLV + IPGNDDS RSI L +VA A G+ +H D + Sbjct: 206 IPVVAILDSNCDPDLVQFPIPGNDDSIRSIELLTGIVADAVAQGLVERHKAPQDDIEPMA 265 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 E E L+ S E+ + G + Sbjct: 266 EW-----EKQLLQSGDSSGETRPISGTD 288 >gi|116492643|ref|YP_804378.1| SSU ribosomal protein S2P [Pediococcus pentosaceus ATCC 25745] gi|122265893|sp|Q03FT6|RS2_PEDPA RecName: Full=30S ribosomal protein S2 gi|116102793|gb|ABJ67936.1| SSU ribosomal protein S2P [Pediococcus pentosaceus ATCC 25745] Length = 260 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 115/259 (44%), Positives = 168/259 (64%), Gaps = 11/259 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV ++ A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDVAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + E AKR+ QY VN +WLGG +TNW T+ + I++L+DL+ + + Sbjct: 64 DGVVLFVGTKKQAQTAIEEEAKRAGQYFVNHRWLGGTLTNWNTIQKRIKRLKDLKAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + +++DKL++ L GI DM PD++FVVD +E++AI+EA++L I Sbjct: 122 EDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHTPDVLFVVDPRKEQIAIKEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA+VDTNS+PD VD +IP NDD+ R++ L +A A I+G RQ G D + A + Sbjct: 182 PVVAMVDTNSDPDQVDVIIPSNDDAIRAVRLITAKMADAVIEG--RQ----GEDEEEASQ 235 Query: 243 TVVHSKEGMQLEEDSQSSE 261 V LE+ +S E Sbjct: 236 EVAEGVSKDSLEDLKKSVE 254 >gi|116749213|ref|YP_845900.1| 30S ribosomal protein S2 [Syntrophobacter fumaroxidans MPOB] gi|166226763|sp|A0LJ63|RS2_SYNFM RecName: Full=30S ribosomal protein S2 gi|116698277|gb|ABK17465.1| SSU ribosomal protein S2P [Syntrophobacter fumaroxidans MPOB] Length = 274 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 113/251 (45%), Positives = 159/251 (63%), Gaps = 10/251 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A Q ++ TV Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKTYIFGARNGIYIIDLQRTVRLFHTAYQFVTQTVGS 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A+R Y +N +WLGGM+TN+KT+ + +L++L+ ++ Sbjct: 64 GEHVLFVGTKQQARDTIAEEAQRCGMYYINQRWLGGMLTNFKTIKLRVDRLKELDAMVED 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + F KKE L + +R+KL++ L GI++M LP ++VVDT RE +A+ EA RL IP+ Sbjct: 124 GSINRFPKKEILQLMGEREKLEKNLGGIKNMARLPGALYVVDTQRENIAVLEANRLGIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN +PDL++Y IPGNDD+ R+I L VA A +G R AD Sbjct: 184 VAIVDTNCDPDLINYPIPGNDDAIRAIRLITSKVADACAEGRRRLEETEQAD-------- 235 Query: 245 VHSKEGMQLEE 255 H KE LEE Sbjct: 236 -HDKEFTALEE 245 >gi|292492488|ref|YP_003527927.1| ribosomal protein S2 [Nitrosococcus halophilus Nc4] gi|291581083|gb|ADE15540.1| ribosomal protein S2 [Nitrosococcus halophilus Nc4] Length = 269 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 153/223 (68%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM YIF +RNN HII+L +T+P+ +A + Sbjct: 1 MANVTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYNEATNFLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK A + + E A+R VN +WLGGM+TN++TV +SI++L DLE + Sbjct: 61 AANKGTVLFVGTKRAAQEAIHEEAERCGMPYVNRRWLGGMLTNFQTVRRSIKRLHDLEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + K+E L + R+RDKL+ +L GI++M LPD +F++D E++A+ EA +L Sbjct: 121 IQDGSLERLKKREALTVRRERDKLENSLGGIKNMTHLPDALFIIDVEHERIAVDEAAKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP+VAVVDTNS+P VDY+IPGNDDS R++ L+ +A A ++ Sbjct: 181 IPVVAVVDTNSSPKKVDYIIPGNDDSIRALRLYARGIADAIVE 223 >gi|161486572|ref|NP_787577.2| 30S ribosomal protein S2 [Tropheryma whipplei str. Twist] gi|161501891|ref|NP_789253.2| 30S ribosomal protein S2 [Tropheryma whipplei TW08/27] Length = 281 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/240 (45%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P TIR LL++GV FGH WNPKM+ +I ER ++I+D+ +T+ + A+ I DT Sbjct: 1 MPLVTIRNLLDNGVHFGHTTQRWNPKMKGFILTERCGSYILDMRETIRGIVTAVDFIRDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG +LF+ TK QA + + A R Q+ + +WLGG++TN+ TVS+S+ ++++LEE Sbjct: 61 VARGGEVLFIGTKRQAQQVIFKQASRVGQHYIAHRWLGGLLTNFSTVSKSLVRMKELEE- 119 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ TKKE+L R+ KL+R+L GIR+M LP L++VVDTNRE +A++EAR+L I Sbjct: 120 ARLDDSVSTKKEQLIRGRELQKLRRSLGGIRNMTKLPALLWVVDTNREGIAVEEARKLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA++D+N +PDLV + IPGNDDS RSI L +VA A G+ +H D + E Sbjct: 180 PVVAILDSNCDPDLVQFPIPGNDDSIRSIELLTGIVADAVAQGLVERHKAPQDDIEPMAE 239 >gi|302339355|ref|YP_003804561.1| ribosomal protein S2 [Spirochaeta smaragdinae DSM 11293] gi|301636540|gb|ADK81967.1| ribosomal protein S2 [Spirochaeta smaragdinae DSM 11293] Length = 300 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 100/220 (45%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A ++ + V G Sbjct: 5 SMKSLLESGVHFGHQTKRWDPRMKKYIFAERNGIHIIDLQKTIVKIKEAYDMVREQVKEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 ILFV TK QA + AKR + VN++WLGGM+TN+ T+ +SI +L+ +E++ ++ Sbjct: 65 RSILFVGTKKQAQQAIESEAKRCGMFYVNNRWLGGMLTNFTTIKKSIHRLKKIEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE + ++R +L++ L GI++M LP +F++DT +E +A+ EARR+ IPI+ Sbjct: 125 TFESLTKKEIAKLNKERSRLEKNLGGIKEMKDLPGAIFIIDTRKESIAVAEARRMGIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN NPD+VD+ IPGNDD+ R+I LF +++ A ID Sbjct: 185 AVVDTNCNPDVVDFPIPGNDDAIRAITLFTKVISDAVIDA 224 >gi|197294564|ref|YP_001799105.1| 30S ribosomal protein S2 [Candidatus Phytoplasma australiense] gi|226697645|sp|B1VA80|RS2_PHYAS RecName: Full=30S ribosomal protein S2 gi|171853891|emb|CAM11853.1| 30S ribosomal protein S2 [Candidatus Phytoplasma australiense] Length = 260 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLESG FGH WNPKM++YIF RN HIID+ +T +++A Q +S V +G Sbjct: 5 TMKQLLESGTNFGHSTRKWNPKMKKYIFTSRNGIHIIDIKKTSEKIEEAYQELSKIVNQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LF+ TK Q +ME +KR QY VN +WLGG++TN+ T+ + IQ L DL + +E Sbjct: 65 GKVLFLGTKKQIQTSIMEESKRCGQYYVNHRWLGGILTNFHTILKRIQLLHDLHK---QE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + ++RKRDKL++ L GI+DM LP +FVVD +EK A+ EAR+L I Sbjct: 122 EDGVWKKLPKKEVVQLKRKRDKLEKFLGGIKDMKELPQALFVVDLEKEKNAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++VDTN +PDLVDY+IP NDD+ RS+ L ++A+A I+G Sbjct: 182 KVFSMVDTNCDPDLVDYIIPANDDAIRSVKLITWIIANACIEG 224 >gi|88706583|ref|ZP_01104286.1| 30S ribosomal protein S2 [Congregibacter litoralis KT71] gi|88699079|gb|EAQ96195.1| 30S ribosomal protein S2 [Congregibacter litoralis KT71] Length = 265 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/219 (49%), Positives = 150/219 (68%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM++YIF +RN HII+L TVP +AL ++ Sbjct: 1 MRDLLQAGAHFGHQTRYWNPKMDQYIFGDRNKIHIINLEYTVPAFNEALDMVKRLSGSKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK A + E A+R+ V+ +WLGGM+TN+KT+ SI++LR+LE + + Sbjct: 61 KILFVGTKRAAGKIMKEQAERAGMPYVSHRWLGGMLTNYKTIRASIKRLRELEAQQSDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+R++ GI+DMGGLPD +FVVD + E++AI EA +L IP++ Sbjct: 121 FAALTKKEALMRARQMEKLERSIGGIKDMGGLPDALFVVDVDHERIAITEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTNS+PD VDYVIPGNDD+ R+I L+ VA A I G Sbjct: 181 VVDTNSDPDGVDYVIPGNDDAIRAIKLYVTAVADACIAG 219 >gi|163783684|ref|ZP_02178671.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] gi|159881009|gb|EDP74526.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] Length = 269 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 114/270 (42%), Positives = 174/270 (64%), Gaps = 14/270 (5%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPKM Y++ +N HIIDL++T+ +L++A +SD+VA+G Sbjct: 1 MKELLEAGVHFGHSKSRWNPKMAPYLYGVKNGIHIIDLNRTLVLLEEAYNFVSDSVAQGA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 I+FV TK QA + + E A+R Y VN +W+GG++TN++TV +SIQKL LE + E Sbjct: 61 DIVFVGTKRQAKEIIREEAERCGAYYVNERWVGGLLTNFQTVRRSIQKLNKLERM---EA 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +G KKE + R+ +K+++ GIR+M LPDLM+VVDT RE +AIQEA++L IP Sbjct: 118 EGVFDVLPKKEVRRLRRQMEKMRKLYGGIREMTKLPDLMWVVDTIRESIAIQEAKKLGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA+ D+N +PD++DY+IPGNDD+ +SI L +A A +G R+ S + + + Sbjct: 178 VVAIADSNCDPDVIDYIIPGNDDAIKSIKLLTSKIADAVEEGRNRRESAEEVEARKERKV 237 Query: 244 VV---HSKE----GMQLEEDSQSSESSVLD 266 V H KE M + E + + ++D Sbjct: 238 VTVEEHEKELFEKAMAMSEKYEEIDKDMVD 267 >gi|312959392|ref|ZP_07773909.1| 30S ribosomal protein S2 [Pseudomonas fluorescens WH6] gi|311286109|gb|EFQ64673.1| 30S ribosomal protein S2 [Pseudomonas fluorescens WH6] Length = 245 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 113/237 (47%), Positives = 154/237 (64%), Gaps = 7/237 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G R H G + Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG--RNHVAGGTE 233 >gi|254496415|ref|ZP_05109295.1| 30S ribosomal protein S2 [Legionella drancourtii LLAP12] gi|254354362|gb|EET13017.1| 30S ribosomal protein S2 [Legionella drancourtii LLAP12] Length = 244 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 110/244 (45%), Positives = 156/244 (63%), Gaps = 9/244 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R+LLE+G FGHR WNP+M YIF RN HII+L +T+ ML + + + Sbjct: 1 MRELLEAGAHFGHRTRFWNPEMGEYIFGSRNKIHIINLEKTMVMLNDVVNYVGRLASNKA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 +ILFV TK A + + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ K Sbjct: 61 KILFVGTKRAAQESIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGL 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 G KKE L + R+ +KL R L GI MGGLPD +FVVD E +A++EARRL+IP++ Sbjct: 121 FDGMIKKEALMLTRELEKLDRGLGGIEHMGGLPDALFVVDVGFEHIAVEEARRLKIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--------GIARQHSYMGADTK 238 VVDTN++P+ +DYVIP NDDS R++ ++ +A A +D G++ G+D + Sbjct: 181 VVDTNNSPNNIDYVIPANDDSMRAVDIYVRCIADAILDAKNSNTVGGVSSSVEVQGSDAE 240 Query: 239 SAGE 242 AGE Sbjct: 241 KAGE 244 >gi|229086380|ref|ZP_04218556.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-44] gi|228696896|gb|EEL49705.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-44] Length = 233 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A V+ D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFNVMRDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 64 GGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L I Sbjct: 122 EDGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|330985108|gb|EGH83211.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 247 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQSEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMASMADAVIRG 224 >gi|319943826|ref|ZP_08018107.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599] gi|319743059|gb|EFV95465.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599] Length = 250 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQ+LE+GV FGH+ WNP+M YIF RN HII+L +T+ Q+A + + A G Sbjct: 4 TIRQMLEAGVHFGHQTRFWNPRMAPYIFGHRNKIHIINLEKTLVKYQEATRYLRQLAANG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK Q+ + + E A R+ V+ +WLGGM+TN+KTV SI++L+D+E+ + + Sbjct: 64 GTILFVGTKRQSREIIAEEAARAGMPYVDERWLGGMLTNFKTVKGSIKRLKDMEQAVEDG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL +L GI+D+ GLPD +F+VD K+A+ EAR+L +PIV Sbjct: 124 ALDQMTKKEALLFTRELAKLTSSLGGIKDLNGLPDALFIVDVGYHKIAVTEARKLGVPIV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ +DYVIPGNDDS R++ L+ VA A ++G A Sbjct: 184 GVVDTNHSPEGIDYVIPGNDDSGRAVRLYARGVADAILEGKA 225 >gi|88812377|ref|ZP_01127627.1| ribosomal protein S2 [Nitrococcus mobilis Nb-231] gi|88790384|gb|EAR21501.1| ribosomal protein S2 [Nitrococcus mobilis Nb-231] Length = 256 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 156/226 (69%), Gaps = 7/226 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ W+PKM YIF +RN HI++L +T+P+ +A+ + Sbjct: 1 MARVTMRQMLEAGVHFGHQTRYWDPKMAPYIFGQRNKIHIVNLEKTLPLYDEAMNYLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GGRILFV TK A + + E A R A VN +WLGGM+TN++TV +SI++ +DL++ Sbjct: 61 AANGGRILFVGTKRAAREALREEAVRCAMPYVNHRWLGGMLTNFRTVKRSIRRYKDLQQ- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G +K+E L++ R+ KL+RA GI DM LPD +FV+DT E++A+ EAR Sbjct: 120 --QEKDGTFNKLSKREVLSLHREMGKLERAFGGIVDMEALPDALFVIDTGFERIAVLEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +L IP+VAVVDTN++P +DYVIPGNDD+ R++ L+ A A ID Sbjct: 178 KLNIPVVAVVDTNNSPRAIDYVIPGNDDAFRAVRLYLKGAADAIID 223 >gi|78222464|ref|YP_384211.1| 30S ribosomal protein S2 [Geobacter metallireducens GS-15] gi|123756464|sp|Q39W88|RS2_GEOMG RecName: Full=30S ribosomal protein S2 gi|78193719|gb|ABB31486.1| SSU ribosomal protein S2P [Geobacter metallireducens GS-15] Length = 251 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 149/220 (67%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + + G Sbjct: 5 TMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVRECAQSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 ILFV TK QA D + E A R Y VN +WLGGM+TN+ TV QSI +L+ L+ + + Sbjct: 65 ETILFVGTKKQAQDAIGEEASRCNMYYVNQRWLGGMLTNFATVKQSIDRLKRLDAMFADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +TKKE L +E++R KL++ L GI+ MG +P +FV+D E +AI EA++L IP+V Sbjct: 125 TVEAYTKKEALQLEKERQKLEKTLGGIKGMGKVPGALFVIDPKNETIAINEAKKLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +PD +DYVIPGNDD+ R+I L +A A ++G Sbjct: 185 AVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVLEG 224 >gi|331005979|ref|ZP_08329324.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC1989] gi|330420224|gb|EGG94545.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC1989] Length = 251 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM++YIF RNN HII+L TVP +AL +I ++ Sbjct: 5 SMRDMLQAGVHFGHQTRYWNPKMDQYIFGARNNIHIINLEHTVPAFNEALDMIKKMGSQK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 +IL V TK A + E A+R+ Q V+ +WLGGM+TN+KT+ SI++ R+ E + + Sbjct: 65 KKILMVGTKRAAQKTIKEQAERAGQPFVSHRWLGGMLTNYKTIRTSIRRFREFETQSQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R +KL+ ++ GI+DMGGLPD +FVVD E++AI EA +L IP+ Sbjct: 125 TFDKLTKKEALMRTRAMEKLELSIGGIKDMGGLPDALFVVDVEHERIAINEANKLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDTNSNP VDYVIPGNDD+ R+I L+ VA A +DG+A Sbjct: 185 GIVDTNSNPAGVDYVIPGNDDAIRAIKLYVTAVADACVDGLA 226 >gi|330964141|gb|EGH64401.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 247 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKKKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|302879004|ref|YP_003847568.1| 30S ribosomal protein S2 [Gallionella capsiferriformans ES-2] gi|302581793|gb|ADL55804.1| ribosomal protein S2 [Gallionella capsiferriformans ES-2] Length = 242 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 156/222 (70%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+L++GV FGH+ WNPKM +IF RN HII+L ++V + +A + A+ Sbjct: 4 TMRQMLDAGVHFGHQTRFWNPKMAPFIFGHRNRIHIINLEKSVALFAEAESYVRKLSAKK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFVATK QA + + E A R+ VN +WLGGM+TN+KTV QSI++LR+LE + + Sbjct: 64 GTVLFVATKRQAREILQEEAVRANSPFVNHRWLGGMLTNYKTVQQSIKRLRELEAITAEG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G +KKE L + R+ +KL R+L GI+DM LPD +FV+D +K AI EA++L IP++ Sbjct: 124 AEGVSKKEALVMARELEKLNRSLGGIKDMPNLPDAIFVIDVGYQKGAIVEAKKLGIPVIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +VDTN++P VD+VIPGNDDS+++I L+ +A A ++G A+ Sbjct: 184 IVDTNNSPIGVDFVIPGNDDSTQAIRLYARGIADAVLEGRAQ 225 >gi|145295929|ref|YP_001138750.1| 30S ribosomal protein S2 [Corynebacterium glutamicum R] gi|166225266|sp|A4QF32|RS2_CORGB RecName: Full=30S ribosomal protein S2 gi|140845849|dbj|BAF54848.1| hypothetical protein [Corynebacterium glutamicum R] Length = 264 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 157/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDQAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GTVLFVGTKKQAQEAVQVEADRVGMPYVNHRWLGGMLTNFQTVSKRLNRMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N +G TK+E L + R+R KL+R L GI +M +P ++++DTN+E +A+ EA +L IP+ Sbjct: 125 NGYEGRTKREVLMLTRERTKLERVLGGIAEMTRVPSALWIIDTNKEHIAVAEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD+VD+ +PGNDD+ RS AL ++++A +G Sbjct: 185 VAILDTNCDPDVVDFPVPGNDDAIRSTALLSRVISTAVEEG 225 >gi|19553229|ref|NP_601231.1| 30S ribosomal protein S2 [Corynebacterium glutamicum ATCC 13032] gi|62390865|ref|YP_226267.1| 30S ribosomal protein S2 [Corynebacterium glutamicum ATCC 13032] gi|25009199|sp|Q8NP01|RS2_CORGL RecName: Full=30S ribosomal protein S2 gi|21324796|dbj|BAB99419.1| Ribosomal protein S2 [Corynebacterium glutamicum ATCC 13032] gi|41326204|emb|CAF20366.1| 30S RIBOSOMAL PROTEIN S2 [Corynebacterium glutamicum ATCC 13032] Length = 272 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 157/221 (71%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDQAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V A R VN +WLGGM+TN++TVS+ + ++++L+ + E Sbjct: 65 GTVLFVGTKKQAQEAVQVEADRVGMPYVNHRWLGGMLTNFQTVSKRLNRMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N +G TK+E L + R+R KL+R L GI +M +P ++++DTN+E +A+ EA +L IP+ Sbjct: 125 NGYEGRTKREVLMLTRERTKLERVLGGIAEMTRVPSALWIIDTNKEHIAVAEAHKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PD+VD+ +PGNDD+ RS AL ++++A +G Sbjct: 185 VAILDTNCDPDVVDFPVPGNDDAIRSTALLSRVISTAVEEG 225 >gi|218888008|ref|YP_002437329.1| 30S ribosomal protein S2 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226697637|sp|B8DSA6|RS2_DESVM RecName: Full=30S ribosomal protein S2 gi|218758962|gb|ACL09861.1| ribosomal protein S2 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 271 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 106/233 (45%), Positives = 156/233 (66%), Gaps = 1/233 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV + + A + DTV G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLFRTAHDKVVDTVVNG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G+++F+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +SI +L+ LE + + Sbjct: 65 GKVVFIGTKRQAQEAVAVEAGRAGQFYVTNRWMGGTLTNFTTIQKSIDRLKKLEAMFADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L ++R+ DKL L GI++M LP L F+VD +RE +A++E R+L IPIV Sbjct: 125 TVNKYQKKEILRMQREMDKLLATLGGIKEMDRLPQLAFIVDPHREDIAVKECRKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 AV DTN +PDL+D+VIPGNDD+ R+I LF +A A ++G A + G D + Sbjct: 185 AVTDTNCDPDLIDFVIPGNDDAIRAIKLFVAAIADACLEGDAMRKERKGKDAE 237 >gi|65321155|ref|ZP_00394114.1| COG0052: Ribosomal protein S2 [Bacillus anthracis str. A2012] Length = 233 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A +V+ D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 64 GGDILFVGTKKQAQXAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|116333955|ref|YP_795482.1| ribosomal protein S2 [Lactobacillus brevis ATCC 367] gi|122269361|sp|Q03QS1|RS2_LACBA RecName: Full=30S ribosomal protein S2 gi|116099302|gb|ABJ64451.1| SSU ribosomal protein S2P [Lactobacillus brevis ATCC 367] Length = 267 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 152/221 (68%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + D A+ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDAAYNYMKDEAAK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A R+ QY VN +WLGG +TNW+T+ I++L+ L+++ Sbjct: 64 GAVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWETIQTRIKRLKSLKKMATD 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE +++ +DKL+R L GI DM LPD+MF+VD +E++A+ EA++L IPI Sbjct: 124 GTFDVLPKKEVSLLKKSQDKLERFLGGIEDMPKLPDVMFIVDPRKEQIAVHEAQKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D VIP NDD+ R++ L +A A ++G Sbjct: 184 VAMVDTNTDPDEIDVVIPSNDDAIRAVRLITSKMADAIVEG 224 >gi|121998248|ref|YP_001003035.1| 30S ribosomal protein S2 [Halorhodospira halophila SL1] gi|166225278|sp|A1WX21|RS2_HALHL RecName: Full=30S ribosomal protein S2 gi|121589653|gb|ABM62233.1| SSU ribosomal protein S2P [Halorhodospira halophila SL1] Length = 247 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 114/232 (49%), Positives = 154/232 (66%), Gaps = 7/232 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++RQ+LE+GV FGH+ W+PKM YIF ERN HII+L +T+P+ + AL + G Sbjct: 5 SMRQMLEAGVHFGHQTRFWDPKMRPYIFGERNKIHIINLEKTLPLYKDALNFAGRLASNG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK A + V E A R V+ +WLGGMMTN++TV SI +L+DLE E Sbjct: 65 GKILFVGTKRPARELVREHAARCGMPYVDHRWLGGMMTNFRTVKHSIARLKDLE--TQAE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TK+E L + R+R+KL R+L GI++M LPD MFVVD E +AI EA++L IP Sbjct: 123 DGTFDKVTKREALALSREREKLDRSLSGIKNMERLPDAMFVVDVGYEHIAISEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 ++ VVDTN +P VDYVIPGNDD+ R+I L+ +A A I+ A+Q S A Sbjct: 183 VIGVVDTNCSPREVDYVIPGNDDAIRAIELYVSGIADAVIE--AKQASSHAA 232 >gi|289578402|ref|YP_003477029.1| ribosomal protein S2 [Thermoanaerobacter italicus Ab9] gi|297544678|ref|YP_003676980.1| 30S ribosomal protein S2 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528115|gb|ADD02467.1| ribosomal protein S2 [Thermoanaerobacter italicus Ab9] gi|296842453|gb|ADH60969.1| ribosomal protein S2 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 235 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + V G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKGLVMEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ +E Sbjct: 65 GTILFVGTKKQAQDSIREEAERCGMFYVNQRWLGGTLTNFKTIKGRIQRLKELKKM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L IP Sbjct: 123 DGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PDL+DY IPGNDD+ R++ L +A A I+G Sbjct: 183 IVAIVDTNCDPDLIDYPIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|326791510|ref|YP_004309331.1| ribosomal protein S2 [Clostridium lentocellum DSM 5427] gi|326542274|gb|ADZ84133.1| ribosomal protein S2 [Clostridium lentocellum DSM 5427] Length = 247 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 158/241 (65%), Gaps = 9/241 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T + +A VI + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTAKKVDEAYNVIREAAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + A+RS Y VN++WLGGM+TN+ T+ + +L+ LE + Sbjct: 64 GGKVLFVGTKKQAQESIKSEAERSGMYYVNNRWLGGMLTNFSTIKSRVARLKQLETM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + + ++ DKL++ L GI++M LP LMFVVD +E++AIQEA L Sbjct: 121 EQDGTFEVLPKKEVIELRKEMDKLEKNLGGIKEMKELPSLMFVVDPRKERIAIQEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A I+ A Q A T++ Sbjct: 181 IPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLIVAKMADAIIE--ANQGEIFEASTEAVV 238 Query: 242 E 242 E Sbjct: 239 E 239 >gi|227510241|ref|ZP_03940290.1| ribosomal protein S2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189893|gb|EEI69960.1| ribosomal protein S2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 268 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + ++ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDVAYNFMKEEASK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A R+ QY VN++WLGG +TNW T+ +++L+DL+++ Sbjct: 64 GAVVLFVGTKKQAQDSIAEEATRAGQYYVNNRWLGGTLTNWNTIQSRVKRLKDLKKMATD 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++RDKL+R L GI DM LPD++F+VD +E++A+ EA++L IPI Sbjct: 124 GTFDVLPKKEVSLLMKQRDKLERFLGGIEDMPKLPDVLFIVDPRKEQIAVHEAQKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D VIP NDD+ R++ L +A+A I+G Sbjct: 184 VAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSTMANAIIEG 224 >gi|188996518|ref|YP_001930769.1| ribosomal protein S2 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931585|gb|ACD66215.1| ribosomal protein S2 [Sulfurihydrogenibium sp. YO3AOP1] Length = 294 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 155/225 (68%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++R+LLE+GV FGH WNPKM+ YI+ +RN HIIDLS+TVP+ ++AL+ +++ VA Sbjct: 4 EISMRELLEAGVHFGHPVRRWNPKMKPYIYTKRNGIHIIDLSKTVPLFRQALEFVTEQVA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILF+ TK QA + + E AKR Y VN KWLGGM TN+ TV +SI KLR L+++ Sbjct: 64 NGAEILFLGTKKQAQNIIEEEAKRCRAYYVNYKWLGGMFTNFATVKKSIAKLRKLQKM-- 121 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G KKE + ++++KL++ L GI DM +PD++FVVDT RE A+ EA +L Sbjct: 122 -EAEGVFEVLPKKEARTLMKQKEKLEKYLKGIVDMDRVPDIIFVVDTVRENNAVTEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VA+ DTN +PD +DY IPGNDD+ ++I L +A A I+G Sbjct: 181 GVRVVAIADTNCDPDKIDYPIPGNDDAIKAIQLITSKIADAVIEG 225 >gi|268607901|ref|ZP_06141632.1| 30S ribosomal protein S2 [Ruminococcus flavefaciens FD-1] Length = 251 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/228 (48%), Positives = 156/228 (68%), Gaps = 7/228 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L+ A + D A+G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLEDAYMFVRDIAAQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V E A R+ + VN++WLGGM+TN+KT+ I++L L + +E Sbjct: 65 GEVLFVGTKKQAGDSVKEEATRAGAHYVNARWLGGMLTNFKTIQTRIKRLEQLHTM--EE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + +KL++ L GI++M LP +F+VD +EK+A+ EA++L IP Sbjct: 123 DGTFALLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPAALFIVDPRKEKIAVAEAKKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IVA+VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G RQ S Sbjct: 183 IVAIVDTNCDPDEVDYVIPGNDDAIRAVKLIAGTIANAVIEG--RQGS 228 >gi|291276700|ref|YP_003516472.1| 30S ribosomal protein S2 [Helicobacter mustelae 12198] gi|290963894|emb|CBG39731.1| 30S ribosomal protein S2 [Helicobacter mustelae 12198] Length = 264 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 152/225 (67%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+R+IF R N HIIDL +T+ + ++ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QAS+ + E A++ VN +WLGGM+TN+ T+ +SI+KL +EE+ E Sbjct: 63 KTIMFVGTKKQASETLKEYAEKIQIPYVNYRWLGGMLTNFGTIKKSIRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKERL + RK++KL + L G+R M PD++FV+D +EK+A+ EARRL I Sbjct: 120 ASGQIDMLTKKERLMVLRKKEKLNKYLGGVRHMKKAPDVVFVIDVVKEKIAVAEARRLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PD+VDY IPGNDD+ RSI LFC + A ++G A Sbjct: 180 PVVAPLDTNCDPDVVDYPIPGNDDAIRSIQLFCKEMTEAIVEGRA 224 >gi|61215665|sp|Q7MAK0|RS2_WOLSU RecName: Full=30S ribosomal protein S2 gi|34482354|emb|CAE09355.1| 30S RIBOSOMAL PROTEIN S2 [Wolinella succinogenes] Length = 271 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 112/249 (44%), Positives = 162/249 (65%), Gaps = 5/249 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N HIIDL +T+ + V+ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIHIIDLQKTLRYFRYTYNVVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 ++FV TK QAS+ + + A VN +WLGGM+TN+ T+ +SI+KL +EE+ + Sbjct: 63 KTVMFVGTKKQASETIKQYADTINAPYVNYRWLGGMLTNFSTIKKSIRKLEVIEEMEASG 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + TKKE+L + RK++KL++ L G+R M PD++FVVD +EK+A+ EARRL IP+V Sbjct: 123 QIELLTKKEKLMLTRKKEKLEKYLGGVRHMKKAPDMLFVVDAAKEKIAVAEARRLGIPVV 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A +DTN +PD+VD+ IPGNDD+ RSI LFC +A A +G + G++ A E V Sbjct: 183 APLDTNCDPDVVDFPIPGNDDAIRSIQLFCKEMAEAIQEG----RALAGSEEGEATEEVT 238 Query: 246 HSKEGMQLE 254 + E + E Sbjct: 239 PASEAEKQE 247 >gi|227513170|ref|ZP_03943219.1| ribosomal protein S2 [Lactobacillus buchneri ATCC 11577] gi|227083551|gb|EEI18863.1| ribosomal protein S2 [Lactobacillus buchneri ATCC 11577] Length = 268 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + ++ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDVAYNFMKEEASK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A R+ QY VN++WLGG +TNW T+ +++L+DL+++ Sbjct: 64 GAVVLFVGTKKQAQDSIAEEATRAGQYYVNNRWLGGTLTNWNTIQSRVKRLKDLKKMATD 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++RDKL+R L GI DM LPD++F+VD +E++A+ EA++L IPI Sbjct: 124 GTFDVLPKKEVSLLMKQRDKLERFLGGIEDMPKLPDVLFIVDPRKEQIAVHEAQKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D VIP NDD+ R++ L +A+A I+G Sbjct: 184 VAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSTMANAIIEG 224 >gi|21672506|ref|NP_660573.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009196|sp|Q8K9T0|RS2_BUCAP RecName: Full=30S ribosomal protein S2 gi|21623126|gb|AAM67784.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 244 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 109/214 (50%), Positives = 146/214 (68%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL + + Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTLPMFNFALSELKKISLKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G+ILFV TK AS + E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE E + Sbjct: 65 GKILFVGTKRAASKKIKETALNCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETESQDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI+EA L IP+ Sbjct: 125 TFSKITKKEALIRTRELSKLENSLGGIKNMGGLPDCLFVIDAAHENIAIKEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+VDTNSNPD VDYVIPGNDD+ RS+ L+ V+ Sbjct: 185 AIVDTNSNPDGVDYVIPGNDDAIRSVTLYLQAVS 218 >gi|304436538|ref|ZP_07396511.1| 30S ribosomal protein S2 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370481|gb|EFM24133.1| 30S ribosomal protein S2 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 234 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 106/223 (47%), Positives = 152/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLRSVAQE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LF+ TK QA + + E A R+ Y VN +WLGGM+TN++T+ + I +L+ LEE+ + Sbjct: 64 GKSVLFIGTKKQAQEAIREEALRANMYYVNERWLGGMLTNFQTIQRRIHRLKALEEM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F TKKE + +++KL+R L GI+DM LP +FVVD +E++A+ EAR+L I Sbjct: 122 ENGTFEVLTKKEVQGLRHEKEKLERYLGGIKDMNRLPGALFVVDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEG 224 >gi|291533219|emb|CBL06332.1| SSU ribosomal protein S2P [Megamonas hypermegale ART12/1] Length = 243 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 106/223 (47%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYDFLRSVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + V E A +S + VN +WLGGMMTN+ T+ +SI +L++LE + + Sbjct: 64 GKSILFVGTKKQAQEAVKEEALKSGMFYVNERWLGGMMTNFATIRKSINRLKELEAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F +KKE L ++R+++KL+++L GI+DM LP +F+VD +E++A+ EA++L I Sbjct: 122 EDGTFEVLSKKEVLALKREQEKLEKSLGGIKDMEELPGALFIVDPRKERIAVAEAKKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSRMADAVIEG 224 >gi|160872239|ref|ZP_02062371.1| ribosomal protein S2 [Rickettsiella grylli] gi|159121038|gb|EDP46376.1| ribosomal protein S2 [Rickettsiella grylli] Length = 262 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 120/260 (46%), Positives = 171/260 (65%), Gaps = 12/260 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR- 65 T+RQL E+GV FGHR PKM YI+ RN IIDL +T + +AL I+ AR Sbjct: 6 TLRQLFEAGVHFGHRTCFREPKMMPYIYGVRNGISIIDLEKTREYITEALHYIAKIAARP 65 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +ILFV TK A D V E A R VN +WLGG++TN++T+ QSI++L++LE L +K Sbjct: 66 GSKILFVGTKRAARDLVKEQALRCGMPYVNHRWLGGLLTNYRTIRQSIKRLKELE-LQSK 124 Query: 126 E---NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + NQ TKKE LN++R+ DKL+R+L GI+DM GLPD++FV+D E +AI EA++L+I Sbjct: 125 DGRFNQ-LTKKEALNLQRQMDKLERSLGGIKDMSGLPDVLFVIDRGYEHIAICEAQKLKI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA-- 240 P++++VDTN +P+ +DYVIPGNDD+SR+I L+ +V+ ++ AR + AD A Sbjct: 184 PVISIVDTNHSPEGIDYVIPGNDDASRAITLYTQMVSETILE--ARAEAKKRADLTRAEA 241 Query: 241 --GETVVHSKEGMQLEEDSQ 258 GE V + + E+ Q Sbjct: 242 ENGENQVPERASTKSSEEKQ 261 >gi|161760550|ref|NP_906455.2| 30S ribosomal protein S2 [Wolinella succinogenes DSM 1740] Length = 273 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 115/262 (43%), Positives = 167/262 (63%), Gaps = 7/262 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N HIIDL +T+ + V+ D A G Sbjct: 5 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIHIIDLQKTLRYFRYTYNVVRDAAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 ++FV TK QAS+ + + A VN +WLGGM+TN+ T+ +SI+KL +EE+ + Sbjct: 65 KTVMFVGTKKQASETIKQYADTINAPYVNYRWLGGMLTNFSTIKKSIRKLEVIEEMEASG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + TKKE+L + RK++KL++ L G+R M PD++FVVD +EK+A+ EARRL IP+V Sbjct: 125 QIELLTKKEKLMLTRKKEKLEKYLGGVRHMKKAPDMLFVVDAAKEKIAVAEARRLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A +DTN +PD+VD+ IPGNDD+ RSI LFC +A A +G + G++ A E V Sbjct: 185 APLDTNCDPDVVDFPIPGNDDAIRSIQLFCKEMAEAIQEG----RALAGSEEGEATEEVT 240 Query: 246 HSKEGMQLE--EDSQSSESSVL 265 + E + E ++ S E L Sbjct: 241 PASEAEKQEVLAEAMSEEGDAL 262 >gi|332982471|ref|YP_004463912.1| 30S ribosomal protein S2P [Mahella australiensis 50-1 BON] gi|332700149|gb|AEE97090.1| SSU ribosomal protein S2P [Mahella australiensis 50-1 BON] Length = 277 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 115/240 (47%), Positives = 157/240 (65%), Gaps = 9/240 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L A + I + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKNLDVAYKFIKEVAESG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E AKR + VN +WLGGM+TN+KT+ Q +Q+L +LE N E Sbjct: 65 QDILFVGTKKQAQEAIEEEAKRCGMHYVNQRWLGGMLTNFKTIRQRVQRLTELE---NME 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + + +++KL++ L GI++M LP M+VVD +E +A+ EAR L I Sbjct: 122 QDGTFDMLPKKEVIKLRLEKEKLEKNLSGIKNMRSLPGAMYVVDPRKEHIAVSEARILGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PIVA+VDTN +PD VDYVIPGNDD+ R+I L L+A A ++ ARQ +G + S+ E Sbjct: 182 PIVAIVDTNCDPDEVDYVIPGNDDAIRAIKLISQLIADAVLE--ARQGEQLGDEETSSPE 239 >gi|300743953|ref|ZP_07072973.1| ribosomal protein S2 [Rothia dentocariosa M567] gi|311113203|ref|YP_003984425.1| 30S ribosomal protein S2 [Rothia dentocariosa ATCC 17931] gi|300380314|gb|EFJ76877.1| ribosomal protein S2 [Rothia dentocariosa M567] gi|310944697|gb|ADP40991.1| 30S ribosomal protein S2 [Rothia dentocariosa ATCC 17931] Length = 264 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 105/231 (45%), Positives = 162/231 (70%), Gaps = 2/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R++L+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + KA + + T Sbjct: 1 MPVVTMREMLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSLEFIDKAFEAVKST 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ T+++SI+++++LE++ Sbjct: 61 VAHGGNILFVGTKKQAQEVIAEQATRVNMPYVNHRWLGGMLTNFSTIAKSIERMKELEQI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+ +KL++ L GIR++ +P L++VVDT +E LA+ EA++L Sbjct: 121 DFDDVAGSRYTKKELLLMRREFEKLEKTLGGIRNLSKVPSLVWVVDTKKEHLAVNEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+VA++DTN +PD V + IPGNDD+ RS+ L +VA A G+ +++ Sbjct: 181 GIPVVAILDTNCDPDEVAFPIPGNDDAIRSVNLLTRVVADAVAAGLIERNA 231 >gi|313901481|ref|ZP_07834934.1| SSU ribosomal protein S2P [Thermaerobacter subterraneus DSM 13965] gi|313468255|gb|EFR63716.1| SSU ribosomal protein S2P [Thermaerobacter subterraneus DSM 13965] Length = 233 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 106/227 (46%), Positives = 155/227 (68%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +L +A + + Sbjct: 1 MPVVAMKQLLEAGVHFGHQTRRWNPKMRPYIFMERNGIYIIDLQKTVRLLDEAYHFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GGRILFV TK QA + + E A R ++ +N +WLGG +TN+ T+ I +L +LE++ Sbjct: 61 VAQGGRILFVGTKKQAREAIAEEATRCGEFYINERWLGGTLTNFATIRTRIDRLAELEQM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E +G KKE + R+++KL++ L GI+ M LPD ++VVD +EK+A+ EAR Sbjct: 121 ---EAEGHFDRLPKKEVARLLREKEKLEKYLGGIKGMKDLPDAVYVVDPRKEKIAVSEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G Sbjct: 178 KLGIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVRLITGKIADAVLEG 224 >gi|116495068|ref|YP_806802.1| 30S ribosomal protein S2 [Lactobacillus casei ATCC 334] gi|191638571|ref|YP_001987737.1| 30S ribosomal protein S2 [Lactobacillus casei BL23] gi|227534920|ref|ZP_03964969.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631337|ref|ZP_04674368.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066631|ref|YP_003788654.1| 30S ribosomal protein L2 [Lactobacillus casei str. Zhang] gi|122263515|sp|Q038L2|RS2_LACC3 RecName: Full=30S ribosomal protein S2 gi|238693050|sp|B3WES8|RS2_LACCB RecName: Full=30S ribosomal protein S2 gi|116105218|gb|ABJ70360.1| SSU ribosomal protein S2P [Lactobacillus casei ATCC 334] gi|190712873|emb|CAQ66879.1| 30S ribosomal protein S2 [Lactobacillus casei BL23] gi|227187676|gb|EEI67743.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525802|gb|EEQ64803.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439038|gb|ADK18804.1| Ribosomal protein S2 [Lactobacillus casei str. Zhang] gi|327382610|gb|AEA54086.1| 30S ribosomal protein S2 [Lactobacillus casei LC2W] gi|327385807|gb|AEA57281.1| 30S ribosomal protein S2 [Lactobacillus casei BD-II] Length = 262 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/253 (43%), Positives = 164/253 (64%), Gaps = 8/253 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + + Sbjct: 4 LSMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDDAYNFVKEEAQN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ I++L+D++++ Sbjct: 64 GGVFLFVGTKKQAQDAIAEEATRAGQYYVNHRWLGGTLTNWNTIQTRIKRLKDIKKMATD 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE +++++DKL++ L GI DM +PD++F+VD +EK+A+QEA++L IPI Sbjct: 124 GTFDVLPKKEVSLLKKQQDKLEKFLGGIEDMPRIPDVLFIVDPRKEKIAVQEAQKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA------RQHSYMGADTK 238 VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Q + AD K Sbjct: 184 VAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAIIEGNQGEDQDDAQEQQVAADKK 243 Query: 239 S-AGETVVHSKEG 250 + + E +V + EG Sbjct: 244 ADSMEDIVEAVEG 256 >gi|70728558|ref|YP_258307.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf-5] gi|123748533|sp|Q4KHH6|RS2_PSEF5 RecName: Full=30S ribosomal protein S2 gi|68342857|gb|AAY90463.1| ribosomal protein S2 [Pseudomonas fluorescens Pf-5] Length = 245 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 150/226 (66%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|288906353|ref|YP_003431575.1| ribosomal protein S2 [Streptococcus gallolyticus UCN34] gi|325979365|ref|YP_004289081.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733079|emb|CBI14660.1| ribosomal protein S2 [Streptococcus gallolyticus UCN34] gi|325179293|emb|CBZ49337.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 255 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADAAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 224 >gi|306832396|ref|ZP_07465549.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425436|gb|EFM28555.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 275 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D A Sbjct: 24 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADAAYEFVRDAAAN 83 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 84 DAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM--E 141 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 142 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 201 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 202 PVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 244 >gi|224372497|ref|YP_002606869.1| 30S ribosomal protein S2 [Nautilia profundicola AmH] gi|223588781|gb|ACM92517.1| ribosomal protein S2 [Nautilia profundicola AmH] Length = 279 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 108/223 (48%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ ++ A V+ + G Sbjct: 6 TMKDLLECGVHFGHQKRRWNPKMKKYIFGVRKNIYIIDLQKTLRHIKYAYNVVKNAAEEG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA D + E A+R VN +WLGGM+TN+KT+ +SI+KL +E++ E Sbjct: 66 KTILFVGTKKQAIDAIKEHAERCGMPYVNHRWLGGMLTNFKTIQKSIRKLEIIEKM---E 122 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKERL + R++ KL++ + GIR M +PD++F++DT +EK+A+ EA +L + Sbjct: 123 ETGQINLLTKKERLILARRKAKLEKFIGGIRHMKTIPDMLFIIDTVKEKIAVGEANKLGL 182 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA VDTN +PDL+D IPGNDD+ RS+ LFC +A A I+G Sbjct: 183 PIVAPVDTNCDPDLIDVPIPGNDDAIRSVNLFCKTIADAIIEG 225 >gi|134094560|ref|YP_001099635.1| 30S ribosomal protein S2 [Herminiimonas arsenicoxydans] gi|166225279|sp|A4G4S1|RS2_HERAR RecName: Full=30S ribosomal protein S2 gi|133738463|emb|CAL61508.1| 30S ribosomal subunit protein S2 [Herminiimonas arsenicoxydans] Length = 248 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM YIF RN HI++L +T+ M Q+A++ I + Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIVNLEKTLGMYQEAMKYIKQLSSNR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G +LFV TK QA + + A R+ V+ +WLGGM+TN+KT+ SI++L++LE L+ + Sbjct: 64 GTVLFVGTKRQARETIAAEAARAGMPYVDQRWLGGMLTNFKTIKTSIKRLKELEALVEDG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE L ER++ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP++ Sbjct: 124 SMEKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ V Y+IPGNDDSS++I L+ VA A ++G A Sbjct: 184 GVVDTNHSPEGVAYIIPGNDDSSKAIMLYARGVADAILEGRA 225 >gi|15614990|ref|NP_243293.1| 30S ribosomal protein S2 [Bacillus halodurans C-125] gi|20139933|sp|Q9KA63|RS2_BACHD RecName: Full=30S ribosomal protein S2 gi|10175047|dbj|BAB06146.1| 30S ribosomal protein S2 [Bacillus halodurans C-125] Length = 244 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVRELAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA D V E A+R Y +N +WLGG +TN++T+ + I +L+ LE++ + Sbjct: 64 GGKVLFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRIDRLKKLEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM LPD +FV+D +E++AI EA +L I Sbjct: 122 EDGTFDVLPKKEVILLKKEMERLEKFLGGIKDMNSLPDALFVIDPRKERIAIAEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++ Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVEA 224 >gi|167770591|ref|ZP_02442644.1| hypothetical protein ANACOL_01937 [Anaerotruncus colihominis DSM 17241] gi|167667186|gb|EDS11316.1| hypothetical protein ANACOL_01937 [Anaerotruncus colihominis DSM 17241] Length = 249 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 116/230 (50%), Positives = 158/230 (68%), Gaps = 11/230 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV L +A + D A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKLDEAYMFVRDLAANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V + A R+ Y VN++WLGGM+TN+KT+ + I +L L ++ +E Sbjct: 65 GNLLFVGTKKQAGDSVRDEATRAGAYYVNARWLGGMLTNFKTIRRRIDRLAQLRKM--QE 122 Query: 127 NQGF---TKKE--RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F KKE +LN+E +KL++ L GI+DM LP +FVVD +EK+A+ EAR+L Sbjct: 123 DGTFDLLPKKEVSKLNLE--IEKLEKFLGGIKDMKKLPSALFVVDPRKEKIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G RQ S Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLSATMADALIEG--RQGS 228 >gi|118603032|ref|YP_904247.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166226750|sp|A1AXW9|RS2_RUTMC RecName: Full=30S ribosomal protein S2 gi|118567971|gb|ABL02776.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 312 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 102/225 (45%), Positives = 154/225 (68%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++++LE+GV FGHR+ W+PKM R+I+ RN HII+L +T+P+ AL S Sbjct: 1 MAKTSMKKMLEAGVHFGHRSRFWSPKMGRFIYGTRNGVHIINLEKTLPLFNDALNFASKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK AS+ + + A R VN +WLGGMMTN+KT+ SI++L+DLE L Sbjct: 61 TAVGRSILFVGTKRAASNIIKQEAMRCGMPYVNHRWLGGMMTNYKTIKVSIKRLKDLEFL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + F KKE L + R+ +KL+R+L GI+D+ +PD++FV+D EK A+ EA++L + Sbjct: 121 AEENFNQFGKKEALMMTREMEKLERSLGGIKDLNDIPDVIFVIDIGVEKNAVAEAKKLHL 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 PI+ +VDTN +P+ +DYVIPGNDDS R+I + +A+A ++ A Sbjct: 181 PIIGIVDTNHSPEGIDYVIPGNDDSIRAIGYYAREIANAILEAKA 225 >gi|323143560|ref|ZP_08078237.1| ribosomal protein S2 [Succinatimonas hippei YIT 12066] gi|322416623|gb|EFY07280.1| ribosomal protein S2 [Succinatimonas hippei YIT 12066] Length = 254 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 108/208 (51%), Positives = 145/208 (69%), Gaps = 1/208 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ YIF RN HII+L +TV + AL +S VA G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKSYIFGHRNGVHIINLEKTVQCYEDALNFLSSVVAHKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 ++LFV TK A D + AA Q+ V+ +WLGGM+TNWKTV QSI++L++LE + + Sbjct: 61 KVLFVGTKRAACDQIGPAATSCGQFYVDHRWLGGMLTNWKTVRQSIKRLKELEIQSTDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ KL R+L GI+DMGGLPD +FV+D E +AI+EA L IP+VA Sbjct: 121 FDKLTKKEALLRTRELAKLNRSLGGIKDMGGLPDALFVIDAEVEHIAIKEANNLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALF 214 VVDTNS+PD V+YVIPGNDD+ R++ L+ Sbjct: 181 VVDTNSDPDGVNYVIPGNDDAIRAVELY 208 >gi|218288324|ref|ZP_03492623.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius LAA1] gi|258511400|ref|YP_003184834.1| 30S ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218241683|gb|EED08856.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius LAA1] gi|257478126|gb|ACV58445.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 233 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A + D A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVEEAYNFVRDLAASG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++L++LE++ +E Sbjct: 65 GTVLFVGTKKQAQEAVKEEAERCGMFYVNQRWLGGTLTNFNTIQKRIRRLQELEQM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + ++R++L++ L GI+ M LPD +F++D +E++A+ EAR+L IP Sbjct: 123 DGTFEVLPKKEVILLRKERERLEKFLGGIKGMKKLPDALFIIDPRKERIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKIADAVLEG 224 >gi|296110372|ref|YP_003620753.1| 30S ribosomal protein S2 [Leuconostoc kimchii IMSNU 11154] gi|295831903|gb|ADG39784.1| 30S ribosomal protein S2 [Leuconostoc kimchii IMSNU 11154] Length = 258 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 104/227 (45%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A I + Sbjct: 4 ISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFIRNASTD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 64 DANFLFVGTKKQASDAIAEEATRAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLETMAED 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L IP+ Sbjct: 124 GTFEQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLNIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S Sbjct: 184 VAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDS 230 >gi|224417784|ref|ZP_03655790.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|253827126|ref|ZP_04870011.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|313141327|ref|ZP_07803520.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|253510532|gb|EES89191.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|313130358|gb|EFR47975.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] Length = 266 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 153/225 (68%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+++IF R N HIIDL +T+ + ++ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI+KL +EE+ E Sbjct: 63 KTIMFVGTKKQASETLKQYAESVNAPYVNYRWLGGMLTNFSTIRKSIRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKE+L I+RK++KL + L G+R + PD++FV+D +EK+A+ EARRL I Sbjct: 120 SSGQIDLLTKKEKLMIQRKKEKLTQYLGGVRQLKKAPDMIFVIDAAKEKIAVAEARRLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PD+VDY IPGNDD+ RSI LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEIAEAITEGRA 224 >gi|77457328|ref|YP_346833.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf0-1] gi|123605789|sp|Q3KHB2|RS2_PSEPF RecName: Full=30S ribosomal protein S2 gi|77381331|gb|ABA72844.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf0-1] Length = 245 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 150/226 (66%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|16078712|ref|NP_389531.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. 168] gi|221309527|ref|ZP_03591374.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. 168] gi|221313851|ref|ZP_03595656.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318774|ref|ZP_03600068.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323046|ref|ZP_03604340.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. SMY] gi|296330864|ref|ZP_06873339.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674382|ref|YP_003866054.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii str. W23] gi|321315416|ref|YP_004207703.1| 30S ribosomal protein S2 [Bacillus subtilis BSn5] gi|3123268|sp|P21464|RS2_BACSU RecName: Full=30S ribosomal protein S2; AltName: Full=BS1; AltName: Full=Vegetative protein 209; Short=VEG209 gi|2634021|emb|CAB13522.1| ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. 168] gi|291484204|dbj|BAI85279.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. natto BEST195] gi|296151869|gb|EFG92743.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412626|gb|ADM37745.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii str. W23] gi|320021690|gb|ADV96676.1| 30S ribosomal protein S2 [Bacillus subtilis BSn5] Length = 246 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNLAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D V E A+RS Y VN +WLGG +TN++T+ + I++L+D+E++ + Sbjct: 64 GGKILFVGTKKQAQDSVKEEAQRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + ++++ ++L++ L GI+DM LPD +F++D +E++A+ EAR+L I Sbjct: 122 ENGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKDLPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|315453640|ref|YP_004073910.1| 30S ribosomal protein S2 [Helicobacter felis ATCC 49179] gi|315132692|emb|CBY83320.1| 30S ribosomal protein S2 [Helicobacter felis ATCC 49179] Length = 262 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +R+IF R N HIIDL +T+ + ++ D + Sbjct: 2 ITMKDLLECGVHFGHQTRRWNPKTKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASSE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G I+FV TK QASD + E A + VN +WLGGM+TN+ T+ +S++KL +E++ Sbjct: 62 GKTIMFVGTKKQASDALKEYAMQVNVPYVNYRWLGGMLTNFSTIRKSVRKLEIMEDM--- 118 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G TKKE+L I RK++KL++ L G+R M +PD+MFVVD +EK+A+ EARRL Sbjct: 119 ETSGQIDLLTKKEKLMILRKKEKLEKYLGGVRHMKQMPDMMFVVDVVKEKIAVAEARRLG 178 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI+A +DTN +PDLVDY IPGNDD+ RSI LFC +A A +G Sbjct: 179 IPIIAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMAEAITEG 222 >gi|223038847|ref|ZP_03609139.1| ribosomal protein S2 [Campylobacter rectus RM3267] gi|222879820|gb|EEF14909.1| ribosomal protein S2 [Campylobacter rectus RM3267] Length = 266 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 118/267 (44%), Positives = 168/267 (62%), Gaps = 14/267 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + V+ D A G Sbjct: 3 TMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNVVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + E Sbjct: 63 KTILFVGTKKQAGATLKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEAM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL +L GIR++ +PD++FV+DT +EK+A+ EA RL+I Sbjct: 120 EDGSINLLTKKEALMLRRKKEKLLASLGGIRNLKTVPDMIFVIDTVKEKIAVAEANRLKI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA +DTN +PD+VD+ IPGNDD+ RS+ LFC +A A I+G ++ K GE Sbjct: 180 PVVAPIDTNCDPDVVDFPIPGNDDAIRSVQLFCQEMAEAIIEGRSQLE-------KDGGE 232 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQE 269 + Q E+D+ +E++ D E Sbjct: 233 LEEGKEAVSQAEKDAVVNEAASEDFSE 259 >gi|325290377|ref|YP_004266558.1| SSU ribosomal protein S2P [Syntrophobotulus glycolicus DSM 8271] gi|324965778|gb|ADY56557.1| SSU ribosomal protein S2P [Syntrophobotulus glycolicus DSM 8271] Length = 266 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 152/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + D + G Sbjct: 29 SMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVDEAYNFVRDFSSNG 88 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V E A+R Y VN +WLGGM+TN++T+ + +Q+LR+LE++ E Sbjct: 89 GTVLFVGTKKQAQESVKEEAERCGMYFVNERWLGGMLTNFQTIQKRVQRLRELEKM---E 145 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + + KL+R L GI++M LPD++FVVD +E++A+ EARRL I Sbjct: 146 QEGVFEVLPKKEVAALRHEMGKLERFLGGIKEMKKLPDVLFVVDPRKERIAVAEARRLNI 205 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 206 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTAKIADAIIEG 248 >gi|320450762|ref|YP_004202858.1| 30S ribosomal protein S2 [Thermus scotoductus SA-01] gi|320150931|gb|ADW22309.1| 30S ribosomal protein S2 [Thermus scotoductus SA-01] Length = 262 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 153/221 (69%), Gaps = 5/221 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + + D RG Sbjct: 6 SIKELLEAGVHFGHERKRWNPKFSRYIYAERNGIHIIDLQKTMVELERTFRFLEDLAMRG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK QA D + A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L + Sbjct: 66 GTILFVGTKKQAQDIIRMEAERAGMPYVNQRWLGGMLTNFKTISQRVNRLEELENLFASP 125 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E Q KKE++ ++ + D+L++ L G R + LPD +FVVD +E +A++EAR+L IP+V Sbjct: 126 EIQDRPKKEQVRLKHELDRLQKYLSGFRRLKRLPDAIFVVDPTKEAIAVREARKLFIPVV 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+ DT+S+P+LVDY+IPGNDD+ RSI L+ S A+D I Sbjct: 186 ALADTDSDPELVDYIIPGNDDAIRSI----QLIVSRAVDLI 222 >gi|242308929|ref|ZP_04808084.1| 30S ribosomal protein S2 [Helicobacter pullorum MIT 98-5489] gi|239524593|gb|EEQ64459.1| 30S ribosomal protein S2 [Helicobacter pullorum MIT 98-5489] Length = 267 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 153/225 (68%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+++IF R N HIIDL +T+ + ++ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI+KL +EE+ E Sbjct: 63 KTIMFVGTKKQASETLKQYAESVNAPYVNYRWLGGMLTNFSTIRKSIRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKE+L I+RK++KL + L G+R + PD++FV+D +EK+A+ EARRL I Sbjct: 120 SSGQIDLLTKKEKLMIQRKKEKLTQYLGGVRQLKKAPDMIFVIDAAKEKIAVAEARRLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PD+VDY IPGNDD+ RSI LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEIAEAITEGRA 224 >gi|146308074|ref|YP_001188539.1| 30S ribosomal protein S2 [Pseudomonas mendocina ymp] gi|166226741|sp|A4XWU1|RS2_PSEMY RecName: Full=30S ribosomal protein S2 gi|145576275|gb|ABP85807.1| SSU ribosomal protein S2P [Pseudomonas mendocina ymp] Length = 247 Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGSPFVDHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRG 224 >gi|330807781|ref|YP_004352243.1| 30S ribosomal protein S2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375889|gb|AEA67239.1| 30S ribosomal protein S2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 245 Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 110/226 (48%), Positives = 150/226 (66%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQSEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|30021915|ref|NP_833546.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 14579] gi|206972651|ref|ZP_03233592.1| 30S ribosomal protein S2 [Bacillus cereus AH1134] gi|218235460|ref|YP_002368628.1| 30S ribosomal protein S2 [Bacillus cereus B4264] gi|218898980|ref|YP_002447391.1| ribosomal protein S2 [Bacillus cereus G9842] gi|228902330|ref|ZP_04066487.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 4222] gi|228909651|ref|ZP_04073474.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 200] gi|228922581|ref|ZP_04085881.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228966772|ref|ZP_04127816.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228980433|ref|ZP_04140743.1| 30S ribosomal protein S2 [Bacillus thuringiensis Bt407] gi|229019022|ref|ZP_04175863.1| 30S ribosomal protein S2 [Bacillus cereus AH1273] gi|229047513|ref|ZP_04193103.1| 30S ribosomal protein S2 [Bacillus cereus AH676] gi|229071325|ref|ZP_04204548.1| 30S ribosomal protein S2 [Bacillus cereus F65185] gi|229081082|ref|ZP_04213592.1| 30S ribosomal protein S2 [Bacillus cereus Rock4-2] gi|229098296|ref|ZP_04229243.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-29] gi|229111298|ref|ZP_04240851.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-15] gi|229129103|ref|ZP_04258076.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-Cer4] gi|229146398|ref|ZP_04274769.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST24] gi|229152026|ref|ZP_04280221.1| 30S ribosomal protein S2 [Bacillus cereus m1550] gi|229180103|ref|ZP_04307447.1| 30S ribosomal protein S2 [Bacillus cereus 172560W] gi|229191996|ref|ZP_04318966.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 10876] gi|296504322|ref|YP_003666022.1| 30S ribosomal protein S2 [Bacillus thuringiensis BMB171] gi|38258298|sp|Q819X9|RS2_BACCR RecName: Full=30S ribosomal protein S2 gi|226695072|sp|B7IUI6|RS2_BACC2 RecName: Full=30S ribosomal protein S2 gi|226732173|sp|B7HDV0|RS2_BACC4 RecName: Full=30S ribosomal protein S2 gi|29897471|gb|AAP10747.1| SSU ribosomal protein S2P [Bacillus cereus ATCC 14579] gi|206732408|gb|EDZ49589.1| 30S ribosomal protein S2 [Bacillus cereus AH1134] gi|218163417|gb|ACK63409.1| ribosomal protein S2 [Bacillus cereus B4264] gi|218540934|gb|ACK93328.1| ribosomal protein S2 [Bacillus cereus G9842] gi|228591547|gb|EEK49396.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 10876] gi|228603312|gb|EEK60789.1| 30S ribosomal protein S2 [Bacillus cereus 172560W] gi|228631375|gb|EEK88009.1| 30S ribosomal protein S2 [Bacillus cereus m1550] gi|228637031|gb|EEK93490.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST24] gi|228654340|gb|EEL10205.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-Cer4] gi|228672074|gb|EEL27365.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-15] gi|228685194|gb|EEL39125.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-29] gi|228702126|gb|EEL54602.1| 30S ribosomal protein S2 [Bacillus cereus Rock4-2] gi|228711779|gb|EEL63731.1| 30S ribosomal protein S2 [Bacillus cereus F65185] gi|228723760|gb|EEL75115.1| 30S ribosomal protein S2 [Bacillus cereus AH676] gi|228742262|gb|EEL92421.1| 30S ribosomal protein S2 [Bacillus cereus AH1273] gi|228779253|gb|EEM27510.1| 30S ribosomal protein S2 [Bacillus thuringiensis Bt407] gi|228792871|gb|EEM40429.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228837010|gb|EEM82351.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849940|gb|EEM94771.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 200] gi|228857299|gb|EEN01802.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 4222] gi|296325374|gb|ADH08302.1| 30S ribosomal protein S2 [Bacillus thuringiensis BMB171] gi|326941595|gb|AEA17491.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar chinensis CT-43] Length = 233 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 64 GGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|209573697|sp|A5CE04|RS2_ORITB RecName: Full=30S ribosomal protein S2 Length = 291 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 110/238 (46%), Positives = 158/238 (66%), Gaps = 4/238 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 L TI +LL++G+ +GH+ WNPKM YI+ +R++ HII+L TV + +VI Sbjct: 8 TLSSVTISELLDAGIHYGHKASRWNPKMAPYIYGKRDDVHIINLDYTVSQIDVISKVIYK 67 Query: 62 TVA-RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + GRILFV T+ D V + A+ QY V +WLGGM+TNW TVS++I KL LE Sbjct: 68 EIKEKNGRILFVDTRRH-RDIVAQYAENCGQYYVTHRWLGGMLTNWVTVSKAINKLDQLE 126 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + L + G+TK+E L+++R RD L R+ GIR+MGG P L+ V+D N++ +A++EAR Sbjct: 127 KKLADPEKIVGYTKREILSMQRMRDNLHRSFGGIRNMGGKPTLLIVMDINKDHIAVKEAR 186 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 R +IPI+A+VDTNS+PDLVDY IPGNDD+ RSI L+C + + A + I + G D Sbjct: 187 REKIPIIAIVDTNSDPDLVDYPIPGNDDAIRSIRLYCKIFSDAVLLAIEHMLAASGVD 244 >gi|149241276|pdb|2E5L|B Chain B, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via The Shine- Dalgarno Interaction Length = 227 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D Sbjct: 3 EITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAM 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 RGG ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L Sbjct: 63 RGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFA 122 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + E + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP Sbjct: 123 SPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++A+ DT+S+PDLVDY+IPGNDD+ RSI L+ S A+D I Sbjct: 183 VIALADTDSDPDLVDYIIPGNDDAIRSI----QLILSRAVDLI 221 >gi|257458511|ref|ZP_05623648.1| ribosomal protein S2 [Treponema vincentii ATCC 35580] gi|257444108|gb|EEV19214.1| ribosomal protein S2 [Treponema vincentii ATCC 35580] Length = 294 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 157/223 (70%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + T A G Sbjct: 5 TMKNLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDAVRKTTAAG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK Q + + A+R + VN++WLGGM+TN+ T+ +S+ +L+ +E++ E Sbjct: 65 KSVLFVGTKKQVQQTIAKEAERCGMFYVNNRWLGGMLTNFSTIKKSLARLKKIEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE +++++ KL++ L GI++M LP ++F++DT +E +AI EARR+ I Sbjct: 122 NDGTFDSLTKKEVAVLQKEKAKLEKNLGGIKEMKELPGIIFIIDTRKETIAISEARRMGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVAVVDTN NP+ +DY IPGNDD+ RSI+LF ++A+A I+ Sbjct: 182 PIVAVVDTNCNPEGIDYPIPGNDDAIRSISLFTQIIANAVIEA 224 >gi|291614114|ref|YP_003524271.1| ribosomal protein S2 [Sideroxydans lithotrophicus ES-1] gi|291584226|gb|ADE11884.1| ribosomal protein S2 [Sideroxydans lithotrophicus ES-1] Length = 240 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 153/222 (68%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L +TV M AL+ + A Sbjct: 2 QVTMRQMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIVNLEKTVVMFNDALKEVRKIAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + G ILFVATK QA + + E A+R V+ +WLGGM+TN+KTV SI++LR+LE ++ Sbjct: 62 KKGTILFVATKRQAREIIREEAQRCGSPFVDHRWLGGMLTNFKTVQTSIKRLRELETMIE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L + R+ +KL R+L GI+D+ GLP +FV+D +K + EA++L IP Sbjct: 122 DGSIEKVSKKEGLVLRRELEKLDRSLGGIKDLQGLPSAIFVIDVGYQKGTVTEAQKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ VVDTN +P VDYVIPGNDDSS++I L+ VA A ++G Sbjct: 182 VIGVVDTNHSPLGVDYVIPGNDDSSQAIRLYARGVADAILEG 223 >gi|167032159|ref|YP_001667390.1| 30S ribosomal protein S2 [Pseudomonas putida GB-1] gi|189045003|sp|B0KS99|RS2_PSEPG RecName: Full=30S ribosomal protein S2 gi|166858647|gb|ABY97054.1| ribosomal protein S2 [Pseudomonas putida GB-1] Length = 245 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 149/226 (65%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALAFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +I+FV TK A V E A R+ V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKIMFVGTKRSAGKIVAEQAARAGSPYVDHRWLGGMLTNYKTIRASIKRLRDLET- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 120 -QAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAIIRG 224 >gi|225181368|ref|ZP_03734812.1| ribosomal protein S2 [Dethiobacter alkaliphilus AHT 1] gi|225167949|gb|EEG76756.1| ribosomal protein S2 [Dethiobacter alkaliphilus AHT 1] Length = 251 Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 156/235 (66%), Gaps = 7/235 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ + + Sbjct: 1 MPVVSMKQLLEAGVHFGHQTRRWNPKMKTYIFTERNGIYIIDLQKTVRMIDDCYNFVKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+I+FV TK QA + + A+R + VN +WLGGM+TN+KT+ + +L +LE++ Sbjct: 61 AADGGKIMFVGTKKQAQESIQTEAERCGMFYVNQRWLGGMLTNFKTIRNRVNRLIELEKM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE + + + DKL + L G+R+M LPD +F+VD +EK+A+ EAR Sbjct: 121 ---EEDGVFEVLPKKEVIKLRHEYDKLNKFLSGVRNMKSLPDALFIVDPRKEKIAVAEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +L IPIVA+VDTN +PD +DY+IPGNDD+ R++ L +A A ++G+ + ++ Sbjct: 178 KLGIPIVAIVDTNCDPDEIDYIIPGNDDAIRAVKLISGRMADAVLEGLEGRQDHV 232 >gi|257470866|ref|ZP_05634956.1| 30S ribosomal protein S2 [Fusobacterium ulcerans ATCC 49185] gi|317065068|ref|ZP_07929553.1| SSU ribosomal protein S2P [Fusobacterium ulcerans ATCC 49185] gi|313690744|gb|EFS27579.1| SSU ribosomal protein S2P [Fusobacterium ulcerans ATCC 49185] Length = 247 Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 151/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A VI + Sbjct: 4 ITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYAVIREIAEN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-- 123 GG++LFV TK QA + V E A+RS Y VN++WLGGM+TN+ T+ I++L++LE++ Sbjct: 64 GGKVLFVGTKKQAQEAVKEQAERSGMYYVNNRWLGGMLTNFATIKTRIERLKELEKMEAD 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +TKKE N ++ KL + L GI+DM +P +F+VD +E LAI EA L IP Sbjct: 124 GTLDTAYTKKEAANFRKELVKLSKNLSGIKDMKDVPQAIFIVDCKKETLAIVEAANLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A++DTN +PDLV Y IP NDD+ RS+ L ++A+A I+G Sbjct: 184 VFAMIDTNVDPDLVTYPIPANDDAIRSVKLISSVIANAIIEG 225 >gi|148284632|ref|YP_001248722.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Boryong] gi|146740071|emb|CAM80204.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Boryong] Length = 308 Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 110/238 (46%), Positives = 158/238 (66%), Gaps = 4/238 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 L TI +LL++G+ +GH+ WNPKM YI+ +R++ HII+L TV + +VI Sbjct: 25 TLSSVTISELLDAGIHYGHKASRWNPKMAPYIYGKRDDVHIINLDYTVSQIDVISKVIYK 84 Query: 62 TVA-RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + GRILFV T+ D V + A+ QY V +WLGGM+TNW TVS++I KL LE Sbjct: 85 EIKEKNGRILFVDTRRH-RDIVAQYAENCGQYYVTHRWLGGMLTNWVTVSKAINKLDQLE 143 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + L + G+TK+E L+++R RD L R+ GIR+MGG P L+ V+D N++ +A++EAR Sbjct: 144 KKLADPEKIVGYTKREILSMQRMRDNLHRSFGGIRNMGGKPTLLIVMDINKDHIAVKEAR 203 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 R +IPI+A+VDTNS+PDLVDY IPGNDD+ RSI L+C + + A + I + G D Sbjct: 204 REKIPIIAIVDTNSDPDLVDYPIPGNDDAIRSIRLYCKIFSDAVLLAIEHMLAASGVD 261 >gi|229013010|ref|ZP_04170175.1| 30S ribosomal protein S2 [Bacillus mycoides DSM 2048] gi|228748264|gb|EEL98124.1| 30S ribosomal protein S2 [Bacillus mycoides DSM 2048] Length = 233 Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 64 GGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILE 223 >gi|330959199|gb|EGH59459.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 247 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 151/226 (66%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++G FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGCHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|229174493|ref|ZP_04302025.1| 30S ribosomal protein S2 [Bacillus cereus MM3] gi|228609053|gb|EEK66343.1| 30S ribosomal protein S2 [Bacillus cereus MM3] Length = 228 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 157/221 (71%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E++ +E+ Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIEKM--QED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI Sbjct: 119 GTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 179 IGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 219 >gi|77164326|ref|YP_342851.1| ribosomal protein S2 [Nitrosococcus oceani ATCC 19707] gi|254434810|ref|ZP_05048318.1| ribosomal protein S2 [Nitrosococcus oceani AFC27] gi|123594763|sp|Q3JCX5|RS2_NITOC RecName: Full=30S ribosomal protein S2 gi|76882640|gb|ABA57321.1| SSU ribosomal protein S2P [Nitrosococcus oceani ATCC 19707] gi|207091143|gb|EDZ68414.1| ribosomal protein S2 [Nitrosococcus oceani AFC27] Length = 269 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM YIF +RNN HII+L +T+P+ +A + Sbjct: 1 MANVTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYMEATNYLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK A + V E A R VNS+WLGGM+TN++TV +SI++L DLE + Sbjct: 61 AANKGTVLFVGTKRAAQEPVREEAGRCGMPYVNSRWLGGMLTNFQTVRRSIKRLHDLEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K+E L + R RDKL+ L GI++M LPD +FV+D E++A+ EA +L Sbjct: 121 IQDGSLDRLKKREALTVRRDRDKLENNLGGIKNMTHLPDALFVIDVEHERIAVDEAAKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VAVVDTNS+P DY+IPGNDD+ R+I L+ +A IDG Sbjct: 181 IPVVAVVDTNSDPRKADYIIPGNDDAIRAIRLYLRGIADGIIDG 224 >gi|16800835|ref|NP_471103.1| 30S ribosomal protein S2 [Listeria innocua Clip11262] gi|116873091|ref|YP_849872.1| 30S ribosomal protein S2 [Listeria welshimeri serovar 6b str. SLCC5334] gi|25009214|sp|Q92B01|RS2_LISIN RecName: Full=30S ribosomal protein S2 gi|123458516|sp|A0AJB1|RS2_LISW6 RecName: Full=30S ribosomal protein S2 gi|16414254|emb|CAC96998.1| 30S ribosomal protein S2 [Listeria innocua Clip11262] gi|116741969|emb|CAK21093.1| 30S ribosomal protein S2 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 249 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 156/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E++ Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|253581355|ref|ZP_04858581.1| SSU ribosomal protein S2P [Fusobacterium varium ATCC 27725] gi|251836719|gb|EES65253.1| SSU ribosomal protein S2P [Fusobacterium varium ATCC 27725] Length = 247 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 151/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A VI + Sbjct: 4 ITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYAVIREIAEN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-- 123 GG++LFV TK QA + V E A+RS Y VN++WLGGM+TN+ T+ I++L++LE++ Sbjct: 64 GGKVLFVGTKKQAQEAVKEQAERSGMYYVNNRWLGGMLTNFATIKTRIERLKELEKMEAD 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +TKKE N ++ KL + L GI+DM +P +F+VD +E LAI EA L IP Sbjct: 124 GTLDTAYTKKEAANFRKELVKLSKNLSGIKDMKEVPQAIFIVDCKKETLAIVEAANLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A++DTN +PDLV Y IP NDD+ RS+ L ++A+A I+G Sbjct: 184 VFAMIDTNVDPDLVTYPIPANDDAIRSVKLISSVIANAIIEG 225 >gi|260654915|ref|ZP_05860403.1| ribosomal protein S2 [Jonquetella anthropi E3_33 E1] gi|260630417|gb|EEX48611.1| ribosomal protein S2 [Jonquetella anthropi E3_33 E1] Length = 272 Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 111/264 (42%), Positives = 172/264 (65%), Gaps = 13/264 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L+KA + Sbjct: 5 SMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVKGLEKAYDFVRSVGQDD 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A+RS QY +N +WLGG++TN++T+ + +Q++ +L+++ + Sbjct: 65 GTLLFVGTKRQAQDTIAEEAQRSGQYYINQRWLGGLLTNFQTLRKRVQRMIELQKIDADD 124 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G TKKE + +++ KL++ L GIRDM LPD +FV+D RE +A+ EAR+L IP++ Sbjct: 125 DWGEHTKKEISLLRKEKAKLEKYLQGIRDMKKLPDALFVIDPRREDIAVLEARKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 ++VDTN +P+++D+ IPGNDD+ R+I L L+A+A I+G + + V Sbjct: 185 SIVDTNCDPEMIDFPIPGNDDAIRAIKLITGLMANAMIEG------------RGGVDAAV 232 Query: 246 HSKEGMQLEEDSQSSESSVLDGQE 269 K + EE+ +S+ VLD +E Sbjct: 233 ERKPEVAEEENELASDEDVLDMKE 256 >gi|319940994|ref|ZP_08015331.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 3_1_45B] gi|319805567|gb|EFW02362.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 3_1_45B] Length = 255 Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 159/237 (67%), Gaps = 3/237 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+G FGH+ WNPKM +YIF RN HII+L +TV M +A++ ++G Sbjct: 3 SMREMLEAGCHFGHQTRFWNPKMAQYIFGSRNKIHIINLEKTVVMFDEAVKFARQLASQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GRILFV TK + V + A+R+ V+ +WLGG +TN+KTV +I++L+D+EE L Sbjct: 63 GRILFVDTKRGGREIVAQEAQRAGCCWVDQRWLGGTLTNFKTVRGTIKRLKDMEEQLEDG 122 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L+ +R +KL +++ GI+D+ GLPD +F+VD K+A+QEA +L IP++ Sbjct: 123 TAAKLTKKEALDFQRHVEKLNKSIGGIKDLNGLPDALFIVDVGYHKIAVQEANKLGIPVI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 VVDTN +PD +DYVIPGNDDSS+++ ++ +A A I G R S + A+ + A + Sbjct: 183 GVVDTNGSPDGIDYVIPGNDDSSKAVQIYAAGIADAVIAG--RADSAVAAEGEKAAD 237 >gi|171463271|ref|YP_001797384.1| ribosomal protein S2 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|229470517|sp|B1XTU3|RS2_POLNS RecName: Full=30S ribosomal protein S2 gi|171192809|gb|ACB43770.1| ribosomal protein S2 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 249 Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 155/224 (69%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+G FGH+ W+PKM +IF RN HII+L +T+PM Q AL+ A Sbjct: 4 TMRQMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFTKQVAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ ++S+WLGG +TN+KTV S+++L+D+E + KE Sbjct: 64 GTILFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDME--VAKE 121 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++KE L +R DKL++AL GI+D+ G+PD +FVVD K+AI EA +L IP Sbjct: 122 AGDWEKLSRKEALTNDRDLDKLQKALGGIKDLNGIPDAIFVVDVGYHKIAITEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++AVVDTN +P+ VDY+IPGNDDSS+++ L+ +A+A ++G A Sbjct: 182 VIAVVDTNHSPEGVDYIIPGNDDSSKAVILYAHGIANAILEGKA 225 >gi|330504244|ref|YP_004381113.1| 30S ribosomal protein S2 [Pseudomonas mendocina NK-01] gi|328918530|gb|AEB59361.1| 30S ribosomal protein S2 [Pseudomonas mendocina NK-01] Length = 246 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGSPFVDHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ +VDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGIVDTNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRG 224 >gi|297530576|ref|YP_003671851.1| ribosomal protein S2 [Geobacillus sp. C56-T3] gi|319766264|ref|YP_004131765.1| ribosomal protein S2 [Geobacillus sp. Y412MC52] gi|297253828|gb|ADI27274.1| ribosomal protein S2 [Geobacillus sp. C56-T3] gi|317111130|gb|ADU93622.1| ribosomal protein S2 [Geobacillus sp. Y412MC52] Length = 235 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 161/235 (68%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 64 GGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|303240829|ref|ZP_07327342.1| ribosomal protein S2 [Acetivibrio cellulolyticus CD2] gi|302591717|gb|EFL61452.1| ribosomal protein S2 [Acetivibrio cellulolyticus CD2] Length = 251 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVEEAYYFIREVAMN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A+RS QY VN++WLGGM+TN+KT+ I +L++LE + Sbjct: 64 GQGVLFVGTKKQAQDSIKEEAERSDQYFVNARWLGGMLTNFKTIKTRINRLKELERM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++ + +KL++ L GI++M GLP +F+VD +E+ AI EAR L Sbjct: 121 ETEGIFDVLPKKEVIKLKGEMEKLEKYLGGIKNMKGLPGALFIVDPRKERNAILEARNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLIAAKMADAIIEG 224 >gi|317121840|ref|YP_004101843.1| 30S ribosomal protein S2P [Thermaerobacter marianensis DSM 12885] gi|315591820|gb|ADU51116.1| SSU ribosomal protein S2P [Thermaerobacter marianensis DSM 12885] Length = 233 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 104/227 (45%), Positives = 155/227 (68%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +L +A + + Sbjct: 1 MPVVAMKQLLEAGVHFGHQTRRWNPKMRPYIFMERNGIYIIDLQKTVRLLDEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GGR+LFV TK QA + + E A R ++ +N +WLGG +TN+ T+ I +L +LE++ Sbjct: 61 VAQGGRVLFVGTKKQAREAIAEEATRCGEFYINERWLGGTLTNFSTIRTRIDRLAELEQM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E +G KKE + R+++KL++ L GI+ M LPD ++VVD +EK+A+ EAR Sbjct: 121 ---EAEGHFERLPKKEVARLVREKEKLEKYLGGIKGMKDLPDAVYVVDPRKEKIAVTEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IP+VA+VDTN +P+ +DYVIPGNDD+ R++ L +A A ++G Sbjct: 178 KLGIPVVAIVDTNCDPEEIDYVIPGNDDAIRAVRLITGKIADAVLEG 224 >gi|238926715|ref|ZP_04658475.1| ribosomal protein S2 [Selenomonas flueggei ATCC 43531] gi|238885247|gb|EEQ48885.1| ribosomal protein S2 [Selenomonas flueggei ATCC 43531] Length = 234 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 152/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLRSVAQE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LF+ TK QA + + E A R+ + VN +WLGGMMTN++T+ + I +L+ LEE+ + Sbjct: 64 GKSVLFIGTKKQAQEAIREEALRANMFYVNERWLGGMMTNFQTIQRRIHRLKTLEEM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F TKKE + +++KL+R L GI++M LP +FVVD +E++A+ EAR+L I Sbjct: 122 ENGTFEVLTKKEVQGLRHEKEKLERYLGGIKEMNRLPGALFVVDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEG 224 >gi|262039417|ref|ZP_06012724.1| ribosomal protein S2 [Leptotrichia goodfellowii F0264] gi|261746553|gb|EEY34085.1| ribosomal protein S2 [Leptotrichia goodfellowii F0264] Length = 264 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 103/262 (39%), Positives = 171/262 (65%), Gaps = 4/262 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ +KA + + + G Sbjct: 5 TMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLAATEKAYEFVREISENG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G++LFV TK QA D + E A+R+ + VN +WLGG++TN T+ +++L++LEE+ Sbjct: 65 GKVLFVGTKKQAQDAIREEAERAGGFYVNHRWLGGLLTNLNTIKTRVKRLKELEEMDADG 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +TKKE + ++ KL + + GI++M LP +FVVD +E LA++EA++L IP+ Sbjct: 125 TLDTAYTKKEAGLLRKEMAKLSKNIGGIKNMSKLPAALFVVDIKKEFLALEEAKKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A++DTN +PDLV Y IP NDD+ RS+ LF ++A+AA++G ++ + + E V Sbjct: 185 IALIDTNVDPDLVTYKIPANDDAIRSVKLFAQVIANAAVEGNGGVEGFV--EEEDGSEEV 242 Query: 245 VHSKEGMQLEEDSQSSESSVLD 266 + + ++ E+++ + E + ++ Sbjct: 243 LQETDVVEFEDEAVTEEEAEIN 264 >gi|261419449|ref|YP_003253131.1| 30S ribosomal protein S2 [Geobacillus sp. Y412MC61] gi|261375906|gb|ACX78649.1| ribosomal protein S2 [Geobacillus sp. Y412MC61] Length = 235 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 161/235 (68%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVEKVEEAYNFVRELAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 64 GGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|66044591|ref|YP_234432.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae B728a] gi|289675257|ref|ZP_06496147.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae FF5] gi|302187898|ref|ZP_07264571.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae 642] gi|81308450|sp|Q4ZWS8|RS2_PSEU2 RecName: Full=30S ribosomal protein S2 gi|63255298|gb|AAY36394.1| Ribosomal protein S2, bacterial and organelle form [Pseudomonas syringae pv. syringae B728a] gi|330896058|gb|EGH28279.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936826|gb|EGH40977.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. pisi str. 1704B] gi|330950681|gb|EGH50941.1| 30S ribosomal protein S2 [Pseudomonas syringae Cit 7] gi|330968961|gb|EGH69027.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330975401|gb|EGH75467.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 247 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 151/226 (66%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++G FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGCHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 VQAEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|289434942|ref|YP_003464814.1| 30S ribosomal protein S2 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171186|emb|CBH27728.1| 30S ribosomal protein S2 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313632964|gb|EFR99893.1| ribosomal protein S2 [Listeria seeligeri FSL N1-067] gi|313637578|gb|EFS02986.1| ribosomal protein S2 [Listeria seeligeri FSL S4-171] Length = 249 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 156/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E++ Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|270290324|ref|ZP_06196549.1| 30S ribosomal protein S2 [Pediococcus acidilactici 7_4] gi|270281105|gb|EFA26938.1| 30S ribosomal protein S2 [Pediococcus acidilactici 7_4] Length = 261 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 156/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV ++ A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDVAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + E AKR+ Q+ VN +WLGG +TNW T+ + I++L+DL+++ + Sbjct: 64 DGVVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + +++DKL++ L GI DM +PD++FVVD +E++AI+EA++L I Sbjct: 122 EDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFVVDPRKEQIAIKEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD VD +IP NDD+ R+I L +A A ++G Sbjct: 182 PVVAMVDTNTDPDQVDVIIPSNDDAIRAIRLITSKMADAVVEG 224 >gi|163941565|ref|YP_001646449.1| 30S ribosomal protein S2 [Bacillus weihenstephanensis KBAB4] gi|229564293|sp|A9VT65|RS2_BACWK RecName: Full=30S ribosomal protein S2 gi|163863762|gb|ABY44821.1| ribosomal protein S2 [Bacillus weihenstephanensis KBAB4] Length = 233 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 64 GGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM GLP +F+VD +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFIVDPRKERIAVAEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILE 223 >gi|73662821|ref|YP_301602.1| 30S ribosomal protein S2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123775343|sp|Q49X41|RS2_STAS1 RecName: Full=30S ribosomal protein S2 gi|72495336|dbj|BAE18657.1| 30S ribosomal protein S2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 262 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A I Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFIKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA D V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQDSVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG 224 >gi|15646161|ref|NP_208345.1| 30S ribosomal protein S2 [Helicobacter pylori 26695] gi|2500388|sp|P56009|RS2_HELPY RecName: Full=30S ribosomal protein S2 gi|2314737|gb|AAD08594.1| ribosomal protein S2 (rps2) [Helicobacter pylori 26695] Length = 264 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|294500911|ref|YP_003564611.1| 30S ribosomal protein S2 [Bacillus megaterium QM B1551] gi|295706257|ref|YP_003599332.1| 30S ribosomal protein S2 [Bacillus megaterium DSM 319] gi|294350848|gb|ADE71177.1| 30S ribosomal protein S2 [Bacillus megaterium QM B1551] gi|294803916|gb|ADF40982.1| 30S ribosomal protein S2 [Bacillus megaterium DSM 319] Length = 239 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYKFVKELAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V E A R+ Y VN +WLGG +TN+ T+ + I++L+D+E++ +E Sbjct: 65 GTVLFVGTKKQAQDSVKEEAARAGMYFVNQRWLGGTLTNFSTIQKRIKRLKDIEKM--QE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++++ ++L++ L GI+DM LPD +F++D +E++A+ EA++L IP Sbjct: 123 DGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKQLPDALFIIDPRKERIAVAEAKKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IV +VDTN +PD +DYVIP NDD+ R++ L VA A ++ Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKVADAILEA 224 >gi|332674346|gb|AEE71163.1| 30S ribosomal protein S2 [Helicobacter pylori 83] Length = 292 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 31 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 90 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 91 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 147 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 148 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 207 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 208 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 250 >gi|26988323|ref|NP_743748.1| 30S ribosomal protein S2 [Pseudomonas putida KT2440] gi|148549392|ref|YP_001269494.1| 30S ribosomal protein S2 [Pseudomonas putida F1] gi|38258321|sp|Q88MI0|RS2_PSEPK RecName: Full=30S ribosomal protein S2 gi|166226742|sp|A5W850|RS2_PSEP1 RecName: Full=30S ribosomal protein S2 gi|24983071|gb|AAN67212.1|AE016348_4 ribosomal protein S2 [Pseudomonas putida KT2440] gi|148513450|gb|ABQ80310.1| SSU ribosomal protein S2P [Pseudomonas putida F1] gi|313500241|gb|ADR61607.1| RpsB [Pseudomonas putida BIRD-1] Length = 245 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 148/226 (65%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HI++L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIVNLEKTLPMFNDALSFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLET- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 120 -QAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRG 224 >gi|315585942|gb|ADU40323.1| 30S ribosomal protein S2 [Helicobacter pylori 35A] Length = 292 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 31 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 90 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 91 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 147 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 148 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 207 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 208 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 250 >gi|308455398|ref|XP_003090239.1| hypothetical protein CRE_23789 [Caenorhabditis remanei] gi|308265124|gb|EFP09077.1| hypothetical protein CRE_23789 [Caenorhabditis remanei] Length = 288 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 162/225 (72%), Gaps = 1/225 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TIRQLL+SGV FGH+ WNPKM+R+IF ER+ +IIDL Q++ + A + + +TVARG Sbjct: 5 TIRQLLDSGVHFGHQTRRWNPKMKRFIFTERSGIYIIDLQQSLGYIDDAYEFVKNTVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G ILFV TK QA + + E A R Q VN +WLGG++TN++TV++ ++++++LE+L Sbjct: 65 GNILFVGTKKQAQEAIAEQAARVNQPYVNQRWLGGLLTNFQTVTKRLERMKELEQLDFEG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 GFTKKE L +R+ +KL+++L GIR M P ++VVDT +E LAI EA++L IP++ Sbjct: 125 GTSGFTKKELLLKKRELEKLQKSLGGIRHMTKTPSALWVVDTKKEHLAIDEAKKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 A++DTN +PD V + IPGNDD+ RS++L ++A AA +G+ +H Sbjct: 185 AILDTNCDPDEVTFPIPGNDDAIRSVSLLTRVIADAAAEGLMERH 229 >gi|154686066|ref|YP_001421227.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens FZB42] gi|308173612|ref|YP_003920317.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens DSM 7] gi|166225239|sp|A7Z4S0|RS2_BACA2 RecName: Full=30S ribosomal protein S2 gi|154351917|gb|ABS73996.1| RpsB [Bacillus amyloliquefaciens FZB42] gi|307606476|emb|CBI42847.1| ribosomal protein S2 [Bacillus amyloliquefaciens DSM 7] gi|328553456|gb|AEB23948.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens TA208] gi|328911753|gb|AEB63349.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens LL3] Length = 246 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 156/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNLAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D V E A RS Y VN +WLGG +TN++T+ + I++L+D+E++ + Sbjct: 64 GGKILFVGTKKQAQDSVKEEAVRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + ++++ ++L++ L GI+DM LPD +F++D +E++A+ EAR+L I Sbjct: 122 ENGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKDLPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|89895292|ref|YP_518779.1| 30S ribosomal protein S2 [Desulfitobacterium hafniense Y51] gi|219669726|ref|YP_002460161.1| 30S ribosomal protein S2 [Desulfitobacterium hafniense DCB-2] gi|122997250|sp|Q24UF7|RS2_DESHY RecName: Full=30S ribosomal protein S2 gi|254764473|sp|B8FRG5|RS2_DESHD RecName: Full=30S ribosomal protein S2 gi|89334740|dbj|BAE84335.1| 30S ribosomal protein S2 [Desulfitobacterium hafniense Y51] gi|219539986|gb|ACL21725.1| ribosomal protein S2 [Desulfitobacterium hafniense DCB-2] Length = 244 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 151/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVEEAYNYVRNLAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA + V E A+R Y VN +WLGGMMTN++T+ + + +LR+LE++ Sbjct: 64 GGTVLFVGTKKQAQESVKEEAERCGMYYVNERWLGGMMTNFQTIQKRVSRLRELEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + + +KL+R L GI+ M LPD +FVVD +E++A+ EARRL Sbjct: 121 EAEGVFEVLPKKEVAALRHEMEKLERFLGGIKSMKKLPDALFVVDPRKERIAVAEARRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGRIADAIIEG 224 >gi|325479501|gb|EGC82597.1| ribosomal protein S2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 278 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++LLE+GV FGH+ WNPKM +YIF ERN +IIDL +T +++A + + D VA G Sbjct: 5 SMKKLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTAIQIEEAYKEVRDIVADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GR+LFV TK QA D + + AKR Q+ V+ +WLGGM+TN+ T+ QSI+KL+ E + +E Sbjct: 65 GRVLFVGTKKQAQDSIEQEAKRCGQFYVSHRWLGGMLTNFGTIRQSIEKLKKYEAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L +++ D+L++ L GI++M LPD++FVVD E++A+ EA+ L IP Sbjct: 123 DGTFDLLPKKEVLQYQKEMDRLEKNLGGIKEMEQLPDVLFVVDPGEEEIAVHEAKILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++A+VDTN +PD VD IPGNDD+ R++ L ++A A ++ Sbjct: 183 VIAIVDTNCDPDKVDVAIPGNDDAIRAVKLITSVMADAVVEA 224 >gi|262276527|ref|ZP_06054336.1| SSU ribosomal protein S2p (SAe) [Grimontia hollisae CIP 101886] gi|262220335|gb|EEY71651.1| SSU ribosomal protein S2p (SAe) [Grimontia hollisae CIP 101886] Length = 242 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 110/220 (50%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM L ++ R Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDVLAELTKVGERK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G++LFV TK AS+ V AA+ QY VN++WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 65 GKVLFVGTKRAASEAVKAAAESCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLETQSTDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L IP+ Sbjct: 125 TFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIKEANNLGIPVY 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTNS+PD VD+VIPGNDD+ R++ L+ + A A +G Sbjct: 185 AVVDTNSDPDGVDFVIPGNDDAIRAVQLYLNAAAQAYSEG 224 >gi|228940915|ref|ZP_04103474.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954103|ref|ZP_04116132.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960043|ref|ZP_04121707.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228973844|ref|ZP_04134420.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|229025267|ref|ZP_04181687.1| 30S ribosomal protein S2 [Bacillus cereus AH1272] gi|229031457|ref|ZP_04187457.1| 30S ribosomal protein S2 [Bacillus cereus AH1271] gi|229104389|ref|ZP_04235058.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-28] gi|229117313|ref|ZP_04246691.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-3] gi|229162763|ref|ZP_04290720.1| 30S ribosomal protein S2 [Bacillus cereus R309803] gi|228620645|gb|EEK77514.1| 30S ribosomal protein S2 [Bacillus cereus R309803] gi|228666213|gb|EEL21677.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-3] gi|228679087|gb|EEL33295.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-28] gi|228729746|gb|EEL80726.1| 30S ribosomal protein S2 [Bacillus cereus AH1271] gi|228736020|gb|EEL86595.1| 30S ribosomal protein S2 [Bacillus cereus AH1272] gi|228785869|gb|EEM33872.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228799559|gb|EEM46512.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805669|gb|EEM52259.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228818751|gb|EEM64817.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 228 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 156/221 (70%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + +E+ Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--QED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI Sbjct: 119 GTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 179 IGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 219 >gi|309389216|gb|ADO77096.1| SSU ribosomal protein S2P [Halanaerobium praevalens DSM 2228] Length = 244 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 105/219 (47%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLESGV FGH+ WNPKM++YIF ERN +IIDL QTV ++ KA + D A G Sbjct: 6 MKQLLESGVHFGHQTKRWNPKMKQYIFTERNGIYIIDLQQTVKLIDKAYNFVKDQAAEGK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 +LFV TK QA + V A + VN +WLGGM+TN+KT+ + I +L ++E++ + Sbjct: 66 NVLFVGTKRQAQETVKNEAIKCGMPYVNQRWLGGMLTNYKTIKKRIDRLEEIEQMEEEGI 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + + ++ DKL+R L GIRDM GLPDL+F+ D +E +A+ EAR+L IPIV+ Sbjct: 126 FEVLPKKEVIELNKEHDKLERFLGGIRDMNGLPDLIFITDARKEDIAVSEARKLDIPIVS 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL+DYVIPGNDD+ R++ L +++ A + G Sbjct: 186 ILDTNCDPDLIDYVIPGNDDAIRAVKLITSVISDAVLAG 224 >gi|188528330|ref|YP_001911017.1| 30S ribosomal protein S2 [Helicobacter pylori Shi470] gi|308183693|ref|YP_003927820.1| 30S ribosomal protein S2 [Helicobacter pylori PeCan4] gi|238691957|sp|B2UVV5|RS2_HELPS RecName: Full=30S ribosomal protein S2 gi|188144570|gb|ACD48987.1| 30S ribosomal protein S2 [Helicobacter pylori Shi470] gi|297380711|gb|ADI35598.1| ribosomal protein S2 [Helicobacter pylori v225d] gi|308062820|gb|ADO04708.1| 30S ribosomal protein S2 [Helicobacter pylori Cuz20] gi|308064320|gb|ADO06207.1| 30S ribosomal protein S2 [Helicobacter pylori Sat464] gi|308065878|gb|ADO07770.1| 30S ribosomal protein S2 [Helicobacter pylori PeCan4] gi|317010230|gb|ADU80810.1| 30S ribosomal protein S2 [Helicobacter pylori India7] gi|317014972|gb|ADU82408.1| 30S ribosomal protein S2 [Helicobacter pylori Gambia94/24] gi|317179738|dbj|BAJ57526.1| 30S ribosomal protein S2 [Helicobacter pylori F30] Length = 264 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|15612510|ref|NP_224163.1| 30S ribosomal protein S2 [Helicobacter pylori J99] gi|108563928|ref|YP_628244.1| 30S ribosomal protein S2 [Helicobacter pylori HPAG1] gi|210135717|ref|YP_002302156.1| 30S ribosomal protein S2 [Helicobacter pylori P12] gi|217032963|ref|ZP_03438437.1| hypothetical protein HPB128_182g17 [Helicobacter pylori B128] gi|254780086|ref|YP_003058193.1| 30S ribosomal protein S2 [Helicobacter pylori B38] gi|298737173|ref|YP_003729703.1| 30S ribosomal protein S2 [Helicobacter pylori B8] gi|308185341|ref|YP_003929474.1| 30S ribosomal protein S2 [Helicobacter pylori SJM180] gi|7388169|sp|Q9ZJ70|RS2_HELPJ RecName: Full=30S ribosomal protein S2 gi|123246861|sp|Q1CR52|RS2_HELPH RecName: Full=30S ribosomal protein S2 gi|238058197|sp|B6JP48|RS2_HELP2 RecName: Full=30S ribosomal protein S2 gi|4156073|gb|AAD07028.1| 30S RIBOSOMAL PROTEIN S2 [Helicobacter pylori J99] gi|107837701|gb|ABF85570.1| ribosomal protein S2 [Helicobacter pylori HPAG1] gi|210133685|gb|ACJ08676.1| 30S ribosomal protein S2 [Helicobacter pylori P12] gi|216945332|gb|EEC24006.1| hypothetical protein HPB128_182g17 [Helicobacter pylori B128] gi|254001999|emb|CAX30258.1| 30S ribosomal subunit protein S2 [Helicobacter pylori B38] gi|298356367|emb|CBI67239.1| small subunit ribosomal protein S2 [Helicobacter pylori B8] gi|307638219|gb|ADN80669.1| SSU ribosomal protein S2p [Helicobacter pylori 908] gi|308061261|gb|ADO03157.1| 30S ribosomal protein S2 [Helicobacter pylori SJM180] gi|317011771|gb|ADU85518.1| 30S ribosomal protein S2 [Helicobacter pylori SouthAfrica7] gi|317013351|gb|ADU83959.1| 30S ribosomal protein S2 [Helicobacter pylori Lithuania75] gi|325996813|gb|ADZ52218.1| 30S ribosomal protein S2 [Helicobacter pylori 2018] gi|325998405|gb|ADZ50613.1| 30S ribosomal protein S2 [Helicobacter pylori 2017] Length = 264 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|15616847|ref|NP_240060.1| 30S ribosomal protein S2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681601|ref|YP_002467987.1| 30S ribosomal protein S2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682158|ref|YP_002468542.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471287|ref|ZP_05635286.1| 30S ribosomal protein S2 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387053|sp|P57325|RS2_BUCAI RecName: Full=30S ribosomal protein S2 gi|254764462|sp|B8D928|RS2_BUCA5 RecName: Full=30S ribosomal protein S2 gi|254764463|sp|B8D7D2|RS2_BUCAT RecName: Full=30S ribosomal protein S2 gi|25294447|pir||B84957 30S ribosomal protein S2 [imported] - Buchnera sp. (strain APS) gi|10038911|dbj|BAB12946.1| 30S ribosomal protein S2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621891|gb|ACL30047.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624444|gb|ACL30599.1| 30S ribosomal protein S2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085972|gb|ADP66054.1| 30S ribosomal protein S2 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086546|gb|ADP66627.1| 30S ribosomal protein S2 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087667|gb|ADP67746.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 244 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 114/237 (48%), Positives = 156/237 (65%), Gaps = 4/237 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL + + Sbjct: 5 SMREMLKAGVHFGHQTRYWNPKMKPFIFGIRNRVHIINLEKTLPMFHFALSELKKIALKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 GRILFV TK AS + E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE E + Sbjct: 65 GRILFVGTKKAASKGIKEVAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIESKDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI EA L IP+ Sbjct: 125 TFSKLTKKEALIRSRELFKLENSLGGIKNMGGLPDCLFVIDAAHENIAITEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY--MGADTKSA 240 ++VDTNSNPD VDY+IPGNDD+ RS+ L+ + I I Q+S + DTK++ Sbjct: 185 SIVDTNSNPDGVDYIIPGNDDAIRSVNLYLKSIM-LTISKINNQNSLDKVFIDTKNS 240 >gi|270160171|ref|ZP_06188827.1| ribosomal protein S2 [Legionella longbeachae D-4968] gi|289165056|ref|YP_003455194.1| 30S ribosomal protein S2 [Legionella longbeachae NSW150] gi|269988510|gb|EEZ94765.1| ribosomal protein S2 [Legionella longbeachae D-4968] gi|288858229|emb|CBJ12097.1| 30S ribosomal protein S2 [Legionella longbeachae NSW150] Length = 253 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 109/237 (45%), Positives = 157/237 (66%), Gaps = 7/237 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+G FGHR WNP+M YIF RN HII+L +T+ ML L + + Sbjct: 4 SMRELLEAGAHFGHRTRFWNPEMGEYIFGSRNKIHIINLEKTMVMLNDVLNYVGRLASNK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK A + + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ KE Sbjct: 64 AKILFVGTKRAAQESIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM--KE 121 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KKE L + R+ +KL+R L GI +MGGLPD +FVVD E +A++EA RLRIP Sbjct: 122 KGLFNDMIKKEALMLTRELEKLERGLGGIENMGGLPDALFVVDVGFEHIAVEEAHRLRIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 ++ +VDTN++P +DY+IPGNDDS R++ ++ VA A +D A+ + +G + +A Sbjct: 182 VIGIVDTNNSPKNIDYIIPGNDDSMRAVDIYVRCVADAILD--AKGSNTVGVGSSNA 236 >gi|317182761|dbj|BAJ60545.1| 30S ribosomal protein S2 [Helicobacter pylori F57] Length = 264 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KNIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|170723243|ref|YP_001750931.1| 30S ribosomal protein S2 [Pseudomonas putida W619] gi|229470519|sp|B1JBR0|RS2_PSEPW RecName: Full=30S ribosomal protein S2 gi|169761246|gb|ACA74562.1| ribosomal protein S2 [Pseudomonas putida W619] Length = 245 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 148/226 (65%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +I+FV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKIMFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLET- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 120 -QAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRG 224 >gi|227524385|ref|ZP_03954434.1| ribosomal protein S2 [Lactobacillus hilgardii ATCC 8290] gi|227088616|gb|EEI23928.1| ribosomal protein S2 [Lactobacillus hilgardii ATCC 8290] Length = 268 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + ++ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDVAYNFMKEEASK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E A R+ QY VN++WLGG +TNW T+ +++L+DL+++ Sbjct: 64 GAVVLFVGTKKQAQNSIAEEATRAGQYYVNNRWLGGTLTNWNTIQSRVKRLKDLKKMATD 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++RDKL+R L GI DM LPD++F+VD +E++A+ EA++L IPI Sbjct: 124 GTFDVLPKKEVSLLMKQRDKLERFLGGIEDMPKLPDVLFIVDPRKEQIAVHEAQKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D VIP NDD+ R++ L +A+A I+G Sbjct: 184 VAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSTMANAIIEG 224 >gi|16803698|ref|NP_465183.1| 30S ribosomal protein S2 [Listeria monocytogenes EGD-e] gi|46907887|ref|YP_014276.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str. F2365] gi|47093767|ref|ZP_00231516.1| ribosomal protein S2 [Listeria monocytogenes str. 4b H7858] gi|47097503|ref|ZP_00235044.1| ribosomal protein S2 [Listeria monocytogenes str. 1/2a F6854] gi|217964192|ref|YP_002349870.1| ribosomal protein S2 [Listeria monocytogenes HCC23] gi|224499239|ref|ZP_03667588.1| 30S ribosomal protein S2 [Listeria monocytogenes Finland 1988] gi|226224258|ref|YP_002758365.1| 30S ribosomal protein S2 [Listeria monocytogenes Clip81459] gi|254824281|ref|ZP_05229282.1| ribosomal protein S2 [Listeria monocytogenes FSL J1-194] gi|254829462|ref|ZP_05234149.1| ribosomal protein S2 [Listeria monocytogenes FSL N3-165] gi|254832061|ref|ZP_05236716.1| 30S ribosomal protein S2 [Listeria monocytogenes 10403S] gi|254852282|ref|ZP_05241630.1| ribosomal protein S2 [Listeria monocytogenes FSL R2-503] gi|254898175|ref|ZP_05258099.1| 30S ribosomal protein S2 [Listeria monocytogenes J0161] gi|254912332|ref|ZP_05262344.1| 30S ribosomal protein S2 [Listeria monocytogenes J2818] gi|254931598|ref|ZP_05264957.1| ribosomal protein S2 [Listeria monocytogenes HPB2262] gi|254936659|ref|ZP_05268356.1| ribosomal protein S2 [Listeria monocytogenes F6900] gi|284802050|ref|YP_003413915.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5578] gi|284995192|ref|YP_003416960.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5923] gi|290893249|ref|ZP_06556236.1| ribosomal protein S2 [Listeria monocytogenes FSL J2-071] gi|300766500|ref|ZP_07076449.1| ribosomal protein S2 [Listeria monocytogenes FSL N1-017] gi|315282614|ref|ZP_07870985.1| ribosomal protein S2 [Listeria marthii FSL S4-120] gi|25009209|sp|Q8Y6M6|RS2_LISMO RecName: Full=30S ribosomal protein S2 gi|61215604|sp|Q71Z11|RS2_LISMF RecName: Full=30S ribosomal protein S2 gi|254764481|sp|B8DFR3|RS2_LISMH RecName: Full=30S ribosomal protein S2 gi|259495218|sp|C1KVV4|RS2_LISMC RecName: Full=30S ribosomal protein S2 gi|16411094|emb|CAC99736.1| 30S ribosomal protein S2 [Listeria monocytogenes EGD-e] gi|46881156|gb|AAT04453.1| ribosomal protein S2 [Listeria monocytogenes serotype 4b str. F2365] gi|47014118|gb|EAL05110.1| ribosomal protein S2 [Listeria monocytogenes str. 1/2a F6854] gi|47017854|gb|EAL08638.1| ribosomal protein S2 [Listeria monocytogenes str. 4b H7858] gi|217333462|gb|ACK39256.1| ribosomal protein S2 [Listeria monocytogenes HCC23] gi|225876720|emb|CAS05429.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601877|gb|EEW15202.1| ribosomal protein S2 [Listeria monocytogenes FSL N3-165] gi|258605588|gb|EEW18196.1| ribosomal protein S2 [Listeria monocytogenes FSL R2-503] gi|258609255|gb|EEW21863.1| ribosomal protein S2 [Listeria monocytogenes F6900] gi|284057612|gb|ADB68553.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5578] gi|284060659|gb|ADB71598.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5923] gi|290557231|gb|EFD90758.1| ribosomal protein S2 [Listeria monocytogenes FSL J2-071] gi|293583152|gb|EFF95184.1| ribosomal protein S2 [Listeria monocytogenes HPB2262] gi|293590313|gb|EFF98647.1| 30S ribosomal protein S2 [Listeria monocytogenes J2818] gi|293593516|gb|EFG01277.1| ribosomal protein S2 [Listeria monocytogenes FSL J1-194] gi|300512793|gb|EFK39891.1| ribosomal protein S2 [Listeria monocytogenes FSL N1-017] gi|307571241|emb|CAR84420.1| rpsB [Listeria monocytogenes L99] gi|313608439|gb|EFR84371.1| ribosomal protein S2 [Listeria monocytogenes FSL F2-208] gi|313613739|gb|EFR87512.1| ribosomal protein S2 [Listeria marthii FSL S4-120] gi|328465020|gb|EGF36299.1| 30S ribosomal protein S2 [Listeria monocytogenes 1816] gi|332312098|gb|EGJ25193.1| 30S ribosomal protein S2 [Listeria monocytogenes str. Scott A] Length = 249 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 155/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E + Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|194014878|ref|ZP_03053495.1| ribosomal protein S2 [Bacillus pumilus ATCC 7061] gi|194013904|gb|EDW23469.1| ribosomal protein S2 [Bacillus pumilus ATCC 7061] Length = 244 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 157/222 (70%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNLAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D V E A RS + VN +WLGG +TN++T+ + I++L+D+E++ + Sbjct: 64 GGKILFVGTKKQAQDSVKEEAIRSGMFYVNQRWLGGTLTNFETIQKRIKRLKDIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + ++++ ++L++ L GI+DM GLPD +F++D +E++A+ EAR+L I Sbjct: 122 ENGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTAKMADAILE 223 >gi|217033851|ref|ZP_03439276.1| hypothetical protein HP9810_877g55 [Helicobacter pylori 98-10] gi|216943749|gb|EEC23192.1| hypothetical protein HP9810_877g55 [Helicobacter pylori 98-10] gi|261838827|gb|ACX98593.1| ribosomal protein S2 [Helicobacter pylori 51] gi|317178259|dbj|BAJ56048.1| 30S ribosomal protein S2 [Helicobacter pylori F16] Length = 264 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|167750008|ref|ZP_02422135.1| hypothetical protein EUBSIR_00976 [Eubacterium siraeum DSM 15702] gi|167657029|gb|EDS01159.1| hypothetical protein EUBSIR_00976 [Eubacterium siraeum DSM 15702] gi|291557908|emb|CBL35025.1| SSU ribosomal protein S2P [Eubacterium siraeum V10Sc8a] Length = 245 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/227 (48%), Positives = 155/227 (68%), Gaps = 9/227 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L +A I + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLDEAYNFIHEVAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA+D + E A R+ + VN++WLGGMMTN+KT+ + I++ LE+L E Sbjct: 65 GEVLFVGTKKQAADSIKEEALRANAHYVNARWLGGMMTNFKTIEKRIKR---LEQLHTME 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G KKE + + + +KL++ L GI++M LP +FVVD +EK+A+ EA++L I Sbjct: 122 NDGTFDLLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPSALFVVDPRKEKIAVSEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 P+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ ARQ Sbjct: 182 PVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMADAIIE--ARQ 226 >gi|311087127|gb|ADP67207.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 244 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 107/209 (51%), Positives = 144/209 (68%), Gaps = 1/209 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL + + Sbjct: 5 SMREMLKAGVHFGHQTRYWNPKMKPFIFGIRNRVHIINLEKTLPMFHFALSELKKIALKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 GRILFV TK AS + E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE E + Sbjct: 65 GRILFVGTKKAASKGIKEVAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIESKDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI EA L IP+ Sbjct: 125 TFSKLTKKEALIRSRELFKLENSLGGIKNMGGLPDCLFVIDAAHENIAITEANNLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++VDTNSNPD VDY+IPGNDD+ RS+ L+ Sbjct: 185 SIVDTNSNPDGVDYIIPGNDDAIRSVNLY 213 >gi|302038066|ref|YP_003798388.1| 30S ribosomal protein S2 [Candidatus Nitrospira defluvii] gi|300606130|emb|CBK42463.1| 30S ribosomal protein S2 [Candidatus Nitrospira defluvii] Length = 257 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 105/219 (47%), Positives = 154/219 (70%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LLE+GV FGH+ WNPKM+R++F ERN +IIDL QTV ++ A DTVA G Sbjct: 6 IKELLEAGVHFGHQTNRWNPKMKRFLFGERNGVYIIDLQQTVERMELAYAFARDTVAAGD 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK QA++ + E AKR+ Q+ +N +WLGGM+TN++T+ +SI K++ +E L + Sbjct: 66 SVLFVGTKRQAAEILEEEAKRANQFYINQRWLGGMLTNFQTIRRSIDKMKKMETTLADPT 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +QG TKKE ++++ KL++ L GIR+M LP +F++DT E +AI EA RL IP++A Sbjct: 126 HQGHTKKELGQMQKEVVKLQKNLSGIRNMRALPGAVFILDTRIEHIAILEASRLEIPVIA 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VD+N +PD + Y IPGNDD+ RSI L +A A ++G Sbjct: 186 IVDSNCDPDHIQYPIPGNDDAIRSIKLIISRIADACLEG 224 >gi|152976193|ref|YP_001375710.1| 30S ribosomal protein S2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189044926|sp|A7GRF7|RS2_BACCN RecName: Full=30S ribosomal protein S2 gi|152024945|gb|ABS22715.1| ribosomal protein S2 [Bacillus cytotoxicus NVH 391-98] Length = 233 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A V+ + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFNVMRNIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 64 GGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L I Sbjct: 122 EDGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|304384857|ref|ZP_07367203.1| 30S ribosomal protein S2 [Pediococcus acidilactici DSM 20284] gi|1350975|sp|P49668|RS2_PEDAC RecName: Full=30S ribosomal protein S2 gi|897795|emb|CAA50276.1| 30S ribosomal protein [Pediococcus acidilactici] gi|304329051|gb|EFL96271.1| 30S ribosomal protein S2 [Pediococcus acidilactici DSM 20284] Length = 261 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 156/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV ++ A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDVAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + E AKR+ Q+ VN +WLGG +TNW T+ + I++L+DL+++ + Sbjct: 64 DGVVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + +++DKL++ L GI DM +PD++FVVD +E++AI+EA++L I Sbjct: 122 EDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFVVDPRKEQIAIKEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD VD +IP NDD+ R++ L +A A ++G Sbjct: 182 PVVAMVDTNTDPDQVDVIIPSNDDAIRAVRLITSKMADAVVEG 224 >gi|320547617|ref|ZP_08041902.1| 30S ribosomal protein S2 [Streptococcus equinus ATCC 9812] gi|320447692|gb|EFW88450.1| 30S ribosomal protein S2 [Streptococcus equinus ATCC 9812] Length = 285 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/253 (43%), Positives = 168/253 (66%), Gaps = 12/253 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D A Sbjct: 34 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADAAYEFVRDAAAN 93 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 94 DAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM--E 151 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M++VD ++E++A++EA++L I Sbjct: 152 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYIVDPHKEQIAVKEAKKLGI 211 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ----HSYMGADTK 238 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G RQ + GA+ K Sbjct: 212 PVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG--RQGEDADADFGAEAK 269 Query: 239 SAG-ETVVHSKEG 250 + E +V EG Sbjct: 270 ADSIEEIVEVVEG 282 >gi|317181240|dbj|BAJ59026.1| 30S ribosomal protein S2 [Helicobacter pylori F32] Length = 264 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|229824120|ref|ZP_04450189.1| hypothetical protein GCWU000282_01424 [Catonella morbi ATCC 51271] gi|229786474|gb|EEP22588.1| hypothetical protein GCWU000282_01424 [Catonella morbi ATCC 51271] Length = 249 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 156/220 (70%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ +A + + A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLVDEAYNYMREAAADGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LFV TK QA V E A RS QY +N +WLGG++TNW T+ I++L+ +E++ E+ Sbjct: 61 VVLFVGTKKQAQKAVEEHAVRSGQYYINHRWLGGLLTNWDTIQGRIRRLKAIEKM--AED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + I +++++L++ L GI+DM +PD++F+VD +E++A+QEA++L IPI Sbjct: 119 GTFEVLPKKEVIEIRKEQERLEKFLGGIKDMPRIPDVIFIVDPRKERIAVQEAQKLNIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VA+VDTN +PD +D VIP NDD+ R+I+L +A A I+ Sbjct: 179 VAMVDTNCDPDEIDVVIPSNDDAIRAISLIAGAMADAVIE 218 >gi|83589880|ref|YP_429889.1| SSU ribosomal protein S2P [Moorella thermoacetica ATCC 39073] gi|123766794|sp|Q2RJP3|RS2_MOOTA RecName: Full=30S ribosomal protein S2 gi|83572794|gb|ABC19346.1| SSU ribosomal protein S2P [Moorella thermoacetica ATCC 39073] Length = 238 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I D Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQRTVKKIEEAYNFIRDLSRD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V E A+R + VN +WLGG +TN++T+ + I++L++LE + Sbjct: 64 GGKVLFVGTKKQAQESVKEEAERCGMFYVNVRWLGGTLTNFQTIRRRIERLKELERM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE ++ +R+KL+R L GI++M LPD +F++D +E++A+ E RRL Sbjct: 121 EEEGTFDLLPKKEVAHLRGEREKLERFLGGIKEMKSLPDALFIIDPRKERIAVAEGRRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKMADAVIEG 224 >gi|237753464|ref|ZP_04583944.1| 30S ribosomal protein S2 [Helicobacter winghamensis ATCC BAA-430] gi|229375731|gb|EEO25822.1| 30S ribosomal protein S2 [Helicobacter winghamensis ATCC BAA-430] Length = 265 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 152/225 (67%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N HIIDL +T+ + ++ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI+KL +EE+ E Sbjct: 63 KTIMFVGTKKQASETLKQYAESVQAPYVNYRWLGGMLTNFSTIKKSIRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKE+L I RK++KL + L G+R + PD++FV+D +EK+A+ EARRL I Sbjct: 120 SSGQIDLLTKKEKLMILRKKEKLTQYLGGVRHLKKAPDMIFVIDAAKEKIAVAEARRLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PD+VD+ IPGNDD+ RSI LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDMVDFPIPGNDDAIRSIQLFCKEMAEAITEGRA 224 >gi|228992555|ref|ZP_04152482.1| 30S ribosomal protein S2 [Bacillus pseudomycoides DSM 12442] gi|228998603|ref|ZP_04158190.1| 30S ribosomal protein S2 [Bacillus mycoides Rock3-17] gi|229006103|ref|ZP_04163791.1| 30S ribosomal protein S2 [Bacillus mycoides Rock1-4] gi|228755179|gb|EEM04536.1| 30S ribosomal protein S2 [Bacillus mycoides Rock1-4] gi|228761071|gb|EEM10030.1| 30S ribosomal protein S2 [Bacillus mycoides Rock3-17] gi|228767189|gb|EEM15825.1| 30S ribosomal protein S2 [Bacillus pseudomycoides DSM 12442] Length = 228 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 156/221 (70%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A V+ + A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFNVMRNIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + +E+ Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--QED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI Sbjct: 119 GTFDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 179 IGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 219 >gi|324989880|gb|EGC21823.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK353] Length = 260 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + + Sbjct: 64 DAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E++ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDRTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG 224 >gi|257094444|ref|YP_003168085.1| 30S ribosomal protein S2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046968|gb|ACV36156.1| ribosomal protein S2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 247 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 107/220 (48%), Positives = 150/220 (68%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L QT+ +A+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPYIFGARNKIHIVNLEQTLAKYNEAMTFVRRLSANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV+TK QA + + E A R A V +WLGGM+TN+KT+ QSI++++D+E + + Sbjct: 64 GSILFVSTKRQAREIMAEEATRCASPYVEQRWLGGMLTNFKTIKQSIKRIKDMEAMSDDG 123 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L + R+ DK+++++ GI+DM LPD +FV+D K+AI EA +L IP+V Sbjct: 124 SLARLGKKEALMMTRELDKMQKSIGGIKDMVSLPDALFVIDVGYHKIAITEANKLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +P VDYVIPGNDDSSR+I L+ VA A ++G Sbjct: 184 AVVDTNHSPKGVDYVIPGNDDSSRAIRLYARGVADAVLEG 223 >gi|320535430|ref|ZP_08035539.1| ribosomal protein S2 [Treponema phagedenis F0421] gi|320147717|gb|EFW39224.1| ribosomal protein S2 [Treponema phagedenis F0421] Length = 292 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + T+A G Sbjct: 5 TMKNLLESGVHFGHQVRRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDAVRKTMADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + + A+R + VN++WLGGM+TN+ T+ +S+ +L+ +E++ ++ Sbjct: 65 KSVLFVGTKKQAQQTIAKEAERCGMFYVNNRWLGGMLTNFSTIKKSLGRLKRIEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE ++++++ KL++ L GI++M LP ++F++DT +E +AI EAR++ IPI+ Sbjct: 125 TFDSLTKKEIASLQKEKAKLEKNLGGIKEMKDLPGIIFIIDTRKETIAINEARKMNIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A I+ Sbjct: 185 AVVDTNCNPEGIDYPIPGNDDAIRAISLFTQIIANAVIEA 224 >gi|212704257|ref|ZP_03312385.1| hypothetical protein DESPIG_02312 [Desulfovibrio piger ATCC 29098] gi|212672337|gb|EEB32820.1| hypothetical protein DESPIG_02312 [Desulfovibrio piger ATCC 29098] Length = 253 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 1/223 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A + DTVA G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLFRVAYDKVVDTVANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G++LF+ TK QA + V A ++ QY V ++W+GG +TN+ T+ +S+++L+ LE + + Sbjct: 65 GKVLFIGTKRQAQEAVATEATKANQYYVTNRWMGGTLTNFVTIQKSVERLKKLEGMFADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L +ER+ KL++ L GI++M LP L F++D +RE +A++E R+L IPIV Sbjct: 125 SINRYQKKEILLLEREMQKLEQTLGGIKNMDRLPQLAFIIDPHREDIAVKECRKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 AV DTN +PD++DY+IPGNDD+ R+I LF + A +G A+ Sbjct: 185 AVTDTNCDPDVIDYIIPGNDDAIRAIKLFVTAFSEACQEGEAQ 227 >gi|325474922|gb|EGC78108.1| 30S ribosomal protein S2 [Treponema denticola F0402] Length = 291 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 98/219 (44%), Positives = 160/219 (73%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + + T + G Sbjct: 5 TMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKTTSEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + + A+R + VN++WLGGM+TN+ T+ +S+ +L+ +E++ ++ Sbjct: 65 KSVLFVGTKKQAQQTIQKEAERCGMFYVNNRWLGGMLTNFSTIKKSLARLKKIEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE ++++++ KL++ L GI++M LP ++F++DT +E++AI+EAR L IPI+ Sbjct: 125 TFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLGIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 AVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A I+ Sbjct: 185 AVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIE 223 >gi|212696166|ref|ZP_03304294.1| hypothetical protein ANHYDRO_00702 [Anaerococcus hydrogenalis DSM 7454] gi|212676795|gb|EEB36402.1| hypothetical protein ANHYDRO_00702 [Anaerococcus hydrogenalis DSM 7454] Length = 257 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 155/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++LLE+GV FGH+ WNPKM ++IF ERN +IIDL++T + KA +VI D + G Sbjct: 5 SMKKLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLAKTSNQIDKAYEVIKDIASEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + + AKR QY V+++WLGGM+TN+ T+ S+ KL+ E + +E Sbjct: 65 GSILFVGTKKQAQDSIEQEAKRCGQYYVSNRWLGGMLTNFNTIRNSVNKLKKYETM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L ++ DKL++ L GI++M LPD +FVVD + E++A+ EA+ L IP Sbjct: 123 DGTFDLLPKKEVLQYNKEMDKLEKNLGGIKEMEELPDALFVVDPSNEQIAVHEAKILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++VDTN +PD+VD IPGNDD+ R++ L ++A A I+G Sbjct: 183 VISIVDTNCDPDVVDIAIPGNDDAIRAVKLITSVMADAVIEG 224 >gi|125973521|ref|YP_001037431.1| SSU ribosomal protein S2P [Clostridium thermocellum ATCC 27405] gi|256003339|ref|ZP_05428330.1| ribosomal protein S2 [Clostridium thermocellum DSM 2360] gi|281417724|ref|ZP_06248744.1| ribosomal protein S2 [Clostridium thermocellum JW20] gi|166225265|sp|A3DE59|RS2_CLOTH RecName: Full=30S ribosomal protein S2 gi|125713746|gb|ABN52238.1| SSU ribosomal protein S2P [Clostridium thermocellum ATCC 27405] gi|255992629|gb|EEU02720.1| ribosomal protein S2 [Clostridium thermocellum DSM 2360] gi|281409126|gb|EFB39384.1| ribosomal protein S2 [Clostridium thermocellum JW20] gi|316940239|gb|ADU74273.1| ribosomal protein S2 [Clostridium thermocellum DSM 1313] Length = 252 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVEEAYYFLREVAMN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A+R+ QY VN++WLGGM+TN+KT+ I +L++L ++ Sbjct: 64 GQGVLFVGTKKQAQDSIREEAQRADQYYVNARWLGGMLTNFKTIKGRINRLKELTKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + +++KL++ L GI++M LP +FVVD +E++A+ EARRL Sbjct: 121 EEEGVFDVLPKKEVTKLRAEKEKLEKYLGGIKEMKELPGALFVVDPRKERIAVLEARRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLIASKMADAIIEG 224 >gi|295105545|emb|CBL03089.1| SSU ribosomal protein S2P [Faecalibacterium prausnitzii SL3/3] Length = 240 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + + A R + VN++WLGGMMTN++T+ + I ++ L ++ KE Sbjct: 65 GDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMMTNFRTIRKRIDRMDQLAKM--KE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N F KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L IP Sbjct: 123 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 183 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEG 224 >gi|118474889|ref|YP_892581.1| 30S ribosomal protein S2 [Campylobacter fetus subsp. fetus 82-40] gi|166225254|sp|A0RQU8|RS2_CAMFF RecName: Full=30S ribosomal protein S2 gi|118414115|gb|ABK82535.1| ribosomal protein S2 [Campylobacter fetus subsp. fetus 82-40] Length = 258 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 150/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A G Sbjct: 3 TMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + E Sbjct: 63 KTVLFVGTKKQAGVAIKEYAEKCGMPYVNHRWLGGMMTNFGTIKQSIRKLEVIEAM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR+M LPD++FV+DT +EK+A+ EA +LR+ Sbjct: 120 EDGSINLLTKKEALMLRRKKEKLLATLGGIRNMKSLPDMVFVIDTVKEKIAVAEANKLRM 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PD+VD+ IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPIDTNCDPDIVDFPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|56419784|ref|YP_147102.1| 30S ribosomal protein S2 [Geobacillus kaustophilus HTA426] gi|61215361|sp|Q5L0K2|RS2_GEOKA RecName: Full=30S ribosomal protein S2 gi|56379626|dbj|BAD75534.1| 30S ribosomal protein S2 [Geobacillus kaustophilus HTA426] Length = 235 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 161/235 (68%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 64 GGKILFVGTKKQAQESVKEEAERCDMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|261856050|ref|YP_003263333.1| ribosomal protein S2 [Halothiobacillus neapolitanus c2] gi|261836519|gb|ACX96286.1| ribosomal protein S2 [Halothiobacillus neapolitanus c2] Length = 244 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 148/226 (65%), Gaps = 7/226 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++RQ++E+GV FGH+ WNP M YIF +RN HII+L +TVPM AL IS Sbjct: 1 MASVSMRQMIEAGVHFGHQTRYWNPGMAPYIFGQRNRIHIINLEKTVPMFNDALNFISKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG I+FV TK A D V E A R VN +WLGGMMTN+ TV QS+++L+ L+ + Sbjct: 61 VGGGGTIMFVGTKRSARDTVAEEAARCGMPYVNHRWLGGMMTNYATVRQSVRRLKTLQTM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE L + R+R+KL+R+L GI+DM LP+ +FV+D E +A+ EA+ Sbjct: 121 ---EQDGSLAKLNKKEGLMMTREREKLERSLGGIQDMDRLPNALFVIDVGHEDIAVIEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +L IP++ +VDTNS+ +DYVIPGNDD+ R+I L+ VA ++ Sbjct: 178 KLGIPVIGIVDTNSSSKGIDYVIPGNDDAIRAIQLYAHAVAETVLE 223 >gi|189183506|ref|YP_001937291.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Ikeda] gi|189180277|dbj|BAG40057.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Ikeda] Length = 292 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 108/238 (45%), Positives = 158/238 (66%), Gaps = 4/238 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + TI +LL++G+ +GH+ WNPKM YI+ +R++ HII+L T + +VI Sbjct: 9 TISSVTISELLDAGIHYGHKASRWNPKMAPYIYGKRDDVHIINLDYTASQIDVVSKVIYK 68 Query: 62 TVA-RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + GRILFV T+ D V + A+ QY V +WLGGM+TNW TVS++I KL LE Sbjct: 69 EIKEKNGRILFVDTRRH-RDIVAQYAENCGQYYVTHRWLGGMLTNWVTVSKAINKLDQLE 127 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + L + G+TK+E L+++R RD L+R+ GIR+MGG P L+ V+D N++ +A++EAR Sbjct: 128 KKLADPEKIAGYTKREILSMQRMRDNLQRSFGGIRNMGGKPTLLIVMDINKDHIAVKEAR 187 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 R +IPI+A+VDTNS+PDLVDY IPGNDD+ RSI L+C + + A + I + G D Sbjct: 188 REKIPIIAIVDTNSDPDLVDYPIPGNDDAIRSIRLYCKIFSDAVLLAIEHMLAASGVD 245 >gi|229061430|ref|ZP_04198775.1| 30S ribosomal protein S2 [Bacillus cereus AH603] gi|229134634|ref|ZP_04263444.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST196] gi|229168566|ref|ZP_04296289.1| 30S ribosomal protein S2 [Bacillus cereus AH621] gi|228614972|gb|EEK72074.1| 30S ribosomal protein S2 [Bacillus cereus AH621] gi|228648895|gb|EEL04920.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST196] gi|228717853|gb|EEL69501.1| 30S ribosomal protein S2 [Bacillus cereus AH603] Length = 228 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 100/220 (45%), Positives = 156/220 (70%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + +E+ Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--QED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++++ ++L++ L GI+DM GLP +F+VD +E++A+ EAR+L IPI Sbjct: 119 GTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFIVDPRKERIAVAEARKLHIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 179 IGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILE 218 >gi|306834515|ref|ZP_07467628.1| 30S ribosomal protein S2 [Streptococcus bovis ATCC 700338] gi|304423317|gb|EFM26470.1| 30S ribosomal protein S2 [Streptococcus bovis ATCC 700338] Length = 285 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D A Sbjct: 34 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADVAYEFVRDAAAN 93 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 94 DAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM--E 151 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 152 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 211 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 212 PVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 254 >gi|269118719|ref|YP_003306896.1| ribosomal protein S2 [Sebaldella termitidis ATCC 33386] gi|268612597|gb|ACZ06965.1| ribosomal protein S2 [Sebaldella termitidis ATCC 33386] Length = 263 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 154/221 (69%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ +KA I D ++G Sbjct: 5 SMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLDSTEKAYNFIRDITSQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + + E A R+ + VN++WLGG++TN T+ +Q+L+DLEE+ Sbjct: 65 GKVLFVGTKKQAQEAIREEAVRAGGFYVNNRWLGGLLTNLNTIKTRVQRLKDLEEMDQNG 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ +TKKE + ++ KL + L GI++M +P +FVVD +E LA++EA++L IP+ Sbjct: 125 MLDESYTKKEAGLLRKEMAKLSKNLGGIKEMNKVPAALFVVDIKKEFLALEEAKKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA++DTN +PDLV Y IP NDD+ RS+ LF +++A+A I+G Sbjct: 185 VALIDTNVDPDLVTYKIPANDDAIRSVKLFSEIMANAIIEG 225 >gi|254467948|ref|ZP_05081354.1| ribosomal protein S2 [beta proteobacterium KB13] gi|207086758|gb|EDZ64041.1| ribosomal protein S2 [beta proteobacterium KB13] Length = 244 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKME +IF ERN HII+L +T+P+ ++A + + + A Sbjct: 4 TMRQMLEAGVHFGHQTRYWNPKMESFIFGERNKIHIINLEKTLPLFEEASKFLKNLAANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 GRILFV TK QA + V E A+R+ VN +WLGGM+TN+KTV QSI++L +LE ++ Sbjct: 64 GRILFVGTKRQAREIVKEEAERAGCPYVNHRWLGGMLTNFKTVKQSIKRLNELETMIADG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K+E L ++R +KL R++ GI++M LPD +FV+D E A++EA +L IP+V Sbjct: 124 SLDKLKKREALTVKRDHEKLVRSIGGIKEMSSLPDAIFVIDVGFESGAVEEATKLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VD+N++ + + YVIPGNDDSSR+I L+ +A A + G Sbjct: 184 GIVDSNNSIENISYVIPGNDDSSRAIRLYARGMADAVLAG 223 >gi|219847467|ref|YP_002461900.1| 30S ribosomal protein S2 [Chloroflexus aggregans DSM 9485] gi|254764466|sp|B8G458|RS2_CHLAD RecName: Full=30S ribosomal protein S2 gi|219541726|gb|ACL23464.1| ribosomal protein S2 [Chloroflexus aggregans DSM 9485] Length = 238 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 112/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%) Query: 3 LPQF-TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP+ TIR+LLE+G FGH WNPKM+ YIF RN HIIDL +TV L +A Q I++ Sbjct: 5 LPRVVTIRELLEAGAHFGHPTNRWNPKMKPYIFTARNGIHIIDLQKTVAGLSQAYQFITE 64 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 ARG +ILFV TK QA + VME A R+ Q+ +N +WLGG +TN+ T+ + ++ L DLEE Sbjct: 65 VTARGEKILFVGTKKQAQEAVMEEAIRAGQFYINRRWLGGTLTNFATMKRRLKLLSDLEE 124 Query: 122 LLNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ + TK E +E K D+L R G++ M LP +F+VD +E+LA++EA + Sbjct: 125 QRDRGDFARLTKAEAAKLEEKIDRLNRVFAGLKGMDRLPGAIFIVDPRKEELAVREADKE 184 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN +PD +DYVIP NDD+ R I L +A AAI+G+ R+ S Sbjct: 185 GIPIVAMVDTNCDPDPIDYVIPCNDDAIRGIRLMTSKIADAAIEGMRRRES 235 >gi|303232714|ref|ZP_07319399.1| ribosomal protein S2 [Atopobium vaginae PB189-T1-4] gi|302481200|gb|EFL44275.1| ribosomal protein S2 [Atopobium vaginae PB189-T1-4] Length = 258 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 109/240 (45%), Positives = 158/240 (65%), Gaps = 3/240 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G +GH+ WNPKM+ YIF +RN +I+DL QTV KA + D + Sbjct: 4 KINIRTLLEAGCHYGHQTRRWNPKMKPYIFGDRNGIYILDLKQTVLCADKAYSFLKDVAS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 + G ILFV TK QA + + E A R +N +WLGGM+TN+ T+ I ++ +LE ++ Sbjct: 64 KHGNILFVGTKKQAQEPISEQAARCNMPYINQRWLGGMLTNFVTMRSRIDRMEELEAMVE 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N KKE+ + ++ +KL+R L G+RDM LP +F+VD+ RE++AI+EARRL IP Sbjct: 124 NGVMATLPKKEQAVLTKELEKLQRNLGGVRDMHTLPQALFIVDSKREEIAIREARRLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA++DTNS+PDLVDY IP NDD+ RS++L C+LVA A + G ++ + + AGET Sbjct: 184 VVALLDTNSDPDLVDYGIPANDDAIRSVSLMCELVADAILAGSGKEQ--ISEEEMKAGET 241 >gi|261840230|gb|ACX99995.1| 30S ribosomal protein S2 [Helicobacter pylori 52] Length = 264 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 106/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ +N +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYINYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|161510961|ref|YP_089125.2| 30S ribosomal protein S2 [Mannheimia succiniciproducens MBEL55E] gi|61215477|sp|Q65R70|RS2_MANSM RecName: Full=30S ribosomal protein S2 Length = 242 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 111/228 (48%), Positives = 157/228 (68%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNGALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKILFVGTKRAATEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALVRTREMEKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ AVVDTNSNPD +D+VIPGNDD++R+I L+ A+A +G ++Q Sbjct: 181 IPVFAVVDTNSNPDGIDFVIPGNDDATRAIQLYVTAAAAAVKEGRSQQ 228 >gi|300173181|ref|YP_003772347.1| 30S ribosomal protein S2 [Leuconostoc gasicomitatum LMG 18811] gi|299887560|emb|CBL91528.1| 30S ribosomal protein S2 [Leuconostoc gasicomitatum LMG 18811] Length = 258 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 102/227 (44%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A + + Sbjct: 4 ISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFVRNASTD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 64 DANFLFVGTKKQASDAIAEEATRAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEVMAED 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + + ++R+KL + L G++DM GLPD++FVVD +E++A++EA L IP+ Sbjct: 124 GTFEQLPKKEVVLLNKQREKLDKFLGGVKDMPGLPDVLFVVDPKKEEIAVKEANMLNIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S Sbjct: 184 VAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDS 230 >gi|222110426|ref|YP_002552690.1| 30S ribosomal protein s2 [Acidovorax ebreus TPSY] gi|254764474|sp|B9MGL7|RS2_DIAST RecName: Full=30S ribosomal protein S2 gi|221729870|gb|ACM32690.1| ribosomal protein S2 [Acidovorax ebreus TPSY] Length = 250 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 152/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V E A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LESMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P+ +DYVIPGNDDS++++AL+ +A A +DG A Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILDGRA 224 >gi|330685652|gb|EGG97293.1| ribosomal protein S2 [Staphylococcus epidermidis VCU121] Length = 262 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA D V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQDSVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKTMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEG 224 >gi|239636266|ref|ZP_04677268.1| ribosomal protein S2 [Staphylococcus warneri L37603] gi|239597621|gb|EEQ80116.1| ribosomal protein S2 [Staphylococcus warneri L37603] Length = 262 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA D V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQDSVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKI--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKTMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEG 224 >gi|70726659|ref|YP_253573.1| 30S ribosomal protein S2 [Staphylococcus haemolyticus JCSC1435] gi|123734985|sp|Q4L5V8|RS2_STAHJ RecName: Full=30S ribosomal protein S2 gi|68447383|dbj|BAE04967.1| 30S ribosomal protein S2 [Staphylococcus haemolyticus JCSC1435] Length = 262 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GGR+LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGRVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEG 224 >gi|109946900|ref|YP_664128.1| 30S ribosomal protein S2 [Helicobacter acinonychis str. Sheeba] gi|122973421|sp|Q17YZ7|RS2_HELAH RecName: Full=30S ribosomal protein S2 gi|109714121|emb|CAJ99129.1| 30S ribosomal protein S2 [Helicobacter acinonychis str. Sheeba] Length = 246 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|301165589|emb|CBW25160.1| 30S ribosomal protein S2 [Bacteriovorax marinus SJ] Length = 292 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/255 (43%), Positives = 162/255 (63%), Gaps = 3/255 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + I+ LL +G FGH+ WNPKM++Y+F ERN +I+DL +T+P +KA + A Sbjct: 31 ELKIQDLLSAGAHFGHQTHKWNPKMKKYVFGERNGIYIVDLGKTIPAAKKAYDFLKKVSA 90 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +LFV TK QAS+ V AA V +WLGGM+TN+KT++ S+ KLR +E++ Sbjct: 91 EGKPVLFVGTKRQASETVRNAAISCGANHVTYRWLGGMLTNYKTITLSVDKLRKVEKMKE 150 Query: 125 KENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G TKKER IE+ KL++ L GI+DM +P +FVVD N E++A+QEA L IP Sbjct: 151 TGDFGLLTKKERSKIEKDVIKLEKNLGGIKDMRKIPGALFVVDPNAERIAVQEANVLGIP 210 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI--ARQHSYMGADTKSAG 241 +VA+ DTN +PD +DYV+PGNDD+ +S++LF D ASA +G+ A++ + D K Sbjct: 211 VVAITDTNCSPDGIDYVVPGNDDAIKSVSLFADYFASAVNEGLGQAKKTGKLSKDAKGVR 270 Query: 242 ETVVHSKEGMQLEED 256 +T + + + E D Sbjct: 271 DTSLEKEIISKYEND 285 >gi|291530477|emb|CBK96062.1| SSU ribosomal protein S2P [Eubacterium siraeum 70/3] Length = 245 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 110/227 (48%), Positives = 154/227 (67%), Gaps = 9/227 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L +A I + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLDEAYNFIHEVAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA+D + E A R+ + VN++WLGGMMTN+KT+ + I + LE+L E Sbjct: 65 GEVLFVGTKKQAADSIKEEALRANAHYVNARWLGGMMTNFKTIEKRINR---LEQLHTME 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G KKE + + + +KL++ L GI++M LP +FVVD +EK+A+ EA++L I Sbjct: 122 NDGTFDLLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPSALFVVDPRKEKIAVSEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 P+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ ARQ Sbjct: 182 PVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMADAIIE--ARQ 226 >gi|289522431|ref|ZP_06439285.1| ribosomal protein S2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504267|gb|EFD25431.1| ribosomal protein S2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 320 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 160/226 (70%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 ++L +++QLLE GV FGH+ W+PKM+ YIF ERN +IIDL +TV +++A + Sbjct: 37 ISLSVVSMKQLLECGVHFGHQTRRWDPKMKPYIFAERNGIYIIDLQKTVRAIERAYDFLR 96 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + GG +LFV TK QA + + E A+R Q+ +N +WLGG++TN+ T+S+ ++++ +L+ Sbjct: 97 EVSKGGGTVLFVGTKRQAQETIKEEAERCGQFYINQRWLGGLLTNFSTLSKRVRRMIELQ 156 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ K E Q + KKE + + +++++L++ L GIR+M LPD +FV+D RE +A+ EAR+ Sbjct: 157 EMEEKGEFQKYPKKEVIKLRKEKERLEKYLGGIRNMRDLPDALFVIDPRREYIAVAEARK 216 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IPI++VVDTN +P L+D+ IPGNDD+ R+I L L+A A I+G Sbjct: 217 LYIPIISVVDTNCDPTLIDFPIPGNDDAIRAIRLITSLMADAVIEG 262 >gi|329769641|ref|ZP_08261045.1| 30S ribosomal protein S2 [Gemella sanguinis M325] gi|328838396|gb|EGF88005.1| 30S ribosomal protein S2 [Gemella sanguinis M325] Length = 244 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 150/221 (67%), Gaps = 7/221 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + +G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSVADQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ E Sbjct: 65 GKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRIAEIEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + + ++ DKL + L GIRDM G+PD +FVVD +E AI EA++L I Sbjct: 122 ADGVFEVLPKKEVIELRKEYDKLNKFLGGIRDMKGMPDAIFVVDPKKEHNAIAEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 P+V +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 182 PVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTSKMADAFV 222 >gi|302335679|ref|YP_003800886.1| SSU ribosomal protein S2P [Olsenella uli DSM 7084] gi|301319519|gb|ADK68006.1| SSU ribosomal protein S2P [Olsenella uli DSM 7084] Length = 253 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 105/240 (43%), Positives = 157/240 (65%), Gaps = 3/240 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G +GH+ WNPKM YIF ERN +I+DL QTV KA + +T A Sbjct: 4 KINIRTLLEAGCHYGHQTRRWNPKMRPYIFGERNGIYILDLKQTVVEADKAYSFLKETAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GGR+LFV TK QA + + A R+ +N +WLGGM+TN+ T+ I ++ +LE ++ Sbjct: 64 KGGRVLFVGTKKQAQEPISAQATRAGMPYINQRWLGGMLTNFVTMRSRIDRMEELETMVE 123 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE+ + ++ +KL+R L G+RDM LP +FV+DT RE++A++EA RL IP Sbjct: 124 DGSMAARGKKEQAVLTKELEKLQRNLGGVRDMHTLPQALFVIDTKREEIAVREANRLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ ++DTNS+PD++DY IP NDD+ RS+ L C+LVA A + G ++ + + AGET Sbjct: 184 VIGLLDTNSDPDVIDYGIPANDDAIRSVNLMCELVADAVLAGSGKEQ--ISVEEMEAGET 241 >gi|269837762|ref|YP_003319990.1| 30S ribosomal protein S2 [Sphaerobacter thermophilus DSM 20745] gi|269787025|gb|ACZ39168.1| ribosomal protein S2 [Sphaerobacter thermophilus DSM 20745] Length = 269 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 110/228 (48%), Positives = 149/228 (65%), Gaps = 1/228 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM YIF ER+ HIIDL QTV +L +A D ARGG Sbjct: 1 MKALLEAGVHFGHQTKRWNPKMRPYIFTERHGIHIIDLQQTVRLLAEAQDFARDLAARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 R++FV TK QA + V AA+RS + VN +WLGG +TN+ T+ ++ L++LE + E Sbjct: 61 RVIFVGTKKQAQEAVKNAAERSGMFYVNRRWLGGTLTNFVTIRSRLRYLKELERQAAAGE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K+E + R+ +KL++ L G+RDM LP +FVVD RE +A+ EARRL IPI+A Sbjct: 121 LDTLPKQEGIRKRRELEKLRQTLGGMRDMTQLPAAIFVVDPKRESIAVAEARRLGIPIIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VDTN +PDL+DYVIP NDD+ RS+ L +A A I+G S M Sbjct: 181 MVDTNCDPDLIDYVIPANDDAIRSVRLITSRIADALIEGRTELESTMA 228 >gi|239826643|ref|YP_002949267.1| 30S ribosomal protein S2 [Geobacillus sp. WCH70] gi|259495216|sp|C5D9B5|RS2_GEOSW RecName: Full=30S ribosomal protein S2 gi|239806936|gb|ACS24001.1| ribosomal protein S2 [Geobacillus sp. WCH70] Length = 235 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 162/234 (69%), Gaps = 5/234 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKMEEAYNFVKELAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++L+++E++ Sbjct: 64 GGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLKEIEKMA-- 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I++++++L++ L GI++M LPD +FV+D +E++A+ EAR+L I Sbjct: 122 EDGTFDVLPKKEVIRIKKEQERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 PI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAVVAAE 235 >gi|42527848|ref|NP_972946.1| 30S ribosomal protein S2 [Treponema denticola ATCC 35405] gi|61215634|sp|Q73K75|RS2_TREDE RecName: Full=30S ribosomal protein S2 gi|41818676|gb|AAS12865.1| ribosomal protein S2 [Treponema denticola ATCC 35405] Length = 291 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 97/219 (44%), Positives = 160/219 (73%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + + T + G Sbjct: 5 TMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKTTSEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + + A+R + +N++WLGGM+TN+ T+ +S+ +L+ +E++ ++ Sbjct: 65 KSVLFVGTKKQAQQTIQKEAERCGMFYINNRWLGGMLTNFSTIKKSLARLKKIEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE ++++++ KL++ L GI++M LP ++F++DT +E++AI+EAR L IPI+ Sbjct: 125 TFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLGIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 AVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A I+ Sbjct: 185 AVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIE 223 >gi|172057860|ref|YP_001814320.1| 30S ribosomal protein S2 [Exiguobacterium sibiricum 255-15] gi|229470515|sp|B1YI76|RS2_EXIS2 RecName: Full=30S ribosomal protein S2 gi|171990381|gb|ACB61303.1| ribosomal protein S2 [Exiguobacterium sibiricum 255-15] Length = 244 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A I + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYNFIREVASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA D V E A R+ QY +N +WLGG +TN+ T+ + I +L+ LE++ + Sbjct: 64 GGNVLFVGTKKQAQDTVKEEAIRAGQYFINERWLGGTLTNFSTIKKRINRLKQLEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + ++++ +L++ L GI+DM G+PD +F+VD +E++AI EA +L I Sbjct: 122 ENGTFEVLPKKEVIILKKEMTRLEKFLGGIKDMPGVPDALFIVDPRKERIAIAEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PIVA+VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 182 PIVAIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILE 223 >gi|237750359|ref|ZP_04580839.1| ribosomal protein S2 [Helicobacter bilis ATCC 43879] gi|229373889|gb|EEO24280.1| ribosomal protein S2 [Helicobacter bilis ATCC 43879] Length = 268 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 106/223 (47%), Positives = 152/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+++IF R N HIIDL +T+ + ++ D + G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAASEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QASD + E A++ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KVIMFVGTKKQASDTLREYAEKVNAPYVNYRWLGGMLTNFSTIKKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKE+L + RK++KL + L GIR + PD++FVVD +EK+A+ EAR+L I Sbjct: 120 SSGQIDLLTKKEKLMLMRKKEKLNKYLGGIRHLKKAPDMLFVVDALKEKIAVGEARKLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA +DTN +PDL+DY IPGNDD+ RSI LFC ++ A +G Sbjct: 180 PVVAPLDTNCDPDLIDYPIPGNDDAIRSIQLFCKEISDAITEG 222 >gi|160945235|ref|ZP_02092461.1| hypothetical protein FAEPRAM212_02754 [Faecalibacterium prausnitzii M21/2] gi|158442966|gb|EDP19971.1| hypothetical protein FAEPRAM212_02754 [Faecalibacterium prausnitzii M21/2] Length = 259 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + A G Sbjct: 24 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAAEG 83 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + + A R + VN++WLGGMMTN++T+ + I ++ L ++ KE Sbjct: 84 GDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMMTNFRTIRKRIDRMDQLAKM--KE 141 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N F KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L IP Sbjct: 142 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 201 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 202 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEG 243 >gi|138894769|ref|YP_001125222.1| 30S ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2] gi|166225274|sp|A4IMC3|RS2_GEOTN RecName: Full=30S ribosomal protein S2 gi|134266282|gb|ABO66477.1| Ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2] Length = 235 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 160/235 (68%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 64 GGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|303258055|ref|ZP_07344063.1| ribosomal protein S2 [Burkholderiales bacterium 1_1_47] gi|302859074|gb|EFL82157.1| ribosomal protein S2 [Burkholderiales bacterium 1_1_47] Length = 249 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+G FGH+ W+PKM +YIF RN HII+L +TV +A + +++ A+ Sbjct: 2 SMRELLEAGAHFGHQTRFWSPKMSQYIFGSRNKIHIINLEKTVAKFDEAAKFLTNLAAQK 61 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-LLNK 125 G ILFV TK + D ++ AKR+ V+ +WLGGM+TN+KTV S+++L+++E+ + + Sbjct: 62 GTILFVGTKRTSRDAIVAEAKRAGMPYVDQRWLGGMLTNFKTVKVSLKRLKEMEQKVADG 121 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L+ R+ +KL +A+ GI++M GLPD + VVD K+AIQEA +L IP+V Sbjct: 122 ALEKMTKKEALDFTRELEKLNKAMGGIKEMNGLPDALVVVDVGYHKIAIQEANKLGIPVV 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN NP VDYVIPGNDDS+R++AL+ A A ++G Sbjct: 182 GIVDTNHNPAGVDYVIPGNDDSARAVALYAKGFADAILEG 221 >gi|268679047|ref|YP_003303478.1| ribosomal protein S2 [Sulfurospirillum deleyianum DSM 6946] gi|268617078|gb|ACZ11443.1| ribosomal protein S2 [Sulfurospirillum deleyianum DSM 6946] Length = 263 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 152/221 (68%), Gaps = 3/221 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+++IF ER N +I+DL +T+ + V+ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKFIFGERKNIYIVDLQKTLRYFRYTYNVVKDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QAS + E A++ VN +WLGGM+TN++T+ QSI+KL D+ E + ++ Sbjct: 63 KTMLFVGTKKQASQAIKEYAEKCGMPYVNHRWLGGMLTNYQTIRQSIRKL-DIIEKMEED 121 Query: 127 NQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 Q TKKE L + RK++KL L GIR+M LPD++FV+DT +EK+A+QEARRL I + Sbjct: 122 GQIDLLTKKEALMLRRKKEKLLDYLGGIRNMKNLPDMIFVIDTVKEKIAVQEARRLGITV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA +DTN +PD+VD IPGNDD+ RSI LFC + A +G Sbjct: 182 VAPLDTNCDPDMVDLPIPGNDDAIRSIQLFCKEMCEAMTEG 222 >gi|24380374|ref|NP_722329.1| 30S ribosomal protein S2 [Streptococcus mutans UA159] gi|290581306|ref|YP_003485698.1| 30S ribosomal protein S2 [Streptococcus mutans NN2025] gi|61215769|sp|Q8DS11|RS2_STRMU RecName: Full=30S ribosomal protein S2 gi|24378394|gb|AAN59635.1|AE015025_7 30S ribosomal protein S2 [Streptococcus mutans UA159] gi|254998205|dbj|BAH88806.1| 30S ribosomal protein S2 [Streptococcus mutans NN2025] Length = 261 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 105/249 (42%), Positives = 165/249 (66%), Gaps = 8/249 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYDFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QAS+ + E A+R+ QY +N +WLGG +TNW T+ + I +L++++++ Sbjct: 64 DAVILFVGTKKQASEAIKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKQM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L Sbjct: 121 EVDGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDIIYIVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + +A Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDSVEAVEAELAA 240 Query: 241 GETVVHSKE 249 GET S E Sbjct: 241 GETQADSIE 249 >gi|300114876|ref|YP_003761451.1| 30S ribosomal protein S2 [Nitrosococcus watsonii C-113] gi|299540813|gb|ADJ29130.1| ribosomal protein S2 [Nitrosococcus watsonii C-113] Length = 268 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM YIF +RNN HII+L +T+P+ +A + Sbjct: 1 MANVTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYIEATNYLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK A + V E A R VNS+WLGGM+TN++TV +SI++L DLE + Sbjct: 61 ATNKGTVLFVGTKRAAQEAVREEAGRCGMPYVNSRWLGGMLTNFQTVRRSIKRLHDLEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K+E L + R RDKL+ L GI++M LPD +FV+D E++A+ EA +L Sbjct: 121 IQDGSLDRLKKREALTVRRDRDKLESNLGGIKNMTHLPDALFVIDVEHERIAVDEAVKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VAVVDTNS+P DY+IPGNDD+ R+I L+ +A IDG Sbjct: 181 IPVVAVVDTNSDPRKADYIIPGNDDAIRAIRLYLRGIADGIIDG 224 >gi|126699757|ref|YP_001088654.1| 30S ribosomal protein S2 [Clostridium difficile 630] gi|254975736|ref|ZP_05272208.1| 30S ribosomal protein S2 [Clostridium difficile QCD-66c26] gi|255093123|ref|ZP_05322601.1| 30S ribosomal protein S2 [Clostridium difficile CIP 107932] gi|255101276|ref|ZP_05330253.1| 30S ribosomal protein S2 [Clostridium difficile QCD-63q42] gi|255307152|ref|ZP_05351323.1| 30S ribosomal protein S2 [Clostridium difficile ATCC 43255] gi|255314865|ref|ZP_05356448.1| 30S ribosomal protein S2 [Clostridium difficile QCD-76w55] gi|255517539|ref|ZP_05385215.1| 30S ribosomal protein S2 [Clostridium difficile QCD-97b34] gi|255650650|ref|ZP_05397552.1| 30S ribosomal protein S2 [Clostridium difficile QCD-37x79] gi|255656128|ref|ZP_05401537.1| 30S ribosomal protein S2 [Clostridium difficile QCD-23m63] gi|260683740|ref|YP_003215025.1| 30S ribosomal protein S2 [Clostridium difficile CD196] gi|260687400|ref|YP_003218534.1| 30S ribosomal protein S2 [Clostridium difficile R20291] gi|296450440|ref|ZP_06892196.1| 30S ribosomal protein S2 [Clostridium difficile NAP08] gi|296879437|ref|ZP_06903431.1| 30S ribosomal protein S2 [Clostridium difficile NAP07] gi|306520577|ref|ZP_07406924.1| 30S ribosomal protein S2 [Clostridium difficile QCD-32g58] gi|123066750|sp|Q185S8|RS2_CLOD6 RecName: Full=30S ribosomal protein S2 gi|115251194|emb|CAJ69025.1| 30S ribosomal protein S2 [Clostridium difficile] gi|260209903|emb|CBA63844.1| 30S ribosomal protein S2 [Clostridium difficile CD196] gi|260213417|emb|CBE05066.1| 30S ribosomal protein S2 [Clostridium difficile R20291] gi|296260701|gb|EFH07540.1| 30S ribosomal protein S2 [Clostridium difficile NAP08] gi|296429583|gb|EFH15436.1| 30S ribosomal protein S2 [Clostridium difficile NAP07] Length = 237 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 150/224 (66%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVEEAYKFTKEVAET 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA D + + A+R Y VN +WLGGM+TN KT+ I KLR+LE++ Sbjct: 64 GKPILFVGTKKQAQDAIKDEAERCGMYFVNERWLGGMLTNHKTIKTRINKLRELEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + + +++KL++ L GI+DM LP MFVVD +E +AIQEA RL Sbjct: 121 EEEGVFNVLPKKEVIKLRAEKEKLEKYLGGIKDMPELPGAMFVVDPRKENIAIQEAHRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V +VDTN +P+ +D+ IPGNDD+ R++ L +A+A I+G Sbjct: 181 IPVVGIVDTNCDPEQLDFAIPGNDDAIRAVKLITGAMATAVIEG 224 >gi|34811530|pdb|1PNS|B Chain B, Crystal Structure Of A Streptomycin Dependent Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pns, Contains The 30s Subunit, Two Trnas, And One Mrna Molecule. The 50s Ribosomal Subunit Is In File 1pnu. gi|34811586|pdb|1PNX|B Chain B, Crystal Structure Of The Wild Type Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx, Contains Only Molecules Of The 30s Ribosomal Subunit. The 50s Subunit Is In The Pdb File 1pny. gi|56966324|pdb|1VOQ|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966377|pdb|1VOS|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966430|pdb|1VOV|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966483|pdb|1VOX|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966536|pdb|1VOZ|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|300508606|pdb|3MR8|B Chain B, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508661|pdb|3MS0|B Chain B, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s). gi|322812551|pdb|3PYN|B Chain B, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812604|pdb|3PYQ|B Chain B, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|322812657|pdb|3PYS|B Chain B, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812710|pdb|3PYU|B Chain B, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 234 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 152/220 (69%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D RGG Sbjct: 1 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L + E Sbjct: 61 TILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP++A Sbjct: 121 IEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + DT+S+PDLVDY+IPGNDD+ RSI L+ S A+D I Sbjct: 181 LADTDSDPDLVDYIIPGNDDAIRSI----QLILSRAVDLI 216 >gi|52308040|gb|AAU38540.1| RpsB protein [Mannheimia succiniciproducens MBEL55E] Length = 256 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 111/228 (48%), Positives = 157/228 (68%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM AL ++ Sbjct: 15 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNGALAELTRI 74 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 75 ASNNGKILFVGTKRAATEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 134 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 135 SQDGTFDKLTKKEALVRTREMEKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 194 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ AVVDTNSNPD +D+VIPGNDD++R+I L+ A+A +G ++Q Sbjct: 195 IPVFAVVDTNSNPDGIDFVIPGNDDATRAIQLYVTAAAAAVKEGRSQQ 242 >gi|324992603|gb|EGC24524.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK405] gi|324995867|gb|EGC27778.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK678] gi|327460006|gb|EGF06345.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1] gi|327488596|gb|EGF20396.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1058] Length = 260 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + + Sbjct: 64 DAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG 224 >gi|125718985|ref|YP_001036118.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK36] gi|323350653|ref|ZP_08086314.1| 30S ribosomal protein S2 [Streptococcus sanguinis VMC66] gi|166226761|sp|A3CQW3|RS2_STRSV RecName: Full=30S ribosomal protein S2 gi|125498902|gb|ABN45568.1| 30S ribosomal protein S2, putative [Streptococcus sanguinis SK36] gi|322123073|gb|EFX94764.1| 30S ribosomal protein S2 [Streptococcus sanguinis VMC66] gi|325686702|gb|EGD28728.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK72] gi|325688848|gb|EGD30856.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK115] gi|325697313|gb|EGD39199.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK160] gi|327463502|gb|EGF09821.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1057] gi|327467891|gb|EGF13381.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK330] gi|327472152|gb|EGF17589.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK408] gi|328944698|gb|EGG38859.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1087] gi|332358143|gb|EGJ35975.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK49] gi|332360109|gb|EGJ37923.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1056] gi|332365234|gb|EGJ42997.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1059] gi|332365398|gb|EGJ43159.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK355] Length = 260 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + + Sbjct: 64 DAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG 224 >gi|209573709|sp|A6SZQ1|RS2_JANMA RecName: Full=30S ribosomal protein S2 Length = 248 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M Q+A++ I + Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLSSNR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A+R+ V+ +WLGGM+TN+KT+ SI++L+++E + Sbjct: 64 GTVLFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASIEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + Q +KKE L ER++ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP++ Sbjct: 124 SVQKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ V YVIPGNDDSS++I L+ VA A ++G A Sbjct: 184 GVVDTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRA 225 >gi|224510685|pdb|3FIC|B Chain B, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 30s Subunit And The Ligands Length = 235 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 152/220 (69%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D RGG Sbjct: 1 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L + E Sbjct: 61 TILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP++A Sbjct: 121 IEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + DT+S+PDLVDY+IPGNDD+ RSI L+ S A+D I Sbjct: 181 LADTDSDPDLVDYIIPGNDDAIRSI----QLILSRAVDLI 216 >gi|52080252|ref|YP_079043.1| 30S ribosomal protein S2 [Bacillus licheniformis ATCC 14580] gi|52785629|ref|YP_091458.1| 30S ribosomal protein S2 [Bacillus licheniformis ATCC 14580] gi|319645968|ref|ZP_08000198.1| 30S ribosomal protein S2 [Bacillus sp. BT1B_CT2] gi|81691069|sp|Q65JJ9|RS2_BACLD RecName: Full=30S ribosomal protein S2 gi|52003463|gb|AAU23405.1| ribosomal protein S2 [Bacillus licheniformis ATCC 14580] gi|52348131|gb|AAU40765.1| RpsB [Bacillus licheniformis ATCC 14580] gi|317391718|gb|EFV72515.1| 30S ribosomal protein S2 [Bacillus sp. BT1B_CT2] Length = 246 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 157/223 (70%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNLAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D V E A+RS Y VN +WLGG +TN++T+ + I++L+D+E++ + Sbjct: 64 GGKILFVGTKKQAQDSVKEEAERSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + ++++ ++L++ L GI++M LPD +F++D +E++A+ EAR+L I Sbjct: 122 ENGTFDVLPKKEVVQLKKELERLEKFLGGIKEMKELPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|167040298|ref|YP_001663283.1| 30S ribosomal protein S2 [Thermoanaerobacter sp. X514] gi|307724382|ref|YP_003904133.1| 30S ribosomal protein S2 [Thermoanaerobacter sp. X513] gi|326389451|ref|ZP_08211018.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus JW 200] gi|238687581|sp|B0K1P9|RS2_THEPX RecName: Full=30S ribosomal protein S2 gi|166854538|gb|ABY92947.1| ribosomal protein S2 [Thermoanaerobacter sp. X514] gi|307581443|gb|ADN54842.1| ribosomal protein S2 [Thermoanaerobacter sp. X513] gi|325994456|gb|EGD52881.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus JW 200] Length = 235 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLAMEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ +E Sbjct: 65 GTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L IP Sbjct: 123 DGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G Sbjct: 183 IVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|167037637|ref|YP_001665215.1| 30S ribosomal protein S2 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|238687715|sp|B0K9R6|RS2_THEP3 RecName: Full=30S ribosomal protein S2 gi|166856471|gb|ABY94879.1| ribosomal protein S2 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 235 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLAMEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ +E Sbjct: 65 GTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L IP Sbjct: 123 DGTFDVLPKKEVIKLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVAEARSLEIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G Sbjct: 183 IVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|289549251|ref|YP_003474239.1| ribosomal protein S2 [Thermocrinis albus DSM 14484] gi|289182868|gb|ADC90112.1| ribosomal protein S2 [Thermocrinis albus DSM 14484] Length = 278 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 104/229 (45%), Positives = 161/229 (70%), Gaps = 7/229 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+GV FGH WNPKM +++ R++ HIIDL++T+ L++A ++D+VARG Sbjct: 5 SMRELLEAGVHFGHTKSRWNPKMAPFLYGVRHDIHIIDLNKTLVYLEQAYHFVADSVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D + E A+R+ + +N +W+GG++TN++TV +SI KL+ LE + E Sbjct: 65 AEVLFVGTKKQAKDVIKEEAERAGVHYINERWVGGLLTNFRTVRKSILKLKTLERM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE ++RK ++L++ GI +M LPD+++VVDT RE +A+QEAR+L I Sbjct: 122 AEGVFDVLPKKEVRALKRKMERLRKLYGGIVNMTRLPDIIWVVDTVREHIAVQEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VA++D+N +PDLVDY +PGNDD+ +SI L +A A I+G R+ S Sbjct: 182 TVVAILDSNCDPDLVDYPVPGNDDAIKSIKLLTSKIADAIIEGKTRRES 230 >gi|257439094|ref|ZP_05614849.1| ribosomal protein S2 [Faecalibacterium prausnitzii A2-165] gi|257198472|gb|EEU96756.1| ribosomal protein S2 [Faecalibacterium prausnitzii A2-165] Length = 257 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L +A + + A G Sbjct: 23 SMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAAEG 82 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I ++ L ++ KE Sbjct: 83 GDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMDQLAKM--KE 140 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N F KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L IP Sbjct: 141 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 200 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 201 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEG 242 >gi|320116052|ref|YP_004186211.1| 30S ribosomal protein S2 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319929143|gb|ADV79828.1| ribosomal protein S2 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 261 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + G Sbjct: 31 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLAMEG 90 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ +E Sbjct: 91 GTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM--EE 148 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L IP Sbjct: 149 DGTFDVLPKKEVIKLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVAEARSLEIP 208 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G Sbjct: 209 IVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEG 250 >gi|227549017|ref|ZP_03979066.1| 30S ribosomal protein S2 [Corynebacterium lipophiloflavum DSM 44291] gi|227078927|gb|EEI16890.1| 30S ribosomal protein S2 [Corynebacterium lipophiloflavum DSM 44291] Length = 223 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 104/219 (47%), Positives = 153/219 (69%), Gaps = 2/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA G Sbjct: 5 TMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKETVAHG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + E A+R V +WLGGM+TN++TVS+ I ++++L+ + E Sbjct: 65 GTILFVGTKKQAQEPIQEEAQRVGMPYVTHRWLGGMLTNFQTVSKRIARMKELQAMDAAE 124 Query: 127 N--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G KKE L + R+R KL+R L GI DM P +++VDTN+E +AI EA++LRIP+ Sbjct: 125 EGYAGRGKKEVLMLTRERIKLERVLGGIADMTKAPSALWIVDTNKEHIAISEAQKLRIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 VAV+DTN +PD+V++ IPGNDD+ R++ L +V A + Sbjct: 185 VAVLDTNCDPDVVNFPIPGNDDAIRAVKLLTRIVGEAVV 223 >gi|104783195|ref|YP_609693.1| 30S ribosomal protein S2 [Pseudomonas entomophila L48] gi|123380812|sp|Q1I626|RS2_PSEE4 RecName: Full=30S ribosomal protein S2 gi|95112182|emb|CAK16909.1| 30S ribosomal protein S2 [Pseudomonas entomophila L48] Length = 245 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 148/226 (65%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALAFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +I+FV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKIMFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLET- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 120 -QAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ VVDTNS+P+ VD+VIPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGVVDTNSSPEGVDFVIPGNDDAIRAIELYMTSMADAVIRG 224 >gi|325695372|gb|EGD37272.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK150] Length = 260 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + + Sbjct: 64 DAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG 224 >gi|330998734|ref|ZP_08322463.1| ribosomal protein S2 [Parasutterella excrementihominis YIT 11859] gi|329576473|gb|EGG57985.1| ribosomal protein S2 [Parasutterella excrementihominis YIT 11859] Length = 247 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 102/219 (46%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R+LLE+G FGH+ W+PKM +YIF RN HII+L +TV +A + +++ A+ G Sbjct: 1 MRELLEAGAHFGHQTRFWSPKMSQYIFGSRNKIHIINLEKTVAKFDEAAKFLTNLAAQKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-LLNKE 126 ILFV TK + D ++ AKR+ V+ +WLGGM+TN+KTV S+++L+++E+ + + Sbjct: 61 TILFVGTKRTSRDAIVAEAKRAGMPYVDQRWLGGMLTNFKTVKVSLKRLKEMEQKVADGA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L+ R+ +KL +A+ GI++M GLPD + VVD K+AIQEA +L IP+V Sbjct: 121 LEKMTKKEALDFTRELEKLNKAMGGIKEMNGLPDALVVVDVGYHKIAIQEANKLGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN NP VDYVIPGNDDS+R++AL+ A A ++G Sbjct: 181 IVDTNHNPAGVDYVIPGNDDSARAVALYAKGFADAILEG 219 >gi|307264899|ref|ZP_07546461.1| ribosomal protein S2 [Thermoanaerobacter wiegelii Rt8.B1] gi|306920157|gb|EFN50369.1| ribosomal protein S2 [Thermoanaerobacter wiegelii Rt8.B1] Length = 261 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + G Sbjct: 31 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLAMEG 90 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ +E Sbjct: 91 GTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM--EE 148 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L IP Sbjct: 149 DGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEIP 208 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G Sbjct: 209 IVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEG 250 >gi|311030100|ref|ZP_07708190.1| 30S ribosomal protein S2 [Bacillus sp. m3-13] Length = 235 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFVKELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA D V E A+RS Y VN +WLGG +TN++T+ + I +L+ +E++ + Sbjct: 64 GGTVLFVGTKKQAQDSVKEEAERSGMYYVNQRWLGGTLTNFETIQKRISRLKAIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ D+L++ L GI+DM GLPD +F++D +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVMLKKELDRLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEA 224 >gi|257867706|ref|ZP_05647359.1| ribosomal protein S2 [Enterococcus casseliflavus EC30] gi|257874033|ref|ZP_05653686.1| ribosomal protein S2 [Enterococcus casseliflavus EC10] gi|325571090|ref|ZP_08146662.1| 30S ribosomal protein S2 [Enterococcus casseliflavus ATCC 12755] gi|257801789|gb|EEV30692.1| ribosomal protein S2 [Enterococcus casseliflavus EC30] gi|257808197|gb|EEV37019.1| ribosomal protein S2 [Enterococcus casseliflavus EC10] gi|325156175|gb|EGC68361.1| 30S ribosomal protein S2 [Enterococcus casseliflavus ATCC 12755] Length = 262 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + E A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ + Sbjct: 64 GGVALFVGTKKQAQEAIKEEAIRSGQYYVNHRWLGGTLTNWETIQKRVARLKQINKM--E 121 Query: 126 ENQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + ++R++L++ L GI DM +PD+M+VVD +E++AIQEAR+L I Sbjct: 122 EDGTFAVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAIQEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 224 >gi|256750772|ref|ZP_05491657.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus CCSD1] gi|300914382|ref|ZP_07131698.1| ribosomal protein S2 [Thermoanaerobacter sp. X561] gi|256750355|gb|EEU63374.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus CCSD1] gi|300889317|gb|EFK84463.1| ribosomal protein S2 [Thermoanaerobacter sp. X561] Length = 261 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + G Sbjct: 31 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLAMEG 90 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ +E Sbjct: 91 GTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM--EE 148 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L IP Sbjct: 149 DGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEIP 208 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G Sbjct: 209 IVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEG 250 >gi|224437209|ref|ZP_03658190.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818] gi|313143674|ref|ZP_07805867.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818] gi|313128705|gb|EFR46322.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818] Length = 262 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 105/225 (46%), Positives = 153/225 (68%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+R+IF R N HIIDL +T+ + ++ + + G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVKEVASEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QAS+ + A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KVIMFVGTKKQASETLKAYAESVNAPYVNYRWLGGMLTNFSTIKKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKE+L ++RK++KL + L G+R M PD++FV+D +EK+A+ EARRL I Sbjct: 120 SSGQIDLLTKKEKLMLQRKKEKLDKYLGGVRHMKKAPDMIFVIDAAKEKIAVAEARRLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PD+VDY IPGNDD+ RSI LFC ++ A ++G A Sbjct: 180 PVVAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEISEAILEGRA 224 >gi|298245136|ref|ZP_06968942.1| ribosomal protein S2 [Ktedonobacter racemifer DSM 44963] gi|297552617|gb|EFH86482.1| ribosomal protein S2 [Ktedonobacter racemifer DSM 44963] Length = 306 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+++IF +RN HIIDL QTV L +A + + A Sbjct: 5 ISMKQLLEAGVHFGHQTRRWNPKMQQFIFMDRNGIHIIDLQQTVTRLNEAYKFVEQLAAS 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA + V E AKR + +N +WLGGM+TN++T+ I+ LRDLE + Sbjct: 65 GGTLLFVGTKKQAQEAVAEEAKRCGMFYINQRWLGGMLTNFQTIQLRIKYLRDLER--RR 122 Query: 126 ENQGFTKKERLNIERKRD---KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ F + + ++R +D +L+R L GI+DM LP +F++DT +E+ A+ EA RL I Sbjct: 123 DSGEFERLPKKEVQRLQDDIARLERILGGIKDMRSLPSALFIIDTRKERTAVLEALRLEI 182 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+A+ DTN +PD +DY IP NDD+ R++ L C +A AA++G Sbjct: 183 PIIALADTNCDPDEMDYPIPANDDAIRAVRLLCAKIADAAVEG 225 >gi|295698564|ref|YP_003603219.1| ribosomal protein S2 [Candidatus Riesia pediculicola USDA] gi|291157406|gb|ADD79851.1| ribosomal protein S2 [Candidatus Riesia pediculicola USDA] Length = 243 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 112/244 (45%), Positives = 157/244 (64%), Gaps = 3/244 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 F+I +++E GV FGH+ WNPKM+ YIF +NN HIIDL +T +L+ A + I+ V Sbjct: 2 HFSISEMIECGVHFGHQRRYWNPKMKDYIFGVQNNIHIIDLEKTSLLLRSASEKINKIVE 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 R G+ILFV TK AS + E+A QY VN +WLGG +TNWKTV QSI+KL +LE ++ Sbjct: 62 RRGKILFVGTKRSASSLIKESAIYCEQYFVNKRWLGGTLTNWKTVRQSIKKLNELESQIR 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + TKKE L RK KL+ +L GI+ M LPD MF++D EK+A++EA L I Sbjct: 122 DGIFKKLTKKEALIRTRKFQKLENSLGGIKKMSMLPDAMFIIDVEHEKIAVKEANILNIQ 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 A+VDTNSNPD +D+VIPGNDDS +SI + + ++ + + ++ S D K + Sbjct: 182 TFAIVDTNSNPDGIDHVIPGNDDSIKSIKFYLEYISHSI--RMTQEKSKNNIDKKYVNDV 239 Query: 244 VVHS 247 +HS Sbjct: 240 FIHS 243 >gi|196247608|ref|ZP_03146310.1| ribosomal protein S2 [Geobacillus sp. G11MC16] gi|196212392|gb|EDY07149.1| ribosomal protein S2 [Geobacillus sp. G11MC16] Length = 235 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 155/224 (69%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 64 GGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEA 224 >gi|313113598|ref|ZP_07799186.1| ribosomal protein S2 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624113|gb|EFQ07480.1| ribosomal protein S2 [Faecalibacterium cf. prausnitzii KLE1255] Length = 240 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I ++ L ++ KE Sbjct: 65 GDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMDQLAKM--KE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N F KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L IP Sbjct: 123 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 183 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEG 224 >gi|32266571|ref|NP_860603.1| 30S ribosomal protein S2 [Helicobacter hepaticus ATCC 51449] gi|61215711|sp|Q7VH95|RS2_HELHP RecName: Full=30S ribosomal protein S2 gi|32262622|gb|AAP77669.1| ribosomal protein S2 [Helicobacter hepaticus ATCC 51449] Length = 264 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 152/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+R+IF R N HIIDL +T+ + +I + G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIIKQAASEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI++L +EE+ E Sbjct: 63 KVIMFVGTKRQASETLKQYAESVNAPYVNYRWLGGMLTNFSTIKKSIRRLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKE+L ++RK++KL + L G+R M PD++FV+D +EK+A+ EARRL I Sbjct: 120 SSGQIDLLTKKEKLMLQRKKEKLDKYLGGVRHMKKAPDMIFVIDAAKEKIAVAEARRLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA +DTN +PD+VDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PVVAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEISEAILEG 222 >gi|296127747|ref|YP_003634999.1| ribosomal protein S2 [Brachyspira murdochii DSM 12563] gi|296019563|gb|ADG72800.1| ribosomal protein S2 [Brachyspira murdochii DSM 12563] Length = 271 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 161/226 (71%), Gaps = 3/226 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP ++ LLE+GV FGH W+P+M+ +IF ERN+ +IIDL +T+ ++KA + Sbjct: 1 MSLP--VMKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAYDAVK 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + GG +LFV TK QAS + EAA++ Y VN++WLGGM+TN+ T+ +SI +L+ +E Sbjct: 59 EMARNGGNVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIE 118 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E ++ KKE + + +++++L++ GI+DM LPD++FV+D +E +A+ EAR+ Sbjct: 119 KEEVDGTFDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAIAVSEARK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+VAVVDTN NP+++D+ IPGNDD+ R+I+LF +VASA I+G Sbjct: 179 LGIPVVAVVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEG 224 >gi|320162504|ref|YP_004175729.1| 30S ribosomal protein S2 [Anaerolinea thermophila UNI-1] gi|319996358|dbj|BAJ65129.1| 30S ribosomal protein S2 [Anaerolinea thermophila UNI-1] Length = 278 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 112/223 (50%), Positives = 145/223 (65%), Gaps = 1/223 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLESGV FGHR WNP M YIF ERN HIIDL QTV L A ++ DTVA Sbjct: 5 ISMKALLESGVHFGHRTNKWNPHMRPYIFTERNGIHIIDLQQTVKALNTAYNLVRDTVAN 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA + V E A+R V +W+GG++TNW T Q IQ+L +E + + Sbjct: 65 GGTVLFVGTKRQAQETVREEAERCGMPYVVERWMGGILTNWITFYQRIQELERMERMRDS 124 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E TKKE L I+R+ D+L+ L GIR M LPDL+FVVD +RE A+ EA ++ IP+ Sbjct: 125 GELSRLTKKEGLLIQREIDRLEVRLGGIRKMKRLPDLLFVVDVDREATAVHEANKMGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +A+VDTN +P VDYVIP NDD+ R+I L +A A +G A Sbjct: 185 IALVDTNCDPRGVDYVIPSNDDAIRAIKLLVGKIADAVNEGKA 227 >gi|57238054|ref|YP_179303.1| 30S ribosomal protein S2 [Campylobacter jejuni RM1221] gi|86150711|ref|ZP_01068927.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 260.94] gi|121613320|ref|YP_001000857.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81-176] gi|148926187|ref|ZP_01809872.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8486] gi|157415446|ref|YP_001482702.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81116] gi|167005769|ref|ZP_02271527.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81-176] gi|205356206|ref|ZP_03222972.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8421] gi|315124648|ref|YP_004066652.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|81675565|sp|Q5HTT2|RS2_CAMJR RecName: Full=30S ribosomal protein S2 gi|166225257|sp|A1W0G6|RS2_CAMJJ RecName: Full=30S ribosomal protein S2 gi|172047157|sp|A8FMN8|RS2_CAMJ8 RecName: Full=30S ribosomal protein S2 gi|57166858|gb|AAW35637.1| ribosomal protein S2 [Campylobacter jejuni RM1221] gi|85841881|gb|EAQ59127.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 260.94] gi|87249309|gb|EAQ72270.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81-176] gi|145845358|gb|EDK22451.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8486] gi|157386410|gb|ABV52725.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81116] gi|205345811|gb|EDZ32448.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8421] gi|284926406|gb|ADC28758.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni IA3902] gi|307748088|gb|ADN91358.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni M1] gi|315018370|gb|ADT66463.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058614|gb|ADT72943.1| SSU ribosomal protein S2p (SAe) [Campylobacter jejuni subsp. jejuni S3] Length = 263 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|317129176|ref|YP_004095458.1| ribosomal protein S2 [Bacillus cellulosilyticus DSM 2522] gi|315474124|gb|ADU30727.1| ribosomal protein S2 [Bacillus cellulosilyticus DSM 2522] Length = 232 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + +A + D +G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVDEAFNYVRDLAGQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V E A+R Y +N +WLGG +TN+ T+ + I +L+DLE + +E Sbjct: 65 GTMLFVGTKKQAQDAVKEEAERCGMYFINQRWLGGTLTNFDTIRKRIGRLKDLERM--QE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++++ D+L++ L GI+DM LPD +F++D +E++A+ EAR+L IP Sbjct: 123 DGTFEVLPKKEVVLLKKEMDRLEKFLGGIKDMDKLPDALFIIDPRKERIAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IV +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVRLLTAKMADAIIEA 224 >gi|121533730|ref|ZP_01665557.1| ribosomal protein S2 [Thermosinus carboxydivorans Nor1] gi|121307721|gb|EAX48636.1| ribosomal protein S2 [Thermosinus carboxydivorans Nor1] Length = 234 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 107/234 (45%), Positives = 158/234 (67%), Gaps = 9/234 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I D A+G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFIRDVAAQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + V E A R + VN +WLGGM+TN++T+ + I +LR+LE++ E Sbjct: 65 QSILFVGTKKQAQEAVKEEATRCDMFYVNERWLGGMLTNFQTIQKRINRLRELEDM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + + + ++L++ L GI++M LP +F++D +E++A+ EAR+L I Sbjct: 122 EKGVFDVLPKKEVMALRHEMERLQKFLGGIKNMNKLPGALFIIDPRKERIAVAEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 PIVA+VDTN +PD VDYVIPGNDD+ R++ L +A A ++G RQ + A+ Sbjct: 182 PIVAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTSKMADAVLEG--RQGEQLAAE 233 >gi|227890577|ref|ZP_04008382.1| 30S ribosomal protein S2 [Lactobacillus salivarius ATCC 11741] gi|301299671|ref|ZP_07205927.1| ribosomal protein S2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|227867515|gb|EEJ74936.1| 30S ribosomal protein S2 [Lactobacillus salivarius ATCC 11741] gi|300214334|gb|ADJ78750.1| 30S ribosomal protein S2 [Lactobacillus salivarius CECT 5713] gi|300852739|gb|EFK80367.1| ribosomal protein S2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 265 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A I D + Sbjct: 4 ITMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLIDDAYDFIKDAASD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E AKR+ QY VN +WLGG +TNW T+ + I+KL++++ + Sbjct: 64 DGVVLFVGTKKQAQEAIEEEAKRAGQYYVNHRWLGGTLTNWNTIQKRIKKLKEIKAM--A 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++RD+L++ L GI DM +PD++F+VD +E++A++EA++L I Sbjct: 122 EDGTFDRLPKKEVALLIKQRDRLEKFLGGIEDMPRIPDVLFIVDPRKERIAVKEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNADPDEIDVKIPSNDDAIRAVRLITSKMADAIIEG 224 >gi|239917202|ref|YP_002956760.1| SSU ribosomal protein S2P [Micrococcus luteus NCTC 2665] gi|281414325|ref|ZP_06246067.1| 30S ribosomal protein S2 [Micrococcus luteus NCTC 2665] gi|259495219|sp|C5C9Q4|RS2_MICLC RecName: Full=30S ribosomal protein S2 gi|239838409|gb|ACS30206.1| SSU ribosomal protein S2P [Micrococcus luteus NCTC 2665] Length = 285 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 116/235 (49%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ TVS+ +Q++++LEE+ Sbjct: 61 VAHGGTILFVGTKKQAQEAIAEQAGRVGMPYVNHRWLGGMLTNFSTVSKRVQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ G FTKKE L + R+ +KL+ L GIR+M P ++VVDT +E LA+ EA++L Sbjct: 121 DFEDVAGSQFTKKELLLLNRELEKLQANLGGIRNMAKTPSAVWVVDTKKEHLAVDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG 234 IP+VA++DTN +PD V Y IPGNDD+ RS+ L +VA A +G IARQ G Sbjct: 181 GIPVVAILDTNCDPDEVAYPIPGNDDAIRSVNLLTRVVADAVAEGLIARQGGKSG 235 >gi|28378686|ref|NP_785578.1| 30S ribosomal protein S2 [Lactobacillus plantarum WCFS1] gi|254556884|ref|YP_003063301.1| 30S ribosomal protein S2 [Lactobacillus plantarum JDM1] gi|300768199|ref|ZP_07078104.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180827|ref|YP_003924955.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258330|sp|Q88VJ4|RS2_LACPL RecName: Full=30S ribosomal protein S2 gi|28271523|emb|CAD64427.1| ribosomal protein S2 [Lactobacillus plantarum WCFS1] gi|254045811|gb|ACT62604.1| 30S ribosomal protein S2 [Lactobacillus plantarum JDM1] gi|300494263|gb|EFK29426.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046318|gb|ADN98861.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 267 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 152/221 (68%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDSAYNFVKDAAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ILFV TK QA D + E A R+ QY VN +WLGG +TNW T+ I++L+DL+++ + Sbjct: 64 DGVILFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWNTIQTRIKRLKDLKKMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++R KL++ L GI DM +PD++F+VD +E++A++EA++L IPI Sbjct: 124 GTFERLPKKEVSLLMKQRAKLEKFLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 184 VAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAVIEG 224 >gi|313896175|ref|ZP_07829728.1| ribosomal protein S2 [Selenomonas sp. oral taxon 137 str. F0430] gi|320529262|ref|ZP_08030354.1| ribosomal protein S2 [Selenomonas artemidis F0399] gi|312974974|gb|EFR40436.1| ribosomal protein S2 [Selenomonas sp. oral taxon 137 str. F0430] gi|320138892|gb|EFW30782.1| ribosomal protein S2 [Selenomonas artemidis F0399] Length = 236 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 151/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLRSVAQE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LF+ TK QA + + E A R+ + VN +WLGGMMTN++T+ + I +L++LE + + Sbjct: 64 GKSVLFIGTKKQAQEAIREEALRANMFYVNERWLGGMMTNFQTIQRRIHRLKELEAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F TKKE + + +KL+R L GI+DM LP +FVVD +E++A+ EAR+L I Sbjct: 122 ENGTFEVLTKKEVQGLRHEMEKLERYLGGIKDMNRLPGALFVVDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEG 224 >gi|90961487|ref|YP_535403.1| 30S ribosomal protein S2 [Lactobacillus salivarius UCC118] gi|123086806|sp|Q1WUL5|RS2_LACS1 RecName: Full=30S ribosomal protein S2 gi|90820681|gb|ABD99320.1| SSU ribosomal protein S2P [Lactobacillus salivarius UCC118] Length = 265 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A I D + Sbjct: 4 ITMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLIDDAYDFIKDAASD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E AKR+ QY VN +WLGG +TNW T+ + I+KL++++ + Sbjct: 64 DGVVLFVGTKKQAQEAIEEEAKRAGQYYVNHRWLGGTLTNWNTIQKRIKKLKEIKAM--A 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++RD+L++ L GI DM +PD++F+VD +E++A++EA++L I Sbjct: 122 EDGTFDRLPKKEVALLIKQRDRLEKFLGGIEDMPRIPDVLFIVDPRKERIAVKEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNADPDEIDVKIPSNDDAIRAVRLITSKMADAIIEG 224 >gi|319892271|ref|YP_004149146.1| SSU ribosomal protein S2p (SAe) [Staphylococcus pseudintermedius HKU10-03] gi|317161967|gb|ADV05510.1| SSU ribosomal protein S2p (SAe) [Staphylococcus pseudintermedius HKU10-03] gi|323464632|gb|ADX76785.1| ribosomal protein S2 [Staphylococcus pseudintermedius ED99] Length = 265 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQVSEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Y VN +WLGG++TN+KT+S+ +Q++ ++E++ + Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERAGHYYVNQRWLGGILTNYKTISKRVQRISEIEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ D+L + L GIR+M +P +FVVD +E+ AI EAR+L I Sbjct: 122 EDGTFDVLPKKEVVELKKEYDRLIKFLGGIREMKSMPQALFVVDPRKERNAIAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 182 PIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG 224 >gi|319401454|gb|EFV89664.1| ribosomal protein S2 [Staphylococcus epidermidis FRI909] Length = 262 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQISEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG 224 >gi|328944067|ref|ZP_08241532.1| 30S ribosomal protein S2 [Atopobium vaginae DSM 15829] gi|327492036|gb|EGF23810.1| 30S ribosomal protein S2 [Atopobium vaginae DSM 15829] Length = 270 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 105/227 (46%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G +GH+ WNPKM+ YIF ERN +I+DL QTV KA + + + Sbjct: 17 KINIRTLLEAGCHYGHQTRRWNPKMKPYIFGERNGIYILDLKQTVVNADKAYTFLKNCAS 76 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 + GRILFV TK QA + V E AKR +N +WLGGM+TN+ T+ I ++ +LE ++ Sbjct: 77 KKGRILFVGTKKQAQEAVAEQAKRCDMPYINQRWLGGMLTNFVTMRSRIDRMEELEAMVE 136 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE+ + ++ +KL+R L G+RDM LP +F+VD+ RE++AI+EA RL IP Sbjct: 137 DGRMAALPKKEQAVLGKELEKLQRNLGGVRDMHALPQALFIVDSKREEIAIREANRLHIP 196 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VA++DTNS+PD+VDY IP NDD+ RS+ L C+LVA A + G ++ Sbjct: 197 VVALLDTNSDPDVVDYGIPANDDAIRSVNLMCELVADAVLAGKGKEQ 243 >gi|57168060|ref|ZP_00367199.1| ribosomal protein S2 [Campylobacter coli RM2228] gi|57020434|gb|EAL57103.1| ribosomal protein S2 [Campylobacter coli RM2228] Length = 263 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|329767061|ref|ZP_08258589.1| 30S ribosomal protein S2 [Gemella haemolysans M341] gi|328837786|gb|EGF87411.1| 30S ribosomal protein S2 [Gemella haemolysans M341] Length = 245 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 150/221 (67%), Gaps = 7/221 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + +G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSVADQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ E Sbjct: 65 GKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRIAEIEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + + ++ DKL + L GIR+M G+PD +FVVD +E AI EA++L I Sbjct: 122 ADGVFEVLPKKEVIELRKEYDKLNKFLGGIREMKGMPDAIFVVDPKKEHNAIAEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 P+V +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 182 PVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTAKMADAFV 222 >gi|260888307|ref|ZP_05899570.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] gi|260861843|gb|EEX76343.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] Length = 253 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + G Sbjct: 18 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVRKVDEAYNFLRSLAEEG 77 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D V E A ++ + VN +WLGGM+TN++T+ + I++L+DLE + +E Sbjct: 78 KSVLFVGTKKQAQDAVKEEATKAEMFYVNERWLGGMLTNYQTIQKRIRRLKDLERM--EE 135 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L + + KL++ L GI++M LP +FVVD +E++A+ EA++L IP Sbjct: 136 DGTFDVLTKKEVLQLRHEMTKLEKFLGGIKEMNRLPGALFVVDPRKERIAVAEAKKLNIP 195 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R++ L +ASA ++G Sbjct: 196 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSAMASAIVEG 237 >gi|208435434|ref|YP_002267100.1| ribosomal protein S2 [Helicobacter pylori G27] gi|208433363|gb|ACI28234.1| ribosomal protein S2 [Helicobacter pylori G27] Length = 261 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 152/222 (68%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 1 MKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ EN Sbjct: 61 SIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---EN 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IP Sbjct: 118 SGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 178 IVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 219 >gi|289550953|ref|YP_003471857.1| SSU ribosomal protein S2p (SAe) [Staphylococcus lugdunensis HKU09-01] gi|315658455|ref|ZP_07911327.1| 30S ribosomal protein S2 [Staphylococcus lugdunensis M23590] gi|289180485|gb|ADC87730.1| SSU ribosomal protein S2p (SAe) [Staphylococcus lugdunensis HKU09-01] gi|315496784|gb|EFU85107.1| 30S ribosomal protein S2 [Staphylococcus lugdunensis M23590] Length = 262 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEG 224 >gi|199597110|ref|ZP_03210542.1| Ribosomal protein S2 [Lactobacillus rhamnosus HN001] gi|229552430|ref|ZP_04441155.1| ribosomal protein S2 [Lactobacillus rhamnosus LMS2-1] gi|258508623|ref|YP_003171374.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus GG] gi|258539800|ref|YP_003174299.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus Lc 705] gi|199591914|gb|EDY99988.1| Ribosomal protein S2 [Lactobacillus rhamnosus HN001] gi|229314167|gb|EEN80140.1| ribosomal protein S2 [Lactobacillus rhamnosus LMS2-1] gi|257148550|emb|CAR87523.1| SSU/30S ribosomal protein S2P [Lactobacillus rhamnosus GG] gi|257151476|emb|CAR90448.1| SSU/30S ribosomal protein S2P [Lactobacillus rhamnosus Lc 705] gi|259649929|dbj|BAI42091.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus GG] Length = 262 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + + Sbjct: 4 LSMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDDAYNFVKEEAQN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA D + E A R+ Q+ VN +WLGG +TNW T+ I++L+D++++ Sbjct: 64 GGVFLFVGTKKQAQDAIAEEATRAGQFYVNHRWLGGTLTNWNTIQTRIKRLKDIKKMATD 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE +++++DKL++ L GI DM +PD++F+VD +EK+A+QEA++L IPI Sbjct: 124 GTFDVLPKKEVSLLKKQQDKLEKFLGGIEDMPRIPDVLFIVDPRKEKIAVQEAQKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 184 VAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAIIEG 224 >gi|86150353|ref|ZP_01068579.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839178|gb|EAQ56441.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CF93-6] Length = 262 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|88596393|ref|ZP_01099630.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 84-25] gi|88191234|gb|EAQ95206.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 84-25] Length = 263 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|330838367|ref|YP_004412947.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] gi|329746131|gb|AEB99487.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] Length = 240 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVRKVDEAYNFLRSLAEEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D V E A ++ + VN +WLGGM+TN++T+ + I++L+DLE + +E Sbjct: 65 KSVLFVGTKKQAQDAVKEEATKAEMFYVNERWLGGMLTNYQTIQKRIRRLKDLERM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F TKKE L + + KL++ L GI++M LP +FVVD +E++A+ EA++L IP Sbjct: 123 DGTFDVLTKKEVLQLRHEMTKLEKFLGGIKEMNRLPGALFVVDPRKERIAVAEAKKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R++ L +ASA ++G Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSAMASAIVEG 224 >gi|315650752|ref|ZP_07903804.1| 30S ribosomal protein S2 [Eubacterium saburreum DSM 3986] gi|315486959|gb|EFU77289.1| 30S ribosomal protein S2 [Eubacterium saburreum DSM 3986] Length = 262 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 108/257 (42%), Positives = 162/257 (63%), Gaps = 7/257 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL Q+V M+ A +SD Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQQSVGMVDTAYNAMSDIAKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + E A+R Y VN +WLGGM+TN+KT+ I++L LEE+ Sbjct: 64 GGKILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLHQLEEM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI+DM +PD +F++D +E++ +QEA L I Sbjct: 122 EDGTFDLLPKKEVIKLKKEWEKLEKNLGGIKDMKEIPDAIFIIDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++ + DTN +PD +DY+IPGNDD+ R++ L +A A I+ A Q + + Sbjct: 182 PLIGICDTNCDPDELDYLIPGNDDAIRAVKLIVAKMADAVIE--ANQGEILSTPDSESDS 239 Query: 243 TVVHSKEGMQLEEDSQS 259 V S EG + + ++ Sbjct: 240 EVDDSLEGNEFAPEKEA 256 >gi|242373547|ref|ZP_04819121.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W1] gi|242348910|gb|EES40512.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W1] Length = 262 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG 224 >gi|218562794|ref|YP_002344573.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|25009226|sp|Q9PNB3|RS2_CAMJE RecName: Full=30S ribosomal protein S2 gi|112360500|emb|CAL35297.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 263 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|257126433|ref|YP_003164547.1| 30S ribosomal protein S2 [Leptotrichia buccalis C-1013-b] gi|257050372|gb|ACV39556.1| ribosomal protein S2 [Leptotrichia buccalis C-1013-b] Length = 261 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 152/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ + A + + Sbjct: 4 ITMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLGATETAYEFVRQISEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--L 123 GG++LFV TK QA + + E A+R+ + VN++WLGG++TN T+ +++L+DLEE+ Sbjct: 64 GGKVLFVGTKKQAQEAIKEEAERAGGFYVNNRWLGGLLTNLNTIKTRVKRLKDLEEMDAD 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++ +TKKE + ++ KL + L GI++M LP +FVVD +E LA++EA++L IP Sbjct: 124 GTLDEAYTKKEAGLLRKEMAKLSKNLGGIKEMNTLPAALFVVDIKKEFLALEEAKKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++A++DTN +PDLV Y IP NDD+ RS+ LF ++A+AAI+G Sbjct: 184 VIALIDTNVDPDLVTYKIPANDDAIRSVKLFAQVIANAAIEG 225 >gi|27467850|ref|NP_764487.1| 30S ribosomal protein S2 [Staphylococcus epidermidis ATCC 12228] gi|57866730|ref|YP_188405.1| 30S ribosomal protein S2 [Staphylococcus epidermidis RP62A] gi|242242539|ref|ZP_04796984.1| 30S ribosomal protein S2 [Staphylococcus epidermidis W23144] gi|251810687|ref|ZP_04825160.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BCM-HMP0060] gi|282876312|ref|ZP_06285179.1| ribosomal protein S2 [Staphylococcus epidermidis SK135] gi|293366780|ref|ZP_06613456.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W2(grey)] gi|38258362|sp|Q8CSU2|RS2_STAES RecName: Full=30S ribosomal protein S2 gi|61215356|sp|Q5HPT5|RS2_STAEQ RecName: Full=30S ribosomal protein S2 gi|27315395|gb|AAO04529.1|AE016747_26 30S ribosomal protein S2 [Staphylococcus epidermidis ATCC 12228] gi|57637388|gb|AAW54176.1| ribosomal protein S2 [Staphylococcus epidermidis RP62A] gi|242233966|gb|EES36278.1| 30S ribosomal protein S2 [Staphylococcus epidermidis W23144] gi|251805847|gb|EES58504.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BCM-HMP0060] gi|281295337|gb|EFA87864.1| ribosomal protein S2 [Staphylococcus epidermidis SK135] gi|291319081|gb|EFE59451.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W2(grey)] gi|329724334|gb|EGG60846.1| ribosomal protein S2 [Staphylococcus epidermidis VCU144] gi|329736212|gb|EGG72484.1| ribosomal protein S2 [Staphylococcus epidermidis VCU028] gi|329736572|gb|EGG72838.1| ribosomal protein S2 [Staphylococcus epidermidis VCU045] Length = 262 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQISEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG 224 >gi|320120341|gb|EFE28420.2| 30S ribosomal protein S2 [Filifactor alocis ATCC 35896] Length = 252 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++RQLLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + +S A G Sbjct: 6 SMRQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLQKTVKKIEEAYEFVSTVAAEG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA D + E A+R Y VN +WLGGM+TN+KT+ I +LR+LE + +E Sbjct: 66 KPILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNYKTIRTRIDRLRELEAM--QE 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + ++ KL + LDGI+DM LP +F+VD +E++AI+EA+ L IP Sbjct: 124 DGTFDLLPKKEVMQLLHEKSKLVKYLDGIKDMPELPGAIFIVDPRKERIAIKEAQNLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ ++DTN +PD +DY IPGNDD+ R++ L +++ A I+ Sbjct: 184 LIGIIDTNCDPDEIDYPIPGNDDAIRAVKLITSVISQAVIEA 225 >gi|282600811|ref|ZP_05979781.2| ribosomal protein S2 [Subdoligranulum variabile DSM 15176] gi|282571013|gb|EFB76548.1| ribosomal protein S2 [Subdoligranulum variabile DSM 15176] Length = 242 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + DT A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNFVRDTAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I + +E+L + Sbjct: 65 GEILFVGTKKQAQESIRDEATRCGMHYVNARWLGGMLTNFRTIRKRIDR---MEQLKTMQ 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L I Sbjct: 122 ADGTFDLLPKKEVVKLELEMEKLDKYLGGVKNMKSLPKAMFIVDPHKERIAVSEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A+A ++G Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISGAMANAVLEG 224 >gi|323705416|ref|ZP_08116991.1| ribosomal protein S2 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535318|gb|EGB25094.1| ribosomal protein S2 [Thermoanaerobacterium xylanolyticum LX-11] Length = 235 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + V+ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIEEAYDFIKEVVSN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D V E A+R Y VN +WLGGM+TN+KT+ +++L++L+++ + Sbjct: 64 DGTVLFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNYKTIRSRVERLKELKKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + ++++KL++ L GI +M LP ++FVVD +E +AI EA+ L I Sbjct: 122 EDGTFEVLPKKEVIKLRKEKEKLQKYLGGIENMNSLPSVLFVVDPKKEAIAIAEAKNLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +P+ VDY IPGNDD+ R++ L +A A I+ Sbjct: 182 PIVAIVDTNCDPEEVDYPIPGNDDAIRAVKLIASKIADAVIEA 224 >gi|289706656|ref|ZP_06503004.1| ribosomal protein S2 [Micrococcus luteus SK58] gi|289556576|gb|EFD49919.1| ribosomal protein S2 [Micrococcus luteus SK58] Length = 282 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 116/235 (49%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ TVS+ +Q++++LEE+ Sbjct: 61 VAHGGTILFVGTKKQAQEAIAEQAGRVGMPYVNHRWLGGMLTNFSTVSKRVQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ G FTKKE L + R+ +KL+ L GIR+M P ++VVDT +E LA+ EA++L Sbjct: 121 DFEDVAGSQFTKKELLLLNRELEKLQANLGGIRNMSKTPSAVWVVDTKKEHLAVDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG 234 IP+VA++DTN +PD V Y IPGNDD+ RS+ L +VA A +G IARQ G Sbjct: 181 GIPVVAILDTNCDPDEVAYPIPGNDDAIRSVNLLTRVVADAVAEGLIARQGGKSG 235 >gi|121594923|ref|YP_986819.1| 30S ribosomal protein S2 [Acidovorax sp. JS42] gi|166225233|sp|A1W918|RS2_ACISJ RecName: Full=30S ribosomal protein S2 gi|120607003|gb|ABM42743.1| SSU ribosomal protein S2P [Acidovorax sp. JS42] Length = 250 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 152/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V E A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LESMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P+ +DYVIPGNDDS++++AL+ +A A ++G A Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGRA 224 >gi|283954740|ref|ZP_06372256.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 414] gi|283793580|gb|EFC32333.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 414] Length = 248 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|305431788|ref|ZP_07400955.1| 30S ribosomal protein S2 [Campylobacter coli JV20] gi|304444872|gb|EFM37518.1| 30S ribosomal protein S2 [Campylobacter coli JV20] Length = 248 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|257869597|ref|ZP_05649250.1| ribosomal protein S2 [Enterococcus gallinarum EG2] gi|257803761|gb|EEV32583.1| ribosomal protein S2 [Enterococcus gallinarum EG2] Length = 262 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + E A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ + Sbjct: 64 GGVALFVGTKKQAQEAIKEEAIRSGQYYVNHRWLGGTLTNWETIQKRVARLKQINKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + ++R++L++ L GI DM +PD+M+VVD +E++AIQEAR+L I Sbjct: 122 EDGTFDVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAIQEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 224 >gi|152980757|ref|YP_001353748.1| small subunit ribosomal protein S2 [Janthinobacterium sp. Marseille] gi|151280834|gb|ABR89244.1| small subunit ribosomal protein S2 [Janthinobacterium sp. Marseille] Length = 264 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M Q+A++ I + Sbjct: 20 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLSSNR 79 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A+R+ V+ +WLGGM+TN+KT+ SI++L+++E + Sbjct: 80 GTVLFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASIEDG 139 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + Q +KKE L ER++ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP++ Sbjct: 140 SVQKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ V YVIPGNDDSS++I L+ VA A ++G A Sbjct: 200 GVVDTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRA 241 >gi|306828621|ref|ZP_07461815.1| 30S ribosomal protein S2 [Streptococcus mitis ATCC 6249] gi|304429229|gb|EFM32315.1| 30S ribosomal protein S2 [Streptococcus mitis ATCC 6249] Length = 275 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 20 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 79 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 80 DAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 136 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 137 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 197 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 240 >gi|257876612|ref|ZP_05656265.1| ribosomal protein S2 [Enterococcus casseliflavus EC20] gi|257810778|gb|EEV39598.1| ribosomal protein S2 [Enterococcus casseliflavus EC20] Length = 257 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 153/221 (69%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 LFV TK QA + + E A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ +E+ Sbjct: 61 VALFVGTKKQAQEAIKEEAIRSGQYYVNHRWLGGTLTNWETIQKRVARLKQINKM--EED 118 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + + ++R++L++ L GI DM +PD+M+VVD +E++AIQEAR+L IPI Sbjct: 119 GTFAVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAIQEARKLNIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 179 VAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 219 >gi|207092621|ref|ZP_03240408.1| 30S ribosomal protein S2 [Helicobacter pylori HPKX_438_AG0C1] Length = 264 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 106/223 (47%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPK +++IF R N +IIDL +T+ + ++ D A+G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIYIIDLQKTLRYFRYTYNIVRDASAQG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ E Sbjct: 63 KSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L I Sbjct: 120 NSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G Sbjct: 180 PIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEG 222 >gi|188586053|ref|YP_001917598.1| SSU ribosomal protein S2P [Natranaerobius thermophilus JW/NM-WN-LF] gi|229470516|sp|B2A380|RS2_NATTJ RecName: Full=30S ribosomal protein S2 gi|179350740|gb|ACB85010.1| SSU ribosomal protein S2P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 232 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM+RYIF ERN +I+DL +TV L +A + + + A G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIVDLQKTVKKLDEAYEFVKELAANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I+FV TK QA D V A+R + VN +WLGGM+TN++T+S+ + + +LE++ +E Sbjct: 65 EKIMFVGTKKQAQDAVKNEAERCEMFYVNQRWLGGMLTNFQTISKRLNRFYELEQM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE ++ R+ KL + L G+R M LP +FV+D +EK+A+ EAR+L IP Sbjct: 123 DGTFEVLPKKEVQSLRREHAKLDKFLGGLRGMEDLPGALFVIDPKKEKIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IV++VDTN +PD VDYVIPGNDD+ R++ L + +A + ++G Sbjct: 183 IVSIVDTNCDPDEVDYVIPGNDDAIRAVKLITEKIADSVLEG 224 >gi|259501575|ref|ZP_05744477.1| 30S ribosomal protein S2 [Lactobacillus iners DSM 13335] gi|302191451|ref|ZP_07267705.1| 30S ribosomal protein S2 [Lactobacillus iners AB-1] gi|309804290|ref|ZP_07698367.1| ribosomal protein S2 [Lactobacillus iners LactinV 11V1-d] gi|309805547|ref|ZP_07699592.1| ribosomal protein S2 [Lactobacillus iners LactinV 09V1-c] gi|309807196|ref|ZP_07701170.1| ribosomal protein S2 [Lactobacillus iners LactinV 03V1-b] gi|309808817|ref|ZP_07702702.1| ribosomal protein S2 [Lactobacillus iners LactinV 01V1-a] gi|309809522|ref|ZP_07703380.1| ribosomal protein S2 [Lactobacillus iners SPIN 2503V10-D] gi|312871358|ref|ZP_07731454.1| ribosomal protein S2 [Lactobacillus iners LEAF 3008A-a] gi|312872456|ref|ZP_07732525.1| ribosomal protein S2 [Lactobacillus iners LEAF 2062A-h1] gi|312873340|ref|ZP_07733393.1| ribosomal protein S2 [Lactobacillus iners LEAF 2052A-d] gi|312875783|ref|ZP_07735775.1| ribosomal protein S2 [Lactobacillus iners LEAF 2053A-b] gi|315653421|ref|ZP_07906343.1| 30S ribosomal protein S2 [Lactobacillus iners ATCC 55195] gi|325911886|ref|ZP_08174290.1| ribosomal protein S2 [Lactobacillus iners UPII 143-D] gi|325913465|ref|ZP_08175831.1| ribosomal protein S2 [Lactobacillus iners UPII 60-B] gi|329919855|ref|ZP_08276793.1| ribosomal protein S2 [Lactobacillus iners SPIN 1401G] gi|259167093|gb|EEW51588.1| 30S ribosomal protein S2 [Lactobacillus iners DSM 13335] gi|308163693|gb|EFO65963.1| ribosomal protein S2 [Lactobacillus iners LactinV 11V1-d] gi|308165198|gb|EFO67436.1| ribosomal protein S2 [Lactobacillus iners LactinV 09V1-c] gi|308166417|gb|EFO68622.1| ribosomal protein S2 [Lactobacillus iners LactinV 03V1-b] gi|308167943|gb|EFO70076.1| ribosomal protein S2 [Lactobacillus iners LactinV 01V1-a] gi|308170194|gb|EFO72229.1| ribosomal protein S2 [Lactobacillus iners SPIN 2503V10-D] gi|311088687|gb|EFQ47139.1| ribosomal protein S2 [Lactobacillus iners LEAF 2053A-b] gi|311091130|gb|EFQ49521.1| ribosomal protein S2 [Lactobacillus iners LEAF 2052A-d] gi|311092038|gb|EFQ50413.1| ribosomal protein S2 [Lactobacillus iners LEAF 2062A-h1] gi|311093110|gb|EFQ51458.1| ribosomal protein S2 [Lactobacillus iners LEAF 3008A-a] gi|315489346|gb|EFU78986.1| 30S ribosomal protein S2 [Lactobacillus iners ATCC 55195] gi|325476392|gb|EGC79554.1| ribosomal protein S2 [Lactobacillus iners UPII 143-D] gi|325477234|gb|EGC80380.1| ribosomal protein S2 [Lactobacillus iners UPII 60-B] gi|328936945|gb|EGG33375.1| ribosomal protein S2 [Lactobacillus iners SPIN 1401G] Length = 257 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + D G Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKDVATDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D V E A R+ QY +N +WLGG +TNW T+ +Q+L+ L+++ E Sbjct: 65 GVFLFVGTKKQAQDAVKEEAIRAGQYFINERWLGGTLTNWSTIQSRVQRLKQLKKM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL+R L GI DM +PD+MFVVD +EK+A+ EA L IP Sbjct: 123 DGTFELLPKKEVAVLTKELDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P+ VD VIP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPEPVDVVIPSNDDAIRAIRLIAGAMADAVIEG 224 >gi|20807856|ref|NP_623027.1| 30S ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4] gi|25009202|sp|Q8RA21|RS2_THETN RecName: Full=30S ribosomal protein S2 gi|20516420|gb|AAM24631.1| Ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4] Length = 235 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + V G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLVMDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + E A+R + VN +WLGG +TN+KT+ IQ+L++L+ + +E Sbjct: 65 GTILFVGTKKQAQESIKEEAERCGMFYVNQRWLGGTLTNFKTIKTRIQRLKELKRM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L IP Sbjct: 123 DGTFEVLPKKEVIRLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVSEARALEIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +P+L+DY IPGNDD+ R++ L +A A ++G Sbjct: 183 IVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVLEG 224 >gi|222824093|ref|YP_002575667.1| 30S ribosomal protein S2 [Campylobacter lari RM2100] gi|254764464|sp|B9KCX7|RS2_CAMLR RecName: Full=30S ribosomal protein S2 gi|222539315|gb|ACM64416.1| 30S ribosomal protein S2 [Campylobacter lari RM2100] Length = 261 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 150/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RL+I Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLKI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLVD+ IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVDFPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|225867730|ref|YP_002743678.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus] gi|225869602|ref|YP_002745549.1| 30S ribosomal protein S2 [Streptococcus equi subsp. equi 4047] gi|254764491|sp|C0MAG7|RS2_STRE4 RecName: Full=30S ribosomal protein S2 gi|259495225|sp|C0MEG6|RS2_STRS7 RecName: Full=30S ribosomal protein S2 gi|225699006|emb|CAW92092.1| 30S ribosomal protein S2 [Streptococcus equi subsp. equi 4047] gi|225701006|emb|CAW97763.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus] Length = 256 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 106/252 (42%), Positives = 167/252 (66%), Gaps = 10/252 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG--ADTKS 239 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + ADT++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEGRQGEDAEVAFEADTQA 240 Query: 240 AG-ETVVHSKEG 250 E +V EG Sbjct: 241 ESIEEIVEVVEG 252 >gi|315926601|gb|EFV05982.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 260 Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 148/224 (66%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 1 MRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 61 TILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---EE 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP Sbjct: 118 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 178 VVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 221 >gi|261867313|ref|YP_003255235.1| 30S ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293390942|ref|ZP_06635276.1| ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261412645|gb|ACX82016.1| ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290951476|gb|EFE01595.1| ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 240 Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 109/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNAALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK A+D V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAATDAVQAAALECQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ +A +G Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLASAVAAIKEG 224 >gi|308068686|ref|YP_003870291.1| 30S ribosomal protein S2 [Paenibacillus polymyxa E681] gi|310641581|ref|YP_003946339.1| 30S ribosomal protein s2 [Paenibacillus polymyxa SC2] gi|305857965|gb|ADM69753.1| 30S ribosomal protein S2 [Paenibacillus polymyxa E681] gi|309246530|gb|ADO56097.1| 30S ribosomal protein S2 [Paenibacillus polymyxa SC2] Length = 232 Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 153/221 (69%), Gaps = 5/221 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + A Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSIAAEN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D V E A R+ Q+ +N +WLGG +TN++T+ + I +L+ LE +E Sbjct: 65 GTILFVGTKKQAQDSVKEEAARAGQFYINQRWLGGTLTNFQTIQKRIDRLKQLEAW--EE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++D+L++ L GI++M GLP +F++D +E++A+ EAR+L IP Sbjct: 123 DGTFAVLPKKEVIILRKEKDRLEKFLGGIKNMKGLPSALFIIDPRKERIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IV +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVME 223 >gi|153952052|ref|YP_001397722.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. doylei 269.97] gi|166225256|sp|A7H2J2|RS2_CAMJD RecName: Full=30S ribosomal protein S2 gi|152939498|gb|ABS44239.1| ribosomal protein S2 [Campylobacter jejuni subsp. doylei 269.97] Length = 263 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGALKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|331701335|ref|YP_004398294.1| 30S ribosomal protein S2 [Lactobacillus buchneri NRRL B-30929] gi|329128678|gb|AEB73231.1| ribosomal protein S2 [Lactobacillus buchneri NRRL B-30929] Length = 266 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 110/257 (42%), Positives = 165/257 (64%), Gaps = 9/257 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV ++ A + D A+ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVKLIDVAYNFMKDEAAK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A R+ QY VN++WLGG +TNW+T+ +++L+DL+++ Sbjct: 64 GAVVLFVGTKKQAQDSIAEEATRAGQYYVNNRWLGGTLTNWETIQSRVKRLKDLKKMSTD 123 Query: 126 ENQGFTKKERLNIERKRD-KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K+ +++ K++ KL+R L GI DM +PD+MF+VD +E++A+ EA +L IPI Sbjct: 124 GTFDILPKKEVSLLIKQEQKLERFLGGIEDMPKIPDVMFIVDPRKEQIAVHEAMKLNIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN++PD +D VIP NDD+ R++ L +A A I+G RQ G D E Sbjct: 184 VAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSKMADAIIEG--RQ----GED--DVNEKT 235 Query: 245 VHSKEGMQLEEDSQSSE 261 K+G + ++ S E Sbjct: 236 FEGKDGAKADKKEDSIE 252 >gi|222153849|ref|YP_002563026.1| 30S ribosomal protein S2 [Streptococcus uberis 0140J] gi|254764494|sp|B9DW41|RS2_STRU0 RecName: Full=30S ribosomal protein S2 gi|222114662|emb|CAR43722.1| 30S ribosomal protein S2 [Streptococcus uberis 0140J] Length = 255 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 107/252 (42%), Positives = 167/252 (66%), Gaps = 10/252 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRITRLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM--GADTKS 239 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + ADTK+ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAIIEGRQGEDASVEFEADTKA 240 Query: 240 AG-ETVVHSKEG 250 E +V EG Sbjct: 241 DSIEEIVEVVEG 252 >gi|314936583|ref|ZP_07843930.1| ribosomal protein S2 [Staphylococcus hominis subsp. hominis C80] gi|313655202|gb|EFS18947.1| ribosomal protein S2 [Staphylococcus hominis subsp. hominis C80] Length = 262 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 155/224 (69%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R++Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERASQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEG 224 >gi|307702781|ref|ZP_07639731.1| ribosomal protein S2 [Streptococcus oralis ATCC 35037] gi|322375192|ref|ZP_08049706.1| ribosomal protein S2 [Streptococcus sp. C300] gi|331267312|ref|YP_004326942.1| 30S ribosomal protein S2 [Streptococcus oralis Uo5] gi|307623637|gb|EFO02624.1| ribosomal protein S2 [Streptococcus oralis ATCC 35037] gi|321280692|gb|EFX57731.1| ribosomal protein S2 [Streptococcus sp. C300] gi|326683984|emb|CBZ01602.1| 30S ribosomal protein S2 [Streptococcus oralis Uo5] Length = 259 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|167630324|ref|YP_001680823.1| 30S ribosomal protein s2 [Heliobacterium modesticaldum Ice1] gi|238687987|sp|B0THD7|RS2_HELMI RecName: Full=30S ribosomal protein S2 gi|167593064|gb|ABZ84812.1| 30S ribosomal protein s2 [Heliobacterium modesticaldum Ice1] Length = 232 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVRKVDEAYNFIREVATQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +ILFV TK QA D V E A+R Y VN +WLGGM+TN++T+ + I +LR+LE++ + Sbjct: 64 GKKILFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNFQTIQKRISRLRELEKMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + +++KL+R L GI+DM LP +FV+D +E++A+ EARRL IP+ Sbjct: 124 GTFEVLPKKEVSKLLHEKEKLERFLGGIKDMKELPGAIFVIDPRKERIAVAEARRLGIPL 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V +VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 184 VGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADAVLEG 224 >gi|332522143|ref|ZP_08398395.1| ribosomal protein S2 [Streptococcus porcinus str. Jelinkova 176] gi|332313407|gb|EGJ26392.1| ribosomal protein S2 [Streptococcus porcinus str. Jelinkova 176] Length = 255 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRITRLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 224 >gi|313890410|ref|ZP_07824041.1| ribosomal protein S2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121253|gb|EFR44361.1| ribosomal protein S2 [Streptococcus pseudoporcinus SPIN 20026] Length = 255 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 224 >gi|300311493|ref|YP_003775585.1| 30S ribosomal protein S2 [Herbaspirillum seropedicae SmR1] gi|124483406|emb|CAM32576.1| 30S ribosomal subunit protein S2 [Herbaspirillum seropedicae] gi|300074278|gb|ADJ63677.1| 30S ribosomal subunit protein S2 [Herbaspirillum seropedicae SmR1] Length = 246 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M Q+A + + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGMYQEAQKYVRQLSANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A+R+ V+ +WLGGM+TN+KT+ SI++L+D+E + Sbjct: 64 GTILFVGTKRQAREILAAEAQRAGVPYVDQRWLGGMLTNFKTIKTSIKRLKDMEAAVEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + +KKE L R+++KL++A+ GI+DMGG+PD +FV+D K AI EA +L IP++ Sbjct: 124 SVEKLSKKEALLFSREQEKLQKAIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ V YVIPGNDDS+++IAL+ +A A ++G A Sbjct: 184 GVVDTNHSPEGVTYVIPGNDDSAKAIALYARGMADAVLEGRA 225 >gi|221632991|ref|YP_002522214.1| 30S ribosomal protein S2 [Thermomicrobium roseum DSM 5159] gi|221156593|gb|ACM05720.1| ribosomal protein S2 [Thermomicrobium roseum DSM 5159] Length = 290 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 112/239 (46%), Positives = 151/239 (63%), Gaps = 1/239 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q ++ LLE+GV FGH++ WNPKM YIF ERN HIIDL QTV +L +A + A Sbjct: 10 QVPLKALLEAGVHFGHQSKRWNPKMRPYIFGERNGIHIIDLRQTVRLLAEAESFARNLAA 69 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG +FV TK QA + + A+R Y V +WLGG +TN+ T+ Q ++ L LEE + Sbjct: 70 RGGVFVFVGTKKQAQEIIRSEAERCGMYSVTERWLGGTLTNFVTIRQRLRYLVQLEEEVR 129 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N F KKE++ R+ KL+R L G+R + LPD ++VVD RE +A+ EARRL IP Sbjct: 130 SPNFAFLPKKEQMRKLRELAKLERTLGGLRGLTRLPDALYVVDPKREAIAVAEARRLGIP 189 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 I+A+VDTN +PDL+DYVIP NDD+ RSI L +A A + G + +GA + A E Sbjct: 190 IIAMVDTNCDPDLIDYVIPANDDAIRSIRLITSRIADAILAGRTMYETEVGAGEQVALE 248 >gi|295100710|emb|CBK98255.1| SSU ribosomal protein S2P [Faecalibacterium prausnitzii L2-6] Length = 240 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I ++ L+ + K+ Sbjct: 65 GDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMAQLQNM--KD 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N F KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L IP Sbjct: 123 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 183 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEG 224 >gi|227497532|ref|ZP_03927760.1| ribosomal protein S2 [Actinomyces urogenitalis DSM 15434] gi|226832986|gb|EEH65369.1| ribosomal protein S2 [Actinomyces urogenitalis DSM 15434] Length = 285 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 112/222 (50%), Positives = 153/222 (68%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLLESGV FGH+ WNPKM+R+I ERN ++IDL +TV + A + +TVARG Sbjct: 5 TMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYVIDLVKTVEGINTAYDFVKETVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE++ + Sbjct: 65 GNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL + L GIRDM LP ++VVDT +E LAI EAR+L IP+ Sbjct: 125 VAGSGRTKKELLMMRREKDKLTKTLGGIRDMAKLPAAIWVVDTKKEHLAIAEARKLNIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A++DTN +PD V Y IPGNDD+ R++ L +VA AA +G+ Sbjct: 185 IAILDTNCDPDEVTYGIPGNDDAIRAVTLLTRVVADAAAEGL 226 >gi|313618586|gb|EFR90558.1| ribosomal protein S2 [Listeria innocua FSL S4-378] Length = 249 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ +E++ Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQXXXKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|283956580|ref|ZP_06374059.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1336] gi|283791829|gb|EFC30619.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1336] Length = 263 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 110/225 (48%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ + A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVREAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FVVDT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVVDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|218295070|ref|ZP_03495906.1| ribosomal protein S2 [Thermus aquaticus Y51MC23] gi|218244273|gb|EED10798.1| ribosomal protein S2 [Thermus aquaticus Y51MC23] Length = 263 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/221 (47%), Positives = 149/221 (67%), Gaps = 3/221 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + + D RG Sbjct: 6 TVKELLEAGVHFGHERKRWNPKFGRYIYAERNGIHIIDLQKTMVELERTFRFLEDLAMRG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V A R+ VN +WLGGM+TN+KT++Q + +L +LE L E Sbjct: 66 GTVLFVGTKKQAQDIVRMEADRAGMPYVNQRWLGGMLTNFKTIAQRVNRLEELENLFASE 125 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 NQ KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP+ Sbjct: 126 DINQR-PKKEQVRLKHELERLQKYLSGFRRLKRLPDAIFVVDPTKEAIAVREARKLFIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +A+ DT+S+PDLVDY+IPGNDD+ RSI L A I+ Sbjct: 185 IALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAADLIIEA 225 >gi|317495171|ref|ZP_07953541.1| ribosomal protein S2 [Gemella moribillum M424] gi|316914593|gb|EFV36069.1| ribosomal protein S2 [Gemella moribillum M424] Length = 246 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 150/221 (67%), Gaps = 7/221 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + +G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSVADQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ E Sbjct: 65 GKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRIAEIEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + + ++ DKL + L GIR+M G+PD +FVVD +E AI EA++L I Sbjct: 122 ADGVFEVLPKKEVIELRKEYDKLNKFLGGIREMKGMPDAIFVVDPKKEHNAIAEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 P+V +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 182 PVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTAKMADAFV 222 >gi|209574094|sp|Q0AYK4|RS2_SYNWW RecName: Full=30S ribosomal protein S2 Length = 232 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 150/223 (67%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL QTV A + + A G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMATYIYMERNGIYIIDLQQTVKKFDAAYEFVKSVAAAG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA + + E A R Y VN +WLGGM+TN+KT+ + + +L++LE+ +E Sbjct: 65 KGVLFVGTKKQAQETIREEASRCGMYFVNQRWLGGMLTNYKTIKRRVLRLKELEK---QE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G +KKE + +R++L+R L GI++M LP +FVVD +E++A+ EAR+L I Sbjct: 122 AEGAFEVLSKKEVARLLNERERLERFLGGIKEMDKLPGAVFVVDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 182 PVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISSRIADAVLEG 224 >gi|223044236|ref|ZP_03614273.1| ribosomal protein S2 [Staphylococcus capitis SK14] gi|314933435|ref|ZP_07840800.1| ribosomal protein S2 [Staphylococcus caprae C87] gi|222442386|gb|EEE48494.1| ribosomal protein S2 [Staphylococcus capitis SK14] gi|313653585|gb|EFS17342.1| ribosomal protein S2 [Staphylococcus caprae C87] Length = 262 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG 224 >gi|160947372|ref|ZP_02094539.1| hypothetical protein PEPMIC_01306 [Parvimonas micra ATCC 33270] gi|158446506|gb|EDP23501.1| hypothetical protein PEPMIC_01306 [Parvimonas micra ATCC 33270] Length = 275 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/219 (46%), Positives = 155/219 (70%), Gaps = 3/219 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + + VA GG Sbjct: 31 MKNLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKQIEQAYDFVREIVADGG 90 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA + V AKRS Q+ V+ +WLGGM+TN+KT+ + I++L+ L EL+ ++ Sbjct: 91 RVLFVGTKKQAQEAVETEAKRSGQFYVSHRWLGGMLTNYKTIRKRIERLKKL-ELMEEDG 149 Query: 128 --QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q KKE + ++R+ +KL++ L GI++M LPD++FV+D EK+A+ EA+ L IP++ Sbjct: 150 TFQRLPKKEVIKLKREAEKLEKFLGGIKEMDKLPDVLFVIDPKNEKIAVNEAKILGIPVI 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VVDTN +PD VD IPGNDD+ R++ L +A+A ++ Sbjct: 210 GVVDTNCDPDEVDIAIPGNDDAIRAVKLLTGTIANAIVE 248 >gi|237736209|ref|ZP_04566690.1| SSU ribosomal protein S2P [Fusobacterium mortiferum ATCC 9817] gi|229421762|gb|EEO36809.1| SSU ribosomal protein S2P [Fusobacterium mortiferum ATCC 9817] Length = 250 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 153/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A V+ + + Sbjct: 4 ITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYAVMREIAEQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-- 123 GG++LFV TK QA + V E A+RS Y VN++WLGGM+TN+ T+ +++L++LE++ Sbjct: 64 GGKVLFVGTKKQAQEAVKEQAERSGMYYVNNRWLGGMLTNFATIKTRVERLKELEQMEAD 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +TKKE N ++ KL + L GI+DM +P +F+VD +E LAI+EA L IP Sbjct: 124 GTLDTAYTKKEAANFRKELAKLSKNLCGIKDMKEVPAAVFIVDCKKETLAIKEASDLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A I+G Sbjct: 184 VFAMIDTNVDPDLITYPIPANDDAIRSVKLISSVMANAIIEG 225 >gi|195977283|ref|YP_002122527.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195973988|gb|ACG61514.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 251 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 106/250 (42%), Positives = 166/250 (66%), Gaps = 10/250 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAANDA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + E Sbjct: 61 VILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM---EE 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L IP Sbjct: 118 EGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG--ADTKSAG 241 +VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + ADT++ Sbjct: 178 VVAMVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEGRQGEDAEVAFEADTQAES 237 Query: 242 -ETVVHSKEG 250 E +V EG Sbjct: 238 IEEIVEVVEG 247 >gi|229544422|ref|ZP_04433480.1| ribosomal protein S2 [Bacillus coagulans 36D1] gi|229324907|gb|EEN90584.1| ribosomal protein S2 [Bacillus coagulans 36D1] Length = 251 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + D Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKDLAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + V + A+RS + VN +WLGG +TN++T+ + I +L+ +E++ + Sbjct: 64 GGNILFVGTKKQAQESVKDEAERSGMFYVNHRWLGGTLTNFETIQKRIDRLKQIEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ D+L + L GI+DM LPD +FV+D +E++A+ EAR+L I Sbjct: 122 EDGTFDVLPKKEVVQLKKEHDRLVKFLGGIKDMRNLPDALFVIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAIVE 223 >gi|319762175|ref|YP_004126112.1| ribosomal protein s2 [Alicycliphilus denitrificans BC] gi|330826013|ref|YP_004389316.1| 30S ribosomal protein S2 [Alicycliphilus denitrificans K601] gi|317116736|gb|ADU99224.1| ribosomal protein S2 [Alicycliphilus denitrificans BC] gi|329311385|gb|AEB85800.1| ribosomal protein S2 [Alicycliphilus denitrificans K601] Length = 250 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 152/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V E A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LESMSKKEQLMFSRELEKLEKDIGGIQDMNALPDAIFVIDVGYHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P+ +DYVIPGNDDS++++AL+ +A A ++G A Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGRA 224 >gi|228475062|ref|ZP_04059790.1| ribosomal protein S2 [Staphylococcus hominis SK119] gi|228271047|gb|EEK12435.1| ribosomal protein S2 [Staphylococcus hominis SK119] Length = 262 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEG 224 >gi|332637901|ref|ZP_08416764.1| 30S ribosomal protein S2 [Weissella cibaria KACC 11862] Length = 258 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 109/255 (42%), Positives = 160/255 (62%), Gaps = 12/255 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++ +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMSEYIFTERNGIYIIDLQKTVKLVDQAYNYVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A R+ + VN +WLGG +TNW T+ + + +L++L + Sbjct: 64 GATVLFVGTKKQAQDAIAEEATRANMFYVNHRWLGGTLTNWSTIQKRVARLKELRAM--A 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + R+KL++ L GI DM +PDL+F+VD ++E+LA+QEA +L I Sbjct: 122 EDGTFDRLPKKEVALLNKSREKLEKFLGGIADMPKIPDLLFIVDPHKEQLAVQEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-------IARQHSYMGA 235 PIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G A + GA Sbjct: 182 PIVAMVDTNADPDQIDVKIPSNDDAIRAVRLITAKMADAIIEGNQGEDAVAAEDFAAEGA 241 Query: 236 DTKSAGETVVHSKEG 250 D ++ E + EG Sbjct: 242 DKAASIEELTEIVEG 256 >gi|329117523|ref|ZP_08246240.1| ribosomal protein S2 [Streptococcus parauberis NCFD 2020] gi|326907928|gb|EGE54842.1| ribosomal protein S2 [Streptococcus parauberis NCFD 2020] Length = 255 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 164/243 (67%), Gaps = 7/243 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVSLLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + +T++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEGRQGEDADVNFETEAKA 240 Query: 242 ETV 244 +++ Sbjct: 241 DSI 243 >gi|251783454|ref|YP_002997759.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392086|dbj|BAH82545.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322412830|gb|EFY03738.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] gi|323128199|gb|ADX25496.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 255 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEG 224 >gi|238852608|ref|ZP_04643018.1| ribosomal protein S2 [Lactobacillus gasseri 202-4] gi|282850826|ref|ZP_06260200.1| ribosomal protein S2 [Lactobacillus gasseri 224-1] gi|238834754|gb|EEQ26981.1| ribosomal protein S2 [Lactobacillus gasseri 202-4] gi|282557778|gb|EFB63366.1| ribosomal protein S2 [Lactobacillus gasseri 224-1] Length = 261 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 112/258 (43%), Positives = 159/258 (61%), Gaps = 5/258 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + G Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ E Sbjct: 65 GVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L IP Sbjct: 123 DGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A + Sbjct: 183 VVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMADKA 242 Query: 244 VVHSKEGMQLEEDSQSSE 261 + + +EE + SE Sbjct: 243 AAENDDEESIEEVVEKSE 260 >gi|312879898|ref|ZP_07739698.1| SSU ribosomal protein S2P [Aminomonas paucivorans DSM 12260] gi|310783189|gb|EFQ23587.1| SSU ribosomal protein S2P [Aminomonas paucivorans DSM 12260] Length = 284 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 156/223 (69%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE GV FGH+ WNPKM+ +IF ERN +IIDL +TV L+KA + + G Sbjct: 5 SMKQLLECGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKGLEKAYDFVREISKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + + A +S Q+ +N +WLGG++TN+ T+ + + ++ +LE++ E Sbjct: 65 GSILFVGTKRQAQEPIRNEALKSGQFYINQRWLGGLLTNFATIRRRVNRMVELEQM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G + KKE + + ++R+KL++ L GI+DM PD +F++D RE +A+QEAR+L I Sbjct: 122 NDGSINRYPKKEIIQLRKEREKLEKYLSGIKDMRETPDALFIIDPRRETIAVQEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN +P+++D+ IPGNDD+ R+I L L++SA ++G Sbjct: 182 PVVAIVDTNCDPEVIDFPIPGNDDAIRAIELITGLMSSAFVEG 224 >gi|164687905|ref|ZP_02211933.1| hypothetical protein CLOBAR_01550 [Clostridium bartlettii DSM 16795] gi|164602318|gb|EDQ95783.1| hypothetical protein CLOBAR_01550 [Clostridium bartlettii DSM 16795] Length = 241 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 152/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVEEAYNFMKEIAET 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E A+R + VN +WLGGM+TN+KT+ I+KLR+LE++ Sbjct: 64 GKPVLFVGTKKQAQEAIKEEAERCGMFYVNERWLGGMLTNYKTIQTRIKKLRELEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + + ++KL++ L+GI++M LP +FVVD +E +AIQEA RL Sbjct: 121 EEEGVFEVLPKKEVIKLRALKEKLEKNLNGIKEMPELPGAIFVVDPRKENIAIQEAARLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V +VDTN +PD +DY IPGNDD+ R++ L +A+A I+G Sbjct: 181 IPVVGIVDTNCDPDELDYAIPGNDDAIRAVKLITGAMATAIIEG 224 >gi|323489576|ref|ZP_08094803.1| 30S ribosomal protein S2 [Planococcus donghaensis MPA1U2] gi|323396707|gb|EGA89526.1| 30S ribosomal protein S2 [Planococcus donghaensis MPA1U2] Length = 238 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVRKLEEAYSFMKQVGEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA D + E A+RS Y +N +WLGG +TN+ T+ + + +L+ +E + + Sbjct: 64 GGKVLFVGTKKQAQDAIKEEAERSGNYYINQRWLGGTLTNFGTIQKRVNRLKQIERM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EA +L I Sbjct: 122 EDGTFEVLPKKEVVQLKKQHERLVKFLGGIRDMSSLPDVMFVVDPRKERIAVAEAMKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 182 PIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADALLE 223 >gi|197303770|ref|ZP_03168807.1| hypothetical protein RUMLAC_02500 [Ruminococcus lactaris ATCC 29176] gi|197297290|gb|EDY31853.1| hypothetical protein RUMLAC_02500 [Ruminococcus lactaris ATCC 29176] Length = 255 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD A Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDIAAD 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I++L+D+E + Sbjct: 69 GGTILFVGTKKQAQDAIKAEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKDIEAM--A 126 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ DKL++ L GI+DM LPD +F+VD +E++ +QEA L I Sbjct: 127 EDGTFDVLPKKEVIELKKEWDKLEKNLGGIKDMKKLPDAIFIVDPKKERICVQEAHTLGI 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 187 PLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 228 >gi|295399839|ref|ZP_06809820.1| ribosomal protein S2 [Geobacillus thermoglucosidasius C56-YS93] gi|312111649|ref|YP_003989965.1| ribosomal protein S2 [Geobacillus sp. Y4.1MC1] gi|294978242|gb|EFG53839.1| ribosomal protein S2 [Geobacillus thermoglucosidasius C56-YS93] gi|311216750|gb|ADP75354.1| ribosomal protein S2 [Geobacillus sp. Y4.1MC1] Length = 235 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 98/235 (41%), Positives = 160/235 (68%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKMEEAYNFAKELAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++L+++E++ Sbjct: 64 GGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLKEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ L GI++M LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEQERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAVVAAE 235 >gi|15643525|ref|NP_228571.1| 30S ribosomal protein S2 [Thermotoga maritima MSB8] gi|7388195|sp|Q9WZM1|RS2_THEMA RecName: Full=30S ribosomal protein S2 gi|4981290|gb|AAD35844.1|AE001746_5 ribosomal protein S2 [Thermotoga maritima MSB8] Length = 262 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 105/227 (46%), Positives = 152/227 (66%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + + Sbjct: 1 MPVVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + A+R + VN++WLGG++TN+KT+ I KL +LEE+ Sbjct: 61 ASEGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIDKLIELEEM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE+ I R +KL++ L G+++M LPD++++VD +EK+A+ EA Sbjct: 121 ---EQSGKLEELPKKEQSRIRRVLEKLRKNLGGLKEMRRLPDIIYIVDPRKEKIAVAEAN 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A A ++G Sbjct: 178 KLGIPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIADAYLEG 224 >gi|114566417|ref|YP_753571.1| 30S ribosomal protein S2 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337352|gb|ABI68200.1| SSU ribosomal protein S2P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 236 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 104/227 (45%), Positives = 151/227 (66%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L T++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL QTV A + + Sbjct: 5 LSVVTMKQLLEAGVHFGHQTRRWNPKMATYIYMERNGIYIIDLQQTVKKFDAAYEFVKSV 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + + E A R Y VN +WLGGM+TN+KT+ + + +L++LE+ Sbjct: 65 AAAGKGVLFVGTKKQAQETIREEASRCGMYFVNQRWLGGMLTNYKTIKRRVLRLKELEK- 123 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E +G +KKE + +R++L+R L GI++M LP +FVVD +E++A+ EAR Sbjct: 124 --QEAEGAFEVLSKKEVARLLNERERLERFLGGIKEMDKLPGAVFVVDPRKERIAVAEAR 181 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 182 KLNIPVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISSRIADAVLEG 228 >gi|12722424|gb|AAK04068.1| RpS2 [Pasteurella multocida subsp. multocida str. Pm70] Length = 252 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM +AL ++ Sbjct: 13 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNEALVELTRI 72 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 73 AGNNGKILFVGTKRAATEAVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQ 132 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 133 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 192 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G Sbjct: 193 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAAAAVKEG 236 >gi|218133698|ref|ZP_03462502.1| hypothetical protein BACPEC_01567 [Bacteroides pectinophilus ATCC 43243] gi|217991073|gb|EEC57079.1| hypothetical protein BACPEC_01567 [Bacteroides pectinophilus ATCC 43243] Length = 239 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 150/221 (67%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM++YI+ RN HIIDL ++V + +A + +SD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMQQYIYTHRNGIHIIDLQKSVGKVDEAYKAVSDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D + A+R + VN +WLGGM+TN+ T+ + I KL ++E + KE+ Sbjct: 61 TILFVGTKKQAQDAIATEAQRCGMFYVNERWLGGMLTNFTTIQKRIAKLHEIETM--KED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE +E++ +KL++ L GI++M LPD +FVVD +E++ IQEA L IP+ Sbjct: 119 GTFDVLPKKEVALLEKELEKLQKNLGGIKEMKKLPDAIFVVDPKKERICIQEAHALGIPL 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 179 IGIVDTNCDPDELDYVIPGNDDAIRAVKLIVSKMADAVIEA 219 >gi|161723302|ref|NP_246923.2| 30S ribosomal protein S2 [Pasteurella multocida subsp. multocida str. Pm70] gi|38258886|sp|P57982|RS2_PASMU RecName: Full=30S ribosomal protein S2 Length = 240 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM +AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNEALVELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 AGNNGKILFVGTKRAATEAVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAAAAVKEG 224 >gi|241896315|ref|ZP_04783611.1| ribosomal protein S2 [Weissella paramesenteroides ATCC 33313] gi|241870295|gb|EER74046.1| ribosomal protein S2 [Weissella paramesenteroides ATCC 33313] Length = 281 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 157/240 (65%), Gaps = 5/240 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++ +A + D A Sbjct: 27 ISMKQLLEAGVHFGHQTRRWNPKMSDYIFTERNGIYIIDLQKTVKLVDQAYNYVRDAAAD 86 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A R+ + VN +WLGG +TNWKT+ I +L++L + + Sbjct: 87 GATVLFVGTKKQAQDSIAEEATRANMFYVNHRWLGGTLTNWKTIQARIARLKELRAM--E 144 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R+KL + L GI DM +PDLMF+VD ++E+LA+QEA +L I Sbjct: 145 EDGTFDRLPKKEVSLLIKQREKLDKFLGGIADMPKIPDLMFIVDPHKEQLAVQEAHKLNI 204 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G + + AD + G+ Sbjct: 205 PIVAMVDTNADPDQIDVKIPSNDDAIRAVRLITSKMADAIIEGNQGEDAVEEADFAAEGD 264 >gi|251797411|ref|YP_003012142.1| ribosomal protein S2 [Paenibacillus sp. JDR-2] gi|247545037|gb|ACT02056.1| ribosomal protein S2 [Paenibacillus sp. JDR-2] Length = 232 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 152/221 (68%), Gaps = 5/221 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVRSVAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V E A+R + +N +WLGG +TN++T+ + I +LR LE+ E Sbjct: 65 GTMLFVGTKKQAQDSVKEEAERCGNFYINQRWLGGTLTNFQTIQKRIDRLRQLEKW--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++D+L++ L GI+ M GLP +F++D +E++A+ EAR+L IP Sbjct: 123 DGTFEVLPKKEVIILNKEKDRLEKFLGGIKGMKGLPSALFIIDPRKERIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IV +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVE 223 >gi|154482596|ref|ZP_02025044.1| hypothetical protein EUBVEN_00263 [Eubacterium ventriosum ATCC 27560] gi|149736621|gb|EDM52507.1| hypothetical protein EUBVEN_00263 [Eubacterium ventriosum ATCC 27560] Length = 268 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A Sbjct: 30 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAVSDIAAE 89 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + V A+R Y VN +WLGGM+TN+KT+ I++L+D+E++ Sbjct: 90 GGTILFVGTKKQAQEAVQTEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKDIEKM--A 147 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE +NI+++ DKL++ L GI+DM +PD +FVVD +EK+ +QEA L I Sbjct: 148 EDGTFDVLPKKEVVNIKKEWDKLEKNLGGIKDMKRIPDAIFVVDPKKEKICVQEAHSLGI 207 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 208 TLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 249 >gi|315612184|ref|ZP_07887099.1| 30S ribosomal protein S2 [Streptococcus sanguinis ATCC 49296] gi|315315745|gb|EFU63782.1| 30S ribosomal protein S2 [Streptococcus sanguinis ATCC 49296] Length = 286 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 31 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 90 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 91 DAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 147 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 148 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 208 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 251 >gi|241889646|ref|ZP_04776944.1| ribosomal protein S2 [Gemella haemolysans ATCC 10379] gi|241863268|gb|EER67652.1| ribosomal protein S2 [Gemella haemolysans ATCC 10379] Length = 244 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 150/221 (67%), Gaps = 7/221 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + +G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSVADQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ E Sbjct: 65 GKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRITEIEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + + ++ DKL + L GIR+M G+PD +FVVD +E AI EA++L I Sbjct: 122 ADGVFEVLPKKEVIELRKEYDKLVKFLGGIREMKGMPDAIFVVDPKKEHNAIAEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 P+V +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 182 PVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTAKMADAFV 222 >gi|237800144|ref|ZP_04588605.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023001|gb|EGI03058.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 246 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/226 (46%), Positives = 149/226 (65%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++G FGH+ WNP M +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGCHFGHQKRYWNPLMAKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E+ F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 119 IQSEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP++ +VDTNS+P +DY+IPGNDD+ R+I L+ +A A I G Sbjct: 179 LGIPVIGIVDTNSSPQGIDYIIPGNDDAIRAIQLYMGSMADAVIRG 224 >gi|300361912|ref|ZP_07058089.1| 30S ribosomal protein S2 [Lactobacillus gasseri JV-V03] gi|300354531|gb|EFJ70402.1| 30S ribosomal protein S2 [Lactobacillus gasseri JV-V03] Length = 261 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 112/258 (43%), Positives = 159/258 (61%), Gaps = 5/258 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + G Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ E Sbjct: 65 GVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L IP Sbjct: 123 DGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A + Sbjct: 183 VVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMADKA 242 Query: 244 VVHSKEGMQLEEDSQSSE 261 + + +EE + SE Sbjct: 243 AAENGDEESIEEVVEKSE 260 >gi|293364491|ref|ZP_06611216.1| 30S ribosomal protein S2 [Streptococcus oralis ATCC 35037] gi|291316999|gb|EFE57427.1| 30S ribosomal protein S2 [Streptococcus oralis ATCC 35037] Length = 286 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 31 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 90 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 91 DAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 147 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 148 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 208 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 251 >gi|260583808|ref|ZP_05851556.1| 30S ribosomal protein S2 [Granulicatella elegans ATCC 700633] gi|260158434|gb|EEW93502.1| 30S ribosomal protein S2 [Granulicatella elegans ATCC 700633] Length = 256 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 152/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLVDDAYNYMREVAQD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA D V + A R+ QY VN +WLGGM+TNW T+ I +L+ ++E+ + Sbjct: 64 GGIALFVGTKKQAQDAVKDEAIRTGQYYVNHRWLGGMLTNWDTIQTRINRLKKIKEM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++ DKL++ L GI+DM +PD+MF+VD +E++A+QEA +L I Sbjct: 122 EDGTFDVLPKKEVGVLLKELDKLEKYLGGIKDMPRIPDVMFIVDPRKERIAVQEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A ++G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLIVAKMADAFVEG 224 >gi|81428876|ref|YP_395876.1| 30S ribosomal protein S2 [Lactobacillus sakei subsp. sakei 23K] gi|123728636|sp|Q38W64|RS2_LACSS RecName: Full=30S ribosomal protein S2 gi|78610518|emb|CAI55569.1| 30S ribosomal protein S2 [Lactobacillus sakei subsp. sakei 23K] Length = 264 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 111/256 (43%), Positives = 169/256 (66%), Gaps = 15/256 (5%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+++IF ERN +IIDL +TV M+ A + + A Sbjct: 4 LSMKQLLEAGVHFGHQTRRWNPKMKKFIFTERNGIYIIDLQKTVRMVDDAYDFVKEEAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G LFV TK QA D + E + R+ QY VN +WLGG +TNW T+ + I++L++++ + Sbjct: 64 EGVFLFVGTKKQAQDAIAEESVRAGQYFVNHRWLGGTLTNWDTIQKRIKRLKEIKAM--D 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE ++++++KL++ L GI DM +PD+MFVVD +E++AI+EA++L I Sbjct: 122 EDGTFERLPKKEVALLKKQQEKLEKFLGGIEDMPRIPDVMFVVDPRKERIAIKEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ------HSYMGAD 236 P+VA+VDTNS+PD +D +IP NDD+ R++ L +A A I+G RQ + A+ Sbjct: 182 PVVAMVDTNSDPDDIDVIIPSNDDAIRAVRLITAKMADAIIEG--RQGEDDVEEATFAAE 239 Query: 237 TKSAG--ETVVHSKEG 250 KSA E +V + EG Sbjct: 240 NKSADSMEEIVEAVEG 255 >gi|169333876|ref|ZP_02861069.1| hypothetical protein ANASTE_00262 [Anaerofustis stercorihominis DSM 17244] gi|169259441|gb|EDS73407.1| hypothetical protein ANASTE_00262 [Anaerofustis stercorihominis DSM 17244] Length = 243 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 153/222 (68%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GVQFGH+ WNPKM+++IF ERN +IIDL QTV ++ A + + GG Sbjct: 6 MKQLLEAGVQFGHQTRRWNPKMKKFIFTERNGIYIIDLQQTVGLVDDACKFVRGIAEEGG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILF+ TK QA D V A +S + +N +WLGG +TN++T+S+ I++L +L E+ E Sbjct: 66 EILFIGTKKQAQDAVKTEAIKSGSHFINQRWLGGTLTNFQTISKRIKRLHELNEM---EQ 122 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KKE + ++ +RDKL++ L GI+ M LP +FV+D +E++AI EA++L IP Sbjct: 123 DGTFDVLPKKEVILLKNQRDKLEKFLGGIKHMEKLPSALFVIDPKKERIAIAEAKKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DY IPGNDD+ R+++L +A+A ++G Sbjct: 183 IVAIVDTNCDPDEIDYPIPGNDDAIRAVSLIASTMANAILEG 224 >gi|257460586|ref|ZP_05625687.1| ribosomal protein S2 [Campylobacter gracilis RM3268] gi|257441917|gb|EEV17059.1| ribosomal protein S2 [Campylobacter gracilis RM3268] Length = 265 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 151/225 (67%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A G Sbjct: 3 TMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ V+ +WLGGM+TN+ T+ QSI+KL +E + E Sbjct: 63 KTILFVGTKKQAGATLKEYAEKCGMPYVSHRWLGGMLTNFSTIKQSIRKLEVIETM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL+ L GIR+M GLPD++FV+D +EK+A+ EA RL++ Sbjct: 120 EDGSINLLTKKEALMLRRKKEKLELYLGGIRNMKGLPDMIFVIDVVKEKIAVAEANRLKM 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P++A +DTN +PD+VD+ IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVIAPLDTNCDPDVVDFPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|322388456|ref|ZP_08062059.1| 30S ribosomal protein S2 [Streptococcus infantis ATCC 700779] gi|321140769|gb|EFX36271.1| 30S ribosomal protein S2 [Streptococcus infantis ATCC 700779] Length = 287 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 31 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 90 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 91 DAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 147 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 148 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 208 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 251 >gi|15639594|ref|NP_219044.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025832|ref|YP_001933604.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum SS14] gi|6094174|sp|O83615|RS2_TREPA RecName: Full=30S ribosomal protein S2 gi|238689332|sp|B2S3J6|RS2_TREPS RecName: Full=30S ribosomal protein S2 gi|3322900|gb|AAC65579.1| ribosomal protein S2 (rpsB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018407|gb|ACD71025.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum SS14] gi|291059977|gb|ADD72712.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum str. Chicago] Length = 291 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 98/219 (44%), Positives = 158/219 (72%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI+ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A ++ TV+ G Sbjct: 5 TIKNLLESGVHFGHQVRRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDMVRRTVSSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK Q+ + + A+R + V ++WLGGM+TN+ T+ +S+ +L+ +E + ++ Sbjct: 65 KSVLFVGTKKQSQQTIAKEAQRCGMFYVTNRWLGGMLTNFSTIRKSLSRLKKIERMEIDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE ++ ++ KL++ L GI++M LP ++F++DT +E +AI+EARR+ IPIV Sbjct: 125 TFEHLSKKEVASLRKEHAKLEKNLGGIKEMKELPGVVFIIDTRKETIAIREARRVGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 AVVDTN NP+ +DY IPGNDD+ R+I+LF L+A+A ++ Sbjct: 185 AVVDTNCNPEGIDYPIPGNDDAIRAISLFTQLIANAVME 223 >gi|225619456|ref|YP_002720703.1| 30S ribosomal protein S2 [Brachyspira hyodysenteriae WA1] gi|225214275|gb|ACN83009.1| 30S ribosomal protein S2 [Brachyspira hyodysenteriae WA1] Length = 266 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 100/219 (45%), Positives = 158/219 (72%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH W+P+M+ +IF ERN+ +IIDL +T+ ++KA + + + GG Sbjct: 1 MKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAHEAVKEMARNGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +LFV TK QAS + EAA++ Y VN++WLGGM+TN+ T+ +SI +L+ +E E ++ Sbjct: 61 NVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKKIEKEEVDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + + +++++L++ GI+DM LPD++FV+D +E +A+ EAR+L IP+VA Sbjct: 121 FDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAIAVSEARKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN NP+++D+ IPGNDD+ R+I+LF +VASA I+G Sbjct: 181 VVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEG 219 >gi|260890245|ref|ZP_05901508.1| ribosomal protein S2 [Leptotrichia hofstadii F0254] gi|260859865|gb|EEX74365.1| ribosomal protein S2 [Leptotrichia hofstadii F0254] Length = 284 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 153/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ + A + + Sbjct: 27 ITMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLGATEAAYEFVRQISEE 86 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--L 123 GG++LFV TK QA + + E A+R+ + VN +WLGG++TN +T+ + +++L++LEE+ Sbjct: 87 GGKVLFVGTKKQAQEAIKEEAERAGGFYVNHRWLGGLLTNLETIKKRVKRLKELEEMDAD 146 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++ +TKKE + ++ KL + + GI++M LP +FVVD +E LA++EA++L IP Sbjct: 147 GTLDEAYTKKEAGLLRKEMAKLSKNIGGIKEMNTLPAALFVVDIKKEFLALEEAKKLGIP 206 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++A++DTN +PDLV Y IP NDD+ RS+ LF ++A+AAI+G Sbjct: 207 VIALIDTNVDPDLVTYKIPANDDAIRSVKLFAQVIANAAIEG 248 >gi|239815580|ref|YP_002944490.1| 30S ribosomal protein S2 [Variovorax paradoxus S110] gi|259495228|sp|C5CKS0|RS2_VARPS RecName: Full=30S ribosomal protein S2 gi|239802157|gb|ACS19224.1| ribosomal protein S2 [Variovorax paradoxus S110] Length = 250 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/253 (41%), Positives = 165/253 (65%), Gaps = 6/253 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q A++ A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V A+R+ V+++WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LDSLSKKEQLTFTREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A I+G ++S G K+ E Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEG---RNSATGDVVKAIAEG--- 237 Query: 247 SKEGMQLEEDSQS 259 S E +++EE + + Sbjct: 238 SDEFVEVEEGASA 250 >gi|311110894|ref|ZP_07712291.1| ribosomal protein S2 [Lactobacillus gasseri MV-22] gi|209573705|sp|Q044D0|RS2_LACGA RecName: Full=30S ribosomal protein S2 gi|311066048|gb|EFQ46388.1| ribosomal protein S2 [Lactobacillus gasseri MV-22] Length = 261 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 112/258 (43%), Positives = 159/258 (61%), Gaps = 5/258 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + G Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIRMLDDAYNYVKAVAQDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ E Sbjct: 65 GVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L IP Sbjct: 123 DGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A + Sbjct: 183 VVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMADKA 242 Query: 244 VVHSKEGMQLEEDSQSSE 261 + + +EE + SE Sbjct: 243 AAENDDEESIEEVVEKSE 260 >gi|160900380|ref|YP_001565962.1| 30S ribosomal protein S2 [Delftia acidovorans SPH-1] gi|238687161|sp|A9BMN2|RS2_DELAS RecName: Full=30S ribosomal protein S2 gi|160365964|gb|ABX37577.1| ribosomal protein S2 [Delftia acidovorans SPH-1] Length = 250 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 151/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q A + + + G Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAQKFVKQLASNG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V A+R+ V+ +WLGGM+TN+KTV SI++L++++ Sbjct: 64 GTILMVGTKRQAREMVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP+V Sbjct: 124 LEAMSKKEQLMFVRELEKLEKDIGGIQDMNSLPDAIFVIDVGFHKIAVAEAKKLGIPLVG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N NP+ +DYVIPGNDDS++++ L+ +A A ++G A Sbjct: 184 VVDSNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGRA 224 >gi|317484680|ref|ZP_07943581.1| ribosomal protein S2 [Bilophila wadsworthia 3_1_6] gi|316924036|gb|EFV45221.1| ribosomal protein S2 [Bilophila wadsworthia 3_1_6] Length = 261 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV + + A I +TVA G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYRTAHDKIVETVANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 GR+LF+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +SI++L+ LE + + Sbjct: 65 GRVLFIGTKRQAQEAVAAEAGRAGQFHVTNRWMGGTLTNFATIQKSIERLKKLEAMFADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L ++R+ KL+ L GI+DM LP L F++D NRE++A++E R+L IPIV Sbjct: 125 SVNRYQKKEILTLQREMAKLELTLGGIKDMDRLPQLAFIIDPNREEIAVKECRKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 AV DTN +PD++DY+IPGNDD+ R+I LF +A A ++G A Sbjct: 185 AVTDTNCDPDVIDYIIPGNDDAIRAIKLFVTAMAEACLEGEA 226 >gi|241764757|ref|ZP_04762766.1| ribosomal protein S2 [Acidovorax delafieldii 2AN] gi|241365747|gb|EER60419.1| ribosomal protein S2 [Acidovorax delafieldii 2AN] Length = 250 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 150/221 (67%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM YIF RN HII+L +++P+ Q+A + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFAKQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + + A+R+ V+ +WLGGM+TN+KTV SI++L+D++ L Sbjct: 64 GTILMVGTKRQAREILATEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQLETG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ +KL++ + GI+DM LPD +F++D K+A+ EA++L IP++ Sbjct: 124 LDSLSKKEQLTFSREIEKLEKDIGGIQDMAALPDAIFIIDVGFHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ +DYVIPGNDDS++++ L+ +A A I+G A Sbjct: 184 VVDTNHSPEGIDYVIPGNDDSAKAVTLYARGIADAIIEGRA 224 >gi|312127154|ref|YP_003992028.1| 30S ribosomal protein S2 [Caldicellulosiruptor hydrothermalis 108] gi|311777173|gb|ADQ06659.1| ribosomal protein S2 [Caldicellulosiruptor hydrothermalis 108] Length = 258 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 160/242 (66%), Gaps = 3/242 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+ +N+ RK +++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G R+ T S+ Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEG--REGEQFTPATTSSQ 238 Query: 242 ET 243 ET Sbjct: 239 ET 240 >gi|297584067|ref|YP_003699847.1| 30S ribosomal protein S2 [Bacillus selenitireducens MLS10] gi|297142524|gb|ADH99281.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] Length = 242 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVRKVDEAFNFVRDLAAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA D V E A+R Y +N +WLGG +TN++T+ + I +L+++E++ + Sbjct: 64 GGTMLFVGTKKQAQDSVAEEAERCGMYYINQRWLGGTLTNFETIRKRINRLKEIEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I+++ D+L++ L GI++M LPD +F++D +E++A+ EA +L I Sbjct: 122 EDGTFDVLPKKEVVLIKKEWDRLEKFLGGIKEMTRLPDALFIIDPRKERIAVAEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 182 PIVGIVDTNCDPDEIDYVIPGNDDAIRAVRLLTAKMADAIIEA 224 >gi|332527870|ref|ZP_08403907.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2] gi|332112447|gb|EGJ12240.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2] Length = 247 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 149/221 (67%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+GV FGH+ WNPKM YI+ RN HII+L +T P+ + A++ + AR Sbjct: 4 SMREMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTQPLFEDAMKFVRQLSARR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL + TK QA + + A+R V+ +WLGGM+TN+KTV S++KL+D++ Sbjct: 64 GTILMIGTKRQAREVIAMEAQRCGMPYVDQRWLGGMLTNFKTVKGSLKKLKDMQATKEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ KL++ + GI+DMG LPD MFV+D K+A+ EA++L IP++ Sbjct: 124 MEQMIKKEALLFDRELVKLEKDIGGIQDMGALPDAMFVIDVGYHKIAVAEAKKLGIPVIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P +DYVIPGNDDS++++AL+ VA A ++G A Sbjct: 184 VVDTNHSPVGIDYVIPGNDDSAKAVALYARAVADAVLEGRA 224 >gi|259046752|ref|ZP_05737153.1| 30S ribosomal protein S2 [Granulicatella adiacens ATCC 49175] gi|259036648|gb|EEW37903.1| 30S ribosomal protein S2 [Granulicatella adiacens ATCC 49175] Length = 251 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 106/221 (47%), Positives = 151/221 (68%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ A + + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLVDDAYNYMHEVAENGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 LFV TK QA D V + A RS QY VN +WLGG +TNW T+ I++L+ ++E+ +E+ Sbjct: 61 IALFVGTKKQAQDAVKDEAIRSGQYYVNHRWLGGTLTNWDTIQTRIKRLKKIKEM--QED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++ DKL++ L GI+DM +PD+MF+VD +E++A+QEA +L IPI Sbjct: 119 GTFEVLPKKEVGILLKELDKLEKYLGGIKDMPRIPDVMFIVDPRKERIAVQEAHKLNIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 179 VAMVDTNCDPDEIDVVIPSNDDAIRAVKLIVAKMADAFIEG 219 >gi|163849094|ref|YP_001637138.1| 30S ribosomal protein S2 [Chloroflexus aurantiacus J-10-fl] gi|222527067|ref|YP_002571538.1| 30S ribosomal protein S2 [Chloroflexus sp. Y-400-fl] gi|209573650|sp|A9WAF9|RS2_CHLAA RecName: Full=30S ribosomal protein S2 gi|254764467|sp|B9LEM0|RS2_CHLSY RecName: Full=30S ribosomal protein S2 gi|163670383|gb|ABY36749.1| ribosomal protein S2 [Chloroflexus aurantiacus J-10-fl] gi|222450946|gb|ACM55212.1| ribosomal protein S2 [Chloroflexus sp. Y-400-fl] Length = 238 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 110/231 (47%), Positives = 152/231 (65%), Gaps = 2/231 (0%) Query: 2 ALPQF-TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 ALP+ TIR+LLE+G FGH WNPKM+ YIF RN HIIDL +TV L +A Q I+ Sbjct: 4 ALPRVVTIRELLEAGAHFGHPTNRWNPKMKPYIFTARNGIHIIDLQKTVTGLSRAYQFIT 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ARG ++LFV TK QA + VME A RS Q+ +N +WLGG +TN+ T+ + ++ L DLE Sbjct: 64 ELTARGEKVLFVGTKKQAQEAVMEEAVRSGQFYINQRWLGGTLTNFATIKRRLKLLSDLE 123 Query: 121 ELLNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E ++ + TK E +E K +L R G++ M LP +F++D +E+LA++EA + Sbjct: 124 EQRDRGDFARLTKAEAAKLEEKIVRLNRVFAGLKGMDRLPGAVFIIDPRKEELAVREAVK 183 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +PD +DYVIP NDD+ R I L +A AAI+G R+ Sbjct: 184 EGIPIVAMVDTNCDPDPIDYVIPCNDDAIRGIRLMAGKIADAAIEGTRRRE 234 >gi|114332001|ref|YP_748223.1| 30S ribosomal protein S2 [Nitrosomonas eutropha C91] gi|122313295|sp|Q0AEH4|RS2_NITEC RecName: Full=30S ribosomal protein S2 gi|114309015|gb|ABI60258.1| SSU ribosomal protein S2P [Nitrosomonas eutropha C91] Length = 251 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 110/224 (49%), Positives = 147/224 (65%), Gaps = 9/224 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM YIF +RN HI++L T+ M + AL A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMFRDALDYARRLAANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL---- 122 ILFV TK QA D V E A R VN +WLGGM+TN+KT+ QSI++L+D+E++ Sbjct: 64 ETILFVGTKRQARDIVKEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQDG 123 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LNK KKE L+ +R+ +KL +L GI++M GLPD MFV+D +K I EA +L Sbjct: 124 TLNK----LVKKEALDFQRELEKLNASLGGIKEMKGLPDAMFVIDVGYQKGTIIEANKLG 179 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V VVDTN NP + YVIPGNDDSS++I L+ +A A ++G Sbjct: 180 IPVVGVVDTNHNPAGIQYVIPGNDDSSQAIRLYARAMADAILEG 223 >gi|260881835|ref|ZP_05405336.2| ribosomal protein S2 [Mitsuokella multacida DSM 20544] gi|260847798|gb|EEX67805.1| ribosomal protein S2 [Mitsuokella multacida DSM 20544] Length = 254 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 150/221 (67%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + Sbjct: 17 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYAFLRSVAEE 76 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +LFV TK QA + + E A R+ Q+ VN +WLGGMMTN++T+ + I +L++LE + + Sbjct: 77 GKSVLFVGTKKQAQEAIKEEATRAGQFYVNERWLGGMMTNFRTIQKRIARLKELEAMEAD 136 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE + + +KL++ L GI++M LP +F+VD +E++A+ EAR+L IPI Sbjct: 137 GTFEVLTKKEVQGLRHEMEKLEQYLGGIKEMNKLPGALFIVDPRKERIAVAEARKLNIPI 196 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 197 VAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGRMADAVLEG 237 >gi|116629458|ref|YP_814630.1| 30S ribosomal protein S2 [Lactobacillus gasseri ATCC 33323] gi|116095040|gb|ABJ60192.1| SSU ribosomal protein S2P [Lactobacillus gasseri ATCC 33323] Length = 271 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 112/258 (43%), Positives = 159/258 (61%), Gaps = 5/258 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + G Sbjct: 15 TMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIRMLDDAYNYVKAVAQDG 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ E Sbjct: 75 GVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM--SE 132 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L IP Sbjct: 133 DGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILGIP 192 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A + Sbjct: 193 VVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMADKA 252 Query: 244 VVHSKEGMQLEEDSQSSE 261 + + +EE + SE Sbjct: 253 AAENDDEESIEEVVEKSE 270 >gi|145589632|ref|YP_001156229.1| ribosomal protein S2 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189045005|sp|A4SYV1|RS2_POLSQ RecName: Full=30S ribosomal protein S2 gi|145048038|gb|ABP34665.1| SSU ribosomal protein S2P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 249 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 153/224 (68%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+G FGH+ W+PKM +IF RN HII+L +T+PM Q AL+ + Sbjct: 4 TMRQMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFAKQVASNR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK Q+ + + E A R+ ++S+WLGG +TN+KTV S+++L+D+ + KE Sbjct: 64 GTILFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMA--VAKE 121 Query: 127 N---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L +R DKL++AL GI+D+ G+PD +FVVD K+AI EA +L IP Sbjct: 122 AGDWEKLSKKEALTNDRDLDKLQKALGGIQDLNGVPDAIFVVDVGYHKIAITEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++AVVDTN +P+ VDY+IPGNDDSS+++ L+ +A A ++G A Sbjct: 182 VIAVVDTNHSPEGVDYIIPGNDDSSKAVLLYARGIADAILEGKA 225 >gi|315222789|ref|ZP_07864675.1| ribosomal protein S2 [Streptococcus anginosus F0211] gi|315188092|gb|EFU21821.1| ribosomal protein S2 [Streptococcus anginosus F0211] Length = 279 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 23 ISMKQLLEAGVHFGHQTRRWNPKMSKYIFTERNGIHVIDLQQTVKFADQAYDFMRDAAAN 82 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW+T+ + + +L++++ + Sbjct: 83 DAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWETIQKRVARLKEIKRM--- 139 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L Sbjct: 140 EEDGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLG 199 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 200 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEG 243 >gi|323340806|ref|ZP_08081058.1| 30S ribosomal protein S2 [Lactobacillus ruminis ATCC 25644] gi|323091929|gb|EFZ34549.1| 30S ribosomal protein S2 [Lactobacillus ruminis ATCC 25644] Length = 264 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 110/267 (41%), Positives = 171/267 (64%), Gaps = 18/267 (6%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+++IF ERN +IIDL +TV ++ +A + D + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKQFIFTERNGIYIIDLQKTVKLIDEAYDFVKDAASN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D V E AKR QY VN +WLGG +TNW T+ I++L++++ + + Sbjct: 64 DGVVLFVGTKKQAQDAVEEEAKRCGQYYVNHRWLGGTLTNWNTIQTRIKRLKEIKAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++RD+L++ L GI DM +PD++F+VD +E++A++EA++L I Sbjct: 122 EDGTFERLPKKEVALLVKQRDRLQKFLGGIEDMPRIPDILFIVDPRKERIAVKEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G RQ GE Sbjct: 182 PIVAMVDTNADPDEIDVKIPSNDDAIRAVRLITAKMADAVIEG--RQ-----------GE 228 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQE 269 +E + E++S S +++ E Sbjct: 229 DEAPVEEAFKAEDESVDSIEDIVEAVE 255 >gi|89900774|ref|YP_523245.1| 30S ribosomal protein S2 [Rhodoferax ferrireducens T118] gi|123091301|sp|Q21WY9|RS2_RHOFD RecName: Full=30S ribosomal protein S2 gi|89345511|gb|ABD69714.1| SSU ribosomal protein S2P [Rhodoferax ferrireducens T118] Length = 250 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 102/219 (46%), Positives = 150/219 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + S AR Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFASQVSARR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +L V TK QA + V A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTVLMVGTKRQARETVALEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKIQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ KL+R + GI+DM LPD +FV+D K+AI EA++L IP++A Sbjct: 124 LDSLSKKEQLMFARELAKLERDIGGIQDMTVLPDAIFVIDVGFHKIAIAEAKKLGIPLIA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +P+ +DY+IPGNDDSS+++ L+ +A A I+G Sbjct: 184 VVDTNHSPEGIDYIIPGNDDSSKAVILYARGIADAIIEG 222 >gi|251793346|ref|YP_003008074.1| 30S ribosomal protein S2 [Aggregatibacter aphrophilus NJ8700] gi|247534741|gb|ACS97987.1| ribosomal protein S2 [Aggregatibacter aphrophilus NJ8700] Length = 240 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK A+D V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAATDAVQAAALECQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRGREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD +D+VIPGNDD++R+I L+ +A +G Sbjct: 181 IPVFAIVDTNSSPDGIDFVIPGNDDAARAIQLYLSSAVAAIKEG 224 >gi|224476379|ref|YP_002633985.1| 30S ribosomal protein S2 [Staphylococcus carnosus subsp. carnosus TM300] gi|254764490|sp|B9DPG8|RS2_STACT RecName: Full=30S ribosomal protein S2 gi|222420986|emb|CAL27800.1| 30S ribosomal protein S2 [Staphylococcus carnosus subsp. carnosus TM300] Length = 260 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + A+R+ Q+ VN +WLGG++TN+KT+S+ ++++ ++E++ Sbjct: 64 GGKVLFVGTKKQAQESIKNEAERAGQFYVNQRWLGGILTNYKTISKRVKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + I+++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVEIKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEG 224 >gi|253752631|ref|YP_003025772.1| 30S ribosomal protein S2 [Streptococcus suis SC84] gi|253754457|ref|YP_003027598.1| 30S ribosomal protein S2 [Streptococcus suis P1/7] gi|253756390|ref|YP_003029530.1| 30S ribosomal protein S2 [Streptococcus suis BM407] gi|330833591|ref|YP_004402416.1| 30S ribosomal protein S2 [Streptococcus suis ST3] gi|209573685|sp|A4W453|RS2_STRS2 RecName: Full=30S ribosomal protein S2 gi|251816920|emb|CAZ52569.1| 30S ribosomal protein S2 [Streptococcus suis SC84] gi|251818854|emb|CAZ56697.1| 30S ribosomal protein S2 [Streptococcus suis BM407] gi|251820703|emb|CAR47465.1| 30S ribosomal protein S2 [Streptococcus suis P1/7] gi|319759047|gb|ADV70989.1| 30S ribosomal protein S2 [Streptococcus suis JS14] gi|329307814|gb|AEB82230.1| 30S ribosomal protein S2 [Streptococcus suis ST3] Length = 258 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + + Sbjct: 64 DAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEG 224 >gi|319940032|ref|ZP_08014386.1| 30S ribosomal protein S2 [Streptococcus anginosus 1_2_62CV] gi|319810746|gb|EFW07073.1| 30S ribosomal protein S2 [Streptococcus anginosus 1_2_62CV] Length = 260 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 109/258 (42%), Positives = 164/258 (63%), Gaps = 20/258 (7%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKFADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW+T+ + + +L++++ + Sbjct: 64 DAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWETIQKRVARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G RQ G Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEG--RQ-----------G 227 Query: 242 ETVVHSKEGMQLEEDSQS 259 E V S E DSQ+ Sbjct: 228 EDNVESVEAELAATDSQA 245 >gi|116669928|ref|YP_830861.1| 30S ribosomal protein S2 [Arthrobacter sp. FB24] gi|166225237|sp|A0JUP1|RS2_ARTS2 RecName: Full=30S ribosomal protein S2 gi|116610037|gb|ABK02761.1| SSU ribosomal protein S2P [Arthrobacter sp. FB24] Length = 294 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 113/235 (48%), Positives = 163/235 (69%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TVS+ IQ++++LEE+ Sbjct: 61 VAHGGTVLFVGTKKQAQESIAEQATRVGQPYVNQRWLGGMLTNFQTVSKRIQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+ KL+ L GIR++ P ++++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSAYTKKELLLLRRELTKLETNLGGIRNLTKAPSVLWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMG 234 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L +VA A +G IAR G Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVVADAVAEGLIARNQRATG 235 >gi|319948058|ref|ZP_08022232.1| 30S ribosomal protein S2 [Dietzia cinnamea P4] gi|319438297|gb|EFV93243.1| 30S ribosomal protein S2 [Dietzia cinnamea P4] Length = 293 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 160/224 (71%), Gaps = 5/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLL++G FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +TVA Sbjct: 4 ISMKQLLDAGAHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDQAYEFVKETVAH 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA + + E A + VN +WLGGM+TN++TV Q + +L++LE + + Sbjct: 64 GGTVLFVGTKKQAQEAIAEEAAKVGMPYVNQRWLGGMLTNFQTVHQRLLRLKELESM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + GF TKKE L + R+++KL+R L G+RDM +P +++VVDTN+E +A+ EAR+L I Sbjct: 122 QTGGFEGRTKKEILMLTREKNKLERTLGGMRDMSKVPSVVWVVDTNKEHIAVGEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 P+VA++DTN +PD+VDY IP NDD+ RS+ + ++ASA +G+ Sbjct: 182 PVVALLDTNCDPDVVDYPIPANDDAIRSVTVLTRVIASAVAEGL 225 >gi|312131529|ref|YP_003998869.1| ssu ribosomal protein s2p [Leadbetterella byssophila DSM 17132] gi|311908075|gb|ADQ18516.1| SSU ribosomal protein S2P [Leadbetterella byssophila DSM 17132] Length = 284 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 113/269 (42%), Positives = 168/269 (62%), Gaps = 15/269 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LL++GV FGH W+P+M YIF E+N HIIDL+Q++ LQ A + Sbjct: 1 MAQVQYKDLLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNQSLEALQNAQAFLKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +++FVATK QA + V E AKR V +WLGGM+TN+ T+ +S++KL ++E + Sbjct: 61 VRSGRKVMFVATKKQAQEIVSEEAKRLKMPFVTERWLGGMLTNFSTIKKSLKKLSNIERM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 LN E + K+E+L + R++ KL+R L G+ D+ LP +FVVD RE LAI EA+RL Sbjct: 121 LNDEETAKNIAKREKLMLGREKAKLERLLGGVTDLSRLPAALFVVDIKREHLAIAEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+ DTNSNP+LVDY IP NDD+ +SI+L + + +GI + + D ++A Sbjct: 181 GIPVVAMCDTNSNPELVDYAIPANDDAYKSISLITLAIGKSIEEGILERKT----DKENA 236 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +Q EED++ + S +G+E Sbjct: 237 ---------ALQEEEDAKRAVDSAKEGKE 256 >gi|327475253|gb|AEA77221.1| SSU ribosomal protein S2p [Bacillus aquimaris] Length = 235 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 97/234 (41%), Positives = 161/234 (68%), Gaps = 5/234 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYKFVKELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V E A+R+ Y +N +WLGG +TN++T+ + I +L+++E++ + Sbjct: 64 GGKVLFVGTKKQAQESVKEEAERAGMYYINQRWLGGTLTNFETIQKRISRLKEIEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L + L GI+DM LPD +F++D +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMNTLPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 PIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQGEEAAVAAE 235 >gi|329912037|ref|ZP_08275648.1| SSU ribosomal protein S2p (SAe) [Oxalobacteraceae bacterium IMCC9480] gi|327545760|gb|EGF30894.1| SSU ribosomal protein S2p (SAe) [Oxalobacteraceae bacterium IMCC9480] Length = 248 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM YIF RN HI++L +T+ M Q A++ I + Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIVNLEKTLAMYQDAMKYIQQLSSNR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G IL V TK QA + V A R+ V+ +WLGGM+TN+KT+ SI++L+++E + + Sbjct: 64 GTILMVGTKRQAREIVAAEAARAGMPFVDQRWLGGMLTNFKTIKTSIKRLKEMEASIADG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP++ Sbjct: 124 SVEKLSKKEGLMFEREMIKLQKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ V Y+IPGNDDSS++I L+ VA A ++G A Sbjct: 184 GVVDTNHSPEGVTYIIPGNDDSSKAIMLYARGVADAILEGRA 225 >gi|319793983|ref|YP_004155623.1| ribosomal protein s2 [Variovorax paradoxus EPS] gi|315596446|gb|ADU37512.1| ribosomal protein S2 [Variovorax paradoxus EPS] Length = 251 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 98/219 (44%), Positives = 148/219 (67%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q A++ A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V A+R+ V+++WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LDSLSKKEQLTFSREIAKLEKDIGGIQDMAALPDAIFVIDVGFHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A I+G Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEG 222 >gi|71892053|ref|YP_277783.1| 30S ribosomal protein S2 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123734156|sp|Q493D2|RS2_BLOPB RecName: Full=30S ribosomal protein S2 gi|71796159|gb|AAZ40910.1| 30S ribosomal subunit protein S2 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 228 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 106/221 (47%), Positives = 151/221 (68%), Gaps = 5/221 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +IR +L++GV FGH+ WNPKM+ +IF RN HIIDL T M ++AL ++ Sbjct: 1 MENISIRDMLQAGVHFGHQTRYWNPKMKPFIFGVRNKIHIIDLETTSVMFRQALIELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G+ILFV TK AS+ V + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AALKGKILFVGTKRAASESVKKTALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE-- 118 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + ++ F TKKE L + R+ L+ +L GI++MGGLPD +F V E +AI+EA Sbjct: 119 IQSQDGTFKKLTKKEALILNRELINLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEANS 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 L IP+ A+VDTNSNPD +D+VIPGNDD+ R+I L+ +++++ Sbjct: 179 LGIPVFAIVDTNSNPDGIDFVIPGNDDAVRAINLYLNIISN 219 >gi|222100791|ref|YP_002535359.1| 30S ribosomal protein S2 [Thermotoga neapolitana DSM 4359] gi|221573181|gb|ACM23993.1| 30S ribosomal protein S2 [Thermotoga neapolitana DSM 4359] Length = 265 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 108/251 (43%), Positives = 162/251 (64%), Gaps = 9/251 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 +++ T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + Sbjct: 4 LSVAVVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVR 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + G ILFV TK QA + A+R + VN++WLGG++TN+KT+ I KL +LE Sbjct: 64 EKASEGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIDKLIELE 123 Query: 121 ELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 E+ E G KKE+ I R +KL++ L G+++M LPD++++VD +EK+A+ E Sbjct: 124 EM---EQSGKLDELPKKEQSRIRRVLEKLRKNLGGLKEMRKLPDIVYIVDPRKEKIAVAE 180 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 A +L IPIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A A ++G R+ + + + Sbjct: 181 ANKLGIPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIADAYLEG--REGAPLTTE 238 Query: 237 TKSAGETVVHS 247 +S E V Sbjct: 239 EESKVEETVEG 249 >gi|19704941|ref|NP_602436.1| 30S ribosomal protein S2 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296329196|ref|ZP_06871697.1| 30S ribosomal protein S2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|25009203|sp|Q8RIH7|RS2_FUSNN RecName: Full=30S ribosomal protein S2 gi|19712843|gb|AAL93735.1| SSU ribosomal protein S2P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153552|gb|EFG94369.1| 30S ribosomal protein S2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 247 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 153/224 (68%), Gaps = 8/224 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + G Sbjct: 5 SMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ + I+++++LE+L + Sbjct: 65 GKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKKRIERMKELEKL---D 121 Query: 127 NQG-----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 122 AEGILDTDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 182 IPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEG 225 >gi|209573686|sp|A4VXV7|RS2_STRSY RecName: Full=30S ribosomal protein S2 Length = 258 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + + Sbjct: 64 EAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEG 224 >gi|152991910|ref|YP_001357631.1| 30S ribosomal protein S2 [Sulfurovum sp. NBC37-1] gi|166226762|sp|A6Q715|RS2_SULNB RecName: Full=30S ribosomal protein S2 gi|151423771|dbj|BAF71274.1| 30S ribosomal protein S2 [Sulfurovum sp. NBC37-1] Length = 344 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 109/239 (45%), Positives = 156/239 (65%), Gaps = 3/239 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+++IF R N +IIDL +T+ + V+ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKFIFGARKNIYIIDLQKTLRYFKYTYNVVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA V E A+R+ V ++WLGGM+TN+ T+ +SI+KL +E++ N Sbjct: 63 QTVLFVGTKKQARQAVKEHAERAGMPYVATRWLGGMLTNYPTMKKSIRKLEIIEQMEENG 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L + RK++KL L+G R M LPD+MFV+D +E +A++EARRL + ++ Sbjct: 123 QLDMLTKKEALMLLRKKEKLSSYLEGFRYMKKLPDMMFVIDAVKENIAVKEARRLGMKVI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS--AGE 242 A +DTN +PD++DY IPGNDD+ RSI LFC +A A I+G A G + + AGE Sbjct: 183 APLDTNCDPDVIDYPIPGNDDAIRSINLFCKEMADAIIEGKAAYAEANGGEAEEVPAGE 241 >gi|159901472|ref|YP_001547719.1| 30S ribosomal protein S2 [Herpetosiphon aurantiacus ATCC 23779] gi|209573654|sp|A9B458|RS2_HERA2 RecName: Full=30S ribosomal protein S2 gi|159894511|gb|ABX07591.1| ribosomal protein S2 [Herpetosiphon aurantiacus ATCC 23779] Length = 255 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 108/226 (47%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ LLE+GV FGH+ WNPKM +IF +RN HIIDL QTV LQ A + ++D VA G Sbjct: 11 SLKALLEAGVHFGHQTKRWNPKMRPFIFTDRNGIHIIDLQQTVTSLQSAYRFVADAVAGG 70 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G++LFV TK QA + V + A RS Q V +W+GG++TN+ T+ + +Q L DLE ++ Sbjct: 71 GKVLFVGTKKQAQEAVRDEATRSNQLYVTQRWMGGLLTNFSTIKRRLQFLHDLEARRDRG 130 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E TK E L +E + KL R GI+ M LP MFV+D ++E LAI EA++L IP+V Sbjct: 131 EFNLVTKAEALKLEDEIVKLNRVFGGIKTMERLPAAMFVIDPHKETLAISEAKKLGIPVV 190 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 A+VDTN +PD +DY IP NDD+ R+I L +A AA++G R+ S Sbjct: 191 AMVDTNCDPDPIDYPIPSNDDAIRAIRLMAGKIADAALEGQNRRQS 236 >gi|315635026|ref|ZP_07890307.1| 30S ribosomal protein S2 [Aggregatibacter segnis ATCC 33393] gi|315476288|gb|EFU67039.1| 30S ribosomal protein S2 [Aggregatibacter segnis ATCC 33393] Length = 240 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNAALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK A+D V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAATDAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ +A +G Sbjct: 181 IPVFAIVDTNSSPDGVDFVIPGNDDAARAIQLYLSSAVAAIKEG 224 >gi|58337547|ref|YP_194132.1| 30S ribosomal protein S2 [Lactobacillus acidophilus NCFM] gi|227904188|ref|ZP_04021993.1| 30S ribosomal protein S2 [Lactobacillus acidophilus ATCC 4796] gi|75507581|sp|Q5FJM3|RS2_LACAC RecName: Full=30S ribosomal protein S2 gi|58254864|gb|AAV43101.1| 30s ribosomal proteinS2 [Lactobacillus acidophilus NCFM] gi|227868207|gb|EEJ75628.1| 30S ribosomal protein S2 [Lactobacillus acidophilus ATCC 4796] Length = 258 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + G Sbjct: 6 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAEDG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ E Sbjct: 66 GVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVRRLKQLKEM--SE 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP Sbjct: 124 DGTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Sbjct: 184 VVAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIIEG 225 >gi|304404279|ref|ZP_07385941.1| ribosomal protein S2 [Paenibacillus curdlanolyticus YK9] gi|304347257|gb|EFM13089.1| ribosomal protein S2 [Paenibacillus curdlanolyticus YK9] Length = 232 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 151/221 (68%), Gaps = 5/221 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + +A + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVDEAYNFVKSVAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D V E A R + +N +WLGG +TN++T+ + I +L+ LE+ +E Sbjct: 65 GTVLFVGTKKQAQDSVKEEAARCGNFYINQRWLGGTLTNFQTIQKRIDRLKQLEKW--EE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++D+L++ L GI+ M GLP +F++D +E++A+ EAR+L IP Sbjct: 123 DGTFNVLPKKEVIILRKEKDRLEKFLGGIKGMKGLPSALFIIDPRKERIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IV +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVE 223 >gi|160933258|ref|ZP_02080647.1| hypothetical protein CLOLEP_02104 [Clostridium leptum DSM 753] gi|156868332|gb|EDO61704.1| hypothetical protein CLOLEP_02104 [Clostridium leptum DSM 753] Length = 248 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A I + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVRKLEEAYNFIRELSENG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D V E A+R+ Y VN++WLGGMMTN+ T+ I +LR L + +E Sbjct: 65 ESVLFVGTKKQAQDSVREEAERAGAYFVNARWLGGMMTNFTTIRHRIDRLRQLRAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ + +KL++ + GI+DM LP +F+VD +E++A+ EA++L IP Sbjct: 123 DGTFDLLPKKEVIKLKLEIEKLEKFMGGIKDMKKLPGALFIVDPRKERIAVAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R++ L +A+A I+G Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISATMANAIIEG 224 >gi|225027217|ref|ZP_03716409.1| hypothetical protein EUBHAL_01473 [Eubacterium hallii DSM 3353] gi|224955446|gb|EEG36655.1| hypothetical protein EUBHAL_01473 [Eubacterium hallii DSM 3353] Length = 265 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 152/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A I D VA Sbjct: 26 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYNAIRDCVAN 85 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 86 GGKILFVGTKKQAQDSIKNEAERCGMYYVNQRWLGGMLTNFKTIQSRIAQLKKIEAM--- 142 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE +N++++++KL++ L GI++M +PD++FVVD +E++ IQEA L Sbjct: 143 EADGTFDVLPKKEVINLKKQQEKLEKNLGGIKEMQDIPDMIFVVDPRKERICIQEAETLG 202 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+G Sbjct: 203 IPLVGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEG 246 >gi|94263229|ref|ZP_01287046.1| Ribosomal protein S2 [delta proteobacterium MLMS-1] gi|93456447|gb|EAT06567.1| Ribosomal protein S2 [delta proteobacterium MLMS-1] Length = 270 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 150/223 (67%), Gaps = 1/223 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P ++R++LE+G+ FGH+ WNPKM+ YIF RN +II+L +T+P+ Q+A + ++ Sbjct: 7 PSISMREMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFQRATEYVARKA 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A+GG ILFV TK QA D V E A+R Y VN +WLGGM+TN +T+ +S+ +L+ + Sbjct: 67 AKGGSILFVGTKRQAQDIVREEAERCGMYFVNHRWLGGMLTNHQTIKKSVDRLKSYTSMQ 126 Query: 124 NKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + KKE + I+++ KL+R L GI++M LP +FVVD RE +A+ EA RL + Sbjct: 127 EDGSIHRYKKKEIMMIQKETLKLERNLGGIKEMKSLPAAIFVVDPKREDIAVTEANRLGV 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+ DTN +P +DY+IPGNDD+ +SI L C +A A + G Sbjct: 187 PVVAIADTNCDPTGIDYLIPGNDDAIKSIRLVCSKLADAILAG 229 >gi|291549950|emb|CBL26212.1| SSU ribosomal protein S2P [Ruminococcus torques L2-14] Length = 249 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 150/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I++L+D+E + Sbjct: 64 GGTVLFVGTKKQAQDAIKAEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKDIERM--A 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I+++ KL++ L GI+DM LPD +F+VD +E++ +QEA L I Sbjct: 122 EDGTFEVLPKKEVIEIKKEWTKLEKNLGGIKDMKKLPDAIFIVDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 182 PLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 223 >gi|310659009|ref|YP_003936730.1| 30S ribosomal protein S2 [Clostridium sticklandii DSM 519] gi|308825787|emb|CBH21825.1| 30S ribosomal subunit protein S2 [Clostridium sticklandii] Length = 248 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A I + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKIEEAYSFIREVAETG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA D + E A+RS Y VN +WLGGM+TN++T+ + I +LR+LE++ +E Sbjct: 65 KPILFVGTKKQAQDSIKEEAERSGMYYVNERWLGGMLTNYQTIKKRIDRLRELEKM--QE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + +++KL++ L+GI+DM +P +F+VD +E++A++EA +L IP Sbjct: 123 DGTFDVLPKKEVIQLMNEKEKLEKYLNGIKDMPEVPGAIFIVDPRKERIAVKEAHKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V +VDTN +PD +D+ IPGNDD+ R++ L ++ A I+ Sbjct: 183 VVGIVDTNCDPDEIDFPIPGNDDAIRAVKLIASTISQAIIEA 224 >gi|303325621|ref|ZP_07356064.1| ribosomal protein S2 [Desulfovibrio sp. 3_1_syn3] gi|302863537|gb|EFL86468.1| ribosomal protein S2 [Desulfovibrio sp. 3_1_syn3] Length = 263 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 110/243 (45%), Positives = 164/243 (67%), Gaps = 6/243 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A I DTVA+G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLFRVAHDKIVDTVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G++LF+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +S+ +L+ LE + + Sbjct: 65 GKVLFIGTKRQAQEAVAAEAGRANQFHVTNRWMGGTLTNFVTIQKSVDRLKKLEAMFADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L +ER+ KL+ L GI++M LP L F++D NRE +A++E R+L IPIV Sbjct: 125 SINRYQKKEILLLEREMKKLEETLGGIKNMDRLPQLAFIIDPNREDIAVKECRKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGAD---TKSA 240 AV DTN +PDL+DY+IPGNDD+ R+I LF + A ++G +++ H + A+ K+A Sbjct: 185 AVTDTNCDPDLIDYIIPGNDDAIRAIKLFVAAFSEACLEGEAMSKDHKEVNAEEAMQKAA 244 Query: 241 GET 243 E+ Sbjct: 245 AES 247 >gi|226313035|ref|YP_002772929.1| 30S ribosomal protein S2 [Brevibacillus brevis NBRC 100599] gi|254764460|sp|C0ZF66|RS2_BREBN RecName: Full=30S ribosomal protein S2 gi|226095983|dbj|BAH44425.1| 30S ribosomal protein S2 [Brevibacillus brevis NBRC 100599] Length = 236 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A + + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVEEAYNFVRELAQDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK QA + V E A+R+ Y +N +WLGG +TN+ T+ + +L +L+ + E Sbjct: 65 GKILFVGTKKQAQESVKEEAERTGHYFINQRWLGGTLTNFTTIKKRTARLAELKRM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G KKE + + ++ D+L++ L GI M LPD +FV+D +E++A+ EAR+L I Sbjct: 122 NDGTFAVLPKKEVIVLRKEMDRLEKFLGGIAHMDKLPDALFVIDPRKERIAVAEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADALLEG 224 >gi|223933542|ref|ZP_03625524.1| ribosomal protein S2 [Streptococcus suis 89/1591] gi|37498573|gb|AAO42672.1| 30S ribosomal protein S2 [Streptococcus suis] gi|223897802|gb|EEF64181.1| ribosomal protein S2 [Streptococcus suis 89/1591] Length = 258 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 152/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + Sbjct: 64 DAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L Sbjct: 121 EEDGTLDVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEG 224 >gi|183221976|ref|YP_001839972.1| 30S ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912044|ref|YP_001963599.1| 30S ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776720|gb|ABZ95021.1| 30S Ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780398|gb|ABZ98696.1| 30S ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 300 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 97/225 (43%), Positives = 158/225 (70%), Gaps = 7/225 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLE+GV FGH+ WNPKM Y++ RN HIIDL +TV ++A + + Sbjct: 4 ISMKSLLEAGVHFGHQTRRWNPKMSPYVYTARNGIHIIDLQKTVQKTKEAYDALKKLTGQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++LFV TK QA + AA+ + Y V+++WLGG++TNW TV +SI +L+ LE++ + Sbjct: 64 GKKVLFVGTKKQARGAIERAAQACSMYYVSNRWLGGLLTNWNTVKKSIARLKRLEQM--E 121 Query: 126 ENQGF-----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EN F TKKE L+++R+ +KL++ L GI+DM +P+++FV+D +E++A++EA++L Sbjct: 122 ENNSFEQEARTKKEALSLKRELEKLRQTLGGIKDMAVVPEILFVIDPKKEEIAVKEAKKL 181 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + + AV+DTN +P+ +DY IPGNDD+ R+I+LF D +A+A ++G Sbjct: 182 GLKVFAVIDTNCDPEPIDYPIPGNDDAIRAISLFLDTMANAVLEG 226 >gi|315638916|ref|ZP_07894088.1| 30S ribosomal protein S2 [Campylobacter upsaliensis JV21] gi|315481134|gb|EFU71766.1| 30S ribosomal protein S2 [Campylobacter upsaliensis JV21] Length = 262 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM++YIF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKYIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +E++A+ EA RL+I Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKSQPDMIFVIDTVKERIAVAEANRLKI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|210622734|ref|ZP_03293326.1| hypothetical protein CLOHIR_01274 [Clostridium hiranonis DSM 13275] gi|210154066|gb|EEA85072.1| hypothetical protein CLOHIR_01274 [Clostridium hiranonis DSM 13275] Length = 239 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 151/221 (68%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV +++A + + + G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMGKYIFTERNGIYIIDLQKTVKKVEEAYKFVKEVAETGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + + E A+R + VN +WLGGM+TN+KT+ I KLR+LE + +E+ Sbjct: 61 PILFVGTKKQAQEAIKEEAERCGMFYVNERWLGGMLTNYKTIKTRINKLRELERM--EED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + + +++KL++ L GI++M LP MFVVD +E +AIQEA RL IP+ Sbjct: 119 GTFDVLPKKEVIKLRAEKEKLEKNLGGIKEMPELPGAMFVVDPRKENIAIQEAHRLGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V +VDTN +P+ +D+ IPGNDD+ R++ L +A+A I+G Sbjct: 179 VGIVDTNCDPEELDFPIPGNDDAIRAVKLITGAMATAVIEG 219 >gi|57505421|ref|ZP_00371349.1| ribosomal protein S2 [Campylobacter upsaliensis RM3195] gi|57016246|gb|EAL53032.1| ribosomal protein S2 [Campylobacter upsaliensis RM3195] Length = 262 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM++YIF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKYIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M PD++FV+DT +E++A+ EA RL+I Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKSQPDMIFVIDTVKERIAVAEANRLKI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|150390451|ref|YP_001320500.1| ribosomal protein S2 [Alkaliphilus metalliredigens QYMF] gi|167011230|sp|A6TRM3|RS2_ALKMQ RecName: Full=30S ribosomal protein S2 gi|149950313|gb|ABR48841.1| ribosomal protein S2 [Alkaliphilus metalliredigens QYMF] Length = 232 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 152/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV M+++ V+ + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKMVEQCYNVMKEIASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E AKR Y VN +WLGGM+TN+KT+ I +L LE++ Sbjct: 64 GSTILFVGTKKQAQEAIEEEAKRCGMYYVNQRWLGGMLTNFKTIKLRIDRLHKLEKM--A 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + + +KL++ L GI+ M +PD +F+VD +E++AI+EA+ L I Sbjct: 122 EDGTFEVLPKKEVIKLRHEMEKLEKFLGGIKGMTQMPDALFIVDPRKERIAIKEAQTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++++VDTN +PD +DY+IPGNDD+ R++ L +A+A I+G Sbjct: 182 PVISIVDTNCDPDEIDYMIPGNDDAIRAVKLLTATMANAIIEG 224 >gi|124267168|ref|YP_001021172.1| SSU ribosomal protein S2P [Methylibium petroleiphilum PM1] gi|124259943|gb|ABM94937.1| SSU ribosomal protein S2P [Methylibium petroleiphilum PM1] Length = 240 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 102/234 (43%), Positives = 155/234 (66%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+GV FGH+ WNPKM +IF RN HII+L +T+P+ +A++ A+ G IL Sbjct: 1 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPLFNEAMKFTRSLAAKRGTIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V TK QA + V + A+R+ V+ +WLGGM+TN+KTV S++KL++++ + Sbjct: 61 MVGTKRQAREVVAQEAQRAGMPYVDQRWLGGMLTNFKTVKGSLKKLKEMQAQQEAGLESM 120 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 +KKE L R+ KL++ + GI+DM LPD MFV+D K+AI EA++L IP++ VVD+ Sbjct: 121 SKKEALLFAREIAKLEKDIGGIQDMNALPDAMFVIDVGYHKIAIAEAKKLGIPVIGVVDS 180 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 N +P+ +DYVIPGNDDS++++AL+ VA AA++G A + + A +S E V Sbjct: 181 NHSPEGIDYVIPGNDDSAKAVALYARAVADAALEGKANAVNEVVAAAQSTDEFV 234 >gi|229918655|ref|YP_002887301.1| 30S ribosomal protein S2 [Exiguobacterium sp. AT1b] gi|259495214|sp|C4L650|RS2_EXISA RecName: Full=30S ribosomal protein S2 gi|229470084|gb|ACQ71856.1| ribosomal protein S2 [Exiguobacterium sp. AT1b] Length = 246 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYNFVRELAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A RS + +N +WLGG +TN+ T+ + I +L+ LE++ +E Sbjct: 65 GNVLFVGTKKQAQDTIKEEAIRSGMFFINERWLGGTLTNFSTIKKRINRLKQLEKM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++++ +L++ L GI+DM G+PD +F+VD +E++AI EA +L IP Sbjct: 123 DGTFEVLPKKEVIILKKEMTRLEKFLGGIKDMPGVPDALFIVDPRKERIAIAEAHKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 183 IVAIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAIIEA 224 >gi|15924246|ref|NP_371780.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu50] gi|15926839|ref|NP_374372.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus N315] gi|21282868|ref|NP_645956.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MW2] gi|49483419|ref|YP_040643.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA252] gi|49486095|ref|YP_043316.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MSSA476] gi|82750857|ref|YP_416598.1| 30S ribosomal protein S2 [Staphylococcus aureus RF122] gi|87160672|ref|YP_493846.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|151221378|ref|YP_001332200.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. Newman] gi|156979577|ref|YP_001441836.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu3] gi|161509422|ref|YP_001575081.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315612|ref|ZP_04838825.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731875|ref|ZP_04866040.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733506|ref|ZP_04867671.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH130] gi|255006043|ref|ZP_05144644.2| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425310|ref|ZP_05601735.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257427971|ref|ZP_05604369.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257430604|ref|ZP_05606986.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 68-397] gi|257433364|ref|ZP_05609722.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus E1410] gi|257436206|ref|ZP_05612253.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus M876] gi|258415912|ref|ZP_05682182.1| 30S ribosomal protein S2 [Staphylococcus aureus A9763] gi|258423903|ref|ZP_05686788.1| SSU ribosomal protein S2 [Staphylococcus aureus A9635] gi|258434830|ref|ZP_05688904.1| 30S ribosomal protein S2 [Staphylococcus aureus A9299] gi|258444594|ref|ZP_05692923.1| 30S ribosomal protein S2 [Staphylococcus aureus A8115] gi|258447573|ref|ZP_05695717.1| 30S ribosomal protein S2 [Staphylococcus aureus A6300] gi|258449415|ref|ZP_05697518.1| 30S ribosomal protein S2 [Staphylococcus aureus A6224] gi|258452555|ref|ZP_05700561.1| 30S ribosomal protein S2 [Staphylococcus aureus A5948] gi|258454794|ref|ZP_05702758.1| 30S ribosomal protein S2 [Staphylococcus aureus A5937] gi|262051318|ref|ZP_06023541.1| 30S ribosomal protein S2 [Staphylococcus aureus 930918-3] gi|269202872|ref|YP_003282141.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ED98] gi|282892744|ref|ZP_06300979.1| 30S ribosomal protein S2 [Staphylococcus aureus A8117] gi|282903811|ref|ZP_06311699.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus C160] gi|282905574|ref|ZP_06313429.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282908549|ref|ZP_06316379.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910828|ref|ZP_06318631.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282914033|ref|ZP_06321820.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M899] gi|282916516|ref|ZP_06324274.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus D139] gi|282918955|ref|ZP_06326690.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C427] gi|282920500|ref|ZP_06328221.1| 30S ribosomal protein S2 [Staphylococcus aureus A9765] gi|282924078|ref|ZP_06331754.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C101] gi|282927598|ref|ZP_06335214.1| 30S ribosomal protein S2 [Staphylococcus aureus A10102] gi|283770320|ref|ZP_06343212.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus H19] gi|283957999|ref|ZP_06375450.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus A017934/97] gi|284024249|ref|ZP_06378647.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 132] gi|293501065|ref|ZP_06666916.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 58-424] gi|293510027|ref|ZP_06668735.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus M809] gi|293526613|ref|ZP_06671298.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M1015] gi|294848251|ref|ZP_06788998.1| 30S ribosomal protein S2 [Staphylococcus aureus A9754] gi|295427743|ref|ZP_06820375.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296274814|ref|ZP_06857321.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MR1] gi|297208098|ref|ZP_06924529.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297591299|ref|ZP_06949937.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MN8] gi|304381180|ref|ZP_07363833.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039455|sp|P66544|RS2_STAAN RecName: Full=30S ribosomal protein S2 gi|54039456|sp|P66545|RS2_STAAW RecName: Full=30S ribosomal protein S2 gi|54041956|sp|P66543|RS2_STAAM RecName: Full=30S ribosomal protein S2 gi|56749388|sp|Q6G9V7|RS2_STAAS RecName: Full=30S ribosomal protein S2 gi|56749417|sp|Q6GHH9|RS2_STAAR RecName: Full=30S ribosomal protein S2 gi|123486188|sp|Q2FHI2|RS2_STAA3 RecName: Full=30S ribosomal protein S2 gi|123768552|sp|Q2YXL2|RS2_STAAB RecName: Full=30S ribosomal protein S2 gi|166226759|sp|A7X1N3|RS2_STAA1 RecName: Full=30S ribosomal protein S2 gi|172048866|sp|A6QGF6|RS2_STAAE RecName: Full=30S ribosomal protein S2 gi|189044991|sp|A8Z3T6|RS2_STAAT RecName: Full=30S ribosomal protein S2 gi|209573687|sp|Q2FZ25|RS2_STAA8 RecName: Full=30S ribosomal protein S2 gi|13701056|dbj|BAB42351.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus N315] gi|14247026|dbj|BAB57418.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu50] gi|21204307|dbj|BAB95004.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MW2] gi|49241548|emb|CAG40234.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA252] gi|49244538|emb|CAG42967.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MSSA476] gi|82656388|emb|CAI80807.1| 30S ribosomal protein S2 [Staphylococcus aureus RF122] gi|87126646|gb|ABD21160.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|150374178|dbj|BAF67438.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. Newman] gi|156721712|dbj|BAF78129.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu3] gi|160368231|gb|ABX29202.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724285|gb|EES93014.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728560|gb|EES97289.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH130] gi|257271767|gb|EEV03905.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257274812|gb|EEV06299.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257278732|gb|EEV09351.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 68-397] gi|257281457|gb|EEV11594.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus E1410] gi|257284488|gb|EEV14608.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus M876] gi|257839248|gb|EEV63722.1| 30S ribosomal protein S2 [Staphylococcus aureus A9763] gi|257845932|gb|EEV69961.1| SSU ribosomal protein S2 [Staphylococcus aureus A9635] gi|257849191|gb|EEV73173.1| 30S ribosomal protein S2 [Staphylococcus aureus A9299] gi|257850087|gb|EEV74040.1| 30S ribosomal protein S2 [Staphylococcus aureus A8115] gi|257853764|gb|EEV76723.1| 30S ribosomal protein S2 [Staphylococcus aureus A6300] gi|257857403|gb|EEV80301.1| 30S ribosomal protein S2 [Staphylococcus aureus A6224] gi|257859773|gb|EEV82615.1| 30S ribosomal protein S2 [Staphylococcus aureus A5948] gi|257863177|gb|EEV85941.1| 30S ribosomal protein S2 [Staphylococcus aureus A5937] gi|259160693|gb|EEW45714.1| 30S ribosomal protein S2 [Staphylococcus aureus 930918-3] gi|262075162|gb|ACY11135.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ED98] gi|269940747|emb|CBI49129.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TW20] gi|282314050|gb|EFB44442.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C101] gi|282316765|gb|EFB47139.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C427] gi|282319003|gb|EFB49355.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus D139] gi|282322101|gb|EFB52425.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M899] gi|282325433|gb|EFB55742.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327611|gb|EFB57894.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330866|gb|EFB60380.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282590601|gb|EFB95678.1| 30S ribosomal protein S2 [Staphylococcus aureus A10102] gi|282594162|gb|EFB99149.1| 30S ribosomal protein S2 [Staphylococcus aureus A9765] gi|282595429|gb|EFC00393.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus C160] gi|282764741|gb|EFC04866.1| 30S ribosomal protein S2 [Staphylococcus aureus A8117] gi|283460467|gb|EFC07557.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus H19] gi|283470471|emb|CAQ49682.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus ST398] gi|283790148|gb|EFC28965.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus A017934/97] gi|285816938|gb|ADC37425.1| 30S ribosomal protein S2 [Staphylococcus aureus 04-02981] gi|290920685|gb|EFD97748.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M1015] gi|291096070|gb|EFE26331.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 58-424] gi|291466971|gb|EFF09489.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus M809] gi|294825051|gb|EFG41473.1| 30S ribosomal protein S2 [Staphylococcus aureus A9754] gi|295128101|gb|EFG57735.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887341|gb|EFH26243.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297576185|gb|EFH94901.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MN8] gi|298694548|gb|ADI97770.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ED133] gi|302332862|gb|ADL23055.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus JKD6159] gi|302751079|gb|ADL65256.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340163|gb|EFM06104.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438365|gb|ADQ77436.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH60] gi|312829650|emb|CBX34492.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315194143|gb|EFU24536.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus CGS00] gi|315198497|gb|EFU28826.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus CGS01] gi|320140927|gb|EFW32774.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA131] gi|320144357|gb|EFW36123.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA177] gi|323441034|gb|EGA98741.1| 30S ribosomal protein S2 [Staphylococcus aureus O11] gi|323443903|gb|EGB01514.1| 30S ribosomal protein S2 [Staphylococcus aureus O46] gi|329313926|gb|AEB88339.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus T0131] gi|329727808|gb|EGG64259.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus 21189] Length = 255 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEG 224 >gi|313140318|ref|ZP_07802511.1| 30S ribosomal protein S2 [Bifidobacterium bifidum NCIMB 41171] gi|313132828|gb|EFR50445.1| 30S ribosomal protein S2 [Bifidobacterium bifidum NCIMB 41171] Length = 300 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 114/244 (46%), Positives = 163/244 (66%), Gaps = 5/244 (2%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ Q T+ ++L++GV FGH+ WNPKM++YI ERN HII+L +++ ++ KA I Sbjct: 26 AMAQITMSEMLKAGVHFGHQTRRWNPKMKQYILMERNGIHIINLFKSLELIDKAYDFIKA 85 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 86 TVAHNGTVLFVGTKKQAQEAVQTQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEE 145 Query: 122 L--LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L +ER++DKL++ L GIR+M P MFVVD N+E LA++EA + Sbjct: 146 MDFSDVHGSGLTKKELLLLEREKDKLEKQLGGIRNMVRTPSAMFVVDINKESLAVEEAHK 205 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN++P+ VDY IP NDD+ R I L L+A A DG+ + G K+ Sbjct: 206 LGIPVVALVDTNTDPESVDYPIPANDDAIRGIELLTSLMADAVADGLLERS---GRAAKA 262 Query: 240 AGET 243 GET Sbjct: 263 EGET 266 >gi|170287970|ref|YP_001738208.1| ribosomal protein S2 [Thermotoga sp. RQ2] gi|170175473|gb|ACB08525.1| ribosomal protein S2 [Thermotoga sp. RQ2] Length = 262 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + + + G Sbjct: 5 TMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREKASEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + A+R + VN++WLGG++TN+KT+ I+KL +LEE+ E Sbjct: 65 ATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIEKLIELEEM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE+ I R +KL++ L G+++M +PD++++VD +EK+A+ EA +L I Sbjct: 122 QSGKLDELPKKEQSRIRRILEKLRKNLGGLKEMRKIPDIIYIVDPRKEKIAVAEANKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A+A ++G Sbjct: 182 PIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIANAYLEG 224 >gi|332298053|ref|YP_004439975.1| ribosomal protein S2 [Treponema brennaborense DSM 12168] gi|332181156|gb|AEE16844.1| ribosomal protein S2 [Treponema brennaborense DSM 12168] Length = 288 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 109/264 (41%), Positives = 178/264 (67%), Gaps = 15/264 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + + G Sbjct: 5 TMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIVSIKEAYEAVRKVTVAG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + + A+R Y VN++WLGGM+TN+ T+ +S+ +L+ LE++ ++ Sbjct: 65 KSVLFVGTKKQAQQAIAKEAERCGMYYVNNRWLGGMLTNFSTIKKSLLRLKKLEKMEIDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE +I++++ KL++ L GI++M LP ++F++DT++E++A+ EARR+ IPIV Sbjct: 125 TFENLTKKEIASIQKEKSKLEKNLGGIKEMKDLPGIIFIIDTHKEQIAVAEARRMGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 AVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A ID + ET + Sbjct: 185 AVVDTNCNPEGIDYPIPGNDDAIRAISLFTQVIANAVID--------------ADNETGL 230 Query: 246 HSKEGMQLEEDSQSSESSVLDGQE 269 E +Q +ED +++++V +E Sbjct: 231 KIIENLQDDEDEVTTDAAVKSEEE 254 >gi|146297357|ref|YP_001181128.1| ribosomal protein S2 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166225252|sp|A4XM02|RS2_CALS8 RecName: Full=30S ribosomal protein S2 gi|145410933|gb|ABP67937.1| SSU ribosomal protein S2P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 258 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA + + E A+R Y +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VQEGKIILFVGTKKQAQETIKEEAERCGMYYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+ +N+ RK +++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|221124408|ref|XP_002163947.1| PREDICTED: similar to ribosomal protein S2 [Hydra magnipapillata] gi|260220935|emb|CBA29001.1| 30S ribosomal protein S2 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 250 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 151/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + + A+ Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFVRQLSAKR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQAREIVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKVQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+AI EAR+L IP++ Sbjct: 124 LDSMSKKEQLMFARELEKLEKDIGGIQDMNTLPDAIFVIDVGYHKIAIAEARKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A ++G A Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAILEGRA 224 >gi|312621975|ref|YP_004023588.1| 30S ribosomal protein S2 [Caldicellulosiruptor kronotskyensis 2002] gi|312202442|gb|ADQ45769.1| ribosomal protein S2 [Caldicellulosiruptor kronotskyensis 2002] Length = 258 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+ +N+ RK +++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|71907372|ref|YP_284959.1| 30S ribosomal protein S2 [Dechloromonas aromatica RCB] gi|123760541|sp|Q47F92|RS2_DECAR RecName: Full=30S ribosomal protein S2 gi|71846993|gb|AAZ46489.1| SSU ribosomal protein S2P [Dechloromonas aromatica RCB] Length = 248 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 148/220 (67%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ W+PKM YIF RN HI++L +T+ +A+ + + Sbjct: 4 TMREMLEAGVHFGHQTRFWSPKMAPYIFGARNKIHIVNLEKTLAKYNEAMAFVKKLASSR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK QA + + E A R+ V+ +WLGGM+TN+KTV SI++L+D+E + Sbjct: 64 GTILFVGTKRQAREIIGEEALRAGAPFVDQRWLGGMLTNFKTVKTSIKRLKDMEVAVEAG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + KKE L R+ +KL++++ GI++M GLPD +FV+D K+AI EA +L IP++ Sbjct: 124 ELEKMPKKEALTFRRELEKLQKSIGGIKEMAGLPDAIFVIDVGYHKIAITEAEKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +PD V YVIPGNDDSSR+I L+ VA A ++G Sbjct: 184 GVVDTNHSPDGVAYVIPGNDDSSRAIQLYARGVADAILEG 223 >gi|226324761|ref|ZP_03800279.1| hypothetical protein COPCOM_02547 [Coprococcus comes ATCC 27758] gi|225207209|gb|EEG89563.1| hypothetical protein COPCOM_02547 [Coprococcus comes ATCC 27758] Length = 252 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q +SD A Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYQAVSDIAAE 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 69 GGKILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKEIEAM--S 126 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I+++ +KL++ L GI++M +PD +FVVD +E++ +QEA L I Sbjct: 127 EDGTFDVLPKKEVIEIKKEWEKLEKNLGGIKEMKRIPDAIFVVDPKKERICVQEAHTLGI 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 187 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 228 >gi|126653714|ref|ZP_01725632.1| 30S ribosomal protein S2 [Bacillus sp. B14905] gi|126589678|gb|EAZ83814.1| 30S ribosomal protein S2 [Bacillus sp. B14905] Length = 239 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQVGQD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + + A+RS Y +N +WLGG +TN+ T+ + + +++ +E++ Sbjct: 64 GGKVLFVGTKKQAQEAIKDEAERSGNYYINQRWLGGTLTNFGTIQKRVARMKQIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EAR+L Sbjct: 121 EEEGTFEVLPKKEVIQLKKEHERLIKFLGGIRDMHDLPDVMFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP+V +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPLVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALIE 223 >gi|312793069|ref|YP_004025992.1| 30S ribosomal protein S2 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876741|ref|ZP_07736720.1| ribosomal protein S2 [Caldicellulosiruptor lactoaceticus 6A] gi|311796472|gb|EFR12822.1| ribosomal protein S2 [Caldicellulosiruptor lactoaceticus 6A] gi|312180209|gb|ADQ40379.1| ribosomal protein S2 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 258 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+ +N+ RK +++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|332530835|ref|ZP_08406761.1| 30S ribosomal protein S2 [Hylemonella gracilis ATCC 19624] gi|332039747|gb|EGI76147.1| 30S ribosomal protein S2 [Hylemonella gracilis ATCC 19624] Length = 249 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 151/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF R+ HII+L +++PM Q+A + AR Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRSKIHIINLEKSLPMFQEAAKFAKQLAARR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK A + V A+R+ V+ +WLGGM+TN+KTV S+++L+D++ Sbjct: 64 GTILFVGTKRTAREIVAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSLKRLKDMKVQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L +R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LDAMSKKEQLMFQRELEKLEKDIGGIQDMATLPDAIFVIDVGYHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A ++G A Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAILEGRA 224 >gi|317056326|ref|YP_004104793.1| 30S ribosomal protein S2 [Ruminococcus albus 7] gi|315448595|gb|ADU22159.1| ribosomal protein S2 [Ruminococcus albus 7] Length = 245 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A I + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLEEAYMFIREISANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D + E A R+ + VN++WLGGMMTN+KT+ Q I++L L + +E Sbjct: 65 QEVLFVGTKKQAGDSIKEEALRANAHYVNARWLGGMMTNFKTIEQRIKRLEQLHAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE ++ + +KL++ + GI++M LP +FVVD +EK+A+ EA++L IP Sbjct: 123 DGTFELLPKKEVTKLKLEIEKLEKFMGGIKNMKKLPGALFVVDPRKEKIAVAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G Sbjct: 183 VVAIVDTNCDPDDVDYVIPGNDDAIRAVKLIAGCMANAIIEG 224 >gi|325923979|ref|ZP_08185568.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865] gi|325545562|gb|EGD16827.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865] Length = 279 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|253573553|ref|ZP_04850896.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str. D14] gi|251847081|gb|EES75086.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str. D14] Length = 232 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKRIAEEN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D V E A+R+ Q+ +N +WLGG +TN++T+ + I++L+ LE +E Sbjct: 65 GTILFVGTKKQAQDSVKEEAERAGQFYINQRWLGGTLTNFQTIQKRIERLKQLETW--EE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F+ KKE + + +++++L++ L GI++M LP +FV+D +E++A+ EAR+L IP Sbjct: 123 DGTFSVLPKKEVIILRKEKERLEKFLGGIKNMKSLPSALFVIDPRKERIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IV +VDTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEA 224 >gi|312143679|ref|YP_003995125.1| ribosomal protein S2 [Halanaerobium sp. 'sapolanicus'] gi|311904330|gb|ADQ14771.1| ribosomal protein S2 [Halanaerobium sp. 'sapolanicus'] Length = 252 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 152/222 (68%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLESGV FGH+ WNPKME YIF ERN +IIDL QTV ++ KA + + A G Sbjct: 6 MKQLLESGVHFGHQTKRWNPKMEPYIFTERNGIYIIDLQQTVKLIDKAYNFVKEEAAEGK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA + V + A+R VN +WLGGM+TN+ T+ + I + L+EL E Sbjct: 66 KVLFVGTKRQAQETVKKEAERCGMPYVNQRWLGGMLTNYHTIKKRIDR---LDELEEMEE 122 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +G KKE + + ++ DKL+R L GIR+M GLPD++F+ D +E +A++EA +L IP Sbjct: 123 EGIFEVLPKKEVIELNKEHDKLERFLGGIRNMNGLPDVIFITDAKKEDIAVKEAIKLDIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IV+++DTN +PDL+DYVIPGNDD+ R++ L +++ A + G Sbjct: 183 IVSILDTNCDPDLIDYVIPGNDDAIRAVKLITSVISDAVLAG 224 >gi|86152737|ref|ZP_01070942.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843622|gb|EAQ60832.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 263 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 148/225 (65%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE L + RK++KL L GIR M D++FV+DT +EK+A+QEA RLRI Sbjct: 120 EDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQHDMIFVIDTVKEKIAVQEANRLRI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P+VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A Sbjct: 180 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKA 224 >gi|57651825|ref|YP_186131.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus COL] gi|300912179|ref|ZP_07129622.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH70] gi|61215355|sp|Q5HGH6|RS2_STAAC RecName: Full=30S ribosomal protein S2 gi|57286011|gb|AAW38105.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus COL] gi|300886425|gb|EFK81627.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH70] Length = 258 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEG 224 >gi|217077270|ref|YP_002334988.1| 30S ribosomal protein S2 [Thermosipho africanus TCF52B] gi|226697648|sp|B7IHT3|RS2_THEAB RecName: Full=30S ribosomal protein S2 gi|217037125|gb|ACJ75647.1| ribosomal protein S2 [Thermosipho africanus TCF52B] Length = 259 Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 107/257 (41%), Positives = 163/257 (63%), Gaps = 3/257 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGHR WNPKM+ YIF R +IIDL +T +L +A + D A Sbjct: 4 LTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLDEAYNFVRDKAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG ILFV TK QA + + A+R + VN +WLGG++TN++T+ + I KL +LEE+ N Sbjct: 64 GGTILFVGTKKQAQQVIKQEAERCGAFYVNHRWLGGLLTNFETIRKRIDKLIELEEMEAN 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E KKE+ + R +KL++ L G+++M LPD++++VD +E+ A+ EA L+IP Sbjct: 124 GEFDHLPKKEQSRLRRILEKLRKNLGGLKNMTSLPDVIYIVDPRKERNAVYEANLLKIPT 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN +PD +DY+IPGNDD+ R+I L +A A ++G R+ G++ Sbjct: 184 VAIVDTNCDPDEIDYIIPGNDDAIRAIQLITSKIADAYLEG--REGVSFGSEEAEENNQK 241 Query: 245 VHSKEGMQLEEDSQSSE 261 ++E ++E+ +S E Sbjct: 242 EDNEEIFEIEDVDESEE 258 >gi|329733661|gb|EGG69989.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus 21193] Length = 262 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEG 224 >gi|328957398|ref|YP_004374784.1| 30S ribosomal protein S2 [Carnobacterium sp. 17-4] gi|328673722|gb|AEB29768.1| 30S ribosomal protein S2 [Carnobacterium sp. 17-4] Length = 262 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLADTAYNYMKEVSEN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + + A RS QY VN +WLGG +TNW T+ + I++L+ + ++ + Sbjct: 64 GGIALFVGTKKQAQEAIKDEATRSGQYFVNHRWLGGTLTNWDTIQKRIKRLKAINKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++RD+L++ L GI+DM +PD+MFVVD +E++AIQEA +L I Sbjct: 122 EDGTFDLLPKKEVGILIKQRDRLEKFLGGIQDMPRIPDVMFVVDPRKERIAIQEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN +PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNCDPDEIDVIIPSNDDAIRAVKLITSKMADAMIEG 224 >gi|42519372|ref|NP_965302.1| 30S ribosomal protein S2 [Lactobacillus johnsonii NCC 533] gi|227890237|ref|ZP_04008042.1| 30S ribosomal protein S2 [Lactobacillus johnsonii ATCC 33200] gi|61215652|sp|Q74IR7|RS2_LACJO RecName: Full=30S ribosomal protein S2 gi|41583660|gb|AAS09268.1| 30S ribosomal protein S2 [Lactobacillus johnsonii NCC 533] gi|227849239|gb|EEJ59325.1| 30S ribosomal protein S2 [Lactobacillus johnsonii ATCC 33200] gi|329667109|gb|AEB93057.1| 30S ribosomal protein S2 [Lactobacillus johnsonii DPC 6026] Length = 261 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + G Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L++L+++ E Sbjct: 65 GVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKELKQM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L IP Sbjct: 123 DGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEG 224 >gi|312135569|ref|YP_004002907.1| 30S ribosomal protein S2 [Caldicellulosiruptor owensensis OL] gi|311775620|gb|ADQ05107.1| ribosomal protein S2 [Caldicellulosiruptor owensensis OL] Length = 258 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+ +N+ RK +++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|222529800|ref|YP_002573682.1| 30S ribosomal protein S2 [Caldicellulosiruptor bescii DSM 6725] gi|254764451|sp|B9MKQ1|RS2_ANATD RecName: Full=30S ribosomal protein S2 gi|222456647|gb|ACM60909.1| ribosomal protein S2 [Caldicellulosiruptor bescii DSM 6725] Length = 257 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+ +N+ RK +++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|268319251|ref|YP_003292907.1| ribosomal protein S2 [Lactobacillus johnsonii FI9785] gi|262397626|emb|CAX66640.1| ribosomal protein S2 [Lactobacillus johnsonii FI9785] Length = 261 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + G Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L++L+++ E Sbjct: 65 GVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKELKQM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L IP Sbjct: 123 DGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEG 224 >gi|148267746|ref|YP_001246689.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus JH9] gi|150393804|ref|YP_001316479.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus JH1] gi|257795688|ref|ZP_05644667.1| 30S ribosomal protein S2 [Staphylococcus aureus A9781] gi|258421674|ref|ZP_05684598.1| SSU ribosomal protein S2 [Staphylococcus aureus A9719] gi|295406192|ref|ZP_06815999.1| 30S ribosomal protein S2 [Staphylococcus aureus A8819] gi|297244420|ref|ZP_06928303.1| 30S ribosomal protein S2 [Staphylococcus aureus A8796] gi|189044992|sp|A5ISE0|RS2_STAA9 RecName: Full=30S ribosomal protein S2 gi|189044993|sp|A6U174|RS2_STAA2 RecName: Full=30S ribosomal protein S2 gi|147740815|gb|ABQ49113.1| SSU ribosomal protein S2P [Staphylococcus aureus subsp. aureus JH9] gi|149946256|gb|ABR52192.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus JH1] gi|257789660|gb|EEV28000.1| 30S ribosomal protein S2 [Staphylococcus aureus A9781] gi|257842360|gb|EEV66785.1| SSU ribosomal protein S2 [Staphylococcus aureus A9719] gi|294968780|gb|EFG44802.1| 30S ribosomal protein S2 [Staphylococcus aureus A8819] gi|297178450|gb|EFH37696.1| 30S ribosomal protein S2 [Staphylococcus aureus A8796] gi|315131049|gb|EFT87033.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus CGS03] gi|329727691|gb|EGG64147.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus 21172] Length = 255 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVRKVDEAYNFLKQVSED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 64 GGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEG 224 >gi|302872262|ref|YP_003840898.1| ribosomal protein S2 [Caldicellulosiruptor obsidiansis OB47] gi|302575121|gb|ADL42912.1| ribosomal protein S2 [Caldicellulosiruptor obsidiansis OB47] Length = 258 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+ +N+ RK +++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEG 224 >gi|325679340|ref|ZP_08158925.1| ribosomal protein S2 [Ruminococcus albus 8] gi|324108937|gb|EGC03168.1| ribosomal protein S2 [Ruminococcus albus 8] Length = 242 Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A I + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLEEAYMFIRNISAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D + E A R+ + VN++WLGGMMTN+KT+ Q I++L L + +E Sbjct: 65 QEVLFVGTKKQAGDSIKEEALRANAHYVNARWLGGMMTNFKTIEQRIKRLEQLHAM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE ++ + +KL++ + GI++M LP +FVVD +EK+A+ EA++L IP Sbjct: 123 DGTFDLLPKKEVTKLKLEIEKLEKFMGGIKNMKKLPGALFVVDPRKEKIAVAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G Sbjct: 183 VVAIVDTNCDPDDVDYVIPGNDDAIRAVKLIAGCMANAIIEG 224 >gi|289662909|ref|ZP_06484490.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670220|ref|ZP_06491295.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 267 Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|45656741|ref|YP_000827.1| 30S ribosomal protein S2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|61215623|sp|Q72U14|RS2_LEPIC RecName: Full=30S ribosomal protein S2 gi|61215774|sp|Q8F140|RS2_LEPIN RecName: Full=30S ribosomal protein S2 gi|45599977|gb|AAS69464.1| 30S ribosomal protein S2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 294 Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 3/223 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + + Sbjct: 4 ISMKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKLTSE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE--ELL 123 G ++LFV TK QA + A RS + +N++W GG++TNW TV +SI +L+ LE E Sbjct: 64 GKKVLFVGTKKQARGAIEREAIRSNMFFINNRWPGGLLTNWNTVKRSIARLKKLEGMEAD 123 Query: 124 NK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+L + Sbjct: 124 NSFEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARKLGL 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G Sbjct: 184 KIFAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEG 226 >gi|146321831|ref|YP_001201542.1| 30S ribosomal protein S2 [Streptococcus suis 98HAH33] gi|145692637|gb|ABP93142.1| 30S ribosomal protein S2 [Streptococcus suis 98HAH33] gi|292559250|gb|ADE32251.1| Ribosomal protein S2 [Streptococcus suis GZ1] Length = 300 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D A Sbjct: 46 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDAAAN 105 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + + Sbjct: 106 DAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM--E 163 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L I Sbjct: 164 EDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLGI 223 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 224 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEG 266 >gi|296136579|ref|YP_003643821.1| ribosomal protein S2 [Thiomonas intermedia K12] gi|294340707|emb|CAZ89099.1| 30S ribosomal protein S2 [Thiomonas sp. 3As] gi|295796701|gb|ADG31491.1| ribosomal protein S2 [Thiomonas intermedia K12] Length = 252 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 100/220 (45%), Positives = 149/220 (67%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++RQ+LE+GV FGH+ WNPKM YI+ RN HI++L +T+PM +A + AR Sbjct: 4 SMRQMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIVNLEKTLPMYLEAAKFARQLAARR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G ILFV TK QA + V E A+R V+ +WLGGM+TN+KTV SI+KL+D++ + Sbjct: 64 GTILFVGTKRQAGEIVREQAERCGMPYVDQRWLGGMLTNFKTVKTSIKKLKDMQAQAAEG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE L +R+ DKL++++ GI+DM LPD +FV+D K+AI EA+ L IP++ Sbjct: 124 VLEQMSKKEALTFQREMDKLEKSIGGIQDMAALPDAIFVIDVGYHKIAIAEAKTLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN +P V ++IPGNDDS++++ L+ +A A ++G Sbjct: 184 GVVDTNHSPLGVTHIIPGNDDSAKAVMLYAQGMADAILEG 223 >gi|326316573|ref|YP_004234245.1| 30S ribosomal protein S2 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373409|gb|ADX45678.1| ribosomal protein S2 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 250 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 97/221 (43%), Positives = 151/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + + A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQAREILASEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM LPD +F++D K+A+ EA++L IP++ Sbjct: 124 LESMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P+ +DYVIPGNDDS++++AL+ +A A I+G A Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224 >gi|254303392|ref|ZP_04970750.1| ribosomal protein S2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323584|gb|EDK88834.1| ribosomal protein S2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 247 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 152/221 (68%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + G Sbjct: 5 SMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ + I+++++LE++ + Sbjct: 65 GKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKKRIERMKELEKMDAEG 124 Query: 127 --NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L IP+ Sbjct: 125 ILDSDYTKKEAAEFRKELSKLSKNLSGIRDMERVPDAIYVVDVKMEELPVKEAHLLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 185 FAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEG 225 >gi|289423556|ref|ZP_06425357.1| ribosomal protein S2 [Peptostreptococcus anaerobius 653-L] gi|289156058|gb|EFD04722.1| ribosomal protein S2 [Peptostreptococcus anaerobius 653-L] Length = 248 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 107/228 (46%), Positives = 150/228 (65%), Gaps = 9/228 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYKYMQEIAET 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + + A+R Y VN +WLGGM+TN KT+ IQKLR+LE + Sbjct: 64 GKPILFVGTKKQAQEAIKDEAQRCGMYYVNERWLGGMLTNHKTIKTRIQKLRELEAM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 EN G KKE + + +++KL++ L GI+DM LP MFV+D +E +AIQEA RL Sbjct: 121 ENDGTFDVLPKKEVIKLRAEKEKLEKFLGGIKDMPELPAAMFVIDPRKENIAIQEAHRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP++ VDTN +P+ +DY IP NDD+ R+I L +A+A I+ ARQ Sbjct: 181 IPVIGTVDTNCDPEEIDYPIPANDDAIRAIKLITGAMANAVIE--ARQ 226 >gi|161507691|ref|YP_001577647.1| 30S ribosomal protein S2 [Lactobacillus helveticus DPC 4571] gi|260101375|ref|ZP_05751612.1| 30S ribosomal protein S2 [Lactobacillus helveticus DSM 20075] gi|209573657|sp|A8YVR9|RS2_LACH4 RecName: Full=30S ribosomal protein S2 gi|160348680|gb|ABX27354.1| ribosomal protein S2 [Lactobacillus helveticus DPC 4571] gi|260084827|gb|EEW68947.1| 30S ribosomal protein S2 [Lactobacillus helveticus DSM 20075] gi|328465735|gb|EGF36939.1| 30S ribosomal protein S2 [Lactobacillus helveticus MTCC 5463] Length = 257 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + G Sbjct: 6 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKTVAEDG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 66 GVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM--SQ 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP Sbjct: 124 DGTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Sbjct: 184 VVAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIVEG 225 >gi|163816848|ref|ZP_02208211.1| hypothetical protein COPEUT_03038 [Coprococcus eutactus ATCC 27759] gi|158448105|gb|EDP25100.1| hypothetical protein COPEUT_03038 [Coprococcus eutactus ATCC 27759] Length = 249 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 104/223 (46%), Positives = 148/223 (66%), Gaps = 7/223 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YI+ ERN +IIDL ++V M+ A I D VA Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMKPYIYTERNGIYIIDLQKSVGMVDDAYNAIGDCVAN 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I L+ EE+ Sbjct: 69 GGTILFVGTKKQAQDSIKSEAERCGMYYVNERWLGGMLTNFKTIQTRIATLKKYEEM--- 125 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + I+++ +KL++ L GI+DM +PD++FVVD +E++ IQEA+ L Sbjct: 126 EQDGTFDVLPKKEVIQIKKEMEKLEKNLGGIKDMKRIPDMIFVVDPKKERICIQEAQSLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I +V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 186 IKLVGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 228 >gi|327441024|dbj|BAK17389.1| ribosomal protein S2 [Solibacillus silvestris StLB046] Length = 240 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQVGQD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + E A+RS Y +N +WLGG +TN+ T+ + +++++D+E++ + Sbjct: 64 GGKVLFVGTKKQAQEAIKEEAERSGNYYINQRWLGGTLTNFGTIQKRVKRMKDIEKM--E 121 Query: 126 ENQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L + L GIRDM +PD+MFVVD +E++A+ EA +L I Sbjct: 122 EDGTFAVLPKKEVIQLKKEHERLVKFLGGIRDMKAIPDVMFVVDPRKERIAVAEAIKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+V +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 182 PLVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALLEA 224 >gi|225018400|ref|ZP_03707592.1| hypothetical protein CLOSTMETH_02347 [Clostridium methylpentosum DSM 5476] gi|224948818|gb|EEG30027.1| hypothetical protein CLOSTMETH_02347 [Clostridium methylpentosum DSM 5476] Length = 242 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 154/221 (69%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV L++A +++ A G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKLEEAYNFVNELAANGE 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA++ + E A R + VN++WLGGMMTN+KT+ I +L+ L ++ +E+ Sbjct: 61 EILFVGTKKQAAESIKEEATRCGMHFVNARWLGGMMTNFKTIRTRIDRLKQLRKM--EED 118 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + + + +KL++ L GI++M LP +FVVD +EK+A+ EA++L IP+ Sbjct: 119 GTFALLPKKEVIKLNLEIEKLEKFLGGIKNMKKLPGALFVVDPRKEKIAVAEAKKLGIPV 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN +PD +DYVIPGNDD+ R++ L ++A+A ++ Sbjct: 179 VAIVDTNCDPDEIDYVIPGNDDAIRAVKLISSVMANAVMEA 219 >gi|260424723|ref|ZP_05733065.2| ribosomal protein S2 [Dialister invisus DSM 15470] gi|260402954|gb|EEW96501.1| ribosomal protein S2 [Dialister invisus DSM 15470] Length = 246 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 98/219 (44%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A I + A G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVEEAYAFIREVAATGA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + V E A+R + VN +WLGGM+TN++T+ + +L++LE++ + Sbjct: 61 PILFVGTKKQAQNSVREEAQRCNMFYVNERWLGGMLTNFRTIQARVARLKELEKMFEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + + KKE + ++R+ +KL++ L GI+DM +P +FV+D+ +E++A+ EA +L IP+VA Sbjct: 121 TEQYPKKEVILMQRELEKLQKNLGGIKDMKKIPGAIFVIDSKKEEIAVAEAHKLHIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VDTN +PD+VD+ IP NDD+ R++ L +A A ++G Sbjct: 181 TVDTNCDPDVVDFPIPANDDAIRAVRLLASKMADAILEG 219 >gi|78047035|ref|YP_363210.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123757529|sp|Q3BVK3|RS2_XANC5 RecName: Full=30S ribosomal protein S2 gi|78035465|emb|CAJ23110.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 265 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/229 (44%), Positives = 148/229 (64%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA+ Sbjct: 120 --AETDGTFDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +L IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 KLGIPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|120610503|ref|YP_970181.1| 30S ribosomal protein S2 [Acidovorax citrulli AAC00-1] gi|166225230|sp|A1TN69|RS2_ACIAC RecName: Full=30S ribosomal protein S2 gi|120588967|gb|ABM32407.1| SSU ribosomal protein S2P [Acidovorax citrulli AAC00-1] Length = 250 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 97/221 (43%), Positives = 151/221 (68%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + + A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQARELLAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE+L R+ +KL++ + GI+DM LPD +F++D K+A+ EA++L IP++ Sbjct: 124 LESMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P+ +DYVIPGNDDS++++AL+ +A A I+G A Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224 >gi|66769169|ref|YP_243931.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. 8004] gi|188992317|ref|YP_001904327.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. B100] gi|81304871|sp|Q4USR2|RS2_XANC8 RecName: Full=30S ribosomal protein S2 gi|229559898|sp|B0RW65|RS2_XANCB RecName: Full=30S ribosomal protein S2 gi|66574501|gb|AAY49911.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. 8004] gi|167734077|emb|CAP52283.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris] Length = 275 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|294828286|ref|NP_713478.2| 30S ribosomal protein S2 [Leptospira interrogans serovar Lai str. 56601] gi|293386137|gb|AAN50496.2| 30S ribosomal protein S2 [Leptospira interrogans serovar Lai str. 56601] Length = 289 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 152/221 (68%), Gaps = 3/221 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + + G Sbjct: 1 MKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKLTSEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE--ELLNK 125 ++LFV TK QA + A RS + +N++W GG++TNW TV +SI +L+ LE E N Sbjct: 61 KVLFVGTKKQARGAIEREAIRSNMFFINNRWPGGLLTNWNTVKRSIARLKKLEGMEADNS 120 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+L + I Sbjct: 121 FEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARKLGLKI 180 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G Sbjct: 181 FAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEG 221 >gi|323466328|gb|ADX70015.1| 30S ribosomal protein S2 [Lactobacillus helveticus H10] Length = 257 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + G Sbjct: 6 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKTVAEDG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 66 GVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM--SQ 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP Sbjct: 124 DGTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Sbjct: 184 VVAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIVEG 225 >gi|237743354|ref|ZP_04573835.1| SSU ribosomal protein S2P [Fusobacterium sp. 7_1] gi|256028472|ref|ZP_05442306.1| 30S ribosomal protein S2 [Fusobacterium sp. D11] gi|260495026|ref|ZP_05815155.1| ribosomal protein S2 [Fusobacterium sp. 3_1_33] gi|289766393|ref|ZP_06525771.1| SSU ribosomal protein S2P [Fusobacterium sp. D11] gi|229433133|gb|EEO43345.1| SSU ribosomal protein S2P [Fusobacterium sp. 7_1] gi|260197469|gb|EEW94987.1| ribosomal protein S2 [Fusobacterium sp. 3_1_33] gi|289717948|gb|EFD81960.1| SSU ribosomal protein S2P [Fusobacterium sp. D11] Length = 247 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 152/224 (67%), Gaps = 8/224 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM++YIF ERN H+IDL +++ ++ A + + G Sbjct: 5 TMKQLLEAGVHFGHQAKRWNPKMKKYIFTERNGIHVIDLHKSLKKIEDAYEEMRKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK QA + + E A+R+ Y VNS+WLGGM+TN+ T+ + I+++++LE + + Sbjct: 65 GKILFVGTKKQAQEAIKEQAERAGMYYVNSRWLGGMLTNFSTIKKRIERMKELERM---D 121 Query: 127 NQG-----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 122 AEGILDTDYTKKEAAAFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 182 IPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSIMANAIVEG 225 >gi|146319634|ref|YP_001199346.1| 30S ribosomal protein S2 [Streptococcus suis 05ZYH33] gi|145690440|gb|ABP90946.1| 30S ribosomal protein S2 [Streptococcus suis 05ZYH33] Length = 300 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D A Sbjct: 46 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDAAAN 105 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + + Sbjct: 106 EAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM--E 163 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L I Sbjct: 164 EDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLGI 223 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 224 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEG 266 >gi|291542632|emb|CBL15742.1| SSU ribosomal protein S2P [Ruminococcus bromii L2-63] Length = 240 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 153/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL ++V L++A + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKSVKKLEEAYNFVRELSAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D V E A+R+ Y VN++WLGGM+TN+ T+ + I +L+ L + +E Sbjct: 65 KSVLFVGTKKQAQDSVKEEAERAGAYYVNARWLGGMLTNFATIRRRIARLKQLRAM--QE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + +KL++ + GI+DM +P +F+VD +E++A+ EA++L IP Sbjct: 123 DGTFDLLPKKEVIKLNLEIEKLEKFMGGIKDMTEMPGALFIVDPRKERIAVSEAKKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R++ L +A+A I+G Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMANAVIEG 224 >gi|299534754|ref|ZP_07048084.1| 30S ribosomal protein S2 [Lysinibacillus fusiformis ZC1] gi|209573708|sp|B1HQZ0|RS2_LYSSC RecName: Full=30S ribosomal protein S2 gi|298729842|gb|EFI70387.1| 30S ribosomal protein S2 [Lysinibacillus fusiformis ZC1] Length = 239 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 153/223 (68%), Gaps = 7/223 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQVGQD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + + A+RS Y +N +WLGG +TN+ T+ + + +++ +E++ Sbjct: 64 GGKVLFVGTKKQAQEAIKDEAERSGNYYINQRWLGGTLTNFGTIQKRVARMKQIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EAR+L Sbjct: 121 EEEGTFEVLPKKEVIQLKKEHERLIKFLGGIRDMHDLPDVMFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP+V +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPLVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALIE 223 >gi|21242175|ref|NP_641757.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str. 306] gi|294624549|ref|ZP_06703226.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666403|ref|ZP_06731649.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|25009201|sp|Q8PMK5|RS2_XANAC RecName: Full=30S ribosomal protein S2 gi|21107592|gb|AAM36293.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str. 306] gi|292601155|gb|EFF45215.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603845|gb|EFF47250.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 265 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/229 (44%), Positives = 148/229 (64%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA+ Sbjct: 120 --AETDGTFDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +L IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 KLGIPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|229827690|ref|ZP_04453759.1| hypothetical protein GCWU000182_03079 [Abiotrophia defectiva ATCC 49176] gi|229788150|gb|EEP24264.1| hypothetical protein GCWU000182_03079 [Abiotrophia defectiva ATCC 49176] Length = 236 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 148/221 (66%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + I + VA GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDSAYEAIKNIVANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + V + A RS + VN +WLGGM+TN+KT+ I KL++ E++ E+ Sbjct: 61 TILFVGTKKQAQEAVKDEAIRSGMFYVNERWLGGMLTNFKTIKSRIAKLKEYEKM--SED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + I++ +KL++ L GI++M LPD +FVVD +E++ IQEA L IPI Sbjct: 119 GTFDVLPKKEVIQIKKAWEKLEKNLGGIKEMKKLPDAIFVVDPKKERICIQEAHTLNIPI 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + + DTN +PD + YVIPGNDD+ R++ L +A A I+ Sbjct: 179 IGIADTNCDPDELTYVIPGNDDAIRAVRLIVAKMADAVIEA 219 >gi|161831161|ref|YP_001597230.1| 30S ribosomal protein S2 [Coxiella burnetii RSA 331] gi|7388167|sp|Q9X5U8|RS2_COXBU RecName: Full=30S ribosomal protein S2 gi|189044934|sp|A9KBR3|RS2_COXBN RecName: Full=30S ribosomal protein S2 gi|189044935|sp|A9N8R0|RS2_COXBR RecName: Full=30S ribosomal protein S2 gi|4927945|gb|AAD33342.1|AF127534_1 30S ribosomal protein S2 [Coxiella burnetii] gi|161763028|gb|ABX78670.1| ribosomal protein S2 [Coxiella burnetii RSA 331] Length = 313 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 154/222 (69%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + + ++ Sbjct: 4 ITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKEVASK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE L Sbjct: 64 RGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLEN 123 Query: 126 ENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL I Sbjct: 124 EENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGIT 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID Sbjct: 184 VLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDA 225 >gi|148269311|ref|YP_001243771.1| 30S ribosomal protein S2 [Thermotoga petrophila RKU-1] gi|281411991|ref|YP_003346070.1| ribosomal protein S2 [Thermotoga naphthophila RKU-10] gi|147734855|gb|ABQ46195.1| SSU ribosomal protein S2P [Thermotoga petrophila RKU-1] gi|281373094|gb|ADA66656.1| ribosomal protein S2 [Thermotoga naphthophila RKU-10] Length = 260 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 152/223 (68%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + + + G Sbjct: 5 TMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREKASEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + A+R + VN++WLGG++TN+KT+ I+KL +LEE+ E Sbjct: 65 ATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIEKLIELEEM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE+ I R +KL++ L G+++M +PD++++VD +E++A+ EA +L I Sbjct: 122 QSGKLDELPKKEQSRIRRILEKLRKNLGGLKEMRKIPDIIYIVDPRKERIAVAEANKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A+A ++G Sbjct: 182 PIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIANAYLEG 224 >gi|116515082|ref|YP_802711.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285522|sp|Q057T1|RS2_BUCCC RecName: Full=30S ribosomal protein S2 gi|116256936|gb|ABJ90618.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 241 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 149/213 (69%), Gaps = 1/213 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ ++++GV FGH+ WNPKM+ +IF +N HII+L +T+P+ + A+ + T+ G Sbjct: 6 MKNMIKAGVHFGHQTRYWNPKMKPFIFGIKNKVHIINLEKTLPLFRLAINELKKTIKFNG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS + A Q+ VN +WLGGM+TNWKTV QSI KL+DLE + L+ Sbjct: 66 KILFVGTKRSASAAIKSIALSCNQFYVNHRWLGGMLTNWKTVRQSINKLKDLEKQSLDGT 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R +KL+ +L GI++MGGLPD +F++DT E +AI+EA L IP+ A Sbjct: 126 FDKLTKKEVLLRIRLLNKLENSLGGIKNMGGLPDAIFIIDTAYEHIAIREANHLGIPVFA 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +VDTNS+PD V+Y+IPGNDD+ RSI L+ ++++ Sbjct: 186 IVDTNSSPDGVNYIIPGNDDAIRSINLYLNILS 218 >gi|239626518|ref|ZP_04669549.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516664|gb|EEQ56530.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 253 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 148/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDIAAE 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + A+R Y VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 69 GGTILFVGTKKQAQEAIKAEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKQIETM--S 126 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + ++ DKL+R L GI+DM LPD +FVVD +E + +QEA L I Sbjct: 127 EDGTFDVLPKKEVIELRKEWDKLERNLGGIKDMKKLPDAIFVVDPKKEHICVQEAHTLGI 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 187 PLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 229 >gi|325962759|ref|YP_004240665.1| 30S ribosomal protein S2P [Arthrobacter phenanthrenivorans Sphe3] gi|323468846|gb|ADX72531.1| SSU ribosomal protein S2P [Arthrobacter phenanthrenivorans Sphe3] Length = 285 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/236 (47%), Positives = 166/236 (70%), Gaps = 3/236 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TV++ IQ++++LEE+ Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQATRVGQPYVNQRWLGGMLTNFQTVAKRIQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L ++R+ KL+ L GIR++ P ++++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSAYTKKELLLLKRELTKLESNLGGIRNLTKAPSVLWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGA 235 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L +VA A +G IAR + GA Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVVADAVAEGLIARNNRGTGA 236 >gi|58426194|gb|AAW75231.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 375 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 103/230 (44%), Positives = 150/230 (65%), Gaps = 7/230 (3%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+PQ T+RQ+LE+GV FGH+ W+P M +YIF R HII+L +TVP+ A+ +S Sbjct: 108 AMPQVTMRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSS 167 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + G ILF+ TK A + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 168 IAQKRGTILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEA 227 Query: 122 LLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E G K E L++ R+R+KL +L GI++M LPD +FV+D E +AI+EA Sbjct: 228 ---AETDGTFDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEA 284 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++L IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 285 KKLGIPVIAVVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 334 >gi|229844032|ref|ZP_04464173.1| 30S ribosomal protein S2 [Haemophilus influenzae 6P18H1] gi|229813026|gb|EEP48714.1| 30S ribosomal protein S2 [Haemophilus influenzae 6P18H1] Length = 240 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ VA+A +G Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAVAAAVKEG 224 >gi|315641206|ref|ZP_07896283.1| 30S ribosomal protein S2 [Enterococcus italicus DSM 15952] gi|315482973|gb|EFU73492.1| 30S ribosomal protein S2 [Enterococcus italicus DSM 15952] Length = 277 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 19 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKAVAED 78 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + + A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ + Sbjct: 79 GGIALFVGTKKQAQEAIKDEAIRSGQYYVNHRWLGGTLTNWETIQKRVSRLKQINKM--E 136 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I+++R++L++ L GI DM +PD+M++VD +E++A+QEA++L I Sbjct: 137 EDGTFEVLPKKEVVGIKKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAQKLNI 196 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 197 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 239 >gi|157150122|ref|YP_001451251.1| 30S ribosomal protein S2 [Streptococcus gordonii str. Challis substr. CH1] gi|262283598|ref|ZP_06061363.1| ribosomal protein S2 [Streptococcus sp. 2_1_36FAA] gi|189044990|sp|A8AZP1|RS2_STRGC RecName: Full=30S ribosomal protein S2 gi|157074916|gb|ABV09599.1| ribosomal protein S2 [Streptococcus gordonii str. Challis substr. CH1] gi|262260655|gb|EEY79356.1| ribosomal protein S2 [Streptococcus sp. 2_1_36FAA] Length = 260 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A I D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFIRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A+R+ QY +N +WLGG +TNW T+ + + +L++++ + + Sbjct: 64 DAIILFVGTKKQAAEAVKDEAERAGQYYINHRWLGGTLTNWSTIQKRVARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPSNDDAIRAVKLITAKMADAIIEG 224 >gi|116327673|ref|YP_797393.1| 30S ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|209573706|sp|Q04U72|RS2_LEPBJ RecName: Full=30S ribosomal protein S2 gi|116120417|gb|ABJ78460.1| 30S Ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 294 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 152/223 (68%), Gaps = 3/223 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + + Sbjct: 4 ISMKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKLTSE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-- 123 G ++LFV TK QA + A S + +N++W GG++TNW TV +SI +L+ LE + Sbjct: 64 GKKVLFVGTKKQARGAIEREALHSNMFFINNRWPGGLLTNWNTVKKSIARLKKLEAMEAD 123 Query: 124 -NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+L + Sbjct: 124 NSFEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARKLGL 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G Sbjct: 184 KIFAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEG 226 >gi|317132577|ref|YP_004091891.1| ribosomal protein S2 [Ethanoligenens harbinense YUAN-3] gi|315470556|gb|ADU27160.1| ribosomal protein S2 [Ethanoligenens harbinense YUAN-3] Length = 246 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 154/222 (69%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A + G Sbjct: 6 TMKQLLEAGVHFGHQTRRWNPKMTPYIFTERNGIYIIDLQKTVRKLEEAYNFVRKLSEGG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA D + E A+R+ Y VN++WLGGM+TN++T+ + I +L L ++ +E Sbjct: 66 NTILFVGTKKQAQDSIREEAERAGAYFVNARWLGGMLTNFRTIRRRIDRLAQLRKM--EE 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ + +KL++ L GI+DM LP +F+VD +E++A+ EAR+L IP Sbjct: 124 DGTFELLPKKEVVKLKLEIEKLEKYLGGIKDMKKLPAALFIVDPRKERIAVSEARKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R++ L ++A+A ++G Sbjct: 184 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLISSVMANALLEG 225 >gi|84623524|ref|YP_450896.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879150|ref|YP_200616.6| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC10331] gi|166712731|ref|ZP_02243938.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzicola BLS256] gi|123766594|sp|Q2P4A5|RS2_XANOM RecName: Full=30S ribosomal protein S2 gi|209574091|sp|Q5H1E0|RS2_XANOR RecName: Full=30S ribosomal protein S2 gi|84367464|dbj|BAE68622.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 267 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 102/229 (44%), Positives = 149/229 (65%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ W+P M +YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILF+ TK A + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G K E L++ R+R+KL +L GI++M LPD +FV+D E +AI+EA+ Sbjct: 120 --AETDGTFDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +L IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 KLGIPVIAVVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|32491141|ref|NP_871395.1| 30S ribosomal protein S2 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340384|sp|Q8D2G2|RS2_WIGBR RecName: Full=30S ribosomal protein S2 gi|25166348|dbj|BAC24538.1| rpsB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 240 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 101/216 (46%), Positives = 149/216 (68%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++ +++SGV FGH+ WNP M+ +IFC++N HII+L +T+ M + A+ +S Sbjct: 3 NLSMKDMIQSGVHFGHQTRYWNPNMKPFIFCKKNKVHIINLEKTLIMFEIAMNELSKISK 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 R G+ILF+ TK AS+ + +A Q+ VN +WLGGM+TNWKTV QSI++L++LE + Sbjct: 63 RDGKILFIGTKRAASEAIKNSAINCNQFFVNYRWLGGMLTNWKTVRQSIKRLKELESQSK 122 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + TKKE L R +KL+ +L GI++MGGLPD +FV+D EK +I+EA +L IP Sbjct: 123 DGTFKKLTKKEALIRTRTLNKLENSLGGIKNMGGLPDAIFVIDVEHEKTSIKEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 I A+VDTNSNP + +VIPGNDDS R+I L+ V+ Sbjct: 183 IFAIVDTNSNPKDIKFVIPGNDDSIRAIDLYLKTVS 218 >gi|169827153|ref|YP_001697311.1| 30S ribosomal protein S2 [Lysinibacillus sphaericus C3-41] gi|168991641|gb|ACA39181.1| 30S ribosomal protein S2 (BS1) (Vegetative protein 209) (VEG209) [Lysinibacillus sphaericus C3-41] Length = 234 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 152/221 (68%), Gaps = 7/221 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQVGQDGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA + + + A+RS Y +N +WLGG +TN+ T+ + + +++ +E++ E Sbjct: 61 KVLFVGTKKQAQEAIKDEAERSGNYYINQRWLGGTLTNFGTIQKRVARMKQIEKM---EE 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +G KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EAR+L IP Sbjct: 118 EGTFEVLPKKEVIQLKKEHERLIKFLGGIRDMHDLPDVMFVVDPRKERIAVAEARKLNIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +V +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 178 LVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALIE 218 >gi|257878536|ref|ZP_05658189.1| ribosomal protein S2 [Enterococcus faecium 1,230,933] gi|257883171|ref|ZP_05662824.1| ribosomal protein S2 [Enterococcus faecium 1,231,502] gi|257884332|ref|ZP_05663985.1| ribosomal protein S2 [Enterococcus faecium 1,231,501] gi|257887073|ref|ZP_05666726.1| ribosomal protein S2 [Enterococcus faecium 1,141,733] gi|257889267|ref|ZP_05668920.1| ribosomal protein S2 [Enterococcus faecium 1,231,410] gi|257894705|ref|ZP_05674358.1| ribosomal protein S2 [Enterococcus faecium 1,231,408] gi|257895638|ref|ZP_05675291.1| ribosomal protein S2 [Enterococcus faecium Com12] gi|257898228|ref|ZP_05677881.1| ribosomal protein S2 [Enterococcus faecium Com15] gi|258615938|ref|ZP_05713708.1| 30S ribosomal protein S2 [Enterococcus faecium DO] gi|260560121|ref|ZP_05832299.1| ribosomal protein S2 [Enterococcus faecium C68] gi|261208150|ref|ZP_05922824.1| ribosomal protein S2 [Enterococcus faecium TC 6] gi|289566199|ref|ZP_06446632.1| 30S ribosomal protein S2 [Enterococcus faecium D344SRF] gi|293377751|ref|ZP_06623940.1| ribosomal protein S2 [Enterococcus faecium PC4.1] gi|293556639|ref|ZP_06675204.1| ribosomal protein S2 [Enterococcus faecium E1039] gi|293560150|ref|ZP_06676653.1| ribosomal protein S2 [Enterococcus faecium E1162] gi|293567413|ref|ZP_06678760.1| ribosomal protein S2 [Enterococcus faecium E1071] gi|293570624|ref|ZP_06681675.1| ribosomal protein S2 [Enterococcus faecium E980] gi|294613947|ref|ZP_06693882.1| ribosomal protein S2 [Enterococcus faecium E1636] gi|294620326|ref|ZP_06699642.1| ribosomal protein S2 [Enterococcus faecium E1679] gi|294620753|ref|ZP_06699960.1| ribosomal protein S2 [Enterococcus faecium U0317] gi|257812764|gb|EEV41522.1| ribosomal protein S2 [Enterococcus faecium 1,230,933] gi|257818829|gb|EEV46157.1| ribosomal protein S2 [Enterococcus faecium 1,231,502] gi|257820170|gb|EEV47318.1| ribosomal protein S2 [Enterococcus faecium 1,231,501] gi|257823127|gb|EEV50059.1| ribosomal protein S2 [Enterococcus faecium 1,141,733] gi|257825627|gb|EEV52253.1| ribosomal protein S2 [Enterococcus faecium 1,231,410] gi|257831084|gb|EEV57691.1| ribosomal protein S2 [Enterococcus faecium 1,231,408] gi|257832203|gb|EEV58624.1| ribosomal protein S2 [Enterococcus faecium Com12] gi|257836140|gb|EEV61214.1| ribosomal protein S2 [Enterococcus faecium Com15] gi|260073956|gb|EEW62280.1| ribosomal protein S2 [Enterococcus faecium C68] gi|260077584|gb|EEW65301.1| ribosomal protein S2 [Enterococcus faecium TC 6] gi|289161977|gb|EFD09844.1| 30S ribosomal protein S2 [Enterococcus faecium D344SRF] gi|291589810|gb|EFF21611.1| ribosomal protein S2 [Enterococcus faecium E1071] gi|291593222|gb|EFF24796.1| ribosomal protein S2 [Enterococcus faecium E1636] gi|291593438|gb|EFF24996.1| ribosomal protein S2 [Enterococcus faecium E1679] gi|291599733|gb|EFF30743.1| ribosomal protein S2 [Enterococcus faecium U0317] gi|291601174|gb|EFF31461.1| ribosomal protein S2 [Enterococcus faecium E1039] gi|291605883|gb|EFF35314.1| ribosomal protein S2 [Enterococcus faecium E1162] gi|291609295|gb|EFF38566.1| ribosomal protein S2 [Enterococcus faecium E980] gi|292643751|gb|EFF61872.1| ribosomal protein S2 [Enterococcus faecium PC4.1] Length = 260 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKSVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ + I +L+ + + + Sbjct: 64 GGVALFVGTKKQAQEAIKEEATRAGQYFVNHRWLGGTLTNWDTIQKRISRLKQINAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L I Sbjct: 122 EDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITSKMADAFIEG 224 >gi|260589615|ref|ZP_05855528.1| ribosomal protein S2 [Blautia hansenii DSM 20583] gi|260539855|gb|EEX20424.1| ribosomal protein S2 [Blautia hansenii DSM 20583] Length = 256 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 150/223 (67%), Gaps = 7/223 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + I+D A Sbjct: 14 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAIADIAAE 73 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 74 GGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIEAM--- 130 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE +N++++ +KL++ L GI++M LPD +F+VD +E++ +QEA L Sbjct: 131 EADGTFDVLPKKEVINLKKELEKLQKNLGGIKEMKKLPDAIFIVDPKKERICVQEAHTLG 190 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 191 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 233 >gi|323701845|ref|ZP_08113515.1| ribosomal protein S2 [Desulfotomaculum nigrificans DSM 574] gi|323533149|gb|EGB23018.1| ribosomal protein S2 [Desulfotomaculum nigrificans DSM 574] Length = 232 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 151/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVRKVEEAYEFVKQLAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG I+FV TK QA + V E A+R Y VN +WLGGM+TN++T+ I +L +LE + + Sbjct: 64 GGSIMFVGTKKQAQEAVKEEAERCGMYYVNQRWLGGMLTNFQTIRHRIDRLHELERM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + +++KL + L GI++M LP +F++D +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVAQLLHEKEKLDKFLGGIKNMRRLPGALFIIDPRKERIAVAEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKIADAVLEG 224 >gi|317051927|ref|YP_004113043.1| 30S ribosomal protein S2 [Desulfurispirillum indicum S5] gi|316947011|gb|ADU66487.1| ribosomal protein S2 [Desulfurispirillum indicum S5] Length = 256 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 147/223 (65%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+++LLE+GV FGH+ WNPKM+RYIF RN HIIDL +T+ + ++A Sbjct: 1 MPTITMKELLEAGVHFGHQTRRWNPKMKRYIFSSRNGIHIIDLQKTLKLFKRAYDEARLD 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA D + E A R Y +N +WLGG++TN+ T+ + +++L++L L Sbjct: 61 ARGGAKFLFVGTKKQAQDSIKEEALRCGMYFINHRWLGGLLTNFGTIRKRVERLKNLSAL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G++K E +E++R+KL+R L GIRDM +PD+M ++D E A+ EAR L I Sbjct: 121 AEEGYPGYSKLEASRMEKEREKLERNLGGIRDMEKIPDVMVIIDPKNEHNAVLEARNLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +A+VD+N +PD +D+ IPGNDD+ R+I L C +A A ++G Sbjct: 181 KTIAIVDSNCDPDYIDFPIPGNDDAIRAIRLICTKIADAILEG 223 >gi|53805191|ref|YP_113086.1| 30S ribosomal protein S2 [Methylococcus capsulatus str. Bath] gi|61215446|sp|Q60BB0|RS2_METCA RecName: Full=30S ribosomal protein S2 gi|53758952|gb|AAU93243.1| ribosomal protein S2 [Methylococcus capsulatus str. Bath] Length = 256 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 105/226 (46%), Positives = 150/226 (66%), Gaps = 9/226 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM +IF R+N HII+L +T+P+ A++ + A Sbjct: 5 TMRQMLEAGVHFGHQTRYWNPKMAPFIFGARSNIHIINLEKTLPLFNDAMKYLEQVAANR 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL---- 122 G+ILFV TK + E A+R VN +WLGGM+TN+KT+ SI +++DL+ + Sbjct: 65 GKILFVGTKKTMRKVIEEEARRCGMPYVNHRWLGGMLTNFKTIKASIARMKDLQAMRDDG 124 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LN+ F+KKE L + R+ +KL + GI DM LPD+MF++DT EK A+ EAR+L Sbjct: 125 RLNR----FSKKEALGMMRELEKLVCNVGGIGDMDRLPDVMFIIDTGYEKNAVSEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+V VVDTN++P +DYVIPGNDDS R++ L+ A+A + G A Sbjct: 181 IPVVGVVDTNNSPVGIDYVIPGNDDSIRAVQLYAQSAATAILRGKA 226 >gi|32034392|ref|ZP_00134582.1| COG0052: Ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|165975980|ref|YP_001651573.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149879|ref|YP_001968404.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251567|ref|ZP_07337741.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252197|ref|ZP_07338365.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249774|ref|ZP_07531752.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252120|ref|ZP_07534019.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256588|ref|ZP_07538369.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307263203|ref|ZP_07544823.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238687535|sp|B0BUC4|RS2_ACTPJ RecName: Full=30S ribosomal protein S2 gi|238692330|sp|B3GXB0|RS2_ACTP7 RecName: Full=30S ribosomal protein S2 gi|165876081|gb|ABY69129.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915010|gb|ACE61262.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648980|gb|EFL79168.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649565|gb|EFL79747.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858189|gb|EFM90267.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860420|gb|EFM92434.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864998|gb|EFM96900.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306871420|gb|EFN03144.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 238 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D A+A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEG 224 >gi|269792353|ref|YP_003317257.1| 30S ribosomal protein S2 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099988|gb|ACZ18975.1| ribosomal protein S2 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 281 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 108/268 (40%), Positives = 170/268 (63%), Gaps = 14/268 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L++A + + G Sbjct: 5 SMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKGLERAYSFVREVAKEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + A R Q+ +N +WLGG++TN+ T+ + + ++ +L+++ E Sbjct: 65 GSMLFVGTKRQAQEPIRNEALRCGQFYINQRWLGGLLTNFATIRRRVNRMVELQKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G + KKE + + ++R+KL++ L GI+DM +PD +F++D RE +AI EA +L I Sbjct: 122 ADGTINRYPKKEIIQLRKEREKLEKYLSGIKDMRDVPDALFIIDPRRENIAILEAAKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA------AIDGIARQHSYMGAD 236 P+VA+VDTN +P+L+ Y IPGNDD+ R+I L L+ASA +DG+A + Sbjct: 182 PVVAIVDTNCDPELITYPIPGNDDAIRAIELITGLMASAFIEGRQGVDGMATPQADQEEA 241 Query: 237 TKSAGETVVHSKEGMQLEEDSQSSESSV 264 A E V+ +E + +E S+ +E+ V Sbjct: 242 VSGAAEDVIEIREKLH-DEYSEVAETLV 268 >gi|220903626|ref|YP_002478938.1| 30S ribosomal protein S2 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254764472|sp|B8J3M5|RS2_DESDA RecName: Full=30S ribosomal protein S2 gi|219867925|gb|ACL48260.1| ribosomal protein S2 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 258 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 111/247 (44%), Positives = 165/247 (66%), Gaps = 9/247 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A + D VA+G Sbjct: 5 SMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLFRIAHDKVVDIVAKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G++LF+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +S+ +L+ LE + + Sbjct: 65 GKVLFIGTKRQAQEAVAAEAGRAGQFFVTNRWMGGTLTNFVTIQKSVDRLKKLESMFADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L +ER+ KL+ L GI++M LP + F++D +RE +A++E R+L IPI+ Sbjct: 125 SINRYQKKEILLLERELAKLEETLGGIKNMDRLPQIAFIIDPHREDIAVKECRKLGIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 AV DTN +PD++DY+IPGNDD+ R+I LF A A ++G A MG D K GET Sbjct: 185 AVTDTNCDPDVIDYIIPGNDDAIRAIKLFVAAFAEACMEGEA-----MGKDHK--GET-A 236 Query: 246 HSKEGMQ 252 +++E MQ Sbjct: 237 NAEEAMQ 243 >gi|153855563|ref|ZP_01996679.1| hypothetical protein DORLON_02697 [Dorea longicatena DSM 13814] gi|149751984|gb|EDM61915.1| hypothetical protein DORLON_02697 [Dorea longicatena DSM 13814] Length = 273 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 150/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q ++D A Sbjct: 32 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYQAVADIAAE 91 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 92 GGSILFVGTKKQAQDAIKVEAERCGMYYVNERWLGGMLTNFKTIKSRIARLKNIERM--S 149 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ DKL++ L GI+DM LPD +FVVD +E++ +QEA L I Sbjct: 150 EDGTFDVLPKKEVIQLKKEWDKLEKNLGGIKDMKTLPDAIFVVDPKKERICVQEAHTLGI 209 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A ++ Sbjct: 210 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVVE 251 >gi|227892611|ref|ZP_04010416.1| ribosomal protein S2 [Lactobacillus ultunensis DSM 16047] gi|227865596|gb|EEJ73017.1| ribosomal protein S2 [Lactobacillus ultunensis DSM 16047] Length = 257 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + G Sbjct: 6 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAQDG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 66 GVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVRRLKQLKEM--SQ 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP Sbjct: 124 DGTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Sbjct: 184 VVAMVDTNTDPDPIDVVIPSNDDAIRAIRLISGAMADAIVEG 225 >gi|145628158|ref|ZP_01783959.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.1-21] gi|144979933|gb|EDJ89592.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.1-21] Length = 240 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFEKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 224 >gi|289450066|ref|YP_003475252.1| 30S ribosomal protein S2 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184613|gb|ADC91038.1| ribosomal protein S2 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 262 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 103/238 (43%), Positives = 159/238 (66%), Gaps = 7/238 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL +TV ++A + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKTVRKAEEAYNFMREVAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA D + E A+R + +N++WLGG +TN+ T+ + I +L +L ++ + Sbjct: 64 GGKVLFVGTKKQAQDSIKEEAERCGMFYINNRWLGGTLTNYTTIRKRIGRLFELHKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE ++ + +KL + L GI++M G+PD +FVVD +E +A+ EARRL + Sbjct: 122 EDGTFDLLPKKEVAKLKLEMEKLDKNLGGIKEMNGIPDCLFVVDPKKEHIAVMEARRLGV 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 P+V +VDTN +P+ VDYVIPGNDD+ R++ L +A A I+G +Q + A+T+ A Sbjct: 182 PVVGIVDTNCDPEEVDYVIPGNDDAIRAVKLIAGKMADAVIEG--KQGEDVVAETEQA 237 >gi|227551766|ref|ZP_03981815.1| 30S ribosomal protein S2 [Enterococcus faecium TX1330] gi|227179071|gb|EEI60043.1| 30S ribosomal protein S2 [Enterococcus faecium TX1330] Length = 300 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 44 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKSVAEE 103 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ + I +L+ + + + Sbjct: 104 GGVALFVGTKKQAQEAIKEEATRAGQYFVNHRWLGGTLTNWDTIQKRISRLKQINAM--E 161 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L I Sbjct: 162 EDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLNI 221 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 222 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITSKMADAFIEG 264 >gi|153207687|ref|ZP_01946334.1| ribosomal protein S2 [Coxiella burnetii 'MSU Goat Q177'] gi|120576383|gb|EAX33007.1| ribosomal protein S2 [Coxiella burnetii 'MSU Goat Q177'] Length = 313 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 153/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + ++ Sbjct: 4 ITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKVASK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE L Sbjct: 64 RGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLEN 123 Query: 126 ENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL I Sbjct: 124 EENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGIT 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID Sbjct: 184 VLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDA 225 >gi|91788557|ref|YP_549509.1| 30S ribosomal protein S2 [Polaromonas sp. JS666] gi|123164796|sp|Q12A31|RS2_POLSJ RecName: Full=30S ribosomal protein S2 gi|91697782|gb|ABE44611.1| SSU ribosomal protein S2P [Polaromonas sp. JS666] Length = 250 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 150/221 (67%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+GV FGH+ WNPKM YIF RN HII+L +++PM Q A++ A Sbjct: 4 SMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIINLEKSLPMFQDAMKFAKQLSANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V AKR+ V+ +WLGGM+TN+KTV SI++L++++ Sbjct: 64 GTILMVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L +R+ +KL++ + GI+DM LPD +FV+D K+AI EA++L IP++ Sbjct: 124 LDSISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVD+N +P +DYVIPGNDDSS+++AL+ +A A ++G A Sbjct: 184 VVDSNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRA 224 >gi|307261022|ref|ZP_07542704.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869324|gb|EFN01119.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 238 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D A+A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEG 224 >gi|291519560|emb|CBK74781.1| SSU ribosomal protein S2P [Butyrivibrio fibrisolvens 16/4] Length = 242 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 148/221 (66%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A VI D + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYDVIFDIAQQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KTV I +L+++E++ + Sbjct: 64 GGNILFVGTKKQAQDAIASEAERCGMYYVNERWLGGMLTNFKTVQTRIARLKEIEKMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++++++KL + L GI++M +PD +F++D +E + +QEA L IP+ Sbjct: 124 GVFEQLPKKEVILLKKEQEKLTKVLGGIKEMNRIPDAIFIIDPKKEHICVQEAHALGIPL 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V V DTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 184 VGVCDTNCDPDELDYVIPGNDDAIRAVKLIVAKMADAVIEA 224 >gi|313905944|ref|ZP_07839299.1| ribosomal protein S2 [Eubacterium cellulosolvens 6] gi|313469204|gb|EFR64551.1| ribosomal protein S2 [Eubacterium cellulosolvens 6] Length = 248 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/233 (45%), Positives = 156/233 (66%), Gaps = 7/233 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH WNPKM YI+ ERN +IIDL ++V M+ A + I+D VA Sbjct: 4 ISMKQLLEAGVHFGHLTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYRAIADVVAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GGRILFV TK QA D + A+R ++ VN +WLGGM+TN+KTV I +L+++E++ + Sbjct: 64 GGRILFVGTKKQAQDTIKAEAERCGEFFVNERWLGGMLTNFKTVQTRIARLKEIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + ++ +KL++ + GI+DM +PD +FVVD +EK+ +QEA L I Sbjct: 122 ENGTFDVLPKKEVAGLLKELEKLQKNIGGIKDMKKIPDAIFVVDPKKEKICVQEAHNLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ A+Q M A Sbjct: 182 TLIGICDTNCDPEDLDYVIPGNDDAIRAVKLLVSKMADAVIE--AKQGQAMDA 232 >gi|229845964|ref|ZP_04466076.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] gi|229810968|gb|EEP46685.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] Length = 240 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFEKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGVDHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 224 >gi|224283169|ref|ZP_03646491.1| 30S ribosomal protein S2 [Bifidobacterium bifidum NCIMB 41171] gi|310287534|ref|YP_003938792.1| SSU ribosomal protein S2P [Bifidobacterium bifidum S17] gi|311064447|ref|YP_003971172.1| 30S ribosomal protein S2P RpsB [Bifidobacterium bifidum PRL2010] gi|309251470|gb|ADO53218.1| SSU ribosomal protein S2P [Bifidobacterium bifidum S17] gi|310866766|gb|ADP36135.1| RpsB SSU ribosomal protein S2P [Bifidobacterium bifidum PRL2010] Length = 274 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 113/243 (46%), Positives = 162/243 (66%), Gaps = 5/243 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++GV FGH+ WNPKM++YI ERN HII+L +++ ++ KA I T Sbjct: 1 MAQITMSEMLKAGVHFGHQTRRWNPKMKQYILMERNGIHIINLFKSLELIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVQTQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL++ L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVHGSGLTKKELLLLEREKDKLEKQLGGIRNMVRTPSAMFVVDINKESLAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ VDY IP NDD+ R I L L+A A DG+ + G K+ Sbjct: 181 GIPVVALVDTNTDPESVDYPIPANDDAIRGIELLTSLMADAVADGLLERS---GRAAKAE 237 Query: 241 GET 243 GET Sbjct: 238 GET 240 >gi|310779564|ref|YP_003967897.1| SSU ribosomal protein S2P [Ilyobacter polytropus DSM 2926] gi|309748887|gb|ADO83549.1| SSU ribosomal protein S2P [Ilyobacter polytropus DSM 2926] Length = 248 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 153/222 (68%), Gaps = 4/222 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A ++ A G Sbjct: 5 TMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYSILRGIAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A+R+ Y +N++WLGGM+TN++T+ I++L+ LE ++K+ Sbjct: 65 GSVLFVGTKKQAQDSIREQAERAGMYYINNRWLGGMLTNFETIKARIERLKMLET-MDKD 123 Query: 127 ---NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +TKKE + ++ KL + L GI++M LP +FVVD +E LAI EA +L IP Sbjct: 124 GTLDDSYTKKEAAQLRKELAKLSKNLSGIKNMKKLPAAIFVVDVKKEALAITEAVKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++A+VD+N +P+ + Y IP NDD+ RS+ L +VA+A I+G Sbjct: 184 VIAMVDSNVDPEPITYPIPANDDAIRSVKLMSTIVANAVIEG 225 >gi|269122999|ref|YP_003305576.1| 30S ribosomal protein S2 [Streptobacillus moniliformis DSM 12112] gi|268314325|gb|ACZ00699.1| ribosomal protein S2 [Streptobacillus moniliformis DSM 12112] Length = 257 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 97/238 (40%), Positives = 161/238 (67%), Gaps = 3/238 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE G FGH+ WNPKM+ YI+ ERN HI+DL QT+ +KA + + + + Sbjct: 4 ISMKELLEVGAHFGHQAKRWNPKMKPYIYAERNGLHILDLQQTLVSTEKAYEFVREIASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-- 123 GG++LFV TK QA + + E A+R + VN +WLGG++TN +T+ + ++KL++LEE+ Sbjct: 64 GGKVLFVGTKKQAQEAMKEEAERCGGFYVNQRWLGGLLTNLETIKKRVKKLKELEEMEAD 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++ +TKKE + ++ +KL++ + GI++M LP +FVVD +E LA++EA +L IP Sbjct: 124 GTLDEAYTKKEAAILRKEMEKLQKNVGGIKEMNTLPAALFVVDIKKEFLALEEAAKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS-YMGADTKSA 240 ++A++D+N +PDLV Y IP NDD+ RSI LF +++ A ++ Q + Y A+ ++A Sbjct: 184 VIALIDSNVDPDLVTYRIPANDDAIRSIKLFAKVISQAVVEANGGQENEYTPAELETA 241 >gi|314937495|ref|ZP_07844828.1| ribosomal protein S2 [Enterococcus faecium TX0133a04] gi|314942154|ref|ZP_07849008.1| ribosomal protein S2 [Enterococcus faecium TX0133C] gi|314947506|ref|ZP_07850921.1| ribosomal protein S2 [Enterococcus faecium TX0082] gi|314951493|ref|ZP_07854542.1| ribosomal protein S2 [Enterococcus faecium TX0133A] gi|314992583|ref|ZP_07858001.1| ribosomal protein S2 [Enterococcus faecium TX0133B] gi|314995482|ref|ZP_07860582.1| ribosomal protein S2 [Enterococcus faecium TX0133a01] gi|313590316|gb|EFR69161.1| ribosomal protein S2 [Enterococcus faecium TX0133a01] gi|313592875|gb|EFR71720.1| ribosomal protein S2 [Enterococcus faecium TX0133B] gi|313596333|gb|EFR75178.1| ribosomal protein S2 [Enterococcus faecium TX0133A] gi|313599077|gb|EFR77922.1| ribosomal protein S2 [Enterococcus faecium TX0133C] gi|313643136|gb|EFS07716.1| ribosomal protein S2 [Enterococcus faecium TX0133a04] gi|313646056|gb|EFS10636.1| ribosomal protein S2 [Enterococcus faecium TX0082] Length = 300 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 44 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKSVAEE 103 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ + I +L+ + + + Sbjct: 104 GGVALFVGTKKQAQEAIKEEATRAGQYFVNHRWLGGTLTNWDTIQKRISRLKQINAM--E 161 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L I Sbjct: 162 EDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLNI 221 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 222 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITSKMADAFIEG 264 >gi|89098612|ref|ZP_01171494.1| 30S ribosomal protein S2 [Bacillus sp. NRRL B-14911] gi|89086574|gb|EAR65693.1| 30S ribosomal protein S2 [Bacillus sp. NRRL B-14911] Length = 233 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 151/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNYVKELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D V E A RS Y VN +WLGG +TN++T+ + I +L+D+E + Sbjct: 64 GGTILFVGTKKQAQDSVKEEALRSGMYFVNQRWLGGTLTNFETIQKRITRLKDIERM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + +++++L++ L GI+DM LPD +F++D +E++A+ EA +L I Sbjct: 122 EDGTFEVLPKKEVVQLRKEQERLEKFLGGIKDMKTLPDALFIIDPRKERIAVAEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEA 224 >gi|307243338|ref|ZP_07525502.1| ribosomal protein S2 [Peptostreptococcus stomatis DSM 17678] gi|306493285|gb|EFM65274.1| ribosomal protein S2 [Peptostreptococcus stomatis DSM 17678] Length = 253 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 106/227 (46%), Positives = 151/227 (66%), Gaps = 7/227 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV + +A + + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLQKTVKKIDEAYKFMQEVAET 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E A+R Y VN +WLGGM+TN KT+ IQKLR+LE + + Sbjct: 64 GKPILFVGTKKQAQEAIKEEAQRCGMYFVNERWLGGMLTNHKTIKTRIQKLRELEAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + +++KL++ L G++DM LP +FVVD +E +AIQEA RL I Sbjct: 122 EDGTFDVLPKKEVIKLRAEKEKLEKFLGGVKDMPELPAALFVVDPRKENIAIQEAHRLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 P++ VDTN +PD +DY IP NDD+ R++ L +ASA I+ ARQ Sbjct: 182 PVIGTVDTNCDPDEIDYPIPANDDAIRAVKLITGAMASAIIE--ARQ 226 >gi|307718988|ref|YP_003874520.1| 30S ribosomal protein S2 [Spirochaeta thermophila DSM 6192] gi|306532713|gb|ADN02247.1| 30S ribosomal protein S2 [Spirochaeta thermophila DSM 6192] Length = 316 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 153/219 (69%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A +V+ TV G Sbjct: 5 TMKNLLESGVHFGHQKRRWDPRMKKYIFAERNGIHIIDLQKTIQAIKEAYEVVRKTVLSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + A+R + VN +WLGG +TN++T+ +SI +L+ LE++ ++ Sbjct: 65 KSVLFVGTKRQAQAAIQREAERCGMFYVNHRWLGGTLTNFETIKKSILRLKKLEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE + +++ +L+R L GI++M LP ++F++DT E +A+ EA++L IPI+ Sbjct: 125 TFATMSKKEVSRLMKEKARLQRNLGGIKEMKELPGVVFIIDTKHEAIAVAEAKKLGIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VVDTN NP+++D+ IPGNDD+ R+I LF ++A A I+ Sbjct: 185 GVVDTNCNPEIIDHPIPGNDDAIRAINLFSKIIADAVIE 223 >gi|152978450|ref|YP_001344079.1| 30S ribosomal protein S2 [Actinobacillus succinogenes 130Z] gi|171704232|sp|A6VME7|RS2_ACTSZ RecName: Full=30S ribosomal protein S2 gi|150840173|gb|ABR74144.1| ribosomal protein S2 [Actinobacillus succinogenes 130Z] Length = 241 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R+++ +GV FGH+ WNPKM+ +IF RN HI++L +T+P+ +AL ++ Sbjct: 1 MAQVSMREMINAGVHFGHQTRYWNPKMKPFIFGARNGVHIVNLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ANNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L+ R+ KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALDRSREMAKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSSPDNVDFVIPGNDDATRAIQLYLTAAAAAVKEG 224 >gi|331083047|ref|ZP_08332165.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 6_1_63FAA] gi|330405448|gb|EGG84982.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 6_1_63FAA] Length = 246 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 150/224 (66%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + I+D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAIADIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 64 GGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIEAM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE +N++++ +KL++ L GI++M LPD +F+VD +E++ +QEA L Sbjct: 121 EADGTFDVLPKKEVINLKKELEKLQKNLGGIKEMKKLPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|21230832|ref|NP_636749.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|25009200|sp|Q8PAV2|RS2_XANCP RecName: Full=30S ribosomal protein S2 gi|21112436|gb|AAM40673.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 275 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPK+ YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKLAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|315186474|gb|EFU20234.1| SSU ribosomal protein S2P [Spirochaeta thermophila DSM 6578] Length = 315 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 153/219 (69%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A +V+ TV G Sbjct: 5 TMKNLLESGVHFGHQKRRWDPRMKKYIFAERNGIHIIDLQKTIQAIKEAYEVVRKTVLSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + A+R + VN +WLGG +TN++T+ +SI +L+ LE++ ++ Sbjct: 65 KSVLFVGTKRQAQAAIQREAERCGMFYVNHRWLGGTLTNFETIKKSILRLKKLEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE + +++ +L+R L GI++M LP ++F++DT E +A+ EA++L IPI+ Sbjct: 125 TFATMSKKEVSRLMKEKARLQRNLGGIKEMKELPGVVFIIDTKHEAIAVAEAKKLGIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VVDTN NP+++D+ IPGNDD+ R+I LF ++A A I+ Sbjct: 185 GVVDTNCNPEIIDHPIPGNDDAIRAINLFTKIIADAVIE 223 >gi|150020818|ref|YP_001306172.1| 30S ribosomal protein S2 [Thermosipho melanesiensis BI429] gi|166226766|sp|A6LLI6|RS2_THEM4 RecName: Full=30S ribosomal protein S2 gi|149793339|gb|ABR30787.1| ribosomal protein S2 [Thermosipho melanesiensis BI429] Length = 257 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 100/220 (45%), Positives = 149/220 (67%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGHR WNPKM+ YIF R +IIDL +T +L++A + D A G Sbjct: 5 TMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLEEAYNFVRDKAAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G ILFV TK QA + + A+R + VN +WLGG++TN++T+ + I KL +LEE+ N Sbjct: 65 GTILFVGTKKQAQQVIKQEAERCGAFYVNHRWLGGLLTNFQTIRKRIDKLIELEEMEANG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E KKE+ + R DKL++ L G+++M +PD++++VD +E+ A+ EA L+IP V Sbjct: 125 EFDNLPKKEQSRLRRILDKLRKNLGGLKEMDRIPDVIYIVDPRKERNAVYEANLLKIPTV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PD +DY+IPGNDD+ R+I L +A A ++G Sbjct: 185 SIVDTNCDPDEIDYIIPGNDDAIRAIQLITSKIADAYLEG 224 >gi|116330588|ref|YP_800306.1| 30S ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124277|gb|ABJ75548.1| 30S Ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 289 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 151/221 (68%), Gaps = 3/221 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + + G Sbjct: 1 MKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKLTSEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL---N 124 ++LFV TK QA + A S + +N++W GG++TNW TV +SI +L+ LE + + Sbjct: 61 KVLFVGTKKQARGAIEREALHSNMFFINNRWPGGLLTNWNTVKKSIARLKKLEAMEADNS 120 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+L + I Sbjct: 121 FEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARKLGLKI 180 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G Sbjct: 181 FAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEG 221 >gi|23099041|ref|NP_692507.1| 30S ribosomal protein S2 [Oceanobacillus iheyensis HTE831] gi|38258375|sp|Q8EQV3|RS2_OCEIH RecName: Full=30S ribosomal protein S2 gi|22777269|dbj|BAC13542.1| 30S ribosomal protein S2 [Oceanobacillus iheyensis HTE831] Length = 254 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 154/225 (68%), Gaps = 5/225 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MAAISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNYVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG ILFV TK QA D V + A RS Y VN +WLGG +TN++T+ + I +L+ +E++ Sbjct: 61 ASNGGTILFVGTKKQAQDSVRDEAIRSGMYFVNQRWLGGTLTNFQTIRKRINRLKSIEKM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +E+ F KKE +N+ +++++L + L GI++M LPD +FV+D +E++AI EA + Sbjct: 121 --EEDGTFEVLPKKEVVNLLKEKERLVKFLGGIKEMNKLPDALFVIDPRKERIAIAEAHK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 L IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 179 LNIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAILE 223 >gi|225849793|ref|YP_002730027.1| 30S ribosomal protein S2 [Persephonella marina EX-H1] gi|225644933|gb|ACO03119.1| ribosomal protein S2 [Persephonella marina EX-H1] Length = 300 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 107/225 (47%), Positives = 160/225 (71%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+R+LLE+GV FGH+ WNPKM YIF +RN HIIDL++T+P+ + A + + D VA Sbjct: 4 EITMRELLEAGVHFGHQTRRWNPKMAPYIFTKRNGIHIIDLAKTIPLFKVAWEFVRDEVA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ILFV TK QA + E A R Y +N +WLGG++TN+ TV +S+ KL+ LE + Sbjct: 64 KGSDILFVGTKKQAQQIIEEQATRCGAYYINERWLGGLLTNFTTVRKSVAKLKKLETM-- 121 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G KKE + +++K++KL++ L GI+DM +PD++F+VDT RE+LA++EA++L Sbjct: 122 -EAEGAFEILPKKEVVKLKKKKEKLEKYLKGIKDMEKIPDIIFIVDTVREELAVKEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+ DTN +PD++DY IPGNDD+ ++I L +A A I+G Sbjct: 181 GIPVVAIADTNCDPDMIDYPIPGNDDAIKAINLITTKIADAVIEG 225 >gi|169830790|ref|YP_001716772.1| 30S ribosomal protein S2 [Candidatus Desulforudis audaxviator MP104C] gi|238688233|sp|B1I2K0|RS2_DESAP RecName: Full=30S ribosomal protein S2 gi|169637634|gb|ACA59140.1| ribosomal protein S2 [Candidatus Desulforudis audaxviator MP104C] Length = 244 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++A I VA G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVRKIEEAYNFIKQIVAEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA V+E A R + VN +WLGGM+TN++T+ + I +L++LE++ E Sbjct: 65 QTVLFVGTKKQAQLTVVEEAGRCGMFYVNQRWLGGMLTNFQTIRRRIDRLKELEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + ++ +L++ L GI+DM LP +FV+D +E++A+ EAR+L I Sbjct: 122 AEGRFEVLPKKEVAELMHEKQRLEKYLKGIKDMTKLPGALFVIDPRKERIAVAEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DY+IPGNDD+ R++ L +A A ++G Sbjct: 182 PIVAIVDTNCDPDEIDYIIPGNDDAIRAVRLLTSRMADAVLEG 224 >gi|153816486|ref|ZP_01969154.1| hypothetical protein RUMTOR_02739 [Ruminococcus torques ATCC 27756] gi|317500766|ref|ZP_07958983.1| ribosomal protein S2 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089756|ref|ZP_08338650.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846182|gb|EDK23100.1| hypothetical protein RUMTOR_02739 [Ruminococcus torques ATCC 27756] gi|316897859|gb|EFV19913.1| ribosomal protein S2 [Lachnospiraceae bacterium 8_1_57FAA] gi|330403639|gb|EGG83194.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 3_1_46FAA] Length = 248 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 150/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I++L+++E + Sbjct: 64 GGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKEIETM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ KL++ L GI+DM LPD +F+VD +E++ +QEA L I Sbjct: 122 EDGTFDVLPKKEVIELKKEWAKLEKNLGGIKDMKRLPDAIFIVDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 182 PLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 223 >gi|209363842|ref|YP_001424015.2| 30S ribosomal protein S2 [Coxiella burnetii Dugway 5J108-111] gi|212212243|ref|YP_002303179.1| 30S ribosomal protein S2 [Coxiella burnetii CbuG_Q212] gi|215919172|ref|NP_820375.2| 30S ribosomal protein S2 [Coxiella burnetii RSA 493] gi|206584056|gb|AAO90889.2| SSU ribosomal protein S2P [Coxiella burnetii RSA 493] gi|207081775|gb|ABS78321.2| SSU ribosomal protein S2P [Coxiella burnetii Dugway 5J108-111] gi|212010653|gb|ACJ18034.1| SSU ribosomal protein S2P [Coxiella burnetii CbuG_Q212] Length = 359 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 154/222 (69%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + + ++ Sbjct: 50 ITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKEVASK 109 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE L Sbjct: 110 RGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLEN 169 Query: 126 ENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL I Sbjct: 170 EENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGIT 229 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID Sbjct: 230 VLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDA 271 >gi|210609953|ref|ZP_03288182.1| hypothetical protein CLONEX_00366 [Clostridium nexile DSM 1787] gi|210152699|gb|EEA83705.1| hypothetical protein CLONEX_00366 [Clostridium nexile DSM 1787] Length = 253 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 149/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ISD A Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAISDIAAE 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + Sbjct: 69 GGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERM--A 126 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I+++ +KL++ L GI+DM PD +FVVD +E++ +QEA L I Sbjct: 127 EDGTFDVLPKKEVIEIKKEWEKLEKNLGGIKDMKKAPDAIFVVDPKKERICVQEAHTLGI 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 187 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVAKMADAVIE 228 >gi|309791086|ref|ZP_07685621.1| ribosomal protein S2 [Oscillochloris trichoides DG6] gi|308226870|gb|EFO80563.1| ribosomal protein S2 [Oscillochloris trichoides DG6] Length = 239 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 147/226 (65%), Gaps = 1/226 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I+ LLE+G FGH+ WNPKM YIF RN HIIDL +TV + A + ++D ARG Sbjct: 10 SIKALLEAGAHFGHQTNRWNPKMRPYIFTARNGIHIIDLQKTVAGVTAAYRFVADLTARG 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK QA + + E A R+ QY + +WLGG +TN+ T+ +++L DLE ++ Sbjct: 70 EKILFVGTKKQAQEAIAEEASRAGQYYITQRWLGGTLTNFTTIRARLKRLSDLEAQRDRG 129 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TK E L +E + KL R GI+ M LP +FV+D ++E LA+QEA ++ +P+V Sbjct: 130 DFARLTKAEGLKLEEEIGKLNRVFGGIKTMDRLPGALFVIDPHKESLAVQEATKVGVPVV 189 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 A+VDTN +PDL+DYVIP NDD+ R I L +A AA +G+ R+ S Sbjct: 190 AMVDTNCDPDLIDYVIPCNDDAIRGIRLMTSKMADAAQEGMDRRQS 235 >gi|220912154|ref|YP_002487463.1| 30S ribosomal protein S2 [Arthrobacter chlorophenolicus A6] gi|254764452|sp|B8HFN5|RS2_ARTCA RecName: Full=30S ribosomal protein S2 gi|219859032|gb|ACL39374.1| ribosomal protein S2 [Arthrobacter chlorophenolicus A6] Length = 291 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 115/243 (47%), Positives = 169/243 (69%), Gaps = 5/243 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TV++ IQ++++LEE+ Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQATRVGQPYVNQRWLGGMLTNFQTVAKRIQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L ++R+ KL+ L GIR++ P ++++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSAYTKKELLLLKRELTKLESNLGGIRNLTKAPSVLWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L +VA A +G IAR + G+ T Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVVADAVAEGLIARNNR--GSGTTE 238 Query: 240 AGE 242 A E Sbjct: 239 APE 241 >gi|296272319|ref|YP_003654950.1| 30S ribosomal protein S2 [Arcobacter nitrofigilis DSM 7299] gi|296096493|gb|ADG92443.1| ribosomal protein S2 [Arcobacter nitrofigilis DSM 7299] Length = 266 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 114/239 (47%), Positives = 158/239 (66%), Gaps = 6/239 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + +I D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRYTYTLIRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++FV TK QAS V +AA VN +WLGGM+TN+ T+ +SI+KL ++++ +E Sbjct: 63 QTMMFVGTKKQASQAVKDAAISCGMPYVNHRWLGGMLTNYGTIKKSIRKLEIIKKM-REE 121 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 Q TKKE L + RK +KL+ L GI+DM LPD+MFV+D +EK+AI EARRL I + Sbjct: 122 GQLDLLTKKEALMLSRKEEKLELYLGGIKDMTKLPDMMFVLDAVKEKIAIAEARRLGITV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 VA +DTN +PD+VD+ IPGNDD+ RSI LFC +A+A +G A +Y A+ + ET Sbjct: 182 VAPLDTNCDPDVVDWPIPGNDDAIRSIQLFCTEMAAAMNEGKA---AYAEANGEVVEET 237 >gi|253578261|ref|ZP_04855533.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850579|gb|EES78537.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 247 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 108/254 (42%), Positives = 161/254 (63%), Gaps = 14/254 (5%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A I+D VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAIADIVAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Q+ VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 64 GGSILFVGTKKQAQDAIKTEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKEIEAM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ KL++ + GI++M LPD +F+VD +E++ +QEA L Sbjct: 121 EADGTFDVLPKKEVIELKKELAKLQKNIGGIKEMKRLPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ A+Q + + G Sbjct: 181 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE--AKQGT-----ADADG 233 Query: 242 ETVVHSKEGMQLEE 255 E S+E EE Sbjct: 234 EIEAESEEFAATEE 247 >gi|331091301|ref|ZP_08340141.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404462|gb|EGG84006.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 2_1_46FAA] Length = 248 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 149/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAMSDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + Sbjct: 64 GGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I+++ DKL++ L GI+DM PD +FVVD +E++ +QEA L I Sbjct: 122 EDGTFDVLPKKEVIEIKKEWDKLEKNLGGIKDMKKAPDAIFVVDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 182 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVAKMADAVIE 223 >gi|237747785|ref|ZP_04578265.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes OXCC13] gi|229379147|gb|EEO29238.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes OXCC13] Length = 246 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 148/222 (66%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M A+ I A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLAMYNDAMNYIRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA D + A+R+ V+ +WLGGM+TN+KT+ SI++L+D+E + Sbjct: 64 GTILMVGTKRQARDIIAAEAQRAGMPFVDQRWLGGMLTNFKTIKTSIKRLKDMEAAIEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + +KKE L R+ +KL++++ GI+DM GLPD +FVVD K AI EA +L IP++ Sbjct: 124 SVEKMSKKEGLMFSREVEKLQKSIGGIKDMNGLPDAIFVVDVGYHKGAITEAAKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ + YVIPGNDDSS++I L+ VA A ++G A Sbjct: 184 GVVDTNHSPEGLAYVIPGNDDSSKAIQLYARGVADAILEGRA 225 >gi|163839285|ref|YP_001623690.1| 30S ribosomal protein S2 [Renibacterium salmoninarum ATCC 33209] gi|189045002|sp|A9WL07|RS2_RENSM RecName: Full=30S ribosomal protein S2 gi|162952761|gb|ABY22276.1| SSU ribosomal protein S2P [Renibacterium salmoninarum ATCC 33209] Length = 294 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 114/244 (46%), Positives = 167/244 (68%), Gaps = 5/244 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLNSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E + R Q VN +WLGGM+TN++TV++ IQ++++LEE Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQSTRVGQPYVNHRWLGGMLTNFQTVAKRIQRMKELEE- 119 Query: 123 LNKEN---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +N E+ G TKKE L ++R+ KL+ L GIR++ +P +++VDT +E LAI EA++ Sbjct: 120 INFEDVASSGHTKKELLLLKRELTKLEGNLGGIRNLNKVPSTIWIVDTKKEHLAIDEAKK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK 238 L IP+VA++DTN +PD VD+ IPGNDD+ RS+ L ++A A +G IAR G+ Sbjct: 180 LNIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVIADAVAEGLIARNAKATGSAEG 239 Query: 239 SAGE 242 +A E Sbjct: 240 TAAE 243 >gi|165918978|ref|ZP_02219064.1| ribosomal protein S2 [Coxiella burnetii RSA 334] gi|165917303|gb|EDR35907.1| ribosomal protein S2 [Coxiella burnetii RSA 334] Length = 313 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 153/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + ++ Sbjct: 4 ITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKVASK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE L Sbjct: 64 RGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLEN 123 Query: 126 ENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL I Sbjct: 124 EENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEYERNAVQEANRLGIT 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID Sbjct: 184 VLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDA 225 >gi|260580002|ref|ZP_05847832.1| ribosomal protein S2 [Haemophilus influenzae RdAW] gi|260581739|ref|ZP_05849536.1| ribosomal protein S2 [Haemophilus influenzae NT127] gi|329122927|ref|ZP_08251498.1| 30S ribosomal protein S2 [Haemophilus aegyptius ATCC 11116] gi|1573934|gb|AAC22571.1| ribosomal protein S2 (rpS2) [Haemophilus influenzae Rd KW20] gi|68057698|gb|AAX87951.1| 30S ribosomal protein S2 [Haemophilus influenzae 86-028NP] gi|260093286|gb|EEW77219.1| ribosomal protein S2 [Haemophilus influenzae RdAW] gi|260095332|gb|EEW79223.1| ribosomal protein S2 [Haemophilus influenzae NT127] gi|327471858|gb|EGF17298.1| 30S ribosomal protein S2 [Haemophilus aegyptius ATCC 11116] Length = 251 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 12 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 72 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 132 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G Sbjct: 192 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 235 >gi|160903279|ref|YP_001568860.1| ribosomal protein S2 [Petrotoga mobilis SJ95] gi|189044948|sp|A9BGV6|RS2_PETMO RecName: Full=30S ribosomal protein S2 gi|160360923|gb|ABX32537.1| ribosomal protein S2 [Petrotoga mobilis SJ95] Length = 288 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+G FGHR WNPKM+ YIF R HIIDL +T+ + +A + ++V Sbjct: 5 SMKQLLEAGAHFGHRTRRWNPKMQPYIFTARKGIHIIDLQKTLKSIDEAYDFLKNSVMEK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R+LFV TK QA V + A+R ++ VN++WLGG++TN+KT+ I KL L E + E Sbjct: 65 KRVLFVGTKKQAQQIVADEARRCGEFFVNNRWLGGLLTNFKTIKSRIDKLEQLTEYVESE 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 KKE+ I R +KL++ L G+R M +PD++F++D +E++A++EA L+IPI+ Sbjct: 125 EFSKLPKKEQATIRRNLEKLEKNLGGLRGMKKIPDILFIIDPKKEEIAVKEANLLKIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A VDTN +PD++DYVIP NDD+ R+I L +A A I+G Sbjct: 185 ATVDTNCDPDVIDYVIPANDDAIRTIMLIVSKMADAIIEG 224 >gi|237739389|ref|ZP_04569870.1| SSU ribosomal protein S2P [Fusobacterium sp. 2_1_31] gi|229422997|gb|EEO38044.1| SSU ribosomal protein S2P [Fusobacterium sp. 2_1_31] Length = 247 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 151/221 (68%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN H+IDL +++ +++A + + G Sbjct: 5 SMKQLLEAGVHFGHQAKRWNPKMKKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G++LFV TK QA + + E A+RS Y +N++WLGGM+TN+ T+ + I+++++LE + Sbjct: 65 GKVLFVGTKKQAQEAIKEQAERSGMYYINNRWLGGMLTNFSTIKKRIERMKELERMDADG 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L IP+ Sbjct: 125 TLDSDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVREAHLLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 185 FAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEG 225 >gi|332686707|ref|YP_004456481.1| 30S ribosomal protein S2p (SAe) [Melissococcus plutonius ATCC 35311] gi|332370716|dbj|BAK21672.1| SSU ribosomal protein S2p (SAe) [Melissococcus plutonius ATCC 35311] Length = 265 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 152/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + + Sbjct: 64 GGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKQINTM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + ++R++L++ L GI DM +PD+M+VVD +E++A+QEA++L I Sbjct: 122 EDGTFDVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAVQEAQKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLLTAKMADAFIEG 224 >gi|319649534|ref|ZP_08003690.1| 30S ribosomal protein S2 [Bacillus sp. 2_A_57_CT2] gi|317398696|gb|EFV79378.1| 30S ribosomal protein S2 [Bacillus sp. 2_A_57_CT2] Length = 233 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 152/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D V E A RS + VN +WLGG +TN++T+ + I +L+D+E + Sbjct: 64 GGTILFVGTKKQAQDSVKEEAIRSGMFYVNQRWLGGTLTNFETIQKRIARLKDIERM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + +++++++L++ L GI+DM LPD +F++D +E++A+ EA +L I Sbjct: 122 EDGTFEVLPKKEVVQLKKEQERLEKFLGGIKDMKSLPDALFIIDPRKERIAVAEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEA 224 >gi|315038585|ref|YP_004032153.1| 30S ribosomal protein S2 [Lactobacillus amylovorus GRL 1112] gi|325957060|ref|YP_004292472.1| 30S ribosomal protein S2 [Lactobacillus acidophilus 30SC] gi|312276718|gb|ADQ59358.1| 30S ribosomal protein S2 [Lactobacillus amylovorus GRL 1112] gi|325333625|gb|ADZ07533.1| 30S ribosomal protein S2 [Lactobacillus acidophilus 30SC] gi|327183782|gb|AEA32229.1| 30S ribosomal protein S2 [Lactobacillus amylovorus GRL 1118] Length = 257 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + G Sbjct: 6 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAQDG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 66 GVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVRRLKQLKEM--SQ 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL++ L GI DM +PD++FVVD +EK+A+ EA L IP Sbjct: 124 DGTFDVLPKKEVALLTKEMDKLEKFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Sbjct: 184 VVAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIVEG 225 >gi|222151089|ref|YP_002560243.1| 30S ribosomal protein S2 [Macrococcus caseolyticus JCSC5402] gi|254764482|sp|B9EBD6|RS2_MACCJ RecName: Full=30S ribosomal protein S2 gi|222120212|dbj|BAH17547.1| 30S ribosomal protein S2 [Macrococcus caseolyticus JCSC5402] Length = 255 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSISEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA + + E A+R+ Q+ +N +WLGG +TN+KT+S+ ++++ ++E++ + Sbjct: 64 GGTVLFVGTKKQAQEAIKEEAERAGQFFINERWLGGTLTNYKTISKRVKRISEIEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ D+ + L GIR+M +P +FVVD +E+ AI EA++L + Sbjct: 122 EDGTFDVLPKKEVVELKKEYDRWVKFLGGIREMKSMPSALFVVDPRKERNAIAEAKKLHV 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 182 PIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG 224 >gi|328950714|ref|YP_004368049.1| ribosomal protein S2 [Marinithermus hydrothermalis DSM 14884] gi|328451038|gb|AEB11939.1| ribosomal protein S2 [Marinithermus hydrothermalis DSM 14884] Length = 251 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 146/218 (66%), Gaps = 1/218 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I++LLE+GV FGH WNPKM++YI+ ERN IIDL +T+ ++K + D ARG Sbjct: 6 SIKELLEAGVHFGHETKRWNPKMKKYIYAERNGVFIIDLQKTLVEIEKTCNFVQDLAARG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL+V TK QA + + A R VN +WLGGM+TN+KT+S + +L +LE L E Sbjct: 66 GVILYVGTKKQAQEIIQLEADRVGMPYVNQRWLGGMLTNFKTISARVNRLEELEALFESE 125 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE++ ++ + D+LK+ L G R + LPD +FVVD +E +A++EAR+L IPIV Sbjct: 126 EIKERPKKEQVRLKHELDRLKKYLSGFRRLKRLPDALFVVDPTKELIAVREARKLGIPIV 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A+ DT+S+PDL+DY+IPGNDD+ RSI L + I Sbjct: 186 ALADTDSDPDLIDYIIPGNDDAIRSIQLITSRLTDVII 223 >gi|145634080|ref|ZP_01789791.1| 30S ribosomal protein S2 [Haemophilus influenzae PittAA] gi|145636956|ref|ZP_01792620.1| 30S ribosomal protein S2 [Haemophilus influenzae PittHH] gi|148826443|ref|YP_001291196.1| 30S ribosomal protein S2 [Haemophilus influenzae PittEE] gi|148828091|ref|YP_001292844.1| 30S ribosomal protein S2 [Haemophilus influenzae PittGG] gi|161350022|ref|NP_439073.2| 30S ribosomal protein S2 [Haemophilus influenzae Rd KW20] gi|161761272|ref|YP_248611.2| 30S ribosomal protein S2 [Haemophilus influenzae 86-028NP] gi|319775155|ref|YP_004137643.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae F3047] gi|319897600|ref|YP_004135797.1| 30S ribosomal subunit protein s2 [Haemophilus influenzae F3031] gi|12230940|sp|P44371|RS2_HAEIN RecName: Full=30S ribosomal protein S2 gi|166225276|sp|A5UDG2|RS2_HAEIE RecName: Full=30S ribosomal protein S2 gi|166225277|sp|A5UI55|RS2_HAEIG RecName: Full=30S ribosomal protein S2 gi|209573721|sp|Q4QLZ6|RS2_HAEI8 RecName: Full=30S ribosomal protein S2 gi|145268524|gb|EDK08517.1| 30S ribosomal protein S2 [Haemophilus influenzae PittAA] gi|145269814|gb|EDK09753.1| 30S ribosomal protein S2 [Haemophilus influenzae PittHH] gi|148716603|gb|ABQ98813.1| 30S ribosomal protein S2 [Haemophilus influenzae PittEE] gi|148719333|gb|ABR00461.1| 30S ribosomal protein S2 [Haemophilus influenzae PittGG] gi|301169631|emb|CBW29232.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae 10810] gi|309973591|gb|ADO96792.1| 30S ribosomal protein S2 [Haemophilus influenzae R2846] gi|317433106|emb|CBY81480.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae F3031] gi|317449746|emb|CBY85953.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae F3047] Length = 240 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 224 >gi|261337805|ref|ZP_05965689.1| ribosomal protein S2 [Bifidobacterium gallicum DSM 20093] gi|270277262|gb|EFA23116.1| ribosomal protein S2 [Bifidobacterium gallicum DSM 20093] Length = 333 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 111/242 (45%), Positives = 160/242 (66%), Gaps = 5/242 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L +G+QFGH+ WNPKM++YI RN HIIDL +++ M+ A I T Sbjct: 1 MAQITMSEMLNAGLQFGHQTRRWNPKMKQYIITSRNGIHIIDLFKSLDMIDVAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAKDAIASQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL+R L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLERQLGGIRNMTRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ + G TK+ Sbjct: 181 GIPVVAIVDTNTDPETVEYPIPANDDAIRGIELLTRLMADAVAEGLLERS---GKGTKAE 237 Query: 241 GE 242 G+ Sbjct: 238 GD 239 >gi|325579132|ref|ZP_08149088.1| 30S ribosomal protein S2 [Haemophilus parainfluenzae ATCC 33392] gi|325159367|gb|EGC71501.1| 30S ribosomal protein S2 [Haemophilus parainfluenzae ATCC 33392] Length = 251 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 12 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK A + V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 72 ASNNGKVLFVGTKRAAQEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 132 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G Sbjct: 192 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 235 >gi|256846524|ref|ZP_05551981.1| ribosomal protein S2 [Fusobacterium sp. 3_1_36A2] gi|294784113|ref|ZP_06749414.1| ribosomal protein S2 [Fusobacterium sp. 3_1_27] gi|256718293|gb|EEU31849.1| ribosomal protein S2 [Fusobacterium sp. 3_1_36A2] gi|294488183|gb|EFG35528.1| ribosomal protein S2 [Fusobacterium sp. 3_1_27] Length = 247 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 152/224 (67%), Gaps = 8/224 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + G Sbjct: 5 SMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + + E A+RS Y VN++WLGGM+TN+ T+ + I+++++LE + + Sbjct: 65 GKVLFVGTKKQAQEAIKEQAERSGMYYVNNRWLGGMLTNFSTIKKRIERMKELERM---D 121 Query: 127 NQG-----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 122 AEGILDTDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 182 IPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVMANAIVEG 225 >gi|327475255|gb|AEA77222.1| SSU ribosomal protein S2p [Bacillus sp. 15.4] Length = 236 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V E A+R+ Y +N +WLGG +TN++T+ + I +L+ +E++ + Sbjct: 64 GGKVLFVGTKKQAQESVKEEAERAGMYFINQRWLGGTLTNFETIQKRISRLKQIEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L + L GI+DM LPD +F++D +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMQELPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|327399658|ref|YP_004340527.1| 30S ribosomal protein S2 [Hippea maritima DSM 10411] gi|327182287|gb|AEA34468.1| ribosomal protein S2 [Hippea maritima DSM 10411] Length = 257 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 104/223 (46%), Positives = 154/223 (69%), Gaps = 1/223 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLE+GV FGH+ WNPKM+ +IF R + HIIDL +T+ KA + + D A+G Sbjct: 5 TMKELLEAGVHFGHQTKRWNPKMKPFIFAARKDIHIIDLQKTIVYFDKAYEFLEDVAAQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL-EELLNK 125 +LFV TK Q + + EAA+ VN KWLGG++TN+ T+ +S++KL+ L E + Sbjct: 65 KTVLFVCTKKQGKEEIKEAAQSCNMPYVNEKWLGGLLTNFATIQKSLEKLQRLEEMEESG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + +TKKE+ + ++++KL++ L+GIR M LPD + ++D RE+LA++EA +L IPIV Sbjct: 125 EIEAYTKKEQKILRKRKEKLQKYLNGIRQMNDLPDALLIIDVKREELAVKEANKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 A+VDTN +PD +DYVIPGNDD+ RSI L +A A +G AR Sbjct: 185 ALVDTNCDPDPIDYVIPGNDDAIRSIKLMSARLAEAIKNGQAR 227 >gi|308176746|ref|YP_003916152.1| 30S ribosomal protein S2 [Arthrobacter arilaitensis Re117] gi|307744209|emb|CBT75181.1| 30S ribosomal protein S2 [Arthrobacter arilaitensis Re117] Length = 274 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 112/243 (46%), Positives = 167/243 (68%), Gaps = 4/243 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R+LL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRELLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSFIDRAYEFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TVS+ +Q++++LEE Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQANRVGQPYVNQRWLGGMLTNFQTVSKRVQRMKELEE- 119 Query: 123 LNKEN---QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +N E+ G TKKE L ++R+ KL+ L GIR++ P +++VDT +E LAI EA++ Sbjct: 120 INFEDVAGSGHTKKELLLLKRELTKLQNNLGGIRNLTRTPSAIWIVDTKKEHLAIDEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++DTN +PD V Y IPGNDD+ RS+ L +VA A +G+ +++ ++ Sbjct: 180 LGIPVVAILDTNCDPDEVTYPIPGNDDAIRSVNLLTRVVADAVAEGLIAKNNKAAGKSEG 239 Query: 240 AGE 242 A E Sbjct: 240 AAE 242 >gi|203284048|ref|YP_002221788.1| 30S ribosomal protein S2 [Borrelia duttonii Ly] gi|238690560|sp|B5RLJ7|RS2_BORDL RecName: Full=30S ribosomal protein S2 gi|201083491|gb|ACH93082.1| 30S ribosomal protein S2 [Borrelia duttonii Ly] Length = 254 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSVIKN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEAKRSEMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE I R++ KL + L GI+DM LP +F++D RE++ I EAR+L IPI Sbjct: 124 GTFEMISKKEVSQINREKLKLAKNLTGIKDMEELPGAIFIIDPKREQIVINEARKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +AVVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 IAVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|160939764|ref|ZP_02087111.1| hypothetical protein CLOBOL_04655 [Clostridium bolteae ATCC BAA-613] gi|158437198|gb|EDP14963.1| hypothetical protein CLOBOL_04655 [Clostridium bolteae ATCC BAA-613] Length = 287 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 150/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A Sbjct: 41 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDIAAD 100 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 101 GGTILFVGTKKQAQEAIKAEAERCGMYFVNERWLGGMLTNFKTIQSRIDRLKEIETM--S 158 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ F KKE + ++++ DKL+R L GI+DM LPD +F+VD +E + +QEA L I Sbjct: 159 QDGTFDVLPKKEVIALKKEWDKLERNLGGIKDMKRLPDAIFIVDPKKEHICVQEAHTLGI 218 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 219 PLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 261 >gi|238916783|ref|YP_002930300.1| small subunit ribosomal protein S2 [Eubacterium eligens ATCC 27750] gi|238872143|gb|ACR71853.1| small subunit ribosomal protein S2 [Eubacterium eligens ATCC 27750] Length = 237 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 100/220 (45%), Positives = 150/220 (68%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V + +A + ISD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIHIIDLQKSVGKVDEAYKAISDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + +E+ Sbjct: 61 TILFVGTKKQAQDAIATEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIETM--QED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE +N++++ +KL++ L GI++M LPD +F+VD +E++ +QEA L I + Sbjct: 119 GTFDVLPKKEVINLKKELEKLQKNLGGIKEMKRLPDAIFIVDPKKERICVQEAHALGIKL 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + + DTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 179 IGIADTNCDPDELDYVIPGNDDAIRAVKLIVAKMADAVIE 218 >gi|313679987|ref|YP_004057726.1| SSU ribosomal protein s2p [Oceanithermus profundus DSM 14977] gi|313152702|gb|ADR36553.1| SSU ribosomal protein S2P [Oceanithermus profundus DSM 14977] Length = 255 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I++LLE+GV FGH WNPKM+R+I+ ERN IIDL +T+ +Q A + D AR Sbjct: 5 ISIKELLEAGVHFGHETKRWNPKMKRFIYAERNGIFIIDLQKTLVQMQAACGYVEDLAAR 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG IL+V TK QA + V A R VN +WLGGM+TN+KT+S +++L +LE+L + Sbjct: 65 GGVILYVGTKKQAQEIVQIEADRVGMPYVNQRWLGGMLTNFKTISARVKRLEELEQLFDS 124 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E+ KKE++ ++ + D+L++ L G R + LPD ++VVD +E +A+ EAR+L IPI Sbjct: 125 EDINERPKKEQVRLQHELDRLRKYLGGFRRLSRLPDALYVVDPTKEAIAVAEARKLGIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+ DT+S+PDL+D++IPGNDD+ RSI L + I+ Sbjct: 185 VALADTDSDPDLIDHIIPGNDDAIRSIQLVTSRLTDVVIEA 225 >gi|261407950|ref|YP_003244191.1| 30S ribosomal protein S2 [Paenibacillus sp. Y412MC10] gi|329929325|ref|ZP_08283078.1| ribosomal protein S2 [Paenibacillus sp. HGF5] gi|261284413|gb|ACX66384.1| ribosomal protein S2 [Paenibacillus sp. Y412MC10] gi|328936694|gb|EGG33137.1| ribosomal protein S2 [Paenibacillus sp. HGF5] Length = 232 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 97/219 (44%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+++IF ERN +IIDL +TV +++A + Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMDKFIFTERNGIYIIDLQKTVKKVEEAFNFVKSVAGEN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D V E A+R + +N +WLGG +TN++T+ + I +L+ LE Sbjct: 65 GTILFVGTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFETIQKRINRLKQLETWEEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q KKE + + +++D+L++ L GI++M GLP +FV+D +E++A+ EAR+L IPIV Sbjct: 125 TFQVLPKKEVILLRKEKDRLEKFLGGIKNMKGLPSALFVIDPRKERIAVAEARKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ Sbjct: 185 GIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVE 223 >gi|307245427|ref|ZP_07527515.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254381|ref|ZP_07536219.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258840|ref|ZP_07540572.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853768|gb|EFM85985.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862680|gb|EFM94636.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867191|gb|EFM99047.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 238 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D ++A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAASAAVKEG 224 >gi|295093358|emb|CBK82449.1| SSU ribosomal protein S2P [Coprococcus sp. ART55/1] Length = 244 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 148/223 (66%), Gaps = 7/223 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YI+ ERN +IIDL ++V M+ A I D VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPYIYTERNGIYIIDLQKSVGMVDDAYNAIGDCVAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I L+ EE+ Sbjct: 64 GGTILFVGTKKQAQDSIKSEAERCGMYYVNERWLGGMLTNFKTIQTRIATLKKYEEM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + I+++ +KL++ L GI++M +PD++FVVD +E++ IQEA+ L Sbjct: 121 EQDGTFDVLPKKEVIQIKKEMEKLEKNLGGIKNMKRIPDMIFVVDPKKERICIQEAQSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I +V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IKLVGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 223 >gi|256371429|ref|YP_003109253.1| ribosomal protein S2 [Acidimicrobium ferrooxidans DSM 10331] gi|256008013|gb|ACU53580.1| ribosomal protein S2 [Acidimicrobium ferrooxidans DSM 10331] Length = 237 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 104/229 (45%), Positives = 153/229 (66%), Gaps = 1/229 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P T+ QLLE+GV FGH+ WNPKM +I+ R H+IDL T+ + ++ + + D Sbjct: 5 PLVTMSQLLEAGVHFGHQTRRWNPKMREHIYERRGGIHLIDLRHTLEGIDRSFRFVRDLS 64 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV TK QA D V + A+ + V+ +WLGGM+TN+ T+S+ + K+ + E + Sbjct: 65 ARGGTILFVGTKKQAQDAVSQYARLAGVPYVSHRWLGGMLTNFGTISRRVAKMAEYERMR 124 Query: 124 NKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ + + KKE L + R+ KL+ L GIR++ LPD +FV+DT +E +A+ EA RL I Sbjct: 125 DQGDFEAMPKKEALLLSRELAKLELNLGGIRNLTRLPDAIFVIDTPKEHIAVTEANRLGI 184 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 P+VAVVDTN++PDLV Y +PGNDD+ R+ LF L+A+A I+G RQ + Sbjct: 185 PVVAVVDTNADPDLVTYPMPGNDDAIRACELFTRLMATAVIEGRQRQQA 233 >gi|322514202|ref|ZP_08067264.1| 30S ribosomal protein S2 [Actinobacillus ureae ATCC 25976] gi|322119895|gb|EFX91904.1| 30S ribosomal protein S2 [Actinobacillus ureae ATCC 25976] Length = 238 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAGLTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D ++A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAASAAVKEG 224 >gi|237745595|ref|ZP_04576075.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes HOxBLS] gi|229376946|gb|EEO27037.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes HOxBLS] Length = 245 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 109/253 (43%), Positives = 159/253 (62%), Gaps = 12/253 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M A+ I A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLAMYNDAMNYIRQLSANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA D + A+R+ V+ +WLGGM+TN+KT+ SI++L+D+E + Sbjct: 64 GTILMVGTKRQARDIIASEAQRAGMPYVDQRWLGGMLTNFKTIRTSIKRLKDMEAAIEDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE L +R+ KL++A+ GI+DM GLPD +FVVD K A+ EA++L IP++ Sbjct: 124 TVDKMSKKEGLMFQREVAKLQKAIGGIKDMNGLPDAIFVVDVGYHKGAVTEAQKLGIPVI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 VVDTN +P+ + YVIPGNDDSS++I L+ VA A ++G A SA + V+ Sbjct: 184 GVVDTNHSPEGLAYVIPGNDDSSKAIQLYARGVADAILEGRA-----------SAMQDVL 232 Query: 246 HSKEGMQLEEDSQ 258 + +G EE +Q Sbjct: 233 ETVKGESGEEAAQ 245 >gi|225848032|ref|YP_002728195.1| 30S ribosomal protein S2 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644482|gb|ACN99532.1| ribosomal protein S2 [Sulfurihydrogenibium azorense Az-Fu1] Length = 288 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 158/225 (70%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++R+LLE+GV FGH+ WNPKM+ YI+ +RN HIIDLS++VP+ ++A+ I + VA Sbjct: 4 EISMRELLEAGVHFGHQVRRWNPKMKPYIYTKRNGIHIIDLSKSVPLFKQAIDFIINEVA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILF+ TK QA + E A+R Y VN +WLGGM TN++TV +SI KLR L+++ Sbjct: 64 NGAEILFLGTKKQAQAIIEEQAQRCGAYYVNYRWLGGMFTNFQTVRKSIAKLRKLQKM-- 121 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G KKE + ++++++KL++ L GI DM +PD++FVVDT RE LA+ EA +L Sbjct: 122 -EAEGAFEILPKKEVMKLKKQKEKLEKYLKGIVDMNRVPDIIFVVDTVREDLAVTEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VA+ DTN +PD +DY IPGNDD+ ++I+L +A A I+G Sbjct: 181 GVTVVAIADTNCDPDKIDYPIPGNDDAIKAISLITSKIADAVIEG 225 >gi|212218984|ref|YP_002305771.1| 30S ribosomal protein S2 [Coxiella burnetii CbuK_Q154] gi|212013246|gb|ACJ20626.1| SSU ribosomal protein S2P [Coxiella burnetii CbuK_Q154] Length = 359 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 153/222 (68%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + ++ Sbjct: 50 ITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKVASK 109 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE L Sbjct: 110 RGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLEN 169 Query: 126 ENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL I Sbjct: 170 EENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGIT 229 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID Sbjct: 230 VLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDA 271 >gi|227878829|ref|ZP_03996736.1| ribosomal protein S2 [Lactobacillus crispatus JV-V01] gi|256843351|ref|ZP_05548839.1| 30S ribosomal protein S2 [Lactobacillus crispatus 125-2-CHN] gi|256849830|ref|ZP_05555261.1| ribosomal protein S2 [Lactobacillus crispatus MV-1A-US] gi|262046924|ref|ZP_06019884.1| 30S ribosomal protein S2 [Lactobacillus crispatus MV-3A-US] gi|293381204|ref|ZP_06627212.1| 30S ribosomal protein S2 [Lactobacillus crispatus 214-1] gi|295693147|ref|YP_003601757.1| 30S ribosomal protein s2 [Lactobacillus crispatus ST1] gi|227861577|gb|EEJ69189.1| ribosomal protein S2 [Lactobacillus crispatus JV-V01] gi|256614771|gb|EEU19972.1| 30S ribosomal protein S2 [Lactobacillus crispatus 125-2-CHN] gi|256713319|gb|EEU28309.1| ribosomal protein S2 [Lactobacillus crispatus MV-1A-US] gi|260572906|gb|EEX29466.1| 30S ribosomal protein S2 [Lactobacillus crispatus MV-3A-US] gi|290922244|gb|EFD99238.1| 30S ribosomal protein S2 [Lactobacillus crispatus 214-1] gi|295031253|emb|CBL50732.1| 30S ribosomal protein S2 [Lactobacillus crispatus ST1] Length = 257 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 145/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + G Sbjct: 6 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAQDG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ I++L+ L+++ E Sbjct: 66 GVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWSTMQSRIKRLKQLKQM--SE 123 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL++ GI DM +PD++FVVD +EK+A+ EA L IP Sbjct: 124 DGTFDVLPKKEVALLTKEMDKLEKFFGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Sbjct: 184 VVAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAVVEG 225 >gi|294786950|ref|ZP_06752204.1| ribosomal protein S2 [Parascardovia denticolens F0305] gi|315226587|ref|ZP_07868375.1| 30S ribosomal protein S2 [Parascardovia denticolens DSM 10105] gi|294485783|gb|EFG33417.1| ribosomal protein S2 [Parascardovia denticolens F0305] gi|315120719|gb|EFT83851.1| 30S ribosomal protein S2 [Parascardovia denticolens DSM 10105] Length = 278 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 109/239 (45%), Positives = 157/239 (65%), Gaps = 2/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ Q+L +GV FGH+ WNPKM++YI ERN HIIDL +++ ++ +A I DT Sbjct: 1 MAQITMSQMLNAGVHFGHQTSRWNPKMKQYILMERNGIHIIDLFKSMDLIDQAYTFIKDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + ++++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQETITAQATRVGMPYVSERWLGGMLTNFQTVSKRVARMKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVHSSNLTKKELLLLEREKDKLVKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA+VDTN +PD VDY IP NDD+ R + L L+A A +G+ + TKS Sbjct: 181 GIPVVALVDTNCDPDSVDYAIPANDDAIRGVELLTSLMADAVAEGLLARSDKAAKATKS 239 >gi|162451403|ref|YP_001613771.1| hypothetical protein sce3132 [Sorangium cellulosum 'So ce 56'] gi|209573680|sp|A9GIN6|RS2_SORC5 RecName: Full=30S ribosomal protein S2 gi|161161985|emb|CAN93290.1| rpsB [Sorangium cellulosum 'So ce 56'] Length = 278 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 107/228 (46%), Positives = 158/228 (69%), Gaps = 5/228 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++GV FGH+ WNPKM +I+ RN HIIDL QT + ++A ++D V RGG Sbjct: 15 LRSLLDAGVHFGHQTKRWNPKMRPFIYGARNGIHIIDLDQTTRLFKRAYDFLTDAVGRGG 74 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LFV TK QA D V E A+R+ Y V ++WLGG +TN++T+ Q + +LR LE + KE+ Sbjct: 75 HVLFVGTKRQAQDIVQEEARRAGMYFVTNRWLGGTLTNFRTIKQGLDRLRTLERM--KED 132 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + +E++R++L++ L G++ MGGLP +FV+D ++E +AI EAR+L +P+ Sbjct: 133 GTYEQLLKKEVVRLEKERERLEKYLGGLKGMGGLPAAIFVIDPHQESIAISEARKLNVPV 192 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 VA+ DTN +PDLVD+VIPGNDD+ RSI L VA A ++G R+ + Sbjct: 193 VAITDTNCDPDLVDFVIPGNDDAIRSIRLITARVADACVEGAQRRKDH 240 >gi|147677587|ref|YP_001211802.1| 30S ribosomal protein S2 [Pelotomaculum thermopropionicum SI] gi|189044947|sp|A5D2T5|RS2_PELTS RecName: Full=30S ribosomal protein S2 gi|146273684|dbj|BAF59433.1| ribosomal protein S2 [Pelotomaculum thermopropionicum SI] Length = 232 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++A I A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEEAYNFIKQLAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +LFV TK QA + V E A+R + VN +WLGGM+TN++T+ + I +L++LE++ N Sbjct: 64 GETVLFVGTKKQAQEAVQEEAERCGMFYVNQRWLGGMLTNFQTIRRRIDRLQELEKMEEN 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + +++KL++ L GI++M LP +FV+D +E++A+ EAR+L IPI Sbjct: 124 GSLEVLPKKEVAELMHEKEKLQKFLGGIKEMRRLPGALFVIDPRKERIAVAEARKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN +PD VDYVIPGNDD+ R++ L +A A ++G Sbjct: 184 VAIVDTNCDPDEVDYVIPGNDDAIRAVRLLTAKMADAVLEG 224 >gi|223041501|ref|ZP_03611704.1| 30S ribosomal protein S2 [Actinobacillus minor 202] gi|223017759|gb|EEF16166.1| 30S ribosomal protein S2 [Actinobacillus minor 202] Length = 236 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK ASD V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKVLFVGTKRAASDAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D V +A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSVVAAIKEG 224 >gi|312898659|ref|ZP_07758049.1| ribosomal protein S2 [Megasphaera micronuciformis F0359] gi|310620578|gb|EFQ04148.1| ribosomal protein S2 [Megasphaera micronuciformis F0359] Length = 284 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 102/236 (43%), Positives = 157/236 (66%), Gaps = 7/236 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV L +A D + G Sbjct: 17 SMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKLDEAYNFARDLASEG 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + + A+R + VN +WLGGM+TN++T+ + +++L+ LE+ E Sbjct: 77 GKVLFVGTKKQAQESIKNEAERCGMFFVNERWLGGMLTNFQTIEKRVKRLKTLEK--QAE 134 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE ++ + +KL++ L GI++M +PD +FV+D +E++AI EAR+L IP Sbjct: 135 DGTFDVLPKKEVTLLKHEMEKLQKYLGGIKEMKKVPDALFVIDPKKEEIAIAEARKLNIP 194 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 I+A VDTN +PDL+DY IP NDD+ R++ L +A A ++G RQ M + ++ Sbjct: 195 IIATVDTNCDPDLIDYPIPANDDAIRAVKLLTGKIADAIMEG--RQGESMDGEEQT 248 >gi|125625188|ref|YP_001033671.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris MG1363] gi|281492807|ref|YP_003354787.1| 50S ribosomal protein S2P [Lactococcus lactis subsp. lactis KF147] gi|166225280|sp|A2RNV0|RS2_LACLM RecName: Full=30S ribosomal protein S2 gi|124493996|emb|CAL98994.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris MG1363] gi|281376459|gb|ADA65945.1| SSU ribosomal protein S2P [Lactococcus lactis subsp. lactis KF147] gi|300071997|gb|ADJ61397.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris NZ9000] gi|326407730|gb|ADZ64801.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. lactis CV56] Length = 255 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN H+IDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIHVIDLQKTVKLVDDAYNYVKNASQE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA++ V E A R+ QY VN +WLGGM+TNW T+ + +L+++ ++ Sbjct: 64 GAVVLFVGTKKQAAEAVKEEALRAGQYYVNHRWLGGMLTNWNTIQTRVTRLKEINKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + + ++R++L++ + GI DM +PD+M++VD + E++A++EA+ L Sbjct: 121 EEEGTFEVLPKKEVVLLNKERERLEKFIGGIADMPRIPDVMYIVDPHAEQIAVKEAKTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++P+ +D VIP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPEPIDVVIPANDDAIRAVKLITAKMADAIIEG 224 >gi|325661862|ref|ZP_08150483.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 4_1_37FAA] gi|331085661|ref|ZP_08334744.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471840|gb|EGC75057.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406584|gb|EGG86089.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 250 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 149/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ISD A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAISDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + Sbjct: 64 GGTILFVGTKKQAQDAIKSEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERM--A 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + I+++ +KL++ L GI+DM PD +F+VD +E++ +QEA L I Sbjct: 122 EDGTFDVLPKKEVIAIKKEWEKLEKNLGGIKDMKKAPDAIFIVDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 182 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVAKMADAVIE 223 >gi|157736793|ref|YP_001489476.1| 30S ribosomal protein S2 [Arcobacter butzleri RM4018] gi|315635973|ref|ZP_07891234.1| 30S ribosomal protein S2 [Arcobacter butzleri JV22] gi|167011232|sp|A8ES83|RS2_ARCB4 RecName: Full=30S ribosomal protein S2 gi|157698647|gb|ABV66807.1| 30S ribosomal protein S2 [Arcobacter butzleri RM4018] gi|315479757|gb|EFU70429.1| 30S ribosomal protein S2 [Arcobacter butzleri JV22] Length = 265 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 116/271 (42%), Positives = 167/271 (61%), Gaps = 14/271 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM+++IF R N +IIDL +T+ + V+ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIYIIDLQKTLRYFRYTYNVVRDRAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++FV TK QAS+ + +AA VN +WLGGM+TN+ T+ +SI+KL ++++ +E Sbjct: 63 QTMIFVGTKKQASETIKKAAISCGMPYVNHRWLGGMLTNFGTIKKSIRKLEIIKKM-REE 121 Query: 127 NQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 Q TKKE L + RK +KL+ L GI++M LPD+MFV+D +EK+AIQEARRL I + Sbjct: 122 GQLDLLTKKEALMLTRKEEKLELYLGGIKEMNKLPDMMFVLDAVKEKIAIQEARRLGITV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VD IPGNDD+ RSI LFC+ +A+A +G A G + Sbjct: 182 VAPLDTNCDPDVVDLPIPGNDDAIRSIHLFCNEMAAAMNEGKAALADETGVEV------- 234 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E + EE + +V +G+E E Sbjct: 235 ----EPISAEEKEELIAEAVAEGEEFNFAEE 261 >gi|262066281|ref|ZP_06025893.1| ribosomal protein S2 [Fusobacterium periodonticum ATCC 33693] gi|294783618|ref|ZP_06748942.1| ribosomal protein S2 [Fusobacterium sp. 1_1_41FAA] gi|291379976|gb|EFE87494.1| ribosomal protein S2 [Fusobacterium periodonticum ATCC 33693] gi|294480496|gb|EFG28273.1| ribosomal protein S2 [Fusobacterium sp. 1_1_41FAA] Length = 247 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 150/221 (67%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN H+IDL +++ +++A + + G Sbjct: 5 SMKQLLEAGVHFGHQAKRWNPKMKKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G++LFV TK QA + + E A+RS Y +N++WLGGM+TN+ T+ + I+++++LE + Sbjct: 65 GKVLFVGTKKQAQEAIKEQAERSGMYYINNRWLGGMLTNFSTIKKRIERMKELERMDADG 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +TKKE ++ KL + L GIRDM PD ++VVD E+L ++EA L IP+ Sbjct: 125 TLDSDYTKKEAAEFRKELSKLSKNLSGIRDMEKAPDAIYVVDVKMEELPVREAHLLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 185 FAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEG 225 >gi|269797917|ref|YP_003311817.1| ribosomal protein S2 [Veillonella parvula DSM 2008] gi|269094546|gb|ACZ24537.1| ribosomal protein S2 [Veillonella parvula DSM 2008] Length = 281 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + ++G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREVASQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + E Sbjct: 65 EVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + DKL++ L GI+DM +P +FVVD +EK+AI EA++L IP Sbjct: 123 DGTFEVLPKKEVIGLRHEMDKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA VDTN +PD VD+ IP NDD+ R++ L +A A ++G Sbjct: 183 VVATVDTNCDPDEVDFPIPANDDAIRAVKLLAGKMADAVLEG 224 >gi|258591442|emb|CBE67743.1| 30S ribosomal protein S2 [NC10 bacterium 'Dutch sediment'] Length = 262 Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 100/214 (46%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI++LLE+G+ FGH+ WNPKM++++F E+N +IIDL +T+ +A+ + D +G Sbjct: 5 TIKELLEAGIHFGHQTKRWNPKMKKFLFGEQNGIYIIDLQKTLKKFHEAIAFVRDVAEQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 ++FV TK QA+D + + A R Q+ VN +WLGG +TN++T+ +S+ +LR +EE+ K Sbjct: 65 LPVVFVGTKKQAADVMEQEANRCEQFFVNHRWLGGTLTNFQTIRKSVGRLRHIEEMEAKG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + TKKE ++R+R KL+ L GI+ M LP +FV+DT +E++A+ EARRL IP+V Sbjct: 125 ECERLTKKEIAGLQRERQKLEYTLGGIKGMERLPGAIFVIDTKKERIAVCEARRLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 AVVDTN +PD VDY IPGNDD+ R+I L +A Sbjct: 185 AVVDTNCDPDEVDYPIPGNDDAIRAIRLMAGRMA 218 >gi|297588381|ref|ZP_06947024.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 53516] gi|297573754|gb|EFH92475.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 53516] Length = 270 Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV + A + D VA G Sbjct: 5 SMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKQIDDAYNYVRDIVADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + AKR Q+ V+ +WLGGM+TN+KT+ I +L L E+ +E Sbjct: 65 GEVLFVGTKKQAQEAIETEAKRCGQHYVSQRWLGGMLTNYKTIKTRINRLHQLYEM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE +ER+R+KL++ L GIR M +P ++FVVD +E +A+ EA+ L IP Sbjct: 123 DGTFDLLPKKEVSQLEREREKLEKNLGGIRKMTKMPSVLFVVDPKKEYIAVHEAKILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V +VDTN +PD +D IPGNDD+ R++ L +A A I+ Sbjct: 183 VVGIVDTNCDPDELDIAIPGNDDAIRAVKLLTSTIADAVIEA 224 >gi|153810141|ref|ZP_01962809.1| hypothetical protein RUMOBE_00522 [Ruminococcus obeum ATCC 29174] gi|149833320|gb|EDM88401.1| hypothetical protein RUMOBE_00522 [Ruminococcus obeum ATCC 29174] Length = 256 Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D VA Sbjct: 18 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADIVAN 77 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG ILFV TK QA D + A+R Q+ VN +WLGGM+TN+KT+ I +L+ +E + + Sbjct: 78 GGNILFVGTKKQAQDAIKAEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKQIEAMEAD 137 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + + ++ KL++ L GI++M LPD +F+VD +E++ +QEA L IP+ Sbjct: 138 GTFEVLPKKEVIELRKELAKLQKNLGGIKEMKRLPDAIFIVDPKKERICVQEAHTLGIPL 197 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 198 IGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 237 >gi|295108498|emb|CBL22451.1| SSU ribosomal protein S2P [Ruminococcus obeum A2-162] Length = 242 Score = 214 bits (546), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADIVAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG ILFV TK QA D + A+R Q+ VN +WLGGM+TN+KT+ I +L+ +E + + Sbjct: 64 GGNILFVGTKKQAQDAIKAEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKQIEAMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + + ++ KL++ L GI++M LPD +F+VD +E++ +QEA L IP+ Sbjct: 124 GTFEVLPKKEVIELRKELAKLQKNLGGIKEMKRLPDAIFIVDPKKERICVQEAHTLGIPL 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 184 IGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 223 >gi|294102178|ref|YP_003554036.1| ribosomal protein S2 [Aminobacterium colombiense DSM 12261] gi|293617158|gb|ADE57312.1| ribosomal protein S2 [Aminobacterium colombiense DSM 12261] Length = 266 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 151/220 (68%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L+KA + + Sbjct: 5 SMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVRGLEKAYAFVREIAQNN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A+RS QY +N +WLGG++TN+ T+ + + ++ +L ++ ++ Sbjct: 65 GSLLFVGTKRQAQDTIREEAERSGQYFINQRWLGGLLTNFSTIRKRVTRMVELRKMAAED 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N KKE ++++ KL++ L GI M +PD +F++D RE++AI EA++L IP++ Sbjct: 125 NWSNLPKKEVALLKKELAKLEKYLSGIAGMKNVPDALFLIDPRREEIAILEAKKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTN +P+++DY IPGNDD+ R+I L L+A A I+G Sbjct: 185 AIVDTNCDPEMIDYPIPGNDDAIRAIKLISGLMADAMIEG 224 >gi|257467193|ref|ZP_05631504.1| 30S ribosomal protein S2 [Fusobacterium gonidiaformans ATCC 25563] gi|315918323|ref|ZP_07914563.1| SSU ribosomal protein S2P [Fusobacterium gonidiaformans ATCC 25563] gi|313692198|gb|EFS29033.1| SSU ribosomal protein S2P [Fusobacterium gonidiaformans ATCC 25563] Length = 247 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 107/257 (41%), Positives = 159/257 (61%), Gaps = 20/257 (7%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ ++ A + V Sbjct: 4 ITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIETAYDEMRKIVED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ I++L++LE + Sbjct: 64 GGKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKGRIERLKELERM--- 120 Query: 126 ENQG-----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G +TKKE ++ KL + L GI++M +P +FVVD E+LA+ EA L Sbjct: 121 EAEGILDTAYTKKEAATFRKELAKLSKNLTGIKEMKEVPQAIFVVDVKMEELAVTEADHL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD V + IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDKVTFPIPANDDAIRSVKLITSVMANAIVEG------------NQG 228 Query: 241 GETVVHSKEGMQLEEDS 257 ETV + E +Q+EE S Sbjct: 229 KETVEPASEEIQVEEGS 245 >gi|15674135|ref|NP_268310.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. lactis Il1403] gi|13878746|sp|Q9CDR4|RS2_LACLA RecName: Full=30S ribosomal protein S2 gi|12725213|gb|AAK06251.1|AE006444_2 30S ribosomal protein S2 [Lactococcus lactis subsp. lactis Il1403] Length = 255 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN H+IDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIHVIDLQKTVKLVDDAYNYVKNASQE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA++ V E A R+ QY VN +WLGGM+TNW T+ + +L+++ ++ Sbjct: 64 GAVVLFVGTKKQAAEAVKEEALRAGQYYVNHRWLGGMLTNWNTIQTRVTRLKEINKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + + ++R++L++ + GI DM +PD+M++VD + E++A++EA+ L Sbjct: 121 EEEGTFEVLPKKEVVLLNKERERLEKFIGGIADMPRIPDVMYIVDPHAEQIAVKEAKTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++P+ +D VIP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPEPIDVVIPANDDAIRAVKLITAKMADAIIEG 224 >gi|126208048|ref|YP_001053273.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae L20] gi|166225234|sp|A3MZT2|RS2_ACTP2 RecName: Full=30S ribosomal protein S2 gi|126096840|gb|ABN73668.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 238 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ + L+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELETLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D A+A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEG 224 >gi|29376895|ref|NP_816049.1| 30S ribosomal protein S2 [Enterococcus faecalis V583] gi|227519881|ref|ZP_03949930.1| 30S ribosomal protein S2 [Enterococcus faecalis TX0104] gi|227553932|ref|ZP_03983979.1| 30S ribosomal protein S2 [Enterococcus faecalis HH22] gi|229545179|ref|ZP_04433904.1| 30S ribosomal protein S2 [Enterococcus faecalis TX1322] gi|229549427|ref|ZP_04438152.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 29200] gi|255972131|ref|ZP_05422717.1| SSU ribosomal protein S2P [Enterococcus faecalis T1] gi|255975198|ref|ZP_05425784.1| 30S ribosomal protein S2 [Enterococcus faecalis T2] gi|256617044|ref|ZP_05473890.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 4200] gi|256763094|ref|ZP_05503674.1| SSU ribosomal protein S2P [Enterococcus faecalis T3] gi|256853761|ref|ZP_05559126.1| ribosomal protein S2 [Enterococcus faecalis T8] gi|256956678|ref|ZP_05560849.1| SSU ribosomal protein S2P [Enterococcus faecalis DS5] gi|256961305|ref|ZP_05565476.1| 30S ribosomal protein S2 [Enterococcus faecalis Merz96] gi|256963567|ref|ZP_05567738.1| 30S ribosomal protein S2 [Enterococcus faecalis HIP11704] gi|257079633|ref|ZP_05573994.1| 30S ribosomal protein S2P [Enterococcus faecalis JH1] gi|257084572|ref|ZP_05578933.1| 30S ribosomal protein S2 [Enterococcus faecalis Fly1] gi|257087432|ref|ZP_05581793.1| 30S ribosomal protein S2 [Enterococcus faecalis D6] gi|257416639|ref|ZP_05593633.1| SSU ribosomal protein S2P [Enterococcus faecalis AR01/DG] gi|257419855|ref|ZP_05596849.1| 30S ribosomal protein S2P [Enterococcus faecalis T11] gi|257421956|ref|ZP_05598946.1| 30S ribosomal protein S2 [Enterococcus faecalis X98] gi|293383590|ref|ZP_06629500.1| ribosomal protein S2 [Enterococcus faecalis R712] gi|293387297|ref|ZP_06631854.1| ribosomal protein S2 [Enterococcus faecalis S613] gi|294780913|ref|ZP_06746267.1| ribosomal protein S2 [Enterococcus faecalis PC1.1] gi|300860866|ref|ZP_07106953.1| ribosomal protein S2 [Enterococcus faecalis TUSoD Ef11] gi|307270844|ref|ZP_07552131.1| ribosomal protein S2 [Enterococcus faecalis TX4248] gi|307271506|ref|ZP_07552778.1| ribosomal protein S2 [Enterococcus faecalis TX0855] gi|307277166|ref|ZP_07558270.1| ribosomal protein S2 [Enterococcus faecalis TX2134] gi|307285817|ref|ZP_07565951.1| ribosomal protein S2 [Enterococcus faecalis TX0860] gi|307287720|ref|ZP_07567763.1| ribosomal protein S2 [Enterococcus faecalis TX0109] gi|307290548|ref|ZP_07570460.1| ribosomal protein S2 [Enterococcus faecalis TX0411] gi|312899830|ref|ZP_07759149.1| ribosomal protein S2 [Enterococcus faecalis TX0470] gi|312906140|ref|ZP_07765152.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 512] gi|312909485|ref|ZP_07768340.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 516] gi|312953480|ref|ZP_07772320.1| ribosomal protein S2 [Enterococcus faecalis TX0102] gi|38258304|sp|Q831U9|RS2_ENTFA RecName: Full=30S ribosomal protein S2 gi|29344360|gb|AAO82119.1| ribosomal protein S2 [Enterococcus faecalis V583] gi|227072675|gb|EEI10638.1| 30S ribosomal protein S2 [Enterococcus faecalis TX0104] gi|227176918|gb|EEI57890.1| 30S ribosomal protein S2 [Enterococcus faecalis HH22] gi|229305664|gb|EEN71660.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 29200] gi|229309724|gb|EEN75711.1| 30S ribosomal protein S2 [Enterococcus faecalis TX1322] gi|255963149|gb|EET95625.1| SSU ribosomal protein S2P [Enterococcus faecalis T1] gi|255968070|gb|EET98692.1| 30S ribosomal protein S2 [Enterococcus faecalis T2] gi|256596571|gb|EEU15747.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 4200] gi|256684345|gb|EEU24040.1| SSU ribosomal protein S2P [Enterococcus faecalis T3] gi|256710704|gb|EEU25747.1| ribosomal protein S2 [Enterococcus faecalis T8] gi|256947174|gb|EEU63806.1| SSU ribosomal protein S2P [Enterococcus faecalis DS5] gi|256951801|gb|EEU68433.1| 30S ribosomal protein S2 [Enterococcus faecalis Merz96] gi|256954063|gb|EEU70695.1| 30S ribosomal protein S2 [Enterococcus faecalis HIP11704] gi|256987663|gb|EEU74965.1| 30S ribosomal protein S2P [Enterococcus faecalis JH1] gi|256992602|gb|EEU79904.1| 30S ribosomal protein S2 [Enterococcus faecalis Fly1] gi|256995462|gb|EEU82764.1| 30S ribosomal protein S2 [Enterococcus faecalis D6] gi|257158467|gb|EEU88427.1| SSU ribosomal protein S2P [Enterococcus faecalis ARO1/DG] gi|257161683|gb|EEU91643.1| 30S ribosomal protein S2P [Enterococcus faecalis T11] gi|257163780|gb|EEU93740.1| 30S ribosomal protein S2 [Enterococcus faecalis X98] gi|291079102|gb|EFE16466.1| ribosomal protein S2 [Enterococcus faecalis R712] gi|291083334|gb|EFE20297.1| ribosomal protein S2 [Enterococcus faecalis S613] gi|294452039|gb|EFG20487.1| ribosomal protein S2 [Enterococcus faecalis PC1.1] gi|295113455|emb|CBL32092.1| ribosomal protein S2, bacterial type [Enterococcus sp. 7L76] gi|300849905|gb|EFK77655.1| ribosomal protein S2 [Enterococcus faecalis TUSoD Ef11] gi|306498403|gb|EFM67908.1| ribosomal protein S2 [Enterococcus faecalis TX0411] gi|306501458|gb|EFM70761.1| ribosomal protein S2 [Enterococcus faecalis TX0109] gi|306502578|gb|EFM71845.1| ribosomal protein S2 [Enterococcus faecalis TX0860] gi|306506096|gb|EFM75262.1| ribosomal protein S2 [Enterococcus faecalis TX2134] gi|306511778|gb|EFM80776.1| ribosomal protein S2 [Enterococcus faecalis TX0855] gi|306512757|gb|EFM81402.1| ribosomal protein S2 [Enterococcus faecalis TX4248] gi|310627786|gb|EFQ11069.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 512] gi|310628689|gb|EFQ11972.1| ribosomal protein S2 [Enterococcus faecalis TX0102] gi|311290158|gb|EFQ68714.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 516] gi|311293080|gb|EFQ71636.1| ribosomal protein S2 [Enterococcus faecalis TX0470] gi|315025413|gb|EFT37345.1| ribosomal protein S2 [Enterococcus faecalis TX2137] gi|315030222|gb|EFT42154.1| ribosomal protein S2 [Enterococcus faecalis TX4000] gi|315032892|gb|EFT44824.1| ribosomal protein S2 [Enterococcus faecalis TX0017] gi|315035623|gb|EFT47555.1| ribosomal protein S2 [Enterococcus faecalis TX0027] gi|315144759|gb|EFT88775.1| ribosomal protein S2 [Enterococcus faecalis TX2141] gi|315146676|gb|EFT90692.1| ribosomal protein S2 [Enterococcus faecalis TX4244] gi|315150160|gb|EFT94176.1| ribosomal protein S2 [Enterococcus faecalis TX0012] gi|315152147|gb|EFT96163.1| ribosomal protein S2 [Enterococcus faecalis TX0031] gi|315155334|gb|EFT99350.1| ribosomal protein S2 [Enterococcus faecalis TX0043] gi|315159090|gb|EFU03107.1| ribosomal protein S2 [Enterococcus faecalis TX0312] gi|315161683|gb|EFU05700.1| ribosomal protein S2 [Enterococcus faecalis TX0645] gi|315164819|gb|EFU08836.1| ribosomal protein S2 [Enterococcus faecalis TX1302] gi|315166406|gb|EFU10423.1| ribosomal protein S2 [Enterococcus faecalis TX1341] gi|315170303|gb|EFU14320.1| ribosomal protein S2 [Enterococcus faecalis TX1342] gi|315574367|gb|EFU86558.1| ribosomal protein S2 [Enterococcus faecalis TX0309B] gi|315580158|gb|EFU92349.1| ribosomal protein S2 [Enterococcus faecalis TX0309A] gi|323481390|gb|ADX80829.1| ribosomal protein S2 [Enterococcus faecalis 62] gi|327535686|gb|AEA94520.1| 30S ribosomal protein S2 [Enterococcus faecalis OG1RF] gi|329572244|gb|EGG53904.1| ribosomal protein S2 [Enterococcus faecalis TX1467] Length = 261 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 150/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + + Sbjct: 64 GGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L I Sbjct: 122 EDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 224 >gi|121604660|ref|YP_981989.1| 30S ribosomal protein S2 [Polaromonas naphthalenivorans CJ2] gi|166225293|sp|A1VN40|RS2_POLNA RecName: Full=30S ribosomal protein S2 gi|120593629|gb|ABM37068.1| SSU ribosomal protein S2P [Polaromonas naphthalenivorans CJ2] Length = 250 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/220 (45%), Positives = 149/220 (67%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ W+PKM YIF RN HII+L +++PM Q+A++ A G Sbjct: 5 MREMLEAGVHFGHQTRFWDPKMAPYIFGHRNRIHIINLEKSLPMFQEAMKFAKQLTANRG 64 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 IL V TK A + V A+R+ V+ +WLGGM+TN+KTV SI++L++++ Sbjct: 65 TILMVGTKRTARETVAAEAQRAGIPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAGL 124 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +KKE+L +R+ +KL++ + GI+DM LPD +FV+D K+AI EA++L IP++ V Sbjct: 125 DSISKKEQLTFKREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAILEAKKLGIPLIGV 184 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VDTN +P +DYVIPGNDDSS+++AL+ +A A I+G A Sbjct: 185 VDTNHSPLGIDYVIPGNDDSSKAVALYARGIADAVIEGRA 224 >gi|34762366|ref|ZP_00143368.1| SSU ribosomal protein S2P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741353|ref|ZP_04571834.1| SSU ribosomal protein S2P [Fusobacterium sp. 4_1_13] gi|27887948|gb|EAA25014.1| SSU ribosomal protein S2P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430885|gb|EEO41097.1| SSU ribosomal protein S2P [Fusobacterium sp. 4_1_13] Length = 247 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 152/224 (67%), Gaps = 8/224 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + G Sbjct: 5 SMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + + E A+R+ Y VN++WLGGM+TN+ T+ + I+++++LE + + Sbjct: 65 GKVLFVGTKKQAQEAIKEQAERAGMYYVNNRWLGGMLTNFSTIKKRIERMKELERM---D 121 Query: 127 NQG-----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 122 AEGILDTDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 182 IPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVMANAIVEG 225 >gi|317471761|ref|ZP_07931100.1| ribosomal protein S2 [Anaerostipes sp. 3_2_56FAA] gi|316900738|gb|EFV22713.1| ribosomal protein S2 [Anaerostipes sp. 3_2_56FAA] Length = 242 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 150/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + + VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKECVAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+ ++++ + Sbjct: 64 GGKILFVGTKKQAQDSIKTEAERCGMFYVNQRWLGGMLTNFKTIRSRIDRLKKIKKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE L + ++ DKL++ L GI +M +PD++F+VD +E + +QEA L I Sbjct: 122 EDGTFEVLPKKEVLELRKEMDKLQKNLGGIEEMNEIPDMIFIVDPKKENICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P+V + DTNS+P+ ++Y+IPGNDD+ R++ L +A A ++ Sbjct: 182 PLVGIADTNSDPEDLEYIIPGNDDAIRAVKLITSAMADAVVE 223 >gi|315173663|gb|EFU17680.1| ribosomal protein S2 [Enterococcus faecalis TX1346] Length = 261 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 150/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + + Sbjct: 64 GGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L I Sbjct: 122 EDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 224 >gi|257082021|ref|ZP_05576382.1| 30S ribosomal protein S2 [Enterococcus faecalis E1Sol] gi|256990051|gb|EEU77353.1| 30S ribosomal protein S2 [Enterococcus faecalis E1Sol] Length = 261 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 150/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + + Sbjct: 64 GGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L I Sbjct: 122 EDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 182 PIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 224 >gi|290968864|ref|ZP_06560401.1| ribosomal protein S2 [Megasphaera genomosp. type_1 str. 28L] gi|290781160|gb|EFD93751.1| ribosomal protein S2 [Megasphaera genomosp. type_1 str. 28L] Length = 244 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 152/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+R+IF ERN +IIDL +TV ++A D VA G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKTEEAYNFARDLVADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK QA + + A+R + +N +WLGGM+TN++T+ + +++L+ LE+ E Sbjct: 65 GKILFVGTKKQAQESIKNEAERCNMFYINERWLGGMLTNFQTIEKRVKRLKLLEK--QAE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE ++ + +KL + L GI++M LPD +F++D +E++A+ EAR+L IP Sbjct: 123 DGTFDVLPKKEVTILKHEMEKLHKYLGGIKEMKKLPDALFIIDPKKEEIAVAEARKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+A VDTN +PDL+D+ IP NDD+ R++ L +A A ++G Sbjct: 183 IIATVDTNCDPDLIDFPIPANDDAIRAVKLLSGKIADAVLEG 224 >gi|121608410|ref|YP_996217.1| 30S ribosomal protein S2 [Verminephrobacter eiseniae EF01-2] gi|166226767|sp|A1WHU2|RS2_VEREI RecName: Full=30S ribosomal protein S2 gi|121553050|gb|ABM57199.1| SSU ribosomal protein S2P [Verminephrobacter eiseniae EF01-2] Length = 250 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 97/221 (43%), Positives = 149/221 (67%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+GV FGH+ WNPKM YIF RN HII+L +++P+ Q+A + + A Sbjct: 4 SMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQQAQKFVRQLAANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + + A R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQAREILATEALRAGMPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ DKL++ + GI+DM LP+ +FV+D K+A+ EA++L I ++ Sbjct: 124 LDSLSKKEQLTFSREIDKLEKDIGGIQDMSALPNAIFVIDVGFHKIAVAEAKKLGIALIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P+ +DYVIPGNDDS++++AL+ +A A I+G A Sbjct: 184 VVDTNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224 >gi|319760408|ref|YP_004124346.1| 30S ribosomal protein S20 [Candidatus Blochmannia vafer str. BVAF] gi|318039122|gb|ADV33672.1| 30S ribosomal protein S20 [Candidatus Blochmannia vafer str. BVAF] Length = 234 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/220 (45%), Positives = 150/220 (68%), Gaps = 1/220 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +IR++L++GV FGH+ WNPKM+ +IF +N HIIDL +T+ M KAL + Sbjct: 2 MKKLSIREMLQAGVHFGHQTRYWNPKMKPFIFGVQNKIHIIDLDKTILMFNKALVELKKI 61 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 G+ILFV TK A + + A Q+ VN +WLGGM+TNWKTV QSI++L++LE + Sbjct: 62 TTLKGKILFVGTKRAARESIKSTALICGQFFVNHRWLGGMLTNWKTVRQSIKRLKELENQ 121 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + Q TKKE L ++ + L+ +L GI++MGGLPD +F V E +AI+EA L Sbjct: 122 SQDGTFQKLTKKEVLILKHELRGLENSLGGIKNMGGLPDAIFTVGAIHEHIAIKEANSLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP+ A+VDT+SNPD VD++IPGNDD++R+I L+ ++V++ Sbjct: 182 IPVFAIVDTDSNPDGVDFIIPGNDDATRAINLYLNIVSNV 221 >gi|255994507|ref|ZP_05427642.1| ribosomal protein S2 [Eubacterium saphenum ATCC 49989] gi|255993220|gb|EEU03309.1| ribosomal protein S2 [Eubacterium saphenum ATCC 49989] Length = 263 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 145/220 (65%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+L+ESG+ FGH+ WNPKM YIF ERN HIIDL +T + KA ++ V G Sbjct: 5 TVRKLMESGLHFGHQTKRWNPKMAPYIFTERNGVHIIDLQKTEKQVNKAYAFFANVVKTG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + AKR + VN +WLGGM+TN+KT++Q I++LR +EE+ Sbjct: 65 KPILFVGTKKQARSVIEAEAKRCDMFYVNHRWLGGMLTNYKTITQRIRRLRKIEEMAEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE L ++R+ D+L++ L GI+DM G+P +F++D E A++EA++L IPIV Sbjct: 125 TFEKLSKKEVLQLKREGDRLEKFLGGIKDMRGIPAALFIIDPKTENNAVKEAKKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+ DTN+NP+ VD IPGN D R L L+A A ++G Sbjct: 185 ALADTNANPEEVDIPIPGNVDGVRGARLITSLMADAILEG 224 >gi|162448000|ref|YP_001621132.1| 30S ribosomal protein S2 [Acholeplasma laidlawii PG-8A] gi|189044925|sp|A9NHC6|RS2_ACHLI RecName: Full=30S ribosomal protein S2 gi|161986107|gb|ABX81756.1| small subunit ribosomal protein S2 [Acholeplasma laidlawii PG-8A] Length = 342 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 146/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLESGV FGH+ WNPKM YIF R + HIIDL +T ++KA + D G Sbjct: 5 SMKQLLESGVHFGHQTRRWNPKMAPYIFTSRKDIHIIDLKRTALEIEKAYAALYDIAKDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QAS+ + E A R+ Q+ V+ +WLGG +TN+KT+ Q I+ L L E Sbjct: 65 GTVLFVGTKKQASEAIKEEAIRAGQFYVDHRWLGGTLTNFKTIRQRIKLLHS---LYAAE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE L + R+R KL+R L GI+DM +P +FVVD E++A++EAR+L I Sbjct: 122 ADGTWAKLPKKEVLGLSRQRIKLERFLGGIKDMQRIPQALFVVDPRTEEIAVKEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ +VDTN +PDLVDY+IP NDD+ R++ L ++A+A ++ Sbjct: 182 PVFGIVDTNCDPDLVDYIIPANDDAIRAVKLLTWVMANAVVEA 224 >gi|149183990|ref|ZP_01862360.1| 30S ribosomal protein S2 [Bacillus sp. SG-1] gi|148848299|gb|EDL62579.1| 30S ribosomal protein S2 [Bacillus sp. SG-1] Length = 236 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELAGN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V E A+R+ Y +N +WLGG +TN++T+ + I +L+ +E++ + Sbjct: 64 GGKVLFVGTKKQAQESVKEEAERAGMYFINQRWLGGTLTNFETIQKRISRLKLIEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ ++L + L GI+DM LPD +F++D +E++A+ EAR+L I Sbjct: 122 EDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMQELPDALFIIDPRKERIAVAEARKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEA 224 >gi|295696143|ref|YP_003589381.1| ribosomal protein S2 [Bacillus tusciae DSM 2912] gi|295411745|gb|ADG06237.1| ribosomal protein S2 [Bacillus tusciae DSM 2912] Length = 231 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/220 (45%), Positives = 149/220 (67%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A Q + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMQKYIFTERNGIYIIDLQKTVKKVEEAYQFVRSLAEEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D V E A+R + VN +WLGG +TN++T+ + I +L +LE + Sbjct: 65 KTLLFVGTKKQAQDSVREEAERCGMFYVNQRWLGGTLTNFQTIRRRIDRLHELERMEEDG 124 Query: 127 NQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 K+ +N+ RK +++L++ L GI+ M LP +FV+D +E++A+ EAR+L IPIV Sbjct: 125 TFEVLPKKEVNLLRKEKERLEKFLGGIKGMKDLPGALFVIDPRKERIAVAEARKLGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 185 AIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADAVLEG 224 >gi|76787145|ref|YP_330449.1| 30S ribosomal protein S2 [Streptococcus agalactiae A909] gi|77405661|ref|ZP_00782749.1| ribosomal protein S2 [Streptococcus agalactiae H36B] gi|77411541|ref|ZP_00787884.1| ribosomal protein S2 [Streptococcus agalactiae CJB111] gi|123601221|sp|Q3JZ54|RS2_STRA1 RecName: Full=30S ribosomal protein S2 gi|76562202|gb|ABA44786.1| ribosomal protein S2 [Streptococcus agalactiae A909] gi|77162395|gb|EAO73363.1| ribosomal protein S2 [Streptococcus agalactiae CJB111] gi|77175734|gb|EAO78515.1| ribosomal protein S2 [Streptococcus agalactiae H36B] Length = 256 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 155/224 (69%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V E AKR+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVAEEAKRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFELLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 224 >gi|22537971|ref|NP_688822.1| 30S ribosomal protein S2 [Streptococcus agalactiae 2603V/R] gi|25011912|ref|NP_736307.1| 30S ribosomal protein S2 [Streptococcus agalactiae NEM316] gi|76797881|ref|ZP_00780144.1| ribosomal protein S2 [Streptococcus agalactiae 18RS21] gi|77408437|ref|ZP_00785176.1| ribosomal protein S2 [Streptococcus agalactiae COH1] gi|77414272|ref|ZP_00790432.1| ribosomal protein S2 [Streptococcus agalactiae 515] gi|61215770|sp|Q8DXL8|RS2_STRA5 RecName: Full=30S ribosomal protein S2 gi|61215772|sp|Q8E388|RS2_STRA3 RecName: Full=30S ribosomal protein S2 gi|22534872|gb|AAN00695.1|AE014275_3 ribosomal protein S2 [Streptococcus agalactiae 2603V/R] gi|24413454|emb|CAD47532.1| ribosomal protein S2 [Streptococcus agalactiae NEM316] gi|76586784|gb|EAO63279.1| ribosomal protein S2 [Streptococcus agalactiae 18RS21] gi|77159688|gb|EAO70839.1| ribosomal protein S2 [Streptococcus agalactiae 515] gi|77172960|gb|EAO76090.1| ribosomal protein S2 [Streptococcus agalactiae COH1] Length = 256 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 155/224 (69%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V E AKR+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVAEEAKRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFELLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 224 >gi|169824403|ref|YP_001692014.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 29328] gi|302380619|ref|ZP_07269084.1| ribosomal protein S2 [Finegoldia magna ACS-171-V-Col3] gi|303233747|ref|ZP_07320401.1| ribosomal protein S2 [Finegoldia magna BVS033A4] gi|238687736|sp|B0S184|RS2_FINM2 RecName: Full=30S ribosomal protein S2 gi|167831208|dbj|BAG08124.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 29328] gi|302311562|gb|EFK93578.1| ribosomal protein S2 [Finegoldia magna ACS-171-V-Col3] gi|302495181|gb|EFL54933.1| ribosomal protein S2 [Finegoldia magna BVS033A4] Length = 269 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV + A + D VA G Sbjct: 5 SMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKQIDDAYNYVRDIVADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + + AKR Q+ V+ +WLGGM+TN+KT+ I +L L E+ +E Sbjct: 65 GEVLFVGTKKQAQEAIETEAKRCGQHFVSQRWLGGMLTNYKTIKTRINRLHKLYEM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE +ER+R+KL++ L GIR M +P ++FVVD +E +A+ EA+ L IP Sbjct: 123 DGTFDLLPKKEVSQLEREREKLEKNLGGIRKMNKMPSVLFVVDPKKEYIAVHEAKILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V +VDTN +PD +D IPGNDD+ R++ L +A A I+ Sbjct: 183 VVGIVDTNCDPDELDIAIPGNDDAIRAVKLLTSTIADAVIEA 224 >gi|33152638|ref|NP_873991.1| 30S ribosomal protein S2 [Haemophilus ducreyi 35000HP] gi|61215715|sp|Q7VL79|RS2_HAEDU RecName: Full=30S ribosomal protein S2 gi|33148862|gb|AAP96380.1| 30S ribosomal protein S2 [Haemophilus ducreyi 35000HP] Length = 238 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKVLFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD ++Y+IPGNDD++R+I L+ D ++A +G Sbjct: 181 IPVFAIVDTNSTPDGINYIIPGNDDATRAIQLYLDAASAAVKEG 224 >gi|282850146|ref|ZP_06259525.1| ribosomal protein S2 [Veillonella parvula ATCC 17745] gi|294791798|ref|ZP_06756946.1| ribosomal protein S2 [Veillonella sp. 6_1_27] gi|294793659|ref|ZP_06758796.1| ribosomal protein S2 [Veillonella sp. 3_1_44] gi|282579639|gb|EFB85043.1| ribosomal protein S2 [Veillonella parvula ATCC 17745] gi|294455229|gb|EFG23601.1| ribosomal protein S2 [Veillonella sp. 3_1_44] gi|294457028|gb|EFG25390.1| ribosomal protein S2 [Veillonella sp. 6_1_27] Length = 250 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + ++G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREVASQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + E Sbjct: 65 EVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + DKL++ L GI+DM +P +FVVD +EK+AI EA++L IP Sbjct: 123 DGTFEVLPKKEVIGLRHEMDKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA VDTN +PD VD+ IP NDD+ R++ L +A A ++G Sbjct: 183 VVATVDTNCDPDEVDFPIPANDDAIRAVKLLAGKMADAVLEG 224 >gi|319745770|gb|EFV98065.1| 30S ribosomal protein S2 [Streptococcus agalactiae ATCC 13813] Length = 256 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 155/224 (69%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V E AKR+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVAEEAKRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFELLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEG 224 >gi|288575129|ref|ZP_06393486.1| ribosomal protein S2 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570870|gb|EFC92427.1| ribosomal protein S2 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 265 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 157/223 (70%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE GV FGH+ WNPKM+ +IF ERN +IIDL +TV L+K+ + + G Sbjct: 5 SMKQLLECGVHFGHQTRRWNPKMKPFIFTERNGVYIIDLQKTVRGLEKSYSFLREVSKEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA D + E A R Q+ +N +WLGG++TN++T+ + + K+ +L+ + E Sbjct: 65 GSVLFVGTKRQAQDTIREEAIRCGQHYINQRWLGGLLTNFQTIRKRVLKMVELDRM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKE + +++++ KL++ L GI++M LPD +F++D RE +A++EAR++ I Sbjct: 122 SDGSWDDLTKKEVVLLKKQKAKLEKYLLGIKNMKVLPDAIFIIDPRREDIAVKEARKIGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++++VDTN +P+++DY IPGNDD+ R+I L L+ASA I+G Sbjct: 182 PVISIVDTNCDPEVIDYPIPGNDDAIRAIKLISGLMASAVIEG 224 >gi|256851269|ref|ZP_05556658.1| ribosomal protein S2 [Lactobacillus jensenii 27-2-CHN] gi|260660693|ref|ZP_05861608.1| ribosomal protein S2 [Lactobacillus jensenii 115-3-CHN] gi|282934737|ref|ZP_06339980.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] gi|297206136|ref|ZP_06923531.1| 30S ribosomal protein S2 [Lactobacillus jensenii JV-V16] gi|256616331|gb|EEU21519.1| ribosomal protein S2 [Lactobacillus jensenii 27-2-CHN] gi|260548415|gb|EEX24390.1| ribosomal protein S2 [Lactobacillus jensenii 115-3-CHN] gi|281301312|gb|EFA93613.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] gi|297149262|gb|EFH29560.1| 30S ribosomal protein S2 [Lactobacillus jensenii JV-V16] Length = 260 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 145/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQND 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+ L+ + E Sbjct: 65 GVFLFVGTKKQAQEAIKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKAM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL+R L GI DM +PD+MFVVD +EK+A+ EA +L IP Sbjct: 123 DGTFDLLPKKEVALLTKEMDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPTPIDVIIPANDDAIRAIRLIAGAMADAVIEG 224 >gi|257464019|ref|ZP_05628404.1| 30S ribosomal protein S2 [Fusobacterium sp. D12] gi|317061540|ref|ZP_07926025.1| SSU ribosomal protein S2P [Fusobacterium sp. D12] gi|313687216|gb|EFS24051.1| SSU ribosomal protein S2P [Fusobacterium sp. D12] Length = 247 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 106/257 (41%), Positives = 160/257 (62%), Gaps = 20/257 (7%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ ++ A + V Sbjct: 4 ITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEAAYDEMRKIVED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + E A+R+ Y VNS+WLGGM+TN+ T+ I++L++LE + Sbjct: 64 GGKVLFVGTKKQAQEAIKEQAERAGMYYVNSRWLGGMLTNFSTIKGRIERLKELERM--- 120 Query: 126 ENQG-----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G +TKKE + ++ KL + L GI++M +P +FVVD E+LA+ EA L Sbjct: 121 EAEGILDTAYTKKEAASFRKELAKLAKNLTGIKEMKEVPQAIFVVDVKMEELAVTEADHL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD V + IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDKVTFPIPANDDAIRSVKLITSVMANAIVEG------------NQG 228 Query: 241 GETVVHSKEGMQLEEDS 257 ETV + E +Q+EE S Sbjct: 229 KETVEPASEEIQVEEGS 245 >gi|291522664|emb|CBK80957.1| SSU ribosomal protein S2P [Coprococcus catus GD/7] Length = 243 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 149/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A I D VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYNAIKDIVAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E++ Sbjct: 64 GGTILFVGTKKQAQDAIKAEAERCGMYYVNQRWLGGMLTNFKTIESRIARLKAIEKM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI+DM +PD +F+VD +E++ +QEA L I Sbjct: 122 EDGTFEVLPKKEVIELKKEWEKLEKNLGGIKDMKRIPDAIFIVDPKKERICVQEAHILGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 182 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 223 >gi|297566377|ref|YP_003685349.1| 30S ribosomal protein S2 [Meiothermus silvanus DSM 9946] gi|296850826|gb|ADH63841.1| ribosomal protein S2 [Meiothermus silvanus DSM 9946] Length = 251 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 103/257 (40%), Positives = 163/257 (63%), Gaps = 14/257 (5%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LLE+GV FGH WNPKM+RYI+ ERN IIDL +T+ +++ + + D RGG Sbjct: 7 IKELLEAGVHFGHETKRWNPKMKRYIYAERNGIFIIDLQKTMVEIERTFKYVQDLAMRGG 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 IL+V TK QA + V + A R+ VN +WLGGM+TN++T++ + +L++LE L ++E Sbjct: 67 TILYVGTKKQAQEIVQQEADRAGMPYVNQRWLGGMLTNFRTITAQVNRLQELENLFASEE 126 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K E++ ++ + D+L++ L G R + LPD +FV+D +E +A++EAR+L IP+VA Sbjct: 127 INERVKTEQVRLKHEMDRLQKNLGGFRKLKRLPDALFVIDPTKEAIAVKEARKLGIPVVA 186 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S+PDL DY+IPGNDD+ RSI L + + +T+ T + Sbjct: 187 LADTDSDPDLCDYIIPGNDDAIRSIQLIVTRLTDLIV------------ETRGGAATPIR 234 Query: 247 SKEGMQLEEDSQSSESS 263 + +LEE SQ+ E++ Sbjct: 235 ATAPTELEE-SQAEEAN 250 >gi|257090592|ref|ZP_05584953.1| 30S ribosomal protein S2P [Enterococcus faecalis CH188] gi|312905122|ref|ZP_07764243.1| ribosomal protein S2 [Enterococcus faecalis TX0635] gi|256999404|gb|EEU85924.1| 30S ribosomal protein S2P [Enterococcus faecalis CH188] gi|310631512|gb|EFQ14795.1| ribosomal protein S2 [Enterococcus faecalis TX0635] gi|315579049|gb|EFU91240.1| ribosomal protein S2 [Enterococcus faecalis TX0630] Length = 261 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 148/224 (66%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 64 GGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 121 EEDGIFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEG 224 >gi|104774224|ref|YP_619204.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514312|ref|YP_813218.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274956|sp|Q049U2|RS2_LACDB RecName: Full=30S ribosomal protein S2 gi|123378422|sp|Q1G9N6|RS2_LACDA RecName: Full=30S ribosomal protein S2 gi|103423305|emb|CAI98146.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093627|gb|ABJ58780.1| SSU ribosomal protein S2P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 253 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 148/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ W+PKM+ YIF +RN+ +IIDL +T+ ML A + Sbjct: 5 SMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNDIYIIDLQKTIKMLDDAYNYVKAVAQDD 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ E Sbjct: 65 GVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L IP Sbjct: 123 DGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGTMADAVIEG 224 >gi|313885307|ref|ZP_07819058.1| ribosomal protein S2 [Eremococcus coleocola ACS-139-V-Col8] gi|312619413|gb|EFR30851.1| ribosomal protein S2 [Eremococcus coleocola ACS-139-V-Col8] Length = 256 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 159/221 (71%), Gaps = 5/221 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ +A + D A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDQAYNFMRDNSADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + EAA+RS QY +N +WLGG++TNW+T+ QSI++L+ +E++ +E Sbjct: 65 GVVLFVGTKKQAQQAIQEAAERSGQYYINHRWLGGLLTNWETIQQSIRRLKSIEKM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L + ++ +L++ L GI+DM +PD++FVVD +E++A++EA L IP Sbjct: 123 DGTFDLLPKKEVLQLRKELARLEQNLGGIKDMPRIPDVIFVVDPRKEQIAVKEAHTLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VA+VDTN +PD +D VIP NDD+ R+I L + +A A I+ Sbjct: 183 VVAMVDTNCDPDEIDAVIPSNDDAIRAIKLIANTMAEAVIE 223 >gi|294790923|ref|ZP_06756081.1| ribosomal protein S2 [Scardovia inopinata F0304] gi|294458820|gb|EFG27173.1| ribosomal protein S2 [Scardovia inopinata F0304] Length = 299 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 157/240 (65%), Gaps = 2/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ Q+L +GV FGH+ WNPKM+++I ERN HII+L +++ M+ A I +T Sbjct: 1 MAQITMSQMLNAGVHFGHQTRRWNPKMKQFILMERNGIHIINLFKSLDMIDAAYTFIKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QAS+ + A R V+ +WLGGM+TN++TVS+ + ++++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQASEAIAAEATRVGMPYVSERWLGGMLTNFQTVSKRVARMKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L +ER++DKL + L GIR M P +FVVD N+E LA++EA +L Sbjct: 121 DFSDVRSSGLTKKELLLLEREKDKLVKQLGGIRTMNRTPSALFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +PD VDY IP NDD+ R + L L+A A +G+ + G D A Sbjct: 181 NIPVVALVDTNCDPDSVDYAIPANDDAIRGVRLLTSLMADAVAEGLLARSGKAGKDDTGA 240 >gi|238854752|ref|ZP_04645082.1| ribosomal protein S2 [Lactobacillus jensenii 269-3] gi|260663984|ref|ZP_05864837.1| ribosomal protein S2 [Lactobacillus jensenii SJ-7A-US] gi|282932857|ref|ZP_06338254.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] gi|313472272|ref|ZP_07812764.1| ribosomal protein S2 [Lactobacillus jensenii 1153] gi|238832542|gb|EEQ24849.1| ribosomal protein S2 [Lactobacillus jensenii 269-3] gi|239529671|gb|EEQ68672.1| ribosomal protein S2 [Lactobacillus jensenii 1153] gi|260561870|gb|EEX27839.1| ribosomal protein S2 [Lactobacillus jensenii SJ-7A-US] gi|281302892|gb|EFA95097.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] Length = 257 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 145/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 5 TMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQND 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+ L+ + E Sbjct: 65 GVFLFVGTKKQAQEAIKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKAM--SE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL+R L GI DM +PD+MFVVD +EK+A+ EA +L IP Sbjct: 123 DGTFDLLPKKEVALLTKEMDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPTPIDVIIPANDDAIRAIRLIAGAMADAVIEG 224 >gi|167760592|ref|ZP_02432719.1| hypothetical protein CLOSCI_02966 [Clostridium scindens ATCC 35704] gi|167661813|gb|EDS05943.1| hypothetical protein CLOSCI_02966 [Clostridium scindens ATCC 35704] Length = 275 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 150/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q +SD A Sbjct: 31 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYQAVSDIAAD 90 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + ++R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 91 GGTILFVGTKKQAQDAIKVESERCGMYYVNERWLGGMLTNFKTIKSRIARLKEIERM--S 148 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI++M LPD +FVVD +E++ +QEA L I Sbjct: 149 EDGTFDVLPKKEVIQLKKEWEKLEKNLGGIKEMKKLPDAIFVVDPKKERICVQEAHTLGI 208 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 209 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 251 >gi|167746950|ref|ZP_02419077.1| hypothetical protein ANACAC_01662 [Anaerostipes caccae DSM 14662] gi|167653910|gb|EDR98039.1| hypothetical protein ANACAC_01662 [Anaerostipes caccae DSM 14662] Length = 237 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 97/220 (44%), Positives = 149/220 (67%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + + VA GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKECVAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+ ++++ +E+ Sbjct: 61 KILFVGTKKQAQDSIKTEAERCGMFYVNQRWLGGMLTNFKTIRSRIDRLKKIKKM--EED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE L + ++ DKL++ L GI +M +PD++F+VD +E + +QEA L IP+ Sbjct: 119 GTFEVLPKKEVLELRKEMDKLQKNLGGIEEMNEIPDMIFIVDPKKENICVQEAHTLGIPL 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 V + DTNS+P+ ++Y+IPGNDD+ R++ L +A A ++ Sbjct: 179 VGIADTNSDPEDLEYIIPGNDDAIRAVKLITSAMADAVVE 218 >gi|240949046|ref|ZP_04753398.1| 30S ribosomal protein S2 [Actinobacillus minor NM305] gi|240296559|gb|EER47182.1| 30S ribosomal protein S2 [Actinobacillus minor NM305] Length = 236 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK ASD V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKVLFVGTKRAASDAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D +A +G Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEG 224 >gi|221194635|ref|ZP_03567692.1| ribosomal protein S2 [Atopobium rimae ATCC 49626] gi|221185539|gb|EEE17929.1| ribosomal protein S2 [Atopobium rimae ATCC 49626] Length = 251 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 103/227 (45%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI+ LL++G +GH+ WNPKM+ YIF +RN +IIDL QT+ KA + D + Sbjct: 4 KITIQTLLDAGCHYGHQTRRWNPKMKPYIFGDRNGIYIIDLKQTMLGADKAYTFLKDLAS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 +GG ILFV TK QA + V AKR+ ++ +WLGGM+TN+ T+ IQ++ +LE ++ Sbjct: 64 KGGTILFVGTKKQAQEPVATQAKRANAPYIDQRWLGGMLTNFVTMRSRIQRMEELEAMVE 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + KKE+ ++ KLK L G+RDM LPD +FV+D+ RE+ AI+EA RL IP Sbjct: 124 DGRMEALPKKEQALRNKELAKLKLNLGGVRDMNKLPDALFVIDSKREENAIREANRLHIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +V+++DTNS+PD+VDY IP NDD+ RSI+L C+L A A + G ++ Sbjct: 184 VVSLLDTNSDPDVVDYGIPANDDAIRSISLMCELAADAILAGSGKEQ 230 >gi|39938651|ref|NP_950417.1| 30S ribosomal protein S2 [Onion yellows phytoplasma OY-M] gi|61215602|sp|Q6YR51|RS2_ONYPE RecName: Full=30S ribosomal protein S2 gi|39721760|dbj|BAD04250.1| ribosomal protein S2 [Onion yellows phytoplasma OY-M] Length = 271 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 104/223 (46%), Positives = 148/223 (66%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T +QLLESGV FGH WNPKM+ YIF RN HII+L +T ++KA Q + + + G Sbjct: 5 TTKQLLESGVYFGHATRKWNPKMKPYIFTSRNGIHIINLKKTSEEIEKAYQELLNIITSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ LF+ TK Q + E A+RS QY V+ +WLGG +TN+KT+ + I+ L L + +E Sbjct: 65 GKALFLGTKKQIQSAIREEAQRSQQYYVDHRWLGGTLTNFKTILKRIELLHLLHK---QE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + ++RKRDKL++ L GI+DM LP +FVVD +E +A+ EAR+L I Sbjct: 122 EEGLWKKLPKKEVVQLKRKRDKLEKFLGGIKDMKDLPQAIFVVDPEKESIAVAEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PDLVDY+IP NDD+ R + L L+A+A ++G Sbjct: 182 KVFGIVDTNCDPDLVDYIIPANDDAIRGVKLIIWLMANACVEG 224 >gi|323487197|ref|ZP_08092500.1| hypothetical protein HMPREF9474_04251 [Clostridium symbiosum WAL-14163] gi|323695132|ref|ZP_08109272.1| ribosomal protein S2 [Clostridium symbiosum WAL-14673] gi|323399423|gb|EGA91818.1| hypothetical protein HMPREF9474_04251 [Clostridium symbiosum WAL-14163] gi|323500813|gb|EGB16735.1| ribosomal protein S2 [Clostridium symbiosum WAL-14673] Length = 251 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 100/227 (44%), Positives = 154/227 (67%), Gaps = 7/227 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V ++ +A + ++D A Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGLVDEAYKAVADIAAD 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 69 GGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIGRLKQIETM--A 126 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ +QEA L I Sbjct: 127 EDGTFDVLPKKEVIALKKEWEKLEKNLGGIKEMKRVPDAIFVVDPKKERICVQEAHTLGI 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 P++ ++DTN +P+ +DYVIPGNDD+ R++ L +A A I+ ARQ Sbjct: 187 PLIGIIDTNCDPEELDYVIPGNDDAIRAVKLIVSRMADAVIE--ARQ 231 >gi|149928184|ref|ZP_01916429.1| 30S ribosomal protein S2 [Limnobacter sp. MED105] gi|149823075|gb|EDM82315.1| 30S ribosomal protein S2 [Limnobacter sp. MED105] Length = 251 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+G FGH+ WNPKM YI+ RN HII+L +TV ML AL+ + A Sbjct: 4 SMREMLEAGCHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTVVMLDDALKFVKRLSANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK QA + + E A+R V+ +WLGGM+TN+KTV SI++L+D+E ++ + Sbjct: 64 GNILFVCTKRQAKEIIAEEAQRCGMPYVDQRWLGGMLTNFKTVKTSIKRLKDMEAIIADG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE L R+ +KL +++ GI+DM LPD +FV D K+AI EA +L IP+V Sbjct: 124 GTERMSKKEALMFARELEKLNQSIGGIKDMPTLPDAIFVCDVGYHKIAITEAEKLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN +P V Y+IPGNDDS+R+I L+ VA A + G Sbjct: 184 GIVDTNHSPAGVSYIIPGNDDSARAIRLYARSVADAVLAG 223 >gi|325126009|gb|ADY85339.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 253 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 148/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ W+PKM+ YIF +RN+ +IIDL +T+ ML A + Sbjct: 5 SMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNDIYIIDLQKTIKMLDDAYNYVKAVAQDD 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ E Sbjct: 65 GVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L IP Sbjct: 123 DGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGTMADAVIEG 224 >gi|257063546|ref|YP_003143218.1| SSU ribosomal protein S2P [Slackia heliotrinireducens DSM 20476] gi|256791199|gb|ACV21869.1| SSU ribosomal protein S2P [Slackia heliotrinireducens DSM 20476] Length = 250 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 149/223 (66%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I+ LLE+G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +++T Sbjct: 1 MAKVSIKSLLEAGAHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLIGLDQAYSFVAET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG +LFV TK QA + V A R VN++WLGGM+TN+ T+ ++++ +LE + Sbjct: 61 AAKGGTVLFVGTKKQAQEAVATQADRCGMPYVNARWLGGMLTNFVTIRSRVKRMEELEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE++ + ++ KL+ L+GIR+M LPD +FVVDTNRE+LAI EA+RL Sbjct: 121 QADGRMEVLPKKEQILLNKELAKLQTNLNGIRNMTKLPDAVFVVDTNREQLAIHEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP+V +DTN +PD VD+ IP NDD+ RS+ L VA A ID Sbjct: 181 IPVVGTLDTNCDPDDVDFGIPANDDAIRSVNLLATFVADAVID 223 >gi|154504620|ref|ZP_02041358.1| hypothetical protein RUMGNA_02126 [Ruminococcus gnavus ATCC 29149] gi|153795102|gb|EDN77522.1| hypothetical protein RUMGNA_02126 [Ruminococcus gnavus ATCC 29149] Length = 244 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 149/220 (67%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + E+ Sbjct: 61 TILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERM--AED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++++ +KL++ L GI++M +PD +F+VD +E++ +QEA L IP+ Sbjct: 119 GTFDVLPKKEVIELKKEWEKLEKNLGGIKEMKKIPDAIFIVDPKKERICVQEAHTLGIPL 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 179 IGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 218 >gi|15594468|ref|NP_212257.1| 30S ribosomal protein S2 [Borrelia burgdorferi B31] gi|223889219|ref|ZP_03623808.1| ribosomal protein S2 [Borrelia burgdorferi 64b] gi|226320685|ref|ZP_03796243.1| ribosomal protein S2 [Borrelia burgdorferi 29805] gi|226321966|ref|ZP_03797491.1| ribosomal protein S2 [Borrelia burgdorferi Bol26] gi|3914881|sp|O51149|RS2_BORBU RecName: Full=30S ribosomal protein S2 gi|2688009|gb|AAC66511.1| ribosomal protein S2 (rpsB) [Borrelia burgdorferi B31] gi|223885468|gb|EEF56569.1| ribosomal protein S2 [Borrelia burgdorferi 64b] gi|226232556|gb|EEH31310.1| ribosomal protein S2 [Borrelia burgdorferi Bol26] gi|226233901|gb|EEH32624.1| ribosomal protein S2 [Borrelia burgdorferi 29805] gi|312147783|gb|ADQ30442.1| ribosomal protein S2 [Borrelia burgdorferi JD1] gi|312149370|gb|ADQ29441.1| ribosomal protein S2 [Borrelia burgdorferi N40] Length = 260 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 96/220 (43%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|325971046|ref|YP_004247237.1| ribosomal protein S2 [Spirochaeta sp. Buddy] gi|324026284|gb|ADY13043.1| ribosomal protein S2 [Spirochaeta sp. Buddy] Length = 296 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 148/220 (67%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ WNPKM R+IF +RN HIIDL +T + +A + V +G Sbjct: 5 TMKSLLESGVHFGHQTKRWNPKMARFIFSQRNGIHIIDLQKTSACIVEAYDAVRAVVKQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + AKR VN++WLGGM+TN+ T+ +SI L+ +E++ ++ Sbjct: 65 KTVLFVGTKKQAQQAIEAEAKRCGMPYVNNRWLGGMLTNFSTIKKSIATLKKIEKMEIDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE + +++ KL++ L GI+DM LP +F++DT +E +A+ EA+RL IP++ Sbjct: 125 TFDSLTKKEVSLLTKQKIKLEKNLGGIKDMKDLPGALFIIDTKKEAIAVTEAKRLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVDTN +P + Y IPGNDD+ R+I+LF +++A+A +D Sbjct: 185 AVVDTNCDPSDITYPIPGNDDAIRAISLFVEIIANAVVDA 224 >gi|187251058|ref|YP_001875540.1| 30S ribosomal protein S2 [Elusimicrobium minutum Pei191] gi|238058196|sp|B2KC76|RS2_ELUMP RecName: Full=30S ribosomal protein S2 gi|186971218|gb|ACC98203.1| Ribosomal protein S2 [Elusimicrobium minutum Pei191] Length = 324 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 149/223 (66%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ +LE+GV FGH+ WNPKM +YIF ERN HI+DL +T L+KA I + +G Sbjct: 5 SMKAMLEAGVHFGHQTSRWNPKMGQYIFGERNGVHILDLQKTAKELKKATAFIKEEAKKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QA + + A+R Y ++ KWLGG +TN++TV +S+++L +LE+ E Sbjct: 65 ARFLFVGTKKQAQEAIKSEAERCGAYVISEKWLGGTLTNFQTVKKSVERLNELEKW---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G +KKE + ++ +L+ L GIR+M LPD++FV+D + A++EA L I Sbjct: 122 REGVFKAISKKEASRLGKEMVRLQTLLGGIREMKSLPDVVFVIDPVDTQGAVKEAVILNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VAV DTN++PD +DY IPGNDD++RSI LFC VA + I+G Sbjct: 182 PVVAVCDTNADPDNIDYPIPGNDDAARSIKLFCAAVADSIIEG 224 >gi|329947865|ref|ZP_08294797.1| ribosomal protein S2 [Actinomyces sp. oral taxon 170 str. F0386] gi|328523489|gb|EGF50587.1| ribosomal protein S2 [Actinomyces sp. oral taxon 170 str. F0386] Length = 280 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 151/222 (68%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + VARG Sbjct: 5 TMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEIVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE++ + Sbjct: 65 GNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L IP+ Sbjct: 125 VAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ Sbjct: 185 IAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGL 226 >gi|320532039|ref|ZP_08032929.1| ribosomal protein S2 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135752|gb|EFW27810.1| ribosomal protein S2 [Actinomyces sp. oral taxon 171 str. F0337] Length = 282 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 151/222 (68%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + VARG Sbjct: 5 TMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEIVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE++ + Sbjct: 65 GNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L IP+ Sbjct: 125 VAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ Sbjct: 185 IAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGL 226 >gi|195941861|ref|ZP_03087243.1| 30S ribosomal protein S2 [Borrelia burgdorferi 80a] Length = 255 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 156/218 (71%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 1 MKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSVIKDGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 61 KVLFVGTKKQASEIIEQEAKRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI++ Sbjct: 121 FDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPIIS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 181 VVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 218 >gi|291545676|emb|CBL18784.1| SSU ribosomal protein S2P [Ruminococcus sp. SR1/5] Length = 242 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 106/252 (42%), Positives = 160/252 (63%), Gaps = 14/252 (5%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D VA GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADIVANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D + A+R ++ VN +WLGGM+TN+KT+ I +L+++E + E Sbjct: 61 HILFVGTKKQAQDAIRTEAERCGEFFVNERWLGGMLTNFKTIQSRIARLKEIETM---EA 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KKE + + ++ KL++ L GI++M +PD +F+VD +E++ +QEA L IP Sbjct: 118 DGTFDVLPKKEVIELRKELVKLQKNLGGIKEMKRIPDAIFIVDPKKERICVQEAHTLGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ A+Q + ++ GE Sbjct: 178 LIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE--AKQGT-----AEADGEI 230 Query: 244 VVHSKEGMQLEE 255 S+E EE Sbjct: 231 EAESEEFAATEE 242 >gi|218249399|ref|YP_002374651.1| ribosomal protein S2 [Borrelia burgdorferi ZS7] gi|226697634|sp|B7J156|RS2_BORBZ RecName: Full=30S ribosomal protein S2 gi|218164587|gb|ACK74648.1| ribosomal protein S2 [Borrelia burgdorferi ZS7] Length = 262 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 96/220 (43%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|216264298|ref|ZP_03436290.1| ribosomal protein S2 [Borrelia burgdorferi 156a] gi|221217440|ref|ZP_03588911.1| ribosomal protein S2 [Borrelia burgdorferi 72a] gi|224534026|ref|ZP_03674610.1| ribosomal protein S2 [Borrelia burgdorferi CA-11.2a] gi|225549268|ref|ZP_03770241.1| ribosomal protein S2 [Borrelia burgdorferi 94a] gi|225549832|ref|ZP_03770794.1| ribosomal protein S2 [Borrelia burgdorferi 118a] gi|215980771|gb|EEC21578.1| ribosomal protein S2 [Borrelia burgdorferi 156a] gi|221192718|gb|EEE18934.1| ribosomal protein S2 [Borrelia burgdorferi 72a] gi|224512862|gb|EEF83229.1| ribosomal protein S2 [Borrelia burgdorferi CA-11.2a] gi|225369523|gb|EEG98974.1| ribosomal protein S2 [Borrelia burgdorferi 118a] gi|225370126|gb|EEG99566.1| ribosomal protein S2 [Borrelia burgdorferi 94a] Length = 260 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 157/219 (71%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 5 TMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 65 KKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI+ Sbjct: 125 TFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 185 SVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|187918001|ref|YP_001883564.1| 30S ribosomal protein S2 [Borrelia hermsii DAH] gi|238689277|sp|B2RZI8|RS2_BORHD RecName: Full=30S ribosomal protein S2 gi|119860849|gb|AAX16644.1| SSU ribosomal protein S2P [Borrelia hermsii DAH] Length = 254 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 96/220 (43%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSVIKS 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEAKRSDMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKMEID 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE + R++ KL + L GI+DM LP +F++D RE++ I EAR+L IPI Sbjct: 124 GTFEMISKKEVSQLNREKLKLSKNLTGIKDMEELPGAVFIIDPKREQIVINEARKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|295425174|ref|ZP_06817877.1| 30S ribosomal protein S2 [Lactobacillus amylolyticus DSM 11664] gi|295064950|gb|EFG55855.1| 30S ribosomal protein S2 [Lactobacillus amylolyticus DSM 11664] Length = 258 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 144/222 (64%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFVKSVAQEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA D + E A R QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 65 GVFLFVGTKKQAQDSIAEEATRCGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM--SQ 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +KL+R L GI DM +PD++FVVD +EK+A+ EA L IP Sbjct: 123 DGTFDVLPKKEAALLTKEMNKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A ++G Sbjct: 183 VVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIVGAMADAIVEG 224 >gi|284048718|ref|YP_003399057.1| ribosomal protein S2 [Acidaminococcus fermentans DSM 20731] gi|283952939|gb|ADB47742.1| ribosomal protein S2 [Acidaminococcus fermentans DSM 20731] Length = 249 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++ + + A+G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEECYSFLRELAAQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + E A+R + VN +WLGGM+TN+KT+ I++L DLE++ E Sbjct: 65 GTVLFVGTKKQAQAAIKEEAERCGMFYVNERWLGGMLTNFKTIQTRIKRLHDLEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + + + KL++ L GI+DM LP +FV+D +E AI EAR+L I Sbjct: 122 EEGTFELLPKKEVIVLRHEMAKLEKYLGGIKDMKKLPSALFVIDPRKEHNAILEARKLHI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA VDTN +PD VDY++P NDD+ R++ L +A A ++G Sbjct: 182 PIVATVDTNCDPDEVDYLMPANDDAIRAVRLLTSKMADAVLEG 224 >gi|313893378|ref|ZP_07826950.1| ribosomal protein S2 [Veillonella sp. oral taxon 158 str. F0412] gi|313442019|gb|EFR60439.1| ribosomal protein S2 [Veillonella sp. oral taxon 158 str. F0412] Length = 239 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + ++G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYSFLREVASQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + E Sbjct: 65 EVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L IP Sbjct: 123 DGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA VDTN +PD VD+ IP NDD+ R++ L +A A ++G Sbjct: 183 VVATVDTNCDPDEVDFPIPANDDAIRAVKLLAGKMADAVLEG 224 >gi|326771760|ref|ZP_08231045.1| ribosomal protein S2 [Actinomyces viscosus C505] gi|326637893|gb|EGE38794.1| ribosomal protein S2 [Actinomyces viscosus C505] Length = 285 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 151/222 (68%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + VARG Sbjct: 5 TMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEIVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE++ + Sbjct: 65 GNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L IP+ Sbjct: 125 VAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ Sbjct: 185 IAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGL 226 >gi|160895221|ref|ZP_02075993.1| hypothetical protein CLOL250_02781 [Clostridium sp. L2-50] gi|156863100|gb|EDO56531.1| hypothetical protein CLOL250_02781 [Clostridium sp. L2-50] Length = 250 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 146/223 (65%), Gaps = 7/223 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YI+ ERN +IIDL ++V M+ A I D VA Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMKPYIYTERNGIYIIDLQKSVGMVDDAYNAIGDCVAN 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+ T+ I L+ E + Sbjct: 69 GGKILFVGTKKQAQDSIKSEAERCGMYYVNERWLGGMLTNFSTIQTRIATLKKYEAM--- 125 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + I+++ +KL++ L GI++M +PD++FVVD +E++ IQEA L Sbjct: 126 EADGTFDVLPKKEVIQIKKEMEKLQKNLGGIKEMKEIPDMIFVVDPKKERICIQEAHSLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I +V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 186 IKLVGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 228 >gi|225551899|ref|ZP_03772839.1| ribosomal protein S2 [Borrelia sp. SV1] gi|225370897|gb|EEH00327.1| ribosomal protein S2 [Borrelia sp. SV1] Length = 260 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 157/219 (71%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 5 TMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQKVIKDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 65 KKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI+ Sbjct: 125 TFDMISKKEISQLNREKSKLAKNLTGIKDMEILPGAIFIIDPKREQIAINEARKLKIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 185 SVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|166033398|ref|ZP_02236227.1| hypothetical protein DORFOR_03124 [Dorea formicigenerans ATCC 27755] gi|166027755|gb|EDR46512.1| hypothetical protein DORFOR_03124 [Dorea formicigenerans ATCC 27755] Length = 244 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/220 (45%), Positives = 149/220 (67%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A +SD A+GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYYAVSDIAAQGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+++E + E+ Sbjct: 61 TILFVGTKKQAQDAIKVEAERCGMYYVNERWLGGMLTNFKTIKSRIARLKEIERM--SED 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + I+++ +KL++ L GI++M +PD +FVVD +E++ +QEA L IP+ Sbjct: 119 GTFDVLPKKEVIQIKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHTLGIPL 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 179 IGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 218 >gi|300812589|ref|ZP_07093006.1| ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496462|gb|EFK31567.1| ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 253 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 5 SMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQDD 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ E Sbjct: 65 GVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L IP Sbjct: 123 DGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGTMADAVIEG 224 >gi|313124041|ref|YP_004034300.1| 30S ribosomal protein s2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280604|gb|ADQ61323.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 253 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 5 SMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQDD 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ E Sbjct: 65 GVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L IP Sbjct: 123 DGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAVIEG 224 >gi|325067050|ref|ZP_08125723.1| ribosomal protein S2 [Actinomyces oris K20] Length = 240 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 151/222 (68%), Gaps = 2/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + VARG Sbjct: 5 TMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEIVARG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LN 124 G ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE++ + Sbjct: 65 GNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQIDFDD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L IP+ Sbjct: 125 VAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ Sbjct: 185 IAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGL 226 >gi|257453217|ref|ZP_05618516.1| 30S ribosomal protein S2 [Fusobacterium sp. 3_1_5R] gi|317059751|ref|ZP_07924236.1| SSU ribosomal protein S2P [Fusobacterium sp. 3_1_5R] gi|313685427|gb|EFS22262.1| SSU ribosomal protein S2P [Fusobacterium sp. 3_1_5R] Length = 247 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 148/225 (65%), Gaps = 8/225 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ ++ A + V Sbjct: 4 ITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIETAYDEMRKIVED 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ I++L++LE + Sbjct: 64 GGKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKGRIERLKELERM--- 120 Query: 126 ENQG-----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G +TKKE ++ KL + L GI++M +P +FVVD E+LA+ EA L Sbjct: 121 EAEGILDTAYTKKEAATFRKELAKLSKNLTGIKEMKEVPQAIFVVDVKMEELAVTEADHL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A++DTN +PD V + IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDKVTFPIPANDDAIRSVKLITSVMANAIVEG 225 >gi|167855468|ref|ZP_02478232.1| hypothetical protein HPS_04688 [Haemophilus parasuis 29755] gi|167853397|gb|EDS24647.1| hypothetical protein HPS_04688 [Haemophilus parasuis 29755] Length = 241 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ AL ++ Sbjct: 1 MAQVSMRDMLNAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNDALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK ASD V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKILFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L+ R KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALDRTRDMAKLELSLGGIKDMSGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTN++P V+YVIPGNDD++R+I L+ D +A +G Sbjct: 181 IPVFAIVDTNASPAGVNYVIPGNDDAARAIQLYLDAAVAAIKEG 224 >gi|167465703|ref|ZP_02330792.1| 30S ribosomal protein S2 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 222 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 101/230 (43%), Positives = 153/230 (66%), Gaps = 11/230 (4%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + G ILFV Sbjct: 1 EAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSLAEENGTILFV 60 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF-- 130 TK QA D V E A+R + +N +WLGG +TN++T+ + I +LR+LE++ +E+ F Sbjct: 61 GTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFQTIQKRINRLRELEKM--EEDGTFDL 118 Query: 131 -TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE + + +++D+L++ L GI+ M GLP +FV+D +E++A+ EAR+L IPIV +VD Sbjct: 119 LPKKEVILLRKEKDRLEKFLGGIKGMKGLPSALFVIDPRKERIAVAEARKLGIPIVGIVD 178 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 TN +PD +DYVIPGNDD+ R++ L +A A I+ S+ G +T + Sbjct: 179 TNCDPDEIDYVIPGNDDAIRAVKLLTAKMADAVIE------SHQGEETTA 222 >gi|320352942|ref|YP_004194281.1| 30S ribosomal protein S2P [Desulfobulbus propionicus DSM 2032] gi|320121444|gb|ADW16990.1| SSU ribosomal protein S2P [Desulfobulbus propionicus DSM 2032] Length = 258 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 154/228 (67%), Gaps = 9/228 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+G+ FGH+ WNPKM+ YI+ RN +I++L T+ + +KA + + V G Sbjct: 5 TMRQMLEAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDITMKLFKKAYGAMVEAVTNG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL---- 122 G +LFV TK Q + E A+R Y +N +WLGGM+TN++T+ S+ +L+ +E + Sbjct: 65 GSVLFVCTKRQGQAIIKEEAERCGMYYINHRWLGGMLTNFQTIKHSVDRLKKIESMQADG 124 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +N+ F KKE L +E++R KL R + GI++M LPD++FV+D +E +A+ EA +L Sbjct: 125 TINR----FPKKEVLQMEKERVKLDRNIGGIKNMRTLPDVLFVIDPKKEDIAVGEAVKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP++A+ DTN +PD ++YVIPGNDD+ R+I L ++A A ++G +R+ Sbjct: 181 IPVIALTDTNCDPDGINYVIPGNDDAIRAIKLISSMMAEAIMEGKSRR 228 >gi|225570245|ref|ZP_03779270.1| hypothetical protein CLOHYLEM_06341 [Clostridium hylemonae DSM 15053] gi|225161040|gb|EEG73659.1| hypothetical protein CLOHYLEM_06341 [Clostridium hylemonae DSM 15053] Length = 261 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q ISD A Sbjct: 16 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYQAISDIAAE 75 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + ++R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 76 GGSILFVGTKKQAQDAIKTESERCGMFYVNERWLGGMLTNFKTIKSRINRLKEIERM--S 133 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI++M PD +FVVD +E++ +QEA L I Sbjct: 134 EDGTFDVLPKKEVIQLKKEWEKLEKNLGGIKEMKKAPDAIFVVDPKKERICVQEAHTLGI 193 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 194 PLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 236 >gi|219870542|ref|YP_002474917.1| 30S ribosomal protein S2 [Haemophilus parasuis SH0165] gi|254764479|sp|B8F3R7|RS2_HAEPS RecName: Full=30S ribosomal protein S2 gi|219690746|gb|ACL31969.1| 30S ribosomal protein S2 [Haemophilus parasuis SH0165] Length = 241 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV FGH+ WNP+M+ YIF RN HII+L +T+P+ AL ++ Sbjct: 1 MAQVSMRDMLNAGVHFGHQTRYWNPQMKPYIFGARNGVHIINLEKTLPLFNDALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK ASD V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKILFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L+ R KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALDRTRDMAKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTN++P V++VIPGNDD++R+I L+ D +A +G Sbjct: 181 IPVFAIVDTNASPAGVNHVIPGNDDAARAIQLYLDAAVAAIKEG 224 >gi|229817673|ref|ZP_04447955.1| hypothetical protein BIFANG_02944 [Bifidobacterium angulatum DSM 20098] gi|229785462|gb|EEP21576.1| hypothetical protein BIFANG_02944 [Bifidobacterium angulatum DSM 20098] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 161/243 (66%), Gaps = 5/243 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ A I T Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDVAYDFIKST 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSAQATRVNMPYVSERWLGGMLTNFQTVSKRVARLKELEEV 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+MG P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMGRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ + G TK+ Sbjct: 181 GIPVVAIVDTNTDPEAVEYPIPANDDAIRGIELLTSLMADAVAEGLIERS---GKATKAE 237 Query: 241 GET 243 GE+ Sbjct: 238 GES 240 >gi|284107230|ref|ZP_06386371.1| Ribosomal protein S2 [Candidatus Poribacteria sp. WGA-A3] gi|283829977|gb|EFC34256.1| Ribosomal protein S2 [Candidatus Poribacteria sp. WGA-A3] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 148/221 (66%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I+ +LE+GV FGH+ WNPKM+ Y+F ERN ++IDL QT A + DTVA G Sbjct: 10 SIKDMLEAGVHFGHQTNRWNPKMKPYLFGERNGIYLIDLQQTAKFFFDAYNFVRDTVAAG 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA D V + A+R Y V +WLGGM+TN++T+ +SI +L+ LE + Sbjct: 70 ESVLFVGTKRQAVDIVEQEAQRCGMYYVTQRWLGGMLTNFETIKKSINQLKKLEAAQTDG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ KKE L +E++R KL++ L GI+ M GLP ++V+DT + + ++EA RL IP+V Sbjct: 130 THERLKKKEVLLMEKERGKLEKYLSGIKTMEGLPGCIYVLDTRIQHITVKEANRLGIPVV 189 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTN +P +D+ IPGNDD+ RS+ LF +A A ++G+ Sbjct: 190 AIVDTNCDPTRIDFPIPGNDDAIRSLKLFTARIADACLEGL 230 >gi|225573975|ref|ZP_03782620.1| hypothetical protein RUMHYD_02071 [Blautia hydrogenotrophica DSM 10507] gi|225038776|gb|EEG49022.1| hypothetical protein RUMHYD_02071 [Blautia hydrogenotrophica DSM 10507] Length = 259 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D VA Sbjct: 15 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADIVAD 74 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 75 GGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIGRLKEIEAM--- 131 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + + ++ KL++ L GI++M +PD +FVVD +E++ +QEA L Sbjct: 132 EADGTFDVLPKKEVIELRKEMAKLQKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHSLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 192 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 234 >gi|220927895|ref|YP_002504804.1| 30S ribosomal protein S2 [Clostridium cellulolyticum H10] gi|254764469|sp|B8I6D2|RS2_CLOCE RecName: Full=30S ribosomal protein S2 gi|219998223|gb|ACL74824.1| ribosomal protein S2 [Clostridium cellulolyticum H10] Length = 252 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + A I + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVDDAYFFIREIAMNG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D + E A+RS Q+ VN++WLGGM+TN+KT+++ I +L L + E Sbjct: 65 QDVLFVGTKKQAQDSIREEAERSGQFFVNNRWLGGMLTNFKTITKRINRLHQLNAM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE ++++ L++ L GI++M LP MFVVD +E+ AI EA+RL I Sbjct: 122 TDGTFEVLPKKEVSKLKKEMADLEKNLGGIKNMKKLPGAMFVVDPRKERNAILEAKRLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A I+G Sbjct: 182 PVVAIVDTNCDPDEVDFVIPGNDDAIRAVKLIAAKMADAVIEG 224 >gi|160880812|ref|YP_001559780.1| ribosomal protein S2 [Clostridium phytofermentans ISDg] gi|189044933|sp|A9KNC4|RS2_CLOPH RecName: Full=30S ribosomal protein S2 gi|160429478|gb|ABX43041.1| ribosomal protein S2 [Clostridium phytofermentans ISDg] Length = 246 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 149/221 (67%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A I D VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYYAIKDVVAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA D V A+R Y VN +WLGGM+TN+KT+ I++L+++E + N Sbjct: 64 GGKVLFVGTKKQAQDSVKSEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKEIETMAND 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++++ +KL++ L GI+DM +P+ +FVVD +E++ IQEA L + + Sbjct: 124 GTFEVLPKKEVIELKKEWEKLEKNLGGIKDMKEVPEAIFVVDPKKERICIQEAHNLGVKL 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ Sbjct: 184 IGIADTNCDPEELDHVIPGNDDAIRAVKLIVAKMADAVIEA 224 >gi|11467687|ref|NP_050739.1| ribosomal protein S2 [Guillardia theta] gi|6094137|sp|O78482|RR2_GUITH RecName: Full=30S ribosomal protein S2, chloroplastic gi|3603012|gb|AAC35673.1| ribosomal protein S2 [Guillardia theta] Length = 235 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 144/224 (64%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ +LLESGV FGH+ WNPKM YI+ ERN HIIDL QT +L +A + + + Sbjct: 3 ITLAELLESGVHFGHQARRWNPKMFPYIYAERNGIHIIDLVQTAQLLTEACEFVKKSAEE 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G + LFV TK QA+ + + A+R + +N +WLGG++TNW T+ +++L+DLE K Sbjct: 63 GKKFLFVGTKRQAASIIAQEAERCGAFYINQRWLGGILTNWFTIRTRVERLKDLEL---K 119 Query: 126 ENQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G+ KKE + R+ +KLKR L+GI++M LPDL+ +VD RE A+QE R L Sbjct: 120 EETGYLDKLPKKEAAGLRRELEKLKRNLNGIKNMKRLPDLVVIVDQKRETTAVQECRTLG 179 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI++++DTN NPDL D IPGNDD+ RSI L + + +G Sbjct: 180 IPIISILDTNCNPDLTDIAIPGNDDAIRSIKLIITKLTDSICEG 223 >gi|293115676|ref|ZP_05792588.2| ribosomal protein S2 [Butyrivibrio crossotus DSM 2876] gi|292808759|gb|EFF67964.1| ribosomal protein S2 [Butyrivibrio crossotus DSM 2876] Length = 275 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 148/222 (66%), Gaps = 7/222 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A I D A+ Sbjct: 29 ISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYNAIYDVAAQ 88 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + V A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 89 GGSILFVGTKKQAQEAVKTEAERCGMYYVNERWLGGMLTNFKTIQSRINRLKEIEAM--- 145 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++++KL++ L GI++M +PD +F+VD +E + +QEA L Sbjct: 146 EADGTFDVLPKKEVIQLKKEQEKLEKNLGGIKNMKRIPDAIFIVDPKKEAICVQEAHILG 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I Sbjct: 206 IPLIGIVDTNCDPEEIDYVIPGNDDAIRAVKLIVSKMADAVI 247 >gi|300088116|ref|YP_003758638.1| 30S ribosomal protein S2 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527849|gb|ADJ26317.1| ribosomal protein S2 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 257 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 99/217 (45%), Positives = 144/217 (66%), Gaps = 1/217 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LLESG FGH+ W+PKM++YIF +RN+ HIIDL +TV ML KAL I VA GG Sbjct: 8 IKELLESGAHFGHQTSRWHPKMKKYIFTKRNDIHIIDLDKTVVMLDKALDFIEQVVAEGG 67 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 +IL V TK QA + V + +KR Y +N +W+GG++TN+ + I L LE+ + E Sbjct: 68 KILVVGTKKQAQEIVADESKRGGMYYINQRWIGGILTNFAAIQNRIDYLVRLEDQHARGE 127 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE+L + ++ +L + + G ++M LPD++F+VD +EK+A+ EA+R+ IP+VA Sbjct: 128 LARLPKKEQLKLAKEMLRLNKMMGGFKEMTALPDVIFIVDPTKEKIALAEAQRMGIPVVA 187 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDTN NPD +DY IP NDD+ R+I L VA + Sbjct: 188 IVDTNCNPDGIDYPIPANDDAMRAIKLVLSKVADTVL 224 >gi|313677452|ref|YP_004055448.1| SSU ribosomal protein s2p [Marivirga tractuosa DSM 4126] gi|312944150|gb|ADR23340.1| SSU ribosomal protein S2P [Marivirga tractuosa DSM 4126] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 103/225 (45%), Positives = 149/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+GV FGH W+PKM YIF ERN HIIDL++T+ L +A I + Sbjct: 1 MAKLEYNDLLEAGVHFGHLTRKWDPKMAPYIFMERNGIHIIDLNKTLAALDEACHAIKNH 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFVATK QA D VME AKR V +W GGMMTN+ T+ +S++KL +++++ Sbjct: 61 VRSGKKVLFVATKKQAQDIVMEEAKRLNMPYVVDRWQGGMMTNFATIRKSLKKLANIDKM 120 Query: 123 LNKENQ-GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +E+ K+ERL I+R+++K++R L GI D+ LP +FV+D RE +AI+EA++L Sbjct: 121 QKEESYLNLAKRERLMIQREKEKMERVLGGIADLNRLPSALFVIDIKREHIAIKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+ A+VDTNS+P VDY IP NDD+ +SI+L A +G+ Sbjct: 181 IPVFAMVDTNSDPTQVDYPIPANDDAWKSISLILKSFGKAIEEGL 225 >gi|291288430|ref|YP_003505246.1| 30S ribosomal protein S2 [Denitrovibrio acetiphilus DSM 12809] gi|290885590|gb|ADD69290.1| ribosomal protein S2 [Denitrovibrio acetiphilus DSM 12809] Length = 269 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 98/237 (41%), Positives = 149/237 (62%), Gaps = 1/237 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ LLE+GV FGH+ WNPKM +Y+F RN +I+DL +TV A + D +G Sbjct: 5 SMKNLLEAGVHFGHQTKRWNPKMSKYVFGARNGIYILDLQKTVQCFNTAYEFTRDAARQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 LFV TK QA + + EAA + + +N +WLGG +TN++T+ IQ+L++LEE+ Sbjct: 65 STFLFVGTKKQAQEAIKEAANKCGAFYMNERWLGGTLTNFQTIKSRIQRLKELEEMFESG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +TKKE ++++ +KL + L GI+DM G+PD+MF++D E+ A+ EA++L IPI+ Sbjct: 125 YINKYTKKEASKLKKELEKLSKNLGGIKDMPGIPDVMFIIDIKMEQNAVAEAKKLDIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 A+VDTN +PDLVD IPGNDD+ R+ L +A A +G + M D + E Sbjct: 185 AIVDTNCDPDLVDLPIPGNDDAIRACQLISGRIADAIAEGKQMREEDMAGDMQQLAE 241 >gi|330836657|ref|YP_004411298.1| 30S ribosomal protein S2P [Spirochaeta coccoides DSM 17374] gi|329748560|gb|AEC01916.1| SSU ribosomal protein S2P [Spirochaeta coccoides DSM 17374] Length = 326 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 146/223 (65%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L T++ LLESGV FGH+ WNPKM +YIF ERN HIIDL +T + +A I Sbjct: 19 LSVVTMKSLLESGVHFGHQTKRWNPKMAKYIFQERNGIHIIDLQKTSACIIEAYDAIRAQ 78 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILF+ TK QA + A R VN++WLGGM+TN+ T+ +SI L+ +E++ Sbjct: 79 VRNGKSILFIGTKKQAQQTIESEANRCGMPYVNNRWLGGMLTNFTTIKKSIATLKKIEKM 138 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE + +++ KL++ L GI+DM LP +F++DT +E +A+ EA RL Sbjct: 139 EVDGTFDSLTKKEISLLTKEKTKLEKNLGGIKDMTSLPGAVFIIDTKKEAIAVAEANRLG 198 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP+VAVVDTN +P +DY IPGNDD+ R+I LF +++A+A +D Sbjct: 199 IPVVAVVDTNCDPTNIDYPIPGNDDAIRAIQLFTEIIANAVVD 241 >gi|301155644|emb|CBW15112.1| 30S ribosomal subunit protein S2 [Haemophilus parainfluenzae T3T1] Length = 240 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 151/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK A + V AA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAAQEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTNS VD+VIPGNDD++R+I L+ A+A +G Sbjct: 181 IPVFAIVDTNSTSAGVDFVIPGNDDATRAIQLYVSAAAAAVKEG 224 >gi|255280807|ref|ZP_05345362.1| ribosomal protein S2 [Bryantella formatexigens DSM 14469] gi|255268744|gb|EET61949.1| ribosomal protein S2 [Bryantella formatexigens DSM 14469] Length = 325 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 103/238 (43%), Positives = 151/238 (63%), Gaps = 10/238 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + D VA Sbjct: 78 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYNAVGDIVAN 137 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D V A+R + VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 138 GGTILFVGTKKQAQDAVKSEAERCGMFYVNERWLGGMLTNFKTIRSRIDRLKQIETM--- 194 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + + ++++KL + L GI++M +PD +FVVD +E++ +QEA L Sbjct: 195 EADGTFDVLPKKEVIALRKEKEKLNKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHTLG 254 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQHSYMGAD 236 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ G R + G D Sbjct: 255 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQGAERDVVFEGED 312 >gi|325685956|gb|EGD28019.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 253 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 5 SMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVAQDD 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ E Sbjct: 65 GVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L IP Sbjct: 123 DGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 183 VVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAIIEG 224 >gi|116513100|ref|YP_812007.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris SK11] gi|123025098|sp|Q02VX8|RS2_LACLS RecName: Full=30S ribosomal protein S2 gi|116108754|gb|ABJ73894.1| SSU ribosomal protein S2P [Lactococcus lactis subsp. cremoris SK11] Length = 255 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 152/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN H+IDL +T ++ A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIHVIDLQKTEKLVDDAYNYVKNASQE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA++ V E A R+ QY VN +WLGGM+TNW T+ + +L+++ ++ Sbjct: 64 GAVVLFVGTKKQAAEAVKEEALRAGQYYVNHRWLGGMLTNWNTIQTRVTRLKEINKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + + ++R++L++ + GI DM +PD+M++VD + E++A++EA+ L Sbjct: 121 EEEGTFEVLPKKEVVLLNKERERLEKFIGGIADMPRIPDVMYIVDPHAEQIAVKEAKTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++P+ +D VIP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPEPIDVVIPANDDAIRAVKLITAKMADAIIEG 224 >gi|57234832|ref|YP_181123.1| 30S ribosomal protein S2 [Dehalococcoides ethenogenes 195] gi|123759724|sp|Q3Z9H6|RS2_DEHE1 RecName: Full=30S ribosomal protein S2 gi|57225280|gb|AAW40337.1| ribosomal protein S2 [Dehalococcoides ethenogenes 195] Length = 245 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 154/241 (63%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LLE+G FGH+ W+P+M++YIF +RN HIIDL +TV ML KA I+ Sbjct: 1 MPTTNIKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ GG++LFV TK QA + + E AKR Y +N +W GG++TN+ ++ I L LE+ Sbjct: 61 VSEGGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQ 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +L R + G ++M LPD++FVVD +EK+A+ EA+R+ Sbjct: 121 QARGDFNRLPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKIAMAEAKRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P+VA+VDTN NPD VDY IP NDD+ R+I L C +A + I+ Q++ + ++ G Sbjct: 181 VPLVAMVDTNCNPDEVDYPIPSNDDAMRAIKLICSKMADSVIEA---QNALKVTEVETTG 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|311114691|ref|YP_003985912.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14019] gi|310946185|gb|ADP38889.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14019] Length = 266 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 112/265 (42%), Positives = 173/265 (65%), Gaps = 8/265 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS +++L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVSERWLGGMLTNFQTVSTRVKRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI----ARQHSYMGAD 236 IP+VA+VDTN++PD V+Y IP NDD+ R + L L+A A +G+ + G+D Sbjct: 181 GIPVVAIVDTNTDPDSVEYPIPANDDAIRGVELLTSLMADAVAEGLLERAGKGAKSEGSD 240 Query: 237 TK--SAGETVVHSKEGMQLEEDSQS 259 + +A E + +KE Q E+++++ Sbjct: 241 AQPMAAWEKELLTKETEQSEDEAKA 265 >gi|283795416|ref|ZP_06344569.1| ribosomal protein S2 [Clostridium sp. M62/1] gi|291077074|gb|EFE14438.1| ribosomal protein S2 [Clostridium sp. M62/1] gi|295091107|emb|CBK77214.1| SSU ribosomal protein S2P [Clostridium cf. saccharolyticum K10] Length = 250 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 151/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V + +A + +SD A Sbjct: 9 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGKVDEAYKAVSDIAAE 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 69 GGTILFVGTKKQAQEAIRVEAERCGMFYVNERWLGGMLTNFKTIQSRINRLKEIETM--A 126 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ +QEA L I Sbjct: 127 EDGTFDVLPKKEVIALKKEWEKLEKNLGGIKEMKRIPDAIFVVDPKKERICVQEAHTLGI 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 187 PLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSRMADAVIEA 229 >gi|51598386|ref|YP_072574.1| 30S ribosomal protein S2 [Borrelia garinii PBi] gi|61215485|sp|Q662N9|RS2_BORGA RecName: Full=30S ribosomal protein S2 gi|51572957|gb|AAU06982.1| ribosomal protein S2 [Borrelia garinii PBi] Length = 262 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 96/220 (43%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKFKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|154148854|ref|YP_001406404.1| 30S ribosomal protein S2 [Campylobacter hominis ATCC BAA-381] gi|166225255|sp|A7I1L3|RS2_CAMHC RecName: Full=30S ribosomal protein S2 gi|153804863|gb|ABS51870.1| ribosomal protein S2 [Campylobacter hominis ATCC BAA-381] Length = 267 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 104/225 (46%), Positives = 149/225 (66%), Gaps = 7/225 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A G Sbjct: 3 TMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGM+TN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGAAIKEFAEKCEMPYVNHRWLGGMLTNFDTIKQSIRKLEVIEQM---E 119 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE ++ K+ KL+ L GIR+M LPD++FV+D +EK+A++EA RL + Sbjct: 120 TDGSMDLLTKKEAGMLKSKKAKLELYLGGIRNMKNLPDMVFVIDCVKEKIAVKEANRLGM 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P++A +DTN +PD+VD+ IPGNDD+ RSI LFC ++ A +G A Sbjct: 180 PVIAPLDTNCDPDVVDFPIPGNDDAIRSIQLFCQEMSEAINEGKA 224 >gi|203287588|ref|YP_002222603.1| 30S ribosomal protein S2 [Borrelia recurrentis A1] gi|238690583|sp|B5RQU8|RS2_BORRA RecName: Full=30S ribosomal protein S2 gi|201084808|gb|ACH94382.1| 30S ribosomal protein S2 [Borrelia recurrentis A1] Length = 254 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 97/220 (44%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSVIKN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEAKRSEMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE I R++ KL + L GI+DM LP +F++D RE++ I EAR+L I I Sbjct: 124 GTFEMISKKEVSQINREKLKLAKNLTGIKDMEELPGAIFIIDPKREQIVINEARKLGITI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +AVVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 IAVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|219684845|ref|ZP_03539787.1| ribosomal protein S2 [Borrelia garinii PBr] gi|219685281|ref|ZP_03540100.1| ribosomal protein S2 [Borrelia garinii Far04] gi|219671790|gb|EED28845.1| ribosomal protein S2 [Borrelia garinii PBr] gi|219673054|gb|EED30074.1| ribosomal protein S2 [Borrelia garinii Far04] Length = 262 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 157/221 (71%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKFKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILES 224 >gi|325262880|ref|ZP_08129616.1| ribosomal protein S2 [Clostridium sp. D5] gi|324031974|gb|EGB93253.1| ribosomal protein S2 [Clostridium sp. D5] Length = 252 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 150/222 (67%), Gaps = 5/222 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A Q ++D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYQAVADIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + ++R + VN +WLGGM+TN+KT+ +Q+L+D+E + Sbjct: 64 GGTILFVGTKKQAQDAIKTESERCGMFYVNERWLGGMLTNFKTIQSRVQRLKDIERM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ KL++ L GI++M +PD +F+VD +E++ +QEA L I Sbjct: 122 EDGTFDVLPKKEVIELKKEWAKLEKNLGGIKEMKRIPDAIFIVDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ Sbjct: 182 PLIGICDTNCDPEELDFVIPGNDDAIRAVKLIVSKMADAVIE 223 >gi|251771485|gb|EES52062.1| ribosomal protein S2 [Leptospirillum ferrodiazotrophum] Length = 255 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 150/235 (63%), Gaps = 2/235 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI++LL++GV FGH+ WNPKM+R+I+ ERN +IIDL QT ++A I V G Sbjct: 5 TIKELLDAGVHFGHQAKRWNPKMKRFIYGERNGIYIIDLQQTTRRYRQATAFIKKVVGEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LF+ATK QA V+E A+R + V +WLGGM+TN +T+ +S+ +L+ +E + + Sbjct: 65 KSVLFIATKKQAQSIVVEEAERCGMFHVTQRWLGGMLTNHQTIRKSVDRLKKIEAMKEGD 124 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 KKE +E++ KL+ L GIR M LP +FV+D +E +AI EA RL IP+V Sbjct: 125 QWARLPKKEIAQLEKEESKLRSTLSGIRGMSQLPGAVFVIDPKKEHIAIHEANRLGIPVV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID-GIARQHSYMGADTKS 239 A+VDTN +PDL+D+ IP NDD+ RSI L +A A I+ GI+R+ + D + Sbjct: 185 AMVDTNCDPDLIDFPIPANDDAIRSIRLIASGIADAVIEGGISRRSAQKAPDAAT 239 >gi|116491005|ref|YP_810549.1| SSU ribosomal protein S2P [Oenococcus oeni PSU-1] gi|290890485|ref|ZP_06553560.1| hypothetical protein AWRIB429_0950 [Oenococcus oeni AWRIB429] gi|122276813|sp|Q04F88|RS2_OENOB RecName: Full=30S ribosomal protein S2 gi|116091730|gb|ABJ56884.1| SSU ribosomal protein S2P [Oenococcus oeni PSU-1] gi|290479881|gb|EFD88530.1| hypothetical protein AWRIB429_0950 [Oenococcus oeni AWRIB429] Length = 260 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 110/263 (41%), Positives = 161/263 (61%), Gaps = 9/263 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+G FGH+ W+P+M+ YIF RN HIIDL +T+ M A + Sbjct: 1 MAAISMKELLEAGAHFGHQTRRWDPRMDEYIFTSRNGIHIIDLQKTLRMADDAYNWVKGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G LFV TK QA++ + E AKR+ VN +WLGG +TNW T+ I KL++L Sbjct: 61 AADGANFLFVGTKKQATEAIEEEAKRAGVAYVNHRWLGGTLTNWNTIKTRINKLKELRAA 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +E+ F KKE + +++ KL++ L GI DM +PD+MFVVD E++A++EAR Sbjct: 121 --EEDGSFDKLPKKEASQLGKQKAKLEKFLGGIADMEDIPDVMFVVDPKTEEIAVKEARS 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++DTN NPDLVD IP NDD+ R++ L +A A I+G RQ G D S Sbjct: 179 LNIPVVAMIDTNGNPDLVDVKIPANDDAIRAVKLITSKMADAIIEG--RQGQDAGED--S 234 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 A +T + +G E+S ++E+ Sbjct: 235 AEKTFADTADGEGDFEESSNNEN 257 >gi|119952925|ref|YP_945134.1| 30S ribosomal protein S2 [Borrelia turicatae 91E135] gi|254764459|sp|A1QYS2|RS2_BORT9 RecName: Full=30S ribosomal protein S2 gi|119861696|gb|AAX17464.1| SSU ribosomal protein S2P [Borrelia turicatae 91E135] Length = 254 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSVIKS 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKMEID 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE + R++ KL + L GI+DM LP +F++D RE++ I EAR+L IPI Sbjct: 124 GTFEMISKKEVSQLNREKLKLSKNLTGIKDMEELPGAVFIIDPKREQIVINEARKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|302386230|ref|YP_003822052.1| ribosomal protein S2 [Clostridium saccharolyticum WM1] gi|302196858|gb|ADL04429.1| ribosomal protein S2 [Clostridium saccharolyticum WM1] Length = 246 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 150/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVVKVDEAYKAVSDIAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ + +L+ +E + Sbjct: 64 GGKILFVGTKKQAQDAIKSEAERCGMYFVNERWLGGMLTNFKTIQSRVARLKQIETM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ F KKE + ++++ +KL++ L GI+DM +PD +FVVD +E++ +QEA L I Sbjct: 122 QDGTFDVLPKKEVIALKKEWEKLEKNLGGIKDMKKIPDAIFVVDPKKERICVQEAHTLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ Sbjct: 182 PLIGIADTNCDPEELDFVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|216264087|ref|ZP_03436081.1| ribosomal protein S2 [Borrelia afzelii ACA-1] gi|215980131|gb|EEC20953.1| ribosomal protein S2 [Borrelia afzelii ACA-1] Length = 260 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKLKLAKNLSGIKDMETLPGAVFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|118586851|ref|ZP_01544285.1| 30S ribosomal protein S2 [Oenococcus oeni ATCC BAA-1163] gi|118432683|gb|EAV39415.1| 30S ribosomal protein S2 [Oenococcus oeni ATCC BAA-1163] Length = 260 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 110/263 (41%), Positives = 161/263 (61%), Gaps = 9/263 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+G FGH+ W+P+M+ YIF RN HIIDL +T+ M A + Sbjct: 1 MAAISMKELLEAGAHFGHQTRRWDPRMDEYIFTSRNGIHIIDLQKTLRMADDAYNWVKGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G LFV TK QA++ + E AKR+ VN +WLGG +TNW T+ I KL++L Sbjct: 61 AADGANFLFVGTKKQATEAIEEEAKRAGVAYVNHRWLGGTLTNWNTIKTRINKLKELRAA 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +E+ F KKE + +++ KL++ L GI DM +PD+MFVVD E++A++EAR Sbjct: 121 --EEDGSFDKLPKKEASQLGKQKAKLEKFLGGIADMEDIPDVMFVVDPKTEEIAVKEART 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++DTN NPDLVD IP NDD+ R++ L +A A I+G RQ G D S Sbjct: 179 LNIPVVAMIDTNGNPDLVDVKIPANDDAIRAVKLITSKMADAIIEG--RQGQDAGED--S 234 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 A +T + +G E+S ++E+ Sbjct: 235 AEKTFADTADGEGDFEESSNNEN 257 >gi|325913955|ref|ZP_08176311.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937] gi|325539724|gb|EGD11364.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937] Length = 266 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 144/221 (65%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGHR WNPKM YIF R HII+L +TVP+ A+ +S + G Sbjct: 1 MRQMLEAGVHFGHRTCYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE + Sbjct: 61 TVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L IP++A Sbjct: 121 FEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 VVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 221 >gi|226227182|ref|YP_002761288.1| 30S ribosomal protein S2 [Gemmatimonas aurantiaca T-27] gi|226090373|dbj|BAH38818.1| 30S ribosomal protein S2 [Gemmatimonas aurantiaca T-27] Length = 320 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 152/222 (68%), Gaps = 6/222 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+ P ++ QLL +GV FGH+ WNPKM R+IF ERN HIIDL +T+ ++ A +++ Sbjct: 1 MSTP--SLEQLLAAGVHFGHQTRRWNPKMRRFIFAERNGIHIIDLQKTLRQIELAQKLVR 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + V RG +LFV TK Q + V A+R V +WLGGM+TN++TV + ++KL++L Sbjct: 59 EVVLRGENVLFVCTKRQLAAIVRNEAERCGAMFVTERWLGGMLTNYQTVKKQVKKLKEL- 117 Query: 121 ELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E ++E GF TKKE+L + R+RDKL + L GI+ M LP L+F++D+ +E++A+ EA Sbjct: 118 EAGSEEGGGFTNYTKKEQLLMSRQRDKLSKYLSGIKSMHRLPGLLFIIDSKKERIAVSEA 177 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +L +PIVA+VDTN++PDL+ I GNDD+ RS+ L +VA Sbjct: 178 NKLGVPIVAIVDTNADPDLITVPIAGNDDAIRSVELIAKVVA 219 >gi|224531751|ref|ZP_03672383.1| ribosomal protein S2 [Borrelia valaisiana VS116] gi|224511216|gb|EEF81622.1| ribosomal protein S2 [Borrelia valaisiana VS116] Length = 262 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKLKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|183601692|ref|ZP_02963062.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis HN019] gi|219683775|ref|YP_002470158.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis AD011] gi|241190809|ref|YP_002968203.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196215|ref|YP_002969770.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254764457|sp|B8DUA3|RS2_BIFA0 RecName: Full=30S ribosomal protein S2 gi|183219298|gb|EDT89939.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis HN019] gi|219621425|gb|ACL29582.1| ribosomal protein S2 [Bifidobacterium animalis subsp. lactis AD011] gi|240249201|gb|ACS46141.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250769|gb|ACS47708.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178548|gb|ADC85794.1| SSU ribosomal protein S2P [Bifidobacterium animalis subsp. lactis BB-12] gi|295793798|gb|ADG33333.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis V9] Length = 303 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 113/271 (41%), Positives = 174/271 (64%), Gaps = 3/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+QFGH+ WNPKM++YI ERN +II+L +T+ ++ A I T Sbjct: 1 MAQITMSEMLKAGLQFGHQTRRWNPKMKQYILTERNGIYIINLFKTLDLIDVAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA G +LFV TK QA + + AA R V+ +WLGGM+TN++TVS+ + +L++LE Sbjct: 61 VAHNGTVLFVGTKKQAQEAIKNAATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELETM 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L ++R++DKL+R L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFDDVHGSGLTKKELLLLKREKDKLERQLGGIRNMTRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP+VA+VDTN++P+ V+Y IP NDD+ R I L +L A A +G + R + +++ S Sbjct: 181 GIPVVAIVDTNADPEAVEYPIPANDDAIRGIELLTNLFADAVAEGLLERSGNASKSESNS 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 KE ++ E + E++V+ EV Sbjct: 241 EQPMAAWEKELLEKNEKATLRENAVVTENEV 271 >gi|328948076|ref|YP_004365413.1| ribosomal protein S2 [Treponema succinifaciens DSM 2489] gi|328448400|gb|AEB14116.1| ribosomal protein S2 [Treponema succinifaciens DSM 2489] Length = 288 Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 92/220 (41%), Positives = 152/220 (69%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ ++ + V+ + G Sbjct: 5 TMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTITAIKDSYDVVRKVASSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + + A+R Y VN++WLGG +TN+ T+ +S+ +L+ +E++ ++ Sbjct: 65 KSVLFVGTKKQAQQAIAKEAERCGMYYVNNRWLGGTLTNFTTIKKSLLRLKKIEKMEVDG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKE ++++ L + G++DM LP +F++DT++E++A+ EARR+ IPI+ Sbjct: 125 TFDKLTKKEVAAYMKEKETLTKNYGGMKDMKELPGAVFIIDTHKEQIAVAEARRMGIPII 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTN NP+ ++Y IPGNDD+ R+I+LF ++A+A I+ Sbjct: 185 AIVDTNCNPEGINYPIPGNDDAIRAISLFTSIIANAVIEA 224 >gi|270307750|ref|YP_003329808.1| ribosomal protein S2 [Dehalococcoides sp. VS] gi|270153642|gb|ACZ61480.1| ribosomal protein S2 [Dehalococcoides sp. VS] Length = 245 Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 154/241 (63%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LLE+G FGH+ W+P+M++YIF +RN HIIDL +TV ML KA I+ Sbjct: 1 MPTTNIKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ GG++LFV TK QA + + E AKR Y +N +W GG++TN+ ++ I L LE+ Sbjct: 61 VSDGGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQ 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +L R + G ++M LPD++FVVD +EK+A+ EA+R+ Sbjct: 121 QARGDFNRLPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKIAMAEAKRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P+VA+VDTN NPD VDY IP NDD+ R+I L C +A + I+ Q++ + ++ G Sbjct: 181 VPLVAMVDTNCNPDEVDYPIPSNDDAMRAIKLICSKMADSVIEA---QNALKVTEVETTG 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|15806525|ref|NP_295236.1| 30S ribosomal protein S2 [Deinococcus radiodurans R1] gi|25009228|sp|Q9RU79|RS2_DEIRA RecName: Full=30S ribosomal protein S2 gi|6459276|gb|AAF11080.1|AE001995_5 ribosomal protein S2 [Deinococcus radiodurans R1] Length = 264 Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 106/263 (40%), Positives = 159/263 (60%), Gaps = 7/263 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH WNPK +++IF ERN IIDL +T+ + ++ I D RG Sbjct: 5 SMKQLLEAGVHFGHETKRWNPKFKKFIFAERNGIFIIDLQKTLKQVDRSFDYIKDLAERG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R+ V S+WLGGM+TN+KT+ I +L +L++L E Sbjct: 65 GVILFVGTKKQAQEIVELEARRTGMPYVTSRWLGGMLTNFKTMRTRIDRLNELDDLFESE 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 K ER+ + +R++L R + GIR M LPD +FVVD +E +A+QEA +L IP++ Sbjct: 125 RINDRPKAERIQLASERERLLRFVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A+ DT+S+PD++DY++PGNDD+ RSI L V ++ + G + SAG Sbjct: 185 ALADTDSDPDVIDYIVPGNDDAIRSIQLITHRVGDLLVE------ARGGHEDVSAGPVEE 238 Query: 246 HSKEGMQLEEDSQSSESSVLDGQ 268 S E E+ ++ + + Q Sbjct: 239 QSDEAQAAEQGTEGDTAQLTSSQ 261 >gi|326204051|ref|ZP_08193912.1| ribosomal protein S2 [Clostridium papyrosolvens DSM 2782] gi|325985818|gb|EGD46653.1| ribosomal protein S2 [Clostridium papyrosolvens DSM 2782] Length = 252 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + A I + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVDDAYFFIREVAMNG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA D + E A+RS Q+ VN++WLGGM+TN+KT+++ I +L L + E Sbjct: 65 QDVLFVGTKKQAQDSIKEEAERSGQFFVNNRWLGGMLTNFKTITKRINRLNQLTAM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE ++++ L++ L GI++M LP MFVVD +E+ AI EA+RL I Sbjct: 122 ADGTFDVLPKKEVSKLKKEMADLEKNLGGIKNMKKLPGAMFVVDPRKERNAILEAKRLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A I+G Sbjct: 182 PVVAIVDTNCDPDEVDFVIPGNDDAIRAVKLIAAKMADAVIEG 224 >gi|209573727|sp|Q0SP41|RS2_BORAP RecName: Full=30S ribosomal protein S2 Length = 262 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKLKLAKNLSGIKDMETLPGAVFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 223 >gi|303228534|ref|ZP_07315362.1| ribosomal protein S2 [Veillonella atypica ACS-134-V-Col7a] gi|302516781|gb|EFL58695.1| ribosomal protein S2 [Veillonella atypica ACS-134-V-Col7a] Length = 239 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + ++G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREVASQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + E Sbjct: 65 EVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L IP Sbjct: 123 DGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA VDTN +PD V++ IP NDD+ R++ L +A A ++G Sbjct: 183 VVATVDTNCDPDEVEFPIPANDDAIRAVKLLAGKMADAVLEG 224 >gi|315271282|gb|ACO46255.2| putative 30S ribosomal protein S2 [Deinococcus deserti VCD115] Length = 251 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 108/245 (44%), Positives = 154/245 (62%), Gaps = 7/245 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D RG Sbjct: 5 SMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQVDRSFDYIKDLSERG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R+ V S+WLGGM+TN+KT+ I +L +L+EL Sbjct: 65 GVILFVGTKKQAQEIVELEARRTGMPFVTSRWLGGMLTNFKTMRTRIDRLTELDELFESG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 K ER+ + +R++L+R + GIR M LPD +FVVD +E +A+QEA +L IP++ Sbjct: 125 RINDRLKAERIKLGAERERLQRFVGGIRKMTRLPDAIFVVDPTKEVIAVQEANKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFC----DLVASAAIDG--IARQHSYMGADTKS 239 A+ DT+S+PD++DY++PGNDD+ RSI L DL+ A G +A + GA T Sbjct: 185 ALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLLVEARGGGEDVAAEGMEQGAQTDE 244 Query: 240 AGETV 244 E V Sbjct: 245 QAEEV 249 >gi|226356269|ref|YP_002786009.1| 30S ribosomal protein S2 [Deinococcus deserti VCD115] gi|259494993|sp|C1CVN8|RS2_DEIDV RecName: Full=30S ribosomal protein S2 Length = 252 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 108/245 (44%), Positives = 154/245 (62%), Gaps = 7/245 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D RG Sbjct: 6 SMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQVDRSFDYIKDLSERG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R+ V S+WLGGM+TN+KT+ I +L +L+EL Sbjct: 66 GVILFVGTKKQAQEIVELEARRTGMPFVTSRWLGGMLTNFKTMRTRIDRLTELDELFESG 125 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 K ER+ + +R++L+R + GIR M LPD +FVVD +E +A+QEA +L IP++ Sbjct: 126 RINDRLKAERIKLGAERERLQRFVGGIRKMTRLPDAIFVVDPTKEVIAVQEANKLGIPVI 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFC----DLVASAAIDG--IARQHSYMGADTKS 239 A+ DT+S+PD++DY++PGNDD+ RSI L DL+ A G +A + GA T Sbjct: 186 ALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLLVEARGGGEDVAAEGMEQGAQTDE 245 Query: 240 AGETV 244 E V Sbjct: 246 QAEEV 250 >gi|238019369|ref|ZP_04599795.1| hypothetical protein VEIDISOL_01233 [Veillonella dispar ATCC 17748] gi|237864068|gb|EEP65358.1| hypothetical protein VEIDISOL_01233 [Veillonella dispar ATCC 17748] Length = 237 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + ++G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREVASQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + E Sbjct: 65 EVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L IP Sbjct: 123 DGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA VDTN +PD V++ IP NDD+ R++ L +A A ++G Sbjct: 183 VVATVDTNCDPDEVEFPIPANDDAIRAVKLLAGKMADAVLEG 224 >gi|296875635|ref|ZP_06899705.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 15912] gi|296433365|gb|EFH19142.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 15912] Length = 260 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 109/248 (43%), Positives = 164/248 (66%), Gaps = 11/248 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVILFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G RQ G D+ + E Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG--RQ----GEDSVATVE 235 Query: 243 TVVHSKEG 250 + + EG Sbjct: 236 AELAATEG 243 >gi|206895757|ref|YP_002247086.1| ribosomal protein S2 [Coprothermobacter proteolyticus DSM 5265] gi|238054499|sp|B5Y8I9|RS2_COPPD RecName: Full=30S ribosomal protein S2 gi|206738374|gb|ACI17452.1| ribosomal protein S2 [Coprothermobacter proteolyticus DSM 5265] Length = 268 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 148/223 (66%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM+ +I+ ERN +IIDL +T L+ A + D G Sbjct: 5 TLKQLLEAGVHFGHQTRRWNPKMKPFIYAERNGIYIIDLQKTYEQLEAAYSFVRDASKEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA + + E A+R+ VN +W+GG +TN++T+ I+K + ELL Sbjct: 65 KTVLFVGTKRQAQEPIREEAERAGMPYVNQRWIGGFLTNFRTIRTRIKKYK---ELLALR 121 Query: 127 NQGFTK----KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 QG+ + KE+ + R+ +KL + G++DM LPD++FVVDT +E+ AI+EA+++ I Sbjct: 122 EQGYIESLDYKEQKRVMRELEKLDKYYSGVKDMDTLPDILFVVDTKKEEAAIREAKKIGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA++DTN +PDLVDY IP NDD+ R+I L +A A ++G Sbjct: 182 PVVAMIDTNCDPDLVDYPIPANDDAVRAIKLITSKIADAILEG 224 >gi|329120948|ref|ZP_08249579.1| 30S ribosomal protein S2 [Dialister micraerophilus DSM 19965] gi|327471110|gb|EGF16564.1| 30S ribosomal protein S2 [Dialister micraerophilus DSM 19965] Length = 278 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 150/218 (68%), Gaps = 1/218 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A I + A G Sbjct: 30 SMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKVEEAYNFIREVAANG 89 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + + A R + VN +WLGGM+TN++T+ + +L++LE++ Sbjct: 90 QTILFVGTKKQAQNAIKDEALRCNMFYVNQRWLGGMLTNFRTIQNRVARLKELEKMFEDG 149 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + KKE + ++R+ DKL++ L GI+DM LP + V+D+ +E++A++EAR+L IP++ Sbjct: 150 TVEQYPKKEVILMKRELDKLEKNLGGIKDMKKLPGCIVVIDSKKEEIAVKEARKLNIPVI 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A VDTN +PD++D+ IP NDD+ R++ L +A A + Sbjct: 210 ATVDTNCDPDVIDFPIPANDDAIRAVKLLASKMADAVL 247 >gi|306820321|ref|ZP_07453960.1| 30S ribosomal protein S2 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551650|gb|EFM39602.1| 30S ribosomal protein S2 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 259 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 151/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV L++A +++ A Sbjct: 14 ISMKQLLEAGVHFGHQTRRWNPKMAKFIFAERNGIYIIDLQKTVKKLEEAYNFMTEVAAT 73 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA D + + A R+ Y VN +WLGGM+TN+KT+ I +L +LE + + Sbjct: 74 GKPILFVGTKKQAQDAIKDEALRAGMYYVNERWLGGMLTNYKTIKTRINRLVELERM--Q 131 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + + ++++KL++ L GI++M LP MFV+D +E++A+ EA +L I Sbjct: 132 EDGTFDKLPKKEVIGLLQEKEKLEKNLGGIKEMPELPVAMFVIDPKKERIAVLEAHKLGI 191 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ VVDTN +PD +D+ IPGNDD+ R++ L ++ A I+ Sbjct: 192 PVIGVVDTNCDPDEIDFPIPGNDDAIRAVKLIVSAMSQAIIEA 234 >gi|227872261|ref|ZP_03990620.1| ribosomal protein S2 [Oribacterium sinus F0268] gi|227841873|gb|EEJ52144.1| ribosomal protein S2 [Oribacterium sinus F0268] Length = 247 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 146/221 (66%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL +TV ++ + +S VA GG Sbjct: 6 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKTVKLVDDSYNALSQIVANGG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D V A R ++ VN +WLGGM+TN+KT+ IQ+L+D+E++ E+ Sbjct: 66 TILFVGTKKQAQDAVKAEALRCGEFYVNERWLGGMLTNFKTIRSRIQRLKDIEKM--AED 123 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE ++++ KL+ L GI+DM +PD +FV+D +EK+ +QEA L I + Sbjct: 124 GTFDVLPKKEVTLLKKEWAKLEANLGGIKDMKSIPDAIFVIDPKKEKICVQEAHSLGITL 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN++P+ +DY+IPGNDD+ R+I L +A A I+ Sbjct: 184 FGIADTNADPEELDYIIPGNDDAIRAIKLIVAKMADAVIEA 224 >gi|291456897|ref|ZP_06596287.1| ribosomal protein S2 [Bifidobacterium breve DSM 20213] gi|291382174|gb|EFE89692.1| ribosomal protein S2 [Bifidobacterium breve DSM 20213] Length = 292 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 108/243 (44%), Positives = 160/243 (65%), Gaps = 5/243 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 14 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 73 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 74 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 133 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 134 DFSDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKESLAVEEAHKL 193 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + G K+ Sbjct: 194 GIPVVALVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERS---GQAAKAE 250 Query: 241 GET 243 GET Sbjct: 251 GET 253 >gi|268315585|ref|YP_003289304.1| 30S ribosomal protein S2 [Rhodothermus marinus DSM 4252] gi|262333119|gb|ACY46916.1| ribosomal protein S2 [Rhodothermus marinus DSM 4252] Length = 276 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 111/242 (45%), Positives = 153/242 (63%), Gaps = 8/242 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I +LL++G FGH WNPKM +IF ERN HIIDL QT +L +A + + Sbjct: 18 RVSIEELLKAGAHFGHLTSRWNPKMRPFIFMERNGIHIIDLVQTQQLLDRAAEAAARFAR 77 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G +ILFV TK QA D V + A+ Q V +WLGG +TN++T+ QSI R +EEL Sbjct: 78 QGKKILFVGTKKQARDIVRKYAEACGQPYVVERWLGGTLTNFQTIRQSI---RRMEELAR 134 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G KKERL R+R+KL+R L GI M LP +F+VD RE +A+ EAR+L Sbjct: 135 MEEEGILDQLKKKERLMKRREREKLERTLGGIAQMAKLPGALFIVDVVREHIAVSEARKL 194 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A+VDTN++P+L+DY IP NDD+ RSI L ++A+A +G A+Q A K+ Sbjct: 195 GIPIIAIVDTNADPELIDYPIPANDDAVRSIELITSVIANAITEG-AKQREQEEASRKAE 253 Query: 241 GE 242 E Sbjct: 254 RE 255 >gi|313891960|ref|ZP_07825561.1| ribosomal protein S2 [Dialister microaerophilus UPII 345-E] gi|313119603|gb|EFR42794.1| ribosomal protein S2 [Dialister microaerophilus UPII 345-E] Length = 253 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 150/218 (68%), Gaps = 1/218 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A I + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKVEEAYNFIREVAANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + + A R + VN +WLGGM+TN++T+ + +L++LE++ Sbjct: 65 QTILFVGTKKQAQNAIKDEALRCNMFYVNQRWLGGMLTNFRTIQNRVARLKELEKMFEDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + KKE + ++R+ DKL++ L GI+DM LP + V+D+ +E++A++EAR+L IP++ Sbjct: 125 TVEQYPKKEVILMKRELDKLEKNLGGIKDMKKLPGCIVVIDSKKEEIAVKEARKLNIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A VDTN +PD++D+ IP NDD+ R++ L +A A + Sbjct: 185 ATVDTNCDPDVIDFPIPANDDAIRAVKLLASKMADAVL 222 >gi|269216058|ref|ZP_06159912.1| ribosomal protein S2 [Slackia exigua ATCC 700122] gi|269130317|gb|EEZ61395.1| ribosomal protein S2 [Slackia exigua ATCC 700122] Length = 262 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 106/227 (46%), Positives = 146/227 (64%), Gaps = 7/227 (3%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ + I+ LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L A +S Sbjct: 4 AMTKVGIKTLLDAGAHFGHQTRRWNPKMKPYIFGHRGDIYIIDLKQTLVGLDNAYTFVSK 63 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 T ++GG ILFV TK QA + + A R VNS+WLGGM+TN+ T+ +++ +EE Sbjct: 64 TASKGGTILFVGTKKQAQESIATQADRCGMPYVNSRWLGGMLTNFVTIRSRVKR---MEE 120 Query: 122 LLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 L KE G KKE+ + ++ KL+ L+GIR+M LPD +FVVDTNRE+LAI EA Sbjct: 121 LEAKEADGTMALLPKKEQTLLRKELAKLQTNLNGIRNMAKLPDAIFVVDTNREQLAIHEA 180 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +RL IP+V +DTN +PD V+Y IP NDD+ RS+ L VA A +D Sbjct: 181 KRLGIPVVGTLDTNCDPDDVEYGIPANDDAIRSVNLLSTFVADAIVD 227 >gi|254422433|ref|ZP_05036151.1| ribosomal protein S2 [Synechococcus sp. PCC 7335] gi|196189922|gb|EDX84886.1| ribosomal protein S2 [Synechococcus sp. PCC 7335] Length = 273 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 149/242 (61%), Gaps = 7/242 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LLESGV FGH+ WNPKM+ YIF RN HIIDL QT +L++A Q + + Sbjct: 1 MPVVSLSDLLESGVHFGHQTRRWNPKMDEYIFTSRNGVHIIDLVQTATLLEEAYQYVLKS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA+ V + A R Y VN +WLGGM+TNW T+ + +L+DLE + Sbjct: 61 AESGKSFLFVGTKRQAAGIVAQEASRCGSYYVNQRWLGGMLTNWSTIKTRVDRLKDLERM 120 Query: 123 LNKENQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE + R+ DKL++ L GI+ M +PD + +VD RE A+QE + Sbjct: 121 ---EQSGALAMRPKKEGSMLRRELDKLQKYLGGIKTMRRIPDAVIIVDVRREYNAVQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L +PI++++DTN +PD+VD IPGNDD+ R+I L +A A +G ++ G+ T Sbjct: 178 KLGLPIISLLDTNCDPDVVDVPIPGNDDAIRAIKLVIGRLADAIYEGSTGGNTASGSGTA 237 Query: 239 SA 240 SA Sbjct: 238 SA 239 >gi|194246627|ref|YP_002004266.1| 30S ribosomal protein S2 [Candidatus Phytoplasma mali] gi|193806984|emb|CAP18419.1| 30S ribosomal protein S2 [Candidatus Phytoplasma mali] Length = 244 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 102/219 (46%), Positives = 142/219 (64%), Gaps = 7/219 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI+QLLESG+ FGH WNPKM++YIF RN HIIDL +TV ++KA Q + A G Sbjct: 6 TIKQLLESGIHFGHITRKWNPKMKQYIFTSRNGIHIIDLKKTVEKIEKAYQELQKIAATG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILF+ATK Q + + E A+ + QY V +WLGG TN+KT++Q I L +L +E Sbjct: 66 GKILFLATKKQIKNIIKEEAQDAQQYYVIQRWLGGTFTNFKTITQRI---NLLHQLYKQE 122 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + +KR+KL++ L GI++M LP +F+VD +E +A+ EA +L I Sbjct: 123 KDGLWKKLPKKEVSKLMQKREKLEKFLGGIKNMKTLPQAIFIVDPQKEIIAVYEAAKLGI 182 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 I +VDTN +PDLVDY+IP NDD+ R + L ++A A Sbjct: 183 KIFGIVDTNCDPDLVDYIIPANDDAIRGVKLITSIIAKA 221 >gi|223940224|ref|ZP_03632084.1| ribosomal protein S2 [bacterium Ellin514] gi|223891111|gb|EEF57612.1| ribosomal protein S2 [bacterium Ellin514] Length = 257 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 101/216 (46%), Positives = 144/216 (66%), Gaps = 7/216 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH+ WNPKM+ +IF RN HIIDLS+T+ LQ A ++ TV++GG Sbjct: 7 VKELLEAGVHFGHQTKRWNPKMKPFIFDARNGIHIIDLSKTLAGLQAACDFLTTTVSKGG 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA + V E AK Q+ V +WLGG +TN++TV +SI +++ +E++ E Sbjct: 67 RVLFVGTKKQAQEAVKETAKECGQFFVTERWLGGTLTNFQTVKKSIARMKQIEKM---ET 123 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G + K+E+ I R+ + + DGIR M P MF+VD RE A+ EARRL IP Sbjct: 124 DGGINQYVKQEQSAIRREHARQFKYFDGIRSMDKYPAAMFLVDIKREHNAVAEARRLNIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +VA+VDTN +PDLVD+ I GNDD+ RS+ + + V Sbjct: 184 VVALVDTNCDPDLVDFPIAGNDDAIRSVRMVLNTVG 219 >gi|85057834|ref|YP_456750.1| 30S ribosomal protein S2 [Aster yellows witches'-broom phytoplasma AYWB] gi|123738891|sp|Q2NIS2|RS2_AYWBP RecName: Full=30S ribosomal protein S2 gi|84789939|gb|ABC65671.1| SSU ribosomal protein S2P [Aster yellows witches'-broom phytoplasma AYWB] Length = 269 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 146/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T +QLLESGV FGH WNPKM+ YIF RN HII+L +T ++KA Q + + + G Sbjct: 5 TTKQLLESGVYFGHATRKWNPKMKPYIFTSRNGIHIINLKKTSEEIEKAYQELLNIITSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ LF+ TK Q + E A+RS QY V+ +WLGG +TN+KT+ + I+ L L + +E Sbjct: 65 GKALFLGTKKQIQSSIREEAQRSQQYYVDHRWLGGTLTNFKTILKRIELLHLLHK---QE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + ++RKRDKL++ L GI+DM LP +F+ D +E +A+ EAR+L I Sbjct: 122 EEGLWKKLPKKEVVKLKRKRDKLEKFLGGIKDMKNLPQAIFIFDPEKESIAVAEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PDLVDY+IP NDD+ R + L L+A+A + G Sbjct: 182 KVFGIVDTNCDPDLVDYIIPANDDAIRGVKLIIWLMANACVQG 224 >gi|303232199|ref|ZP_07318902.1| ribosomal protein S2 [Veillonella atypica ACS-049-V-Sch6] gi|302513305|gb|EFL55344.1| ribosomal protein S2 [Veillonella atypica ACS-049-V-Sch6] Length = 250 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + ++G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREVASQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + E Sbjct: 65 EVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L IP Sbjct: 123 DGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA VDTN +PD V++ IP NDD+ R++ L +A A ++G Sbjct: 183 VVATVDTNCDPDEVEFPIPANDDAIRAVKLLAGKMADAVLEG 224 >gi|299144036|ref|ZP_07037116.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518521|gb|EFI42260.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 249 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 152/222 (68%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM R+IF +RN +IIDL +TV + +A + I + + GG Sbjct: 1 MKNLLEAGVHFGHQTRRWNPKMSRFIFTQRNGIYIIDLQKTVKKVDEAYEFIRELSSEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK QA D V + AK+ +N +WLGG++TN+KT+ + I +L++L E+ E Sbjct: 61 KILFVGTKKQAQDAVEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLQELTEM---ET 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KKE + + +R++L++ L GI+DM +PD +F+VD +E++A++EA L IP Sbjct: 118 DGTFDVLPKKEVIQLRHERERLEKFLGGIKDMDRVPDALFIVDPRKERIAVKEAHILGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V +VDTN +PD +D+ IPGNDD+ R++ L + +++A ++G Sbjct: 178 VVGIVDTNCDPDEIDFPIPGNDDAIRAVKLITETISNAVLEG 219 >gi|320527479|ref|ZP_08028660.1| ribosomal protein S2 [Solobacterium moorei F0204] gi|320132192|gb|EFW24741.1| ribosomal protein S2 [Solobacterium moorei F0204] Length = 316 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/220 (44%), Positives = 151/220 (68%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+GV FGH+ WNPKM+++I+ +N +IIDL++T L+ A + G Sbjct: 5 SMRKMLENGVHFGHQTRKWNPKMKQFIYTAKNGVYIIDLAKTQAKLEVAYNALKKIAEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 G+ILFV TK QA ++E A RS + +N +WLGG MTN++T+ +SI+KL ++EE+ N Sbjct: 65 GKILFVGTKKQAQATILEEALRSGSFYINQRWLGGTMTNFRTIQKSIKKLLEIEEMEANG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +TKKE+ + +K+++L+ L GI+ M LPD +FVVD E A+ EAR+L IP+ Sbjct: 125 QLAVYTKKEQAVLLQKKERLENFLGGIKGMKKLPDAIFVVDPLEEHNAVAEARKLNIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A++DTN++PDLVD+ IP NDD+ RSI L ++A A ++ Sbjct: 185 ALIDTNADPDLVDFPIPSNDDAVRSIKLMVSVIADAILEA 224 >gi|307720320|ref|YP_003891460.1| 30S ribosomal protein S2P [Sulfurimonas autotrophica DSM 16294] gi|306978413|gb|ADN08448.1| SSU ribosomal protein S2P [Sulfurimonas autotrophica DSM 16294] Length = 257 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 148/222 (66%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + ++ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 +LFV TK QA + V +AA V+++WLGGM+TN+ T+ +SI+KL + E+ N Sbjct: 63 KTVLFVGTKKQARNSVRDAAIACNMPYVDNRWLGGMLTNFPTIQKSIRKLDVITEMQENG 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L + RK+DKL++ GIR+M LPD++FVVD +E +A+ EAR L IP+V Sbjct: 123 QIDLLTKKEALMLSRKKDKLEQYFGGIRNMKKLPDMLFVVDAVKEHIAVLEARCLNIPVV 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 A +DTN +PDL+ Y IPGNDD+ RSI LFC + +A +G A Sbjct: 183 APLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTAAINEGKA 224 >gi|313888298|ref|ZP_07821969.1| ribosomal protein S2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845701|gb|EFR33091.1| ribosomal protein S2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 257 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLE+GV FGH+ WNPKM+R+IF ERN +IIDL +TV +++A + + A Sbjct: 4 ISMKSLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKVEEAYDFVREVAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA D + + A + +N +WLGG++TN+KT+ I++L L E+ + Sbjct: 64 GGEVLFVGTKKQAQDAIEKEATKCGMPYINQRWLGGLLTNYKTIKNRIERLYKLYEM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 EN F KKE + +R+KL++ L GI++M G+P +FVVD +E +A++EA L I Sbjct: 122 ENGTFDVLPKKEVAQLLHEREKLEKFLGGIKEMKGMPKALFVVDPKKENIAVKEAHILGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ +VDTN +P+ VD IPGNDD+ R++ L + +A+A I+G Sbjct: 182 PVIGIVDTNCDPEEVDIPIPGNDDAIRAVKLITETIANAVIEG 224 >gi|134299825|ref|YP_001113321.1| 30S ribosomal protein S2 [Desulfotomaculum reducens MI-1] gi|172044310|sp|A4J5Z3|RS2_DESRM RecName: Full=30S ribosomal protein S2 gi|134052525|gb|ABO50496.1| SSU ribosomal protein S2P [Desulfotomaculum reducens MI-1] Length = 232 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 148/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++ + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEECYDFVKQLAGEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +LFV TK QA + V E A+R + VN +WLGGM+TN++T+ I +L +LE + +E Sbjct: 65 GTLLFVGTKKQAQEAVKEEAERCGMFFVNQRWLGGMLTNFQTIRNRIDRLHELERM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + +++KL + L GI++M LP +FV+D +E++A+ EAR+L IP Sbjct: 123 DGTFEVLPKKEVAQLLHEKEKLDKFLGGIKNMRRLPGALFVIDPRKERIAVAEARKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKIADAILEG 224 >gi|312864417|ref|ZP_07724650.1| ribosomal protein S2 [Streptococcus downei F0415] gi|311100138|gb|EFQ58349.1| ribosomal protein S2 [Streptococcus downei F0415] Length = 257 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 155/221 (70%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 ILFV TK QA++ + E A R+ Q+ +N +WLGG +TNW T+ + I++L++++++ + Sbjct: 64 DAVILFVGTKKQAAEAIAEEATRAGQFYINHRWLGGTLTNWDTIQKRIRRLKEIKQMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L IP+ Sbjct: 124 GTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 184 VAMVDTNTDPDDIDVIIPANDDAIRAVKLITSKLADAIIEG 224 >gi|322377929|ref|ZP_08052417.1| ribosomal protein S2 [Streptococcus sp. M334] gi|321281105|gb|EFX58117.1| ribosomal protein S2 [Streptococcus sp. M334] Length = 259 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 107/255 (41%), Positives = 168/255 (65%), Gaps = 12/255 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG------IARQHSYMGAD 236 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G +A + ++ ++ Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFVASE 241 Query: 237 TKSAG-ETVVHSKEG 250 T++ E +V EG Sbjct: 242 TQADSIEEIVEVVEG 256 >gi|288870964|ref|ZP_06115941.2| ribosomal protein S2 [Clostridium hathewayi DSM 13479] gi|288865240|gb|EFC97538.1| ribosomal protein S2 [Clostridium hathewayi DSM 13479] Length = 269 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 150/223 (67%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ++D A Sbjct: 27 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVVKVDEAYKAVADIAAE 86 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 87 GGKILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKQIETM--S 144 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ +QEA L I Sbjct: 145 EDGTFDVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHTLGI 204 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P++ + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ Sbjct: 205 PLIGIADTNCDPEELDFVIPGNDDAIRAVKLIVSKMADAVIEA 247 >gi|116627032|ref|YP_819651.1| 30S ribosomal protein S2 [Streptococcus thermophilus LMD-9] gi|122268363|sp|Q03MW7|RS2_STRTD RecName: Full=30S ribosomal protein S2 gi|116100309|gb|ABJ65455.1| SSU ribosomal protein S2P [Streptococcus thermophilus LMD-9] Length = 255 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M+ A + + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMVDTAYEFVREAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 ILFV TK QA++ V E A R+ QY +N +WLGG +TNW T+ + I +L++++++ + Sbjct: 64 DAVILFVGTKKQAAEAVAEEATRAGQYYINHRWLGGTLTNWNTIKKRIARLKEIKQMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L IP+ Sbjct: 124 GTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVIYIVDPHKEQIAVKEAKKLGIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 184 VAMVDTNADPDEIDVIIPANDDAIRAVKLITSKMADAIIEG 224 >gi|212639535|ref|YP_002316055.1| 30S ribosomal protein S2 [Anoxybacillus flavithermus WK1] gi|226695071|sp|B7GG89|RS2_ANOFW RecName: Full=30S ribosomal protein S2 gi|212561015|gb|ACJ34070.1| Ribosomal protein S2 [Anoxybacillus flavithermus WK1] Length = 235 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK QA D V E A+RS + VN +WLGG +TN+ T+ + I++L+++E + E Sbjct: 65 GKILFVGTKKQAQDSVKEEAERSGMFYVNQRWLGGTLTNFATIQKRIKRLKEIERM--AE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++++ ++L++ L GI++M LPD +FV+D +E++A+ EAR+L IP Sbjct: 123 DGTFDVLPKKEVVKLKKELERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 183 IIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAILEA 224 >gi|55820175|ref|YP_138617.1| 30S ribosomal protein S2 [Streptococcus thermophilus LMG 18311] gi|55822063|ref|YP_140504.1| 30S ribosomal protein S2 [Streptococcus thermophilus CNRZ1066] gi|81676632|sp|Q5M1X5|RS2_STRT1 RecName: Full=30S ribosomal protein S2 gi|81676783|sp|Q5M6G5|RS2_STRT2 RecName: Full=30S ribosomal protein S2 gi|55736160|gb|AAV59802.1| 30S ribosomal protein S2 [Streptococcus thermophilus LMG 18311] gi|55738048|gb|AAV61689.1| 30S ribosomal protein S2 [Streptococcus thermophilus CNRZ1066] gi|312277497|gb|ADQ62154.1| 30S ribosomal protein S2 [Streptococcus thermophilus ND03] Length = 255 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M+ A + + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMVDTAYEFVREAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 ILFV TK QA++ V E A R+ QY +N +WLGG +TNW T+ + I +L++++++ + Sbjct: 64 DAVILFVGTKKQAAEAVAEEATRAGQYYINHRWLGGTLTNWNTIKKRIARLKEIKQMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L IP+ Sbjct: 124 GTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVIYIVDPHKEQIAVKEAKKLGIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 184 VAMVDTNADPDEIDVIIPANDDAIRAVKLITSKMADAIIEG 224 >gi|73748222|ref|YP_307461.1| 30S ribosomal protein S2 [Dehalococcoides sp. CBDB1] gi|147669004|ref|YP_001213822.1| 30S ribosomal protein S2 [Dehalococcoides sp. BAV1] gi|289432271|ref|YP_003462144.1| ribosomal protein S2 [Dehalococcoides sp. GT] gi|123759800|sp|Q3ZZC1|RS2_DEHSC RecName: Full=30S ribosomal protein S2 gi|189044936|sp|A5FS79|RS2_DEHSB RecName: Full=30S ribosomal protein S2 gi|73659938|emb|CAI82545.1| ribosomal protein S2 [Dehalococcoides sp. CBDB1] gi|146269952|gb|ABQ16944.1| SSU ribosomal protein S2P [Dehalococcoides sp. BAV1] gi|288945991|gb|ADC73688.1| ribosomal protein S2 [Dehalococcoides sp. GT] Length = 245 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 154/241 (63%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LLE+G FGH+ W+P+M++YIF +RN HIIDL +TV ML KA I+ Sbjct: 1 MPTTNIKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ GG++LFV TK QA + + E AKR Y +N +W GG++TN+ ++ I L LE+ Sbjct: 61 VSDGGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQ 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +L R + G ++M LPD++FVVD +EK+A+ EA+R+ Sbjct: 121 QARGDFSRLPKKEAQKLGEEIARLNRTMGGFKEMTRLPDVIFVVDPIKEKIAMAEAKRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P+VA+VDTN NPD VDY +P NDD+ R+I L C +A A I+ Q++ + ++ G Sbjct: 181 VPLVAMVDTNCNPDEVDYPVPSNDDAMRAIKLICSKMADAVIEA---QNAMKVTEVETTG 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|296454247|ref|YP_003661390.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. longum JDM301] gi|296183678|gb|ADH00560.1| ribosomal protein S2 [Bifidobacterium longum subsp. longum JDM301] Length = 281 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 106/240 (44%), Positives = 158/240 (65%), Gaps = 2/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL R L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNRQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 240 >gi|312866884|ref|ZP_07727097.1| ribosomal protein S2 [Streptococcus parasanguinis F0405] gi|322390408|ref|ZP_08063929.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 903] gi|311097667|gb|EFQ55898.1| ribosomal protein S2 [Streptococcus parasanguinis F0405] gi|321142866|gb|EFX38323.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 903] Length = 260 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 112/265 (42%), Positives = 171/265 (64%), Gaps = 14/265 (5%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA+D V E A R+ QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVILFVGTKKQAADAVAEEAVRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G RQ G D+ + E Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG--RQ----GEDSVATVE 235 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDG 267 + + EG + DS V++G Sbjct: 236 AELAATEG---QADSIEEIVEVVEG 257 >gi|27904714|ref|NP_777840.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|31076869|sp|Q89AP2|RS2_BUCBP RecName: Full=30S ribosomal protein S2 gi|27904111|gb|AAO26945.1| ribosomal protein S2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 228 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 103/218 (47%), Positives = 145/218 (66%), Gaps = 9/218 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L +GV FGH+ WNPKM+ +IF +N HII+L +T+ M AL + R Sbjct: 4 SMRDMLNAGVHFGHQTRYWNPKMKPFIFGSKNKVHIINLEKTMTMFNFALFELKKISLRK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE----- 121 G+ILFV TK AS + E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 64 GKILFVGTKQSASKIIKESAILCKQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSQDG 123 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 NK TKKE L R+ KL+ +L GI++MG LPD +FVVD + E +AI+EA L Sbjct: 124 TFNK----LTKKEVLLRMRELSKLENSLGGIKEMGSLPDALFVVDADHEHIAIREANNLG 179 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 I + ++VDTNS+PD VD++IPGNDD+ R++ L+ + V+ Sbjct: 180 ISVFSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLNAVS 217 >gi|283783273|ref|YP_003374027.1| ribosomal protein S2 [Gardnerella vaginalis 409-05] gi|283442137|gb|ADB14603.1| ribosomal protein S2 [Gardnerella vaginalis 409-05] Length = 272 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 112/257 (43%), Positives = 168/257 (65%), Gaps = 10/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V +WLGGM+TN++TVS +++L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVCERWLGGMLTNFQTVSTRVKRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-- 238 IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ +H+ GA ++ Sbjct: 181 GIPVVAIVDTNTDPESVEYPIPANDDAIRGIELLTSLMADAVAEGLL-EHAGKGAKSEGN 239 Query: 239 -----SAGETVVHSKEG 250 +A E + +KEG Sbjct: 240 DAQPMAAWEKELLTKEG 256 >gi|323141025|ref|ZP_08075931.1| ribosomal protein S2 [Phascolarctobacterium sp. YIT 12067] gi|322414473|gb|EFY05286.1| ribosomal protein S2 [Phascolarctobacterium sp. YIT 12067] Length = 245 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 144/223 (64%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYNFIREVAAAG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + E A R + VN +WLGGM+TN+KT+ I +LR LE + E Sbjct: 65 ENILFVGTKKQAQEAMKEEATRCNMFFVNERWLGGMLTNFKTIQTRIARLRKLEAM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE ++++ + +KL + L GI+DM LP MF+VD +E +A+ EA +L I Sbjct: 122 ADGTFDLLPKKEVISLKHEMEKLTKYLGGIKDMKKLPGAMFIVDPRKEHIAVLEAHKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA VDTN +PD +D+VIP NDD+ R++ L +A A ++G Sbjct: 182 PIVATVDTNCDPDEIDHVIPANDDAIRAVKLLTAKMADAVLEG 224 >gi|260892479|ref|YP_003238576.1| ribosomal protein S2 [Ammonifex degensii KC4] gi|260864620|gb|ACX51726.1| ribosomal protein S2 [Ammonifex degensii KC4] Length = 243 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 105/220 (47%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ L++A + D A+G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTLKKLEEAYYFVRDLAAQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK QA + E A R + VN +WLGGM+TN++T+ + I++LR+LEE+ N Sbjct: 65 GTILFVGTKRQAQQTIEEEATRCGMFFVNQRWLGGMLTNFQTIKRRIERLRELEEMEANG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E +KE + + ++++KL++ G+++M LP +FVVD +EK+A+ EAR+ IPIV Sbjct: 125 EIDLRPRKEAMRLRKEKEKLEKYFRGVKNMHSLPSALFVVDPRKEKIAVAEARKKGIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A+VDTN +PD +DYVIPGNDD+ R+I L +A A I+G Sbjct: 185 AIVDTNCDPDEIDYVIPGNDDAIRAIRLITSKIADAVIEG 224 >gi|73536330|pdb|1X18|E Chain E, Contact Sites Of Era Gtpase On The Thermus Thermophilus 30s Subunit Length = 231 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 150/221 (67%), Gaps = 10/221 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D RGG Sbjct: 1 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+ Q + +L +LE L + E Sbjct: 61 TILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTI-QRVHRLEELEALFASPE 119 Query: 127 NQGFTKKE-RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE RL+ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP++ Sbjct: 120 IEERPKKEQRLH---ELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVI 176 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+ DT+S+PDLVDY+IPGNDD+ RSI L+ S A+D I Sbjct: 177 ALADTDSDPDLVDYIIPGNDDAIRSI----QLILSRAVDLI 213 >gi|325929601|ref|ZP_08190715.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118] gi|325540111|gb|EGD11739.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118] Length = 260 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 144/224 (64%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S + G Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE E Sbjct: 61 TVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEA---AET 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L IP Sbjct: 118 DGTFDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 VIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 221 >gi|227824519|ref|ZP_03989351.1| 30S ribosomal protein S2 [Acidaminococcus sp. D21] gi|226905018|gb|EEH90936.1| 30S ribosomal protein S2 [Acidaminococcus sp. D21] Length = 243 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 149/222 (67%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++ + + A+G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEECYNFLRELAAQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + E + R+ + VN +WLGGM+TN+KT+ I++L +LE++ +E Sbjct: 65 GKVLFVGTKKQAQSAIKEESTRAGMFYVNERWLGGMLTNFKTIQTRIKRLHELEKM--EE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + + KL++ L GI++M LPD +FV+D +E I EAR+L IP Sbjct: 123 DGTFALLPKKEVIVLRHEMAKLEKYLGGIKEMKKLPDAIFVIDPRKEHNTILEARKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA VDTN +PD VDY++P NDD+ R++ L +A A ++G Sbjct: 183 VVATVDTNCDPDEVDYLMPANDDAIRAVRLLTSKMADAILEG 224 >gi|258516355|ref|YP_003192577.1| 30S ribosomal protein S2 [Desulfotomaculum acetoxidans DSM 771] gi|257780060|gb|ACV63954.1| ribosomal protein S2 [Desulfotomaculum acetoxidans DSM 771] Length = 248 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 148/223 (66%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLESGV FGH+ WNPKM YIF +RN +IIDL +TV M+ A I D G Sbjct: 21 SMKQLLESGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKMVDVAYNFIKDLALSG 80 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA + V E A++ + VN +WLGGM+TN++T+ + I +L +L+ + E Sbjct: 81 ETLLFVGTKKQAQESVKEEAEKCGMFYVNQRWLGGMLTNFQTIRKRIDRLHELDRM---E 137 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + ++++L++ L GI++M LP +FVVD +E++A+ EAR+L I Sbjct: 138 ADGTFSLLPKKEVAELMHEKERLQKFLGGIKEMKRLPAALFVVDPRKERIAVAEARKLGI 197 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +PD +DY+IPGNDD+ R++ L +A A ++G Sbjct: 198 PIVAIVDTNCDPDEIDYIIPGNDDAIRAVRLLTSKMAEAVLEG 240 >gi|229829212|ref|ZP_04455281.1| hypothetical protein GCWU000342_01299 [Shuttleworthia satelles DSM 14600] gi|229792375|gb|EEP28489.1| hypothetical protein GCWU000342_01299 [Shuttleworthia satelles DSM 14600] Length = 240 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 103/221 (46%), Positives = 149/221 (67%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YIF ERN HIIDL QTVPM+ A + D V++GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIFTERNQIHIIDLQQTVPMIDNAYNAVYDIVSQGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D + E A R + V+ +WLGGM+TN+ TV I +L+++E + +EN Sbjct: 61 TILFVGTKKQAQDAIAEEATRCGMFYVDQRWLGGMLTNFSTVKTRIARLKEIERM--REN 118 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE +E++ +KL++ L GI++M +PD +FVVD +E++ ++EA L I + Sbjct: 119 GTFDLLPKKEVAGLEKELEKLEKNLGGIKNMDRIPDAIFVVDPKKERICVKEAESLGITL 178 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + + D+N++PD +DYVIPGNDD+ R+I L +A A I+ Sbjct: 179 IGIADSNADPDELDYVIPGNDDAIRAIRLITSTIADAVIEA 219 >gi|148656150|ref|YP_001276355.1| 30S ribosomal protein S2 [Roseiflexus sp. RS-1] gi|209573679|sp|A5UUV2|RS2_ROSS1 RecName: Full=30S ribosomal protein S2 gi|148568260|gb|ABQ90405.1| SSU ribosomal protein S2P [Roseiflexus sp. RS-1] Length = 262 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 109/236 (46%), Positives = 154/236 (65%), Gaps = 2/236 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLESG FGH+ WNPKM YIF RN HIIDL +T+ L +A Q I +TVA G Sbjct: 10 SMRALLESGAHFGHQTKRWNPKMRPYIFTARNGIHIIDLQKTITGLTEAYQFIVETVAAG 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 ++LFV TK QA + + E A R+ Q+ V +WLGG +TN+ T+ + ++ L DLE+ + Sbjct: 70 QKVLFVGTKKQAQETIAEEATRAGQFYVTQRWLGGTLTNFATMRKRLRYLNDLEDQRARG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E TK E L ++ + +KL + G++ M LP +F+VD ++E LA++EA + IP+V Sbjct: 130 EFNKLTKAEALKLDAEIEKLNKVFGGMKTMDRLPGALFIVDPHKEALAVKEANKTGIPVV 189 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 A+VDTN +PDL+DYVIP NDD+ RSI L +A AAI+G R+ S + AD AG Sbjct: 190 AMVDTNCDPDLIDYVIPCNDDAIRSIRLIAAKIADAAIEGQNRRES-LQADVHGAG 244 >gi|325295603|ref|YP_004282117.1| ribosomal protein S2 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066051|gb|ADY74058.1| ribosomal protein S2 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 281 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 107/241 (44%), Positives = 163/241 (67%), Gaps = 7/241 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLE+GV FGH+ WNPKM+++IF ERN HIIDL QT+ ++A ++D VA G Sbjct: 37 TMKELLEAGVHFGHQKERWNPKMKKFIFTERNGIHIIDLQQTLKYFEQAYDYVADLVANG 96 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILF+ TK Q D V E A+R + VN +WLGG +TN++T+ +SI KL+ L+++ E Sbjct: 97 GTILFLCTKKQGQDIVKEEAQRCGMFYVNKRWLGGTLTNFQTIRKSIFKLKMLKKM---E 153 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +G KKE + ++RK++KL++ + GI +M +PD +F+VD RE+ A++EAR+ + Sbjct: 154 EEGVFDRLPKKEAMKLKRKKEKLEKYIGGIENMNRIPDALFIVDIVREENAVKEARKAGV 213 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PIVA+VDTN++PDLVD IP NDD+ R+I L +A A ++G R+ + A+ + E Sbjct: 214 PIVALVDTNADPDLVDLPIPANDDAIRAIRLLTSRIADAVLEGKMRKDAIKLAEGEEVEE 273 Query: 243 T 243 Sbjct: 274 V 274 >gi|168491747|ref|ZP_02715890.1| ribosomal protein S2 [Streptococcus pneumoniae CDC0288-04] gi|183574052|gb|EDT94580.1| ribosomal protein S2 [Streptococcus pneumoniae CDC0288-04] Length = 259 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 102/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTNS+PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNSDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|322392452|ref|ZP_08065912.1| 30S ribosomal protein S2 [Streptococcus peroris ATCC 700780] gi|321144444|gb|EFX39845.1| 30S ribosomal protein S2 [Streptococcus peroris ATCC 700780] Length = 275 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 20 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 79 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 80 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 137 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 138 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 197 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 198 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 240 >gi|291536035|emb|CBL09147.1| SSU ribosomal protein S2P [Roseburia intestinalis M50/1] Length = 247 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/232 (42%), Positives = 153/232 (65%), Gaps = 3/232 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDIAAA 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R + VN +WLGGM+TN++T+ I +L+++E + Sbjct: 64 GGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFRTIQSRIARLKEIETMATD 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ IQEA L I + Sbjct: 124 GTFEVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICIQEAHTLGIKL 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 + + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ A Q + M A+ Sbjct: 184 IGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE--ANQGAEMTAE 233 >gi|291459159|ref|ZP_06598549.1| ribosomal protein S2 [Oribacterium sp. oral taxon 078 str. F0262] gi|291418413|gb|EFE92132.1| ribosomal protein S2 [Oribacterium sp. oral taxon 078 str. F0262] Length = 249 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 99/220 (45%), Positives = 145/220 (65%), Gaps = 5/220 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL +TV M+ A ++ VA GG Sbjct: 6 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKTVKMVDDAYNAMAQIVANGG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LFV TK QA D + A R ++ VN +WLGGM+TN+KT+ IQ+L+++E++ E+ Sbjct: 66 TVLFVGTKKQAQDAIKAEALRCGEFYVNERWLGGMLTNFKTIRSRIQRLKEIEKM--SED 123 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE + ++ KL+ L GI+DM +PD +FVVD +EK+ +QEA L + + Sbjct: 124 GTFDVLPKKEVTLLRKEWGKLEANLGGIKDMKAVPDAIFVVDPKKEKICVQEAHALGVTL 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DTN++P+ +DY+IPGNDD+ R+I L +A A I+ Sbjct: 184 FGIADTNADPEELDYIIPGNDDAIRAIKLIVSKMADAVIE 223 >gi|111114945|ref|YP_709563.1| 30S ribosomal protein S2 [Borrelia afzelii PKo] gi|110890219|gb|ABH01387.1| ribosomal protein S2 [Borrelia afzelii PKo] Length = 257 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 156/218 (71%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 1 MKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKDGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 61 KVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI++ Sbjct: 121 FDMISKKEISQLNREKLKLAKNLSGIKDMETLPGAVFIIDPKREQIAINEARKLKIPIIS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Sbjct: 181 VVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILE 218 >gi|188577162|ref|YP_001914091.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521614|gb|ACD59559.1| ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 262 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 145/224 (64%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ W+P M +YIF R HII+L +TVP+ A+ +S + G Sbjct: 1 MRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQKRG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILF+ TK A + E A+R + +WLGG +TN++TV QS+ +L++LE E Sbjct: 61 TILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEA---AET 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G K E L++ R+R+KL +L GI++M LPD +FV+D E +AI+EA++L IP Sbjct: 118 DGTFDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 178 VIAVVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKA 221 >gi|228477778|ref|ZP_04062406.1| ribosomal protein S2 [Streptococcus salivarius SK126] gi|312862598|ref|ZP_07722839.1| ribosomal protein S2 [Streptococcus vestibularis F0396] gi|322374178|ref|ZP_08048711.1| ribosomal protein S2 [Streptococcus sp. C150] gi|322517672|ref|ZP_08070535.1| 30S ribosomal protein S2 [Streptococcus vestibularis ATCC 49124] gi|228250470|gb|EEK09684.1| ribosomal protein S2 [Streptococcus salivarius SK126] gi|311101858|gb|EFQ60060.1| ribosomal protein S2 [Streptococcus vestibularis F0396] gi|321276883|gb|EFX53955.1| ribosomal protein S2 [Streptococcus sp. C150] gi|322123660|gb|EFX95252.1| 30S ribosomal protein S2 [Streptococcus vestibularis ATCC 49124] Length = 255 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 153/221 (69%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADTAYEFVREAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 ILFV TK QA++ V E A R+ QY +N +WLGG +TNW T+ + I +L++++++ + Sbjct: 64 DAVILFVGTKKQAAEAVAEEATRAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKQMEAD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L IP+ Sbjct: 124 GTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVIYIVDPHKEQIAVKEAKKLGIPV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 184 VAMVDTNADPDEIDVIIPANDDAIRAVKLITSKMADAIIEG 224 >gi|282882124|ref|ZP_06290765.1| ribosomal protein S2 [Peptoniphilus lacrimalis 315-B] gi|281298154|gb|EFA90609.1| ribosomal protein S2 [Peptoniphilus lacrimalis 315-B] Length = 274 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 103/264 (39%), Positives = 165/264 (62%), Gaps = 20/264 (7%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKKIEEAYDFAREISAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + + AK+ +N +WLGG++TN+KT+ + I +L L E+ Sbjct: 64 GGKILFVGTKKQAQDAIEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLFKLIEM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + + +R++L++ L GI+DM +PD +++VD +EK+A++EA L Sbjct: 121 EDDGTFDVLPKKEVIQLIHERERLEKFLGGIKDMDKMPDALYIVDPKKEKIAVKEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +PD +D+ IPGNDD+ R++ L + +A+A ++G K Sbjct: 181 IPVIGIVDTNCDPDELDFPIPGNDDAIRAVKLITETIANAVLEG------------KQGT 228 Query: 242 ETVVH-SKEGMQLEEDSQSSESSV 264 + VV +E M EE+ S E ++ Sbjct: 229 QNVVEDDEENMDTEENVPSEEVNI 252 >gi|227547306|ref|ZP_03977355.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212265|gb|EEI80161.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 294 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 105/240 (43%), Positives = 158/240 (65%), Gaps = 2/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 14 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 73 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 74 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 133 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 134 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 193 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 194 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 253 >gi|307711196|ref|ZP_07647618.1| ribosomal protein S2 [Streptococcus mitis SK321] gi|307617158|gb|EFN96336.1| ribosomal protein S2 [Streptococcus mitis SK321] Length = 259 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|238924137|ref|YP_002937653.1| ribosomal protein S2 [Eubacterium rectale ATCC 33656] gi|238875812|gb|ACR75519.1| ribosomal protein S2 [Eubacterium rectale ATCC 33656] Length = 263 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A +SD A+ Sbjct: 23 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYDAVSDIAAQ 82 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN++T+ I +L+ +E + Sbjct: 83 GGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFRTIESRIARLKAIETM--S 140 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI+DM +PD +FVVD +E++ I+EA+ L I Sbjct: 141 EDGTFDVLPKKEVIALKKEWEKLEKNLGGIKDMKRIPDAIFVVDPKKERICIKEAQALGI 200 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ + DTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 201 TLIGIADTNCDPDELDYVIPGNDDAIRAVKLIVSKMADAVIEA 243 >gi|110004591|emb|CAK98928.1| 30s ribosomal protein s2 [Spiroplasma citri] Length = 359 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 151/224 (67%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T L E+G QFGH+ WNPKM+ YI+ E+N HIIDL QT+ L+ +++++ A Sbjct: 4 ELTREMLWEAGAQFGHQTKRWNPKMKPYIYGEKNKIHIIDLQQTLWRLEDVKKLMANIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 R G+ILFV TK QA V +AA+R + VN +WLGG +TN KT+ +++L ++E + Sbjct: 64 RKGKILFVGTKKQAKWIVKDAAERCECFYVNQRWLGGTLTNLKTIHLRVKRLWNIERQEK 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N E + KKE++ I++++DKL++ L GI+ M LP +FVVD E +A++EAR+LRIP Sbjct: 124 NGELKLLPKKEQMLIKKEKDKLEKFLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++A+ DTN +PD +DY+IP NDD+SRSIA+ +A D + Sbjct: 184 VIAICDTNVDPDPIDYIIPANDDTSRSIAIITHHIADLYGDAMG 227 >gi|23326784|gb|AAN25298.1| 30S ribosomal protein S2 [Bifidobacterium longum NCC2705] Length = 296 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 105/240 (43%), Positives = 158/240 (65%), Gaps = 2/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 16 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 76 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 135 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 136 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 195 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 196 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 255 >gi|307705884|ref|ZP_07642722.1| ribosomal protein S2 [Streptococcus mitis SK597] gi|307620545|gb|EFN99643.1| ribosomal protein S2 [Streptococcus mitis SK597] Length = 258 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|313681364|ref|YP_004059102.1| SSU ribosomal protein s2p [Sulfuricurvum kujiense DSM 16994] gi|313154224|gb|ADR32902.1| SSU ribosomal protein S2P [Sulfuricurvum kujiense DSM 16994] Length = 258 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 147/222 (66%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + A Q + D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNAYQQVVDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK QA + +AA V+++WLGGM+TN+ T+ +SI+KL +EE+ N Sbjct: 63 KTVLFVGTKKQARVAIRDAAVACGMPYVDNRWLGGMLTNFPTIQKSIRKLDIIEEMQANG 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L + R+++KL L GIR M LPD+MFV+D +E +A+QEAR L I +V Sbjct: 123 QINLLTKKEALMMNRQKEKLIAYLGGIRHMKTLPDMMFVIDAVKEHIAVQEARNLGIQVV 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 A +DTN +PD++D IPGNDD+ RSI LFC +A A +G A Sbjct: 183 APLDTNCDPDVIDIPIPGNDDAIRSIQLFCKEMAEAINEGKA 224 >gi|291524871|emb|CBK90458.1| SSU ribosomal protein S2P [Eubacterium rectale DSM 17629] gi|291529012|emb|CBK94598.1| SSU ribosomal protein S2P [Eubacterium rectale M104/1] Length = 244 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A +SD A+ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYDAVSDIAAQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN++T+ I +L+ +E + Sbjct: 64 GGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFRTIESRIARLKAIETM--S 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI+DM +PD +FVVD +E++ I+EA+ L I Sbjct: 122 EDGTFDVLPKKEVIALKKEWEKLEKNLGGIKDMKRIPDAIFVVDPKKERICIKEAQALGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ + DTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 182 TLIGIADTNCDPDELDYVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|255037249|ref|YP_003087870.1| 30S ribosomal protein S2 [Dyadobacter fermentans DSM 18053] gi|254950005|gb|ACT94705.1| ribosomal protein S2 [Dyadobacter fermentans DSM 18053] Length = 272 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++LL++GV FGH W+P+M YIF E+N HIIDL++T+ L A + Sbjct: 1 MAQIEYKELLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNKTLSCLNDAEAALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +I+FVATK QA + V E AKR V +WLGGM+TN+ T+ +S++K++ LE++ Sbjct: 61 VRSGRKIMFVATKKQAQEIVTEEAKRLKMPYVTDRWLGGMLTNFGTIRKSLKKMQTLEKM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E K+ERL + R+++KL+R L G+ D+ LP +F+VD RE +A+ EA+RL Sbjct: 121 LKDEATVSNIAKRERLMLTREKEKLERVLGGVADLTRLPAALFIVDVKREHIAVAEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPI A+ DTNSNP+LVD+ IP NDD+ ++I+L + A +G+ Sbjct: 181 NIPIFAICDTNSNPELVDFPIPSNDDAYKAISLITLAIGKAIEEGL 226 >gi|161485598|ref|NP_696662.2| 30S ribosomal protein S2 [Bifidobacterium longum NCC2705] gi|189439266|ref|YP_001954347.1| 30S ribosomal protein S2 [Bifidobacterium longum DJO10A] gi|312132642|ref|YP_003999981.1| rpsb [Bifidobacterium longum subsp. longum BBMN68] gi|317482867|ref|ZP_07941875.1| ribosomal protein S2 [Bifidobacterium sp. 12_1_47BFAA] gi|322689309|ref|YP_004209043.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis 157F] gi|322691321|ref|YP_004220891.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. longum JCM 1217] gi|209573726|sp|Q8G486|RS2_BIFLO RecName: Full=30S ribosomal protein S2 gi|238692051|sp|B3DRT0|RS2_BIFLD RecName: Full=30S ribosomal protein S2 gi|189427701|gb|ACD97849.1| Ribosomal protein S2 [Bifidobacterium longum DJO10A] gi|291516836|emb|CBK70452.1| SSU ribosomal protein S2P [Bifidobacterium longum subsp. longum F8] gi|311773593|gb|ADQ03081.1| RpsB [Bifidobacterium longum subsp. longum BBMN68] gi|316915712|gb|EFV37126.1| ribosomal protein S2 [Bifidobacterium sp. 12_1_47BFAA] gi|320456177|dbj|BAJ66799.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. longum JCM 1217] gi|320460645|dbj|BAJ71265.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis 157F] Length = 281 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 105/240 (43%), Positives = 158/240 (65%), Gaps = 2/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 240 >gi|320458047|dbj|BAJ68668.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 287 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 152/226 (67%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 7 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 67 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 126 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 127 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKETLAVEEAHKL 186 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ Sbjct: 187 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGL 232 >gi|306826162|ref|ZP_07459497.1| 30S ribosomal protein S2 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431638|gb|EFM34619.1| 30S ribosomal protein S2 [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 275 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 152/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 20 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 79 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 80 DAVVLFVGTKKQAADAVAEEAVRSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 136 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 137 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 197 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 240 >gi|239621370|ref|ZP_04664401.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515831|gb|EEQ55698.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 281 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 105/240 (43%), Positives = 158/240 (65%), Gaps = 2/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 240 >gi|229496631|ref|ZP_04390345.1| ribosomal protein S2 [Porphyromonas endodontalis ATCC 35406] gi|229316528|gb|EEN82447.1| ribosomal protein S2 [Porphyromonas endodontalis ATCC 35406] Length = 289 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 100/229 (43%), Positives = 150/229 (65%), Gaps = 5/229 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T QLL++G FGH+ WNP M YIF ERNNTHIIDL +TV ++++ ++I + Sbjct: 4 ITFEQLLKAGAHFGHQPRKWNPAMAPYIFMERNNTHIIDLHKTVAKIEESTEIIRNMARN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +ILFVATK Q + V E AK V +W GGM+TN+ T+ ++++K+ ++++ K Sbjct: 64 GKKILFVATKKQVKEPVEELAKSVGMPYVVERWPGGMLTNFPTIRKAVKKMVQIDKM--K 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ + +K+E+L +ER+R KL++ L I+DM LP +FVVD +E +A++EA RL I Sbjct: 122 EDGTYSNLSKREKLQVERQRAKLEKTLGSIQDMNRLPSALFVVDIIKEHIAVREATRLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 P+ A+VDTN++P LVDYVIP NDDS ++ L + SA +G+ S Sbjct: 182 PVFAIVDTNADPKLVDYVIPANDDSRETVELIMGAMCSAISEGLTEYKS 230 >gi|297617171|ref|YP_003702330.1| ribosomal protein S2 [Syntrophothermus lipocalidus DSM 12680] gi|297145008|gb|ADI01765.1| ribosomal protein S2 [Syntrophothermus lipocalidus DSM 12680] Length = 232 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 145/222 (65%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL QTV ++A + V+ G Sbjct: 5 TMKQLLEAGVHFGHQTRRWNPKMAPYIYMERNGIYIIDLQQTVKKFEEAFDFVRSMVSEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + + + A R + VN +WLGGM+TN+KT+ + + R E +E Sbjct: 65 KTILFVGTKKQAQETIKDEATRCGMFYVNQRWLGGMLTNFKTIRKRV--YRLKELEKMEE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KKE + +R+KL+R L GI+DM LP ++VVD +EK+A+ EAR+L+IP Sbjct: 123 EGAFELLPKKEVARLRAEREKLERFLRGIKDMDELPGAVYVVDPRKEKIAVAEARKLKIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ +VDTN +PD +DY+IPGNDD+ R++ L +A A ++G Sbjct: 183 VIGIVDTNCDPDEIDYIIPGNDDAIRAVKLITSKIADAVLEG 224 >gi|182685151|ref|YP_001836898.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CGSP14] gi|182630485|gb|ACB91433.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CGSP14] Length = 275 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 20 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 79 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 80 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 137 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 138 EDGTFEVLPKKEVALLNKQRTRLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 197 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 198 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 240 >gi|168335179|ref|ZP_02693285.1| 30S ribosomal protein S2 [Epulopiscium sp. 'N.t. morphotype B'] Length = 255 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 97/221 (43%), Positives = 147/221 (66%), Gaps = 5/221 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T + +A + D A G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTAKKMDEAFYAMKDIAADG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA D + A R Y +N +WLGGM+TN++T+ + +L+ LE L +E Sbjct: 65 GKVLFVGTKKQAQDSIKAEALRCGMYYINHRWLGGMLTNFQTIRSRVDRLKKLE--LMQE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++++ KL+ L GI++M G+PD +F++D +E +AIQEA L IP Sbjct: 123 DGTFDLLPKKEVIELKKEMIKLENNLGGIKEMKGVPDAIFIIDPRKEAIAIQEAHILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + ++VDTN +PD +D+ IPGNDD+ R++ L +A A I+ Sbjct: 183 VFSIVDTNCDPDEIDFPIPGNDDAIRAVKLITAKLADAIIE 223 >gi|150024557|ref|YP_001295383.1| 30S ribosomal protein S2 [Flavobacterium psychrophilum JIP02/86] gi|166225271|sp|A6GWU2|RS2_FLAPJ RecName: Full=30S ribosomal protein S2 gi|149771098|emb|CAL42565.1| 30S ribosomal protein S2 [Flavobacterium psychrophilum JIP02/86] Length = 266 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 108/250 (43%), Positives = 158/250 (63%), Gaps = 8/250 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ LLE+GV FGH W+P M YI+ ERN HII+L +T +++A + + A Sbjct: 4 KIEVKDLLEAGVHFGHMTRKWDPNMAPYIYMERNGIHIINLYKTAAKIEEANEALKKIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +ILFVATK QA D V E A + + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 64 SGRKILFVATKKQAKDIVAEKAAAANMPYITERWPGGMLTNFVTIRKAVKKMSTIDRM-- 121 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ F +KKERL ++R R KL++ L I DM LP +FVVD E +AI+EA++L Sbjct: 122 KKDGTFMTLSKKERLQVDRLRAKLEKNLGSISDMSRLPAALFVVDIKAEHIAIKEAQKLN 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-- 239 IP+ A+VDTNS+P LV+YVIP NDD+S+SI LV A IDG+A + S ADT + Sbjct: 182 IPVFAMVDTNSDPRLVEYVIPANDDASKSIDKILTLVTEAIIDGLANRTSDKEADTTTEE 241 Query: 240 -AGETVVHSK 248 A E V +K Sbjct: 242 VAQEEVTDTK 251 >gi|33519736|ref|NP_878568.1| 30S ribosomal protein S2 [Candidatus Blochmannia floridanus] gi|61215722|sp|Q7VRE6|RS2_BLOFL RecName: Full=30S ribosomal protein S2 gi|33504081|emb|CAD83342.1| 30S ribosomal protein S2 [Candidatus Blochmannia floridanus] Length = 231 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+ M AL + Sbjct: 1 MKKLSMREMLQAGVHFGHQTRYWNPKMKPFIFGIRNKIHIINLDKTIVMFSNALVELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK + + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ALAKGKILFVGTKRATRESIKSTALICGQFFVNYRWLGGMLTNWKTVRQSIKRLKDLE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 N+ G TKKE L + R+ L+ +L GI++MGGLPD +F +E +AI+EA Sbjct: 119 -NQSQDGTFDKLTKKEVLILNRELISLENSLGGIKNMGGLPDALFTAGAEQEHIAIKEAN 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 L IP+ ++VDTNS+PD +D++IPGNDD+ R+I L+ ++V++ Sbjct: 178 SLGIPVFSIVDTNSDPDGIDFIIPGNDDAIRAINLYLNIVSNV 220 >gi|206900304|ref|YP_002250927.1| ribosomal protein S2 [Dictyoglomus thermophilum H-6-12] gi|238058193|sp|B5YEG9|RS2_DICT6 RecName: Full=30S ribosomal protein S2 gi|206739407|gb|ACI18465.1| ribosomal protein S2 [Dictyoglomus thermophilum H-6-12] Length = 246 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 99/227 (43%), Positives = 145/227 (63%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH+ W PKM+ YIF ERN HIIDL +T+ L++A + + Sbjct: 1 MAHILMKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + E AKR + VN +WLGGM+TN+ T+ I + LEEL Sbjct: 61 AKEGKTFLFVGTKKQAQQTIEEEAKRCGAFYVNQRWLGGMLTNFTTIKSRIDYMVKLEEL 120 Query: 123 LNKENQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +N G+ KK+ + R+ +KL + DG+R + LPD++++VD RE++A++EA Sbjct: 121 ---KNNGYFEKLPKKQANRLNRELEKLVKVFDGLRGIEKLPDVLYIVDPKREEIAVKEAN 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPI+A+VDTN +P+L+ Y IPGNDD+ RSI L +A A ++G Sbjct: 178 KLGIPIIAIVDTNCDPELITYPIPGNDDAIRSIKLITSKIADAILEG 224 >gi|213691940|ref|YP_002322526.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254764458|sp|B7GQR8|RS2_BIFLI RecName: Full=30S ribosomal protein S2 gi|213523401|gb|ACJ52148.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 281 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 152/226 (67%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKETLAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGL 226 >gi|303254876|ref|ZP_07340961.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS455] gi|303259703|ref|ZP_07345679.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP-BS293] gi|303262170|ref|ZP_07348115.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP14-BS292] gi|303264605|ref|ZP_07350524.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS397] gi|303266086|ref|ZP_07351980.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS457] gi|303268494|ref|ZP_07354288.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS458] gi|209573684|sp|B2INN2|RS2_STRPS RecName: Full=30S ribosomal protein S2 gi|302598147|gb|EFL65208.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS455] gi|302636810|gb|EFL67300.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP14-BS292] gi|302639255|gb|EFL69714.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP-BS293] gi|302641995|gb|EFL72348.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS458] gi|302644390|gb|EFL74643.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS457] gi|302645975|gb|EFL76203.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS397] Length = 259 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRTRLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|331269641|ref|YP_004396133.1| 30S ribosomal protein S2 [Clostridium botulinum BKT015925] gi|329126191|gb|AEB76136.1| ribosomal protein S2 [Clostridium botulinum BKT015925] Length = 244 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 150/224 (66%), Gaps = 6/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + VA Sbjct: 15 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSVVAD 74 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E + RS + VN++WLGGM+TN+KT+ I KL LE++ + Sbjct: 75 GKEVLFVGTKKQAQEAIEEESLRSGMHFVNNRWLGGMLTNFKTIRTRINKLEQLEKM--E 132 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRLR 181 E+ F KKE + + +++KL++ L GI+++ MF+VD +EK AI EA+ L Sbjct: 133 EDGTFEVLPKKEVIKLRNEKEKLEKNLGGIKNLDASKLGAMFIVDPRKEKNAIAEAKNLG 192 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 193 IPVVAIVDTNCDPDEIDYVIPGNDDAIRAVRLITSKIAEAIIEG 236 >gi|169834077|ref|YP_001695568.1| 30S ribosomal protein S2 [Streptococcus pneumoniae Hungary19A-6] gi|238688276|sp|B1IAC8|RS2_STRPI RecName: Full=30S ribosomal protein S2 gi|168996579|gb|ACA37191.1| ribosomal protein S2 [Streptococcus pneumoniae Hungary19A-6] Length = 259 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|148984518|ref|ZP_01817806.1| ribosomal protein S2 [Streptococcus pneumoniae SP3-BS71] gi|148988858|ref|ZP_01820273.1| ribosomal protein S2 [Streptococcus pneumoniae SP6-BS73] gi|148993633|ref|ZP_01823104.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP9-BS68] gi|148997983|ref|ZP_01825496.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP11-BS70] gi|149003081|ref|ZP_01827990.1| ribosomal protein S2 [Streptococcus pneumoniae SP14-BS69] gi|149007744|ref|ZP_01831353.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP18-BS74] gi|149020134|ref|ZP_01835108.1| ribosomal protein S2 [Streptococcus pneumoniae SP23-BS72] gi|168484331|ref|ZP_02709283.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1873-00] gi|168487193|ref|ZP_02711701.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1087-00] gi|168489289|ref|ZP_02713488.1| ribosomal protein S2 [Streptococcus pneumoniae SP195] gi|168494024|ref|ZP_02718167.1| ribosomal protein S2 [Streptococcus pneumoniae CDC3059-06] gi|168576087|ref|ZP_02721992.1| ribosomal protein S2 [Streptococcus pneumoniae MLV-016] gi|194398612|ref|YP_002038811.1| 30S ribosomal protein S2 [Streptococcus pneumoniae G54] gi|221232913|ref|YP_002512067.1| 30S ribosomal protein S2 [Streptococcus pneumoniae ATCC 700669] gi|225855708|ref|YP_002737220.1| 30S ribosomal protein S2 [Streptococcus pneumoniae JJA] gi|225857783|ref|YP_002739294.1| 30S ribosomal protein S2 [Streptococcus pneumoniae P1031] gi|225859986|ref|YP_002741496.1| 30S ribosomal protein S2 [Streptococcus pneumoniae 70585] gi|225862031|ref|YP_002743540.1| 30S ribosomal protein S2 [Streptococcus pneumoniae Taiwan19F-14] gi|237651028|ref|ZP_04525280.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CCRI 1974] gi|237821141|ref|ZP_04596986.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CCRI 1974M2] gi|298229441|ref|ZP_06963122.1| 30S ribosomal protein S2 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255965|ref|ZP_06979551.1| 30S ribosomal protein S2 [Streptococcus pneumoniae str. Canada MDR_19A] gi|307128478|ref|YP_003880509.1| 30S ribosomal protein S2 [Streptococcus pneumoniae 670-6B] gi|238690814|sp|B5E3W1|RS2_STRP4 RecName: Full=30S ribosomal protein S2 gi|254764492|sp|C1CBJ2|RS2_STRP7 RecName: Full=30S ribosomal protein S2 gi|254764493|sp|B8ZQA6|RS2_STRPJ RecName: Full=30S ribosomal protein S2 gi|254764495|sp|C1CHL4|RS2_STRZJ RecName: Full=30S ribosomal protein S2 gi|254764496|sp|C1CNI8|RS2_STRZP RecName: Full=30S ribosomal protein S2 gi|254764497|sp|C1CUD2|RS2_STRZT RecName: Full=30S ribosomal protein S2 gi|147755993|gb|EDK63036.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP11-BS70] gi|147758822|gb|EDK65818.1| ribosomal protein S2 [Streptococcus pneumoniae SP14-BS69] gi|147760739|gb|EDK67711.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP18-BS74] gi|147923295|gb|EDK74409.1| ribosomal protein S2 [Streptococcus pneumoniae SP3-BS71] gi|147925669|gb|EDK76745.1| ribosomal protein S2 [Streptococcus pneumoniae SP6-BS73] gi|147927854|gb|EDK78876.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP9-BS68] gi|147930812|gb|EDK81793.1| ribosomal protein S2 [Streptococcus pneumoniae SP23-BS72] gi|172042417|gb|EDT50463.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1873-00] gi|183569920|gb|EDT90448.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1087-00] gi|183572311|gb|EDT92839.1| ribosomal protein S2 [Streptococcus pneumoniae SP195] gi|183575947|gb|EDT96475.1| ribosomal protein S2 [Streptococcus pneumoniae CDC3059-06] gi|183578085|gb|EDT98613.1| ribosomal protein S2 [Streptococcus pneumoniae MLV-016] gi|194358279|gb|ACF56727.1| 30S ribosomal protein S2 [Streptococcus pneumoniae G54] gi|220675375|emb|CAR69977.1| 30S ribosomal protein S2 [Streptococcus pneumoniae ATCC 700669] gi|225720931|gb|ACO16785.1| ribosomal protein S2 [Streptococcus pneumoniae 70585] gi|225723434|gb|ACO19287.1| ribosomal protein S2 [Streptococcus pneumoniae JJA] gi|225724645|gb|ACO20497.1| ribosomal protein S2 [Streptococcus pneumoniae P1031] gi|225727861|gb|ACO23712.1| ribosomal protein S2 [Streptococcus pneumoniae Taiwan19F-14] gi|301795124|emb|CBW37597.1| 30S ribosomal protein S2 [Streptococcus pneumoniae INV104] gi|301800947|emb|CBW33609.1| 30S ribosomal protein S2 [Streptococcus pneumoniae OXC141] gi|306485540|gb|ADM92409.1| ribosomal protein S2 [Streptococcus pneumoniae 670-6B] gi|327388959|gb|EGE87307.1| ribosomal protein S2 [Streptococcus pneumoniae GA04375] gi|332071293|gb|EGI81788.1| ribosomal protein S2 [Streptococcus pneumoniae GA17545] gi|332071484|gb|EGI81978.1| ribosomal protein S2 [Streptococcus pneumoniae GA41301] gi|332071657|gb|EGI82150.1| ribosomal protein S2 [Streptococcus pneumoniae GA17570] gi|332198628|gb|EGJ12711.1| ribosomal protein S2 [Streptococcus pneumoniae GA41317] gi|332198837|gb|EGJ12919.1| ribosomal protein S2 [Streptococcus pneumoniae GA47368] gi|332199036|gb|EGJ13117.1| ribosomal protein S2 [Streptococcus pneumoniae GA47901] Length = 259 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|256419928|ref|YP_003120581.1| ribosomal protein S2 [Chitinophaga pinensis DSM 2588] gi|256034836|gb|ACU58380.1| ribosomal protein S2 [Chitinophaga pinensis DSM 2588] Length = 340 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 146/222 (65%), Gaps = 1/222 (0%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +QLLE+GV FGH WNPKM YIF E+ HIIDL++TV LQ+A + G + Sbjct: 9 QQLLEAGVHFGHLKKKWNPKMLPYIFAEKKGIHIIDLNKTVEGLQEAAAALKSIAKSGKK 68 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN- 127 I+FVATK QA + V EAAKR V +WLGGM+TN+ T+ +S++K++ +E++L Sbjct: 69 IMFVATKKQAKEIVAEAAKRVNMPYVTERWLGGMLTNFATIRKSVKKMQSIEKMLTDGTF 128 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 TKKERL + R ++K+++ L GI + +P +F+VD + E + + EARRL I + Sbjct: 129 DSITKKERLTLTRDKEKMEKVLGGIAQLARVPAALFLVDISHEHIGLAEARRLGISTFGM 188 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 VDTNS+P VD+ +P NDD+++SIA+ + +A+A +G+A + Sbjct: 189 VDTNSDPTKVDFAVPANDDATKSIAIITNYIAAAIAEGLAER 230 >gi|15902019|ref|NP_346623.1| 30S ribosomal protein S2 [Streptococcus pneumoniae TIGR4] gi|111658653|ref|ZP_01409303.1| hypothetical protein SpneT_02000243 [Streptococcus pneumoniae TIGR4] gi|149012810|ref|ZP_01833755.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP19-BS75] gi|25009217|sp|Q97N56|RS2_STRPN RecName: Full=30S ribosomal protein S2 gi|14973725|gb|AAK76263.1| ribosomal protein S2 [Streptococcus pneumoniae TIGR4] gi|147763241|gb|EDK70180.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP19-BS75] gi|301802876|emb|CBW35657.1| 30S ribosomal protein S2 [Streptococcus pneumoniae INV200] Length = 259 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|270291853|ref|ZP_06198068.1| ribosomal protein S2 [Streptococcus sp. M143] gi|270279381|gb|EFA25223.1| ribosomal protein S2 [Streptococcus sp. M143] Length = 259 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 152/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|15839169|ref|NP_299857.1| 30S ribosomal protein S2 [Xylella fastidiosa 9a5c] gi|28199827|ref|NP_780141.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1] gi|71898290|ref|ZP_00680464.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|182682578|ref|YP_001830738.1| 30S ribosomal protein S2 [Xylella fastidiosa M23] gi|54039457|sp|P66547|RS2_XYLFT RecName: Full=30S ribosomal protein S2 gi|54041957|sp|P66546|RS2_XYLFA RecName: Full=30S ribosomal protein S2 gi|238691116|sp|B2I9U3|RS2_XYLF2 RecName: Full=30S ribosomal protein S2 gi|9107797|gb|AAF85377.1|AE004065_2 30S ribosomal protein S2 [Xylella fastidiosa 9a5c] gi|28057948|gb|AAO29790.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1] gi|71732029|gb|EAO34086.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|182632688|gb|ACB93464.1| ribosomal protein S2 [Xylella fastidiosa M23] gi|307578859|gb|ADN62828.1| 30S ribosomal protein S2 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 266 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/228 (44%), Positives = 148/228 (64%), Gaps = 5/228 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ +PKM IF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK A D + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGSVLFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELE-- 118 Query: 123 LNKENQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L + + F+ K E L + R+ KL+ +L GI+DM +PD +FV+D E +AI+EA++ Sbjct: 119 LAETDGTFSKLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 L IP+VAVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 179 LGIPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|71275210|ref|ZP_00651497.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Dixon] gi|71901971|ref|ZP_00684021.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|170731204|ref|YP_001776637.1| 30S ribosomal protein S2 [Xylella fastidiosa M12] gi|238687956|sp|B0U5I9|RS2_XYLFM RecName: Full=30S ribosomal protein S2 gi|71164019|gb|EAO13734.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Dixon] gi|71728257|gb|EAO30438.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|167965997|gb|ACA13007.1| 30S ribosomal protein S2 [Xylella fastidiosa M12] Length = 266 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 101/228 (44%), Positives = 148/228 (64%), Gaps = 5/228 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ +PKM IF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK A D + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGSVLFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELE-- 118 Query: 123 LNKENQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L + + F+ K E L + R+ KL+ +L GI+DM +PD +FV+D E +AI+EA++ Sbjct: 119 LAETDGTFSKLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 L IP+VAVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 179 LGIPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGKA 226 >gi|257784508|ref|YP_003179725.1| 30S ribosomal protein S2 [Atopobium parvulum DSM 20469] gi|257473015|gb|ACV51134.1| ribosomal protein S2 [Atopobium parvulum DSM 20469] Length = 250 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 102/239 (42%), Positives = 154/239 (64%), Gaps = 4/239 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI+ LL++G +GH+ WNPKM+ YIF +RN +I+DL QT+ A + + + Sbjct: 8 KITIQTLLDAGCHYGHQTRRWNPKMKPYIFGDRNGIYILDLKQTMLGADAAYTFLKNIAS 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GGR+LFV TK QA + + A R+ +N +WLGGM+TN+ T+ I++L +LE ++ Sbjct: 68 KGGRVLFVGTKKQAQEPIATEATRANMPYINQRWLGGMLTNFVTMRSRIKRLEELEAMVE 127 Query: 125 KENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE+ ++ KL+ L G+RDM LP +FVVD+ RE+ AI+EA RL IP Sbjct: 128 DGRMATLPKKEQALKNKELTKLQLNLGGVRDMTSLPQALFVVDSKREENAIREANRLHIP 187 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH---SYMGADTKS 239 +V+++DTNS+PD+VDY IP NDD+ RSI+L C L A A + G ++ MGA++K+ Sbjct: 188 VVSLLDTNSDPDVVDYGIPANDDAIRSISLMCQLAADAILAGSGKEQISAEEMGAESKT 246 >gi|15904061|ref|NP_359611.1| 30S ribosomal protein S2 [Streptococcus pneumoniae R6] gi|116517128|ref|YP_817425.1| 30S ribosomal protein S2 [Streptococcus pneumoniae D39] gi|38258367|sp|Q8CWM8|RS2_STRR6 RecName: Full=30S ribosomal protein S2 gi|122277729|sp|Q04HW3|RS2_STRP2 RecName: Full=30S ribosomal protein S2 gi|15459726|gb|AAL00822.1| 30S Ribosomal protein S2 [Streptococcus pneumoniae R6] gi|116077704|gb|ABJ55424.1| ribosomal protein S2 [Streptococcus pneumoniae D39] Length = 259 Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|254457743|ref|ZP_05071171.1| ribosomal protein S2 [Campylobacterales bacterium GD 1] gi|207086535|gb|EDZ63819.1| ribosomal protein S2 [Campylobacterales bacterium GD 1] Length = 254 Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 145/222 (65%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + ++ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 +LFV TK QA V +AA V+++WLGGM+TN+ T+ +SI+KL + E+ N Sbjct: 63 QTVLFVGTKKQARSSVRDAAIACGMPYVDNRWLGGMLTNFPTIQKSIRKLDVITEMQENG 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L + RK++KL+ GIR+M LPD++FVVD +E +AI EAR L IP+V Sbjct: 123 QIDLLTKKEALMLSRKKEKLQEYFGGIRNMKKLPDMLFVVDAVKEHIAILEARCLGIPVV 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 A +DTN +PDL+ Y IPGNDD+ RSI LFC + A +G A Sbjct: 183 APLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTEAINEGKA 224 >gi|291563111|emb|CBL41927.1| SSU ribosomal protein S2P [butyrate-producing bacterium SS3/4] Length = 254 Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 149/223 (66%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ++D A Sbjct: 17 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVADIAAE 76 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E++ Sbjct: 77 GGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKAIEKM--S 134 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++ +KL++ L GI++M +PD +F+VD +E++ +QEA L I Sbjct: 135 EDGTFDVLPKKEVIELKKEWEKLEKNLGGIKEMKKIPDAIFIVDPKKERICVQEAHTLGI 194 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 195 TLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 237 >gi|289168889|ref|YP_003447158.1| 30S ribosomal protein S2 [Streptococcus mitis B6] gi|307707874|ref|ZP_07644351.1| ribosomal protein S2 [Streptococcus mitis NCTC 12261] gi|307710338|ref|ZP_07646779.1| ribosomal protein S2 [Streptococcus mitis SK564] gi|288908456|emb|CBJ23298.1| 30S ribosomal protein S2 [Streptococcus mitis B6] gi|307616134|gb|EFN95330.1| ribosomal protein S2 [Streptococcus mitis NCTC 12261] gi|307618930|gb|EFN98065.1| ribosomal protein S2 [Streptococcus mitis SK564] Length = 259 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|323341767|ref|ZP_08082000.1| 30S ribosomal protein S2 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464192|gb|EFY09385.1| 30S ribosomal protein S2 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 307 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 103/238 (43%), Positives = 155/238 (65%), Gaps = 9/238 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++LLESGV +GH+ WNPKM+ YI+ +N +IIDL++T L +A + D +G Sbjct: 5 TMKKLLESGVHYGHQTRRWNPKMKPYIYAAKNRIYIIDLNKTQEKLDEAYAAMKDIAEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++L V TK QA V+E A RS + +N +WLGG +TN++T+ +SI++L ++EE+ E Sbjct: 65 GKLLIVGTKKQAQTIVLEEALRSGSFFINQRWLGGTLTNFRTIQKSIRRLVEIEEM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N G +TKKE + +++D+L+ L GI++M LPD +FVVD + A+ EAR+L I Sbjct: 122 NSGSINVYTKKEVSLLLKEKDRLENFLGGIKEMKKLPDALFVVDPIEDANAVAEARKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTK 238 P+ +VDTN +PD VDY IPGNDD+ R+I L+A A I+ G Q +Y D + Sbjct: 182 PVFGIVDTNCDPDAVDYAIPGNDDAIRAIRTIVGLMADAMIEPKGGVLQVAYQDQDVE 239 >gi|94985153|ref|YP_604517.1| 30S ribosomal protein S2 [Deinococcus geothermalis DSM 11300] gi|123381930|sp|Q1IZI6|RS2_DEIGD RecName: Full=30S ribosomal protein S2 gi|94555434|gb|ABF45348.1| ribosomal protein S2 [Deinococcus geothermalis DSM 11300] Length = 264 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 104/260 (40%), Positives = 159/260 (61%), Gaps = 8/260 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D RG Sbjct: 5 SMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQIDRSFDYIKDLAERG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R+ V S+WLGGM+TN++T+ I +L +L+++ Sbjct: 65 GVILFVGTKKQAQEIVELEARRTGMPYVTSRWLGGMLTNFRTIRTRIDRLNELDDMFESG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 K ER+ + +R++L R + GIR M LPD +FVVD +E +A+QEA +L IP++ Sbjct: 125 RVNDRPKAERIELAAERERLLRFVGGIRKMTRLPDAIFVVDPTKEVIAVQEANKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A+ DT+S+PD++DY++PGNDD+ RSI L + ++ AR G +GE V Sbjct: 185 ALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLIVE--AR-----GGGEDVSGERVS 237 Query: 246 HSKEGMQLEEDSQSSESSVL 265 ++ ED + +++ L Sbjct: 238 PDNADIEAAEDGEEVDNAQL 257 >gi|309799233|ref|ZP_07693482.1| ribosomal protein S2 [Streptococcus infantis SK1302] gi|308117167|gb|EFO54594.1| ribosomal protein S2 [Streptococcus infantis SK1302] Length = 260 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 64 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 122 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 182 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|229815415|ref|ZP_04445747.1| hypothetical protein COLINT_02463 [Collinsella intestinalis DSM 13280] gi|229808948|gb|EEP44718.1| hypothetical protein COLINT_02463 [Collinsella intestinalis DSM 13280] Length = 301 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 100/227 (44%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G FGH+ WNPKM+ +IF ERNN +I+DL QT+ KA + +T A Sbjct: 57 KINIRTLLEAGCHFGHQTRRWNPKMKPFIFGERNNIYILDLKQTIVEADKAYTFLKETAA 116 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GG++LFV TK QA + V AA+R+ +N +WLGGM+TN+ T+ I +L +LE ++ Sbjct: 117 KGGKVLFVGTKKQAQEAVKAAAERANMPYINQRWLGGMLTNFVTIRSRINRLEELEGMVA 176 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE+ + ++ KL+ L G R++ P +FV+DT RE+ AI+EA+RL IP Sbjct: 177 DGSMALRGKKEQAVLGKELAKLQANLGGARELKSTPAALFVIDTKREENAIKEAKRLGIP 236 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VA++DTNS+PD+VDY IP NDD+ +I L +L A A + G ++ Sbjct: 237 VVALIDTNSDPDVVDYGIPCNDDAISAIQLMSELFADACLAGSGKEQ 283 >gi|193214248|ref|YP_001995447.1| 30S ribosomal protein S2 [Chloroherpeton thalassium ATCC 35110] gi|238692699|sp|B3QV46|RS2_CHLT3 RecName: Full=30S ribosomal protein S2 gi|193087725|gb|ACF13000.1| ribosomal protein S2 [Chloroherpeton thalassium ATCC 35110] Length = 250 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 104/228 (45%), Positives = 141/228 (61%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LL+SG FGH W PKM+ YIF E+N HIIDL +TV + AL + Sbjct: 1 MAQLKLEDLLKSGAHFGHLTRRWCPKMKPYIFMEKNGIHIIDLKKTVSLADDALNAVGAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA V E A+R+ V +WLGGM+TN+ T+ QSI++L +E + Sbjct: 61 ASTGKEILFVGTKKQAKAIVAEQAERAGMPYVAERWLGGMLTNFSTIRQSIRRLNSIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKERL + R+++KL R L GI M LP +F++D +E +A++EA L Sbjct: 121 EIDGTFDMITKKERLMLMREKEKLVRVLGGISKMTRLPAAIFLIDVKKEHIAVREAYSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPI A+VDTN +P+ +DYVIP NDD+ RSI L VA A ID A Q Sbjct: 181 IPIFAIVDTNCDPEFIDYVIPANDDAIRSIELITSSVADAIIDATAVQ 228 >gi|139439760|ref|ZP_01773151.1| Hypothetical protein COLAER_02182 [Collinsella aerofaciens ATCC 25986] gi|133774910|gb|EBA38730.1| Hypothetical protein COLAER_02182 [Collinsella aerofaciens ATCC 25986] Length = 242 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 103/239 (43%), Positives = 155/239 (64%), Gaps = 5/239 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G FGH+ WNPKM+ +IF ERN +I+DL QT+ +A + + VA Sbjct: 4 KINIRTLLEAGCHFGHQTRRWNPKMKPFIFGERNGIYILDLKQTILDADQAYTFVKN-VA 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GG +LFV TK QA + V AA+R+ +N +WLGGM+TN+ T+ I ++ +LE ++ Sbjct: 63 KGGNVLFVGTKKQAQEAVKNAAERANMPYINQRWLGGMLTNFVTIRSRINRMEELEAMVE 122 Query: 125 KENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE+ + ++ KL+ L G RDM GLP +FV+DT RE+ AI+EA+RL IP Sbjct: 123 DGRMAVLPKKEQAVLGKELTKLQTNLGGARDMKGLPQALFVIDTKREENAIKEAQRLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH---SYMGADTKS 239 +VA++DTNS+PD V+Y IP NDD+ ++ L C+L+A A + G ++ + M A+ K+ Sbjct: 183 VVALIDTNSDPDEVEYGIPCNDDAISAVTLMCELMADACLAGSGKEQVSEAEMAAEPKA 241 >gi|46191254|ref|ZP_00120409.2| COG0052: Ribosomal protein S2 [Bifidobacterium longum DJO10A] Length = 293 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 152/226 (67%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGL 226 >gi|300813723|ref|ZP_07094043.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512180|gb|EFK39360.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 274 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 102/264 (38%), Positives = 165/264 (62%), Gaps = 20/264 (7%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + A Sbjct: 4 ISMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKKIEEAYDFAREISAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA D + + AK+ +N +WLGG++TN+KT+ + I +L L E+ Sbjct: 64 GGKILFVGTKKQAQDAIEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLFKLIEM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + + +R++L++ L GI+DM +PD +++VD +EK+A++EA L Sbjct: 121 EDDGTFDVLPKKEVIQLIHERERLEKFLGGIKDMDKMPDALYIVDPKKEKIAVKEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +PD +D+ IPGNDD+ R++ L + +A+A ++G K Sbjct: 181 IPVIGIVDTNCDPDELDFPIPGNDDAIRAVKLITETIANAVLEG------------KQGT 228 Query: 242 ETVVH-SKEGMQLEEDSQSSESSV 264 + VV +E + EE+ S E ++ Sbjct: 229 QNVVEDDEENLDTEENVPSEEVNI 252 >gi|206603567|gb|EDZ40047.1| Ribosomal protein S2 [Leptospirillum sp. Group II '5-way CG'] Length = 274 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 104/253 (41%), Positives = 156/253 (61%), Gaps = 6/253 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++++LE+GV FGH+ WNPKM+R+I+ ERN +I+DL QTV + A + V Sbjct: 20 TLKEMLEAGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQTVRRFRVAREFAKSVVRNR 79 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK QA + + A+R Y V +WLGGM+TN +TV +S+++L +EE++ Sbjct: 80 GSILFVGTKRQAQPIIQQEAQRCGMYFVTERWLGGMLTNLQTVRKSVERLNKIEEMMESG 139 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE +E++ +KL L+GIR + LP +FV+D +E +A+ EA RL IP++ Sbjct: 140 QISRLPKKEVAQLEKEHEKLASILNGIRGLSHLPAAIFVIDPKKEHIAVHEANRLGIPVI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A+VDTN +PD++ + IP NDD+ RSI L +A A +DG G +T E+ Sbjct: 200 AMVDTNCDPDMIQFPIPSNDDAIRSIRLITAGIADAVLDGALESQVQKGHET-PVSESFS 258 Query: 246 HSKEGMQLEEDSQ 258 +KE EEDS+ Sbjct: 259 ETKE----EEDSE 267 >gi|288818008|ref|YP_003432355.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6] gi|288787407|dbj|BAI69154.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6] gi|308751608|gb|ADO45091.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6] Length = 276 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 98/228 (42%), Positives = 152/228 (66%), Gaps = 7/228 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE+GV FGH WNPKM +++ RN HIIDL++TV L++A ++D +A Sbjct: 4 ISMRDLLEAGVHFGHSKGRWNPKMAPFLYGVRNGIHIIDLNKTVVYLEQAYNFVADRIAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA D + E A+R+ +N +W+GG++TN++TV +S+ KL+ LE + Sbjct: 64 GAEILFVGTKKQAKDVIKEEAERAGVPYINERWVGGLLTNFRTVKKSMLKLKTLERM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + RK + L++ GI ++ +PD++++VDT RE +A+QEAR+L Sbjct: 121 EAEGVFEVLPKKEVRMMRRKMEHLRKLYAGILNLERVPDMVWIVDTVREHIAVQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + IVA+ D+N +PD++DY +PGNDD+ +SI L +A A I+G R+ Sbjct: 181 VTIVAIADSNCDPDVIDYPVPGNDDAIKSIKLLTAKIADAVIEGKQRR 228 >gi|298501731|ref|YP_003723671.1| 30S ribosomal protein S2 [Streptococcus pneumoniae TCH8431/19A] gi|307068825|ref|YP_003877791.1| hypothetical protein SPAP_2258 [Streptococcus pneumoniae AP200] gi|298237326|gb|ADI68457.1| 30S ribosomal protein S2 [Streptococcus pneumoniae TCH8431/19A] gi|306410362|gb|ADM85789.1| hypothetical protein SPAP_2258 [Streptococcus pneumoniae AP200] Length = 286 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 153/223 (68%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 31 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 90 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + + Sbjct: 91 DAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--E 148 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L I Sbjct: 149 EDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGI 208 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 209 PVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEG 251 >gi|319946093|ref|ZP_08020341.1| 30S ribosomal protein S2 [Streptococcus australis ATCC 700641] gi|319747739|gb|EFV99984.1| 30S ribosomal protein S2 [Streptococcus australis ATCC 700641] Length = 310 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 152/224 (67%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 54 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 113 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LFV TK QA++ V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 114 DAVVLFVGTKKQAAEAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 170 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L Sbjct: 171 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLG 230 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 231 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG 274 >gi|118411020|ref|YP_874415.1| 30S ribosomal protein S2 [Phaeodactylum tricornutum] gi|125987743|sp|A0T0E0|RR2_PHATC RecName: Full=30S ribosomal protein S2, chloroplastic gi|116739767|gb|ABK20638.1| 30S ribosomal protein S2 [Phaeodactylum tricornutum] Length = 226 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 103/226 (45%), Positives = 142/226 (62%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ + WNPKM YI+ E NN HI+DL Q+ +L++A + Sbjct: 1 MSDISLSQLLEAGVHFGHKAYRWNPKMFPYIYSEVNNIHILDLVQSATLLKEANLYLESA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 LFV TK QAS + + AKR Y VN +WLGGM+TNW T+ + I L+DLE+ Sbjct: 61 ARENKTFLFVGTKRQASTLIAQEAKRCDSYYVNHRWLGGMLTNWSTLKERIAHLKDLEQ- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + N F TKKE ++ KL+R LDGI+DM LPD+ V+D RE AI+E R+ Sbjct: 120 -QEANNTFDLLTKKEGALRRKELKKLRRHLDGIKDMKNLPDIAIVIDQKRETTAIRECRK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+V+++DTN +PDLVD IPGNDD+ RSI L + + + G Sbjct: 179 LGIPVVSILDTNCDPDLVDIPIPGNDDAVRSIKLILKSLTDSILIG 224 >gi|307297828|ref|ZP_07577634.1| ribosomal protein S2 [Thermotogales bacterium mesG1.Ag.4.2] gi|306917088|gb|EFN47470.1| ribosomal protein S2 [Thermotogales bacterium mesG1.Ag.4.2] Length = 283 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 92/223 (41%), Positives = 150/223 (67%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGHR WNPKM+ YI+ ER +I+DL +T+ ++++A + ++ G Sbjct: 18 SMKQLLEAGVHFGHRTRRWNPKMKPYIYGERKGIYIVDLQKTLKLIEEAYDFVRNSAQEG 77 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 LFV TK QA V E AKR + VN++WLGG++TN+ T+ + I+ L++ EE+ E Sbjct: 78 ATFLFVGTKRQAQQIVEEEAKRCDSFYVNNRWLGGLLTNFTTIKKRIEALKNFEEM---E 134 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE+ I ++ DKL++ L G+++M LPD++F+VD +E++A+ EA +L I Sbjct: 135 ESGKLSALPKKEQSMINKRLDKLRKNLSGVKEMQKLPDVIFIVDPKQEEIAVAEANKLGI 194 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ + DTN +PD++D++IPGNDD+ R+I L +A A ++G Sbjct: 195 KVIGIADTNCDPDVIDFIIPGNDDAIRAIQLIVHTMADAILEG 237 >gi|326798858|ref|YP_004316677.1| ribosomal protein S2 [Sphingobacterium sp. 21] gi|326549622|gb|ADZ78007.1| ribosomal protein S2 [Sphingobacterium sp. 21] Length = 274 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 147/221 (66%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T ++LL++GV FGH W+PKM +YIF ERN HIIDL++T+ L++A I V G Sbjct: 5 TYQELLDAGVHFGHLTRKWDPKMAKYIFMERNGIHIIDLNKTLAKLEEAASAIKQIVKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++LFVATK QA D V E AK V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 65 RKVLFVATKKQAKDIVAEQAKAVNMPYVTERWLGGMLTNFATVRKSIKKMSNIDKMTKDG 124 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE+L I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L IP Sbjct: 125 TYDVLSKKEKLMIQRERIKLENLLGGIADLNRLPAALFIIDVKKEHIAVSEALKLNIPTF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P +D+ IP NDD+++SI L +++ A I+G+ Sbjct: 185 AMVDTNSDPTNIDFPIPANDDATKSITLITNVIKQAIIEGL 225 >gi|325282618|ref|YP_004255159.1| ribosomal protein S2 [Deinococcus proteolyticus MRP] gi|324314427|gb|ADY25542.1| ribosomal protein S2 [Deinococcus proteolyticus MRP] Length = 266 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 144/219 (65%), Gaps = 1/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH WNPK R+IF ERN IIDL +T+ + ++ I D +G Sbjct: 5 SMKQLLEAGVHFGHETKRWNPKFGRFIFGERNGIFIIDLQKTLKQVDRSFDYIKDLAEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA + V A+R+ V S+WLGGM+TN++T+ +++L +L+EL Sbjct: 65 GTILFVGTKKQAQEIVELEARRTGMPFVTSRWLGGMLTNYRTIRTRVERLDELDELFESG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 K ER+ + +RD+L+R + GIR M LPD +FV+D +E +A++EA +L IP++ Sbjct: 125 RINDRPKAERVQLGTERDRLQRFVGGIRKMNRLPDAIFVIDPTKEVIAVKEANKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 A+ DT+S+PD++DY++PGNDD+ RSI L + ++ Sbjct: 185 ALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLLVE 223 >gi|311748346|ref|ZP_07722131.1| ribosomal protein S2 [Algoriphagus sp. PR1] gi|126576855|gb|EAZ81103.1| ribosomal protein S2 [Algoriphagus sp. PR1] Length = 253 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/228 (42%), Positives = 149/228 (65%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + LL++GV FGH W+P+M YIF E+N HIIDL++T+ L +A I Sbjct: 1 MAKLEYKDLLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNKTLACLDEASNAIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +++FVATK QA D V E AKR V +WLGGM+TN+ T+ +S++K+ L++L Sbjct: 61 VRSGKKVMFVATKKQAKDLVAEEAKRLNMPFVTERWLGGMLTNFATIRKSLKKMSGLDKL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +E KKERL + R++DK++ L GI D+ LP +F+VD RE +AI EA++L Sbjct: 121 MKEEAYTNLAKKERLMVSRQKDKMENVLGGIADLSRLPAALFIVDIKREHIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ A+VDTNSNP+ V++ IP NDD+ +S++L +A +G++ + Sbjct: 181 IPVYALVDTNSNPNEVEFPIPANDDAFKSVSLLVKAFGAAIEEGLSER 228 >gi|330850948|ref|YP_004376698.1| 30S ribosomal protein S2 [Fistulifera sp. JPCC DA0580] gi|328835768|dbj|BAK19064.1| 30S ribosomal protein S2 [Fistulifera sp. JPCC DA0580] Length = 229 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 102/228 (44%), Positives = 141/228 (61%), Gaps = 15/228 (6%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ QLLE+GV FGH+ + WNPKM YI+ E NN HI+DL Q+ +L++A + + Sbjct: 4 ISLSQLLEAGVHFGHKAYRWNPKMFPYIYSEVNNIHILDLVQSATLLKEANKYLESAAKE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE----- 120 G LF+ TK QAS + + AKR Y VN +WLGGM+TNW TV + I L+DLE Sbjct: 64 GKSFLFIGTKRQASTLIAQEAKRCNSYYVNHRWLGGMLTNWSTVKERIAYLQDLEKQEAD 123 Query: 121 ---ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +LL K+ G +KE KL++ LDG++ M LPD+ V+D RE AI+E Sbjct: 124 NTFDLLTKKEAGLRRKE-------LKKLRKHLDGLKAMPNLPDIAIVIDQKREITAIREC 176 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 R+L IP+V+++DTN +PDLVD IPGNDD+ RSI L + + I G Sbjct: 177 RKLGIPVVSILDTNCDPDLVDIPIPGNDDAVRSIKLILKSLTDSIIKG 224 >gi|210633131|ref|ZP_03297698.1| hypothetical protein COLSTE_01611 [Collinsella stercoris DSM 13279] gi|210159285|gb|EEA90256.1| hypothetical protein COLSTE_01611 [Collinsella stercoris DSM 13279] Length = 264 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 100/227 (44%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G FGH+ WNPKM+ +IF ERNN +I+DL QT+ KA + +T A Sbjct: 20 KINIRTLLEAGCHFGHQTRRWNPKMKPFIFGERNNIYILDLKQTIVEADKAYTFLKETAA 79 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GG++LFV TK QA + V AA+R+ +N +WLGGM+TN+ T+ I +L +LE ++ Sbjct: 80 KGGKVLFVGTKKQAQEAVKTAAERANMPYINQRWLGGMLTNFVTIRSRINRLEELEGMVA 139 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE+ + ++ KL+ L G R++ P +FV+DT RE+ AI+EA+RL IP Sbjct: 140 DGSMALRGKKEQAVLGKELAKLQANLGGARELKSTPAALFVIDTKREENAIKEAKRLGIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VA++DTNS+PD+VDY IP NDD+ +I L +L A A + G ++ Sbjct: 200 VVALIDTNSDPDVVDYGIPCNDDAISAIQLMSELFADACLAGSGKEQ 246 >gi|283769074|ref|ZP_06341980.1| ribosomal protein S2 [Bulleidia extructa W1219] gi|283104431|gb|EFC05808.1| ribosomal protein S2 [Bulleidia extructa W1219] Length = 323 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 151/223 (67%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++++LE+GV FGH+ WNPKM+ +I+ +N+ +IIDL++T L +A + + G Sbjct: 21 SMKKMLENGVHFGHQTRKWNPKMKPFIYTAKNHVYIIDLAKTQEKLDEAYEALKKIAEDG 80 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA ++E A RS + +N +WLGG +TN++T+ +SI+KL ++EE+ E Sbjct: 81 GKVLFVGTKKQAQATILEEALRSGSFYINQRWLGGTLTNFRTIQKSIKKLLEIEEM---E 137 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G + KKE+ + +K+D+L+ L GI++M LPD +FVVD E A+ EAR+L I Sbjct: 138 ATGAINVYKKKEQALLLKKKDRLENFLGGIKEMKKLPDAIFVVDPLEEHNAVAEARKLGI 197 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ A++DTN++PD+VDY IP NDD+ RS+ L +A A ++ Sbjct: 198 PVFALIDTNADPDMVDYPIPSNDDALRSVKLMVSAIADALVEA 240 >gi|3123267|sp|P19679|RS2_SPICI RecName: Full=30S ribosomal protein S2 gi|2384681|gb|AAB69994.1| ribosomal protein S2 [Spiroplasma citri] Length = 359 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 150/224 (66%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T L E+G QFGH+ WNPKM+ YI+ E+N HIIDL QT+ L+ +++++ A Sbjct: 4 ELTREMLWEAGAQFGHQTKRWNPKMKPYIYGEKNKIHIIDLQQTLWRLEDVKKLMANIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 R G+ILFV TK QA V +AA+R + VN +WLGG +TN KT+ +++L ++E + Sbjct: 64 RKGKILFVGTKKQAKWIVKDAAERCESFYVNQRWLGGTLTNLKTIHLRVKRLWNIERQEK 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N E + KKE++ I++++DKL++ L GI+ M LP +FVVD E +A++EAR+LRIP Sbjct: 124 NGELKLLPKKEQMLIKKEKDKLEKFLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++A+ DTN +P +DY+IP NDD+SRSIA+ +A D + Sbjct: 184 VIAICDTNVDPVPIDYIIPANDDTSRSIAIITHHIADLYGDAMG 227 >gi|332664683|ref|YP_004447471.1| 30S ribosomal protein S2 [Haliscomenobacter hydrossis DSM 1100] gi|332333497|gb|AEE50598.1| ribosomal protein S2 [Haliscomenobacter hydrossis DSM 1100] Length = 239 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 142/221 (64%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T ++LL++GV FGH WNPKM YIF ER HIIDL++T+ L +A + G Sbjct: 5 TYKELLDAGVHFGHLKKKWNPKMSPYIFMERKGIHIIDLNRTLDALDRAANAMRQMAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I+FVATK QA D V EAAK + +WLGGMMTN+ T+ +S++K+++++ +L Sbjct: 65 KKIMFVATKKQARDIVSEAAKTVGMPFIADRWLGGMMTNFATIRRSVKKMQNIDRMLADG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 TKKERL + R+RDKL + L GI ++ LP +FVVD + E +AI EA +L I Sbjct: 125 TLTSVTKKERLTLTRERDKLDKVLGGIANLNRLPAAIFVVDISHEHIAIAEAHKLGIRTF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +VDTNS+P+ VDY IPGNDD+S+S+ + D + A G+ Sbjct: 185 GIVDTNSDPNQVDYAIPGNDDASKSVKIITDYMVEAIRQGL 225 >gi|37521399|ref|NP_924776.1| 30S ribosomal protein S2 [Gloeobacter violaceus PCC 7421] gi|61215681|sp|Q7NJK2|RS2_GLOVI RecName: Full=30S ribosomal protein S2 gi|35212396|dbj|BAC89771.1| 30S ribosomal protein S2 [Gloeobacter violaceus PCC 7421] Length = 274 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 144/220 (65%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ Q+LE+GV FGH+ WNPKM RYIF +RN HIIDL+QT +L +A + + +G Sbjct: 5 SLPQMLEAGVHFGHQTRRWNPKMRRYIFTDRNGIHIIDLTQTAHLLDEAYSYLREASDQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK QA+ + + AKR + VN +WLGGM+TNW T+ S+ +L++LE + Sbjct: 65 KKILFVGTKRQAAPVIAQEAKRCGMFWVNQRWLGGMLTNWDTIRTSVDQLKELETMEANG 124 Query: 127 NQGFTKKERLNIERKR-DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 K+ ++ RK+ ++L + L G+++M PD++ VVD RE+ A+ EARRL IPIV Sbjct: 125 TLDLLPKKEASVTRKKLERLTKYLGGLKNMRRKPDILLVVDQRREQNAVMEARRLNIPIV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++DTN +PDL D IP NDD+ RSI L +A A +G Sbjct: 185 SLLDTNCDPDLTDVGIPANDDAIRSIRLIVGKLADAIYEG 224 >gi|170768499|ref|ZP_02902952.1| ribosomal protein S2 [Escherichia albertii TW07627] gi|170122603|gb|EDS91534.1| ribosomal protein S2 [Escherichia albertii TW07627] Length = 215 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 100/198 (50%), Positives = 139/198 (70%), Gaps = 1/198 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ +IF RN HII+L +TVPM +AL ++ +R G+ILFV TK AS+ V +AA Sbjct: 1 MKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKR 147 Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L R+ +KL+ Sbjct: 61 CDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLEN 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ Sbjct: 121 SLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDG 225 R++ L+ VA+ +G Sbjct: 181 IRAVTLYLGAVAATVREG 198 >gi|193212094|ref|YP_001998047.1| 30S ribosomal protein S2 [Chlorobaculum parvum NCIB 8327] gi|238692613|sp|B3QLF7|RS2_CHLP8 RecName: Full=30S ribosomal protein S2 gi|193085571|gb|ACF10847.1| ribosomal protein S2 [Chlorobaculum parvum NCIB 8327] Length = 251 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 111/262 (42%), Positives = 157/262 (59%), Gaps = 18/262 (6%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +F + Q+L +GV FGH W+PKM+ YIF E+N HIIDL +T+ M +AL+ I Sbjct: 1 MSKFQLEQMLRAGVHFGHLARRWSPKMKPYIFMEKNGVHIIDLKKTLVMADEALKAIEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G I+ V TK QA + E A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 61 ASTGREIMLVGTKKQAKVIIAEQAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIDRM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G TKKERL + R++DKL R L GI +M LP +FVVD +E +AI+EAR Sbjct: 121 ---ETDGTFDMITKKERLMLLREKDKLVRILGGIANMNRLPAALFVVDIKKEHIAIKEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 L IPI A+VDTN +PD VDY+IP NDD+ RSI L VA I+ + Q Sbjct: 178 SLGIPIFAMVDTNCDPDEVDYIIPANDDAIRSIELMVKAVADTIIEARSLQEEQ------ 231 Query: 239 SAGETVVHSKEGMQLEEDSQSS 260 E + E Q+EED++ + Sbjct: 232 ---EAIAEMDE--QVEEDAEEA 248 >gi|256827635|ref|YP_003151594.1| 30S ribosomal protein S2P [Cryptobacterium curtum DSM 15641] gi|256583778|gb|ACU94912.1| SSU ribosomal protein S2P [Cryptobacterium curtum DSM 15641] Length = 294 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I+ L+++G FGH+ WNPKM+ +IF R + +IIDL +T+ + +A +S Sbjct: 1 MEKVSIQTLVDAGAHFGHQTRRWNPKMKPFIFGSRGDIYIIDLKKTLIGMDEAYSFVSTL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + EAA VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 61 AANGGTILFVGTKKQAQEPIAEAANSCGMPYVNARWLGGMLTNFVTIRSRVSRMEELEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE++ + ++ KL+ L+GIR+M +PD +FVVDTNRE ++I+EA+RL Sbjct: 121 DADGRMEKLPKKEQILLHKELTKLQTNLNGIRNMKRVPDAIFVVDTNRELISIREAQRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +PIV ++DTN +PD V++ IP NDD+ RS+ LFC+ +A A I GI Sbjct: 181 VPIVGLIDTNCDPDDVNFGIPANDDAIRSVKLFCNFIAQAVIAGIG 226 >gi|217967590|ref|YP_002353096.1| ribosomal protein S2 [Dictyoglomus turgidum DSM 6724] gi|226697638|sp|B8E2Y2|RS2_DICTD RecName: Full=30S ribosomal protein S2 gi|217336689|gb|ACK42482.1| ribosomal protein S2 [Dictyoglomus turgidum DSM 6724] Length = 246 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 145/227 (63%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH+ W PKM+ YIF ERN HIIDL +T+ L++A + + Sbjct: 1 MAHILMKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + E AKR + VN +WLGGM+TN+ T+ I + LEEL Sbjct: 61 AKEGKTFLFVGTKKQAQQTIEEEAKRCGAFYVNQRWLGGMLTNFTTIKSRIDYMIKLEEL 120 Query: 123 LNKENQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +N G+ KK+ + R+ +KL + DG+R + +PD++++VD RE++A++EA Sbjct: 121 ---KNNGYFDKLPKKQANRLNRELEKLIKVFDGLRGIERIPDVLYIVDPKREEIAVKEAN 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPI+A+VDTN +P+L+ Y IPGNDD+ RSI L +A A ++G Sbjct: 178 KLGIPIIAIVDTNCDPELITYPIPGNDDAIRSIKLITSKIADAILEG 224 >gi|21674595|ref|NP_662660.1| 30S ribosomal protein S2 [Chlorobium tepidum TLS] gi|25009198|sp|Q8KBK6|RS2_CHLTE RecName: Full=30S ribosomal protein S2 gi|21647794|gb|AAM73002.1| ribosomal protein S2 [Chlorobium tepidum TLS] Length = 249 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 104/225 (46%), Positives = 144/225 (64%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +F + ++L +GV FGH WNPKM+ YIF E+N HIIDL +T+ M ++AL+ I + Sbjct: 4 KFQLEEMLRAGVHFGHLARRWNPKMKPYIFMEKNGVHIIDLKKTLVMAEEALKAIEAIAS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G I+ V TK QA + E A+R+ V +WLGGM+TN+ T+ QSI+++ +E + Sbjct: 64 TGREIMLVGTKKQAKVIIAEQAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIERM-- 121 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G TKKERL + R++DKL R L GI +M LP +FVVD +E +A++EAR L Sbjct: 122 -ETDGTFDMITKKERLMLIREKDKLVRILGGIANMNRLPAALFVVDIKKEHIAVKEARSL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI A+VDTN +PD VDYVIP NDD+ RSI L VA ++ Sbjct: 181 GIPIFAMVDTNCDPDEVDYVIPANDDAIRSIDLMVKAVADTILEA 225 >gi|154487370|ref|ZP_02028777.1| hypothetical protein BIFADO_01220 [Bifidobacterium adolescentis L2-32] gi|209573725|sp|A1A1H9|RS2_BIFAA RecName: Full=30S ribosomal protein S2 gi|154083888|gb|EDN82933.1| hypothetical protein BIFADO_01220 [Bifidobacterium adolescentis L2-32] Length = 272 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 107/242 (44%), Positives = 158/242 (65%), Gaps = 5/242 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSAQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + G K+ Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERS---GKAAKAE 237 Query: 241 GE 242 GE Sbjct: 238 GE 239 >gi|325831938|ref|ZP_08165035.1| ribosomal protein S2 [Eggerthella sp. HGA1] gi|325486259|gb|EGC88711.1| ribosomal protein S2 [Eggerthella sp. HGA1] Length = 262 Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 99/229 (43%), Positives = 147/229 (64%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +S+ Sbjct: 1 MTKVSITSLLDAGSHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLVGLDQAYTFVSEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA + V +AA + VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 61 AKKGGTVLFVGTKKQAQEAVADAANKCGMPYVNARWLGGMLTNFVTIRSRVNRMEELEAM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE++ + ++ KL+ L+GIR+M PD +FV+DTNRE +AI E+R Sbjct: 121 ---EADGRMAVLPKKEQILLHKELSKLQTNLNGIRNMKRTPDAVFVIDTNREAIAIHESR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 RL IP+V +DTN +PD VD+ IP NDD+ RS+ L D +A A I G+ Sbjct: 178 RLDIPVVGTLDTNCDPDDVDFGIPANDDAIRSVRLLADFIADAVIAGVG 226 >gi|118442952|ref|YP_878222.1| 30S ribosomal protein S2 [Clostridium novyi NT] gi|166225264|sp|A0Q0S0|RS2_CLONN RecName: Full=30S ribosomal protein S2 gi|118133408|gb|ABK60452.1| ribosomal protein S2 [Clostridium novyi NT] Length = 233 Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 150/224 (66%), Gaps = 6/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSVVAD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E + RS + VN++WLGGM+TN+KT+ I KL LE++ + Sbjct: 64 GKEVLFVGTKKQAQEAIEEESLRSGMHFVNNRWLGGMLTNFKTIKTRINKLEQLEKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRLR 181 E+ F KKE + + +++KL++ L GI+++ +F+VD +EK AI EA+ L Sbjct: 122 EDGTFEVLPKKEVIKLRNEKEKLEKNLGGIKNLDASNLGAIFIVDPRKEKNAIDEAKNLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 182 IPVVAIVDTNCDPDEIDYVIPGNDDAIRAVRLITSKIADAIIEG 225 >gi|157364248|ref|YP_001471015.1| 30S ribosomal protein S2 [Thermotoga lettingae TMO] gi|167011239|sp|A8F717|RS2_THELT RecName: Full=30S ribosomal protein S2 gi|157314852|gb|ABV33951.1| ribosomal protein S2 [Thermotoga lettingae TMO] Length = 266 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 94/224 (41%), Positives = 147/224 (65%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGHR WNPKM YI+ R +IIDL +T+ ++++A + Sbjct: 1 MPVITMKQLLEAGVHFGHRTRRWNPKMAPYIYGARKGIYIIDLQKTLKLVEEACDFVKSK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++FV TK QA V E A + + VN++WLGG++TN+KT+ I KL +LEE+ Sbjct: 61 ASEGATMIFVGTKKQAQHVVKEEAGKCGAFYVNNRWLGGLITNFKTIKPRIDKLIELEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E KKE+ + + +KL++ L G++ M +PD+++V+D +E++A+ EA ++ Sbjct: 121 EKNGELAKLPKKEQSRLRKALEKLRKNLGGLKAMDRIPDIIYVIDPRKERIAVAEANKMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ VVDTN +PD VD+VIP NDD+ RSI L +A A ++G Sbjct: 181 IPVIGVVDTNCDPDPVDFVIPANDDAIRSIKLITSKIAEAYLEG 224 >gi|291296162|ref|YP_003507560.1| 30S ribosomal protein S2 [Meiothermus ruber DSM 1279] gi|290471121|gb|ADD28540.1| ribosomal protein S2 [Meiothermus ruber DSM 1279] Length = 243 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 94/220 (42%), Positives = 148/220 (67%), Gaps = 5/220 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I++LLE+GV FGH WNPKM+RYI+ ERN IIDL +++ L++ + + D RG Sbjct: 5 SIKELLEAGVHFGHETKRWNPKMKRYIYAERNGIFIIDLQKSMVELERTFKYVQDLAMRG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 IL+V TK QA + + + A R+ VN +WLGGM+TN++T++ + +L +LE L + Sbjct: 65 ATILYVGTKKQAQEIIQQEADRAGMPYVNQRWLGGMLTNFRTITAQVNRLAELEALFASD 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E + K E++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP++ Sbjct: 125 EIKERVKTEQVKLQHELERLQKNLGGFRKLRRLPDAIFVVDPTKEAIAVKEARKLGIPVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFC----DLVASA 221 A+ DT+S+PD+ DY+IPGNDD+ RSI L DL+ A Sbjct: 185 ALADTDSDPDVCDYIIPGNDDAIRSIQLIVSRMTDLIVEA 224 >gi|11467370|ref|NP_043227.1| ribosomal protein S2 [Cyanophora paradoxa] gi|1350887|sp|P48132|RR2_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S2 gi|1016171|gb|AAA81258.1| ribosomal protein S2 [Cyanophora paradoxa] Length = 233 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ ++LE+GV FGH++ WNPKM +YIF ERN HIIDL QT +L +A + + G Sbjct: 5 TLDEMLEAGVHFGHQSRRWNPKMSQYIFTERNGIHIIDLVQTAQLLAEAYDFLRISAEEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++LF+ TK QA++ + + A R + +N +WLGG +TNW T+ ++ L++LE +E Sbjct: 65 KKVLFIGTKRQAANIIAQEATRCGAFYINQRWLGGTLTNWTTIQSRVEYLKELE---MRE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ +KL+++L GI+ M +PD++ +VD RE A+QE ++L I Sbjct: 122 ESGALDLLPKKEAAILRRQLEKLRKSLGGIQTMRHIPDIVVIVDQKRENNAVQECKKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+A++DTNS+PD+VD IPGNDD+ RSI L +A A ++G Sbjct: 182 PIIALLDTNSDPDVVDIPIPGNDDAIRSIKLIIGKLADAILEG 224 >gi|317488432|ref|ZP_07946985.1| ribosomal protein S2 [Eggerthella sp. 1_3_56FAA] gi|316912476|gb|EFV34032.1| ribosomal protein S2 [Eggerthella sp. 1_3_56FAA] Length = 266 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 99/229 (43%), Positives = 147/229 (64%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +S+ Sbjct: 5 MTKVSITSLLDAGSHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLVGLDQAYTFVSEL 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA + V +AA + VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 65 AKKGGTVLFVGTKKQAQEAVADAANKCGMPYVNARWLGGMLTNFVTIRSRVNRMEELEAM 124 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE++ + ++ KL+ L+GIR+M PD +FV+DTNRE +AI E+R Sbjct: 125 ---EADGRMAVLPKKEQILLHKELSKLQTNLNGIRNMKRTPDAVFVIDTNREAIAIHESR 181 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 RL IP+V +DTN +PD VD+ IP NDD+ RS+ L D +A A I G+ Sbjct: 182 RLDIPVVGTLDTNCDPDDVDFGIPANDDAIRSVRLLADFIADAVIAGVG 230 >gi|320335236|ref|YP_004171947.1| 30S ribosomal protein S2 [Deinococcus maricopensis DSM 21211] gi|319756525|gb|ADV68282.1| ribosomal protein S2 [Deinococcus maricopensis DSM 21211] Length = 256 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 98/219 (44%), Positives = 143/219 (65%), Gaps = 5/219 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D RGG Sbjct: 5 MKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQIDRSFDYIKDLSERGG 64 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + V A+RS V S+WLGGM+TN++T+ I +L +L+++ Sbjct: 65 TILFVGTKKQAQEIVELEARRSGMPYVTSRWLGGMLTNFRTMRTRIDRLNELDDMFESGR 124 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K ER+ + +R++L R + GIR M +PD +FVVD +E +A+QEA +L IP++A Sbjct: 125 INDRPKAERIQLGNERERLLRYVGGIRKMTRMPDAIFVVDPTKEVIAVQEANKLGIPVIA 184 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFC----DLVASA 221 + DT+S+PD++DY++PGNDD+ RSI L DL+ A Sbjct: 185 LADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLIVEA 223 >gi|257413749|ref|ZP_04744070.2| ribosomal protein S2 [Roseburia intestinalis L1-82] gi|257202443|gb|EEV00728.1| ribosomal protein S2 [Roseburia intestinalis L1-82] gi|291538528|emb|CBL11639.1| SSU ribosomal protein S2P [Roseburia intestinalis XB6B4] Length = 242 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 146/218 (66%), Gaps = 1/218 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDIAAAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA D + A+R + VN +WLGGM+TN++T+ I +L+++E + Sbjct: 61 TILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFRTIQSRIARLKEIETMATDGT 120 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ IQEA L I ++ Sbjct: 121 FEVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICIQEAHTLGIKLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 218 >gi|171742884|ref|ZP_02918691.1| hypothetical protein BIFDEN_02001 [Bifidobacterium dentium ATCC 27678] gi|283456089|ref|YP_003360653.1| 30S ribosomal protein S2P [Bifidobacterium dentium Bd1] gi|306822700|ref|ZP_07456078.1| 30S ribosomal protein S2 [Bifidobacterium dentium ATCC 27679] gi|309800990|ref|ZP_07695122.1| ribosomal protein S2 [Bifidobacterium dentium JCVIHMP022] gi|171278498|gb|EDT46159.1| hypothetical protein BIFDEN_02001 [Bifidobacterium dentium ATCC 27678] gi|283102723|gb|ADB09829.1| rpsB SSU ribosomal protein S2P [Bifidobacterium dentium Bd1] gi|304554245|gb|EFM42154.1| 30S ribosomal protein S2 [Bifidobacterium dentium ATCC 27679] gi|308222526|gb|EFO78806.1| ribosomal protein S2 [Bifidobacterium dentium JCVIHMP022] Length = 272 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 158/243 (65%), Gaps = 5/243 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ A I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDAAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSSQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + G K+ Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERS---GKAAKAE 237 Query: 241 GET 243 GET Sbjct: 238 GET 240 >gi|225375360|ref|ZP_03752581.1| hypothetical protein ROSEINA2194_00985 [Roseburia inulinivorans DSM 16841] gi|225212849|gb|EEG95203.1| hypothetical protein ROSEINA2194_00985 [Roseburia inulinivorans DSM 16841] Length = 301 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 148/220 (67%), Gaps = 1/220 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A Sbjct: 59 ISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAMSDIAAE 118 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + + Sbjct: 119 GGTILFVGTKKQAQDAIKSEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIETMAAD 178 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + ++++ +KL++ L GI++M +PD +F+VD +E++ +QEA L I + Sbjct: 179 GTFEVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFIVDPKKERICVQEAHTLGITL 238 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 239 IGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIE 278 >gi|119025799|ref|YP_909644.1| 30S ribosomal protein S2 [Bifidobacterium adolescentis ATCC 15703] gi|118765383|dbj|BAF39562.1| 30S ribosomal protein S2 [Bifidobacterium adolescentis ATCC 15703] Length = 297 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 107/242 (44%), Positives = 158/242 (65%), Gaps = 5/242 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 26 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT 85 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 86 VAHNGTVLFVGTKKQAQEAVSAQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 145 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 146 DFTDVHGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 205 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + G K+ Sbjct: 206 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERS---GKAAKAE 262 Query: 241 GE 242 GE Sbjct: 263 GE 264 >gi|257790857|ref|YP_003181463.1| 30S ribosomal protein S2 [Eggerthella lenta DSM 2243] gi|257474754|gb|ACV55074.1| ribosomal protein S2 [Eggerthella lenta DSM 2243] Length = 278 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 99/229 (43%), Positives = 147/229 (64%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +S+ Sbjct: 5 MTKVSITSLLDAGSHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLVGLDQAYTFVSEL 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA + V +AA + VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 65 AKKGGTVLFVGTKKQAQEAVADAANKCGMPYVNARWLGGMLTNFVTIRSRVNRMEELEAM 124 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE++ + ++ KL+ L+GIR+M PD +FV+DTNRE +AI E+R Sbjct: 125 ---EADGRMAVLPKKEQILLHKELSKLQTNLNGIRNMKRTPDAVFVIDTNREAIAIHESR 181 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 RL IP+V +DTN +PD VD+ IP NDD+ RS+ L D +A A I G+ Sbjct: 182 RLDIPVVGTLDTNCDPDDVDFGIPANDDAIRSVRLLADFIADAVIAGVG 230 >gi|322386606|ref|ZP_08060231.1| 30S ribosomal protein S2 [Streptococcus cristatus ATCC 51100] gi|321269279|gb|EFX52214.1| 30S ribosomal protein S2 [Streptococcus cristatus ATCC 51100] Length = 260 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V E A+R+ QY +N +WLGG +TNW T+ + + +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVKEEAERAGQYYINHRWLGGTLTNWTTIQKRVARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M++VD ++E++A++EA++L Sbjct: 121 EEEGIFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYIVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEG 224 >gi|118411126|ref|YP_874520.1| 30S ribosomal protein S2 [Thalassiosira pseudonana] gi|224015736|ref|XP_002297516.1| RR2, ribosomal protein 2 [Thalassiosira pseudonana CCMP1335] gi|125987744|sp|A0T0Q8|RR2_THAPS RecName: Full=30S ribosomal protein S2, chloroplastic gi|116739873|gb|ABK20743.1| 30S ribosomal protein S2 [Thalassiosira pseudonana] gi|220967780|gb|EED86156.1| RR2, ribosomal protein 2 [Thalassiosira pseudonana CCMP1335] Length = 227 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 147/225 (65%), Gaps = 8/225 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + QLL++GV FGH+ + WNPKM YI+ ERNN HI+DL QT +L++A + + + Sbjct: 4 INLAQLLDAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQTAQLLKRANAYVQNAASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G LFV TK QAS + + AKR Y VN +WLGGM+TNW T+ I++L+ LE+ Sbjct: 64 GKTFLFVGTKRQASAVIAQEAKRCPSGYYVNHRWLGGMLTNWVTLKSRIERLKTLEQ--- 120 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E +G KKE ++ +KL++ L+G++DM LPD+ ++D RE AIQE R+L Sbjct: 121 QEVEGVFNLLPKKEASLRAKELEKLRKHLNGVKDMSKLPDVAIIIDQKREMTAIQECRKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+++++DTN +PDLVD IPGNDD+ RSI L + + ++ + G Sbjct: 181 GIPVISILDTNCDPDLVDIPIPGNDDAVRSIKLILNSLTNSIVQG 225 >gi|124516673|gb|EAY58181.1| ribosomal protein S2 [Leptospirillum rubarum] Length = 274 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 152/241 (63%), Gaps = 4/241 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++++LE+GV FGH+ WNPKM+R+I+ ERN +I+DL QTV + A + V Sbjct: 20 TLKEMLEAGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQTVRRFRVAREFAKSVVRNR 79 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 G ILFV TK QA + + A+R Y V +WLGGM+TN +TV +S+++L +EE++ Sbjct: 80 GSILFVGTKRQAQPIIQQEAQRCGMYFVTERWLGGMLTNLQTVRKSVERLNKIEEMMESG 139 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE +E++ +KL L+GIR + LP +FVVD +E +A+ EA RL IP++ Sbjct: 140 QISRLPKKEVAQLEKEHEKLASILNGIRGLSHLPAAIFVVDPKKEHIAVHEANRLGIPVI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG---ADTKSAGE 242 A+VDTN +PD++ + IP NDD+ RSI L +A A +DG G A ++S+G+ Sbjct: 200 AMVDTNCDPDMIQFPIPSNDDAIRSIRLITAGIADAVLDGALESQVQKGREAAVSESSGD 259 Query: 243 T 243 T Sbjct: 260 T 260 >gi|196230880|ref|ZP_03129741.1| ribosomal protein S2 [Chthoniobacter flavus Ellin428] gi|196225221|gb|EDY19730.1| ribosomal protein S2 [Chthoniobacter flavus Ellin428] Length = 241 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 97/203 (47%), Positives = 140/203 (68%), Gaps = 1/203 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LLE+GV FGH+ WNPKM+ YIF +RN +II+L +TV L +A +S R G++ Sbjct: 8 ELLEAGVHFGHQTKRWNPKMKPYIFEKRNAIYIINLGKTVEQLSEATDFLSTVAQRNGKV 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-ENQ 128 LFV K QA + + EAA S Q+ VN +WLGG +TN T+ +SI +++ +E L + E Sbjct: 68 LFVGCKKQAQEAIKEAAIASGQFYVNQRWLGGTLTNLATIRKSIARMKYIENLEKQSEYS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 K+E ++R+ +KLKR L+GIRDM LPD + V+DT RE +A+ EA+RL+IP VA+V Sbjct: 128 KMGKQEIAAVKREGEKLKRNLEGIRDMEKLPDAIVVIDTTREAIAVAEAKRLKIPTVAIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSI 211 DTN++P+L+ Y I GNDD+ R+I Sbjct: 188 DTNADPELISYPIAGNDDAIRAI 210 >gi|195942734|ref|ZP_03088116.1| 30S ribosomal protein S2 [Borrelia burgdorferi 80a] Length = 212 Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 94/209 (44%), Positives = 150/209 (71%), Gaps = 1/209 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + Sbjct: 4 ITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 64 GKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVD 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI Sbjct: 124 GTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 ++VVDTN NPD++D IPGNDD+ RS+AL Sbjct: 184 ISVVDTNCNPDVIDCPIPGNDDAIRSVAL 212 >gi|163786580|ref|ZP_02181028.1| 30S ribosomal protein S2 [Flavobacteriales bacterium ALC-1] gi|159878440|gb|EDP72496.1| 30S ribosomal protein S2 [Flavobacteriales bacterium ALC-1] Length = 266 Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 102/227 (44%), Positives = 148/227 (65%), Gaps = 5/227 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++LLE+GV FGH WNP M YI+ ERN HII+L +T +Q+ + ++ Sbjct: 1 MEKVEVKELLEAGVHFGHLTRKWNPNMAPYIYMERNGIHIINLYKTAAKIQETSEALAKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V E A Q + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGKKILFVATKKQAKDIVAEKAGAVNQPYITERWPGGMLTNFVTIRKAVKKMASIDRM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +KKERL + R R KL++ L I DM LP +FVVD RE +AI+EA++ Sbjct: 121 --KKDGTFNSLSKKERLQVNRLRAKLEKNLGSISDMTRLPGALFVVDIMREHIAIKEAQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 L IPI A+VDTNS+P VDYVIP NDD+S+SI +V+SA DG+ Sbjct: 179 LNIPIFAMVDTNSDPRQVDYVIPANDDASKSIQKVLSIVSSAIEDGL 225 >gi|304439989|ref|ZP_07399882.1| 30S ribosomal protein S2 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371481|gb|EFM25094.1| 30S ribosomal protein S2 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 251 Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 151/222 (68%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++ LLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A + + Sbjct: 5 SMKALLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKIEEAYDFVRELAEEN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA D + + A+R +N +WLGG++TN+KT+ + +++L +LEE+ +E Sbjct: 65 KTILFVGTKKQAQDAIEKEARRCEMPFINQRWLGGLLTNFKTIKKRVERLHNLEEM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + ++ +R++L++ L GI+ M LPD +FVVD +E +A++EA L IP Sbjct: 123 DGTFDVLPKKEVIKLKLERERLEKFLGGIKHMDRLPDCIFVVDPKKEYIAVKEADILGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V ++DTN +PD +DY IPGNDD+ R++ L + +A+A ++G Sbjct: 183 VVGIIDTNCDPDEIDYPIPGNDDAIRAVKLITETIANAVLEG 224 >gi|224540953|ref|ZP_03681492.1| hypothetical protein CATMIT_00104 [Catenibacterium mitsuokai DSM 15897] gi|224526104|gb|EEF95209.1| hypothetical protein CATMIT_00104 [Catenibacterium mitsuokai DSM 15897] Length = 279 Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 99/223 (44%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ L +A Q + + Sbjct: 1 MPVISMKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLKKSSDKLDEAYQAMKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA + V A+RS Y VNS+WLGG +TN+KT+ + I++L +LE++ Sbjct: 61 AEKGGKVLFVGTKKQAQEAVQTEAERSGSYFVNSRWLGGTLTNFKTIQKRIKRLIELEKM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G +TKKE + + +++ KL+R L GI++M LP+ +FVVD E A+ EA+ Sbjct: 121 ---EEDGSLEQYTKKEAVLLMKEKAKLERNLGGIKEMKKLPNALFVVDPKVEHNAVAEAK 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 L IP+ +VDTN +PD VD+VIP NDD+ R++ L +A A Sbjct: 178 ILGIPVFGIVDTNCDPDEVDHVIPANDDAIRAVKLIVAAMADA 220 >gi|154500331|ref|ZP_02038369.1| hypothetical protein BACCAP_03998 [Bacteroides capillosus ATCC 29799] gi|150270836|gb|EDM98119.1| hypothetical protein BACCAP_03998 [Bacteroides capillosus ATCC 29799] Length = 241 Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 148/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL +TV L++A + + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAAYIYTERNGIYIIDLQKTVKKLEEAYNFVRELAQNG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA + + E A R Y VN++WLGGM+TN+KT+ + +L L+++ +E Sbjct: 65 QTLLFVGTKKQAQEAIKEEAGRCGGYYVNARWLGGMLTNFKTMRGRVDRLNQLKKM--QE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + KL++ L G+ +M LP +FVVD +E+ AI EAR+L IP Sbjct: 123 DGTFDMLPKKEVMKHLGEIAKLEKYLGGVVEMKKLPGALFVVDPRKERNAINEARKLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R+I L ++A+A ++G Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAIKLISSVMANAIMEG 224 >gi|313673375|ref|YP_004051486.1| SSU ribosomal protein s2p [Calditerrivibrio nitroreducens DSM 19672] gi|312940131|gb|ADR19323.1| SSU ribosomal protein S2P [Calditerrivibrio nitroreducens DSM 19672] Length = 267 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 96/225 (42%), Positives = 148/225 (65%), Gaps = 5/225 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM +Y+F +RN +IIDL +TV +A + D Sbjct: 1 MSHISMKSLLEAGVHFGHQTKRWNPKMSKYVFGKRNGIYIIDLQKTVQCFNQAYEFARDM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA + AA+R + ++++WLGG +TN++T+ I++L++LEE+ Sbjct: 61 SKQGAKFLFVGTKKQAQEATKGAAERCNSFYIHNRWLGGTLTNFETIKSRIKRLKELEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 F KKE I+++ DKL + L GI+DM +PD+MFV+D RE+ AI EA++L Sbjct: 121 FASGYINRFHKKEISMIKKEYDKLYKNLAGIKDMTDIPDVMFVIDIKREQNAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++A+VDTN +P+ VD+ IPGNDD+ ++ C L+A DGI Sbjct: 181 IPLIAIVDTNCDPEQVDFPIPGNDDAIKA----CQLIADRIADGI 221 >gi|332654217|ref|ZP_08419961.1| ribosomal protein S2 [Ruminococcaceae bacterium D16] gi|332517303|gb|EGJ46908.1| ribosomal protein S2 [Ruminococcaceae bacterium D16] Length = 240 Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 148/222 (66%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL +TV L++A + + +G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMATYIYTERNGIYIIDLQKTVKKLEEAYNFVRELGEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV TK QA + + E A R Y VN++WLGGM+TN+KT+ + +L L+++ +E Sbjct: 65 ETLLFVGTKKQAQEAIKEEASRVGMYWVNARWLGGMLTNFKTMRGRVDRLNQLKKM--QE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE + + KL++ L G+ +M LP +FVVD +E+ AI EAR+L IP Sbjct: 123 DGTFDMLPKKEVMKHLGEIAKLEKYLGGVTEMKKLPGALFVVDPRKERNAINEARKLHIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA+VDTN +PD +DYVIPGNDD+ R+I L ++A+A +G Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAIKLISSVMANAIQEG 224 >gi|187778972|ref|ZP_02995445.1| hypothetical protein CLOSPO_02567 [Clostridium sporogenes ATCC 15579] gi|187772597|gb|EDU36399.1| hypothetical protein CLOSPO_02567 [Clostridium sporogenes ATCC 15579] Length = 233 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 150/224 (66%), Gaps = 6/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFLRSVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E AKRS + VN++WLGGM+TN+ T++ I KL +L+++ + Sbjct: 64 GKDVLFVGTKKQAQEAIEEEAKRSEMHFVNNRWLGGMLTNFTTITARINKLEELDKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRLR 181 E+ F KKE + ++ +R+KL++ L GIR + MFVVD +EK AI EA+RL Sbjct: 122 EDGTFEVLPKKEVIKLKNEREKLEKNLGGIRKLDADNVGAMFVVDPRKEKNAILEAKRLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A ++G Sbjct: 182 IPVVAIVDTNCDPDEVDFVIPGNDDAIRAVRLIAAKMADAVLEG 225 >gi|293375766|ref|ZP_06622037.1| ribosomal protein S2 [Turicibacter sanguinis PC909] gi|325841768|ref|ZP_08167462.1| ribosomal protein S2 [Turicibacter sp. HGF1] gi|292645635|gb|EFF63674.1| ribosomal protein S2 [Turicibacter sanguinis PC909] gi|325489887|gb|EGC92238.1| ribosomal protein S2 [Turicibacter sp. HGF1] Length = 244 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 143/225 (63%), Gaps = 11/225 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM++YIF RN +IIDL ++ + +A + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKQYIFTSRNGIYIIDLQKSSKKIDEAYAAMQEVTKD 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+++FV TK QA + + E A R QY VN +WLGG +TN+KT+ I +L LE + Sbjct: 64 GGKVVFVGTKKQAQEAIKEEAIRGGQYWVNQRWLGGTLTNFKTIQSRIARLEQLEAM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE +N+ ++ ++L + L GIR+M LP MFVVD E++AI EAR+L Sbjct: 121 EQDGTFEVLPKKEVINLRKEMERLNKFLGGIREMKELPAAMFVVDPRSERIAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+ +VDTN +PD VDYVIP NDD+ R++ L+ +DGI Sbjct: 181 IPVFGIVDTNCDPDDVDYVIPANDDAIRAVR----LIVGKMVDGI 221 >gi|148380393|ref|YP_001254934.1| ribosomal protein S2 [Clostridium botulinum A str. ATCC 3502] gi|153933792|ref|YP_001384610.1| 30S ribosomal protein S2 [Clostridium botulinum A str. ATCC 19397] gi|153936674|ref|YP_001388127.1| 30S ribosomal protein S2 [Clostridium botulinum A str. Hall] gi|153940104|ref|YP_001391733.1| 30S ribosomal protein S2 [Clostridium botulinum F str. Langeland] gi|168180684|ref|ZP_02615348.1| ribosomal protein S2 [Clostridium botulinum NCTC 2916] gi|168184642|ref|ZP_02619306.1| 30S ribosomal protein S2 [Clostridium botulinum Bf] gi|170754471|ref|YP_001781978.1| 30S ribosomal protein S2 [Clostridium botulinum B1 str. Okra] gi|170760079|ref|YP_001787747.1| 30S ribosomal protein S2 [Clostridium botulinum A3 str. Loch Maree] gi|226949788|ref|YP_002804879.1| ribosomal protein S2 [Clostridium botulinum A2 str. Kyoto] gi|237795871|ref|YP_002863423.1| 30S ribosomal protein S2 [Clostridium botulinum Ba4 str. 657] gi|166225261|sp|A7FPZ8|RS2_CLOB1 RecName: Full=30S ribosomal protein S2 gi|166225262|sp|A5I4L3|RS2_CLOBH RecName: Full=30S ribosomal protein S2 gi|166225263|sp|A7GG23|RS2_CLOBL RecName: Full=30S ribosomal protein S2 gi|229470511|sp|B1II66|RS2_CLOBK RecName: Full=30S ribosomal protein S2 gi|238688519|sp|B1KWM5|RS2_CLOBM RecName: Full=30S ribosomal protein S2 gi|254764468|sp|C1FSK5|RS2_CLOBJ RecName: Full=30S ribosomal protein S2 gi|259494991|sp|C3L0D3|RS2_CLOB6 RecName: Full=30S ribosomal protein S2 gi|148289877|emb|CAL83985.1| 30S ribosomal protein S2 [Clostridium botulinum A str. ATCC 3502] gi|152929836|gb|ABS35336.1| 30S ribosomal protein S2 [Clostridium botulinum A str. ATCC 19397] gi|152932588|gb|ABS38087.1| 30S ribosomal protein S2 [Clostridium botulinum A str. Hall] gi|152936000|gb|ABS41498.1| 30S ribosomal protein S2 [Clostridium botulinum F str. Langeland] gi|169119683|gb|ACA43519.1| 30S ribosomal protein S2 [Clostridium botulinum B1 str. Okra] gi|169407068|gb|ACA55479.1| 30S ribosomal protein S2 [Clostridium botulinum A3 str. Loch Maree] gi|182668492|gb|EDT80471.1| ribosomal protein S2 [Clostridium botulinum NCTC 2916] gi|182672302|gb|EDT84263.1| 30S ribosomal protein S2 [Clostridium botulinum Bf] gi|226842424|gb|ACO85090.1| ribosomal protein S2 [Clostridium botulinum A2 str. Kyoto] gi|229261723|gb|ACQ52756.1| 30S ribosomal protein S2 [Clostridium botulinum Ba4 str. 657] gi|295319759|gb|ADG00137.1| 30S ribosomal protein S2 [Clostridium botulinum F str. 230613] gi|322806701|emb|CBZ04270.1| SSU ribosomal protein S2p (SAe) [Clostridium botulinum H04402 065] Length = 233 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 150/224 (66%), Gaps = 6/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFLRSVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E AKRS + VN++WLGGM+TN+ T++ I KL +L+++ + Sbjct: 64 GKDVLFVGTKKQAQEAIEEEAKRSEMHFVNNRWLGGMLTNFTTITARINKLEELDKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRLR 181 E+ F KKE + ++ +R+KL++ L GIR + MF+VD +EK AI EA+RL Sbjct: 122 EDGTFEVLPKKEVIKLKNEREKLEKNLGGIRKLDANNVGAMFIVDPRKEKNAILEAKRLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A ++G Sbjct: 182 IPVVAIVDTNCDPDEVDFVIPGNDDAIRAVRLIAAKMADAVLEG 225 >gi|225352152|ref|ZP_03743175.1| hypothetical protein BIFPSEUDO_03767 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157399|gb|EEG70738.1| hypothetical protein BIFPSEUDO_03767 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 274 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 158/243 (65%), Gaps = 5/243 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQINMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSNQAVRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVRGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + G K+ Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERS---GKAAKAE 237 Query: 241 GET 243 GET Sbjct: 238 GET 240 >gi|78777996|ref|YP_394311.1| 30S ribosomal protein S2 [Sulfurimonas denitrificans DSM 1251] gi|123768584|sp|Q30PK5|RS2_SULDN RecName: Full=30S ribosomal protein S2 gi|78498536|gb|ABB45076.1| SSU ribosomal protein S2P [Sulfurimonas denitrificans DSM 1251] Length = 259 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 145/222 (65%), Gaps = 1/222 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + ++ D A G Sbjct: 3 TMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 +LFV TK QA V +AA V+++WLGGM+TN+ T+ +SI+KL + E+ N Sbjct: 63 KTVLFVGTKKQARASVRDAAIACGMPYVDNRWLGGMLTNFPTIQKSIRKLDVISEMQENG 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L + R+++KL+ GIR+M LPD++FV+D +E +A+ EAR L IP+V Sbjct: 123 QIDLLTKKEALMLSRQKEKLESYFGGIRNMKKLPDMLFVMDAVKEHIAVLEARCLGIPVV 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 A +DTN +PDL+ Y IPGNDD+ RSI LFC + A +G A Sbjct: 183 APLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTEAINEGKA 224 >gi|325201145|gb|ADY96600.1| ribosomal protein S2 [Neisseria meningitidis H44/76] Length = 216 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 97/198 (48%), Positives = 138/198 (69%), Gaps = 1/198 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +YIF RN HI++L +T+PM Q A + + VA G +LFV TK QA D + E A R Sbjct: 1 MAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 + V+ +WLGGM+TN+KTV QSI++L + L N GF+KKE L ++R +KL+R Sbjct: 61 AGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLER 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 +L GI++M GLPD +FV+DT +K + EA +L IP++AVVDTN++PD V YVIPGNDDS Sbjct: 121 SLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDS 180 Query: 208 SRSIALFCDLVASAAIDG 225 +++I L+C +A A ++G Sbjct: 181 AKAIRLYCRGIADAVLEG 198 >gi|90994440|ref|YP_536930.1| ribosomal protein S2 [Porphyra yezoensis] gi|122232143|sp|Q1XDN8|RR2_PORYE RecName: Full=30S ribosomal protein S2, chloroplastic gi|90819004|dbj|BAE92373.1| 30S ribosomal protein S2 [Porphyra yezoensis] Length = 242 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 143/223 (64%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +LLE+GV FGH+ WNPKM YI+ ERN HIIDL QT +L +A ++I + G Sbjct: 5 TLAELLEAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTAQLLTEACELIKQASSDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++LF+ TK QA+ V + A+R Y VN +WLGGM+TNW T+ + +LR LEE ++ Sbjct: 65 KKVLFLGTKRQAAGIVAQEAQRCDSYYVNQRWLGGMLTNWVTIKSRVSRLRQLEE---QD 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ DKL++ L+GI++M LPD++ VVD RE AIQE +L I Sbjct: 122 KSGMIDQLPKKEAAVLRRELDKLRKHLNGIKNMTRLPDIVVVVDQKRETTAIQECLKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +P++++ IP NDD+ RSI L +A A DG Sbjct: 182 PTICILDTNCSPEIINIPIPANDDAIRSIKLIVGKIADAIYDG 224 >gi|86135103|ref|ZP_01053685.1| 30S ribosomal protein S2 [Polaribacter sp. MED152] gi|85821966|gb|EAQ43113.1| 30S ribosomal protein S2 [Polaribacter sp. MED152] Length = 286 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 106/250 (42%), Positives = 152/250 (60%), Gaps = 9/250 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I++LL+SGV FGH WNP M YI+ ERN HIIDL +T +++ + + Sbjct: 1 MANINIQELLDSGVHFGHLTRKWNPNMAPYIYTERNGVHIIDLYKTAAKIEETSEALKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA D V E AK + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 ANSGRKILFVATKKQAKDIVAEKAKAVNMPYITERWPGGMLTNFVTIRKAVKKMASIDRM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +K+E+L I R+R+KL++ L I DM LP +FV+D +E +A+ EA++ Sbjct: 121 --KQDGSFDALSKREKLQINRQREKLEKNLGSISDMTRLPGALFVIDIKKEHIAVAEAQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P LVDYVIP NDD+S+SI D V D IA S AD + Sbjct: 179 LNIPIFAMVDTNSDPRLVDYVIPANDDASKSI----DKVLGFVTDAIAEGLSERKADKEK 234 Query: 240 AGETVVHSKE 249 ET KE Sbjct: 235 GKETKAPKKE 244 >gi|212715795|ref|ZP_03323923.1| hypothetical protein BIFCAT_00696 [Bifidobacterium catenulatum DSM 16992] gi|212661162|gb|EEB21737.1| hypothetical protein BIFCAT_00696 [Bifidobacterium catenulatum DSM 16992] Length = 274 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 106/242 (43%), Positives = 158/242 (65%), Gaps = 5/242 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQINMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSNQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVRGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + G +K+ Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERS---GKASKAE 237 Query: 241 GE 242 GE Sbjct: 238 GE 239 >gi|304316878|ref|YP_003852023.1| ribosomal protein S2 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778380|gb|ADL68939.1| ribosomal protein S2 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 235 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + V+ Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIEEAYDFIKEVVSN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D V E A+R Y VN +WLGGM+TN+KT+ +++L++L+ + + Sbjct: 64 NGTVLFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNYKTIRSRVERLKELKRM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 E+ F KKE + ++++++KL++ L GI +M G+P ++FVVD +E +AI EA+ L I Sbjct: 122 EDGTFDVLPKKEVIKLKKEKEKLEKYLGGIENMNGIPSVLFVVDPKKEAIAIAEAKNLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIVA+VDTN +P+ VDY IPGNDD+ R++ L +A A I+ Sbjct: 182 PIVAIVDTNCDPEEVDYPIPGNDDAIRAVKLIASKIADAVIEA 224 >gi|297622137|ref|YP_003710274.1| 30S ribosomal protein S2 [Waddlia chondrophila WSU 86-1044] gi|297377438|gb|ADI39268.1| 30S ribosomal protein S2 [Waddlia chondrophila WSU 86-1044] Length = 290 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 109/271 (40%), Positives = 167/271 (61%), Gaps = 21/271 (7%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 L + TI+ LLE+G FGH+ WNPKM+R+IF ERN +IIDL++T+ ++ A +++ + Sbjct: 15 GLAEITIKNLLEAGAHFGHQTSRWNPKMKRFIFEERNGLYIIDLAKTLQQVRNAAEIVKE 74 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 V + ILFV TK QA V E A+ ++ V +WLGGM+TN T+ QSI+KL +E+ Sbjct: 75 CVKKHKSILFVGTKKQAKGVVKELAEECGEFYVCERWLGGMLTNLSTIRQSIKKLDRIEK 134 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +G TKKE + +++ KL + L G+R M LP L+ VVD ++E +A+ EA++L Sbjct: 135 QIAAGGEGLTKKELSLLTKEQLKLDKNLSGVRSMRKLPGLVVVVDPSKEHIAVAEAKKLG 194 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +PD +DYVI NDD+ +SI L + + D IA++ + M Sbjct: 195 IPVMGLVDTNCDPDPIDYVIACNDDALKSIKLIINTLT----DVIAKEKNEM-------- 242 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 +V KEG + EED + G+E+AV Sbjct: 243 -RLVSRKEGSE-EEDKKI-------GEEIAV 264 >gi|319937406|ref|ZP_08011813.1| 30S ribosomal protein S2 [Coprobacillus sp. 29_1] gi|319807772|gb|EFW04365.1| 30S ribosomal protein S2 [Coprobacillus sp. 29_1] Length = 288 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 149/224 (66%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + +A + D VA+ Sbjct: 4 ISMKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLKKSSDKIDEAYAAMMDIVAK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V A+RS + VNS+WLGG +TN+KT+ + I++L++LE++ Sbjct: 64 GGKVLFVGTKKQAQEAVQLEAQRSGSFYVNSRWLGGTLTNFKTIQKRIRRLKELEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + G FTKKE + +++++ KL++ L GI++M LP+ +FVVD E A+ EA+ L Sbjct: 121 DEDGTLELFTKKEAILLKKEQAKLEKNLGGIKEMRRLPNALFVVDPKVEHNAVAEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 181 IPVFGIVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADAVCEA 224 >gi|120434504|ref|YP_860201.1| 30S ribosomal protein S2 [Gramella forsetii KT0803] gi|166225275|sp|A0LXM8|RS2_GRAFK RecName: Full=30S ribosomal protein S2 gi|117576654|emb|CAL65123.1| 30S ribosomal protein S2 [Gramella forsetii KT0803] Length = 299 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 97/225 (43%), Positives = 151/225 (67%), Gaps = 5/225 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LL++GV FGH WNP M YI+ ERN HII+L ++ +Q+A ++ A G Sbjct: 7 VKELLDAGVHFGHLTRRWNPNMAPYIYMERNGIHIINLYKSAAKMQEAGDALAKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA + V E A+++ + +W GGM+TN+ T+ ++++K+ ++ + K++ Sbjct: 67 KILFVATKKQAKEIVAEQAEKANMPYITERWPGGMLTNFVTIRKAVKKMASIDRM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +KKERL ++R R KL++ L I DM LP +FVVDT RE +AI+EA +L IPI Sbjct: 125 GTFNSLSKKERLQVDRLRAKLEKNLGSISDMSRLPAALFVVDTTREHIAIKEAHKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 A+VDTNS+P VDY+IP NDD+S+SI+ VA + ++G++ + Sbjct: 185 FAMVDTNSDPREVDYLIPSNDDASKSISKVVSYVADSIVEGLSER 229 >gi|284039590|ref|YP_003389520.1| ribosomal protein S2 [Spirosoma linguale DSM 74] gi|283818883|gb|ADB40721.1| ribosomal protein S2 [Spirosoma linguale DSM 74] Length = 277 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 144/226 (63%), Gaps = 2/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LL++GV FGH W+P+M YIF E+N HIIDL++TV L +A I Sbjct: 1 MAQIEYKDLLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNKTVAALDEACNAIKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +++FVATK QA + V E A+R V +W GGM+TN+ T+ +S++K++ L+++ Sbjct: 61 VRSGRKVMFVATKKQAQEIVSEEARRLKMPYVTDRWQGGMLTNFATIRKSLKKMQTLDKM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E + K+ERL R ++KL+R L GI D+ LP +FVVD RE +A+ EA RL Sbjct: 121 LKDEETVKSIAKRERLTRSRDKEKLERVLGGIADLTRLPAALFVVDVKREHIAVAEAHRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+ A+ DTNSNP+ VD+ IP NDD+ +SI+L + A +G+ Sbjct: 181 GIPVFAMCDTNSNPEEVDFAIPANDDAYKSISLITLAIGKAIEEGL 226 >gi|194337369|ref|YP_002019163.1| ribosomal protein S2 [Pelodictyon phaeoclathratiforme BU-1] gi|194309846|gb|ACF44546.1| ribosomal protein S2 [Pelodictyon phaeoclathratiforme BU-1] Length = 255 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 143/226 (63%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + ++L +GV FGH W PKM+ YIF E+N HIIDL +TV + +AL+ + Sbjct: 1 MSHFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTVVLADEALKALEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + E A+R+ V +WLGGM+TN++T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKHIIAEQAERAGMPYVCERWLGGMLTNFQTIRQSIRRMNSIDRM 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 TKKERL + R+++KL R L GI M LP +F+VD +E +AI+EAR L Sbjct: 121 ATDGTYDMITKKERLMLGREKEKLMRILGGIATMTRLPAALFIVDIKKEHIAIKEARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+A+VDTN +P+LVD+VIP NDD+ RSI L VA I+ A Sbjct: 181 IPIIAMVDTNCDPELVDFVIPANDDAIRSIQLMVKAVADTVINARA 226 >gi|329296137|ref|ZP_08253473.1| 30S ribosomal protein S2 [Plautia stali symbiont] Length = 213 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 100/198 (50%), Positives = 139/198 (70%), Gaps = 1/198 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ +IF RN HII+L +TVPM +AL ++ +R G+ILFV TK A++ V E+A Sbjct: 1 MKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKGKILFVGTKRAAAEVVKESALS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKR 147 Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L R+ KL+ Sbjct: 61 CDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRARELAKLEN 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ Sbjct: 121 SLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDG 225 R+++L+ VA+ +G Sbjct: 181 IRAVSLYLTAVATTVREG 198 >gi|313886025|ref|ZP_07819763.1| ribosomal protein S2 [Porphyromonas asaccharolytica PR426713P-I] gi|332299459|ref|YP_004441380.1| ribosomal protein S2 [Porphyromonas asaccharolytica DSM 20707] gi|312924555|gb|EFR35326.1| ribosomal protein S2 [Porphyromonas asaccharolytica PR426713P-I] gi|332176522|gb|AEE12212.1| ribosomal protein S2 [Porphyromonas asaccharolytica DSM 20707] Length = 296 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 97/224 (43%), Positives = 144/224 (64%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + QLLE+G FGH WNP M YIF ERN HIIDL +TV + + ++I + Sbjct: 1 MSQVSFDQLLEAGAHFGHMPRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDECAEIIKNM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +ILFV TK QA D V E AK V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 ASSGKKILFVGTKRQAKDAVAELAKSVGMPYVTERWPGGMLTNFPTIRKAVKKMAQIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+ERL ++R++ KL + L IRDM LP+ +FVVD RE +A++EA+RL Sbjct: 121 REDGTYNNLSKRERLQLDRQQAKLDKNLGSIRDMNRLPNALFVVDVMREHIAVREAQRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTN+NP +DYVIP NDDS+++I L + A +G Sbjct: 181 IPVFAIVDTNANPKDIDYVIPANDDSTQAIELIISAMCQAINEG 224 >gi|162319770|ref|YP_379943.2| 30S ribosomal protein S2 [Chlorobium chlorochromatii CaD3] gi|209573713|sp|Q3AQ25|RS2_CHLCH RecName: Full=30S ribosomal protein S2 Length = 251 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 138/224 (61%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + +L +GV FGH W PKM+ YIF E+N HIIDL +T + AL+ + Sbjct: 1 MSHFQVEDMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTAELANTALKALEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + E A RS V+ +WLGGM+TN++T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKVIIAEQATRSNMPYVSERWLGGMLTNFQTIRQSIRRMNSIDRM 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 TKKERL + R+R+KL R L GI M LP +FVVD +E LAI+EAR L Sbjct: 121 ATDGTYDMITKKERLMLGREREKLMRILGGIATMNRLPAALFVVDIKKEHLAIKEARTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDTN +P+LVDYVIP NDD+ RSI L VA I+ Sbjct: 181 IPVFAMVDTNCDPELVDYVIPANDDAIRSIQLMVKAVADTIINA 224 >gi|300865575|ref|ZP_07110354.1| 30S ribosomal protein S2 [Oscillatoria sp. PCC 6506] gi|300336447|emb|CBN55504.1| 30S ribosomal protein S2 [Oscillatoria sp. PCC 6506] Length = 269 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 140/223 (62%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ Q+LESGV FGH+ WNPKM YIF ERN HIIDL QT +++ A + + + +G Sbjct: 5 SLAQMLESGVHFGHQTRRWNPKMSPYIFTERNGVHIIDLVQTAQLMEDAYEYMREASEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + LFV TK QA+ V + A R Y VN +WLGGM+TNW T+ +++L+DLE +E Sbjct: 65 KKFLFVGTKRQAAGIVAQEAHRCGAYYVNQRWLGGMLTNWTTIKSRVERLKDLE---RRE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ KL++ L GI+ M +PD + +VD RE A+ E ++L I Sbjct: 122 ETGALDLLPKKEASTLRRELAKLQKYLGGIKSMRKIPDAVVLVDQRREYNAVLECQKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV+++DTN +PDLVD IP NDD+ RSI L +A A +G Sbjct: 182 PIVSLLDTNCDPDLVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|86608999|ref|YP_477761.1| 30S ribosomal protein S2 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123737998|sp|Q2JLB3|RS2_SYNJB RecName: Full=30S ribosomal protein S2 gi|86557541|gb|ABD02498.1| ribosomal protein S2 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 264 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 140/223 (62%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ QLLE+GV FGH+ WNPKM YIF ERN HIIDL QT L +A + + D RG Sbjct: 5 SLPQLLEAGVHFGHKASRWNPKMRPYIFTERNGIHIIDLVQTARYLNEAYEYVRDAADRG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QA+ + + A+R Y VN +WLGGM+TNW T+ I +L+++EE+ E Sbjct: 65 WRFLFVGTKRQAAGIIAQEARRCGSYYVNQRWLGGMLTNWATIKTRIDRLKEIEEM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G K+E + R+ +L++ L GI+ M LPD + +VD RE A+QE +L I Sbjct: 122 SSGLLDRLPKQEASRLRRELARLEKYLGGIKTMRKLPDAVIIVDQRREANAVQECIKLNI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI++++DTN +PDL D IP NDD+ R+I L +A A +G Sbjct: 182 PIISLLDTNCDPDLSDIFIPSNDDAIRAIKLIVGKLADAIYEG 224 >gi|307247539|ref|ZP_07529584.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856042|gb|EFM88200.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 208 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 100/208 (48%), Positives = 144/208 (69%), Gaps = 1/208 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSR 209 IP+ A+VDTNS PD V+Y+IPGNDD++R Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATR 208 >gi|108804235|ref|YP_644172.1| 30S ribosomal protein S2P [Rubrobacter xylanophilus DSM 9941] gi|123368165|sp|Q1AW68|RS2_RUBXD RecName: Full=30S ribosomal protein S2 gi|108765478|gb|ABG04360.1| SSU ribosomal protein S2P [Rubrobacter xylanophilus DSM 9941] Length = 306 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 IR+LLE+GV FGH+ WNPKM+RYIF ER HIIDL QT+ +L++AL I G Sbjct: 9 IRELLEAGVHFGHQAKRWNPKMKRYIFAERAGVHIIDLDQTLDLLERALNFIRGVAEAGQ 68 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LFV TK QA + E A R Q V +++GG++TN++T+ I+ + L + + Sbjct: 69 DVLFVGTKKQAQITIAEQAIRCGQPYVAERYIGGLLTNFRTIRPRIEYFKQLSREVEETP 128 Query: 128 QGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + + KE R+ KL+R GI +M LP ++VVD RE+L ++EA RLRIP+VA Sbjct: 129 EEERSGKEWFARLREYQKLRRNFAGITEMERLPGAVYVVDPKREELLVREANRLRIPVVA 188 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +PD++DYVIPGNDD+ RSI+L L+A A I+G Sbjct: 189 LTDTNCDPDVIDYVIPGNDDAIRSISLITRLIADAVIEG 227 >gi|302670755|ref|YP_003830715.1| ribosomal protein S2 RpsB [Butyrivibrio proteoclasticus B316] gi|302395228|gb|ADL34133.1| ribosomal protein S2 RpsB [Butyrivibrio proteoclasticus B316] Length = 246 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 155/241 (64%), Gaps = 11/241 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN HIIDL ++V + +A + + + +G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIHIIDLQKSVVKVDEAYKAVFEIAQQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D V A+R Y VN +WLGGM+TN+KT+ I +++ +E++ +E Sbjct: 65 GTILFVGTKKQAQDAVKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARMKAIEKM--QE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE ++++ KL+ L GIRDM +PD +FVVD +E++ IQEA L I Sbjct: 123 DGTFDVLPKKEVAMLKKELAKLQANLGGIRDMKRIPDAIFVVDPKKERICIQEAESLGIT 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ + DTN +P+ +D++IPGNDD+ R++ L +A A I+ + GA++ +A + Sbjct: 183 LIGIGDTNCDPEELDFIIPGNDDAIRAVKLIVGKMADAVIE------ANQGAESDAAADY 236 Query: 244 V 244 V Sbjct: 237 V 237 >gi|299830559|ref|YP_003735007.1| 30S ribosomal protein S2 [Durinskia baltica] gi|297384923|gb|ADI40222.1| 30S ribosomal protein S2 [Durinskia baltica] Length = 229 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 104/225 (46%), Positives = 143/225 (63%), Gaps = 9/225 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ QLLE+GV FGH+ WNPKM YI+ E NN HI+DL Q+ +L+ A + + Sbjct: 4 ISLSQLLEAGVHFGHKAHRWNPKMFPYIYSEVNNIHILDLVQSATLLKSANNFVELAASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 LFV TK QA+ + + AKRS Y VN +WLGGM+TNW TV + IQ+L+DLE+ + Sbjct: 64 NKTFLFVGTKRQATTLIAQEAKRSNSYYVNHRWLGGMLTNWATVKERIQRLKDLEK---Q 120 Query: 126 ENQG----FTKKERLNIERKR-DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G TKKE + I RK KL++ LDGI+ M PD+ ++D RE AI E R+L Sbjct: 121 EADGTFDLLTKKE-VAIRRKELSKLRKHLDGIKTMPDQPDVAIIIDQKREMTAILECRKL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V+++DTN +P+LVD IPGNDD+ RSI L + + + I G Sbjct: 180 GIPVVSILDTNCDPELVDVPIPGNDDAVRSIKLILNSLTDSIIKG 224 >gi|255530028|ref|YP_003090400.1| 30S ribosomal protein S2 [Pedobacter heparinus DSM 2366] gi|255343012|gb|ACU02338.1| ribosomal protein S2 [Pedobacter heparinus DSM 2366] Length = 274 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 98/225 (43%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH WNPKM YIF ERN HIIDL++T+ ++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWNPKMAPYIFMERNGIHIIDLNKTLTKTEEAASAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +ILFVATK QA + V + AK+ V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 61 VKSGRKILFVATKKQAKEIVADQAKKVNMPYVTERWLGGMLTNFATVRKSIKKMSNIDKM 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +KKERL I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTYSILSKKERLMIQRERIKLESLLGGIADLNRLPAAIFLIDVKKEHIAVSEALKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP A+VDTNS+P +D+ IP NDD+++SI+L D++ A +G+ Sbjct: 181 IPTFAMVDTNSDPSNIDFPIPANDDATKSISLITDVIIKAIEEGL 225 >gi|189345967|ref|YP_001942496.1| 30S ribosomal protein S2 [Chlorobium limicola DSM 245] gi|189340114|gb|ACD89517.1| ribosomal protein S2 [Chlorobium limicola DSM 245] Length = 256 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 101/227 (44%), Positives = 143/227 (62%), Gaps = 7/227 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 QF + ++L +GV FGH W PKM+ YIF E+N HIIDL +T+ + +AL+ + + Sbjct: 4 QFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTLVLADEALKALEAIAS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G I+FV TK QA + E A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 64 TGREIMFVGTKKQAKHIIAEEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIDRM-- 121 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G TKKERL + R+R+KL R L GI +M LP +F+VD +E +AI+EAR L Sbjct: 122 -ETDGTFDMITKKERLMLAREREKLMRILGGIANMTRLPAALFIVDIKKEHIAIKEARSL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI A+VDTN +P+ VDYVIP NDD+ RSI L A ++ A Sbjct: 181 GIPIFAMVDTNCDPETVDYVIPANDDAIRSIQLMVKAAAETVVNARA 227 >gi|158336564|ref|YP_001517738.1| 30S ribosomal protein S2 [Acaryochloris marina MBIC11017] gi|189044924|sp|B0C075|RS2_ACAM1 RecName: Full=30S ribosomal protein S2 gi|158306805|gb|ABW28422.1| 30S ribosomal protein S2 [Acaryochloris marina MBIC11017] Length = 298 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 148/238 (62%), Gaps = 8/238 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q+LESGV FGH+ WNPKM+ YIF ERN HIIDL QT ++ +A + Sbjct: 1 MPVISLAQMLESGVHFGHQARRWNPKMDPYIFTERNGVHIIDLVQTAQLMDEAYHYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ I++L+DLE Sbjct: 61 SESGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWTTIKTRIERLKDLER- 119 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ F K+E + R+ DKL++ L G++ M +PD++ ++D RE A+QE ++ Sbjct: 120 -RYESGIFDLLPKQEASMLRRELDKLQKYLGGLKQMHKIPDVVVIIDIRREYNAVQECQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 L +PIV+++DTN +PD VD IP NDD+ RSI L +A A +G +H + A+T Sbjct: 179 LGLPIVSLLDTNCDPDWVDIPIPANDDAIRSIKLIIGKLADAIYEG---RHGQVSAET 233 >gi|302874649|ref|YP_003843282.1| 30S ribosomal protein S2 [Clostridium cellulovorans 743B] gi|307690738|ref|ZP_07633184.1| 30S ribosomal protein S2 [Clostridium cellulovorans 743B] gi|302577506|gb|ADL51518.1| ribosomal protein S2 [Clostridium cellulovorans 743B] Length = 233 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 105/226 (46%), Positives = 144/226 (63%), Gaps = 10/226 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMATYIFTERNGIYIIDLQKTVKKIDEAYNFIRSVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + + E A RS+ + VNS+WLGGM+TN+ T+ I +L E LN Sbjct: 64 GKEVLFVGTKKQAQEAISEEAVRSSMHFVNSRWLGGMLTNFSTIKTRIARL----EALNT 119 Query: 126 ENQGFT-----KKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARR 179 Q T KKE N++ +++KL+R L GI +M +F+VD +EK AI EA++ Sbjct: 120 MEQDGTFEVLPKKEVANLKNEQEKLQRNLGGITNMNHENIGALFIVDPRKEKNAISEAKK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G Sbjct: 180 LGIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITAKIADAIIEG 225 >gi|326336082|ref|ZP_08202254.1| 30S ribosomal protein S2 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691591|gb|EGD33558.1| 30S ribosomal protein S2 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 242 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + A G Sbjct: 7 VKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEACEALKKIAASGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA D V E A ++ + +W GGM+TN+ T+ ++++K+ ++++ K++ Sbjct: 67 KILFVATKKQAKDIVAEKATSASMPYITERWPGGMLTNFVTIRKAVKKMSSIDKM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L++ R R+KL++ L I DM LP +FVVDT RE +A++EA++L IPI Sbjct: 125 GTYDTLSKKEKLHVTRLREKLEKNLGSIADMTRLPSALFVVDTLREHIAVREAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P VDYVIP NDD+SRSI V A +G+ Sbjct: 185 FAMVDTNSDPREVDYVIPANDDASRSIEKILSYVVEAIKEGL 226 >gi|149277342|ref|ZP_01883484.1| 30S ribosomal subunit protein S2 [Pedobacter sp. BAL39] gi|149232219|gb|EDM37596.1| 30S ribosomal subunit protein S2 [Pedobacter sp. BAL39] Length = 276 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 98/225 (43%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH WNPKM YIF ERN HIIDL++T+ ++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWNPKMAPYIFMERNGIHIIDLNKTLTKTEEAASAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +ILFVATK QA + V + AK+ V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 61 VKSGRKILFVATKKQAKEIVADQAKKVNMPFVTERWLGGMLTNFATVRKSIKKMSNIDKM 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +KKERL I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTYSILSKKERLMIQRERIKLESLLGGIADLNRLPAAIFLIDVKKEHIAVSEALKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP A+VDTNS+P +D+ IP NDD+++SI+L D++ A +G+ Sbjct: 181 IPTFAMVDTNSDPSNIDFPIPANDDATKSISLITDVIIKAIEEGL 225 >gi|146299370|ref|YP_001193961.1| 30S ribosomal protein S2 [Flavobacterium johnsoniae UW101] gi|189044939|sp|A5FJG9|RS2_FLAJO RecName: Full=30S ribosomal protein S2 gi|146153788|gb|ABQ04642.1| 30S ribosomal protein S2 [Flavobacterium johnsoniae UW101] Length = 254 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 150/226 (66%), Gaps = 5/226 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++LLE+GV FGH W+P M YI+ ERN HII+L +T +++A + + A Sbjct: 4 KIEVKELLEAGVHFGHMTRKWDPNMAPYIYMERNGIHIINLYKTAAKIEEANEALKKIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +ILFVATK QA D V + AK + + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 64 SGRKILFVATKKQAKDIVADKAKAANMPYITERWPGGMLTNFVTIRKAVKKMSSIDKM-- 121 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ F +KKERL ++R R KL++ L I DM LP +FVVD E +AI+EA++L Sbjct: 122 KKDGTFNTLSKKERLQVDRLRAKLEKNLGSIADMSRLPAALFVVDIKAEHIAIKEAQKLN 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+ A+VDTNS+P VDYVIP NDD+S+SI LV +A I+G++ Sbjct: 182 IPVFAMVDTNSDPREVDYVIPANDDASKSIDKILSLVTTAVIEGLS 227 >gi|51209981|ref|YP_063645.1| ribosomal protein S2 [Gracilaria tenuistipitata var. liui] gi|68052931|sp|Q6B8R5|RR2_GRATL RecName: Full=30S ribosomal protein S2, chloroplastic gi|50657735|gb|AAT79720.1| 30S ribosomal protein S2 [Gracilaria tenuistipitata var. liui] Length = 231 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 139/223 (62%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +LLE+G FGH+ WNP+M YI+ ERN HIIDL QT +L +A Q I D G Sbjct: 5 SLSELLEAGAHFGHQARRWNPRMFPYIYTERNGIHIIDLVQTAQLLTEACQFIRDASQEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + LF+ TK QA+ + E A RS Y VN +WLGGM+TNW T+ +++L+ LE E Sbjct: 65 KKFLFLGTKRQAAGVIAEQAIRSNSYYVNQRWLGGMLTNWMTIKSRVERLQRLEM---DE 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE R+ DKL++ L+GI++M LPD + VVD RE AIQE +L I Sbjct: 122 QAGLIDMLPKKEAAINRRELDKLRKNLNGIKNMSRLPDFIVVVDQKRETTAIQECIKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+ ++DTN NP+++D IP NDD+ RSI L +A + I+G Sbjct: 182 PIICILDTNCNPEIIDIPIPANDDAIRSIKLIISRIADSIIEG 224 >gi|194334609|ref|YP_002016469.1| 30S ribosomal protein S2 [Prosthecochloris aestuarii DSM 271] gi|194312427|gb|ACF46822.1| ribosomal protein S2 [Prosthecochloris aestuarii DSM 271] Length = 253 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 103/232 (44%), Positives = 148/232 (63%), Gaps = 9/232 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +F++ +L +GV FGH W PKM+ +IF E+N HIIDL +T+ M + A++ I Sbjct: 6 MSRFSLEDMLRAGVHFGHLARRWCPKMKPFIFMEKNGVHIIDLKKTLYMAEDAMKAIDAI 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + + A+R+ V+ +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 66 ALTGKEIMFVGTKKQAKNIISAEAERAGMPFVSERWLGGMLTNFSTIRQSIRRMNAIDRM 125 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G TKKERL + R++DKL R L GI +M LP +F+VD +E +AI+EAR Sbjct: 126 ---ETDGTFDMITKKERLMLMREKDKLFRILGGISNMTRLPAALFIVDIKKEHIAIKEAR 182 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 L IPI A+VDTN +PD VDYVIP NDD+ RSI L VA + ++ ARQ Sbjct: 183 SLGIPIFALVDTNCDPDEVDYVIPANDDAIRSIELMVKAVADSILN--ARQQ 232 >gi|239617911|ref|YP_002941233.1| ribosomal protein S2 [Kosmotoga olearia TBF 19.5.1] gi|239506742|gb|ACR80229.1| ribosomal protein S2 [Kosmotoga olearia TBF 19.5.1] Length = 275 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 90/220 (40%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++QLLE+GV FGHR WNPKM+ YI+ ER +IIDL +T+ +L + + + G Sbjct: 5 TMKQLLEAGVHFGHRTRRWNPKMKPYIYGERKGIYIIDLQKTLKLLDQTYDYVRERAREG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +FV TK QA + AKR VN++WLGG++TN+ T+ + I+ L+ EE+ ++ Sbjct: 65 ATFMFVGTKRQAQQIIENEAKRCGAAYVNNRWLGGLLTNFTTIRKRIEVLKQYEEMEISG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E KKE+ I +K +KL++ L+G++DM +PD+++VVD +E++A+ EA +L I ++ Sbjct: 125 ELDALPKKEQSRIRKKLEKLRKNLNGVKDMERIPDVIYVVDPKKEEIAVAEANKLGITVI 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +PD++DY++PGNDD+ R+I L +A A ++G Sbjct: 185 GIADTNCDPDVLDYLVPGNDDAIRAIQLITRTIADAILEG 224 >gi|297568945|ref|YP_003690289.1| ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2] gi|296924860|gb|ADH85670.1| ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2] Length = 255 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 95/228 (41%), Positives = 147/228 (64%), Gaps = 9/228 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LE+G+ FGH+ WNPKM+ YIF RN +II+L +T+P+ KA D Sbjct: 1 MSHVNMKEMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFNKACDAARDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG ILFV TK QA + + E A R + V+ +WLGGM+TN +T+ +S+ +L+ + Sbjct: 61 AAKGGNILFVGTKRQAQEIIREEATRCGMFYVDHRWLGGMLTNHQTIKKSVDRLKAYTSM 120 Query: 123 -----LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +N+ + KKE L I+++ KL+R L GI++M LP +FVVD RE +A+ EA Sbjct: 121 QEDGSINR----YKKKEILMIQKETIKLERNLGGIKEMKTLPAAIFVVDPKRESIAVTEA 176 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 RL IP+ A+ DTN +P+ ++++IPGNDD+ +SI L +A A +DG Sbjct: 177 NRLGIPVFAIADTNCDPEGINHLIPGNDDAIKSIRLVSAKLADAILDG 224 >gi|328955479|ref|YP_004372812.1| SSU ribosomal protein S2P [Coriobacterium glomerans PW2] gi|328455803|gb|AEB06997.1| SSU ribosomal protein S2P [Coriobacterium glomerans PW2] Length = 274 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + + LLE+G FGH+ W+PKM+ YIF ERN +I+DL QT+ +A + VA Sbjct: 4 KINVHTLLEAGCHFGHQTRRWDPKMKPYIFGERNGIYILDLKQTIINADQAYSFVK-RVA 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + G++L V TK QA + V AA+R+ +N +WLGGM+TN+ T+ I ++ +LE ++ Sbjct: 63 KSGKLLIVGTKKQAQEAVRTAAERAGMPYINQRWLGGMLTNFMTIRSRIDRMEELETMVE 122 Query: 125 KENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE+ + ++ KL+ L G RD+ GLP +FV+DT RE+ AI+EARRL IP Sbjct: 123 DGRMAVLPKKEQAVLGKQLSKLQTNLGGARDLKGLPQALFVIDTKREENAIREARRLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH----SYMGADTKS 239 +VA++DTNS+PD V Y IP NDD+ SI L C+L+A A G ++ MG S Sbjct: 183 VVALIDTNSDPDEVTYGIPCNDDAISSITLMCELIADACQAGSGKEEISESEMMGEPAPS 242 Query: 240 AGE 242 A E Sbjct: 243 ASE 245 >gi|18310682|ref|NP_562616.1| 30S ribosomal protein S2 [Clostridium perfringens str. 13] gi|110800337|ref|YP_696387.1| 30S ribosomal protein S2 [Clostridium perfringens ATCC 13124] gi|110803157|ref|YP_698987.1| 30S ribosomal protein S2 [Clostridium perfringens SM101] gi|168215350|ref|ZP_02640975.1| ribosomal protein S2 [Clostridium perfringens CPE str. F4969] gi|168216987|ref|ZP_02642612.1| ribosomal protein S2 [Clostridium perfringens NCTC 8239] gi|169342723|ref|ZP_02863764.1| ribosomal protein S2 [Clostridium perfringens C str. JGS1495] gi|25009207|sp|Q8XJQ6|RS2_CLOPE RecName: Full=30S ribosomal protein S2 gi|123146052|sp|Q0SSC0|RS2_CLOPS RecName: Full=30S ribosomal protein S2 gi|123344669|sp|Q0TPQ3|RS2_CLOP1 RecName: Full=30S ribosomal protein S2 gi|18145363|dbj|BAB81406.1| 30S ribosomal protein S2 [Clostridium perfringens str. 13] gi|110674984|gb|ABG83971.1| 30S ribosomal protein S2 [Clostridium perfringens ATCC 13124] gi|110683658|gb|ABG87028.1| 30S ribosomal protein S2 [Clostridium perfringens SM101] gi|169299229|gb|EDS81299.1| ribosomal protein S2 [Clostridium perfringens C str. JGS1495] gi|170713264|gb|EDT25446.1| ribosomal protein S2 [Clostridium perfringens CPE str. F4969] gi|182380953|gb|EDT78432.1| ribosomal protein S2 [Clostridium perfringens NCTC 8239] Length = 233 Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 104/225 (46%), Positives = 145/225 (64%), Gaps = 8/225 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKAEEAYNFIREVSEA 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++FV TK QA + V E A+RS Y VN +WLGGM+TN+ T+ I +L L+E+ Sbjct: 64 GKDVIFVGTKKQAQEAVKEEAERSNMYFVNHRWLGGMLTNFTTIKTRINRLNKLDEM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 E G KKE + ++ +R+KL+R L GI+++ MFVVD +EK AI EA+ L Sbjct: 121 EQDGTFDVLPKKEVIKLKLEREKLQRNLGGIKELDASNIGAMFVVDPRKEKNAIAEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A I+G Sbjct: 181 GIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLIAGKMADAIIEG 225 >gi|220909599|ref|YP_002484910.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 7425] gi|254764471|sp|B8HXK4|RS2_CYAP4 RecName: Full=30S ribosomal protein S2 gi|219866210|gb|ACL46549.1| ribosomal protein S2 [Cyanothece sp. PCC 7425] Length = 260 Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 140/227 (61%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q+LE+GV FGH+ WNPKM YIF ERN HIIDL QT ++ +A + + Sbjct: 1 MPVLSLAQMLEAGVHFGHQARRWNPKMSPYIFTERNGVHIIDLVQTAQLMDEAYEYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LF+ TK QA+ V A+R Y +N +WLGGM+TNW T+ +++L++LE Sbjct: 61 SEEGKRFLFIGTKRQAAGLVAHEAQRCGSYFINQRWLGGMLTNWTTIKTRVERLKELE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++ G K+E + R+ +KL++ L GI+ M LPD++ +VD RE A+QE Sbjct: 119 -RRQETGALDLLPKQEASMLRREMEKLQKYLGGIKQMRKLPDVVLIVDVRREYNAVQECH 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPIV+++DTN +PD VD IP NDD+ RSI L +A +G Sbjct: 178 KLGIPIVSLLDTNCDPDEVDIPIPANDDAIRSIKLIVGKLADGIYEG 224 >gi|156743847|ref|YP_001433976.1| 30S ribosomal protein S2 [Roseiflexus castenholzii DSM 13941] gi|209573678|sp|A7NQW2|RS2_ROSCS RecName: Full=30S ribosomal protein S2 gi|156235175|gb|ABU59958.1| ribosomal protein S2 [Roseiflexus castenholzii DSM 13941] Length = 263 Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 107/226 (47%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLESG FGH+ WNPKM YIF RN HIIDL +T+ L +A Q I +TVA G Sbjct: 10 SMRALLESGAHFGHQTKRWNPKMRPYIFTARNGIHIIDLQKTITGLTEAYQFIVETVAAG 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK- 125 ++LFV TK QA + + E A R+ Q V +WLGG +TN+ T+ + ++ L +LEE + Sbjct: 70 NKVLFVGTKKQAQETIAEEATRADQLYVIQRWLGGTLTNFVTIRKRLRYLINLEEQRARG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E TK E L + + +KL + GI+ M LP +F+VD ++E LA++EA ++ IPIV Sbjct: 130 EFNKLTKAEALKRDAEIEKLNKIFGGIKTMDRLPGALFIVDPHKEDLAVKEANKVGIPIV 189 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 A+VDTN +PDL+DYVIP NDD+ RSI L +A AAI+G R+ S Sbjct: 190 AMVDTNCDPDLIDYVIPCNDDAIRSIRLIAAKIADAAIEGRNRRES 235 >gi|86606296|ref|YP_475059.1| 30S ribosomal protein S2 [Synechococcus sp. JA-3-3Ab] gi|123724576|sp|Q2JU28|RS2_SYNJA RecName: Full=30S ribosomal protein S2 gi|86554838|gb|ABC99796.1| ribosomal protein S2 [Synechococcus sp. JA-3-3Ab] Length = 267 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 140/224 (62%), Gaps = 9/224 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ QLLE+GV FGH+ WNPKM YIF ERN HIIDL QT L +A + + + +G Sbjct: 5 SLPQLLEAGVHFGHKASRWNPKMRPYIFAERNGIHIIDLVQTARYLNEAYEYVREGAEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE----- 121 R LFV TK QA+ + A R Y VN +WLGGM+TNW T+ I +L+++EE Sbjct: 65 WRFLFVGTKRQAAGIIAHEATRCGSYYVNQRWLGGMLTNWATIKTRIDRLKEIEEMQSSG 124 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LL++ K+E ++R+ KL++ L GI+ M LPD + +VD RE A+QE +L+ Sbjct: 125 LLDR----LPKQEAARLKRELAKLEKYLGGIKTMRKLPDAVIIVDQRREANAVQECIKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI++++DTN +PDL D IP NDD+ R+I L +A A +G Sbjct: 181 IPIISLLDTNCDPDLSDVFIPSNDDAIRAIKLIVGKLADAIYEG 224 >gi|149072059|ref|YP_001293550.1| 30S ribosomal protein S2 [Rhodomonas salina] gi|209573644|sp|A6MVX1|RR2_RHDSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|134303010|gb|ABO70814.1| 30S ribosomal protein S2 [Rhodomonas salina] Length = 243 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 144/223 (64%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +LLE+GV FGH++ WNPKM YI+ ERN HIIDL QT +L +A + +G Sbjct: 5 TLAELLEAGVHFGHQSRRWNPKMFPYIYAERNGIHIIDLVQTAQLLTQACDFVRTASEQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 LFV TK QA+ V + A+R Y VN +WLGG++TNW T+ +++L+DLE NKE Sbjct: 65 KSFLFVGTKRQAAAVVAQEAERCGAYYVNQRWLGGILTNWFTIRTRVERLKDLE---NKE 121 Query: 127 NQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G+ KKE + R+ +KL++ LDGI+ M LPDL+ VVD RE A+QE R+L I Sbjct: 122 ESGYLDQLPKKETAILRRELEKLRKNLDGIKTMKRLPDLVVVVDQKRESTAVQECRKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV+++DTN NP+L D IP NDD+ RSI L +A + +G Sbjct: 182 PIVSILDTNCNPELADIPIPANDDAIRSIKLILGKIADSISEG 224 >gi|243181|gb|AAB21092.1| ribosomal protein S2 [Bacillus stearothermophilus, Peptide, 234 aa] Length = 234 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 92/235 (39%), Positives = 157/235 (66%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FG + WNPKM++YIF ERN ++ID+ +TV +++A + + A Sbjct: 3 ISMKQLLEAGVHFGWQTRRWNPKMKKYIFTERNGIYLIDIQKTVKKVEEAYNFVRELAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN + +GG +TN+ T+ + I++LR++E++ Sbjct: 63 GGKILFVGTKRQAQESVKEEAERCGMFYVNQRRIGGTLTNFATLQKRIKRLREIEKM--- 119 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ + GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 120 EEDGVFDVLPKKEVIGLKKEKERLEKFIGGIKDMKELPDALFVIDPRKERIAVAEARKLN 179 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN++P YVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 180 IPIIGIVDTNNDPCEGGYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 234 >gi|11467570|ref|NP_043716.1| ribosomal protein S2 [Odontella sinensis] gi|1350888|sp|P49490|RR2_ODOSI RecName: Full=30S ribosomal protein S2, chloroplastic gi|1185265|emb|CAA91748.1| 30S ribosomal protein S2 [Odontella sinensis] Length = 229 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 136/209 (65%), Gaps = 1/209 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ QLLE+GV FGH+ + WNPKM YI+ ERNN HI+DL Q+ +L++A + + Sbjct: 4 ITLAQLLEAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQSAQLLKEANSYLQSAAEK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G LF+ TK QAS + + AKR Y VN +WLGGM+TNW T+ I +L+ LE+ Sbjct: 64 GQTFLFIGTKPQASALIAQEAKRCNSYYVNHRWLGGMLTNWVTLKSRIARLKTLEQEEAD 123 Query: 126 ENQGFTKKERLNIERKR-DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + K+ ++ RK +KL++ L+GI+DM LPD+ V+D RE A+ E R+L IPI Sbjct: 124 QVFNLLPKKEASLRRKELEKLRKNLNGIKDMEKLPDVAIVIDQKREMTAVIECRKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 ++++DTN +PDLVD IPGNDD+ SI L Sbjct: 184 ISILDTNCDPDLVDIPIPGNDDAVGSIKL 212 >gi|18272396|sp|P81289|RS2_BACST RecName: Full=30S ribosomal protein S2; AltName: Full=BS2a Length = 235 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 92/235 (39%), Positives = 157/235 (66%), Gaps = 7/235 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FG + WNPKM++YIF ERN ++ID+ +TV +++A + + A Sbjct: 4 ISMKQLLEAGVHFGWQTRRWNPKMKKYIFTERNGIYLIDIQKTVKKVEEAYNFVRELAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG+ILFV TK QA + V E A+R + VN + +GG +TN+ T+ + I++LR++E++ Sbjct: 64 GGKILFVGTKRQAQESVKEEAERCGMFYVNQRRIGGTLTNFATLQKRIKRLREIEKM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + +++++++L++ + GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGVFDVLPKKEVIGLKKEKERLEKFIGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN++P YVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNNDPCEGGYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|1518660|gb|AAB07069.1| ribosomal protein S2 [Chlamydia muridarum] Length = 281 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/259 (38%), Positives = 157/259 (60%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I TV Sbjct: 6 ELTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLAQLKKAVSCIQKTVE 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L ++E L Sbjct: 66 QGKSILFVGTKKQAKQIIKEAAIECGEFFASERWLGGMLTNMATIRNSVKTLNNIEIDLA 125 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N TKKE + ++ KL L+G+R M LP L+ V+D E++A++EA +L IP+ Sbjct: 126 SSNSVLTKKETALLAKRHRKLLNNLEGVRHMNSLPGLLVVIDPGYERIAVREAGKLGIPV 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 186 MALVDTNCDPTPINHVIPCNDDSIKSIRLIVNALKDAIIDTKKRSGFEILSPVRPIERPA 245 Query: 245 VHSKEGMQLEEDSQSSESS 263 EG+ L ++Q+ +S Sbjct: 246 EEIVEGLPLPNEAQNDANS 264 >gi|295132392|ref|YP_003583068.1| 30S ribosomal protein S2 [Zunongwangia profunda SM-A87] gi|294980407|gb|ADF50872.1| 30S ribosomal protein S2 [Zunongwangia profunda SM-A87] Length = 294 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 97/230 (42%), Positives = 151/230 (65%), Gaps = 5/230 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++LL++GV FGH WNP M YI+ ERN HII+L ++ +Q+A + + A Sbjct: 4 KVEVKELLDAGVHFGHLTRRWNPNMAPYIYMERNGIHIINLYKSAAKMQEAGEALKKIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +ILFVATK QA + V E A+++ + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 64 SGRKILFVATKKQAKEIVAEQAEKANMPYITERWPGGMLTNFVTIRKAVKKMASIDRM-- 121 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ F +KKERL ++R R KL + L I DM LP +FVVD RE +AI+EA++L Sbjct: 122 KKDGTFNTLSKKERLQVDRLRAKLDKNLGSIADMTRLPGALFVVDITREHIAIKEAQKLN 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPI A+VDTNS+P VDYVIP NDD+S+SI V+ + ++G++ + S Sbjct: 182 IPIFAMVDTNSDPREVDYVIPANDDASKSINKVVSYVSESIVEGLSDRKS 231 >gi|110639411|ref|YP_679620.1| 30S ribosomal subunit protein S2 [Cytophaga hutchinsonii ATCC 33406] gi|123163262|sp|Q11QN6|RS2_CYTH3 RecName: Full=30S ribosomal protein S2 gi|110282092|gb|ABG60278.1| SSU ribosomal protein S2P [Cytophaga hutchinsonii ATCC 33406] Length = 254 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/256 (39%), Positives = 155/256 (60%), Gaps = 16/256 (6%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + LL++GV FGH WNPKM YIF E+N H+IDL++T+ L +A + V G + Sbjct: 8 KDLLDAGVHFGHLTRKWNPKMAPYIFMEKNGIHLIDLNKTLVCLDEANAALKTIVRSGRK 67 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN- 127 +LFVATK QA + V AKR +WLGGM+TN+ TV +S++K+ +E+++ E Sbjct: 68 VLFVATKKQAQEVVTAEAKRLKMPYATERWLGGMLTNFATVRKSLKKMSSMEKMMKDEAF 127 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KKERL + R+++KL++ L GI D+ LP +FVVD +E +AI EA++L IP+ A+ Sbjct: 128 SSLNKKERLVLSREKEKLEKVLGGIADLTRLPAAIFVVDVKKEHIAIAEAKKLGIPVFAI 187 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 VDTNS+P +VD+ IP NDD+ +SI++ + D ++ + Sbjct: 188 VDTNSDPTIVDFPIPANDDAFKSISILTQAIGQGIEDALSERK---------------RE 232 Query: 248 KEGMQLEEDSQSSESS 263 K+ +L+ED +S ++S Sbjct: 233 KDDAKLKEDEESKKAS 248 >gi|225011205|ref|ZP_03701665.1| ribosomal protein S2 [Flavobacteria bacterium MS024-3C] gi|225004666|gb|EEG42628.1| ribosomal protein S2 [Flavobacteria bacterium MS024-3C] Length = 327 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/241 (41%), Positives = 151/241 (62%), Gaps = 5/241 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + A Sbjct: 4 KIEVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEANEALKKIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +ILFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 64 SGRKILFVATKKQAKDIVAEKAANVNMPYITERWPGGMLTNFITIRKAVKKMATIDRM-- 121 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ F +KKERL ++R R KL++ L I DM LP +FVVDT RE +A++EA +L Sbjct: 122 KKDGTFLTLSKKERLQVDRLRAKLEKNLGSISDMTRLPGALFVVDTMREHIAVKEALKLN 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTNS+P +DYVIP NDD+S+SI V A +G++ + S A+ + A Sbjct: 182 IPIFAMVDTNSDPKQIDYVIPSNDDASKSIEAILAHVTGAVAEGLSERKSEKLAEKEGAS 241 Query: 242 E 242 + Sbjct: 242 D 242 >gi|15834676|ref|NP_296435.1| 30S ribosomal protein S2 [Chlamydia muridarum Nigg] gi|7404454|sp|P71145|RS2_CHLMU RecName: Full=30S ribosomal protein S2 gi|7190090|gb|AAF38940.1| ribosomal protein S2 [Chlamydia muridarum Nigg] Length = 281 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/259 (38%), Positives = 156/259 (60%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I TV Sbjct: 6 ELTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLAQLKKAVSCIQKTVE 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L ++E L Sbjct: 66 QGKSILFVGTKKQAKQIIKEAAIECGEFFASERWLGGMLTNMATIRNSVKTLNNIEIDLA 125 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA +L IP+ Sbjct: 126 SSNSVLTKKETALLAKRHRKLLNNLEGVRHMNSLPGLLVVIDPGYERIAVAEAGKLGIPV 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 186 MALVDTNCDPTPINHVIPCNDDSIKSIRLIVNALKDAIIDTKKRSGFEILSPVRPIERPA 245 Query: 245 VHSKEGMQLEEDSQSSESS 263 EG+ L ++Q+ +S Sbjct: 246 EEIVEGLPLPNEAQNDANS 264 >gi|325105873|ref|YP_004275527.1| SSU ribosomal protein S2P [Pedobacter saltans DSM 12145] gi|324974721|gb|ADY53705.1| SSU ribosomal protein S2P [Pedobacter saltans DSM 12145] Length = 270 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 96/221 (43%), Positives = 145/221 (65%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T + LL++GV FGH WNPKM +YIF ERN HIIDL++T+ +++A I V G Sbjct: 5 TYQDLLDAGVHFGHLTRKWNPKMAQYIFMERNGIHIIDLNKTLVKVEEAAAAIKQIVKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++LFV+TK QA D V E AK V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 65 RKVLFVSTKKQAKDIVAEKAKSVNMPFVTERWLGGMLTNFTTVRKSIKKMTNIDKMTKDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE+L I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L IP Sbjct: 125 TFDVLSKKEKLMIQRERIKLENLLGGIADLNRLPAALFIIDVKKEHIAVSEAMKLNIPTF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P +D+ IP NDD+++SI+L ++ A +G+ Sbjct: 185 AMVDTNSDPSNIDFPIPANDDATKSISLITGIIIKAIEEGL 225 >gi|270284841|ref|ZP_06194235.1| 30S ribosomal protein S2 [Chlamydia muridarum Nigg] gi|270288870|ref|ZP_06195172.1| 30S ribosomal protein S2 [Chlamydia muridarum Weiss] gi|301336221|ref|ZP_07224423.1| 30S ribosomal protein S2 [Chlamydia muridarum MopnTet14] Length = 280 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 101/259 (38%), Positives = 156/259 (60%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I TV Sbjct: 5 ELTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLAQLKKAVSCIQKTVE 64 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L ++E L Sbjct: 65 QGKSILFVGTKKQAKQIIKEAAIECGEFFASERWLGGMLTNMATIRNSVKTLNNIEIDLA 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA +L IP+ Sbjct: 125 SSNSVLTKKETALLAKRHRKLLNNLEGVRHMNSLPGLLVVIDPGYERIAVAEAGKLGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 185 MALVDTNCDPTPINHVIPCNDDSIKSIRLIVNALKDAIIDTKKRSGFEILSPVRPIERPA 244 Query: 245 VHSKEGMQLEEDSQSSESS 263 EG+ L ++Q+ +S Sbjct: 245 EEIVEGLPLPNEAQNDANS 263 >gi|325286743|ref|YP_004262533.1| 30S ribosomal protein S2 [Cellulophaga lytica DSM 7489] gi|324322197|gb|ADY29662.1| ribosomal protein S2 [Cellulophaga lytica DSM 7489] Length = 340 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/230 (42%), Positives = 150/230 (65%), Gaps = 5/230 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + A Sbjct: 4 KIEVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEANEALKKIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +ILFVATK QA D V + A ++ + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 64 SGRKILFVATKKQAKDIVADKAGKANMPYITERWPGGMLTNFVTIRKAVKKMASIDRM-- 121 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ F +KKERL ++R R KL++ L I DM LP +F+VDT RE +A++EA +L Sbjct: 122 KKDGTFLTLSKKERLQVDRLRAKLEKNLGSISDMTRLPGALFIVDTMREHIAVKEALKLN 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPI A+VDTNS+P +DY+IP NDD+S+SI V+ A I+G+A + S Sbjct: 182 IPIFAMVDTNSDPRPIDYIIPSNDDASKSIEAVLSHVSEAIIEGLADRKS 231 >gi|145219273|ref|YP_001129982.1| 30S ribosomal protein S2 [Prosthecochloris vibrioformis DSM 265] gi|189045004|sp|A4SDC1|RS2_PROVI RecName: Full=30S ribosomal protein S2 gi|145205437|gb|ABP36480.1| SSU ribosomal protein S2P [Chlorobium phaeovibrioides DSM 265] Length = 257 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/227 (45%), Positives = 145/227 (63%), Gaps = 9/227 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F + +L +GV FGH W+PKM+ YIF E+N HIIDL +T+ + AL + D +A+ Sbjct: 4 FQLEDMLRAGVHFGHLARRWSPKMKPYIFMEKNGVHIIDLQKTLVLADNALNAL-DAIAQ 62 Query: 66 GGR-ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GR I+FV TK QA + + A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 63 TGREIMFVGTKKQAKNIIAAEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIDRM-- 120 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G TKKERL + R+R+KL R L GI M +P +F+VD +E +AI+EAR L Sbjct: 121 -ETDGTYDMITKKERLMLGREREKLMRILGGIATMTRIPAALFIVDIKKEHIAIKEARSL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI A+VDTN +PDLVDYVIP NDD+ RSI L VA ++ A Sbjct: 180 GIPIFAMVDTNCDPDLVDYVIPANDDAIRSIQLMVKAVADTIVNARA 226 >gi|237668205|ref|ZP_04528189.1| ribosomal protein S2 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237656553|gb|EEP54109.1| ribosomal protein S2 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 233 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 147/224 (65%), Gaps = 6/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKAEEAYNFIKEVATE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E A RS + VN++WLGGM+TN+ T+ I+KL D+E + + Sbjct: 64 GKDILFVGTKKQAQEAIQEEAIRSNMHFVNNRWLGGMLTNFTTIKSRIRKLEDIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRLR 181 E+ F KKE + ++ + +KL++ L GIR++ MF+VD +EK AI EA+ L Sbjct: 122 EDGTFEVLPKKEVIKLKGELEKLQKNLGGIRNLDASNVGAMFIVDPRKEKNAILEAKILG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A I+G Sbjct: 182 IPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIIEG 225 >gi|237805031|ref|YP_002889185.1| 30S ribosomal protein S2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231273331|emb|CAX10246.1| SSU ribosomal protein S2 [Chlamydia trachomatis B/TZ1A828/OT] Length = 282 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESGV FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGVHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGIGILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|149370957|ref|ZP_01890552.1| 30S ribosomal protein S2 [unidentified eubacterium SCB49] gi|149355743|gb|EDM44301.1| 30S ribosomal protein S2 [unidentified eubacterium SCB49] Length = 267 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/227 (43%), Positives = 145/227 (63%), Gaps = 5/227 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++LL++GV FGH WNP M YI+ ERN HII+L +TV L +A + + Sbjct: 1 MAKLEVKELLDAGVHFGHLTRKWNPNMAPYIYMERNGIHIINLYKTVAKLDEANEALKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V E A + + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGRKILFVATKKQAKDIVAEKAGNANMPYITERWPGGMLTNFVTIRKAVKKMTTIDRM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K + F +KKERL ++R R KL++ L I DM LP +FVVDT RE +A+ EA Sbjct: 121 --KADGTFLTLSKKERLQVDRLRAKLEKNLGSISDMSRLPGALFVVDTTREHIAVAEALI 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 L+IPI A+VDTNS+P ++DY IP NDD+S+SI V A I+G+ Sbjct: 179 LKIPIFAMVDTNSDPRVIDYAIPSNDDASKSIDKIMTSVTDAVIEGL 225 >gi|228472825|ref|ZP_04057583.1| ribosomal protein S2 [Capnocytophaga gingivalis ATCC 33624] gi|228275876|gb|EEK14642.1| ribosomal protein S2 [Capnocytophaga gingivalis ATCC 33624] Length = 241 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 145/222 (65%), Gaps = 5/222 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + A G Sbjct: 7 VKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEANEALKKIAASGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++++ K++ Sbjct: 67 KILFVATKKQAKDIVAEKATSVGMPYITERWPGGMLTNFVTIRKAVKKMSSIDKM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L+I R R+KL++ L I DM LP +FVVDT RE +A++EA++L IPI Sbjct: 125 GTYDTLSKKEKLHITRLREKLEKNLGSIADMTRLPAALFVVDTLREHIAVKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P VDYVIP NDD+SRSI V A +G+ Sbjct: 185 FAMVDTNSDPREVDYVIPANDDASRSIEKILSYVVEAIKEGL 226 >gi|82393639|gb|ABB72113.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/268 (38%), Positives = 159/268 (59%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIDQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|170078564|ref|YP_001735202.1| 30S ribosomal protein S2 [Synechococcus sp. PCC 7002] gi|238692819|sp|B1XQQ1|RS2_SYNP2 RecName: Full=30S ribosomal protein S2 gi|169886233|gb|ACA99946.1| 30S ribosomal protein S2 [Synechococcus sp. PCC 7002] Length = 256 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 142/224 (63%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNP+M YI+ RN HIIDL QT ++++A + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPRMAPYIYTSRNGVHIIDLVQTAQLVEQAYTYMKEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA+ + + AKR + +N +WLGGM+TNW+T+ +++L++LE L Sbjct: 61 SENGKHVLFVGTKRQAAGIIAQEAKRCGAFYINQRWLGGMLTNWETIKTRVERLKELEAL 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ DKL++ L GI++M +PD++ ++D RE AIQE ++L Sbjct: 121 EESGNLARRPKKEASMLRRELDKLQKYLGGIKNMRKIPDIVVIIDQRREHNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIV+++DTN +P VD IP NDD+ RSI L +A A G Sbjct: 181 IPIVSLLDTNCDPQTVDLPIPANDDAIRSIKLIVGKLADAIYAG 224 >gi|332711199|ref|ZP_08431132.1| SSU ribosomal protein S2P [Lyngbya majuscula 3L] gi|332350013|gb|EGJ29620.1| SSU ribosomal protein S2P [Lyngbya majuscula 3L] Length = 279 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/227 (42%), Positives = 141/227 (62%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ ++LESGV FGH+ WNPKM+ YI+ RN HIIDL QT +++ A I + Sbjct: 1 MPVVSLAEMLESGVHFGHQTRRWNPKMDPYIYTARNGVHIIDLVQTAQLMEDAYHYIRTS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R Y VN +WLGGM+TNW+T+ +++L+DLE Sbjct: 61 SEQGKRFLFVGTKRQAAGIIAQEASRCGAYYVNQRWLGGMLTNWETIKTRVERLKDLE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI+ M +PD++ ++D RE AI E Sbjct: 119 -RRETSGALDLLPKKEGSMLRRELGKLQKYLGGIKMMRKVPDIVIIIDQKREYNAILECE 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L +PIV+++DTN +PDL D IP NDD+ RSI L +A A +G Sbjct: 178 KLSLPIVSLLDTNCDPDLADIPIPANDDAIRSIKLIIGKLADAIYEG 224 >gi|225013106|ref|ZP_03703520.1| ribosomal protein S2 [Flavobacteria bacterium MS024-2A] gi|225002764|gb|EEG40746.1| ribosomal protein S2 [Flavobacteria bacterium MS024-2A] Length = 287 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 101/234 (43%), Positives = 149/234 (63%), Gaps = 7/234 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P+ + LL +GV FGH WNP M YI+ ERN HII+L +T +++ + + Sbjct: 1 MAKPE--VNDLLNAGVHFGHLTRKWNPNMAPYIYMERNGIHIINLYKTAAKIEETNEALK 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E AK + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 59 KIAASGRKILFVATKKQAKDIVAEKAKAVNMPYITERWPGGMLTNFVTIRKAVKKMGSID 118 Query: 121 ELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + K++ F +KKERL ++R R KL++ L I DM LP +F+VDT RE +A++EA Sbjct: 119 RM--KKDGTFETLSKKERLQVDRLRAKLEKNLGSITDMTRLPGALFIVDTTREHIAVKEA 176 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 ++L+IPI A+VDTNS+P VD+VIP NDD+S+SI LV A +G+ + S Sbjct: 177 QKLKIPIFAMVDTNSDPRDVDFVIPSNDDASKSIDKILGLVTGALAEGLKERQS 230 >gi|113474934|ref|YP_720995.1| 30S ribosomal protein S2 [Trichodesmium erythraeum IMS101] gi|123056931|sp|Q116Q2|RS2_TRIEI RecName: Full=30S ribosomal protein S2 gi|110165982|gb|ABG50522.1| SSU ribosomal protein S2P [Trichodesmium erythraeum IMS101] Length = 272 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 142/226 (62%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ QLLESGV FGH+ WNP+M +YIF ERN HIIDL QT ++ +A I Sbjct: 1 MPVVSLAQLLESGVHFGHQTRRWNPRMSQYIFTERNGVHIIDLVQTAQLMDEAYNYIRTA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R Y +N +WLGGM+TNW T+ +++L+DLE Sbjct: 61 SEQGKKFLFVGTKRQAAGIIAQEATRCGGYYINQRWLGGMLTNWTTIKTRVERLKDLER- 119 Query: 123 LNKENQG---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +E++ KKE + R+ KL++ L GI++M LPD + +VD RE A+QE ++ Sbjct: 120 -REESKALDLLPKKEASVLRREMAKLQKYLGGIKNMRRLPDGVIMVDQRREYNAVQECQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IPIV+++DTN +P VD IP NDD+ RSI L +A A +G Sbjct: 179 LNIPIVSLLDTNCDPTQVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|166154022|ref|YP_001654140.1| 30S ribosomal protein S2 [Chlamydia trachomatis 434/Bu] gi|166154897|ref|YP_001653152.1| 30S ribosomal protein S2 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335222|ref|ZP_07223466.1| 30S ribosomal protein S2 [Chlamydia trachomatis L2tet1] gi|82393633|gb|ABB72109.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393636|gb|ABB72111.1| ribosomal protein S2 [Chlamydia trachomatis] gi|165930010|emb|CAP03493.1| SSU ribosomal protein S2 [Chlamydia trachomatis 434/Bu] gi|165930885|emb|CAP06447.1| SSU ribosomal protein S2 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 282 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 104/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIDQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLIVNTLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|78171804|gb|ABB28900.1| SSU ribosomal protein S2P [Chlorobium chlorochromatii CaD3] Length = 243 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 101/216 (46%), Positives = 135/216 (62%), Gaps = 1/216 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L +GV FGH W PKM+ YIF E+N HIIDL +T + AL+ + G I+ Sbjct: 1 MLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTAELANTALKALEAIAQTGREIM 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 FV TK QA + E A RS V+ +WLGGM+TN++T+ QSI+++ ++ + Sbjct: 61 FVGTKKQAKVIIAEQATRSNMPYVSERWLGGMLTNFQTIRQSIRRMNSIDRMATDGTYDM 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKERL + R+R+KL R L GI M LP +FVVD +E LAI+EAR L IP+ A+VD Sbjct: 121 ITKKERLMLGREREKLMRILGGIATMNRLPAALFVVDIKKEHLAIKEARTLGIPVFAMVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 TN +P+LVDYVIP NDD+ RSI L VA I+ Sbjct: 181 TNCDPELVDYVIPANDDAIRSIQLMVKAVADTIINA 216 >gi|11465715|ref|NP_053859.1| ribosomal protein S2 [Porphyra purpurea] gi|1710703|sp|P51249|RR2_PORPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|1276715|gb|AAC08135.1| 30S ribosomal protein S2 [Porphyra purpurea] Length = 241 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 143/223 (64%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +LLE+GV FGH+ WNPKM YI+ ERN HIIDL QT +L +A + + + G Sbjct: 5 TLAELLEAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTSQLLTEACEFVKQASSDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++LF+ TK QA+ + + A+R Y VN +WLGGM+TNW T+ + +LR LEE ++ Sbjct: 65 RKVLFLGTKRQAAGIIAQEAQRCDSYYVNQRWLGGMLTNWVTIKSRVTRLRQLEE---QD 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ DKL++ L+GI++M LPD++ VVD RE AIQE +L I Sbjct: 122 SSGLIDQLPKKEAAVLRRELDKLRKHLNGIKNMTRLPDIVVVVDQKRETTAIQECLKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +P++++ IP NDD+ RSI L +A A +G Sbjct: 182 PTICILDTNCSPEIINIPIPANDDAIRSIKLIIGKIADAIYEG 224 >gi|163753795|ref|ZP_02160918.1| 30S ribosomal protein S2 [Kordia algicida OT-1] gi|161326009|gb|EDP97335.1| 30S ribosomal protein S2 [Kordia algicida OT-1] Length = 261 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 147/225 (65%), Gaps = 5/225 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH W+P M YI+ ERN HII+L +T +Q+A + + A G Sbjct: 7 VKDLLEAGVHFGHLTRKWDPNMAPYIYMERNGIHIINLYKTAAKIQEANEALKKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA D V E A ++ + +W GGM+TN+ T+ ++++K+ ++ + K++ Sbjct: 67 KILFVATKKQAKDIVAEKAGKANMPYITERWPGGMLTNFVTIRKAVKKMASIDRM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +KKERL ++R R KL++ L I DM LP +FVVD RE +AI+EA++L IPI Sbjct: 125 GTFMTLSKKERLQVDRLRAKLEKNLGSISDMTRLPGALFVVDIKREHIAIKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 A+VDTNS+P V+YVIP NDD+S+SI V A I+G++ + Sbjct: 185 FAMVDTNSDPREVEYVIPANDDASKSIENILTHVTDAVIEGLSER 229 >gi|298207400|ref|YP_003715579.1| 30S ribosomal protein S2 [Croceibacter atlanticus HTCC2559] gi|83850036|gb|EAP87904.1| 30S ribosomal protein S2 [Croceibacter atlanticus HTCC2559] Length = 265 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 146/222 (65%), Gaps = 5/222 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LL++GV FGH WNP M YI+ ERN HII+L ++ +Q+A +S A G Sbjct: 7 VKELLDAGVHFGHLTRRWNPNMAPYIYMERNGIHIINLYKSAAKMQEAADALSKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA + V E A+++ + +W GGM+TN+ T+ ++++K+ ++ + K++ Sbjct: 67 KILFVATKKQAKEIVAEEAEKANMPYITERWPGGMLTNFVTIRKAVKKMTSVDRM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +KKE+L +ER R KL++ L I DM LP +FVVD RE +A++EA++L IPI Sbjct: 125 GRFDTLSKKEKLQVERMRAKLEKNLGSIADMTRLPGALFVVDITREHIAVKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P VD+ IP NDD+S+S+ V A +DG+ Sbjct: 185 FAMVDTNSDPREVDFAIPANDDASKSVKKVISYVTDAIVDGL 226 >gi|88194965|ref|YP_499765.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87202523|gb|ABD30333.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 243 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 142/209 (67%), Gaps = 7/209 (3%) Query: 21 RNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASD 80 ++ +WNPKM++YIF ERN +IIDL +TV + +A + GG++LFV TK QA + Sbjct: 7 KHVVWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQE 66 Query: 81 CVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERL 136 V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ E G KKE + Sbjct: 67 SVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM---EEDGLFEVLPKKEVV 123 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L IPIV +VDTN +PD Sbjct: 124 ELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDE 183 Query: 197 VDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +DYVIP NDD+ R++ L +A A ++G Sbjct: 184 IDYVIPANDDAIRAVKLLTAKMADAILEG 212 >gi|162072725|gb|ABX82360.1| 30S ribosomal protein S2 [Chlamydia trachomatis A2497] Length = 284 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 158/271 (58%), Gaps = 1/271 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKEIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 A + E + L E+S G V Sbjct: 241 AERPAEEAIEELPLPTGEAQDEASSKGGGRV 271 >gi|76443852|gb|ABA42629.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 282 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+GIR M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGIRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGIGILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|78186291|ref|YP_374334.1| 30S ribosomal protein S2 [Chlorobium luteolum DSM 273] gi|123757262|sp|Q3B5U0|RS2_PELLD RecName: Full=30S ribosomal protein S2 gi|78166193|gb|ABB23291.1| SSU ribosomal protein S2P [Chlorobium luteolum DSM 273] Length = 253 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 104/230 (45%), Positives = 143/230 (62%), Gaps = 9/230 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + ++L +GV FGH W PKM+ YIF E+N HIIDL +T+ + AL + D Sbjct: 1 MSHFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTLVLADDALNAL-DA 59 Query: 63 VARGGR-ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 +A+ GR I+FV TK QA + A R+ V +WLGGM+TN+ T+ QSI+++ +E Sbjct: 60 IAQTGREIMFVGTKKQAKQIIAAEATRAGMPFVCERWLGGMLTNFSTIRQSIRRMNSIER 119 Query: 122 LLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + E G TKKERL + R+R+KL R L GI M LP +F+VD +E +AI+EA Sbjct: 120 M---ETDGTFDMITKKERLMLAREREKLMRILGGIATMTRLPAALFIVDIKKEHIAIKEA 176 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 R L IPI A+VDTN +P+ VDYVIP NDD+ RSI L VA ++ A Sbjct: 177 RSLGIPIFAMVDTNCDPEQVDYVIPANDDAIRSIQLMVKAVADTVVNARA 226 >gi|254414470|ref|ZP_05028236.1| ribosomal protein S2 [Microcoleus chthonoplastes PCC 7420] gi|196178700|gb|EDX73698.1| ribosomal protein S2 [Microcoleus chthonoplastes PCC 7420] Length = 309 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 93/227 (40%), Positives = 144/227 (63%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++E+GV FGH+ WNP+M++YI+ RN HIIDL QT ++++A + Sbjct: 1 MPVVSLAQMMEAGVHFGHQTRRWNPRMDQYIYTARNGVHIIDLVQTAQLMEEAYSYMRTA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R Y VN +WLGGM+TNW+T+ +++L++LE Sbjct: 61 TEQGKRCLFVGTKRQAAGIIAQEASRCGAYYVNQRWLGGMLTNWETIKGRVERLKELE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI+ M +PD++ ++D RE AI+E Sbjct: 119 -RREESGALDLLPKKEAAVLRRELGKLQKYLGGIKMMRRIPDIVVIIDQRREYNAIKECE 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IP+V+++DTN +PD+VD IP NDD+ RSI L +A A +G Sbjct: 178 KLSIPVVSMLDTNCDPDVVDIPIPANDDAIRSIKLIIGKLADAIYEG 224 >gi|15605413|ref|NP_220199.1| 30S ribosomal protein S2 [Chlamydia trachomatis D/UW-3/CX] gi|255311507|ref|ZP_05354077.1| 30S ribosomal protein S2 [Chlamydia trachomatis 6276] gi|255317809|ref|ZP_05359055.1| 30S ribosomal protein S2 [Chlamydia trachomatis 6276s] gi|6831542|sp|O84687|RS2_CHLTR RecName: Full=30S ribosomal protein S2 gi|3329132|gb|AAC68275.1| S2 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|82393609|gb|ABB72093.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393612|gb|ABB72095.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393618|gb|ABB72099.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393621|gb|ABB72101.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393624|gb|ABB72103.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393627|gb|ABB72105.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393642|gb|ABB72115.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393645|gb|ABB72117.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393654|gb|ABB72123.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393660|gb|ABB72127.1| ribosomal protein S2 [Chlamydia trachomatis] gi|296436222|gb|ADH18396.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/9768] gi|296437150|gb|ADH19320.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/11222] gi|296438082|gb|ADH20243.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/11074] gi|297140583|gb|ADH97341.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/9301] gi|297748811|gb|ADI51357.1| SSU ribosomal protein S2P [Chlamydia trachomatis D-EC] gi|297749691|gb|ADI52369.1| SSU ribosomal protein S2P [Chlamydia trachomatis D-LC] Length = 282 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 100/262 (38%), Positives = 155/262 (59%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I T+ + Sbjct: 7 LTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACIQTTIGQ 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 67 EKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLEA 126 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA +L IP++ Sbjct: 127 SNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGKLGIPVM 186 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + A Sbjct: 187 ALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRPAERPAE 246 Query: 246 HSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 247 EAVEELPLPTGEAQDEASSKEG 268 >gi|86140802|ref|ZP_01059361.1| 30S ribosomal protein S2 [Leeuwenhoekiella blandensis MED217] gi|85832744|gb|EAQ51193.1| 30S ribosomal protein S2 [Leeuwenhoekiella blandensis MED217] Length = 261 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 149/227 (65%), Gaps = 5/227 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LL++GV FGH W+P M YI+ ERN HII+L +T L +A + +S A G Sbjct: 7 VKDLLDAGVHFGHLTRRWDPNMAPYIYMERNGIHIINLYKTAAKLNEASEALSKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA + V E A R+ + +W GGM+TN+ T+ ++++K++ ++ + K++ Sbjct: 67 KILFVATKKQAKEIVAEQATRAKMPYITERWPGGMLTNFVTIRKAVKKMQTVDRM--KQD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +KKE+L + R R+KL++ L I DM LP +FVVD RE +AI+EA++L IPI Sbjct: 125 GRFDSLSKKEQLQMNRMREKLEKNLGSIEDMTRLPGALFVVDIKREHIAIKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 A+VDTNS+P VDY IP NDD+S+SI VA A ++G++ + + Sbjct: 185 FAMVDTNSDPRQVDYAIPSNDDASKSIEKIISNVADAIVEGLSERKA 231 >gi|91214955|ref|ZP_01251927.1| 30S ribosomal protein S2 [Psychroflexus torquis ATCC 700755] gi|91186560|gb|EAS72931.1| 30S ribosomal protein S2 [Psychroflexus torquis ATCC 700755] Length = 313 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 101/245 (41%), Positives = 157/245 (64%), Gaps = 11/245 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P ++ LL++GV FGH WNP M Y++ ERN HII+L +TV +++A + +S Sbjct: 1 MANP-IVVKDLLDAGVHFGHLTRRWNPNMAPYVYMERNGIHIINLYKTVAKMEEAGEALS 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA + V + ++R+ + +W GGM+TN+ T+ +S++K+ ++ Sbjct: 60 RIAASGRKILFVATKKQAKEIVAQESQRAQMPYITERWPGGMLTNFVTIRKSVKKMATVD 119 Query: 121 ELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + K++ F +KKERL ++R R KL++ L I +M LP +FVVDT RE +A++EA Sbjct: 120 RM--KKDGTFNSLSKKERLQVDRMRAKLEKNLGSISEMSRLPAAIFVVDTLREHIAVKEA 177 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 ++L IP+ A+VDTNSNP VDY IP NDD+S+SI + + ++G+ + D Sbjct: 178 QKLNIPVFALVDTNSNPRDVDYAIPANDDASKSIHKVMSYMTDSILEGLNERK-----DG 232 Query: 238 KSAGE 242 K +GE Sbjct: 233 KDSGE 237 >gi|76443861|gb|ABA42635.1| S2 ribosomal protein [Chlamydia trachomatis] gi|82393666|gb|ABB72131.1| ribosomal protein S2 [Chlamydia trachomatis] gi|289525724|emb|CBJ15205.1| SSU ribosomal protein S2 [Chlamydia trachomatis Sweden2] gi|296435294|gb|ADH17472.1| 30S ribosomal protein S2 [Chlamydia trachomatis E/150] gi|296439012|gb|ADH21165.1| 30S ribosomal protein S2 [Chlamydia trachomatis E/11023] Length = 282 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLTKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|187735180|ref|YP_001877292.1| ribosomal protein S2 [Akkermansia muciniphila ATCC BAA-835] gi|187425232|gb|ACD04511.1| ribosomal protein S2 [Akkermansia muciniphila ATCC BAA-835] Length = 231 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 142/219 (64%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I Q++E+GV GH+ W+P M++Y+ ++ HII+L +T L KA ++D R Sbjct: 6 INQMVEAGVHLGHQTRKWHPSMKKYLLKDKAGIHIINLEETEKCLDKACSFLADLARRNK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV K QA + V EAA+ + QY VN +WLGGM+TN T+ +SI++L LE + + E Sbjct: 66 KILFVGCKRQAQEAVREAAEATGQYYVNHRWLGGMLTNMSTIRKSIERLVYLEGIEKSPE 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE ++R+R KL+R L GIR+MGG PD M + + E +AI+EA RL IP+ Sbjct: 126 FKSMSKKELAALDRERQKLERNLQGIRNMGGAPDAMVAIGADHEDIAIREAHRLNIPVCV 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN++P +D+ IPGNDD+ RSI L D + A +G Sbjct: 186 LVDTNADPKEIDFPIPGNDDAVRSIRLILDCIVKAINEG 224 >gi|16330739|ref|NP_441467.1| 30S ribosomal protein S2 [Synechocystis sp. PCC 6803] gi|2500390|sp|P74071|RS2_SYNY3 RecName: Full=30S ribosomal protein S2 gi|1653232|dbj|BAA18147.1| 30S ribosomal protein S2 [Synechocystis sp. PCC 6803] Length = 269 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 97/227 (42%), Positives = 145/227 (63%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LLESGV FGH+ WNP+M++YI+ RN HIIDL QT +++ A + + + Sbjct: 1 MPVVSLADLLESGVHFGHQTRRWNPRMDQYIYTARNGVHIIDLVQTAQLMEDAYEYVRSS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A+R + VN +WLGGM+TNW+T+ + + +L++LE L Sbjct: 61 TINGKKFLFVGTKRQAAGIISQEAQRCGAHYVNQRWLGGMLTNWETIRKRVDRLKELEAL 120 Query: 123 LNKENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE + R+ KL++ L GI++M LPD++ +VD RE AI E + Sbjct: 121 ---EASGGIDRRGKKEGSMLRRELGKLQKYLGGIKNMRKLPDVVVIVDQRREHNAIHECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPI+A++DTN +PD+VD IP NDD+ RSI L +A A +G Sbjct: 178 KLGIPIIAMLDTNCDPDVVDVPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|82393669|gb|ABB72133.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|119025017|gb|ABA42631.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 284 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 1/271 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 A + E + L E+S G V Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKGGGRV 271 >gi|228470250|ref|ZP_04055154.1| ribosomal protein S2 [Porphyromonas uenonis 60-3] gi|228307993|gb|EEK16868.1| ribosomal protein S2 [Porphyromonas uenonis 60-3] Length = 297 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 141/217 (64%), Gaps = 1/217 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+G FGH WNP M YIF ERN HIIDL +TV + + ++I + + G +I Sbjct: 8 QLLEAGAHFGHMPRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDECAEIIKNMASSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQ 128 LFV TK QA + + E AK V +W GGM+TN+ T+ ++++K+ ++++ + Sbjct: 68 LFVGTKRQAKEPIAELAKSVGMPYVTERWPGGMLTNFPTIRKAVKKMGQIDKMREDGTYN 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+ERL ++R++ KL + L IRDM LP+ +FVVD RE +AI+EA+RL IP+ A+V Sbjct: 128 NLSKRERLQLDRQQAKLDKNLGSIRDMNRLPNALFVVDVMREHIAIREAQRLGIPVFAIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 DTN+NP +DYVIP NDDS+++I L + A +G Sbjct: 188 DTNANPRDIDYVIPANDDSTQAIELIVSAMCQAINEG 224 >gi|299830354|ref|YP_003734569.1| ribosomal protein S2 [Kryptoperidinium foliaceum] gi|297385056|gb|ADI40354.1| ribosomal protein S2 [Kryptoperidinium foliaceum] Length = 229 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 98/228 (42%), Positives = 144/228 (63%), Gaps = 9/228 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ + WNPKM YI+ E NN HI+DL QT +L+ A + Sbjct: 1 MSDISLSQLLEAGVHFGHKAYRWNPKMFPYIYSEVNNIHILDLIQTATLLKAANNYLESA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + LF+ TK QA+ + + AKR Y VN +WLGGM+TNW T+ I++L+DLE+ Sbjct: 61 ASEEKTFLFIGTKRQATTLIAQEAKRCNSYYVNHRWLGGMLTNWSTIKDRIKRLKDLEK- 119 Query: 123 LNKENQG----FTKKERLNIERKR-DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +E G TKKE + I RK KL++ LDGI+ + +PD+ ++D RE A+ E Sbjct: 120 --QEADGTFELLTKKE-VAIRRKELSKLRKHLDGIKSLKDIPDVAIIIDQKREMTAVLEC 176 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 R+L IPI++++DTN +P+LVD IPGNDD+ RSI L + + + + G Sbjct: 177 RKLGIPIISILDTNCDPELVDIPIPGNDDAVRSIKLILNSLTDSILRG 224 >gi|320103136|ref|YP_004178727.1| 30S ribosomal protein S2P [Isosphaera pallida ATCC 43644] gi|319750418|gb|ADV62178.1| SSU ribosomal protein S2P [Isosphaera pallida ATCC 43644] Length = 307 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 105/257 (40%), Positives = 154/257 (59%), Gaps = 3/257 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ L+E+GV FG R WNPKM+ YI+ +RN HIIDL +TV L +A + A+ Sbjct: 4 LAVKDLVEAGVHFGSRARRWNPKMKPYIYTKRNLIHIIDLKETVRGLLRASKYFHRIAAQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA+D ++E R V +WLGG +TN++T+ +++L +LE +L+ Sbjct: 64 NGLILFVGTKRQAADILVEECTRCGMPYVTERWLGGTLTNFRTIRSRLERLEELEAILDG 123 Query: 126 ENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E ++KK + R+R K++R L GIR M LP+ +FVVD NRE A+ EAR+L I + Sbjct: 124 EQAATYSKKMISTLTRERRKIERNLSGIRHMTRLPEALFVVDPNREHNAVVEARKLGIKV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA++DT+ +PDL+D IPGNDDS RSI L + + ++G R + D S GE Sbjct: 184 VALLDTDCDPDLIDLPIPGNDDSMRSIELIVRRLTDSILEG--RLSAPAEPDPASRGERA 241 Query: 245 VHSKEGMQLEEDSQSSE 261 + G + E + E Sbjct: 242 PRGERGPRGERRAPRGE 258 >gi|218283545|ref|ZP_03489535.1| hypothetical protein EUBIFOR_02125 [Eubacterium biforme DSM 3989] gi|218215813|gb|EEC89351.1| hypothetical protein EUBIFOR_02125 [Eubacterium biforme DSM 3989] Length = 312 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 92/223 (41%), Positives = 149/223 (66%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++++LE+GV FGH+ WNPKM+ +I+ RN +I+DL+QT ++ A + RG Sbjct: 16 SMKKMLENGVHFGHQTRRWNPKMKPFIYTSRNGVYIVDLNQTQAQIEAAYNELKAISERG 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA++ V E A RS + VN +WLGG++TN++T+ + I++L ++EE+ E Sbjct: 76 GKVLFVGTKKQAAEVVEEQALRSGSFYVNKRWLGGLLTNFRTIQKRIKRLVEIEEM---E 132 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G +TKKE+ N+ +++ KL+ +L GI++M LPD + V+D E AI EA++L I Sbjct: 133 ASGKIEVYTKKEQANLRKEKAKLEGSLGGIKEMKKLPDALVVIDPKEEHNAIAEAKKLGI 192 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ A++DTN +P+ D+ I NDD+ RSI L ++A A +D Sbjct: 193 PVFAMLDTNCDPEDADFAIASNDDAVRSIKLVTTILADAIVDA 235 >gi|76789420|ref|YP_328506.1| 30S ribosomal protein S2 [Chlamydia trachomatis A/HAR-13] gi|237803110|ref|YP_002888304.1| 30S ribosomal protein S2 [Chlamydia trachomatis B/Jali20/OT] gi|123606673|sp|Q3KL14|RS2_CHLTA RecName: Full=30S ribosomal protein S2 gi|76167950|gb|AAX50958.1| SSU ribosomal protein S2P [Chlamydia trachomatis A/HAR-13] gi|76443846|gb|ABA42625.1| S2 ribosomal protein [Chlamydia trachomatis] gi|231274344|emb|CAX11139.1| SSU ribosomal protein S2 [Chlamydia trachomatis B/Jali20/OT] Length = 282 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 102/268 (38%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGIGILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|119487918|ref|ZP_01621415.1| 30S ribosomal protein S2 [Lyngbya sp. PCC 8106] gi|119455494|gb|EAW36632.1| 30S ribosomal protein S2 [Lyngbya sp. PCC 8106] Length = 277 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 99/244 (40%), Positives = 149/244 (61%), Gaps = 10/244 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ ++LESGV FGH+ WNPKM YI+ ERN HIIDL QT ++++A + I + Sbjct: 1 MPVISLAEMLESGVHFGHQTRRWNPKMAPYIYTERNGVHIIDLLQTAQLMEEAYEYIRSS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A+R Y VN +WLGGM+TNW T+ + +L++LE Sbjct: 61 SEQGKKFLFVGTKRQAAGIIAQEAQRCGGYYVNQRWLGGMLTNWTTIKTRVDRLKELE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++ G KKE + R+ +KL++ L GI+ M +PD + ++D RE A+ E R Sbjct: 119 -YRQESGQLDYLPKKEASMLRRELEKLQKYLGGIKLMRRIPDAVVMIDQRREHNAVMECR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IPI+A++DTN +PDL D IP NDD+ R+I L A A +G +H + D+ Sbjct: 178 KLGIPIIAMLDTNCDPDLADIHIPANDDAIRAIKLIVGKFADAIYEG---RHGELETDSD 234 Query: 239 SAGE 242 A E Sbjct: 235 FAEE 238 >gi|82393615|gb|ABB72097.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393657|gb|ABB72125.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 101/268 (37%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L +P++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGVPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|227536279|ref|ZP_03966328.1| ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33300] gi|300772318|ref|ZP_07082188.1| 30S ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33861] gi|227243886|gb|EEI93901.1| ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33300] gi|300760621|gb|EFK57447.1| 30S ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33861] Length = 270 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T + LL++GV FGH W+PKM +YIF ERN HIIDL++T+ L++A I V G Sbjct: 5 TYQDLLDAGVHFGHLTRKWDPKMAKYIFMERNGIHIIDLNKTLTKLEEAASAIKQIVKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++LFVATK QA + + + AK V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 65 RKVLFVATKKQAKEIIAQQAKEVNMPFVTERWLGGMLTNFATVRKSIKKMSNIDKMQKDG 124 Query: 127 NQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE+L I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L IP Sbjct: 125 TYDVLSKKEKLMIQRERIKLESLLGGIADLNRLPAALFIIDVKKEHIAVSEAIKLNIPTF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P +D+ IP NDD+++SI+L +++ A +G+ Sbjct: 185 AMVDTNSDPTNIDFPIPANDDATKSISLIAGIISKAIQEGL 225 >gi|82393648|gb|ABB72119.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 285 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 102/268 (38%), Positives = 156/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKKG 268 >gi|330721263|gb|EGG99356.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC2047] Length = 225 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 96/192 (50%), Positives = 131/192 (68%), Gaps = 1/192 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +IF RN HII+L TVP L AL V+ + +ILFV TK AS + E A R Sbjct: 1 MAPFIFGARNKIHIINLEHTVPALNDALAVVRKLASSKNKILFVGTKRAASKIIKEQAVR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKR 147 + VN +WLGGM+TN+KT+ QSI++LRDLE + + TKKE L R+ +KL+R Sbjct: 61 ATMPYVNHRWLGGMLTNYKTIRQSIKRLRDLEAQQADGTFDQITKKEALMRTREMEKLER 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 ++ GI++MGGLPD +FV+D + E++A+ EA +L IP++ VVDTNSNPD +DYVIPGNDD+ Sbjct: 121 SIGGIKEMGGLPDALFVIDVDHERIAVNEANKLGIPVIGVVDTNSNPDGIDYVIPGNDDA 180 Query: 208 SRSIALFCDLVA 219 RSI ++ VA Sbjct: 181 IRSIQIYVQAVA 192 >gi|82393630|gb|ABB72107.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 155/263 (58%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I T+ Sbjct: 6 KLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCIQKTIE 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 66 QERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLE 125 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA +L IP+ Sbjct: 126 ASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGKLGIPV 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + A Sbjct: 186 MALVDTNCDPTPINHVIPCNDDSIKSIRLIVNTLKDAVIDAKKRLGVEILSPVRPAERPA 245 Query: 245 VHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 246 EEAVEELPLPTGEAQDEASSKEG 268 >gi|162072727|gb|ABX82361.1| 30S ribosomal protein S2 [Chlamydia trachomatis] Length = 284 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 157/271 (57%), Gaps = 1/271 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 A + E + L E+S G V Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKGGGGV 271 >gi|223985630|ref|ZP_03635680.1| hypothetical protein HOLDEFILI_02986 [Holdemania filiformis DSM 12042] gi|223962397|gb|EEF66859.1| hypothetical protein HOLDEFILI_02986 [Holdemania filiformis DSM 12042] Length = 308 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 146/221 (66%), Gaps = 7/221 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LESGV FGH+ W+PKM+ YI+ +N +IIDL++T L +A + + +GG Sbjct: 1 MRKMLESGVHFGHQTRRWDPKMKPYIYTAKNGVYIIDLAKTQQKLDEAYEAMKAIAEKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA V++ A RS + VN +WLGG++TN++T+ + I++L ++EE+ E Sbjct: 61 KVLFVGTKKQAQSVVLDEALRSGSFYVNQRWLGGILTNYRTIQKRIKRLLEIEEM---EA 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G + KKE I ++ +L+ L GI++M LPD +FVVD E A+ EA++L IP Sbjct: 118 SGSINVYPKKEVAQIRKEAARLENFLGGIKEMKKLPDAIFVVDPKEEHNAVAEAKKLNIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + A+VDTN NP+ VD+ IP NDD+ RS+ L ++A A ++ Sbjct: 178 VFAMVDTNCNPEEVDFPIPSNDDAIRSVKLIIGVLADAIVE 218 >gi|160915173|ref|ZP_02077386.1| hypothetical protein EUBDOL_01181 [Eubacterium dolichum DSM 3991] gi|158432972|gb|EDP11261.1| hypothetical protein EUBDOL_01181 [Eubacterium dolichum DSM 3991] Length = 310 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+ I+ RN +II+L +T+ ++ A + + G Sbjct: 5 TMRKLLESGVHFGHQTRRWNPKMKPNIYASRNGVYIINLEKTLEQIETAYAAMKEIAENG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA V+E A RS + VN +WLGG++TN++T+ + +++L ++EE+ E Sbjct: 65 GKVLFVGTKKQAQATVVEEALRSGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G + KKE +++++ +L+ L GI++M LP+ +FV+D E A+ EA++L I Sbjct: 122 ANGTLDLYPKKEIAQVKKQKARLENFLGGIKEMKKLPNAIFVIDPKEEHNAVAEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ A+VDTN +P++VDY I NDD+ RS+ L L+A A ++ Sbjct: 182 PVFAMVDTNCDPEMVDYPIASNDDAVRSVKLITTLMADAIVEA 224 >gi|124005877|ref|ZP_01690715.1| ribosomal protein S2 [Microscilla marina ATCC 23134] gi|123988560|gb|EAY28201.1| ribosomal protein S2 [Microscilla marina ATCC 23134] Length = 272 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 101/262 (38%), Positives = 161/262 (61%), Gaps = 8/262 (3%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + LL++GV FGH W+P++ Y+F E+N HIIDL++T+ L A ++ V G + Sbjct: 7 KDLLDAGVHFGHLTRKWDPRIAPYVFMEKNGIHIIDLNKTLVCLDDACNALAKIVRAGRK 66 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN- 127 ++FVATK QA + V E AKR V +WLGGM+TN+ TV +S++K+ +++++ +E Sbjct: 67 VMFVATKRQAQEIVAEEAKRLRMPYVTERWLGGMLTNFATVRKSLKKMSSMDKMMKEEAF 126 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + K+ERL I R+R+KL+R L GI D+ LP +FVVD RE +AI EA +L IP+ A+ Sbjct: 127 KNMAKRERLMITREREKLERLLGGIADLTRLPAALFVVDVKREHIAIAEAHKLGIPVFAM 186 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 VDTNSNP V + +P NDD+ +SI + V A +G++ + K E + Sbjct: 187 VDTNSNPGAVQFPVPANDDAFKSIQVITSTVGKAIEEGLSERK-------KDKEEQKLAK 239 Query: 248 KEGMQLEEDSQSSESSVLDGQE 269 +E + + D+++ E+ D ++ Sbjct: 240 EEQAKRQVDAKAEEAKAEDTEK 261 >gi|313901229|ref|ZP_07834717.1| ribosomal protein S2 [Clostridium sp. HGF2] gi|312954187|gb|EFR35867.1| ribosomal protein S2 [Clostridium sp. HGF2] Length = 317 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 146/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R+LLESGV FGH+ WNPKM+ I+ RN +II+L +T+ L A + D +G Sbjct: 5 TMRKLLESGVHFGHQTRRWNPKMKPNIYASRNGVYIINLEKTLEQLDTAYAAMKDIAEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA V+E A RS + VN +WLGG++TN++T+ + +++L ++EE+ E Sbjct: 65 GKVLFVGTKKQAQAVVVEEALRSGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G + KKE +++++ +L+ L GI++M LP+ +FV+D E A+ EA++L I Sbjct: 122 ANGTLDLYPKKEIAQVKKQKARLENFLGGIKEMKKLPNAIFVIDPKEEHNAVAEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ A+VDTN +P+ VDY I NDD+ RS+ L L+A A ++ Sbjct: 182 PVFAMVDTNCDPETVDYPIASNDDAIRSVKLITTLMADAIVEA 224 >gi|255536095|ref|YP_003096466.1| SSU ribosomal protein S2p (SAe) [Flavobacteriaceae bacterium 3519-10] gi|255342291|gb|ACU08404.1| SSU ribosomal protein S2p (SAe) [Flavobacteriaceae bacterium 3519-10] Length = 258 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/232 (40%), Positives = 151/232 (65%), Gaps = 5/232 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LLE+GV FGH WNP M YIF E+N HI+DL +T L +A + Sbjct: 1 MAKANVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIVDLHKTAVKLDEACTALEKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 TSAGKKVLFVATKKQAKEVVAKYAADLNMPYITERWPGGMLTNFVTIRKAVKKMNQIDKM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +KKERL ++R+R L++ L I DM LP +FVVD +E +AI EA++ Sbjct: 121 --KKDGTFETLSKKERLQVDRQRANLEKNLGSISDMVRLPSAIFVVDIMKEHIAITEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 L IPI A+VDTNS+P VDYVIPGNDD+S+SI + +V+++ DG++++ + Sbjct: 179 LGIPIFAIVDTNSDPRKVDYVIPGNDDASKSIDMLLSIVSASIKDGLSQRKA 230 >gi|34540206|ref|NP_904685.1| 30S ribosomal protein S2 [Porphyromonas gingivalis W83] gi|188995452|ref|YP_001929704.1| 30S ribosomal protein S2 [Porphyromonas gingivalis ATCC 33277] gi|61215673|sp|Q7MX41|RS2_PORGI RecName: Full=30S ribosomal protein S2 gi|238689265|sp|B2RL62|RS2_PORG3 RecName: Full=30S ribosomal protein S2 gi|34396518|gb|AAQ65584.1| ribosomal protein S2 [Porphyromonas gingivalis W83] gi|188595132|dbj|BAG34107.1| putative 30S ribosomal protein S2 [Porphyromonas gingivalis ATCC 33277] Length = 281 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 96/225 (42%), Positives = 143/225 (63%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + QLLE+G FGH WNP M YIF ERN+ HIIDL +TV + +A +VI Sbjct: 1 MSRISFDQLLEAGAHFGHLKRKWNPAMAPYIFMERNDIHIIDLHKTVAKVDEAAEVIKGM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA + + E AK V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKNGKKILFVATKKQAKEPIAELAKSVGMPYVVERWPGGMLTNFPTIRKAVKKMTQIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R KL++ L I DM LP +FVVD +E +A++EA RL Sbjct: 121 TADGTFDNLSKREKLQITRQRAKLEKTLGSIADMNRLPSALFVVDVMKEHIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+ A+VDTNS+P L+DYVIP NDD+ ++I L + A +G+ Sbjct: 181 IPVFAMVDTNSDPSLIDYVIPSNDDALKAIELIVGTMCQAINEGL 225 >gi|293400525|ref|ZP_06644670.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305551|gb|EFE46795.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 317 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 147/223 (65%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLESGV FGH+ WNPKM+ I+ RN +II+L +T+ L A + + +G Sbjct: 5 SMRKLLESGVHFGHQTRRWNPKMKPNIYASRNGVYIINLEKTLEQLDTAYAAMREIAEKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA V+E A RS + VN +WLGG++TN++T+ + +++L ++EE+ E Sbjct: 65 GKVLFVGTKKQAQAVVVEEALRSGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G + KKE +++++ +L+ L GI++M LP+ +FV+D E A+ EA++L I Sbjct: 122 ANGTLDLYPKKEIAQVKKQKARLENFLGGIKEMKKLPNALFVIDPKEEHNAVAEAKKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+ A+VDTN +P++VDY I NDD+ RS+ L L+A A ++ Sbjct: 182 PVFAMVDTNCDPEMVDYPIASNDDAIRSVKLITTLMADAIVEA 224 >gi|186685622|ref|YP_001868818.1| 30S ribosomal protein S2 [Nostoc punctiforme PCC 73102] gi|238689426|sp|B2J6U9|RS2_NOSP7 RecName: Full=30S ribosomal protein S2 gi|186468074|gb|ACC83875.1| ribosomal protein S2 [Nostoc punctiforme PCC 73102] Length = 264 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/227 (41%), Positives = 139/227 (61%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAQLMDNAYNYMRSH 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ + +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEASRCGSHYINQRWLGGMLTNWATIKTRVDRLKDLE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI+ M +PD++ +VD RE A+QE + Sbjct: 119 -RREETGALDLLPKKEASMLRREMTKLQKYLGGIKTMRKVPDIVVIVDQRREYNAVQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Sbjct: 178 KLNIPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|169350428|ref|ZP_02867366.1| hypothetical protein CLOSPI_01196 [Clostridium spiroforme DSM 1552] gi|169292748|gb|EDS74881.1| hypothetical protein CLOSPI_01196 [Clostridium spiroforme DSM 1552] Length = 304 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 97/220 (44%), Positives = 145/220 (65%), Gaps = 7/220 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + +A + +++ A+ Sbjct: 21 ISMKKLLEVGVHFGHQTKRWNPKMAPYIFTARNGIYIIDLQKSSKKIDEAYKAMNEIAAK 80 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V E A RS + VNS+WLGG +TN+KT+ + I++L +LE++ Sbjct: 81 GGKVLFVGTKKQAQEAVKEEAIRSESFYVNSRWLGGTLTNFKTIQKRIKRLIELEKM--- 137 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ KL++ L GI++M LP+ +FVVD E A+ EAR L Sbjct: 138 EADGTFDLLPKKEVILLKKEAAKLEKNLGGIKEMRRLPNALFVVDPKAEHNAVAEARILG 197 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP+ +VDTN +PD VDYVIP NDD+ R++ L +A A Sbjct: 198 IPVFGIVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADA 237 >gi|110596888|ref|ZP_01385178.1| ribosomal protein S2 [Chlorobium ferrooxidans DSM 13031] gi|110341575|gb|EAT60035.1| ribosomal protein S2 [Chlorobium ferrooxidans DSM 13031] Length = 251 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 139/221 (62%), Gaps = 7/221 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + ++L +GV FGH W PKM+ YIF E+N HIIDL +TV + +AL+ I Sbjct: 1 MSHFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTVVLADEALKAIEAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKQIIAAEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNSIDRM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G TKKERL + R+++KL R L GI M LP +F+VD +E +AI+EAR Sbjct: 121 ---ETDGTFDMITKKERLMLGREKEKLMRILGGIATMTRLPAALFIVDIKKEHIAIKEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 L IPI+A+VDTN +P+ VD+VIP NDD+ RSI L VA Sbjct: 178 SLGIPIIAMVDTNCDPEQVDFVIPANDDAIRSIQLMVKAVA 218 >gi|126663059|ref|ZP_01734057.1| 30S ribosomal protein S2 [Flavobacteria bacterium BAL38] gi|126624717|gb|EAZ95407.1| 30S ribosomal protein S2 [Flavobacteria bacterium BAL38] Length = 253 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/226 (42%), Positives = 148/226 (65%), Gaps = 5/226 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++LLE+GV FGH W+P M YI+ ERN HII+L +T +++A + + A Sbjct: 4 KIDVKELLEAGVHFGHMTRKWDPNMAPYIYMERNGIHIINLYKTAAKIEEANEALKKIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 64 SGRKVLFVATKKQAKDIVAEKAAACNMPYITERWPGGMLTNFVTIRKAVKKMASIDRM-- 121 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ F +KKERL ++R R KL++ L I DM LP +FVVD E +AI+EA++L Sbjct: 122 KKDGTFMTLSKKERLQVDRLRAKLEKNLGSIADMSRLPAALFVVDVKAEHIAIKEAQKLN 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+ A+VDTNS+P +D+VIP NDD+S+SI LV++A I+G++ Sbjct: 182 IPVFAMVDTNSDPRPIDFVIPANDDASKSIDKVLSLVSAALIEGLS 227 >gi|46445770|ref|YP_007135.1| 30S ribosomal protein S2 [Candidatus Protochlamydia amoebophila UWE25] gi|61215578|sp|Q6MEY9|RS2_PARUW RecName: Full=30S ribosomal protein S2 gi|46399411|emb|CAF22860.1| probable 30S ribosomal protein S2 [Candidatus Protochlamydia amoebophila UWE25] Length = 272 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 149/222 (67%), Gaps = 1/222 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP +I+ LLE+G FGH+ WNPKM+R+IF ERN +IIDL++T+ ++ A+ ++ D Sbjct: 9 LP-ISIKDLLEAGAHFGHQTSRWNPKMKRFIFEERNGLYIIDLAKTLQQIRNAVDIVRDV 67 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+ ILFV TK QA + E +++ ++ V +WLGGM+TN T+ QS++KL +E+ Sbjct: 68 VAKHKSILFVGTKKQAKAVLRELSEQCGEFYVCERWLGGMLTNLSTIRQSVKKLERIEKR 127 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ +G TKKE + + + KL++ L G+R M P L+ VVD ++E LA+ EA +L I Sbjct: 128 ISTGGEGLTKKEISLLTKDQIKLEKNLSGVRSMRKPPGLVIVVDPSKEHLAVAEANKLGI 187 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ +VDTN +PD +++VI NDD+ +SI L + +A A ID Sbjct: 188 PVMGLVDTNCDPDPIEHVIACNDDALKSIKLILETLAKAIID 229 >gi|119025015|gb|ABA42627.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 281 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 96/229 (41%), Positives = 144/229 (62%), Gaps = 1/229 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKR 229 >gi|255349069|ref|ZP_05381076.1| 30S ribosomal protein S2 [Chlamydia trachomatis 70] gi|255503607|ref|ZP_05381997.1| 30S ribosomal protein S2 [Chlamydia trachomatis 70s] gi|76443864|gb|ABA42637.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 282 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 102/268 (38%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELHLPTGEAQDEASSKEG 268 >gi|82393663|gb|ABB72129.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 96/229 (41%), Positives = 144/229 (62%), Gaps = 1/229 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLGQLEKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHHKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKR 229 >gi|218463219|ref|ZP_03503310.1| 30S ribosomal protein S2 [Rhizobium etli Kim 5] Length = 122 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 106/122 (86%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 EL 122 E+ Sbjct: 121 EI 122 >gi|75908282|ref|YP_322578.1| 30S ribosomal protein S2 [Anabaena variabilis ATCC 29413] gi|123731512|sp|Q3MBF3|RS2_ANAVT RecName: Full=30S ribosomal protein S2 gi|75702007|gb|ABA21683.1| SSU ribosomal protein S2P [Anabaena variabilis ATCC 29413] Length = 265 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 95/227 (41%), Positives = 140/227 (61%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ +A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAHLMDEAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ + +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRVDRLKDLE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI+ M +PD++ +VD RE A+QE + Sbjct: 119 -RREESGALDLLPKKEASMLRRELAKLQKYLGGIKTMRKVPDVVVIVDQRREYNAVQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Sbjct: 178 KLSIPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|17232284|ref|NP_488832.1| 30S ribosomal protein S2 [Nostoc sp. PCC 7120] gi|25009211|sp|Q8YMY2|RS2_ANASP RecName: Full=30S ribosomal protein S2 gi|17133929|dbj|BAB76491.1| 30S ribosomal protein S2 [Nostoc sp. PCC 7120] Length = 265 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 95/227 (41%), Positives = 140/227 (61%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ +A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAHLMDEAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ + +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRVDRLKDLE-- 118 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI+ M +PD++ +VD RE A+QE + Sbjct: 119 -RREESGALDLLPKKEASMLRRELAKLQKYLGGIKTMRKVPDVVVIVDQRREYNAVQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Sbjct: 178 KLSIPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|315320478|ref|YP_004072534.1| 30S ribosomal protein S2 [Thalassiosira oceanica CCMP1005] gi|283568951|gb|ADB27488.1| 30S ribosomal protein S2 [Thalassiosira oceanica CCMP1005] Length = 232 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 141/224 (62%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + QLL++GV FGH+ + WNPKM YI+ ERNN HI+DL QT +L++A ++ + Sbjct: 4 INLAQLLKAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQTAQLLKRANSYVTKAASN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 LF+ TK QAS + E A Y VN +WLGGM+TNW T+ I++L+ LE+ + Sbjct: 64 NKTFLFIGTKRQASAVIAEQANSCNAYYVNHRWLGGMLTNWVTLKSRIERLKTLEQ---Q 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE ++ +KL++ L+G+++M LPD+ ++D RE A+QE R+L Sbjct: 121 EVDGVFALLPKKEASLRSKELEKLRKHLNGVKNMTRLPDVAIIIDQKREMTAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI++++DTN +PDLVD IPGNDD+ RSI L + + +G Sbjct: 181 IPIISILDTNCDPDLVDIPIPGNDDAVRSIKLILSSLTESIKNG 224 >gi|149196189|ref|ZP_01873244.1| ribosomal protein S2 [Lentisphaera araneosa HTCC2155] gi|149140450|gb|EDM28848.1| ribosomal protein S2 [Lentisphaera araneosa HTCC2155] Length = 345 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 143/222 (64%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I LLE+GV FGH+ WNPKM+ YI+ RN HI DLS+T+ L A + + TVA GG Sbjct: 5 ITDLLEAGVHFGHQTRRWNPKMKPYIYGSRNGIHIFDLSKTMVALNNACKFLYSTVADGG 64 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LF+ TK Q+ + V EAAK S + ++ +WLGG +TN T+ +S+ KL+ ++ E Sbjct: 65 DVLFIGTKRQSQEIVEEAAKASNMHYISYRWLGGTLTNLTTIRKSVAKLKKYTKM---EE 121 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KK I R++ KL+ +L GI D+ P ++ +VD N+E +AI+EA+ L IP Sbjct: 122 DGTLDAMKKKAASQIRREKTKLENSLSGIVDLQKPPAVVVIVDINKEHIAIKEAQSLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA++D+NSNPD V Y IPGNDD+ RS+ + D +++A + G Sbjct: 182 VVAILDSNSNPDTVAYGIPGNDDAVRSVQVIFDQLSAAVVAG 223 >gi|325335595|gb|ADZ11869.1| Ribosomal protein S2 [Riemerella anatipestifer RA-GD] Length = 264 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 95/230 (41%), Positives = 149/230 (64%), Gaps = 5/230 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LLE+GV FGH WNP M YIF E+N HIIDL +T L++A + Sbjct: 15 MAKVNVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIIDLHKTAVKLEEACSALEKI 74 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 75 TSAGRKVLFVATKKQAKEVVAKHASELNMPYITERWPGGMLTNFVTIRKAVKKMNAIDKM 134 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +KKERL ++R+R L++ L I DM LP +FVVD RE +A+ EA++ Sbjct: 135 --KKDGTFETLSKKERLQVDRQRANLEKNLGSIADMVRLPSAIFVVDIMREHIAVTEAKK 192 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 L IP+ A+VDTNS+P VDYVIPGNDD+S+SI + V++A +G+ ++ Sbjct: 193 LGIPVFAIVDTNSDPRKVDYVIPGNDDASKSIDMILGQVSAAIKEGLTQR 242 >gi|88802060|ref|ZP_01117588.1| 30S ribosomal protein S2 [Polaribacter irgensii 23-P] gi|88782718|gb|EAR13895.1| 30S ribosomal protein S2 [Polaribacter irgensii 23-P] Length = 279 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 105/273 (38%), Positives = 164/273 (60%), Gaps = 15/273 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + I++LL++GV FGH WNP M YI+ ERN HIIDL +T +++ + ++ Sbjct: 1 MAKVNIQELLDNGVHFGHLTRKWNPNMAPYIYTERNGVHIIDLYKTAAKIEETSEALNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA D V E AK + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 ANSGRKILFVATKKQAKDIVAEKAKAINMPYITERWPGGMLTNFVTIRKAVKKMALIDRM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K + F +K+E+L I R+R+KL++ L I DM LP +F+VD +E +A+ EA++ Sbjct: 121 --KTDGSFDALSKREKLQINRQREKLEKNLGSISDMTRLPGALFIVDIKKEHIAVAEAQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VDYVIP NDD+S+SI V A +G+ +D K+ Sbjct: 179 LNIPIFAMVDTNSDPRQVDYVIPANDDASKSIDKVLSFVTDAIAEGL--------SDRKA 230 Query: 240 AGETVVHSKE--GMQLEEDSQSSESSVLDGQEV 270 E V +KE + EE + +E+ ++ +V Sbjct: 231 DKEKVKDTKEVAAPETEEVAPKAETPKVEEAKV 263 >gi|325955158|ref|YP_004238818.1| ribosomal protein S2 [Weeksella virosa DSM 16922] gi|323437776|gb|ADX68240.1| ribosomal protein S2 [Weeksella virosa DSM 16922] Length = 249 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 145/228 (63%), Gaps = 5/228 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LL +GV FGH WNP M YIF E+N HIIDL +T L +A + + Sbjct: 1 MAKINVKDLLNAGVHFGHLTRKWNPHMAPYIFMEKNGIHIIDLHKTAVKLDEASEALGKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V + A+ + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGRKILFVATKKQAKDVVAKHAEEVNMPYITERWPGGMLTNFVTIRKAVKKMNSIDRM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +KKERL ++R+R KL++ L I DM LP +FVVD RE +AI EA++ Sbjct: 121 --KKDGTFETLSKKERLQVDRQRAKLEKNLGSIADMTRLPSAVFVVDIVREHIAIAEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 L IP+ A+VDTN++P +VDY IP NDD+S+SI + VA + G++ Sbjct: 179 LGIPVFAMVDTNTDPRIVDYAIPANDDASKSIDIILSTVAESIKTGLS 226 >gi|313206968|ref|YP_004046145.1| SSU ribosomal protein s2p [Riemerella anatipestifer DSM 15868] gi|312446284|gb|ADQ82639.1| SSU ribosomal protein S2P [Riemerella anatipestifer DSM 15868] gi|315024044|gb|EFT37046.1| SSU ribosomal protein S2p (SAe) [Riemerella anatipestifer RA-YM] Length = 250 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/230 (41%), Positives = 149/230 (64%), Gaps = 5/230 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LLE+GV FGH WNP M YIF E+N HIIDL +T L++A + Sbjct: 1 MAKVNVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIIDLHKTAVKLEEACSALEKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 TSAGRKVLFVATKKQAKEVVAKHASELNMPYITERWPGGMLTNFVTIRKAVKKMNAIDKM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +KKERL ++R+R L++ L I DM LP +FVVD RE +A+ EA++ Sbjct: 121 --KKDGTFETLSKKERLQVDRQRANLEKNLGSIADMVRLPSAIFVVDIMREHIAVTEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 L IP+ A+VDTNS+P VDYVIPGNDD+S+SI + V++A +G+ ++ Sbjct: 179 LGIPVFAIVDTNSDPRKVDYVIPGNDDASKSIDMILGQVSAAIKEGLTQR 228 >gi|332291329|ref|YP_004429938.1| ribosomal protein S2 [Krokinobacter diaphorus 4H-3-7-5] gi|332169415|gb|AEE18670.1| ribosomal protein S2 [Krokinobacter diaphorus 4H-3-7-5] Length = 278 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 99/238 (41%), Positives = 152/238 (63%), Gaps = 7/238 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL++GV FGH W+P M YI+ ERN HII+L +T +++ + + A G Sbjct: 7 IKELLDAGVHFGHLTRRWDPNMAPYIYMERNGIHIINLYKTAAKIEETCEALQKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA D V E A+ + + +W GGM+TN+ T+ ++++K++ ++++ K++ Sbjct: 67 KILFVATKKQAKDIVAEKARNANMPYITERWPGGMLTNFVTIRKAVKKMQTIDQM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +KKE+L + R R+KL + L I DM LP +FVVD RE +AI+EA++L IPI Sbjct: 125 GRFDTLSKKEKLQMNRLREKLDKNLGSISDMTRLPGALFVVDIKREHIAIKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 A+VDTNS+P VDY+IP NDD+S+SI V+ A G+A + + G D G+ Sbjct: 185 FAMVDTNSDPREVDYLIPANDDASKSIDKIVGFVSEAVSAGLADRKA--GKDAAKEGD 240 >gi|319953572|ref|YP_004164839.1| ssu ribosomal protein s2p [Cellulophaga algicola DSM 14237] gi|319422232|gb|ADV49341.1| SSU ribosomal protein S2P [Cellulophaga algicola DSM 14237] Length = 362 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/230 (41%), Positives = 146/230 (63%), Gaps = 5/230 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T L++A + + A Sbjct: 4 KIVVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKLEEANEALKKIAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +ILFVATK QA D V E + + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 64 SGRKILFVATKKQAKDIVSEKVSKVNMPYITERWPGGMLTNFVTIRKAVKKMATIDRM-- 121 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ F +KKERL ++R R KL++ L I +M LP +F+VDT RE +A++EA +L Sbjct: 122 KKDGTFLTLSKKERLQVDRLRAKLEKNLGSISEMTRLPGALFIVDTMREHIAVKEAIKLN 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPI A+ DTNS+P L+DY+IP NDD+S+SI V A +G++ + S Sbjct: 182 IPIFAMADTNSDPRLLDYIIPSNDDASKSIEAILTHVTDAIAEGLSERKS 231 >gi|282898568|ref|ZP_06306556.1| Ribosomal protein S2 [Cylindrospermopsis raciborskii CS-505] gi|281196436|gb|EFA71345.1| Ribosomal protein S2 [Cylindrospermopsis raciborskii CS-505] Length = 263 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/227 (41%), Positives = 138/227 (60%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAQLMDDAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEANRCGSHYINQRWLGGMLTNWATIKTRADRLKDLER- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE + Sbjct: 120 --REENGALDLLPKKEASMLRREMSKLQKYLGGIKNMRKVPDVVIIVDQRREYNAVQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPIV+++DTN +PD VD IP NDD+ RSI L +A A +G Sbjct: 178 KLSIPIVSMLDTNCDPDTVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|162072729|gb|ABX82362.1| 30S ribosomal protein S2 [Chlamydia trachomatis] Length = 284 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 96/229 (41%), Positives = 143/229 (62%), Gaps = 1/229 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T ++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTSKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKR 229 >gi|86131446|ref|ZP_01050044.1| 30S ribosomal protein S2 [Dokdonia donghaensis MED134] gi|85817891|gb|EAQ39059.1| 30S ribosomal protein S2 [Dokdonia donghaensis MED134] Length = 266 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 152/237 (64%), Gaps = 7/237 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL++GV FGH W+P M YI+ ERN HII+L +T +++ + + A G Sbjct: 7 IKELLDAGVHFGHLTRRWDPNMAPYIYMERNGIHIINLYKTAAKIEETCEALQKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA D V E A+ + + +W GGM+TN+ T+ ++++K++ ++ + K++ Sbjct: 67 KILFVATKKQAKDIVAEKARNANMPYITERWPGGMLTNFVTIRKAVKKMQTIDRM--KQD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +KKE+L + R R+KL++ L I DM LP +FVVD RE +AI+EA++L IPI Sbjct: 125 GRFDTLSKKEKLQMNRLREKLEKNLGSISDMTRLPGALFVVDIKREHIAIKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 A+VDTNS+P VDY+IP NDD+S+SI V+ A G+A + + G D + G Sbjct: 185 FAMVDTNSDPREVDYLIPANDDASKSIDKIVGFVSDAVSAGLADRKA--GKDAQKEG 239 >gi|47459011|ref|YP_015873.1| 30S ribosomal protein S2 [Mycoplasma mobile 163K] gi|61215556|sp|Q6KIB4|RS2_MYCMO RecName: Full=30S ribosomal protein S2 gi|47458339|gb|AAT27662.1| 30S ribosomal protein s2 [Mycoplasma mobile 163K] Length = 300 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 93/215 (43%), Positives = 139/215 (64%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LLE+G FGH+ LWNPKM+ +I ++ THIID++QT L+ A ++I +G Sbjct: 26 QKLLEAGTYFGHKASLWNPKMKPFIHSKKMGTHIIDIAQTRKALEYAYKLIEKYAQKGAS 85 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 +FV TK QA D V A R+ V+ +WLGG +TN +T+ ++ L DLE+L + Sbjct: 86 FIFVGTKKQAKDVVKAQALRTNSIYVSERWLGGTLTNSRTIMNQVRTLSDLEKLEESGYE 145 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 G+TKKE + +K KL+R L GIR+M LP +M V D N +K+AI+EA+R I I+ ++ Sbjct: 146 GYTKKEGVEFSKKLAKLQRNLTGIRNMKHLPQVMIVADVNTDKIAIKEAQRKNIKIIGIL 205 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 DTNS+P LV++ IP NDDS +S+ L ++A A + Sbjct: 206 DTNSDPSLVNFGIPANDDSVKSLNLIITILADAIV 240 >gi|253682385|ref|ZP_04863182.1| ribosomal protein S2 [Clostridium botulinum D str. 1873] gi|253562097|gb|EES91549.1| ribosomal protein S2 [Clostridium botulinum D str. 1873] Length = 233 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 143/222 (64%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + VA Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSVVAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ-KLRDLEELLN 124 G +LFV TK QA + + E + RS + VN++WLGGM+TN+KT+ I + + Sbjct: 64 GKEVLFVGTKKQAQEAIEEESLRSGMHFVNNRWLGGMLTNFKTIRTRINKLEELEKMEED 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRLRIP 183 + KKE + + +++KL++ L GI+++ MF+VD +EK AI EA+ L IP Sbjct: 124 GTFEVLPKKEVIKLRNEKEKLEKNLGGIKNLDASKLGAMFIVDPRKEKNAIAEAKNLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 184 VVAIVDTNCDPDEIDYVIPGNDDAIRAVRLITSKIADAIIEG 225 >gi|153954042|ref|YP_001394807.1| 30S ribosomal protein S2 [Clostridium kluyveri DSM 555] gi|219854655|ref|YP_002471777.1| hypothetical protein CKR_1312 [Clostridium kluyveri NBRC 12016] gi|189044932|sp|A5N828|RS2_CLOK5 RecName: Full=30S ribosomal protein S2 gi|254764470|sp|B9E1I8|RS2_CLOK1 RecName: Full=30S ribosomal protein S2 gi|146346923|gb|EDK33459.1| RpsB [Clostridium kluyveri DSM 555] gi|219568379|dbj|BAH06363.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 234 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 100/222 (45%), Positives = 142/222 (63%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLESGV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + + Sbjct: 4 ISMKQLLESGVHFGHQTRRWNPKMASYIFTERNGIYIIDLQKTVRKIEEAYEFVKKIASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI-QKLRDLEELLN 124 G ILF+ TK QA + + E AKRS + VN++WLGGM+TN+ T+ I + + + Sbjct: 64 GKDILFIGTKKQAQEAIKEEAKRSNMHYVNNRWLGGMLTNFLTIRNRIGKLEELEKMEED 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRLRIP 183 + +KKE + + ++ KL+R L GI+ M +FVVD +EK AI EA+ L IP Sbjct: 124 GTFEVLSKKEVIKLRNEKQKLERNLGGIKAMNAENVGALFVVDPRKEKNAISEAKILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN +PD VDYVIPGNDD+ R++ L VA A I+G Sbjct: 184 VVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITSKVADAVIEG 225 >gi|218247369|ref|YP_002372740.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 8801] gi|257061297|ref|YP_003139185.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 8802] gi|226697635|sp|B7K4S8|RS2_CYAP8 RecName: Full=30S ribosomal protein S2 gi|218167847|gb|ACK66584.1| ribosomal protein S2 [Cyanothece sp. PCC 8801] gi|256591463|gb|ACV02350.1| ribosomal protein S2 [Cyanothece sp. PCC 8802] Length = 268 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 95/226 (42%), Positives = 141/226 (62%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM YI+ RN HIIDL QT +++ A + + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAQLMENAYEYVRKS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LF+ TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 SEQGKRFLFIGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKGRVERLKELESM 120 Query: 123 LNKENQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +EN + KKE + R+ KL + L GI+ M LPD++ +VD RE AI E ++ Sbjct: 121 --EENGAISRRPKKEAAVLRRELGKLDKYLGGIKTMRKLPDVVVIVDQRREYNAISECQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IPI++++DTN +PD D IP NDD+ RSI L +A A +G Sbjct: 179 LGIPIISMLDTNCDPDFADIPIPANDDAIRSIKLILGKLADAIYEG 224 >gi|242620028|ref|YP_003002032.1| 30S ribosomal protein S2 [Aureococcus anophagefferens] gi|239997273|gb|ACS36796.1| 30S ribosomal protein S2 [Aureococcus anophagefferens] Length = 226 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 90/214 (42%), Positives = 136/214 (63%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + I QLL++GV FGH+ WNPKM YI+ ERN HI+DL QT +LQ+A + Sbjct: 1 MAEIKIAQLLKAGVHFGHKTPRWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDFVQLA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA++ + E A R+ + +N +W GG++TNW+TV IQ L LE Sbjct: 61 AEQGKTFLFVGTKPQAAELIKEEALRADSFYINHRWYGGLLTNWQTVKGRIQTLHTLEAQ 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 KKE ++ ++ KL+ L+G+++M G+PD+M V+D N E A++EA +L I Sbjct: 121 EETIFPTLPKKESASLRKELTKLRSQLNGVKNMSGVPDIMIVIDQNYELTAVREAIKLNI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 PI++++D+N +PDL+D IPGNDD+ SI + + Sbjct: 181 PIISILDSNCDPDLIDIPIPGNDDAISSIKIILE 214 >gi|284929067|ref|YP_003421589.1| 30S ribosomal protein S2P [cyanobacterium UCYN-A] gi|284809526|gb|ADB95231.1| SSU ribosomal protein S2P [cyanobacterium UCYN-A] Length = 272 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/269 (38%), Positives = 166/269 (61%), Gaps = 5/269 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + Sbjct: 1 MPVVSLSELLESGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNG 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 SDKGKRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM 120 Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE ++L Sbjct: 121 EESGQIEKRPKKEGAVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+++++DTN +PD D IP NDD+ RSI L +A A +G R+ + D +++ Sbjct: 181 IPMISLLDTNCDPDYADIPIPANDDAIRSIKLILGKLADAIDEGSHRRVN-ANDDYETSD 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E+ + + ++ E+S +S SS L+G+ + Sbjct: 240 ESFIENN--IEKIEES-TSVSSSLEGENI 265 >gi|87124309|ref|ZP_01080158.1| 30S ribosomal protein S2 [Synechococcus sp. RS9917] gi|86167881|gb|EAQ69139.1| 30S ribosomal protein S2 [Synechococcus sp. RS9917] Length = 239 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 9/235 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCV-MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 R LFV TK QAS+ V +EA++ A Y VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 65 KRFLFVGTKKQASEVVALEASRCGASY-VNQRWLGGMLTNWTTMKARIDRLKDLERM--- 120 Query: 126 ENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVILVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + GAD Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGANDQRGAD 235 >gi|166367234|ref|YP_001659507.1| 30S ribosomal protein S2 [Microcystis aeruginosa NIES-843] gi|189044944|sp|B0JTL2|RS2_MICAN RecName: Full=30S ribosomal protein S2 gi|166089607|dbj|BAG04315.1| 30S ribosomal protein S2 [Microcystis aeruginosa NIES-843] Length = 265 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 147/224 (65%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM +YI+ RN HIIDL QT ++++A + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLIEEAYEFVRGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RG R LF+ TK QA+ + + A RS + VN +WLGGM+TNW+T+ +++L++LEEL Sbjct: 61 ADRGKRFLFIGTKRQAAAIIKQEALRSGSHFVNQRWLGGMLTNWETIRGRVERLKELEEL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI+ M LPDL+ VVD RE AIQE ++L Sbjct: 121 ENSGALDKRPKKEASVLRRELGKLEKYLGGIKTMRRLPDLVVVVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI++++DTN +PDLVD IP NDD+ RS+ L ++ A I+G Sbjct: 181 IPIISLLDTNCDPDLVDVPIPANDDAIRSVKLILGKISDAIIEG 224 >gi|282898427|ref|ZP_06306417.1| Ribosomal protein S2 [Raphidiopsis brookii D9] gi|281196593|gb|EFA71499.1| Ribosomal protein S2 [Raphidiopsis brookii D9] Length = 263 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 95/227 (41%), Positives = 138/227 (60%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAQLMDDAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEANRCGSHYINQRWLGGMLTNWATIKTRADRLKDLER- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE + Sbjct: 120 --REENGALDLLPKKEASMLRREMSKLQKYLGGIKNMRKVPDVVIIVDQRREYNAVQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPIV+++DTN +PD VD IP NDD+ RSI L +A A +G Sbjct: 178 KLSIPIVSMLDTNCDPDTVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|15829004|ref|NP_326364.1| 30S ribosomal protein S2 [Mycoplasma pulmonis UAB CTIP] gi|25009219|sp|Q98Q36|RS2_MYCPU RecName: Full=30S ribosomal protein S2 gi|14089948|emb|CAC13706.1| 30S RIBOSOMAL PROTEIN S2 [Mycoplasma pulmonis] Length = 330 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 87/216 (40%), Positives = 142/216 (65%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 + LE+GV FGHR WNPKM+++I +R HI+D+S+T L+ A ++I+ A+G Sbjct: 28 KFLEAGVYFGHRTQQWNPKMKKFIHSKRRGIHILDVSKTSKALEWAYKIINAAAAKGATF 87 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 +FV TK A + V E A+R+ Y V +WLGG +TN KT+ +++L DLE++ +G Sbjct: 88 IFVGTKKHAKEIVKEQAQRTNSYYVTERWLGGTLTNSKTIFSRVRRLFDLEKMAENNFEG 147 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +TKKE + +++ KL++ +GIR+M P+ M VVD N +++A++EAR + I+ ++D Sbjct: 148 YTKKEGIEFKKELSKLQKNFEGIREMKTQPNFMIVVDPNVDRIAVKEARDKGVKIIGILD 207 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++NPD VD IP NDDS +SI+L ++A A ++ Sbjct: 208 SDANPDFVDLGIPANDDSIKSISLILTVLADAIVNA 243 >gi|254519199|ref|ZP_05131255.1| ribosomal protein S2 [Clostridium sp. 7_2_43FAA] gi|226912948|gb|EEH98149.1| ribosomal protein S2 [Clostridium sp. 7_2_43FAA] Length = 233 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 145/224 (64%), Gaps = 6/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYNFIKEVAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E A RS + VN++WLGGM+TN+KT+ I +L L+ + + Sbjct: 64 GKDILFVGTKKQAQEAIEEEAIRSNMHFVNNRWLGGMLTNFKTIKTRINRLETLKTM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRLR 181 E+ F KKE + ++ + +KL++ L GI+++ +FVVD +EK AI EA+ L Sbjct: 122 EDGTFEVLPKKEVIKLKGEMEKLEKNLGGIKNLDSTNIGAIFVVDPRKEKNAISEAKILG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V +VDTN +P+ VDYVIPGNDD+ R++ L +A I+G Sbjct: 182 IPVVGIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKIADGIIEG 225 >gi|332879691|ref|ZP_08447382.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682318|gb|EGJ55224.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 239 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 96/225 (42%), Positives = 149/225 (66%), Gaps = 5/225 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + VA G Sbjct: 7 IKELLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALKKIVASGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++++ K++ Sbjct: 67 KVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSIDKM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA+RL IPI Sbjct: 125 GTFDTLSKREKLHVERLREKLEKNLGSIADMSRLPGALFVVDTLREHIAVKEAQRLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 A+VDTNS+P VD+ IP NDD+S+SI + A +G+A + Sbjct: 185 FAMVDTNSDPREVDFAIPANDDASKSIDKVLSYITEAVNEGLANR 229 >gi|154491981|ref|ZP_02031607.1| hypothetical protein PARMER_01612 [Parabacteroides merdae ATCC 43184] gi|218264808|ref|ZP_03478502.1| hypothetical protein PRABACTJOHN_04212 [Parabacteroides johnsonii DSM 18315] gi|154088222|gb|EDN87267.1| hypothetical protein PARMER_01612 [Parabacteroides merdae ATCC 43184] gi|218221781|gb|EEC94431.1| hypothetical protein PRABACTJOHN_04212 [Parabacteroides johnsonii DSM 18315] Length = 280 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 96/234 (41%), Positives = 148/234 (63%), Gaps = 2/234 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+GV FGH WNP M YIF ERN HIIDL +TV + +A +V+ + +G ++ Sbjct: 8 QLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKNLAKQGKKV 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA V + A V +W GGM+TN+ T+ ++I+K+ ++++ Sbjct: 68 LFVATKKQAKQVVADKASSVGMPYVIERWPGGMLTNFPTIRKAIKKMATIDKMTKDGTFD 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E+L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKREKLQITRQRAKLEKTLGSIVDLTRLPSALFVVDVMKEHIAVREANRLGIPVFGMV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 DTNS+P+ +DYVIP NDD+++S+ + + A +G+ ++ DT++AGE Sbjct: 188 DTNSDPNNIDYVIPANDDATKSVEVILGAICEAMNEGL-QERKAEKIDTEAAGE 240 >gi|11466379|ref|NP_038382.1| ribosomal protein S2 [Mesostigma viride] gi|14548251|sp|Q9MUS8|RR2_MESVI RecName: Full=30S ribosomal protein S2, chloroplastic gi|7259522|gb|AAF43823.1|AF166114_35 ribosomal protein S2 [Mesostigma viride] Length = 228 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 138/222 (62%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH+ WNPKM YI+ RN H+IDL QT +L +A + + G Sbjct: 6 LEEMMEAGVHFGHQTRGWNPKMSSYIYGNRNGIHLIDLVQTARLLSEACDFLFNAAKEGK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 LFV TKSQASD + A R+ + VN +WLGGM+TNW T+ I+KL+DLE+ KE Sbjct: 66 EFLFVGTKSQASDIIASEALRAESHYVNQRWLGGMLTNWSTIKTRIRKLKDLEQ---KEK 122 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KKE ++R+ KL++ L G++DM LPD++ +VD RE A++E +L IP Sbjct: 123 NGILDTLPKKEAAVLKRQLYKLRKYLSGLQDMKYLPDVVIIVDQKREINAVKECIKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++VDTN +P L D IP NDD+ RSI L +A A +G Sbjct: 183 TISLVDTNCDPTLADLPIPANDDAIRSINLLVSKLADAIYEG 224 >gi|291571517|dbj|BAI93789.1| 30S ribosomal protein S2 [Arthrospira platensis NIES-39] Length = 265 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LESGV FGH+ WNP+M YIF ERN HIIDL QT ++ A + Sbjct: 1 MPVISLADMLESGVHFGHQTRRWNPRMAPYIFTERNGVHIIDLVQTAQLMDDAYDYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ + +L+DLE Sbjct: 61 SEEGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWVTIKTRVDRLKDLEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +EN G KKE + R+ KL++ L G++ M +PD + +VD RE A+ E R Sbjct: 120 --RENSGQLDYLPKKEAAVLRREMGKLQKYLGGLKGMRRVPDAVIMVDQRREYNAVMECR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPI+A++DTN +PDL D IP NDD+ R+I L +A +G Sbjct: 178 KLGIPIIALLDTNCDPDLADIHIPANDDAIRAIKLIIGKLADGIYEG 224 >gi|119511269|ref|ZP_01630384.1| 30S ribosomal protein S2 [Nodularia spumigena CCY9414] gi|119464060|gb|EAW44982.1| 30S ribosomal protein S2 [Nodularia spumigena CCY9414] Length = 263 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 149/263 (56%), Gaps = 16/263 (6%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAQLMDNAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ +L+DLE Sbjct: 61 SEQGKKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRADRLKDLER- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E G KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE + Sbjct: 120 --REENGALDLLPKKEASMLRREMTKLQKYLGGIKNMRKVPDVVVIVDQRREYNAVQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L +PIV+++DTN +PD+VD IP NDD+ RSI L +A A Y G Sbjct: 178 KLGLPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAI---------YEGRGGT 228 Query: 239 SAGETVVHSKEGMQLEEDSQSSE 261 GE +G + ++D SE Sbjct: 229 LEGEDDYEDYDGSEYDDDYDESE 251 >gi|189500934|ref|YP_001960404.1| 30S ribosomal protein S2 [Chlorobium phaeobacteroides BS1] gi|189496375|gb|ACE04923.1| ribosomal protein S2 [Chlorobium phaeobacteroides BS1] Length = 260 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 139/221 (62%), Gaps = 7/221 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +F + +L +GV FGH W PKM+ YIF E+N HIIDL +T+ M + A++ I Sbjct: 8 RFQLEDMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLKKTLVMAEDAMKAIEAIAM 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G I+FV TK QA + A+++ V+ +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 68 TGREIMFVGTKKQAKAIISAEAEQAGMPYVSERWLGGMLTNFSTIRQSIRRMNSIDRM-- 125 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G TKKERL + R+++KL R L GI M LP +FVVD +E +A++EAR L Sbjct: 126 -ETDGTFDMITKKERLMLVREKEKLMRILGGIATMTRLPAALFVVDIKKEHIAVREARSL 184 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IPI A+VDTN +PD VDYVIP NDD+ RSI L VA + Sbjct: 185 GIPIFALVDTNCDPDEVDYVIPANDDAIRSIQLMVKGVAES 225 >gi|284050348|ref|ZP_06380558.1| 30S ribosomal protein S2 [Arthrospira platensis str. Paraca] Length = 265 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 135/227 (59%), Gaps = 7/227 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LESGV FGH+ WNP+M YIF ERN HIIDL QT ++ A + Sbjct: 1 MPVISLADMLESGVHFGHQTRRWNPRMAPYIFTERNGVHIIDLVQTAQLMDDAYDYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ + +L+DLE Sbjct: 61 SEEGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWVTIKTRVDRLKDLEA- 119 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +EN G KKE + R+ KL++ L G++ M +PD + +VD RE A+ E R Sbjct: 120 --RENSGQLDYLPKKEAAVLRREMGKLQKYLGGLKGMRRVPDAVIMVDQRREYNAVMECR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IPI+A++DTN +PDL D IP NDD+ R+I L +A +G Sbjct: 178 KLGIPIIALLDTNCDPDLADIHIPANDDAIRAIKLIIGKLADGIYEG 224 >gi|305665268|ref|YP_003861555.1| 30S ribosomal protein S2 [Maribacter sp. HTCC2170] gi|88710022|gb|EAR02254.1| 30S ribosomal protein S2 [Maribacter sp. HTCC2170] Length = 374 Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 150/241 (62%), Gaps = 5/241 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++LLE+GV FGH WNP M YI+ ERN H+I+L +TV L +A + + Sbjct: 1 MAKVEVKELLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTVAKLDEANEALKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V + + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGRKILFVATKKQAKDIVADKVANVNMPYITERWPGGMLTNFVTIRKAVKKMASIDRM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +KKERL ++R R KL++ L I +M LP +F+VDT RE +A++EA++ Sbjct: 121 --KKDGTFLTLSKKERLQVDRLRAKLEKNLGSISEMTRLPGALFIVDTMREHIAVKEAQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTN +P VD+V+P NDD+S+SI + V A +G+A + + D Sbjct: 179 LNIPIFAMVDTNCDPRDVDFVVPSNDDASKSIEIIMTQVTDAVAEGLAERKAEKQGDAPK 238 Query: 240 A 240 A Sbjct: 239 A 239 >gi|301055317|ref|YP_003793528.1| C-terminal part of ribosomal protein S2 [Bacillus anthracis CI] gi|300377486|gb|ADK06390.1| C-terminal part of ribosomal protein S2 [Bacillus cereus biovar anthracis str. CI] Length = 207 Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 89/200 (44%), Positives = 140/200 (70%), Gaps = 5/200 (2%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+RYIF ERN +IIDL +TV +++A +V+ D A GG ILFV TK QA + + E A R Sbjct: 1 MKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIAAEGGDILFVGTKKQAQEAIKEEATR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKL 145 + Y VN +WLGG +TN++T+ + I++L+D+E + +E+ F KKE + ++++ ++L Sbjct: 61 AGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM--QEDGTFEVLPKKEVVQLKKELERL 118 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGND 205 ++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI+ +VDTN +PD +D+VIP ND Sbjct: 119 EKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDHVIPAND 178 Query: 206 DSSRSIALFCDLVASAAIDG 225 D+ R++ L +A A ++ Sbjct: 179 DAIRAVKLLTSKMADAILEA 198 >gi|150016072|ref|YP_001308326.1| 30S ribosomal protein S2 [Clostridium beijerinckii NCIMB 8052] gi|189044931|sp|A6LSP0|RS2_CLOB8 RecName: Full=30S ribosomal protein S2 gi|149902537|gb|ABR33370.1| ribosomal protein S2 [Clostridium beijerinckii NCIMB 8052] Length = 233 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 146/224 (65%), Gaps = 6/224 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKAEEAYNFVKQVAEE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E A RS + VN++WLGGM+TN+ T+ I+KL +E++ + Sbjct: 64 GKDILFVGTKKQAQEAIQEEAIRSNMHFVNNRWLGGMLTNFSTIRGRIRKLEQIEKM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRLR 181 E+ F KKE + ++ + +KL++ L GIR++ MF+VD +EK AI EA+ L Sbjct: 122 EDGTFDVLPKKEVIKLKGEMEKLEKNLGGIRNLDASNVGAMFIVDPRKEKNAILEAKILG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G Sbjct: 182 IPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIMEG 225 >gi|167756896|ref|ZP_02429023.1| hypothetical protein CLORAM_02445 [Clostridium ramosum DSM 1402] gi|167703071|gb|EDS17650.1| hypothetical protein CLORAM_02445 [Clostridium ramosum DSM 1402] Length = 304 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 96/220 (43%), Positives = 144/220 (65%), Gaps = 7/220 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + A + +++ A+ Sbjct: 21 ISMKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLQKSSKKIDDAYKAMNEIAAK 80 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LFV TK QA + V E A RS + VNS+WLGG +TN+KT+ + I++L +LE++ Sbjct: 81 GGKVLFVGTKKQAQEAVKEEAIRSESFYVNSRWLGGTLTNFKTIQKRIRRLIELEKM--- 137 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + ++++ KL++ L GI++M LP+ +FVVD E A+ EA+ L Sbjct: 138 EADGTFDLLPKKEVILLKKEAAKLEKNLGGIKEMRRLPNALFVVDPKAEHNAVAEAKILG 197 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP+ +VDTN +PD VDYVIP NDD+ R++ L +A A Sbjct: 198 IPVFGIVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADA 237 >gi|307151121|ref|YP_003886505.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 7822] gi|306981349|gb|ADN13230.1| ribosomal protein S2 [Cyanothece sp. PCC 7822] Length = 270 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 142/222 (63%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +LLESGV FGH+ WNPKM YI+ RN HIIDL QT ++++A + +G Sbjct: 5 TLNELLESGVHFGHQTRRWNPKMAPYIYTARNGVHIIDLVQTAELIEEAYDYMRKAADQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + LFV TK QA+ + + A R VN +WLGGM+TNW+T+ ++L++LEE+ +E Sbjct: 65 KKFLFVGTKRQAAGIIAQEALRCGSNFVNQRWLGGMLTNWETIRTRAERLKELEEM--EE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + KKE + R+ KL++ L GI+ M +PD++ ++D RE A+QE ++L IP Sbjct: 123 SGAISRRPKKEAAVLRRELFKLQKYLGGIKTMRRIPDVVVIIDLKREYNAVQECQKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IVA++DTN +PD VD IPGNDD+ RSI L +A A +G Sbjct: 183 IVALLDTNCDPDYVDVPIPGNDDAIRSIKLIIGKLADAIYEG 224 >gi|209524187|ref|ZP_03272737.1| ribosomal protein S2 [Arthrospira maxima CS-328] gi|209495278|gb|EDZ95583.1| ribosomal protein S2 [Arthrospira maxima CS-328] Length = 315 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 137/229 (59%), Gaps = 7/229 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + +P ++ +LESGV FGH+ WNP+M YIF ERN HIIDL QT ++ A + Sbjct: 49 LIMPVISLADMLESGVHFGHQTRRWNPRMAPYIFTERNGVHIIDLVQTAQLMDDAYDYVR 108 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ + +L++LE Sbjct: 109 SASEQGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWVTIKTRVDRLKELE 168 Query: 121 ELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 +EN G KKE + R+ KL++ L G++ M +PD + +VD RE A+ E Sbjct: 169 A---RENSGQLDYLPKKEAAVLRREMGKLQKYLGGLKGMRRVPDAVIMVDQRREYNAVME 225 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 R+L IPI+A++DTN +PDL D IP NDD+ R+I L +A +G Sbjct: 226 CRKLGIPIIALLDTNCDPDLADIHIPANDDAIRAIKLIVGKLADGIYEG 274 >gi|124112118|ref|YP_001019101.1| ribosomal protein S2 [Chlorokybus atmophyticus] gi|209573730|sp|Q19VA1|RR2_CHLAT RecName: Full=30S ribosomal protein S2, chloroplastic gi|124012225|gb|ABD62250.2| ribosomal protein S2 [Chlorokybus atmophyticus] Length = 228 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 140/223 (62%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+GV FGH+ WNPKM YI+ ERN H+IDL QT +L +A + + G Sbjct: 5 TLEEMMEAGVHFGHQTRGWNPKMAPYIYGERNGIHLIDLIQTARLLSEASDFVLNAAKEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 LF+ TK+QA+D + A R + VN +WLGGM+TNW T+ I++L+DLE+ E Sbjct: 65 KEFLFIGTKNQAADIISSEALRCRSHFVNQRWLGGMLTNWPTIKTRIKRLKDLEQ---SE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE ++R+ DKL++ L G++DM LPD++ +VD RE A++E +L I Sbjct: 122 KNGTLDNLPKKESAVLKRQLDKLRKYLGGLQDMKTLPDVVIIVDQKREMNAVRECIKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI+A++DTN +P L D IP NDD+ RS+ L +A A +G Sbjct: 182 PIIALLDTNCDPSLSDLPIPANDDAIRSVNLIISKLADAIYEG 224 >gi|242624342|ref|YP_003002260.1| 30S ribosomal protein S2 [Aureoumbra lagunensis] gi|239997450|gb|ACS36972.1| 30S ribosomal protein S2 [Aureoumbra lagunensis] Length = 225 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 95/218 (43%), Positives = 136/218 (62%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I QLLE+GV GH+ WNPKM YI+ ERN HI+DL QT +LQ+A + +G Sbjct: 6 IAQLLEAGVHLGHKTARWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDYVQSASEQGK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 LFV TK QAS+ + E A R+ + VN +W GG++TNW+TV I L LE+ Sbjct: 66 TFLFVGTKPQASEIIKEEALRANSFYVNHRWYGGLLTNWQTVKGRINTLITLEKEEETLF 125 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KKE N+ ++ KL+ L+GI++M +PD+M V+D N E AI+EA +L IPI+++ Sbjct: 126 ATLPKKESANLRKELTKLQTQLNGIKEMDRIPDVMIVIDQNYELTAIREAIKLNIPIISL 185 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +D+N NPDL+D IPGNDD+ SI + ++ + + G Sbjct: 186 LDSNCNPDLIDVPIPGNDDAITSIKIILRALSDSILMG 223 >gi|282891688|ref|ZP_06300174.1| hypothetical protein pah_c189o007 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498423|gb|EFB40756.1| hypothetical protein pah_c189o007 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 268 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 145/220 (65%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI+ LLE+G FGH+ WNPKM+R+IF ERN +IIDL++T+ ++ A +++ V Sbjct: 9 EVTIKDLLEAGAHFGHQKRRWNPKMKRFIFEERNGLYIIDLAKTLQQIRYAKEIVKQVVE 68 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 ILFV TK QA V + A++ ++ V +WLGGM+TN T+ QSI+KL +E+ + Sbjct: 69 SHKSILFVGTKKQAKAVVRDLAEQCGEFYVCERWLGGMLTNLTTIRQSIKKLERIEKRIA 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +GFTKKE + +++ KL++ L G+R M P L+ VVD ++E LA+ EA +L IP+ Sbjct: 129 AGTEGFTKKEFSLLTKEQIKLEKNLSGVRGMRKPPGLVIVVDPSKEHLAVAEANKLGIPV 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +VDTN +PD ++YVI NDD+ +S+ L +A + I+ Sbjct: 189 MGLVDTNCDPDPIEYVIACNDDALKSVKLIVQALAQSIIE 228 >gi|325281311|ref|YP_004253853.1| ribosomal protein S2 [Odoribacter splanchnicus DSM 20712] gi|324313120|gb|ADY33673.1| ribosomal protein S2 [Odoribacter splanchnicus DSM 20712] Length = 265 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 148/242 (61%), Gaps = 10/242 (4%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LL +G FGH WNPKM YIF ERN+ HIIDL++T ML KA + G +I Sbjct: 8 ELLNAGCHFGHLTRKWNPKMAPYIFMERNDIHIIDLNKTAIMLDKASAALKQIAKSGRKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 LFVATK QA D V E V +W GGM+TN+ T+ ++++K+ ++++ E G Sbjct: 68 LFVATKKQAKDIVAEKISNINMPYVTERWPGGMLTNFPTIRKAVKKMTTIDKM---EKDG 124 Query: 130 ----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +K+E+L I R+R KL + L I D+ LP +FVVD +E +A++EA+ L IP+ Sbjct: 125 TFDHLSKREKLQIARQRAKLDKNLGSIADLTRLPAALFVVDVMKEYIAVKEAKSLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM---GADTKSAGE 242 A+VDTNS+P +D+VIP NDD+S SI+L D VA A +G++ + + G + K A + Sbjct: 185 AMVDTNSDPSCIDFVIPCNDDASTSISLVIDRVADAIKEGLSERKAEKDKEGTEKKPAAK 244 Query: 243 TV 244 V Sbjct: 245 KV 246 >gi|188588779|ref|YP_001920603.1| 30S ribosomal protein S2 [Clostridium botulinum E3 str. Alaska E43] gi|251780655|ref|ZP_04823575.1| 30S ribosomal protein S2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|238689700|sp|B2V4F4|RS2_CLOBA RecName: Full=30S ribosomal protein S2 gi|188499060|gb|ACD52196.1| 30S ribosomal protein S2 [Clostridium botulinum E3 str. Alaska E43] gi|243084970|gb|EES50860.1| 30S ribosomal protein S2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 233 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/228 (44%), Positives = 150/228 (65%), Gaps = 14/228 (6%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVRKAEEAYNFIKEVSTE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA D + + A RS+ + VN++WLGGM+TN+ T+ + I++L ++E + + Sbjct: 64 GKDILFVGTKKQAQDAIKDEAIRSSMHFVNNRWLGGMLTNFSTIKKRIRRLSEIERM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDM-----GGLPDLMFVVDTNREKLAIQEA 177 E+ F KKE + ++ + +KL++ L GI+++ G MFVVD +EK AI EA Sbjct: 122 EDGTFEVLPKKEVIKLKGELEKLEKNLGGIKNLDCDNIGA----MFVVDPRKEKNAISEA 177 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + L IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G Sbjct: 178 KILGIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIMEG 225 >gi|298492970|ref|YP_003723147.1| 30S ribosomal protein S2 ['Nostoc azollae' 0708] gi|298234888|gb|ADI66024.1| ribosomal protein S2 ['Nostoc azollae' 0708] Length = 264 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 137/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + +G Sbjct: 5 SLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAQLMDNAYNYMRSQAEQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ ++L+DLE +E Sbjct: 65 KKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRAERLKDLE---RRE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE +L I Sbjct: 122 ENGALDLLPKKEGSMLRREMTKLQKYLGGIKNMRKVPDVVIIVDQRREYNAVQECEKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Sbjct: 182 PIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|317969802|ref|ZP_07971192.1| 30S ribosomal protein S2 [Synechococcus sp. CB0205] Length = 239 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/223 (43%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ + A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVIALEASRCGAAYVNQRWLGGMLTNWTTMRARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+V+++DTN +PDL D IP NDD+ RS+ L +A A +G Sbjct: 182 PLVSMLDTNCDPDLCDVPIPCNDDAVRSVQLVLGRLADAINEG 224 >gi|254360753|ref|ZP_04976901.1| ribosomal protein S2 [Mannheimia haemolytica PHL213] gi|153091323|gb|EDN73297.1| ribosomal protein S2 [Mannheimia haemolytica PHL213] Length = 240 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 98/201 (48%), Positives = 139/201 (69%), Gaps = 1/201 (0%) Query: 26 NPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEA 85 NPKM+ +IF RN H+I+L +T+P+ +AL ++ + G++LFV TK ASD V A Sbjct: 25 NPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRIASNNGKVLFVGTKRAASDAVKAA 84 Query: 86 AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDK 144 A S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L R+ +K Sbjct: 85 AVESQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQDGTFDKITKKEALMRTRELEK 144 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 L+ +L GI+DM GLPD +FV+ + E +AI+EA L IP+ A+VDTNS PD V+Y+IPGN Sbjct: 145 LELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLGIPVFAIVDTNSTPDGVNYIIPGN 204 Query: 205 DDSSRSIALFCDLVASAAIDG 225 DD++R+I L+ D +A +G Sbjct: 205 DDATRAIQLYLDSAVAAIKEG 225 >gi|187932860|ref|YP_001885456.1| 30S ribosomal protein S2 [Clostridium botulinum B str. Eklund 17B] gi|238691617|sp|B2TJ40|RS2_CLOBB RecName: Full=30S ribosomal protein S2 gi|187721013|gb|ACD22234.1| 30S ribosomal protein S2 [Clostridium botulinum B str. Eklund 17B] Length = 233 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/228 (44%), Positives = 150/228 (65%), Gaps = 14/228 (6%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVRKAEEAYNFIKEVSTE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA D + + A RS+ + VN++WLGGM+TN+ T+ + I++L ++E + + Sbjct: 64 GKDILFVGTKKQAQDAIKDEAIRSSMHFVNNRWLGGMLTNFSTIKKRIRRLSEIETM--Q 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDM-----GGLPDLMFVVDTNREKLAIQEA 177 E+ F KKE + ++ + +KL++ L GI+++ G MFVVD +EK AI EA Sbjct: 122 EDGTFEVLPKKEVIKLKGELEKLEKNLGGIKNLDCDNIGA----MFVVDPRKEKNAISEA 177 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + L IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G Sbjct: 178 KILGIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIMEG 225 >gi|119357802|ref|YP_912446.1| 30S ribosomal protein S2 [Chlorobium phaeobacteroides DSM 266] gi|166225258|sp|A1BHZ5|RS2_CHLPD RecName: Full=30S ribosomal protein S2 gi|119355151|gb|ABL66022.1| SSU ribosomal protein S2P [Chlorobium phaeobacteroides DSM 266] Length = 252 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 98/226 (43%), Positives = 140/226 (61%), Gaps = 7/226 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +F + ++L +GV FGH W PKM+ YIF E+N HIIDL +T+ + AL + Sbjct: 1 MSRFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTLVLADDALNALEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKRIISAEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNSIDRM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G TKKERL + R+++KL R L GI M LP +FVVD +E +AI+EAR Sbjct: 121 ---ETDGTFDMITKKERLMLVREKEKLMRILGGIATMTRLPAALFVVDIKKEHIAIKEAR 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 L IPI A+VDTN +P+LVD++IP NDD+ RSI L VA ++ Sbjct: 178 SLGIPIFAMVDTNCDPELVDFIIPANDDAIRSIQLMVKAVADTIVN 223 >gi|301320885|gb|ADK69528.1| ribosomal protein S2 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 292 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/225 (40%), Positives = 148/225 (65%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLETLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEE--- 120 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E +G TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L Sbjct: 121 EEKKGRLSLRTKKEQIKILKEKTKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A+ DTN++PD++DYVIPGNDD S+ L +++ A +G Sbjct: 181 NIPVIAICDTNADPDMIDYVIPGNDDLQESVNLIINILVEAYAEG 225 >gi|167753566|ref|ZP_02425693.1| hypothetical protein ALIPUT_01843 [Alistipes putredinis DSM 17216] gi|167658191|gb|EDS02321.1| hypothetical protein ALIPUT_01843 [Alistipes putredinis DSM 17216] Length = 283 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 94/216 (43%), Positives = 135/216 (62%), Gaps = 1/216 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNPKM YIF E+N HIIDL +TV L +A + G R+L Sbjct: 9 LLEAGAHFGHLKRKWNPKMAPYIFMEKNGIHIIDLHKTVLKLDEAANALKQIAKSGRRVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA + V E V +W GGM+TN+ T+ ++++K+ ++++ N Sbjct: 69 FVATKKQAKEIVAEKIAAIGMPYVTERWAGGMLTNFPTIRKAVKKMSTIDKMTNDGTFDN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 F+K+E+L I R+R KL++ L I D+ LP +FVVD +E A++EA+RL IP+ A+VD Sbjct: 129 FSKREKLQIARQRAKLEKNLGSIADLTRLPAALFVVDVQKESNAVKEAKRLNIPVFAMVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 T +P +DYVIP NDD+++SIA+ D V A +G Sbjct: 189 TCCDPTDIDYVIPANDDATKSIAVILDAVCGAISEG 224 >gi|304383662|ref|ZP_07366121.1| 30S ribosomal protein S2 [Prevotella marshii DSM 16973] gi|304335186|gb|EFM01457.1| 30S ribosomal protein S2 [Prevotella marshii DSM 16973] Length = 276 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T QLL++G FGH + WNP M YIF ERN HIIDL +TV + +A + + G Sbjct: 5 TFDQLLQAGCHFGHLHRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKQIAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV+TK QA D V E A V +W GGM+TN+ T+ ++++K+ ++ L+N Sbjct: 65 KKILFVSTKKQAKDVVAEKAAAVNMPYVTERWPGGMLTNFPTIRKAVKKMSTIDRLMNDG 124 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ Sbjct: 125 TFSNLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEAIAVKEANRLDIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +VDTNSNP+ +D+VIP NDD+ SI + SA +G+ Sbjct: 185 GIVDTNSNPNDIDFVIPANDDAKDSIEVILSACCSAIAEGL 225 >gi|281423318|ref|ZP_06254231.1| ribosomal protein S2 [Prevotella oris F0302] gi|281402654|gb|EFB33485.1| ribosomal protein S2 [Prevotella oris F0302] Length = 290 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A +V+ G +I Sbjct: 26 QLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEVLKAIAKSGKKI 85 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V + A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 86 LFVATKKQAKDIVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 145 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L + R+R KL++ L I D+ LP +FV+D +E +A++EA RL IP+ +V Sbjct: 146 NLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEANRLGIPVFGIV 205 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +D+VIP NDD+ S+ V SA +G+ Sbjct: 206 DTNSDPKNIDFVIPANDDAKDSVETILTAVCSAIAEGL 243 >gi|332296170|ref|YP_004438093.1| ribosomal protein S2 [Thermodesulfobium narugense DSM 14796] gi|332179273|gb|AEE14962.1| ribosomal protein S2 [Thermodesulfobium narugense DSM 14796] Length = 247 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 96/242 (39%), Positives = 151/242 (62%), Gaps = 7/242 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +T+ + A + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKPYIFTARNGIYIIDLQKTLRCFEVAYDFARKIASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA D + E A R VN++WLGG +TN+ T++ I +L++LEEL Sbjct: 64 GEEILFVGTKRQAQDAIKEEAIRCGSPYVNTRWLGGTLTNFVTITSRIARLKELEEL--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ G + KE + ++++ KL+ +L G+++M LP +FV D ++++A+ EAR+L Sbjct: 121 QSSGRIDLYPIKEAMKLKKELAKLQSSLGGMKNMNRLPGALFVADIKKDQIAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +PDLVD +IP NDD+ R+I L +A A I+ Q + +++K Sbjct: 181 IPVIGIVDTNCDPDLVDCIIPANDDAIRAIKLIAGKIADAIIEAKQGQDAIEISESKEFQ 240 Query: 242 ET 243 E+ Sbjct: 241 ES 242 >gi|237734605|ref|ZP_04565086.1| 30S ribosomal protein S2 [Mollicutes bacterium D7] gi|229382425|gb|EEO32516.1| 30S ribosomal protein S2 [Coprobacillus sp. D7] Length = 282 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 143/218 (65%), Gaps = 7/218 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + A + +++ A+GG Sbjct: 1 MKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLQKSSKKIDDAYKAMNEIAAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA + V E A RS + VNS+WLGG +TN+KT+ + I++L +LE++ E Sbjct: 61 KVLFVGTKKQAQEAVKEEAIRSESFYVNSRWLGGTLTNFKTIQKRIRRLIELEKM---EA 117 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KKE + ++++ KL++ L GI++M LP+ +FVVD E A+ EA+ L IP Sbjct: 118 DGTFDLLPKKEVILLKKEAAKLEKNLGGIKEMRRLPNALFVVDPKAEHNAVAEAKILGIP 177 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + +VDTN +PD VDYVIP NDD+ R++ L +A A Sbjct: 178 VFGIVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADA 215 >gi|331703590|ref|YP_004400277.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256383776|gb|ACU78346.1| ribosomal protein S2 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384606|gb|ACU79175.1| ribosomal protein S2 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455831|gb|ADH22066.1| ribosomal protein S2 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802145|emb|CBW54299.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 292 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 92/225 (40%), Positives = 148/225 (65%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLETLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEE--- 120 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E +G TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L Sbjct: 121 EEKKGRLSLRTKKEQIKILKEKAKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A+ DTN++PD++DYVIPGNDD S+ L +++ A +G Sbjct: 181 NIPVIAICDTNADPDMIDYVIPGNDDLQESVNLIINILVEAYAEG 225 >gi|332519127|ref|ZP_08395594.1| ribosomal protein S2 [Lacinutrix algicola 5H-3-7-4] gi|332044975|gb|EGI81168.1| ribosomal protein S2 [Lacinutrix algicola 5H-3-7-4] Length = 257 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 142/222 (63%), Gaps = 5/222 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH W+P M Y++ ERN HII+L +T + +A + ++ A G Sbjct: 5 VKELLEAGVHFGHLTRKWDPNMAPYVYMERNGIHIINLYKTAAKIDEAGEALAKIAASGR 64 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA D V E A + +W GGM+TN+ T+ ++I+K+ ++ + K++ Sbjct: 65 KILFVATKKQAKDIVAEKAGSINMPYITERWPGGMLTNFVTIRKAIKKMATIDRM--KKD 122 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +KKERL ++R R KL++ L I DM LP +FVVD RE +AI+EA++L IPI Sbjct: 123 GTFLTLSKKERLQVDRLRAKLEKNLGSIVDMTRLPGALFVVDIKREHIAIKEAQKLNIPI 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P VDYVIP NDD+S+SI V A G+ Sbjct: 183 FAMVDTNSDPRQVDYVIPANDDASKSIDKILTHVTEAITGGL 224 >gi|171910277|ref|ZP_02925747.1| ribosomal protein S2 [Verrucomicrobium spinosum DSM 4136] Length = 249 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 94/203 (46%), Positives = 135/203 (66%), Gaps = 1/203 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +L+E+GV FGH+ WNPKM+ ++ RN HII++ +T+ + A ++D +G RI Sbjct: 27 ELVEAGVHFGHQTRRWNPKMKGFLLEARNGIHIINIEKTLEQAEVAANFLADLTRKGKRI 86 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQ 128 LFV K QA + V EAA Q+ VN +WLGG +TN T+ +S+ + + LE+L E + Sbjct: 87 LFVGCKRQAQEAVQEAATAVGQFYVNHRWLGGTLTNQATIRKSVARWQYLEDLPKLPEFK 146 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +KKE + R++ KL+R L GIR M GLPD M +VD+ RE +A+ EA RLRIPIVA+V Sbjct: 147 AMSKKEIAALNREKAKLERNLKGIRYMDGLPDAMVIVDSAREHIAVHEATRLRIPIVALV 206 Query: 189 DTNSNPDLVDYVIPGNDDSSRSI 211 D+N++P+ VDY I NDD+ RSI Sbjct: 207 DSNADPNAVDYPIAANDDAIRSI 229 >gi|198277522|ref|ZP_03210053.1| hypothetical protein BACPLE_03744 [Bacteroides plebeius DSM 17135] gi|198270020|gb|EDY94290.1| hypothetical protein BACPLE_03744 [Bacteroides plebeius DSM 17135] Length = 279 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 145/233 (62%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV +++A + + G +IL Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKVEEAAEALKQIAKSGKKIL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ A+VD Sbjct: 129 LSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKENIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPSNIDFVIPANDDATKSVEVILDACCAAMAEGLEERKAE-KVDMEAAGE 240 >gi|218438143|ref|YP_002376472.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 7424] gi|218170871|gb|ACK69604.1| ribosomal protein S2 [Cyanothece sp. PCC 7424] Length = 269 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 105/259 (40%), Positives = 152/259 (58%), Gaps = 12/259 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +LLESGV FGH+ WNPKM YI+ RN HIIDL QT ++++A + +G Sbjct: 5 SLNELLESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAELMEEAYDYMRKASDQG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + LFV TK QA+ + + A R VN +WLGGM+TNW+T+ ++L++LEE+ E Sbjct: 65 KKFLFVGTKRQAAGIIAQEALRCGSNYVNQRWLGGMLTNWETIRTRAERLKELEEM---E 121 Query: 127 NQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ KL++ L GI+ M +PD++ ++D RE A+QE ++L I Sbjct: 122 ESGALARRPKKEAAVLRREMYKLQKYLGGIKTMRRIPDVVIIIDLKREYNAVQECQKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PIVA++DTN +PD VD IP NDD+ RSI L +A A +G +H + +D E Sbjct: 182 PIVALLDTNCDPDYVDVPIPANDDAIRSIKLIIGKLADAIYEG---RHGEVASDEDY--E 236 Query: 243 TVVHSKEGMQLEEDSQSSE 261 S E EED Q + Sbjct: 237 EFDESLEEDDYEEDYQQQD 255 >gi|78197212|gb|ABB34977.1| ribosomal protein S2 [Synechococcus sp. CC9605] Length = 256 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 149/243 (61%), Gaps = 9/243 (3%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + Sbjct: 18 AMAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRS 77 Query: 62 TVARGGRILFVATKSQASDCV-MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 G R LFV TK QAS+ V +EAA+ A Y VN +WLGGM+TNW T+ I +L+DLE Sbjct: 78 AARSGKRFLFVGTKKQASEVVALEAARCGASY-VNQRWLGGMLTNWTTMKARIDRLKDLE 136 Query: 121 ELLNKENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 + E+ G KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ E Sbjct: 137 RM---ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRESNAVLE 193 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 AR+L IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 194 ARKLDIPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRHGSNDQRGGD 253 Query: 237 TKS 239 ++ Sbjct: 254 SEG 256 >gi|189095356|ref|YP_001936369.1| ribosomal protein S2 [Heterosigma akashiwo] gi|157694699|gb|ABV65975.1| 30S ribosomal protein S2 [Heterosigma akashiwo] gi|157777930|gb|ABV70116.1| 30S ribosomal protein S2 [Heterosigma akashiwo] Length = 234 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 98/221 (44%), Positives = 149/221 (67%), Gaps = 7/221 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV +GH+++ WNPKM YI+ ER+ HIIDL QT+ +L++A +++ Sbjct: 1 MANLSLAQLLEAGVHYGHKSYRWNPKMFPYIYNERDGIHIIDLVQTIHLLKQACDFVNEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G LFV TK QA+ + + AKR+ Y VN +WLGGM+TN T S IQ+L+ LE Sbjct: 61 ASEGKTFLFVGTKRQAAAIIAQEAKRANSYYVNHRWLGGMLTNSNTFSTRIQRLKFLE-- 118 Query: 123 LNKENQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++E G+ TKKE ++++ +KL++ L G+++M PD++ VVD RE AI+EA Sbjct: 119 -SQEASGYFEKLTKKESALLKKELEKLRKYLSGVKEMIKRPDIIIVVDQKREMNAIKEAL 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +L+IPI++++DTN +PDLVD IPGNDD+ RSI +A Sbjct: 178 KLKIPIISILDTNCDPDLVDIPIPGNDDALRSIKFIIQKLA 218 >gi|116074686|ref|ZP_01471947.1| 30S ribosomal protein S2 [Synechococcus sp. RS9916] gi|116067908|gb|EAU73661.1| 30S ribosomal protein S2 [Synechococcus sp. RS9916] Length = 239 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 9/235 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCV-MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 R LFV TK QAS+ V +EAA+ Y VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 65 KRFLFVGTKKQASEVVALEAARCGGSY-VNQRWLGGMLTNWTTMKARIDRLKDLERM--- 120 Query: 126 ENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGSNDQRGGD 235 >gi|148239665|ref|YP_001225052.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7803] gi|166226764|sp|A5GLE0|RS2_SYNPW RecName: Full=30S ribosomal protein S2 gi|147848204|emb|CAK23755.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7803] Length = 239 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 141/234 (60%), Gaps = 7/234 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVAQEALRCGGSYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L I Sbjct: 122 ASGAIAMRPKKEGAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 P+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 182 PLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGSNEQRGGD 235 >gi|288800290|ref|ZP_06405748.1| ribosomal protein S2 [Prevotella sp. oral taxon 299 str. F0039] gi|288332503|gb|EFC70983.1| ribosomal protein S2 [Prevotella sp. oral taxon 299 str. F0039] Length = 273 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 96/218 (44%), Positives = 138/218 (63%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + G +I Sbjct: 8 QLLQAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAADALKQIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA + V E A V +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKEIVAEKASSVNMPYVVERWPGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FV+D +E +AI+EA+RL IP+ A+V Sbjct: 128 NLSKRELLQITRQRAKLEKNLGSISDLTRLPSALFVIDVMKEHIAIKEAQRLGIPVFAIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P LVDYVIP NDD+ SI + SA +G+ Sbjct: 188 DTNSDPRLVDYVIPANDDAKDSIDVILTACCSAIAEGL 225 >gi|284044970|ref|YP_003395310.1| ribosomal protein S2 [Conexibacter woesei DSM 14684] gi|283949191|gb|ADB51935.1| ribosomal protein S2 [Conexibacter woesei DSM 14684] Length = 420 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 95/210 (45%), Positives = 136/210 (64%), Gaps = 7/210 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q +++LLE+GV FGH+ WNPKM R+I ER +IIDL +T +L +A + S Sbjct: 7 QAGLKELLENGVHFGHQTRRWNPKMRRFIHGERAGIYIIDLLKTQELLTEAQEFASAVAH 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG +LFV TK QA D + E A+ + VN +WLGG++TN+ T++ I++L DLE Sbjct: 67 RGGTVLFVGTKKQARDGIKEVAEAAGMPYVNHRWLGGLLTNFGTITNRIRRLHDLERY-- 124 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G +ERL KL+ L G+++M +PD MFV+D E +A++EARRL Sbjct: 125 -EREGQLDLLPTRERLAARADLLKLQANLGGVKNMARIPDAMFVIDLKVEAIAVKEARRL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 RIPI+ +VDTN +PD VD+VIPGNDD+ ++ Sbjct: 184 RIPIIGLVDTNCDPDEVDFVIPGNDDAMKA 213 >gi|260591818|ref|ZP_05857276.1| ribosomal protein S2 [Prevotella veroralis F0319] gi|260536102|gb|EEX18719.1| ribosomal protein S2 [Prevotella veroralis F0319] Length = 270 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 2/234 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G +I Sbjct: 8 QLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEASEALKGIARSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V E A VN +W GGM+TN+ T+ ++++K+ ++++L+ Sbjct: 68 LFVATKKQAKDVVAEKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMKDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 DTNS+P +DYVIP NDD+ S+ + A +G+ + + AD K+ E Sbjct: 188 DTNSDPKNIDYVIPANDDAKDSVEVILGACCEAIAEGLTERKAEK-ADEKANAE 240 >gi|159026538|emb|CAO86470.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 265 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 146/224 (65%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM +YI+ RN HIIDL QT ++++A + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLIEEAYEFVRGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LF+ TK QA+ + + A RS + VN +WLGGM+TNW+T+ +++L++LEEL Sbjct: 61 ADSGKRFLFIGTKRQAAAIIKQEALRSGSHFVNQRWLGGMLTNWETIRGRVERLKELEEL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI+ M LPDL+ VVD RE AIQE ++L Sbjct: 121 ENSGALDKRPKKEASVLRRELGKLEKYLGGIKTMRRLPDLVIVVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI++++DTN +PDLVD IP NDD+ RS+ L ++ A I+G Sbjct: 181 IPIISLLDTNCDPDLVDVPIPANDDAIRSVKLILGKISDAIIEG 224 >gi|300854488|ref|YP_003779472.1| 30S ribosomal protein S2 [Clostridium ljungdahlii DSM 13528] gi|300434603|gb|ADK14370.1| 30S ribosomal protein S2 [Clostridium ljungdahlii DSM 13528] Length = 235 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 142/222 (63%), Gaps = 2/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFIREIASE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI-QKLRDLEELLN 124 G ILF+ TK QA + + E AKRS + VN++WLGGM+TN+ T+ I + + + Sbjct: 64 GKDILFIGTKKQAQEAIKEEAKRSNMHYVNNRWLGGMLTNFATIKTRIAKLEELEKMEED 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRLRIP 183 + KKE + + +++KL++ L GI+ M +F+VD +EK AI EA+ L IP Sbjct: 124 GTFEVLPKKEVIKLNNEKEKLEKNLGGIKTMNAENVGALFIVDPRKEKNAISEAKILGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VA+VDTN +PD +DYVIPGNDD+ R++ L VA A ++G Sbjct: 184 VVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKVADAVMEG 225 >gi|81301339|ref|YP_401547.1| 30S ribosomal protein S2 [Synechococcus elongatus PCC 7942] gi|123728119|sp|Q31K59|RS2_SYNE7 RecName: Full=30S ribosomal protein S2 gi|81170220|gb|ABB58560.1| SSU ribosomal protein S2P [Synechococcus elongatus PCC 7942] Length = 251 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 95/239 (39%), Positives = 145/239 (60%), Gaps = 13/239 (5%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +++ESGV FGH+ WNP+M YI+ RN HIIDL +T ++ A + + + Sbjct: 4 ISLAEMMESGVHFGHQTRRWNPRMAPYIYTARNGVHIIDLVKTAQCVETAYRWVRTNAEQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G R LFV TK QA+ + E A R Y +N +WLGGM+TNW T+ + +L++LE + Sbjct: 64 GKRFLFVGTKRQAAGIIAEEATRCGSYYINQRWLGGMLTNWATIKGRVDRLKELERM--- 120 Query: 126 ENQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE + R+ ++L++ L GI++M LPD + ++D RE A+QE ++L Sbjct: 121 EETGALALRPKKEAAVLRRELERLQKYLGGIKNMRRLPDAVVIIDQKREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG------IARQHSYMG 234 IPIVA++DTN +PD+VD IPGNDD+ RS+ L +A A + +A ++ Y G Sbjct: 181 IPIVAMLDTNCDPDVVDVPIPGNDDAIRSVKLIVSKLADAIYEARHGAAPVAEEYDYDG 239 >gi|223931093|ref|YP_002586955.1| ribosomal protein S2 [Syntrichia ruralis] gi|219562307|gb|ACL27638.1| ribosomal protein S2 [Syntrichia ruralis] Length = 236 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 141/222 (63%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH+ WNPKM YIF ER HI++L+QT L +A +++D+ ++G Sbjct: 10 LEEMMEAGVHFGHQARKWNPKMASYIFTERKGIHILNLTQTARFLSEACDLVADSASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK QA+D V A+ ++ + VN KWLGGM+TNW T+ Q +QK ++LE NKE Sbjct: 70 QFLIVGTKYQAADLVASASIKARCHYVNQKWLGGMLTNWATIEQRLQKFKELE---NKEK 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KKE N++R+ +L++ L+GI+ M LPD++ ++D +E AIQE L IP Sbjct: 127 AGTFNQLPKKEAANLKRQLAQLRKYLEGIKYMTSLPDIVIIIDQQKEITAIQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDT+ +PDL D IP NDD+ SI + + A +G Sbjct: 187 TICLVDTDCDPDLTDIPIPANDDARASIRWILNKLTLAISEG 228 >gi|255507287|ref|ZP_05382926.1| 30S ribosomal protein S2 [Chlamydia trachomatis D(s)2923] gi|76443858|gb|ABA42633.1| S2 ribosomal protein [Chlamydia trachomatis] gi|82393651|gb|ABB72121.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 100/268 (37%), Positives = 154/268 (57%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + E A ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREVAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|83319465|ref|YP_424355.1| 30S ribosomal protein S2 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123740053|sp|Q2SSA8|RS2_MYCCT RecName: Full=30S ribosomal protein S2 gi|83283351|gb|ABC01283.1| 30S ribosomal protein S2 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 291 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 93/225 (41%), Positives = 148/225 (65%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNAAQKLLEFLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEE--- 120 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E +G TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L Sbjct: 121 EEKKGRLSLRTKKEQIKILKEKAKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A+ DTN++PD+VDYVIPGNDD S+ L +++ A +G Sbjct: 181 NIPVIAICDTNADPDMVDYVIPGNDDLQESVNLIINILVEAYAEG 225 >gi|303236832|ref|ZP_07323411.1| ribosomal protein S2 [Prevotella disiens FB035-09AN] gi|302483000|gb|EFL46016.1| ribosomal protein S2 [Prevotella disiens FB035-09AN] Length = 267 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 138/218 (63%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH + WNP M+ YI+ ERN HIIDL +TV + +A +V+ G +I Sbjct: 8 QLLQAGCHFGHLHRKWNPAMKPYIYMERNGIHIIDLHKTVAKIDEAAEVLKGIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK Q+ D V E A VN +W GGM+TN+ T+ ++I+K+ +++ L+N Sbjct: 68 LFVATKKQSKDVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAIKKMTNIDRLMNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL IP+ +V Sbjct: 128 NLSKREILQISRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +DYVIP NDD+ S+ + +A +G+ Sbjct: 188 DTNSDPKNIDYVIPANDDAKDSVEVILGACCAAIAEGL 225 >gi|150010070|ref|YP_001304813.1| 30S ribosomal protein S2 [Parabacteroides distasonis ATCC 8503] gi|262382628|ref|ZP_06075765.1| 30S ribosomal protein S2 [Bacteroides sp. 2_1_33B] gi|298374430|ref|ZP_06984388.1| ribosomal protein S2 [Bacteroides sp. 3_1_19] gi|301308102|ref|ZP_07214056.1| ribosomal protein S2 [Bacteroides sp. 20_3] gi|166225291|sp|A6LHM7|RS2_PARD8 RecName: Full=30S ribosomal protein S2 gi|149938494|gb|ABR45191.1| ribosomal protein S2 [Parabacteroides distasonis ATCC 8503] gi|262295506|gb|EEY83437.1| 30S ribosomal protein S2 [Bacteroides sp. 2_1_33B] gi|298268798|gb|EFI10453.1| ribosomal protein S2 [Bacteroides sp. 3_1_19] gi|300833572|gb|EFK64188.1| ribosomal protein S2 [Bacteroides sp. 20_3] Length = 278 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 139/218 (63%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+GV FGH WNP M YIF ERN HIIDL +TV + +A +V+ + +G ++ Sbjct: 8 QLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKNLAKQGKKV 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA V + A V +W GGM+TN+ T+ ++I+K+ ++++ Sbjct: 68 LFVATKKQAKQVVADKAASVGMPYVIERWPGGMLTNFPTIRKAIKKMATIDKMTKDGTFD 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E+L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKREKLQITRQRAKLEKTLGSIVDLTRLPSALFVVDVMKEHIAVREANRLGIPVFGMV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNSNP+ +DYVIP NDD+++S+ + + A +G+ Sbjct: 188 DTNSNPNNIDYVIPANDDATKSVEVILGAICEAMNEGL 225 >gi|313665269|ref|YP_004047140.1| ribosomal protein S2 [Mycoplasma leachii PG50] gi|312949782|gb|ADR24378.1| ribosomal protein S2 [Mycoplasma leachii PG50] Length = 291 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 93/225 (41%), Positives = 148/225 (65%), Gaps = 7/225 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLEFLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEE--- 120 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E +G TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L Sbjct: 121 EEKKGRLSLRTKKEQIKILKEKAKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A+ DTN++PD+VDYVIPGNDD S+ L +++ A +G Sbjct: 181 NIPVIAICDTNADPDMVDYVIPGNDDLQESVNLIINILVEAYAEG 225 >gi|15895063|ref|NP_348412.1| 30S ribosomal protein S2 [Clostridium acetobutylicum ATCC 824] gi|25009216|sp|Q97I66|RS2_CLOAB RecName: Full=30S ribosomal protein S2 gi|15024759|gb|AAK79752.1|AE007688_1 Ribosomal protein S2 [Clostridium acetobutylicum ATCC 824] gi|325509201|gb|ADZ20837.1| 30S ribosomal protein S2 [Clostridium acetobutylicum EA 2018] Length = 233 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/228 (45%), Positives = 145/228 (63%), Gaps = 14/228 (6%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + + Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIDEAYNFIREVSEQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E + R+ + VN++WLGGM+TN+ T+ I KL L+++ + Sbjct: 64 GKDILFVGTKKQAQEAIAEESVRAGMHFVNNRWLGGMLTNFNTIKTRIAKLNGLKKM--E 121 Query: 126 ENQGF---TKKERLNIERKRDKLKRALDGIRDM-----GGLPDLMFVVDTNREKLAIQEA 177 E+ F KKE + + + +KL + L GI +M G L FVVD +EK AI EA Sbjct: 122 EDGTFDVLPKKEVIILRNEEEKLVKNLGGIVNMTQSNIGAL----FVVDPRKEKNAISEA 177 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + L IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G Sbjct: 178 KILGIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVRLITSKIADAIIEG 225 >gi|258647967|ref|ZP_05735436.1| ribosomal protein S2 [Prevotella tannerae ATCC 51259] gi|260851807|gb|EEX71676.1| ribosomal protein S2 [Prevotella tannerae ATCC 51259] Length = 278 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 137/221 (61%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G Sbjct: 5 TFDQLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKQIAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 RILFV+TK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++L + Sbjct: 65 KRILFVSTKKQAKDIVAEKAAAVNMPYVTERWPGGMLTNFPTIRKAVKKMANIDKLTADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +K+E L I R+R KL++ I D+ LP +F+VD +E +A++EA RL IP+ Sbjct: 125 TFSNLSKREILQISRQRAKLEKNFGSIADLTRLPAALFIVDVMKEHIAVKEAHRLDIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +VDTNS+P+ VD+VIP NDD+ +SI + D +A +G+ Sbjct: 185 GIVDTNSDPNSVDHVIPANDDAKQSIEVILDACCAAIAEGL 225 >gi|56751589|ref|YP_172290.1| 30S ribosomal protein S2 [Synechococcus elongatus PCC 6301] gi|61215369|sp|Q5N1Q0|RS2_SYNP6 RecName: Full=30S ribosomal protein S2 gi|56686548|dbj|BAD79770.1| 30S ribosomal protein S2 [Synechococcus elongatus PCC 6301] Length = 251 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 93/236 (39%), Positives = 143/236 (60%), Gaps = 7/236 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +++ESGV FGH+ WNP+M YI+ RN HIIDL +T ++ A + + + Sbjct: 4 ISLAEMMESGVHFGHQTRRWNPRMAPYIYTARNGVHIIDLVKTAQCVETAYRWVRTNAEQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G R LFV TK QA+ + E A R Y +N +WLGGM+TNW T+ + +L++LE + Sbjct: 64 GKRFLFVGTKRQAAGIIAEEATRCGSYYINQRWLGGMLTNWATIKGRVDRLKELERMGET 123 Query: 126 ENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + R+ ++L++ L GI++M LPD + ++D RE A+QE ++L IPI Sbjct: 124 GALALRPKKEAAVLRRELERLQKYLGGIKNMRRLPDAVVIIDQKREYNAVQECQKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG------IARQHSYMG 234 VA++DTN +PD+VD IPGNDD+ RS+ L +A A + +A ++ Y G Sbjct: 184 VAMLDTNCDPDVVDVPIPGNDDAIRSVKLIVSKLADAIYEARHGAAPVAEEYDYDG 239 >gi|256838880|ref|ZP_05544390.1| ribosomal protein S2 [Parabacteroides sp. D13] gi|256739799|gb|EEU53123.1| ribosomal protein S2 [Parabacteroides sp. D13] Length = 292 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 139/218 (63%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+GV FGH WNP M YIF ERN HIIDL +TV + +A +V+ + +G ++ Sbjct: 22 QLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKNLAKQGKKV 81 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA V + A V +W GGM+TN+ T+ ++I+K+ ++++ Sbjct: 82 LFVATKKQAKQVVADKAASVGMPYVIERWPGGMLTNFPTIRKAIKKMATIDKMTKDGTFD 141 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E+L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 142 NLSKREKLQITRQRAKLEKTLGSIVDLTRLPSALFVVDVMKEHIAVREANRLGIPVFGMV 201 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNSNP+ +DYVIP NDD+++S+ + + A +G+ Sbjct: 202 DTNSNPNNIDYVIPANDDATKSVEVILGAICEAMNEGL 239 >gi|161353762|ref|YP_381532.2| 30S ribosomal protein S2 [Synechococcus sp. CC9605] gi|260435058|ref|ZP_05789028.1| ribosomal protein S2 [Synechococcus sp. WH 8109] gi|209573683|sp|Q3AKA5|RS2_SYNSC RecName: Full=30S ribosomal protein S2 gi|260412932|gb|EEX06228.1| ribosomal protein S2 [Synechococcus sp. WH 8109] Length = 238 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 147/238 (61%), Gaps = 9/238 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRSAARSG 64 Query: 67 GRILFVATKSQASDCV-MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 R LFV TK QAS+ V +EAA+ A Y VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 65 KRFLFVGTKKQASEVVALEAARCGASY-VNQRWLGGMLTNWTTMKARIDRLKDLERM--- 120 Query: 126 ENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D++ Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRHGSNDQRGGDSEG 238 >gi|237719097|ref|ZP_04549578.1| 30S ribosomal protein S2 [Bacteroides sp. 2_2_4] gi|260171975|ref|ZP_05758387.1| 30S ribosomal protein S2 [Bacteroides sp. D2] gi|299148179|ref|ZP_07041241.1| ribosomal protein S2 [Bacteroides sp. 3_1_23] gi|315920286|ref|ZP_07916526.1| 30S ribosomal protein S2 [Bacteroides sp. D2] gi|229451476|gb|EEO57267.1| 30S ribosomal protein S2 [Bacteroides sp. 2_2_4] gi|298512940|gb|EFI36827.1| ribosomal protein S2 [Bacteroides sp. 3_1_23] gi|313694161|gb|EFS30996.1| 30S ribosomal protein S2 [Bacteroides sp. D2] Length = 278 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 143/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++SI + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPSNVDFVIPANDDATKSIEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|330996046|ref|ZP_08319940.1| ribosomal protein S2 [Paraprevotella xylaniphila YIT 11841] gi|329574043|gb|EGG55621.1| ribosomal protein S2 [Paraprevotella xylaniphila YIT 11841] Length = 272 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 96/234 (41%), Positives = 145/234 (61%), Gaps = 2/234 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + A + + G +IL Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDDAAEALKQIAKSGKKIL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ ++++L + Sbjct: 69 FVATKKQAKQVVAEKAAAVNMPYVIERWPGGMLTNFPTIRKAVKKMANIDKLTADGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FVVD +E++A++EA RL IP+ A+VD Sbjct: 129 LSKREILQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKEQIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 TNSNPD +D+VIP NDD+++S+ + + +A +G+ + + D ++AGE Sbjct: 189 TNSNPDNIDFVIPANDDANKSVEVILEACCAAIAEGLEERKAE-KVDAEAAGEA 241 >gi|262341005|ref|YP_003283860.1| 30S ribosomal protein S2 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272342|gb|ACY40250.1| 30S ribosomal protein S2 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 239 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 95/219 (43%), Positives = 143/219 (65%), Gaps = 5/219 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LL++GV FGH WNP M +IF ++ HIIDLS+T+ L++A + G +IL Sbjct: 8 LLKAGVHFGHIARKWNPNMRPFIFMKKGGIHIIDLSKTIFKLEQACDGLKKIAITGKKIL 67 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V TK+QA + V AK CV +WLGG++TN+ T+ +S++K+ ++E++ K+N F Sbjct: 68 LVGTKAQAKEKVFFYAKSINMPCVTERWLGGLLTNFTTIRKSVKKMNNIEKM--KKNGTF 125 Query: 131 ---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +KKERL + R +KL + L I +M +P +F+VD N+EK+A+ EA++L+IPI A+ Sbjct: 126 NTLSKKERLLVNRLYEKLHKNLGSISNMNHIPGGIFLVDPNKEKIALTEAKKLKIPIFAM 185 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VDTN+NP+ + Y IP NDDSS+SI + VA + DGI Sbjct: 186 VDTNTNPNEIQYPIPSNDDSSKSIDIILKFVAESIQDGI 224 >gi|254443028|ref|ZP_05056504.1| ribosomal protein S2 [Verrucomicrobiae bacterium DG1235] gi|198257336|gb|EDY81644.1| ribosomal protein S2 [Verrucomicrobiae bacterium DG1235] Length = 316 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 141/228 (61%), Gaps = 9/228 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LL++GV FGH+ WNPK + ++F R +IDL++T L+KA + D VA+GG +L Sbjct: 8 LLDAGVHFGHQVKRWNPKSKGFVFDHRQGISVIDLAKTYEGLKKAYDFVEDVVAKGGEVL 67 Query: 71 FVATKSQASDCVME-AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 V TK QA + + E AA +CVN +W+GG +TNW T++ SI K + + + E+ G Sbjct: 68 LVGTKRQAQEIIRETAANTGMPFCVN-RWMGGTLTNWTTITSSITKYK---KYMAMESDG 123 Query: 130 ----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 KKE I R+ ++ R +GI M LP MFVVD N E +A+ EARR+++P+ Sbjct: 124 SLAKLPKKEGSAIRREMSRMHRNFEGIVKMDKLPAAMFVVDVNYEDIAVAEARRVKVPVA 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 A+VDTNS+P VDY IPGNDD+ +SI + + +A A G A++ + M Sbjct: 184 AIVDTNSDPSTVDYAIPGNDDAVKSIRIILEAIAEAVESGRAKRSARM 231 >gi|332878073|ref|ZP_08445803.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684035|gb|EGJ56902.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 272 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 96/234 (41%), Positives = 145/234 (61%), Gaps = 2/234 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + A + + G +IL Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDDAAEALKQIAKSGKKIL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ ++++L + Sbjct: 69 FVATKKQAKQVVAEKAAAVNMPYVIERWPGGMLTNFPTIRKAVKKMANIDKLTADGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FVVD +E++A++EA RL IP+ A+VD Sbjct: 129 LSKREILQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKEQIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 TNSNPD +D+VIP NDD+++S+ + + +A +G+ + + D ++AGE Sbjct: 189 TNSNPDNIDFVIPANDDANKSVEVILEACCAAIAEGLEERKAE-KVDVEAAGEA 241 >gi|302344890|ref|YP_003813243.1| ribosomal protein S2 [Prevotella melaninogenica ATCC 25845] gi|302149276|gb|ADK95538.1| ribosomal protein S2 [Prevotella melaninogenica ATCC 25845] Length = 271 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 134/218 (61%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G +I Sbjct: 8 QLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKEVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +DYVIP NDD+ S+ A +G+ Sbjct: 188 DTNSDPKNIDYVIPANDDAKDSVEAILAACCGAIAEGL 225 >gi|88808497|ref|ZP_01124007.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7805] gi|88787485|gb|EAR18642.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7805] Length = 239 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 140/234 (59%), Gaps = 7/234 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVALEATRCGGSYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L I Sbjct: 122 ASGAIAMRPKKEGAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 P+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 182 PLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGSNEQRGGD 235 >gi|254432784|ref|ZP_05046487.1| ribosomal protein S2 [Cyanobium sp. PCC 7001] gi|197627237|gb|EDY39796.1| ribosomal protein S2 [Cyanobium sp. PCC 7001] Length = 229 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 136/219 (62%), Gaps = 7/219 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G R L Sbjct: 1 MMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSGKRFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 FV TK QAS+ + A R VN +WLGGM+TNW T+ I++L+DLE + E+ G Sbjct: 61 FVGTKKQASEVIALEATRCGAAYVNQRWLGGMLTNWTTMRARIERLKDLERM---ESSGA 117 Query: 131 T----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L IP+V+ Sbjct: 118 IAMRPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLDIPLVS 177 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ RS+ L +A A +G Sbjct: 178 MLDTNCDPDLCDVPIPCNDDAVRSVQLVLGRLADAINEG 216 >gi|160883131|ref|ZP_02064134.1| hypothetical protein BACOVA_01100 [Bacteroides ovatus ATCC 8483] gi|237714352|ref|ZP_04544833.1| 30S ribosomal protein S2 [Bacteroides sp. D1] gi|262408184|ref|ZP_06084731.1| ribosomal protein S2 [Bacteroides sp. 2_1_22] gi|293369531|ref|ZP_06616110.1| ribosomal protein S2 [Bacteroides ovatus SD CMC 3f] gi|294645476|ref|ZP_06723177.1| ribosomal protein S2 [Bacteroides ovatus SD CC 2a] gi|294806741|ref|ZP_06765568.1| ribosomal protein S2 [Bacteroides xylanisolvens SD CC 1b] gi|298480204|ref|ZP_06998402.1| ribosomal protein S2 [Bacteroides sp. D22] gi|156111356|gb|EDO13101.1| hypothetical protein BACOVA_01100 [Bacteroides ovatus ATCC 8483] gi|229445516|gb|EEO51307.1| 30S ribosomal protein S2 [Bacteroides sp. D1] gi|262353736|gb|EEZ02829.1| ribosomal protein S2 [Bacteroides sp. 2_1_22] gi|292635416|gb|EFF53929.1| ribosomal protein S2 [Bacteroides ovatus SD CMC 3f] gi|292639177|gb|EFF57494.1| ribosomal protein S2 [Bacteroides ovatus SD CC 2a] gi|294446023|gb|EFG14663.1| ribosomal protein S2 [Bacteroides xylanisolvens SD CC 1b] gi|298273485|gb|EFI15048.1| ribosomal protein S2 [Bacteroides sp. D22] Length = 278 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 95/233 (40%), Positives = 143/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPSNVDFVIPANDDATKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|171777594|ref|ZP_02919282.1| hypothetical protein STRINF_00117 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283203|gb|EDT48627.1| hypothetical protein STRINF_00117 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 228 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 147/228 (64%), Gaps = 12/228 (5%) Query: 31 RYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSA 90 +YIF ERN H+IDL QTV M A + + D A ILFV TK QA+D V E A+R+ Sbjct: 2 KYIFTERNGIHVIDLQQTVKMADTAYEFVRDAAANDAVILFVGTKKQAADAVKEEAERAG 61 Query: 91 QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKLKR 147 QY +N +WLGG +TNW T+ + I +L++++ + +E+ F KKE + ++R +L++ Sbjct: 62 QYYINHRWLGGTLTNWDTIQKRIARLKEIKRM--EEDGTFEVLPKKEVALLNKQRARLEK 119 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L GI DM +PD+M++VD ++E++AI+EA++L IP+VA+VDTN++PD +D +IP NDD+ Sbjct: 120 FLGGIEDMPRIPDVMYIVDPHKEQIAIKEAKKLGIPVVAMVDTNADPDDIDVIIPANDDA 179 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAG-----ETVVHSKEG 250 R++ L +A A I+G RQ AD ++ E +V EG Sbjct: 180 IRAVKLITSKLADAVIEG--RQGEAADADFQAEAKADSIEEIVEVVEG 225 >gi|325299010|ref|YP_004258927.1| ribosomal protein S2 [Bacteroides salanitronis DSM 18170] gi|324318563|gb|ADY36454.1| ribosomal protein S2 [Bacteroides salanitronis DSM 18170] Length = 279 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 144/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQIVAEKATSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYAN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ A+VD Sbjct: 129 LSKREILQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKENIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPTNVDFVIPANDDATKSVEVILDACCAAMAEGLEERKAE-KVDMEAAGE 240 >gi|299142497|ref|ZP_07035628.1| ribosomal protein S2 [Prevotella oris C735] gi|298575932|gb|EFI47807.1| ribosomal protein S2 [Prevotella oris C735] Length = 290 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 137/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + G +I Sbjct: 26 QLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKAIAKSGKKI 85 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V + A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 86 LFVATKKQAKDIVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 145 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L + R+R KL++ L I D+ LP +FV+D +E +A++EA RL IP+ +V Sbjct: 146 NLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEANRLGIPVFGIV 205 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +D+VIP NDD+ S+ V SA +G+ Sbjct: 206 DTNSDPKNIDFVIPANDDAKDSVETILTAVCSAIAEGL 243 >gi|89898766|ref|YP_515876.1| 30S ribosomal protein S2 [Chlamydophila felis Fe/C-56] gi|123749519|sp|Q252Q7|RS2_CHLFF RecName: Full=30S ribosomal protein S2 gi|89332138|dbj|BAE81731.1| 30S ribosomal protein S2 [Chlamydophila felis Fe/C-56] Length = 273 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 100/264 (37%), Positives = 158/264 (59%), Gaps = 4/264 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+KAL + Sbjct: 4 SLCNLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRKALPQVCK 63 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 64 VIKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEK 123 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + + TKKE + ++ KL + L+GIR + P L+ VVD EK+A+ EA++L Sbjct: 124 DLTQNSSYLTKKEIALLAKRHQKLLKNLEGIRYLRKTPGLVIVVDPGYEKIAVAEAKKLG 183 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +P +D+VIP NDDS +SI L+ SA D I +G + S Sbjct: 184 IPVLALVDTNCDPTPIDHVIPCNDDSLKSIR----LIISAIKDAIVNTKKKLGVEIVSPI 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVL 265 + + +E E++++ + +L Sbjct: 240 KALTSDEEANSSAEENENRQEDLL 263 >gi|212550643|ref|YP_002308960.1| 30S ribosomal protein S2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229564292|sp|B6YQS7|RS2_AZOPC RecName: Full=30S ribosomal protein S2 gi|212548881|dbj|BAG83549.1| 30S ribosomal protein S2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 262 Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 137/222 (61%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + + QLLE+GV FGH WNP M YIF ER HIIDL +T+ + +A I + Sbjct: 3 RVSFEQLLEAGVHFGHLKRKWNPAMAPYIFMERKGIHIIDLHKTILKIDEASSAIKQIIR 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +ILFVATK QA V + V W GGM+TN+ T+ ++IQK+ ++ + + Sbjct: 63 SGRKILFVATKKQAKQVVADKVSFVGMPYVTEHWAGGMLTNFPTIRKAIQKMTVIDRMAH 122 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +K+ERL I R+R KL++ L I D+ LP +FVVD +E++A+ EA+RL IP Sbjct: 123 DGTFDLLSKRERLQITRQRAKLEKNLGSIADLKRLPSALFVVDVMKERIAVSEAKRLDIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + A+VDTNSNP+ +D++IP NDD++ SI + + + A I+G Sbjct: 183 VFAIVDTNSNPNGIDFIIPANDDATSSIEVILNAICDAIIEG 224 >gi|153809097|ref|ZP_01961765.1| hypothetical protein BACCAC_03407 [Bacteroides caccae ATCC 43185] gi|149128430|gb|EDM19649.1| hypothetical protein BACCAC_03407 [Bacteroides caccae ATCC 43185] Length = 278 Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 95/233 (40%), Positives = 143/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPSNVDFVIPANDDATKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|29349285|ref|NP_812788.1| 30S ribosomal protein S2 [Bacteroides thetaiotaomicron VPI-5482] gi|253570368|ref|ZP_04847777.1| 30S ribosomal protein S2 [Bacteroides sp. 1_1_6] gi|298384823|ref|ZP_06994382.1| ribosomal protein S2 [Bacteroides sp. 1_1_14] gi|61215766|sp|Q8A0Z4|RS2_BACTN RecName: Full=30S ribosomal protein S2 gi|29341193|gb|AAO78982.1| 30S ribosomal protein S2 (BS1) [Bacteroides thetaiotaomicron VPI-5482] gi|251840749|gb|EES68831.1| 30S ribosomal protein S2 [Bacteroides sp. 1_1_6] gi|298261967|gb|EFI04832.1| ribosomal protein S2 [Bacteroides sp. 1_1_14] Length = 278 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 95/233 (40%), Positives = 143/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPTNVDFVIPANDDATKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|318041333|ref|ZP_07973289.1| 30S ribosomal protein S2 [Synechococcus sp. CB0101] Length = 240 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ + A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVIAIEATRCGAAYVNQRWLGGMLTNWTTMRARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEAAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+V+++DTN +PDL D IP NDD+ RS+ L +A A +G Sbjct: 182 PLVSMLDTNCDPDLCDVPIPCNDDAVRSVQLVLGRLADAINEG 224 >gi|194476737|ref|YP_002048916.1| 30S ribosomal protein S2 [Paulinella chromatophora] gi|209573619|sp|B1X437|RR2_PAUCH RecName: Full=30S ribosomal protein S2, organellar chromatophore gi|171191744|gb|ACB42706.1| 30S ribosomal protein S2 [Paulinella chromatophora] Length = 239 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 135/220 (61%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAICMNNAYKWTRSAARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ + + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 65 KRFLFVGTKKQASEVIAQEAARCGAAYVNQRWLGGMLTNWTTMRARIDRLKDLERMEGSG 124 Query: 127 NQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ E R+L IP+V Sbjct: 125 SIAMRPKKEAAVLRRELDRLRKYLGGLKNMRRLPDVVILVDQRRETNAVLECRKLDIPLV 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++DTN +PDL D IP NDD+ RS+ L ++ A +G Sbjct: 185 SMLDTNCDPDLCDVPIPCNDDAVRSVQLVLSRLSDAINEG 224 >gi|291544884|emb|CBL17993.1| SSU ribosomal protein S2P [Ruminococcus sp. 18P13] Length = 222 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 95/201 (47%), Positives = 134/201 (66%), Gaps = 7/201 (3%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YIF ERN +IIDL +TV L++A + D A G +LFV TK QA D V E A R Sbjct: 1 MAPYIFTERNGIYIIDLQKTVKKLEEAYMFVRDLSAEGKSVLFVGTKKQAGDSVKEEATR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIERKRDK 144 + Y VN++WLGGMMTN+KT+ + +Q+L E+L E G KKE + + + +K Sbjct: 61 AGAYYVNARWLGGMMTNFKTIQRRLQRL---EQLHAMEADGTFNLLPKKEVIKLNLEIEK 117 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 L++ + GI++M LP +F+VD +EK+A+ EA++L IPIVA+VDTN +PD VDYVIPGN Sbjct: 118 LEKFMGGIKNMKQLPGALFIVDPRKEKIAVAEAKKLNIPIVAIVDTNCDPDEVDYVIPGN 177 Query: 205 DDSSRSIALFCDLVASAAIDG 225 DD+ R++ L +A+A I+G Sbjct: 178 DDAIRAVKLIAGTIANAIIEG 198 >gi|288801702|ref|ZP_06407144.1| ribosomal protein S2 [Prevotella melaninogenica D18] gi|288335744|gb|EFC74177.1| ribosomal protein S2 [Prevotella melaninogenica D18] Length = 271 Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 134/218 (61%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G +I Sbjct: 8 QLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKGIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKEVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +DY+IP NDD+ S+ A +G+ Sbjct: 188 DTNSDPKNIDYIIPANDDAKDSVETILAACCGAIAEGL 225 >gi|213964105|ref|ZP_03392345.1| ribosomal protein S2 [Capnocytophaga sputigena Capno] gi|213953242|gb|EEB64584.1| ribosomal protein S2 [Capnocytophaga sputigena Capno] Length = 241 Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 147/223 (65%), Gaps = 5/223 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+ LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + VA G Sbjct: 7 IKDLLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALKKIVASGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++++ K++ Sbjct: 67 KVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSIDKM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA++L IPI Sbjct: 125 GTFDTLSKREKLHVERMREKLEKNLGSIADMSRLPGALFVVDTLREHIAVKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 A+VDTNS+P VD+ IP NDD+S++I + A +G++ Sbjct: 185 FAMVDTNSDPREVDFAIPANDDASKAIEKVLSYITEAVNEGLS 227 >gi|189461536|ref|ZP_03010321.1| hypothetical protein BACCOP_02195 [Bacteroides coprocola DSM 17136] gi|189431742|gb|EDV00727.1| hypothetical protein BACCOP_02195 [Bacteroides coprocola DSM 17136] Length = 294 Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 95/233 (40%), Positives = 144/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 25 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAAEALKQIAKSGKKVL 84 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 85 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 144 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL IP+ A+VD Sbjct: 145 LSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVIDVLKENIAVREANRLGIPVFAIVD 204 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 205 TNSDPSNVDFVIPANDDATKSVEVILDACCAAMAEGLEERKAE-KVDMEAAGE 256 >gi|329942365|ref|ZP_08291175.1| ribosomal protein S2 [Chlamydophila psittaci Cal10] gi|313847603|emb|CBY16591.1| putative 30s ribosomal protein s2 [Chlamydophila psittaci RD1] gi|328815275|gb|EGF85263.1| ribosomal protein S2 [Chlamydophila psittaci Cal10] gi|328914237|gb|AEB55070.1| ribosomal protein S2 [Chlamydophila psittaci 6BC] Length = 276 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 141/222 (63%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+KAL + Sbjct: 6 LCNLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRKALPQVCKV 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 66 IKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEKD 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + + TKKE + ++ KL + L+GIR + P L+ VVD + EK+A+ EA++L I Sbjct: 126 LTQNSSYLTKKEIALLAKRHQKLLKNLEGIRYLKKAPGLVIVVDPSYEKIAVAEAKKLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++A+VDTN +P +DYVIP NDDS +SI L + + ID Sbjct: 186 PVLALVDTNCDPTPIDYVIPCNDDSLKSIRLIISTIKDSIID 227 >gi|62184694|ref|YP_219479.1| 30S ribosomal protein S2 [Chlamydophila abortus S26/3] gi|81313120|sp|Q5L763|RS2_CHLAB RecName: Full=30S ribosomal protein S2 gi|62147761|emb|CAH63505.1| putative 30s ribosomal protein s2 [Chlamydophila abortus S26/3] Length = 276 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 141/222 (63%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+KAL + Sbjct: 6 LCNLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRKALPQVCKV 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 66 IKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEKD 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + + TKKE + ++ KL + L+GIR + P L+ VVD + EK+A+ EA++L I Sbjct: 126 LTQNSSYLTKKEIALLAKRHQKLLKNLEGIRYLKKAPGLVIVVDPSYEKIAVAEAKKLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++A+VDTN +P +DYVIP NDDS +SI L + + ID Sbjct: 186 PVLALVDTNCDPTPIDYVIPCNDDSLKSIRLIISTIKDSIID 227 >gi|255690538|ref|ZP_05414213.1| ribosomal protein S2 [Bacteroides finegoldii DSM 17565] gi|260623992|gb|EEX46863.1| ribosomal protein S2 [Bacteroides finegoldii DSM 17565] Length = 278 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 94/233 (40%), Positives = 143/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 FVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYAN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|325859804|ref|ZP_08172934.1| ribosomal protein S2 [Prevotella denticola CRIS 18C-A] gi|327312987|ref|YP_004328424.1| 30S ribosomal protein S2 [Prevotella denticola F0289] gi|325482730|gb|EGC85733.1| ribosomal protein S2 [Prevotella denticola CRIS 18C-A] gi|326945255|gb|AEA21140.1| ribosomal protein S2 [Prevotella denticola F0289] Length = 277 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 95/215 (44%), Positives = 135/215 (62%), Gaps = 5/215 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G +I Sbjct: 8 QLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKGFARSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKEVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFA 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSI----ALFCDLVA 219 DTNS+P +DYVIP NDD+ S+ A CD +A Sbjct: 188 DTNSDPRNIDYVIPANDDAKDSVEVILAACCDAIA 222 >gi|67922290|ref|ZP_00515803.1| Ribosomal protein S2, bacterial and organelle form [Crocosphaera watsonii WH 8501] gi|67855866|gb|EAM51112.1| Ribosomal protein S2, bacterial and organelle form [Crocosphaera watsonii WH 8501] Length = 269 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 96/238 (40%), Positives = 145/238 (60%), Gaps = 10/238 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LL +GV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + Sbjct: 1 MPVVSLEDLLNAGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 SDKGKRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E+ G KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE + Sbjct: 121 ---EDSGQIARRPKKEASVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +L IP+++++DTN +PD D IP NDD+ RSI L +A A +G +H + +D Sbjct: 178 KLGIPMISLLDTNCDPDYADIPIPANDDAIRSIKLILGRLADAIYEG---RHGQLDSD 232 >gi|333029315|ref|ZP_08457376.1| ribosomal protein S2 [Bacteroides coprosuis DSM 18011] gi|332739912|gb|EGJ70394.1| ribosomal protein S2 [Bacteroides coprosuis DSM 18011] Length = 279 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 2/235 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + + G ++ Sbjct: 8 ELLEAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKELAKAGKKV 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQ 128 LFVATK QA + V E A V +W GGM+TN+ T+ ++++K+ ++ L + Sbjct: 68 LFVATKKQAKEIVAEKADSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDRLTKDGTYD 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +AI+EA RL IP+ A+V Sbjct: 128 NLSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKEDIAIREANRLGIPVFAIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 DTNSNP VDY+IP NDD+++SI L A +G+ + + D ++AGE Sbjct: 188 DTNSNPKNVDYIIPANDDATKSIELIIGKCCEAIKEGLEERKAE-KIDMEAAGEA 241 >gi|312892393|ref|ZP_07751888.1| SSU ribosomal protein S2P [Mucilaginibacter paludis DSM 18603] gi|311295177|gb|EFQ72351.1| SSU ribosomal protein S2P [Mucilaginibacter paludis DSM 18603] Length = 276 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 138/208 (66%), Gaps = 1/208 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH W+PKM +YIF ERN HIIDL++T+ +++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWDPKMSQYIFMERNGIHIIDLNKTLTKVEEAAAAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFVATK QA D V + AK V +WLGGM+TN+ TV +SI+K+ ++++L Sbjct: 61 VKSGRKVLFVATKKQAKDIVADYAKGVNMPYVTERWLGGMLTNFATVRKSIKKMSNIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKERL I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTYSNLSKKERLMIQRERIKLESLLGGIADLNRLPAALFLIDVKKEHIAVAEAMKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSR 209 IP A+VDTNS+P +D+ IP NDD+++ Sbjct: 181 IPTFAMVDTNSDPSNIDFPIPANDDATK 208 >gi|256819562|ref|YP_003140841.1| 30S ribosomal protein S2 [Capnocytophaga ochracea DSM 7271] gi|256581145|gb|ACU92280.1| ribosomal protein S2 [Capnocytophaga ochracea DSM 7271] Length = 241 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 147/223 (65%), Gaps = 5/223 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+ LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + VA G Sbjct: 7 IKDLLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALKKIVASGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++++ K++ Sbjct: 67 KVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSIDKM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA++L IPI Sbjct: 125 GTFDTLSKREKLHVERMREKLEKNLGSIADMSRLPGALFVVDTLREHIAVREAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 A+VDTNS+P VD+ IP NDD+S++I + A +G++ Sbjct: 185 FAMVDTNSDPREVDFAIPANDDASKAIEKVLSYITEAVNEGLS 227 >gi|282858724|ref|ZP_06267877.1| ribosomal protein S2 [Prevotella bivia JCVIHMP010] gi|282588473|gb|EFB93625.1| ribosomal protein S2 [Prevotella bivia JCVIHMP010] Length = 287 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 137/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + G +I Sbjct: 29 QLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGIAKSGKKI 88 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK Q+ + V + A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 89 LFVATKKQSKEVVADKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 148 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL IP+ A+V Sbjct: 149 NLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVIDVMKEHIAVKEANRLGIPVFAIV 208 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P VDYVIP NDD+ S+ + +A +G+ Sbjct: 209 DTNSDPKNVDYVIPANDDAKDSVEVILSACCAAIAEGL 246 >gi|307564998|ref|ZP_07627515.1| 30S ribosomal protein S2 [Prevotella amnii CRIS 21A-A] gi|307346311|gb|EFN91631.1| 30S ribosomal protein S2 [Prevotella amnii CRIS 21A-A] Length = 266 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 137/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + G +I Sbjct: 8 QLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK Q+ + V + A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQSKEVVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL IP+ A+V Sbjct: 128 NLSKRELLQISRQRAKLEKNLGSISDLTRLPAALFVIDVMKEHIAVKEANRLGIPVFAIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +DYVIP NDD+ S+ + SA +G+ Sbjct: 188 DTNSDPKNIDYVIPANDDAKDSVDVILTACCSAIAEGL 225 >gi|281421418|ref|ZP_06252417.1| ribosomal protein S2 [Prevotella copri DSM 18205] gi|281404490|gb|EFB35170.1| ribosomal protein S2 [Prevotella copri DSM 18205] Length = 256 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 135/219 (61%), Gaps = 5/219 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + G +I Sbjct: 8 QLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKTIAKTGRKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK Q D V E A VN +W GGM+TN+ T+ ++++K+ +++ LLN Sbjct: 68 LFVATKKQVKDVVAEKAASINMPYVNERWAGGMLTNFPTIRKAVKKMANIDRLLNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L + R+R KL++ L I DM LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQVSRQRAKLEKNLGSIADMARLPVALFVVDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 DTNS+P VDYVIP NDD+ S+ D + +A IA Sbjct: 188 DTNSDPKNVDYVIPANDDAKDSV----DAILTAVCGAIA 222 >gi|33862857|ref|NP_894417.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9313] gi|61215702|sp|Q7V7Z4|RS2_PROMM RecName: Full=30S ribosomal protein S2 gi|33634773|emb|CAE20759.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9313] Length = 239 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 141/234 (60%), Gaps = 7/234 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAICMNNAYKWTRSSARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVALEATRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEASVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 P+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + GAD Sbjct: 182 PLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEGRHGTNDQRGAD 235 >gi|317504784|ref|ZP_07962743.1| 30S ribosomal protein S2 [Prevotella salivae DSM 15606] gi|315664115|gb|EFV03823.1| 30S ribosomal protein S2 [Prevotella salivae DSM 15606] Length = 272 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 136/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + G +I Sbjct: 8 QLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKAIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V + A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKDIVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +F+VD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFIVDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +D+VIP NDD+ S+ V A +G+ Sbjct: 188 DTNSDPKNIDFVIPANDDAKDSVETILTAVCGAIAEGL 225 >gi|315225071|ref|ZP_07866888.1| 30S ribosomal protein S2 [Capnocytophaga ochracea F0287] gi|314944754|gb|EFS96786.1| 30S ribosomal protein S2 [Capnocytophaga ochracea F0287] Length = 241 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 147/223 (65%), Gaps = 5/223 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+ LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + VA G Sbjct: 7 IKDLLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALKKIVASGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++++ K++ Sbjct: 67 KVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSIDKM--KKD 124 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA++L IPI Sbjct: 125 GTFDTLSKREKLHVERLREKLEKNLGSIADMSRLPGALFVVDTLREHIAVKEAQKLNIPI 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 A+VDTNS+P VD+ IP NDD+S++I + A +G++ Sbjct: 185 FAMVDTNSDPREVDFAIPANDDASKAIEKVLSYITEAVNEGLS 227 >gi|124023366|ref|YP_001017673.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9303] gi|166225295|sp|A2CA98|RS2_PROM3 RecName: Full=30S ribosomal protein S2 gi|123963652|gb|ABM78408.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9303] Length = 239 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 141/234 (60%), Gaps = 7/234 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAICMNNAYKWTRSSARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVALEATRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEASVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 P+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + GAD Sbjct: 182 PLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEGRHGTNEQRGAD 235 >gi|22299231|ref|NP_682478.1| 30S ribosomal protein S2 [Thermosynechococcus elongatus BP-1] gi|34222742|sp|Q8DIA2|RS2_THEEB RecName: Full=30S ribosomal protein S2 gi|22295413|dbj|BAC09240.1| 30S ribosomal protein S2 [Thermosynechococcus elongatus BP-1] Length = 263 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 135/224 (60%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ Q+LE+GV FGH+ WNP+M YIF RN HIIDL QT ++++A I + + Sbjct: 4 LSLAQMLEAGVHFGHQARRWNPRMAPYIFTVRNGVHIIDLVQTAQLVEEAYNYIRNAAEK 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G R LF+ TK QA+ V + A R Y VN +WLGGM+TNW T+ + +L++LE + Sbjct: 64 GKRFLFIGTKRQAAGIVEQEALRCGSYYVNQRWLGGMLTNWTTIKTRVDRLKELESM--- 120 Query: 126 ENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G K+E + R+ +L++ L GI+ M LPD+ +VD RE A+ E +L Sbjct: 121 EESGLIDLRPKQEASALRRELARLQKYLGGIKQMRRLPDIAIIVDVKREYNAVAECHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA++DTN +P VD IP NDD+ RSI L +A A +G Sbjct: 181 IPIVALLDTNCDPTQVDIPIPANDDAIRSIKLIVGKLADAIYEG 224 >gi|126657336|ref|ZP_01728495.1| 30S ribosomal protein S2 [Cyanothece sp. CCY0110] gi|126621323|gb|EAZ92035.1| 30S ribosomal protein S2 [Cyanothece sp. CCY0110] Length = 271 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 96/238 (40%), Positives = 144/238 (60%), Gaps = 10/238 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LL +GV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + Sbjct: 1 MPVVSLEDLLNAGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNG 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 ADKGRRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM 120 Query: 123 LNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E G KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE + Sbjct: 121 ---EESGQIARRPKKEASVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQ 177 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +L IP+++++DTN +PD D IP NDD+ RSI L +A A +G +H + +D Sbjct: 178 KLGIPMISLLDTNCDPDYADIPIPANDDAIRSIKLILGKLADAIYEG---RHGQLDSD 232 >gi|332883240|gb|EGK03523.1| 30S ribosomal protein S2 [Dysgonomonas mossii DSM 22836] Length = 283 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 138/218 (63%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+GV FGH WNP M YIF ERN HIIDL +T+ ++A + G +I Sbjct: 8 QLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTIAKTEEAAAALKQIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA V + A+ V +W GGM+TN+ T+ ++I+K+ +++++ Sbjct: 68 LFVATKKQAKQVVTDLAQSVNMPYVVERWPGGMLTNFPTIRKAIKKMSTIDKMIKDGTFD 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+ERL + R+R KL++ L I+D+ LP +FVVD +E +A++EA RL IP+ A+V Sbjct: 128 TLSKRERLQVTRQRAKLEKTLGSIQDLTRLPSALFVVDVMKEHIAVREANRLGIPVFAMV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P+ +D+VIP NDD+++SI L + +G+ Sbjct: 188 DTNSSPEDIDFVIPANDDAAKSIELILGSLCEGIKEGL 225 >gi|330850613|ref|YP_004376494.1| ribosomal protein S2 [Ptilidium pulcherrimum] gi|302024742|gb|ADK89588.1| ribosomal protein S2 [Ptilidium pulcherrimum] Length = 235 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/220 (42%), Positives = 139/220 (63%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH+ WNPKM YIF ER HII+L+QT L +A + S+ ++G Sbjct: 10 LEEMMEAGVHFGHQARKWNPKMAPYIFTERRGIHIINLTQTARFLSEACDLASNAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE--ELLNK 125 + L V TK QA+D V AA ++ + VN KWLGGM+TNW T+ +QK +DLE +L Sbjct: 70 QFLIVGTKYQAADLVASAASKARCHYVNQKWLGGMLTNWSTIQTRLQKFKDLENKKLTGT 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE +++R+ D+L++ L GI+ M LPD++ ++D +E AIQE L IP + Sbjct: 130 FNQ-LPKKEAADLDRQLDQLQKYLGGIKYMTNLPDIVIIIDQQKEFTAIQECLTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PD+ D IP NDD+ SI + + SA +G Sbjct: 189 CLVDTDCDPDVTDIPIPANDDARASIRWILNKLTSAIREG 228 >gi|33865624|ref|NP_897183.1| 30S ribosomal protein S2 [Synechococcus sp. WH 8102] gi|61215691|sp|Q7U795|RS2_SYNPX RecName: Full=30S ribosomal protein S2 gi|33632794|emb|CAE07605.1| 30S ribosomal protein S2 [Synechococcus sp. WH 8102] Length = 239 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 141/224 (62%), Gaps = 9/224 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRSAARSG 64 Query: 67 GRILFVATKSQASDCV-MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 R LFV TK QAS+ V +EAA+ A Y VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 65 KRFLFVGTKKQASEVVALEAARCGAAY-VNQRWLGGMLTNWTTMKARIDRLKDLERM--- 120 Query: 126 ENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKTMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEG 224 >gi|288928906|ref|ZP_06422752.1| ribosomal protein S2 [Prevotella sp. oral taxon 317 str. F0108] gi|288329890|gb|EFC68475.1| ribosomal protein S2 [Prevotella sp. oral taxon 317 str. F0108] Length = 290 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 137/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + G RI Sbjct: 27 QLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKRI 86 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++L++ Sbjct: 87 LFVATKKQAKDVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKLMSDGTFA 146 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L + R+R KL++ L I D+ LP +FVVD +E +A++EA+RL IP+ A+V Sbjct: 147 NLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVVDVMKEAIAVKEAKRLGIPVFAMV 206 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNSNP +D+VIP NDD+ SI + +A +G+ Sbjct: 207 DTNSNPRDIDFVIPANDDAKDSIEVVLTACCAAIAEGL 244 >gi|332826873|gb|EGJ99673.1| 30S ribosomal protein S2 [Dysgonomonas gadei ATCC BAA-286] Length = 284 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 92/221 (41%), Positives = 137/221 (61%), Gaps = 5/221 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++GV FGH WNP M YIF ERN HIIDL +T+ + A + Sbjct: 1 MAKLEFDQLLDAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTIAKTEDAAAAMKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA V + A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKQVVTDLALSINMPYVVERWPGGMLTNFPTIRKAVKKMSTIDKM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+ERL + R+R KL++ L I+D+ LP +FVVD +E +A++EA RL Sbjct: 121 VKDGTFDTLSKRERLQVTRQRAKLEKTLGSIQDLTRLPSALFVVDVMKEHIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL----FCDLV 218 IP+ A+VDTNSNPD +D+VIP NDD+++SI L CD + Sbjct: 181 IPVFAMVDTNSNPDDIDFVIPANDDAAKSIELILGSLCDAI 221 >gi|189501515|ref|YP_001957232.1| 30S ribosomal protein S2 [Candidatus Amoebophilus asiaticus 5a2] gi|238692320|sp|B3EU84|RS2_AMOA5 RecName: Full=30S ribosomal protein S2 gi|189496956|gb|ACE05503.1| ribosomal protein S2 [Candidatus Amoebophilus asiaticus 5a2] Length = 313 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 95/234 (40%), Positives = 142/234 (60%), Gaps = 1/234 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T + LL++GV GH + WNP M +IF E HIIDL++T+ LQ+A + Sbjct: 4 LTQKDLLKAGVHLGHLSRKWNPSMAPFIFMESRGIHIIDLNKTLSQLQEAADTLQAVARS 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +ILFVATK QA + V + AK + +WLGG +TN+ T+ + I+KL +E ++ Sbjct: 64 GKKILFVATKKQAKELVAQTAKSLNMPYMTERWLGGTLTNFITIRRLIKKLTSMERMMKS 123 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE+L I R +DKL+R L G+ D+ LP + VVD +E +A+QEAR+L IPI Sbjct: 124 ATYKNMAKKEQLMIARDKDKLERVLGGVLDLTKLPGALVVVDIMKESIAVQEARKLGIPI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +A+ DTN +PDLVDY IP NDD++ +I L + A +G++ + A+ + Sbjct: 184 IALADTNVDPDLVDYPIPSNDDATPAIELIVRTLGEAINEGLSMRQEDKAAEAQ 237 >gi|148242373|ref|YP_001227530.1| 30S ribosomal protein S2 [Synechococcus sp. RCC307] gi|166226765|sp|A5GTG8|RS2_SYNR3 RecName: Full=30S ribosomal protein S2 gi|147850683|emb|CAK28177.1| 30S ribosomal protein S2 [Synechococcus sp. RCC307] Length = 235 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/224 (42%), Positives = 143/224 (63%), Gaps = 9/224 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM+RYI C RN HIIDL QT + A + + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMQRYIHCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCV-MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 R LFV TK QA++ V +EA++ A Y VN +WLGGM+TNW T+ I++L+DLE + Sbjct: 65 KRFLFVGTKKQAAEVVALEASRCGASY-VNQRWLGGMLTNWSTMRARIERLKDLERM--- 120 Query: 126 ENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + R+ D+L++ L G+++M LPD++ ++D RE A+ E ++L Sbjct: 121 ESSGAIAMRPKKEASVLRRELDRLQKYLGGLKNMRRLPDVVVLIDQKREYNAVLECQKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V+++DTN +PDL D IP NDD+ RS+ L +A A +G Sbjct: 181 IPVVSMLDTNCDPDLCDVPIPCNDDAVRSVQLIIGRLADAINEG 224 >gi|313203802|ref|YP_004042459.1| SSU ribosomal protein s2p [Paludibacter propionicigenes WB4] gi|312443118|gb|ADQ79474.1| SSU ribosomal protein S2P [Paludibacter propionicigenes WB4] Length = 277 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 91/232 (39%), Positives = 144/232 (62%), Gaps = 2/232 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LLE+G FGH WNP M YIF ERN+ HIIDL +TV + +A + G +I Sbjct: 8 ELLEAGCHFGHLKRKWNPAMAPYIFMERNDIHIIDLHKTVVKIDEAAAALKQIAKSGRKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 68 LFVATKKQAKDVVADKASAVGMPYITERWAGGMLTNFPTIRKAVKKMTTIDKMATDGTFD 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E+L I R+R+KL++ L I D+ LP +FVVD +E +A+ EA+RL IP+ +V Sbjct: 128 NISKREKLQITRQREKLEKNLGSIADLTRLPSALFVVDVMKEHIAVLEAQRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 DTNSNP+ +D+VIP NDD+++S+ + + +A +G+ + DT++A Sbjct: 188 DTNSNPNNIDFVIPANDDATKSVDVILSAMVAAIQEGL-EERKVEKVDTEAA 238 >gi|330444069|ref|YP_004377055.1| 30S ribosomal protein [Chlamydophila pecorum E58] gi|328807179|gb|AEB41352.1| 30S ribosomal protein [Chlamydophila pecorum E58] Length = 283 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 93/217 (42%), Positives = 139/217 (64%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R L+E+G FGH+ WNPKM+ YIF E+N HII+L++T+ L+ +L I V Sbjct: 9 SLRDLIEAGAHFGHQTRRWNPKMKIYIFEEKNGLHIINLAKTLQQLRHSLPFIRQVVEGN 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA V +AA + ++ V+ +WLGGM+TN T+ S++ L +E Sbjct: 69 KSILFVGTKKQAKCVVRDAAIEAGEFFVSERWLGGMLTNMATIRNSVKTLDKIERNFEHN 128 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 FTKKE + +K+ K+ + L+G+R M LP L+ VVD + EK+A+ EAR+L IP++A Sbjct: 129 PSFFTKKEIALLAKKQQKIIKNLEGVRYMKKLPGLLIVVDPSYEKIAVAEARKLNIPVLA 188 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDTN +P +D+VIP NDDS +SI L +++ I Sbjct: 189 LVDTNCDPTPIDHVIPCNDDSLKSIRLIINVIKENII 225 >gi|87302804|ref|ZP_01085615.1| 30S ribosomal protein S2 [Synechococcus sp. WH 5701] gi|87282687|gb|EAQ74645.1| 30S ribosomal protein S2 [Synechococcus sp. WH 5701] Length = 238 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRNASRSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ + A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVIAIEASRCGAAYVNQRWLGGMLTNWSTMRARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ E R+L I Sbjct: 122 SSGAIAMRPKKEAAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRENNAVLECRKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+V+++DTN +PDL D IP NDD+ RS+ L +A A +G Sbjct: 182 PLVSMLDTNCDPDLADVPIPCNDDAVRSVQLVLGRLADAINEG 224 >gi|212690772|ref|ZP_03298900.1| hypothetical protein BACDOR_00259 [Bacteroides dorei DSM 17855] gi|237723690|ref|ZP_04554171.1| 30S ribosomal protein S2 [Bacteroides sp. D4] gi|265756812|ref|ZP_06090800.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_33FAA] gi|212666649|gb|EEB27221.1| hypothetical protein BACDOR_00259 [Bacteroides dorei DSM 17855] gi|229437901|gb|EEO47978.1| 30S ribosomal protein S2 [Bacteroides dorei 5_1_36/D4] gi|263233598|gb|EEZ19218.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_33FAA] Length = 279 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPSMAPYIFMERNGIHIIDLHKTVAKVDEAADALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ A+VD Sbjct: 129 LSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKENIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D A +G+ + + D ++AGE Sbjct: 189 TNSDPSNVDFVIPANDDATKSVEVILDACCGAIAEGLEERKAEK-VDMEAAGE 240 >gi|29839814|ref|NP_828920.1| 30S ribosomal protein S2 [Chlamydophila caviae GPIC] gi|33301546|sp|Q824U3|RS2_CHLCV RecName: Full=30S ribosomal protein S2 gi|29834161|gb|AAP04798.1| ribosomal protein S2 [Chlamydophila caviae GPIC] Length = 276 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 149/242 (61%), Gaps = 4/242 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+ AL + Sbjct: 6 LCTLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRNALPHVCKV 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 66 IKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMATIRNSIKTLDKIEKD 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + + TKKE + ++ KL + L+GIR + +P L+ VVD + EK+A+ EA++L I Sbjct: 126 LTQNSSCLTKKEIALLAKRHQKLLKNLEGIRYLRKIPGLVIVVDPSYEKIAVAEAKKLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++A+VDTN +P +DYV+P NDDS +SI L+ SA D I +G + S + Sbjct: 186 PVLALVDTNCDPTPIDYVVPCNDDSLKSIR----LIISAIKDNIINTKKKLGVEIVSPIK 241 Query: 243 TV 244 T+ Sbjct: 242 TL 243 >gi|15675849|ref|NP_270023.1| 30S ribosomal protein S2 [Streptococcus pyogenes M1 GAS] gi|19746964|ref|NP_608100.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS8232] gi|71911593|ref|YP_283143.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS5005] gi|94989421|ref|YP_597522.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS9429] gi|94991356|ref|YP_599456.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS10270] gi|94993310|ref|YP_601409.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS2096] gi|94995268|ref|YP_603366.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS10750] gi|306826498|ref|ZP_07459809.1| 30S ribosomal protein S2 [Streptococcus pyogenes ATCC 10782] gi|57014109|sp|P68901|RS2_STRP1 RecName: Full=30S ribosomal protein S2 gi|57014110|sp|P68902|RS2_STRP8 RecName: Full=30S ribosomal protein S2 gi|123080163|sp|Q1J9E6|RS2_STRPB RecName: Full=30S ribosomal protein S2 gi|123080282|sp|Q1JEJ7|RS2_STRPD RecName: Full=30S ribosomal protein S2 gi|123080354|sp|Q1JJJ5|RS2_STRPC RecName: Full=30S ribosomal protein S2 gi|123382121|sp|Q1J4B4|RS2_STRPF RecName: Full=30S ribosomal protein S2 gi|13623081|gb|AAK34744.1| 30S ribosomal protein S2 [Streptococcus pyogenes M1 GAS] gi|19749217|gb|AAL98599.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS8232] gi|71854375|gb|AAZ52398.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS5005] gi|94542929|gb|ABF32978.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS9429] gi|94544864|gb|ABF34912.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS10270] gi|94546818|gb|ABF36865.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS2096] gi|94548776|gb|ABF38822.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS10750] gi|304431357|gb|EFM34355.1| 30S ribosomal protein S2 [Streptococcus pyogenes ATCC 10782] Length = 255 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|71904426|ref|YP_281229.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS6180] gi|123747738|sp|Q48QY6|RS2_STRPM RecName: Full=30S ribosomal protein S2 gi|71803521|gb|AAX72874.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS6180] Length = 255 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|282881185|ref|ZP_06289872.1| ribosomal protein S2 [Prevotella timonensis CRIS 5C-B1] gi|281304989|gb|EFA97062.1| ribosomal protein S2 [Prevotella timonensis CRIS 5C-B1] Length = 295 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 138/219 (63%), Gaps = 5/219 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + G +I Sbjct: 8 QLLQAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKDIVAEKAASVNMPYVIERWAGGMLTNFPTIRKAVKKMANIDKLMNDGTFA 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L + R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ A+V Sbjct: 128 NISKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLGIPVFAIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 DTNS+P +D+VIP NDD+ SI D++ +A IA Sbjct: 188 DTNSDPKNIDFVIPANDDAKDSI----DVILTACCQAIA 222 >gi|30468231|ref|NP_849118.1| ribosomal protein S2 [Cyanidioschyzon merolae strain 10D] gi|75272297|sp|Q85FR5|RR2_CYAME RecName: Full=30S ribosomal protein S2, chloroplastic gi|30409331|dbj|BAC76280.1| 30S ribosomal protein S2 [Cyanidioschyzon merolae strain 10D] Length = 221 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 137/218 (62%), Gaps = 3/218 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+QLLE+GV GH+ WNPKM Y++ +R HIIDL QT +L +A + ++ V+ G Sbjct: 4 IQQLLEAGVHLGHQAKRWNPKMLPYLYTQRMGIHIIDLVQTAHLLNQACETLTVQVSEGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QAS V E A R ++ +N +WLGG++TNW TV +++ R ELL + Sbjct: 64 RVLFVGTKPQASVVVEEEATRCGEFFINQRWLGGLLTNWTTVQSRLKRWR---ELLEADM 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 TKKE + R+ ++L R + GI++M +PD++ VVD N+E A+ E +L I + + Sbjct: 121 DHLTKKEASALRRELNQLNRQMRGIQNMDQIPDIVIVVDPNKENTAVLECHKLGILTIGI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VDTN++P+ VD IP NDD+ S+ L +A A + G Sbjct: 181 VDTNADPESVDLAIPANDDAIASLQLILSCLADAILKG 218 >gi|78184820|ref|YP_377255.1| 30S ribosomal protein S2 [Synechococcus sp. CC9902] gi|116070695|ref|ZP_01467964.1| 30S ribosomal protein S2 [Synechococcus sp. BL107] gi|123743537|sp|Q3AXI9|RS2_SYNS9 RecName: Full=30S ribosomal protein S2 gi|78169114|gb|ABB26211.1| SSU ribosomal protein S2P [Synechococcus sp. CC9902] gi|116066100|gb|EAU71857.1| 30S ribosomal protein S2 [Synechococcus sp. BL107] Length = 239 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 144/235 (61%), Gaps = 9/235 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL +T + A + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVKTAVCMNNAYKWTRSAARSG 64 Query: 67 GRILFVATKSQASDCV-MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 R LFV TK QAS+ V +EAA+ A Y VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 65 KRFLFVGTKKQASEVVALEAARCGAAY-VNQRWLGGMLTNWTTMKARIDRLKDLERM--- 120 Query: 126 ENQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKTMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEGRHGSNEQRGGD 235 >gi|300775868|ref|ZP_07085728.1| 30S ribosomal protein S2 [Chryseobacterium gleum ATCC 35910] gi|300505418|gb|EFK36556.1| 30S ribosomal protein S2 [Chryseobacterium gleum ATCC 35910] Length = 253 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 91/226 (40%), Positives = 144/226 (63%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LLE+GV FGH WNP M YIF E+N HI+DL +T L +A + Sbjct: 1 MAKANVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIVDLHKTAVKLDEACNALEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 TSAGKKVLFVATKKQAKEVVAKHASELNMPYITERWPGGMLTNFVTIRKAVKKMNAIDKM 120 Query: 123 LNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ F +KKERL ++R+R L++ L I DM LP +FVVD RE +A+ EA++ Sbjct: 121 --KKDGTFETLSKKERLQVDRQRANLEKNLGSIADMVRLPSAVFVVDILREHIAVTEAKK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP+ +VDTNS+P VD+VIPGNDD+S+SI + +V+ + +G Sbjct: 179 LGIPVFGIVDTNSDPRKVDFVIPGNDDASKSIDMILSVVSESIKEG 224 >gi|293363738|ref|ZP_06610481.1| ribosomal protein S2 [Mycoplasma alligatoris A21JP2] gi|292552703|gb|EFF41470.1| ribosomal protein S2 [Mycoplasma alligatoris A21JP2] Length = 314 Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 87/216 (40%), Positives = 138/216 (63%), Gaps = 2/216 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNN--THIIDLSQTVPMLQKALQVISDTVARGG 67 +LLE+G FGH+ WNPKM Y+ + N HIID+++T L+ A +I+ A+ Sbjct: 28 KLLEAGAYFGHKTHQWNPKMRDYLVPNKTNRGAHIIDITKTQKYLEFAYSLINKFAAKKA 87 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +FV TK QA + EAA+R+ Y V +WLGG +TN +T+ ++ + LE Sbjct: 88 SFIFVGTKKQAHAAIKEAAERTQSYYVTERWLGGTLTNNQTIMSRVKTMEQLEAKAASGF 147 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G+TKKE + +++ DKL + LDGIR+M +P +M V D N +++A++EA+R I ++ + Sbjct: 148 KGYTKKEAILFQKELDKLHKNLDGIRNMRHIPQVMIVADPNEDEIAVKEAKRKGIKVIGI 207 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +D+NSNPD +D+ IP NDDS++SIAL ++A A + Sbjct: 208 LDSNSNPDALDFGIPANDDSAKSIALVMTILADAIV 243 >gi|33240275|ref|NP_875217.1| 30S ribosomal protein S2 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|61215706|sp|Q7VCB6|RS2_PROMA RecName: Full=30S ribosomal protein S2 gi|33237802|gb|AAP99869.1| Ribosomal protein S2 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 238 Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 137/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL +T + A + + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVKTAVCMNNAYKWTRNAAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVAQEAARCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + + ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEASVLRHELERLQKYLGGLKGMKRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 PLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRIADAINEG 224 >gi|260910527|ref|ZP_05917195.1| 30S ribosomal protein S2 [Prevotella sp. oral taxon 472 str. F0295] gi|260635369|gb|EEX53391.1| 30S ribosomal protein S2 [Prevotella sp. oral taxon 472 str. F0295] Length = 271 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 137/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + G RI Sbjct: 8 QLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKRI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKDVVAEKASSVNMPYVIERWPGGMLTNFPTIRKAVKKMANIDKLMNDGTFA 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L + R+R KL++ L I D+ LP +FVVD +E +A++EA+RL IP+ A+V Sbjct: 128 NLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVVDVMKEAIAVKEAKRLGIPVFAMV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +D++IP NDD+ SI + +A +G+ Sbjct: 188 DTNSDPRDIDFIIPANDDAKDSIEVVLTACCAAIAEGL 225 >gi|21911318|ref|NP_665586.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS315] gi|28896691|ref|NP_803041.1| 30S ribosomal protein S2 [Streptococcus pyogenes SSI-1] gi|50915125|ref|YP_061097.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS10394] gi|139474538|ref|YP_001129254.1| 30S ribosomal protein S2 [Streptococcus pyogenes str. Manfredo] gi|25009191|sp|Q8K5L2|RS2_STRP3 RecName: Full=30S ribosomal protein S2 gi|57014113|sp|Q5X9J9|RS2_STRP6 RecName: Full=30S ribosomal protein S2 gi|166226760|sp|A2RGS9|RS2_STRPG RecName: Full=30S ribosomal protein S2 gi|21905533|gb|AAM80389.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS315] gi|28811945|dbj|BAC64874.1| 30S ribosomal protein S2 [Streptococcus pyogenes SSI-1] gi|50904199|gb|AAT87914.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS10394] gi|134272785|emb|CAM31061.1| 30S ribosomal protein S2 [Streptococcus pyogenes str. Manfredo] Length = 255 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 154/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|237708157|ref|ZP_04538638.1| 30S ribosomal protein S2 [Bacteroides sp. 9_1_42FAA] gi|229457710|gb|EEO63431.1| 30S ribosomal protein S2 [Bacteroides sp. 9_1_42FAA] Length = 279 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPSMAPYIFMERNGIHIIDLHKTVAKVDEAADALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ A+VD Sbjct: 129 LSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKENIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D A +G+ + + D ++AGE Sbjct: 189 TNSDPSNVDFVIPANDDATKSVEVILDACCGAIAEGLEERKAEK-IDMEAAGE 240 >gi|281355894|ref|ZP_06242387.1| ribosomal protein S2 [Victivallis vadensis ATCC BAA-548] gi|281317263|gb|EFB01284.1| ribosomal protein S2 [Victivallis vadensis ATCC BAA-548] Length = 281 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 136/220 (61%), Gaps = 1/220 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LLE+G FGH+ WNPKM+ Y++ +N IIDL++T+ + A + T Sbjct: 1 MAKISINDLLEAGCHFGHQTRRWNPKMKDYVYGAKNGISIIDLTKTMYQIAAACNFLQRT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK Q + V E A + YCV+ +WLGG +TN T+ +SI K+ +++ Sbjct: 61 VANGGEILFVGTKRQLREIVKELADTTGMYCVSERWLGGTLTNNVTIRKSITKMAEIDGT 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LN + + KKE + R+ +KL R LDGI M LP + V+D E A++EA +L Sbjct: 121 LNSDAAKSMKKKEIAGLSRRAEKLHRDLDGIAGMKRLPAALVVIDVYNEINAVREANKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IPIVA+VDTN +P LVDY + NDD+ +S+ + +L A A Sbjct: 181 IPIVAIVDTNGDPSLVDYPVAANDDAVKSVQIITNLFAEA 220 >gi|150004193|ref|YP_001298937.1| 30S ribosomal protein S2 [Bacteroides vulgatus ATCC 8482] gi|254884790|ref|ZP_05257500.1| 30S ribosomal protein S2 [Bacteroides sp. 4_3_47FAA] gi|294775223|ref|ZP_06740747.1| ribosomal protein S2 [Bacteroides vulgatus PC510] gi|319644147|ref|ZP_07998672.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_40A] gi|166225241|sp|A6L0V1|RS2_BACV8 RecName: Full=30S ribosomal protein S2 gi|149932617|gb|ABR39315.1| 30S ribosomal protein S2 [Bacteroides vulgatus ATCC 8482] gi|254837583|gb|EET17892.1| 30S ribosomal protein S2 [Bacteroides sp. 4_3_47FAA] gi|294450928|gb|EFG19404.1| ribosomal protein S2 [Bacteroides vulgatus PC510] gi|317384269|gb|EFV65240.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_40A] Length = 279 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 95/233 (40%), Positives = 141/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPSMAPYIFMERNGIHIIDLHKTVAKVDEAADALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL IP+ A+VD Sbjct: 129 LSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVIDVLKENIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D A +G+ + + D ++AGE Sbjct: 189 TNSDPSNVDFVIPANDDATKSVEVILDACCGAIAEGLEERKAEK-VDMEAAGE 240 >gi|288925269|ref|ZP_06419204.1| ribosomal protein S2 [Prevotella buccae D17] gi|315607302|ref|ZP_07882302.1| 30S ribosomal protein S2 [Prevotella buccae ATCC 33574] gi|288338034|gb|EFC76385.1| ribosomal protein S2 [Prevotella buccae D17] gi|315251005|gb|EFU30994.1| 30S ribosomal protein S2 [Prevotella buccae ATCC 33574] Length = 277 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 136/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + G +I Sbjct: 8 QLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKGIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA + V + A V +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKEIVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKLMNDGTFA 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNSNP +DYVIP NDD+ S+ + V A +G+ Sbjct: 188 DTNSNPKNIDYVIPANDDAKDSVEVILAAVCGAIAEGL 225 >gi|172035621|ref|YP_001802122.1| 30S ribosomal protein S2 [Cyanothece sp. ATCC 51142] gi|226793816|sp|B1WQZ8|RS2_CYAA5 RecName: Full=30S ribosomal protein S2 gi|171697075|gb|ACB50056.1| 30S ribosomal protein S2 [Cyanothece sp. ATCC 51142] Length = 269 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 95/234 (40%), Positives = 142/234 (60%), Gaps = 10/234 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ LL +GV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + +G Sbjct: 5 SLEDLLNAGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNNADKG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + E Sbjct: 65 KRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE ++L I Sbjct: 122 ESGQIARRPKKEASVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 P+++++DTN +PD D IP NDD+ RSI L +A A +G +H + +D Sbjct: 182 PMISLLDTNCDPDYADIPIPANDDAIRSIKLILGKLADAIYEG---RHGQLDSD 232 >gi|255026414|ref|ZP_05298400.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J2-003] Length = 223 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 88/197 (44%), Positives = 135/197 (68%), Gaps = 1/197 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M++YIF ERN +IIDL +TV + +A + + + G ILFV TK QA + V + A R Sbjct: 1 MKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKR 147 S QY VN +WLGG +TN++T+ + IQ L+ +E + + + KKE + ++++++KL+R Sbjct: 61 SGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLER 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ +VDTN +PD +DYVIP NDD+ Sbjct: 121 FLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDA 180 Query: 208 SRSIALFCDLVASAAID 224 R++ L +A A I+ Sbjct: 181 IRAVKLLTAKMADAIIE 197 >gi|224025127|ref|ZP_03643493.1| hypothetical protein BACCOPRO_01861 [Bacteroides coprophilus DSM 18228] gi|224018363|gb|EEF76361.1| hypothetical protein BACCOPRO_01861 [Bacteroides coprophilus DSM 18228] Length = 279 Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 95/233 (40%), Positives = 144/233 (61%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVVKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL++ L I ++ LP +FVVD +E +A++EA RL IP+ A+VD Sbjct: 129 LSKREILQISRQRAKLEKNLGSIAELTRLPSALFVVDVLKENIAVREANRLGIPVFAIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P VD+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPTNVDFVIPANDDATKSVEVILDACCAAMAEGLEERKAE-KVDMEAAGE 240 >gi|255011773|ref|ZP_05283899.1| 30S ribosomal protein S2 [Bacteroides fragilis 3_1_12] gi|313149610|ref|ZP_07811803.1| 30S ribosomal protein S2 [Bacteroides fragilis 3_1_12] gi|313138377|gb|EFR55737.1| 30S ribosomal protein S2 [Bacteroides fragilis 3_1_12] Length = 278 Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L + Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTTIDKLTADGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|28202152|ref|NP_777393.1| ribosomal protein S2 [Anthoceros formosae] gi|41688602|sp|Q85AW7|RR2_ANTFO RecName: Full=30S ribosomal protein S2, chloroplastic gi|27807854|dbj|BAC55329.1| ribosomal protein S2 [Anthoceros formosae] gi|27807951|dbj|BAC55420.1| ribosomal protein S2 [Anthoceros formosae] Length = 235 Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 140/224 (62%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +++E+G+ FGH+ WNPKM+ YIF ER HI+++++T +L +A +++ ++ Sbjct: 8 INLEEMMEAGIHFGHQAAKWNPKMKPYIFTERRGIHILNVTKTARLLSEACDFVANAASK 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G + L V TK QA+D V AA ++ + VN KWLGGM+TNW T+ ++LR E+L K Sbjct: 68 GKQFLIVGTKYQAADLVASAALKARCHYVNQKWLGGMLTNWSTIE---KRLRKFEDLQTK 124 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +N G KKE N+ER+ +L++ L GIR M LPD++ +VD +E AI+E L Sbjct: 125 KNMGALDELPKKEAANLERQLAQLQKYLGGIRYMTNLPDIVIIVDQQKELTAIRECINLN 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + +VDT+ +PDL D IP NDD+ SI D + SA +G Sbjct: 185 IPTICLVDTDCDPDLTDISIPANDDARASIRWVLDKLTSAIQEG 228 >gi|53715295|ref|YP_101287.1| 30S ribosomal protein S2 [Bacteroides fragilis YCH46] gi|60683230|ref|YP_213374.1| 30S ribosomal protein S2 [Bacteroides fragilis NCTC 9343] gi|265767782|ref|ZP_06095314.1| ribosomal protein S2 [Bacteroides sp. 2_1_16] gi|61215471|sp|Q64P29|RS2_BACFR RecName: Full=30S ribosomal protein S2 gi|81313718|sp|Q5L8W7|RS2_BACFN RecName: Full=30S ribosomal protein S2 gi|52218160|dbj|BAD50753.1| 30S ribosomal protein S2 (BS1) [Bacteroides fragilis YCH46] gi|60494664|emb|CAH09465.1| putative 30S ribosomal protein S2 [Bacteroides fragilis NCTC 9343] gi|263252454|gb|EEZ23982.1| ribosomal protein S2 [Bacteroides sp. 2_1_16] gi|301164749|emb|CBW24308.1| putative 30S ribosomal protein S2 [Bacteroides fragilis 638R] Length = 278 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L + Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTTIDKLTADGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|113955131|ref|YP_730483.1| 30S ribosomal protein S2 [Synechococcus sp. CC9311] gi|123132587|sp|Q0IAN9|RS2_SYNS3 RecName: Full=30S ribosomal protein S2 gi|113882482|gb|ABI47440.1| ribosomal protein S2 [Synechococcus sp. CC9311] Length = 238 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G Sbjct: 5 TLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVAQEALRCGSSYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G+++M +PD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEGAVLRRELERLQKYLGGLKNMRRIPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V+++DTN +PDL + IP NDD+ RSI L +A A +G Sbjct: 182 SLVSMLDTNCDPDLCEVPIPCNDDAVRSIQLVLSRLADAINEG 224 >gi|253567186|ref|ZP_04844636.1| 30S ribosomal protein S2 [Bacteroides sp. 3_2_5] gi|251944017|gb|EES84536.1| 30S ribosomal protein S2 [Bacteroides sp. 3_2_5] Length = 278 Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQG 129 FVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L + Sbjct: 69 FVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTTIDKLTADGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 240 >gi|329962604|ref|ZP_08300552.1| ribosomal protein S2 [Bacteroides fluxus YIT 12057] gi|328529635|gb|EGF56533.1| ribosomal protein S2 [Bacteroides fluxus YIT 12057] Length = 278 Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 93/237 (39%), Positives = 143/237 (60%), Gaps = 2/237 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 TNS+P +D+VIP NDD+++SI + D +A +G+ + + D ++AGE + Sbjct: 189 TNSDPSNIDFVIPANDDATKSIEVILDACCAAMQEGLEERKAE-KVDMEAAGEAAAN 244 >gi|323343333|ref|ZP_08083560.1| 30S ribosomal protein S2 [Prevotella oralis ATCC 33269] gi|323095152|gb|EFZ37726.1| 30S ribosomal protein S2 [Prevotella oralis ATCC 33269] Length = 293 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 96/234 (41%), Positives = 143/234 (61%), Gaps = 2/234 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + G +I Sbjct: 8 QLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAAEALKQIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V + A V +W GGM+TN+ T+ ++++K+ ++++L++ Sbjct: 68 LFVATKKQAKDIVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKLMSDGTFA 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ A+V Sbjct: 128 NLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVMKEAIAVKEANRLGIPVFAMV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 DTNS+P+ VD+VIP NDD+ S+ A +G+ + AD K+A E Sbjct: 188 DTNSDPNNVDFVIPANDDAKDSVDAILTACCQAIAEGL-EERKVEKADEKAASE 240 >gi|209560207|ref|YP_002286679.1| 30S ribosomal protein S2 [Streptococcus pyogenes NZ131] gi|229559897|sp|B5XIY5|RS2_STRPZ RecName: Full=30S ribosomal protein S2 gi|209541408|gb|ACI61984.1| SSU ribosomal protein S2p (SAe) [Streptococcus pyogenes NZ131] Length = 255 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 153/224 (68%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 4 ISMKQLLECGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAAN 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 64 DAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM--- 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E +G KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEG 224 >gi|209573690|sp|Q2S6J0|RS2_SALRD RecName: Full=30S ribosomal protein S2 Length = 320 Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 136/223 (60%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI +LL++G FGH WNP+ME+YIF ERNN HIIDL Q+ +L +A + Sbjct: 83 RVTIEELLKAGAHFGHLTSRWNPRMEKYIFMERNNIHIIDLMQSQVLLDEAAEAAKRFAR 142 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG +ILF TK QA D V E A+ + +WLGG MTN++T+ +SI+++ ++E + Sbjct: 143 RGKKILFAGTKKQAEDIVREHAEECGMPHMVDRWLGGTMTNFQTIRKSIRRMEEIERMDR 202 Query: 125 KENQGFTKKERLNIE-RKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KK+ + R+ +KL+ L GIRDM LP +++VD RE +A+ EA L IP Sbjct: 203 DGTLDKLKKKEKLMRLREHEKLEETLGGIRDMANLPSAIYIVDVQREDIAVSEANNLGIP 262 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I+A+VDTN NP +DY IP NDD+ SI L + A +G+ Sbjct: 263 IIAMVDTNGNPKNIDYPIPVNDDALSSIELVTSTLTDAVQEGL 305 >gi|294505849|ref|YP_003569907.1| 30S ribosomal protein S2 [Salinibacter ruber M8] gi|294342177|emb|CBH22955.1| 30S ribosomal protein S2 [Salinibacter ruber M8] Length = 320 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 136/223 (60%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI +LL++G FGH WNP+ME+YIF ERNN HIIDL Q+ +L +A + Sbjct: 83 RVTIEELLKAGAHFGHLTSRWNPRMEKYIFMERNNIHIIDLMQSQVLLDEAAEAAKRFAR 142 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG +ILF TK QA D V E A+ + +WLGG MTN++T+ +SI+++ ++E + Sbjct: 143 RGKKILFAGTKKQAEDIVREHAEECGMPHMVDRWLGGTMTNFQTIRKSIRRMEEIERMDR 202 Query: 125 KENQGFTKKERLNIE-RKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KK+ + R+ +KL+ L GIRDM LP +++VD RE +A+ EA L IP Sbjct: 203 DGTLDKLKKKEKLMRLREHEKLEETLGGIRDMANLPSAIYIVDVQREDIAVSEANNLGIP 262 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I+A+VDTN NP +DY IP NDD+ SI L + A +G+ Sbjct: 263 IIAMVDTNGNPKNIDYPIPVNDDALSSIELVTSTLTDAVQEGL 305 >gi|261879110|ref|ZP_06005537.1| 30S ribosomal protein S2 [Prevotella bergensis DSM 17361] gi|270334292|gb|EFA45078.1| 30S ribosomal protein S2 [Prevotella bergensis DSM 17361] Length = 288 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 88/221 (39%), Positives = 139/221 (62%), Gaps = 1/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + + G Sbjct: 5 TFDQLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEAMKNLAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 +ILFV+TK Q D + + V +W GG +TN+ T+ ++++K+ ++++L+ + Sbjct: 65 KKILFVSTKKQTKDIIADKVSAINMPYVTERWAGGTLTNFPTIRKAVKKMTNIDKLMADG 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ Sbjct: 125 TFSNLSKREILQINRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVREAHRLGIPVF 184 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+VDTNS+P+ +DYVIP NDD+ S+ + + V +A +G+ Sbjct: 185 AIVDTNSDPNGIDYVIPANDDAKDSVEIILETVCAAIAEGL 225 >gi|71842276|ref|YP_277364.1| ribosomal protein S2 [Emiliania huxleyi] gi|122249156|sp|Q4G3A3|RR2_EMIHU RecName: Full=30S ribosomal protein S2, chloroplastic gi|52547756|gb|AAU81913.1| ribosomal protein S2 [Emiliania huxleyi] gi|60101519|gb|AAX13863.1| ribosomal protein S2 [Emiliania huxleyi] Length = 229 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +LL++GV FGH+ WNPKM YI+ ERN H+IDL QT +L A + + Sbjct: 5 TLGELLDAGVHFGHQASRWNPKMFPYIYAERNGIHVIDLVQTARLLTHAYEFVQKASQEK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 LFV TK QA+ + E A+R + VN++WLGG++TNW TV + ++ L++L+ KE Sbjct: 65 KSFLFVGTKRQAASIIAEEAQRCGGHYVNNRWLGGILTNWSTVQKRVEYLKELDA---KE 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G KKE + R+++KL L G+ +M +PD++ +VD RE A+ E R+L I Sbjct: 122 EDGTLDRLPKKEAAFLRREQEKLSHNLRGLINMTQIPDIVILVDPKRETTALLECRKLGI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 PI++++DTN +P+LVD IP NDD+ RS+ L +A ++G Sbjct: 182 PIISILDTNCDPNLVDIPIPANDDAVRSVKLIISTLADGILEG 224 >gi|11466682|ref|NP_039278.1| ribosomal protein S2 [Marchantia polymorpha] gi|133911|sp|P06354|RR2_MARPO RecName: Full=30S ribosomal protein S2, chloroplastic gi|11651|emb|CAA28064.1| rps2 [Marchantia polymorpha] Length = 235 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 138/222 (62%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH+ WNPKM YIF ER HII+L+QT L +A ++++ ++G Sbjct: 10 LEEMMEAGVHFGHQARKWNPKMAPYIFTERKGIHIINLTQTARFLSEACDLVANASSKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK QA+D + +A ++ + VN KWLGGM+TNW T+ +QK +DLE NK+ Sbjct: 70 QFLIVGTKYQAADLIESSALKARCHYVNQKWLGGMLTNWSTIETRLQKFKDLE---NKKK 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KKE N++R+ D L++ L GI+ M LPD++ ++D +E AIQE L IP Sbjct: 127 TGTINRLPKKEAANLKRQLDHLQKYLGGIKYMTSLPDIVIIIDQQKEFTAIQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDT+ +PD+ D IP NDD+ SI + + A +G Sbjct: 187 TICLVDTDCDPDMTDIPIPANDDARASIRWILNKLTLAICEG 228 >gi|28210947|ref|NP_781891.1| 30S ribosomal protein S2 [Clostridium tetani E88] gi|61215764|sp|Q895L2|RS2_CLOTE RecName: Full=30S ribosomal protein S2 gi|28203386|gb|AAO35828.1| SSU ribosomal protein S2P [Clostridium tetani E88] Length = 233 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 102/225 (45%), Positives = 145/225 (64%), Gaps = 8/225 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + A Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEQAYNFIREVAAE 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++FV TK QA + + E A R + VN++WLGGM+TN+ T+ ++R LEEL Sbjct: 64 GKDVIFVGTKKQAQEAIQEEAVRCDMHFVNNRWLGGMLTNFSTIK---GRIRTLEELEQM 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 E G KKE + ++ + +KL++ L GI+++ MFVVD +EK AI EA+ L Sbjct: 121 EQDGTFEVLPKKEVIKLKLEEEKLEKNLGGIKNLNANNVGAMFVVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G Sbjct: 181 GIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITAKMADAVIEG 225 >gi|282877312|ref|ZP_06286143.1| ribosomal protein S2 [Prevotella buccalis ATCC 35310] gi|281300590|gb|EFA92928.1| ribosomal protein S2 [Prevotella buccalis ATCC 35310] Length = 296 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 137/218 (62%), Gaps = 1/218 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++ Sbjct: 8 QLLQAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQIAKSGRKV 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQ 128 LFVATK QA D V E A VN +W GG +TN+ T+ ++++K+ ++++L+ + + Sbjct: 68 LFVATKKQAKDIVAEKAASVNMPYVNERWAGGTLTNFPTIRKAVKKMTNIDKLMADGTFE 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ A+V Sbjct: 128 NISKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVCKEHIAVKEANRLGIPVFAIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTNS+P +D+VIP NDD+ S+ + A +G+ Sbjct: 188 DTNSDPKNIDFVIPANDDAKDSVEVILTACCQAIAEGL 225 >gi|224536218|ref|ZP_03676757.1| hypothetical protein BACCELL_01085 [Bacteroides cellulosilyticus DSM 14838] gi|224522161|gb|EEF91266.1| hypothetical protein BACCELL_01085 [Bacteroides cellulosilyticus DSM 14838] Length = 278 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 141/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVADKASAVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++SI + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPSNIDFVIPANDDATKSIEVILDACCAAMQEGLEERKAE-KVDMEAAGE 240 >gi|322382360|ref|ZP_08056267.1| 30S ribosomal protein S2-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153713|gb|EFX46088.1| 30S ribosomal protein S2-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 206 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 141/214 (65%), Gaps = 11/214 (5%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M++YIF ERN +IIDL +TV +++A + G ILFV TK QA D V E A+R Sbjct: 1 MDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSLAEENGTILFVGTKKQAQDSVKEEAER 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKL 145 + +N +WLGG +TN++T+ + I +LR+LE++ +E+ F KKE + + +++D+L Sbjct: 61 CGMFYINQRWLGGTLTNFQTIQKRINRLRELEKM--EEDGTFDLLPKKEVILLRKEKDRL 118 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGND 205 ++ L GI+ M GLP +FV+D +E++A+ EAR+L IPIV +VDTN +PD +DYVIPGND Sbjct: 119 EKFLGGIKGMKGLPSALFVIDPRKERIAVAEARKLGIPIVGIVDTNCDPDEIDYVIPGND 178 Query: 206 DSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 D+ R++ L +A A I+ S+ G +T + Sbjct: 179 DAIRAVKLLTAKMADAVIE------SHQGEETTA 206 >gi|83815455|ref|YP_444191.1| ribosomal protein S2 [Salinibacter ruber DSM 13855] gi|83756849|gb|ABC44962.1| ribosomal protein S2 [Salinibacter ruber DSM 13855] Length = 364 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 95/223 (42%), Positives = 136/223 (60%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI +LL++G FGH WNP+ME+YIF ERNN HIIDL Q+ +L +A + Sbjct: 127 RVTIEELLKAGAHFGHLTSRWNPRMEKYIFMERNNIHIIDLMQSQVLLDEAAEAAKRFAR 186 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG +ILF TK QA D V E A+ + +WLGG MTN++T+ +SI+++ ++E + Sbjct: 187 RGKKILFAGTKKQAEDIVREHAEECGMPHMVDRWLGGTMTNFQTIRKSIRRMEEIERMDR 246 Query: 125 KENQGFTKKERLNIE-RKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KK+ + R+ +KL+ L GIRDM LP +++VD RE +A+ EA L IP Sbjct: 247 DGTLDKLKKKEKLMRLREHEKLEETLGGIRDMANLPSAIYIVDVQREDIAVSEANNLGIP 306 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I+A+VDTN NP +DY IP NDD+ SI L + A +G+ Sbjct: 307 IIAMVDTNGNPKNIDYPIPVNDDALSSIELVTSTLTDAVQEGL 349 >gi|218128470|ref|ZP_03457274.1| hypothetical protein BACEGG_00040 [Bacteroides eggerthii DSM 20697] gi|317475705|ref|ZP_07934965.1| ribosomal protein S2 [Bacteroides eggerthii 1_2_48FAA] gi|217989361|gb|EEC55674.1| hypothetical protein BACEGG_00040 [Bacteroides eggerthii DSM 20697] gi|316908161|gb|EFV29855.1| ribosomal protein S2 [Bacteroides eggerthii 1_2_48FAA] Length = 278 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FVVD +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVVDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAE-KVDMEAAGE 240 >gi|261316030|ref|ZP_05955227.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] gi|261305056|gb|EEY08553.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 127 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 82/117 (70%), Positives = 99/117 (84%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 11 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR Sbjct: 71 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLR 127 >gi|189463709|ref|ZP_03012494.1| hypothetical protein BACINT_00042 [Bacteroides intestinalis DSM 17393] gi|189438659|gb|EDV07644.1| hypothetical protein BACINT_00042 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 141/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++SI + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPSNIDFVIPANDDATKSIEVILDACCAAMQEGLEERKAE-KVDMEAAGE 240 >gi|254527117|ref|ZP_05139169.1| ribosomal protein S2 [Prochlorococcus marinus str. MIT 9202] gi|221538541|gb|EEE40994.1| ribosomal protein S2 [Prochlorococcus marinus str. MIT 9202] Length = 234 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + G Sbjct: 5 SLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNDAYKWTRNAAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + E Sbjct: 65 KRFLFVGTKKQASDVVAQEATRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGSIAMRPKKEAAVLRRELERLQKYLGGLKSMRRLPDVVVLVDQRRESNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 SLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEG 224 >gi|161579026|ref|NP_869529.2| 30S ribosomal protein S2 [Rhodopirellula baltica SH 1] gi|115305706|sp|Q7UKH4|RS2_RHOBA RecName: Full=30S ribosomal protein S2 Length = 260 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 142/219 (64%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGHR LWNPKM YIF ++N HI+D+ +T+ L +A + +S A G Sbjct: 6 VKEMIEAGVHFGHRTSLWNPKMAPYIFGKKNQIHILDIRETLRGLLRAKKYLSQVAAGGS 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + V E + R V+ +WLGG +TN++T+ + +L +LE L + Sbjct: 66 LILFVGTKRQAGEAVEEQSLRCGMPFVSERWLGGTLTNFRTIRSRLGRLEELEALRAGDG 125 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK + ++ R+ K+ R L+G+R M LP++MF+VD +E+ A++EA+RL I VA Sbjct: 126 INDYSKKMQSSLNREYRKMYRNLNGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVA 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT+S+P +D IPGNDD RS+ + +A A I G Sbjct: 186 LIDTDSDPSQIDLPIPGNDDGIRSVEMIMRELADAVIAG 224 >gi|123968349|ref|YP_001009207.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. AS9601] gi|126696151|ref|YP_001091037.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9301] gi|157413182|ref|YP_001484048.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9215] gi|166225294|sp|A3PCG1|RS2_PROM0 RecName: Full=30S ribosomal protein S2 gi|166225297|sp|A2BQN9|RS2_PROMS RecName: Full=30S ribosomal protein S2 gi|167011237|sp|A8G4D1|RS2_PROM2 RecName: Full=30S ribosomal protein S2 gi|123198459|gb|ABM70100.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. AS9601] gi|126543194|gb|ABO17436.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9301] gi|157387757|gb|ABV50462.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9215] Length = 234 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + G Sbjct: 5 SLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNAAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + E Sbjct: 65 KRFLFVGTKKQASDVVAQEATRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGSIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRESNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 SLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEG 224 >gi|167765411|ref|ZP_02437524.1| hypothetical protein BACSTE_03799 [Bacteroides stercoris ATCC 43183] gi|329957318|ref|ZP_08297838.1| ribosomal protein S2 [Bacteroides clarus YIT 12056] gi|167697039|gb|EDS13618.1| hypothetical protein BACSTE_03799 [Bacteroides stercoris ATCC 43183] gi|328523031|gb|EGF50134.1| ribosomal protein S2 [Bacteroides clarus YIT 12056] Length = 278 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 142/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAE-KVDMEAAGE 240 >gi|159903551|ref|YP_001550895.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9211] gi|238687107|sp|A9BAS9|RS2_PROM4 RecName: Full=30S ribosomal protein S2 gi|159888727|gb|ABX08941.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9211] Length = 238 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 136/223 (60%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL +T + A + + G Sbjct: 5 TLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVKTAVCMNSAYKWTRNAAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVALEANRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + + ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEASVLRHELERLQKYLGGLKGMKRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 PLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEG 224 >gi|15618606|ref|NP_224892.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae CWL029] gi|15836228|ref|NP_300752.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae J138] gi|16752344|ref|NP_444602.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae AR39] gi|33242054|ref|NP_876995.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae TW-183] gi|6707743|sp|Q9Z7K9|RS2_CHLPN RecName: Full=30S ribosomal protein S2 gi|4376999|gb|AAD18835.1| S2 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|7188989|gb|AAF37943.1| ribosomal protein S2 [Chlamydophila pneumoniae AR39] gi|8979068|dbj|BAA98903.1| S2 ribosomal protein [Chlamydophila pneumoniae J138] gi|33236564|gb|AAP98652.1| ribosomal protein S2 [Chlamydophila pneumoniae TW-183] Length = 277 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 91/221 (41%), Positives = 140/221 (63%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI+ L+ +G FGH+ WNPKM+ YIF E+N +II+L++T+ L+ AL I + Sbjct: 7 KLTIKDLMSAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLQQLRNALPHIRKVIQ 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +LFV TK QA + EAA + ++ + +WLGGM+TN T+ SI+ L +E+ L+ Sbjct: 67 DNKTVLFVGTKKQAKCVIREAAIEAGEFFIAERWLGGMLTNMTTIRNSIKTLDKIEKDLS 126 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE + ++ KL R L+GIR M P L+ VVD + EK+A+ EA++L IP+ Sbjct: 127 RNQAYLTKKEAALLAKRHQKLLRNLEGIRYMKKAPGLLVVVDPSYEKIAVAEAKKLGIPV 186 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +A+VDTN +P +D+VIP NDDS +SI L +++ I+ Sbjct: 187 LALVDTNCDPTPIDHVIPCNDDSLKSIRLIINVIKENIIEA 227 >gi|254708528|ref|ZP_05170356.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 117 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 82/117 (70%), Positives = 99/117 (84%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLR 117 >gi|123966064|ref|YP_001011145.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9515] gi|166225296|sp|A2BW77|RS2_PROM5 RecName: Full=30S ribosomal protein S2 gi|123200430|gb|ABM72038.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9515] Length = 234 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + G Sbjct: 5 SLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNAAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + E Sbjct: 65 KRFLFVGTKKQASDVVAQEAVRCGAAYVNQRWLGGMLTNWSTMKARIERLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRESNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 SLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEG 224 >gi|325110869|ref|YP_004271937.1| 30S ribosomal protein S2P [Planctomyces brasiliensis DSM 5305] gi|324971137|gb|ADY61915.1| SSU ribosomal protein S2P [Planctomyces brasiliensis DSM 5305] Length = 249 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/252 (39%), Positives = 148/252 (58%), Gaps = 17/252 (6%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +L++GV FGH++ WNPKM YI+ RN HIIDL +TV L +A + + ++ Sbjct: 4 INVKDILDAGVHFGHQSSRWNPKMRPYIYGRRNRIHIIDLKETVRGLIRAQRYLQKVSSQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA+ + E A+ V+ +WLGGM+TN++T+ I++L +LE L Sbjct: 64 GSLILFVGTKRQAAGTIRECAQACGMPYVSERWLGGMLTNYRTIRNRIKRLEELEGLQES 123 Query: 126 ENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F+KK + + R+ K+ R L GIRD+ LP+ + V+D +E A++EA L I + Sbjct: 124 GQMATFSKKAQSKLMREYRKINRNLGGIRDLNRLPEAIVVIDPTKEHNAVKEAHILGIKV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA++DT+S+PD VD IPGNDDS RSI L +A A +AG++ Sbjct: 184 VALIDTDSDPDEVDLPIPGNDDSMRSIRLIVSHLADAV----------------AAGKST 227 Query: 245 VHSKEGMQLEED 256 V KE Q +ED Sbjct: 228 VPQKEDAQQQED 239 >gi|78779145|ref|YP_397257.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9312] gi|123741472|sp|Q31BC4|RS2_PROM9 RecName: Full=30S ribosomal protein S2 gi|78712644|gb|ABB49821.1| SSU ribosomal protein S2P [Prochlorococcus marinus str. MIT 9312] Length = 233 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + G Sbjct: 5 SLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNAAKGG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + E Sbjct: 65 KRFLFVGTKKQASDVVAQEATRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGSIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 SLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEG 224 >gi|33861310|ref|NP_892871.1| 30S ribosomal protein S2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|61215697|sp|Q7V1V0|RS2_PROMP RecName: Full=30S ribosomal protein S2 gi|33633887|emb|CAE19212.1| 30S ribosomal protein S2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 234 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 138/223 (61%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + G Sbjct: 5 SLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNAAKSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + E Sbjct: 65 KRFLFVGTKKQASDVVAQEAVRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRESNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 SLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEG 224 >gi|319900033|ref|YP_004159761.1| SSU ribosomal protein S2P [Bacteroides helcogenes P 36-108] gi|319415064|gb|ADV42175.1| SSU ribosomal protein S2P [Bacteroides helcogenes P 36-108] Length = 278 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 142/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L N Sbjct: 69 FVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +F++D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFIIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAE-KVDMEAAGE 240 >gi|294155606|ref|YP_003559990.1| 30S ribosomal protein S2 [Mycoplasma crocodyli MP145] gi|291600062|gb|ADE19558.1| 30S ribosomal protein S2 [Mycoplasma crocodyli MP145] Length = 316 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 87/216 (40%), Positives = 139/216 (64%), Gaps = 2/216 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNN--THIIDLSQTVPMLQKALQVISDTVARGG 67 +LLE+G FGH+ WNPKM+ YI + N HIID+S+T L+ A +I+ A+ Sbjct: 33 KLLEAGAYFGHKVHQWNPKMKEYIVPGKTNRGAHIIDISKTQKYLEFAYSLINKFAAKKA 92 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +FV TK QA + EAA+R+ + V +WLGG +TN +T+ ++ + LE Sbjct: 93 SFIFVGTKKQAHAAIKEAAERTQSFYVTERWLGGTLTNNQTIMSRVKAMEILEAKAASGF 152 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G+TKKE + +++ DKL + L+GIR+M +P +M V D N +++A++EAR+ I ++ + Sbjct: 153 KGYTKKEAIIFQKELDKLHKNLEGIRNMKHIPQVMIVADPNEDEIAVKEARKKGIKVIGI 212 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +D+N+NPD VD+ IP NDDSS+SI+L ++A A + Sbjct: 213 LDSNANPDSVDFGIPANDDSSKSISLIITILADAIV 248 >gi|313157473|gb|EFR56892.1| ribosomal protein S2 [Alistipes sp. HGB5] Length = 313 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 94/217 (43%), Positives = 137/217 (63%), Gaps = 3/217 (1%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNPKM YIF E+N HIIDL +TV + +A I G R+L Sbjct: 9 LLEAGAHFGHLKRKWNPKMAPYIFMEKNGIHIIDLHKTVLKIDEAAAAIKQIAKSGRRVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ-- 128 FVATK QA + V E V +W GGM+TN+ T+ ++++K+ +++ +N + Sbjct: 69 FVATKKQAKEIVAEKVAAVGMPYVTERWAGGMLTNFPTIRKAVKKMSTIDK-MNSDGTFD 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 F+K+E+L I R+R KL++ L I D+ LP +FVVD +E A++EA+RL IP+ A+V Sbjct: 128 NFSKREKLQIARQRAKLEKNLGSIADLTRLPAALFVVDVQKESNAVKEAKRLSIPVFAMV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 DT +P +DYVIP NDD+++SIA+ D + SA +G Sbjct: 188 DTCCDPTDIDYVIPANDDATKSIAVVLDAMCSAIAEG 224 >gi|182416306|ref|YP_001821372.1| ribosomal protein S2 [Opitutus terrae PB90-1] gi|209573673|sp|B1ZQ51|RS2_OPITP RecName: Full=30S ribosomal protein S2 gi|177843520|gb|ACB77772.1| ribosomal protein S2 [Opitutus terrae PB90-1] Length = 302 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 91/224 (40%), Positives = 140/224 (62%), Gaps = 3/224 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T + LL++GV FGH+ WNP+ + ++F R IIDL +T L+KA + DTV G Sbjct: 4 TPKDLLDAGVHFGHQTKRWNPRSKPFVFDHRQGISIIDLGKTHAALEKACTFLEDTVGNG 63 Query: 67 GRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +LFV TK QA D + EAA + +CV+ +WLGG +TN++TV +SI K + +++ + Sbjct: 64 GNVLFVGTKRQAKDIIREAATSTNMPFCVD-RWLGGTLTNYETVKRSIAKYKKYQQMETS 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KE I+R+ ++++ GI DM GLP MFVVD N EK+A+ EA R IP Sbjct: 123 GDMNKLASKEVAAIKREMVRMQKNFSGIVDMPGLPTAMFVVDVNHEKIAVAEAARSGIPC 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 V + DTNS+P + + IPGNDD+ +SI + + + +A +G+++ Sbjct: 183 VGICDTNSDPSTLSHPIPGNDDAVKSIRIIVEAIVAAVQNGLSQ 226 >gi|224178094|ref|YP_002600951.1| ribosomal protein S2 [Pyramimonas parkeae] gi|215882761|gb|ACJ71134.1| ribosomal protein S2 [Pyramimonas parkeae] Length = 225 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 138/224 (61%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ Q+L++GV FGH+ WNPKME +I+ ERN HIID+ QT+ ++K + ++ + Sbjct: 2 ITLEQMLDAGVHFGHQVRRWNPKMEPFIYGERNGIHIIDIVQTLSCIEKISEFLTQEKKK 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA+ + AA S + VN +WLGGM+TNW T+ I+KLR +E+L Sbjct: 62 GKTILFVGTKRQAAPVIQTAAINSNSHYVNQRWLGGMLTNWATMKTCIEKLRKIEKL--- 118 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE ++++R+KL++ G++ M LPD++ +V RE A++E +L Sbjct: 119 EETGVLNSLPKKELALLKKRREKLEKYFGGVKTMPNLPDIVILVGQPRETNAVKECNKLG 178 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I + ++DTN +PDL D+ IP NDDS RS+ L + A G Sbjct: 179 IRTITILDTNCDPDLADFFIPANDDSIRSVELVLGELTEAIKKG 222 >gi|269302483|gb|ACZ32583.1| ribosomal protein S2 [Chlamydophila pneumoniae LPCoLN] Length = 277 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 91/221 (41%), Positives = 140/221 (63%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI+ L+ +G FGH+ W+PKM+ YIF E+N +II+L++T+ L+ AL I + Sbjct: 7 KLTIKDLMSAGAHFGHQTRRWHPKMKLYIFEEKNGLYIINLAKTLQQLRNALPHIRKVIQ 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +LFV TK QA + EAA + ++ V +WLGGM+TN T+ SI+ L +E+ L+ Sbjct: 67 DNKTVLFVGTKKQAKCVIREAAIEAGEFFVAERWLGGMLTNMTTIRNSIKTLDKIEKDLS 126 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE + ++ KL R L+GIR M P L+ VVD + EK+A+ EA++L IP+ Sbjct: 127 RNQAYLTKKEAALLAKRHQKLLRNLEGIRYMKKAPGLLVVVDPSYEKIAVAEAKKLGIPV 186 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +A+VDTN +P +D+VIP NDDS +SI L +++ I+ Sbjct: 187 LALVDTNCDPTPIDHVIPCNDDSLKSIRLIINVIKENIIEA 227 >gi|269115275|ref|YP_003303038.1| 30S ribosomal protein S2 [Mycoplasma hominis] gi|268322900|emb|CAX37635.1| 30S ribosomal protein S2 [Mycoplasma hominis ATCC 23114] Length = 299 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 94/224 (41%), Positives = 143/224 (63%), Gaps = 7/224 (3%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LLE+G FGHR WNPKM++YI+ +R HIID+++T L+ A ++++ + Sbjct: 26 KLLEAGTYFGHRVSQWNPKMKQYIWGKRMGIHIIDIAKTQKTLEYAYKLLNKMAQKPISF 85 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 ++V TK QA + AA R+ V+ +WLGG +TN +T+ +S+++L LEEL E QG Sbjct: 86 IWVGTKKQAKKAIESAAARTNSVYVSERWLGGTLTNSQTIFRSVRELERLEELQKSEYQG 145 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGG---LPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +TKKE L +++K KL++ L GIR + G +P +M +++AI+EA++ + I A Sbjct: 146 YTKKEGLLMDKKIAKLQKNLGGIRKLAGKAAMPQVMICASPIDDEIAIREAKKKGLKIFA 205 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 + DTNSNPDLVD+VIP NDDS +SI L ++A D IA H Sbjct: 206 IQDTNSNPDLVDFVIPANDDSVKSITLITTILA----DAIASAH 245 >gi|225165558|ref|ZP_03727376.1| ribosomal protein S2 [Opitutaceae bacterium TAV2] gi|224800196|gb|EEG18608.1| ribosomal protein S2 [Opitutaceae bacterium TAV2] Length = 302 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 97/231 (41%), Positives = 139/231 (60%), Gaps = 3/231 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T + LL++GV FGH+ WNP+ + Y+F R IIDL +T +LQKA I DTVA G Sbjct: 4 TPKDLLDAGVHFGHQTKRWNPRSKPYVFDHRQGITIIDLGKTYDLLQKAYTYIEDTVANG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +LFV TK QA + + EAA + YCV+ +WLGG +TN+ TV +SI K + + L + Sbjct: 64 GNVLFVGTKKQAQEILREAATSTGMPYCVD-RWLGGTLTNFATVKRSIAKFKKFQALETS 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + KE I+R+ ++ + GI DM LP MFVVD N E +A+ EA R I Sbjct: 123 GEINKLSAKEGAAIKREMVRMNKNFAGIVDMPELPSAMFVVDANHEDIAVAEAARCGIAC 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + +VDTNS+P + + IPGNDD+ +SI + D + +A G+ ++ S A Sbjct: 183 IGLVDTNSDPTKLSHPIPGNDDAVKSIRIIVDTIVAAIQSGLGQRDSRRAA 233 >gi|327541525|gb|EGF28059.1| 30S ribosomal protein S2 [Rhodopirellula baltica WH47] Length = 396 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 142/219 (64%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGHR LWNPKM YIF ++N HI+D+ +T+ L +A + +S A G Sbjct: 142 VKEMIEAGVHFGHRTSLWNPKMAPYIFGKKNQIHILDIRETLRGLLRAKKYLSQVAAGGS 201 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + V E + R V+ +WLGG +TN++T+ + +L +LE L + Sbjct: 202 LILFVGTKRQAGEAVEEQSLRCGMPFVSERWLGGTLTNFRTIRSRLGRLEELEALRAGDG 261 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK + ++ R+ K+ R L+G+R M LP++MF+VD +E+ A++EA+RL I VA Sbjct: 262 INDYSKKMQSSLNREYRKMYRNLNGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVA 321 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT+S+P +D IPGNDD RS+ + +A A I G Sbjct: 322 LIDTDSDPSQIDLPIPGNDDGIRSVEMIMRELADAVIAG 360 >gi|32447081|emb|CAD76890.1| ribosomal protein S2 [Rhodopirellula baltica SH 1] Length = 396 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 142/219 (64%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGHR LWNPKM YIF ++N HI+D+ +T+ L +A + +S A G Sbjct: 142 VKEMIEAGVHFGHRTSLWNPKMAPYIFGKKNQIHILDIRETLRGLLRAKKYLSQVAAGGS 201 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + V E + R V+ +WLGG +TN++T+ + +L +LE L + Sbjct: 202 LILFVGTKRQAGEAVEEQSLRCGMPFVSERWLGGTLTNFRTIRSRLGRLEELEALRAGDG 261 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK + ++ R+ K+ R L+G+R M LP++MF+VD +E+ A++EA+RL I VA Sbjct: 262 INDYSKKMQSSLNREYRKMYRNLNGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVA 321 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT+S+P +D IPGNDD RS+ + +A A I G Sbjct: 322 LIDTDSDPSQIDLPIPGNDDGIRSVEMIMRELADAVIAG 360 >gi|260780675|ref|YP_003227037.1| 30S ribosomal protein S2 [Bryopsis hypnoides] gi|260176753|gb|ACX33762.1| 30S ribosomal protein S2 [Bryopsis hypnoides] Length = 266 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 88/221 (39%), Positives = 142/221 (64%), Gaps = 2/221 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++++E+GV FGH WNPKM YI+ E+N HIID+ QT L+K + + + ++G Sbjct: 4 TLQKMIEAGVHFGHPKDQWNPKMLPYIYKEKNGIHIIDIVQTWFYLKKISKFLEEACSQG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK QAS + A S + VN +WLGG++TNW T+ +SI KL LE+ N + Sbjct: 64 KQILFVGTKKQASKIIESTAVDSNSFFVNERWLGGLLTNWSTIQKSILKLNSLEKYENFQ 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 N F+KKE++ +E+++ +L++ + G++ M LPD++ ++ +E A++E ++L I + Sbjct: 124 N--FSKKEKVKLEKQKQRLEKYIGGLKTMKQLPDIVIIIGQQKELNAVKECQKLGIRTIT 181 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++DTN NP L D IP NDDS SI L +A + +G + Sbjct: 182 LLDTNCNPLLADLFIPANDDSIASIKLIITELAKSIKNGYS 222 >gi|269101095|ref|YP_003289243.1| 30S ribosomal protein S2 [Ectocarpus siliculosus] gi|266631603|emb|CAV31274.1| Chloroplast 30S ribosomal protein S2 [Ectocarpus siliculosus] gi|270118733|emb|CAT18813.1| Chloroplast 30S ribosomal protein S2 [Ectocarpus siliculosus] Length = 231 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 90/226 (39%), Positives = 138/226 (61%), Gaps = 5/226 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + QLL++GV FGH+ WNPKM YI+ ERN HI+DL QT L++A Sbjct: 1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ LFV TK QA+ + A++ + +N +WLGGM+TNW T+ I +L LEE Sbjct: 61 SAKKQTFLFVGTKKQAASLIALEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNALEE- 119 Query: 123 LNKENQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ F+ KKE N++++ +KL++ +G++ M +PD++ ++D RE +AI+EA Sbjct: 120 -QEKINSFSNLPKKEAANLKKELEKLQKYFNGVKGMKKVPDILVIIDQKREIIAIKEALS 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IPI++++DTN +PDL IPGNDDS RSI +A + G Sbjct: 179 LDIPIISILDTNCDPDLATIPIPGNDDSIRSIKYIIQNIADSICLG 224 >gi|296123429|ref|YP_003631207.1| ribosomal protein S2 [Planctomyces limnophilus DSM 3776] gi|296015769|gb|ADG69008.1| ribosomal protein S2 [Planctomyces limnophilus DSM 3776] Length = 247 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 139/221 (62%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ LE+G+ +GHR WNPKM YI+ RN HIID+ +TV L +A + + ++ Sbjct: 4 IVVKDFLEAGIHYGHRTSRWNPKMRPYIYGRRNLIHIIDIKETVRGLLRAKRYLQKVASQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF TK QASD + E A ++ V+ +WLGG+ TN++T+ I++L +L++L Sbjct: 64 GSLILFCGTKKQASDAIREYANQAGMPFVDYRWLGGVFTNFRTIRGRIKRLEELDQLFES 123 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + ++KK R + R+R K+ R LDG+R+M LP+ M +VD +E A+ EA+ + I Sbjct: 124 GEIETYSKKRRSTLLRERTKMTRNLDGLRNMNRLPEAMVIVDPRKEHNALHEAKLVGIKT 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +A++DT+ +PD VD IPGNDDS RSI L + + ++G Sbjct: 184 IALLDTDCDPDQVDLPIPGNDDSIRSIQLVLQHLTESILEG 224 >gi|229915542|gb|ACQ90886.1| ribosomal protein S2 [Pedinomonas minor] Length = 257 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 97/243 (39%), Positives = 144/243 (59%), Gaps = 5/243 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+ Q++++G+ FGH++ WNPKM YI+ ERN H+IDL QT L++ ++D + Sbjct: 2 QLTLEQMVKAGMHFGHQSRKWNPKMAPYIYGERNGIHLIDLVQTFTKLKEVKAFLADQAS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G LFV TK+QA+ V +AA + + VN +WLGGM+TNWKT+ S+ L LE+L Sbjct: 62 QGKTFLFVGTKNQAARLVSKAAIEANSFFVNHRWLGGMLTNWKTIRTSLANLDRLEQL-- 119 Query: 125 KENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +E+ GF KKE N+++ +++L R L G++ M +PD++ ++ E A+ E RL Sbjct: 120 EESGGFEQLPKKEAANLKKVKERLTRYLGGLKGMSRIPDVVIIIGQPDEITAVYECNRLG 179 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 I V V+DT+ +P L D V+P NDDS SI L S+ DG GA K A Sbjct: 180 IRTVTVLDTDCDPSLADMVVPANDDSVASIQLLLQEFVSSIQDGKREWQEKGGAQKKFAK 239 Query: 242 ETV 244 V Sbjct: 240 RKV 242 >gi|160890598|ref|ZP_02071601.1| hypothetical protein BACUNI_03043 [Bacteroides uniformis ATCC 8492] gi|270295733|ref|ZP_06201933.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479863|ref|ZP_07938981.1| ribosomal protein S2 [Bacteroides sp. 4_1_36] gi|156859597|gb|EDO53028.1| hypothetical protein BACUNI_03043 [Bacteroides uniformis ATCC 8492] gi|270273137|gb|EFA18999.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316903972|gb|EFV25808.1| ribosomal protein S2 [Bacteroides sp. 4_1_36] Length = 277 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 142/233 (60%), Gaps = 2/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + G ++L Sbjct: 9 LLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L + Sbjct: 69 FVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTSDGTYSN 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL IP+ +VD Sbjct: 129 LSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AGE Sbjct: 189 TNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAE-KVDMEAAGE 240 >gi|215400711|ref|YP_002327472.1| ribosomal protein S2 [Vaucheria litorea] gi|194441161|gb|ACF70889.1| ribosomal protein S2 [Vaucheria litorea] Length = 236 Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 93/235 (39%), Positives = 141/235 (60%), Gaps = 10/235 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +LL +GV FGH+ WNPKM YI+ E++ HIIDL QT +L++A + G Sbjct: 6 LSELLAAGVHFGHKAHHWNPKMSPYIYTEKDGVHIIDLIQTSVLLKQACNFVQTASQTGK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 LFV TK QA+ + + A+R + VN +WLGGM+TNW T IQ+L+DLE N++ Sbjct: 66 SFLFVGTKRQAAPVIAKEAQRCGAHYVNYRWLGGMLTNWITFRTRIQRLKDLE---NQQQ 122 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 QG KKE + ++ ++L++ G++ M PD++ ++D E +AI+EA L P Sbjct: 123 QGEIDNLPKKEAAKLTKELERLRKYFTGVKTMTKEPDIIVIIDQKIEIIAIKEALALNKP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 I++++DTN NPDLV IPGNDD+ +SI + +A + +G Q +Y TK Sbjct: 183 IISILDTNCNPDLVTLPIPGNDDAVQSIKYIIEKLAESISNG---QINYRNNKTK 234 >gi|108773266|ref|YP_635714.1| ribosomal protein S2 [Chara vulgaris] gi|77157922|gb|ABA61963.1| ribosomal protein S2 [Chara vulgaris] Length = 241 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 139/222 (62%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH++ WNP+M YIF ER HIIDL QT +L +A +++ + Sbjct: 21 LEEMLEAGVHFGHQSHKWNPRMAPYIFSERKGVHIIDLIQTSNLLHEACDFLANAASNKK 80 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V TK QASD + A +S + VN +WLGGM+TNW T+ IQ+L++LE +E Sbjct: 81 EFLLVGTKFQASDLIKSEALKSRCHYVNQRWLGGMLTNWMTIETRIQRLKNLE---TQEK 137 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KK+ +++R+ ++L++ L G++ M LPD++ +VD +E +A+QE R L IP Sbjct: 138 LGAFHHLPKKDAAHLKRQLNQLQKYLGGMKYMKNLPDVVIIVDQQKEIIAVQECRVLGIP 197 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+A+VDTN +P++VD IP NDD+ SI + +A D Sbjct: 198 IIALVDTNCDPEIVDIPIPANDDARSSIRWILSKLTAAIRDN 239 >gi|228017001|gb|ACP51824.1| ribosomal protein S2 [Pinus canariensis] gi|228017442|gb|ACP52258.1| ribosomal protein S2 [Pinus merkusii] gi|228017693|gb|ACP52505.1| ribosomal protein S2 [Pinus pinaster] Length = 234 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 135/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL E+ + Sbjct: 70 QFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI L + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRA 230 >gi|89889406|ref|ZP_01200917.1| ribosomal protein S2 (rpsB) [Flavobacteria bacterium BBFL7] gi|89517679|gb|EAS20335.1| ribosomal protein S2 (rpsB) [Flavobacteria bacterium BBFL7] Length = 266 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 141/221 (63%), Gaps = 3/221 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LL++GV FGH W+P M YI+ ERN HII+L +T L +A + + A G Sbjct: 7 VKNLLDAGVHFGHLTRKWDPNMAPYIYMERNGIHIINLYKTKAKLDEANEALRKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFVATK QA D V + A + + +W GGM+TN+ T+ ++++K+ L + + K+ Sbjct: 67 KILFVATKKQAKDIVAQHAGDANMPYITERWPGGMLTNFVTIRKAVKKMA-LVDRMKKDG 125 Query: 128 --QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKERL ++R R KL++ L I DM +P +F+VDT RE +A++EA +L IPI Sbjct: 126 RYETLSKKERLQVDRMRAKLEKNLGSIVDMTRMPAALFIVDTVREHIAVKEALKLGIPIF 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 A+ DTN+NP +DYVIP NDD+S+SI + + A A G+ Sbjct: 186 AMADTNANPRDIDYVIPSNDDASKSIDIIVNSAAEAIKAGL 226 >gi|7524612|ref|NP_042366.1| ribosomal protein S2 [Pinus thunbergii] gi|1173241|sp|P41605|RR2_PINTH RecName: Full=30S ribosomal protein S2, chloroplastic gi|1262606|dbj|BAA04324.1| ribosomal protein S2 [Pinus thunbergii] gi|228016371|gb|ACP51204.1| ribosomal protein S2 [Pinus thunbergii] Length = 234 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 135/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL E+ + Sbjct: 70 QFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI L + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRA 230 >gi|313678644|ref|YP_004056384.1| 30S ribosomal protein [Mycoplasma bovis PG45] gi|312950194|gb|ADR24789.1| 30S ribosomal protein [Mycoplasma bovis PG45] Length = 317 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 90/232 (38%), Positives = 145/232 (62%), Gaps = 5/232 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +LLE+G FGH+ +WNPKM+ +++ + + H+I+ + T+ L+ A +++ VA+ R Sbjct: 40 KLLEAGTYFGHKKSMWNPKMKEFLYPQSKRGMHMINTNVTLQRLEFAYNILNKFVAKNPR 99 Query: 69 --ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV TK QA D + E A R+ + V+ +WLGG +TN T+ + ++ + +LE K+ Sbjct: 100 TTFIFVGTKKQAKDTIKENALRTGSFYVSERWLGGTLTNASTIFKRVKVMEELESQAAKK 159 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 QG+TKKE L +++ DKL + LDGIR M LP M V D N + +A++EAR + ++ Sbjct: 160 FQGYTKKEGLIKQKELDKLHKNLDGIRKMQSLPSFMIVADPNVDAIAVKEARSKGVKVIG 219 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS--AAIDGIARQHSYMGAD 236 ++D+NSNPD VD+ IP NDDS++SI L ++A A G + +Y G D Sbjct: 220 ILDSNSNPDAVDFGIPANDDSAKSITLIMTILADAIATARGGKAKFAYQGDD 271 >gi|125987742|sp|Q1ACN3|RR2_CHAVU RecName: Full=30S ribosomal protein S2, chloroplastic Length = 230 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 139/222 (62%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH++ WNP+M YIF ER HIIDL QT +L +A +++ + Sbjct: 10 LEEMLEAGVHFGHQSHKWNPRMAPYIFSERKGVHIIDLIQTSNLLHEACDFLANAASNKK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V TK QASD + A +S + VN +WLGGM+TNW T+ IQ+L++LE +E Sbjct: 70 EFLLVGTKFQASDLIKSEALKSRCHYVNQRWLGGMLTNWMTIETRIQRLKNLE---TQEK 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G KK+ +++R+ ++L++ L G++ M LPD++ +VD +E +A+QE R L IP Sbjct: 127 LGAFHHLPKKDAAHLKRQLNQLQKYLGGMKYMKNLPDVVIIVDQQKEIIAVQECRVLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+A+VDTN +P++VD IP NDD+ SI + +A D Sbjct: 187 IIALVDTNCDPEIVDIPIPANDDARSSIRWILSKLTAAIRDN 228 >gi|237688585|ref|YP_002905202.1| ribosomal protein S2 [Pinus gerardiana] gi|237688653|ref|YP_002905269.1| ribosomal protein S2 [Pinus krempfii] gi|324986352|ref|YP_004276224.1| ribosomal protein S2 [Pinus lambertiana] gi|209573763|sp|Q85X64|RR2_PINKO RecName: Full=30S ribosomal protein S2, chloroplastic gi|226876046|gb|ACO89302.1| ribosomal protein S2 [Pinus gerardiana] gi|226951111|gb|ACO94174.1| ribosomal protein S2 [Pinus krempfii] gi|228016119|gb|ACP50956.1| ribosomal protein S2 [Pinus sibirica] gi|228016176|gb|ACP51012.1| ribosomal protein S2 [Pinus squamata] gi|228016241|gb|ACP51076.1| ribosomal protein S2 [Pinus strobus] gi|228016617|gb|ACP51446.1| ribosomal protein S2 [Pinus albicaulis] gi|228016750|gb|ACP51577.1| ribosomal protein S2 [Pinus armandii] gi|228016873|gb|ACP51698.1| ribosomal protein S2 [Pinus ayacahuite] gi|228017120|gb|ACP51941.1| ribosomal protein S2 [Pinus cembra] gi|228017241|gb|ACP52060.1| ribosomal protein S2 [Pinus flexilis] gi|228017307|gb|ACP52125.1| ribosomal protein S2 [Pinus lambertiana] gi|228017500|gb|ACP52315.1| ribosomal protein S2 [Pinus monticola] gi|228017563|gb|ACP52377.1| ribosomal protein S2 [Pinus parviflora var. pentaphylla] gi|228017627|gb|ACP52440.1| ribosomal protein S2 [Pinus peuce] gi|257042524|gb|ACV32798.1| ribosomal protein S2 [Pinus monticola] gi|257042553|gb|ACV32826.1| ribosomal protein S2 [Pinus monticola] gi|257042581|gb|ACV32853.1| ribosomal protein S2 [Pinus monticola] gi|257042611|gb|ACV32882.1| ribosomal protein S2 [Pinus monticola] gi|257042639|gb|ACV32909.1| ribosomal protein S2 [Pinus monticola] gi|257042667|gb|ACV32936.1| ribosomal protein S2 [Pinus monticola] gi|257042696|gb|ACV32964.1| ribosomal protein S2 [Pinus monticola] gi|257042724|gb|ACV32991.1| ribosomal protein S2 [Pinus monticola] gi|257042751|gb|ACV33017.1| ribosomal protein S2 [Pinus monticola] gi|257042779|gb|ACV33044.1| ribosomal protein S2 [Pinus monticola] gi|323514201|gb|ADX89748.1| ribosomal protein S2 [Pinus lambertiana] Length = 234 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 135/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL E+ + Sbjct: 70 QFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI L + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRA 230 >gi|237688516|ref|YP_002905134.1| ribosomal protein S2 [Pinus contorta] gi|226875345|gb|ACO89083.1| ribosomal protein S2 [Pinus contorta] gi|228015918|gb|ACP50758.1| ribosomal protein S2 [Pinus ponderosa] gi|228016438|gb|ACP51270.1| ribosomal protein S2 [Pinus torreyana subsp. insularis] gi|228016502|gb|ACP51333.1| ribosomal protein S2 [Pinus torreyana subsp. torreyana] gi|228016937|gb|ACP51761.1| ribosomal protein S2 [Pinus banksiana] Length = 234 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 134/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + VN KWLGGM+TNW T +QK +DL E+ + Sbjct: 70 QFLIVGTKYQATDLVASAATEGRCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI L + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRA 230 >gi|145408421|ref|NP_817151.2| ribosomal protein S2 [Pinus koraiensis] gi|145048674|gb|AAO73999.2| ribosomal protein S2 [Pinus koraiensis] Length = 249 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 135/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 25 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAGRGK 84 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL E+ + Sbjct: 85 QFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQDTGR 144 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 145 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIPTI 203 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI L + + SA +G A Sbjct: 204 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRA 245 >gi|255522580|ref|ZP_05389817.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J1-175] Length = 187 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 84/187 (44%), Positives = 130/187 (69%), Gaps = 1/187 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E + Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVV 188 IPI+ +V Sbjct: 181 IPIIGIV 187 >gi|293977813|ref|YP_003543243.1| 30S ribosomal protein S2P [Candidatus Sulcia muelleri DMIN] gi|292667744|gb|ADE35379.1| SSU ribosomal protein S2P [Candidatus Sulcia muelleri DMIN] Length = 220 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 138/219 (63%), Gaps = 1/219 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + I + ++ G FGH WNP M +YIF ++ HIID+S+T+ + +A + I + V+ Sbjct: 2 YNIEKFIKVGAHFGHTTSKWNPNMRKYIFMKKGGIHIIDISKTIKKINEACKFIKNIVSS 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G +ILFVATK QA D V + AK+ + +WLGG++TN T+ QS++K+ ++ + ++ Sbjct: 62 GKKILFVATKKQAKDIVSDYAKKVNMPYITERWLGGILTNMSTIRQSVKKMNVIDRQKID 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE+L I+R ++KLK+ + I M LP + +VD +EK+A++E L IPI Sbjct: 122 GTYNMMSKKEKLLIDRLKNKLKKNIGSISKMNSLPACVIIVDVKKEKIAVKECINLCIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + +VDTN +P +DY IP NDDSS+SI L + ++ + Sbjct: 182 IGIVDTNCDPRNIDYPIPANDDSSKSIHLIISYLTNSIL 220 >gi|161612587|ref|YP_001586552.1| hypothetical protein SPAB_00278 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161361951|gb|ABX65719.1| hypothetical protein SPAB_00278 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 193 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 90/176 (51%), Positives = 125/176 (71%), Gaps = 1/176 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M +AL ++ AR G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV Sbjct: 1 MFNEALAELNKISARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVR 60 Query: 111 QSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 QSI++L+DLE + + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + Sbjct: 61 QSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADH 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 121 EHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 176 >gi|94502273|ref|ZP_01308755.1| ribosomal protein S2 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833703|ref|YP_001597899.1| 30S ribosomal subunit protein S2 [Candidatus Sulcia muelleri GWSS] gi|209573682|sp|A8Z5V2|RS2_SULMW RecName: Full=30S ribosomal protein S2 gi|94451166|gb|EAT14109.1| ribosomal protein S2 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206193|gb|ABS30503.1| 30S ribosomal subunit protein S2 [Candidatus Sulcia muelleri GWSS] Length = 222 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 138/219 (63%), Gaps = 1/219 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + I + ++ G FGH WNP M +YIF ++ HIID+S+T+ + +A + I + V+ Sbjct: 2 YNIEKFIKVGAHFGHTTSKWNPNMRKYIFMKKGGIHIIDISKTIKKINEACKFIKNIVSS 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G +ILFVATK QA D V + AK+ + +WLGG++TN T+ QS++K+ ++ + ++ Sbjct: 62 GKKILFVATKKQAKDIVSDYAKKVNMPYITERWLGGILTNMSTIRQSVKKMNVIDRQKID 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE+L I+R ++KLK+ + I M LP + +VD +EK+A++E L IPI Sbjct: 122 GTYNMMSKKEKLLIDRLKNKLKKNIGSISKMNSLPACVIIVDVKKEKIAVKECINLCIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + +VDTN +P +DY IP NDDSS+SI L + ++ + Sbjct: 182 IGIVDTNCDPRNIDYPIPANDDSSKSIHLIISYLTNSIL 220 >gi|294675268|ref|YP_003575884.1| 30S ribosomal protein S2 [Prevotella ruminicola 23] gi|294474152|gb|ADE83541.1| ribosomal protein S2 [Prevotella ruminicola 23] Length = 269 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 92/232 (39%), Positives = 140/232 (60%), Gaps = 2/232 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YI+ ERN HIIDL +TV + +A + + G +I Sbjct: 8 QLLQAGCHFGHLKRKWNPAMAPYIYTERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQ 128 LFVATK Q + V E A V +W GGM+TN+ T+ ++++K+ +++ L+ + Sbjct: 68 LFVATKKQTKEVVAEKAASINMPYVIERWPGGMLTNFPTIRKAVKKMANIDRLMQDGTYS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 128 NLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVMKENIAVREANRLGIPVFGIV 187 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 DTNS+P+ +D+VIP NDD+ S+ + +A +GI + AD K+A Sbjct: 188 DTNSDPNNIDFVIPANDDAKDSVEAILNACCTAIAEGI-EERKVEKADEKAA 238 >gi|87310513|ref|ZP_01092642.1| ribosomal protein S2 [Blastopirellula marina DSM 3645] gi|87286734|gb|EAQ78639.1| ribosomal protein S2 [Blastopirellula marina DSM 3645] Length = 243 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 137/219 (62%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++L+ESG+ +GHR WNPKM YI+ ++N HIID+ +T+ L +A + ++ G Sbjct: 10 IKELVESGIHYGHRTSRWNPKMAPYIYAKKNQIHIIDVRETIRGLLRAKKYLTQVSEGGS 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK QA + A+R +N +WLGG +TN++T+ + +L +LE +L E Sbjct: 70 LVLFVGTKRQAGASIEREAERCGMPFINERWLGGTLTNFRTIRSRLTRLEELERILEGDE 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK + ++ R+ K+ R L+G+R M LP+ + +VD +EK AI+EA L I VA Sbjct: 130 LSKYSKKMQSSLAREYRKMYRNLNGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVA 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DT+ +PD +D +PGNDD RSI LF +A A +DG Sbjct: 190 LTDTDCDPDEIDLPVPGNDDGIRSIELFTKHLADAVLDG 228 >gi|228015987|gb|ACP50826.1| ribosomal protein S2 [Pinus resinosa] Length = 234 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 135/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN--K 125 + L V TK QA+D V A + + VN KWLGGM+TNW T +QK +DL++ N + Sbjct: 70 QFLIVGTKYQATDLVASTATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQNTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI L + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRA 230 >gi|291320183|ref|YP_003515444.1| 30S ribosomal protein S2 [Mycoplasma agalactiae] gi|290752515|emb|CBH40487.1| 30S ribosomal protein S2 [Mycoplasma agalactiae] Length = 317 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/232 (38%), Positives = 145/232 (62%), Gaps = 5/232 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +LLE+G FGH+ +WNPKM+ +++ + + H+I+ + T+ L+ A +++ VA+ R Sbjct: 40 KLLEAGTYFGHKKSMWNPKMKEFLYPQSKRGMHMINTNVTLQRLEFAYNILNKFVAKNPR 99 Query: 69 --ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV TK QA D + + A R+ + V+ +WLGG +TN T+ + ++ + +LE K+ Sbjct: 100 TTFIFVGTKKQAKDTIKDNALRTGSFYVSERWLGGTLTNASTIFKRVKVMEELEAQAAKK 159 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 QG+TKKE L +++ DKL + LDGIR M LP M V D N + +A++EAR + ++ Sbjct: 160 FQGYTKKEGLIKQKELDKLHKNLDGIRKMQSLPSFMIVADPNVDAIAVKEARSKGVKVIG 219 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS--AAIDGIARQHSYMGAD 236 ++D+NSNPD VD+ IP NDDS++SI L ++A A G + +Y G D Sbjct: 220 ILDSNSNPDAVDFGIPANDDSAKSITLIMTILADAIATARGGKAKFAYQGDD 271 >gi|148377525|ref|YP_001256401.1| 30S ribosomal protein S2 [Mycoplasma agalactiae PG2] gi|209573671|sp|A5IY48|RS2_MYCAP RecName: Full=30S ribosomal protein S2 gi|148291571|emb|CAL58957.1| 30S ribosomal protein S2 [Mycoplasma agalactiae PG2] Length = 317 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/232 (38%), Positives = 145/232 (62%), Gaps = 5/232 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +LLE+G FGH+ +WNPKM+ +++ + + H+I+ + T+ L+ A +++ VA+ R Sbjct: 40 KLLEAGTYFGHKKSMWNPKMKEFLYPQSKRGMHMINTNVTLQRLEFAYNILNKFVAKNPR 99 Query: 69 --ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV TK QA D + + A R+ + V+ +WLGG +TN T+ + ++ + +LE K+ Sbjct: 100 TTFIFVGTKKQAKDTIKDNALRTGSFYVSERWLGGTLTNASTIFKRVKVMEELEAQAAKK 159 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 QG+TKKE L +++ DKL + LDGIR M LP M V D N + +A++EAR + ++ Sbjct: 160 FQGYTKKEGLIKQKELDKLHKNLDGIRKMQSLPSFMIVADPNVDAIAVKEARSKGVKVIG 219 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS--AAIDGIARQHSYMGAD 236 ++D+NSNPD VD+ IP NDDS++SI L ++A A G + +Y G D Sbjct: 220 ILDSNSNPDAVDFGIPANDDSAKSITLIMTILADAIATARGGKAKFAYQGDD 271 >gi|261415353|ref|YP_003249036.1| ribosomal protein S2 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371809|gb|ACX74554.1| ribosomal protein S2 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 246 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 91/215 (42%), Positives = 138/215 (64%), Gaps = 1/215 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ LL +G FGH+ WNPKM+ YI E+N ++++LS+T +L++A + + G Sbjct: 6 SVEDLLAAGSHFGHQTQRWNPKMKPYILAEKNGIYVLNLSKTRDLLEEAAKAAAKISESG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK A CV++AA Q+ V ++WLGGM+TN++TV +SI+K+ ++ + + Sbjct: 66 KTVLFVGTKPTARQCVLDAAATCNQFSVTNRWLGGMLTNFQTVRKSIKKIDKIDTMEQDG 125 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q +KKE L+ R+R KL GIR+M LP L+ V D EK+A+ EARRL IPI+ Sbjct: 126 TFQALSKKEVLDKTRERAKLLDVFGGIREMVNLPGLLVVTDLAHEKIAVAEARRLHIPII 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DTN +P LVDY IP NDD+ +S+ L D +A+ Sbjct: 186 GICDTNVDPTLVDYPIPANDDAVKSLKLIVDYIAA 220 >gi|298372450|ref|ZP_06982440.1| ribosomal protein S2 [Bacteroidetes oral taxon 274 str. F0058] gi|298275354|gb|EFI16905.1| ribosomal protein S2 [Bacteroidetes oral taxon 274 str. F0058] Length = 271 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 91/232 (39%), Positives = 140/232 (60%), Gaps = 7/232 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q +LLE+G FGH WNP M YIF ERN HI+DL +TV +++A + I Sbjct: 3 QTNFEELLEAGAHFGHMKRKWNPAMAPYIFMERNGIHIMDLHKTVAKIEEAAKAIRQIAM 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +ILFVATK QA V + A + + +W GGM+TN++T+ ++++K+ ++++ Sbjct: 63 SDKKILFVATKKQAKQIVADRAAEAGMPYITERWAGGMLTNFQTIRKAVKKMDAIDKMST 122 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +K+ERL I R+R+KL+ L I DM +P +FVVD +E +A+ EA +L IP Sbjct: 123 DGTLDTMSKRERLQISRQREKLELNLGSISDMTRIPAAIFVVDVMKEHIAVSEANKLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI--ARQHSYM 233 + +VDTNS+P +D+VIP NDD++++I D++ S +D I RQ M Sbjct: 183 VFGIVDTNSDPTNIDFVIPCNDDATKAI----DIILSVMVDAIKEGRQEMKM 230 >gi|161347557|ref|YP_291352.2| 30S ribosomal protein S2 [Prochlorococcus marinus str. NATL2A] gi|209573695|sp|A2C1I7|RS2_PROM1 RecName: Full=30S ribosomal protein S2 gi|209573696|sp|Q46LH9|RS2_PROMT RecName: Full=30S ribosomal protein S2 Length = 230 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 7/223 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +++E+G FGH+ WNPKM RYI+ RN HIIDL +T + A + G Sbjct: 5 SLSEMMEAGAHFGHQTRRWNPKMSRYIYSARNGVHIIDLVKTAVCMNSAYKWTRGAARSG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + E Sbjct: 65 KRFLFVGTKKQASEVVAQEAIRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM---E 121 Query: 127 NQGFT----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L I Sbjct: 122 SSGAIAMRPKKEGAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLDI 181 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P+V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 182 PLVSMLDTNCDPDLCEIPIPCNDDAVRSVQLVLGRLADAINEG 224 >gi|262190232|ref|ZP_06048506.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae CT 5369-93] gi|262033877|gb|EEY52343.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae CT 5369-93] gi|327484776|gb|AEA79183.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae LMA3894-4] Length = 194 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 89/176 (50%), Positives = 125/176 (71%), Gaps = 1/176 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M +AL ++ + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV Sbjct: 1 MFNEALAELAKVGEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVR 60 Query: 111 QSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 QSI++L++LE + + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + Sbjct: 61 QSIKRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADH 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 E +AI+EA L IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A A +G Sbjct: 121 EHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEG 176 >gi|189218379|ref|YP_001939020.1| ribosomal protein S2 [Methylacidiphilum infernorum V4] gi|189185237|gb|ACD82422.1| Ribosomal protein S2 [Methylacidiphilum infernorum V4] Length = 246 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 136/219 (62%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + L++SG FGH+ WNPKM ++ + H+ID +T+ L+ A + GG Sbjct: 4 LEDLIKSGTHFGHKKDRWNPKMAPFLLGLKGGIHLIDPKKTMDYLKGACDFLKKVSFEGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ++LFV K QA V E A++S + VN +WLGG +TN T+ +SI +++ +++L N Sbjct: 64 KVLFVGCKRQAQRIVEEVARKSGSFYVNYRWLGGTLTNLVTIRKSIARMKWIDQLEENGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + R+ KL R+LDGI+DM LP + V+D RE++A+ EA++L IPIVA Sbjct: 124 MERLPKKEVSKLRRENIKLHRSLDGIKDMEKLPSAIVVIDVVREEIAVSEAQKLNIPIVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN NP+ +DY IP NDDS RSI + + +A I+G Sbjct: 184 LVDTNGNPENIDYPIPANDDSIRSIRTILEEINAAIIEG 222 >gi|324986495|ref|YP_004276365.1| ribosomal protein S2 [Pinus nelsonii] gi|323522683|gb|ADX94931.1| ribosomal protein S2 [Pinus nelsonii] Length = 234 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK ++L E+ + Sbjct: 70 KFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKNLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQFILNRLTSAICEGRA 230 >gi|325268206|ref|ZP_08134839.1| 30S ribosomal protein S2 [Prevotella multiformis DSM 16608] gi|324989348|gb|EGC21298.1| 30S ribosomal protein S2 [Prevotella multiformis DSM 16608] Length = 303 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 138/219 (63%), Gaps = 5/219 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + G +I Sbjct: 34 QLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGLARSGKKI 93 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 94 LFVATKKQAKEAVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKLMNDGTFA 153 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL IP+ +V Sbjct: 154 NLSKRELLQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLGIPVFGIV 213 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 DTNS+P +D+VIP NDD+ S+ +++ +A D IA Sbjct: 214 DTNSDPKNIDHVIPANDDAKDSV----EVILTACCDAIA 248 >gi|34501433|ref|NP_904220.1| ribosomal protein S2 [Physcomitrella patens subsp. patens] gi|75294046|sp|Q6YXJ9|RR2_PHYPA RecName: Full=30S ribosomal protein S2, chloroplastic gi|34494803|dbj|BAC85070.1| ribosomal protein S2 [Physcomitrella patens subsp. patens] Length = 236 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 87/224 (38%), Positives = 138/224 (61%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +++++GV FGH+ WNPKM YIF ER HI++L+QT L +A ++++ ++ Sbjct: 8 INLEEMMQAGVHFGHQARKWNPKMASYIFTERKGIHILNLTQTARFLSEACDLLANASSK 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++L V TK QA+D V A+ ++ + +N KWLGGM+TNW T+ + +Q+ +DLE NK Sbjct: 68 GKQVLIVGTKYQAADLVASASIKARCHYINQKWLGGMLTNWSTIEKRLQRFKDLE---NK 124 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE ++R+ +L++ L GI+ M LPD++ ++D +E AI E L Sbjct: 125 EKTGVLNQLPKKEAATLKRQLVQLRKYLGGIKYMTSLPDIVIIIDQQKEITAINECITLG 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + +VDT+ +PDL D IP NDD+ SI + + A +G Sbjct: 185 IPTICLVDTDCDPDLTDIPIPANDDARASIRWILNKLTLAISEG 228 >gi|149390343|ref|YP_001294341.1| ribosomal protein S2 [Dioscorea elephantipes] gi|209573601|sp|A6MMJ6|RR2_DIOEL RecName: Full=30S ribosomal protein S2, chloroplastic gi|148668035|gb|ABR01419.1| ribosomal protein S2 [Dioscorea elephantipes] Length = 236 Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 93/227 (40%), Positives = 137/227 (60%), Gaps = 6/227 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +++E+GV FGH WNP+M YI +R HI +L+ T L +A ++ D +RG Sbjct: 12 EMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTITARFLSEACDLVFDAASRGKSF 71 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKEN 127 L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + K N Sbjct: 72 LIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQNMGKLN 131 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + K++ ++RK L+ L GI+ M GLPD++ +VD +E +A+QE L IP + + Sbjct: 132 R-LPKRDAAMLKRKLSALQSYLGGIKYMTGLPDIVIIVDQEKEYMALQECAILGIPTICL 190 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +DTN NPDL D IP NDD+ SI L + + A +G ++SY+G Sbjct: 191 IDTNCNPDLADISIPANDDAIASIRLILNKLVFAICEG---RYSYIG 234 >gi|222084084|ref|YP_002519537.1| ribosomal protein S2 [Keteleeria davidiana] gi|220983636|dbj|BAH11402.1| ribosomal protein S2 [Keteleeria davidiana] Length = 234 Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 94/220 (42%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSLSEACDLAFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L + TK QA+D V AA + + VN KWLGGM+TNW T QK +DL E+ + Sbjct: 70 QFLIIGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++RK D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 LNQ-LPKKEAAMLKRKLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IP NDD SI L + SA +G Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEG 228 >gi|283794880|ref|YP_003359233.1| ribosomal protein S2 [Cryptomonas paramecium] gi|253981852|gb|ACT46769.1| ribosomal protein S2 [Cryptomonas paramecium] Length = 231 Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 141/231 (61%), Gaps = 4/231 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LLE+GV FGH+ WNPKM YI+ E+N THII+ ++ +L KA + + Sbjct: 1 MKQIALSDLLEAGVHFGHQTNKWNPKMLPYIYAEKNGTHIINGIESAKLLAKACNFVKEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 +G + LF+ TK QA++ V A++ Y +N +WLGG +TNW + ++ L+ LE+ Sbjct: 61 SQKGKKFLFIGTKRQATNIVASEAEKCGAYFINQRWLGGTLTNWPIIKSRVEALKRLEKN 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE ++ +KL + L GI++M LPDL ++D +E A++E +++ Sbjct: 121 SIGPSLDKVSKKEITAHKKNLEKLNKNLKGIKNMKQLPDLAIIIDQQKEITAVKECIKMK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP++ ++DTN +P L D IP NDDS++SI L + ++ + ++G ++SY Sbjct: 181 IPVICLLDTNCDPSLADIPIPANDDSAKSIKLILEKLSESIVEG---KNSY 228 >gi|324986424|ref|YP_004276295.1| ribosomal protein S2 [Pinus monophylla] gi|228016055|gb|ACP50893.1| ribosomal protein S2 [Pinus rzedowskii] gi|323522519|gb|ADX94861.1| ribosomal protein S2 [Pinus monophylla] Length = 234 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK ++L E+ + Sbjct: 70 QFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKNLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LQKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQFILNRLTSAICEGRA 230 >gi|195928699|gb|ACG56029.1| ribosomal protein subunit 2 [Agalinis maritima] Length = 216 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 87/208 (41%), Positives = 127/208 (61%), Gaps = 3/208 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ +++E+GV FGHR WNPKM YIF +R HI +L++T L + ++ D + Sbjct: 2 ITLEEMMEAGVHFGHRTKRWNPKMAPYIFAKRKGRHITNLARTARFLSETCDLVFDAASS 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELL 123 G + L V T +A+D V AAK++ +CVN KWLGGM+TNW +QK RDL E+ Sbjct: 62 GKQFLIVGTTKKAADLVARAAKKARCHCVNKKWLGGMLTNWSITETRLQKFRDLRMEQKT 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + N+ K++ ++R +LKR L G++ M GLPD++ +VD E A++E L IP Sbjct: 122 GRLNR-LPKRDAAVVKRHLSRLKRYLGGVKYMTGLPDIVIIVDQREEYRALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 + ++DTN +PDL D IP NDDS SI Sbjct: 181 TICLIDTNCDPDLADISIPANDDSRSSI 208 >gi|195928749|gb|ACG56054.1| ribosomal protein subunit 2 [Agalinis maritima] Length = 217 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ +++E+GV FGHR WNPKM YIF +R HI +L++T L + ++ D + Sbjct: 1 NITLEEMMEAGVHFGHRTKRWNPKMAPYIFAKRKGRHITNLARTARFLSETCDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 G + L V T +A+D V AAK++ +CVN KWLGGM+TNW +QK RDL E+ Sbjct: 61 SGKQFLIVGTTKKAADLVARAAKKARCHCVNKKWLGGMLTNWSITETRLQKFRDLRMEQK 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + N+ K++ ++R +LKR L G++ M GLPD++ +VD E A++E L I Sbjct: 121 TGRLNR-LPKRDAAVVKRHLSRLKRYLGGVKYMTGLPDIVIIVDQREEYRALRECITLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 P + ++DTN +PDL D IP NDDS SI Sbjct: 180 PTICLIDTNCDPDLADISIPANDDSRSSI 208 >gi|124025496|ref|YP_001014612.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. NATL1A] gi|72001847|gb|AAZ57649.1| SSU ribosomal protein S2P [Prochlorococcus marinus str. NATL2A] gi|123960564|gb|ABM75347.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. NATL1A] Length = 222 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 133/219 (60%), Gaps = 7/219 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++E+G FGH+ WNPKM RYI+ RN HIIDL +T + A + G R L Sbjct: 1 MMEAGAHFGHQTRRWNPKMSRYIYSARNGVHIIDLVKTAVCMNSAYKWTRGAARSGKRFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 FV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + E+ G Sbjct: 61 FVGTKKQASEVVAQEAIRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM---ESSGA 117 Query: 131 T----KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L IP+V+ Sbjct: 118 IAMRPKKEGAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLDIPLVS 177 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 178 MLDTNCDPDLCEIPIPCNDDAVRSVQLVLGRLADAINEG 216 >gi|46206262|ref|ZP_00047516.2| COG0052: Ribosomal protein S2 [Magnetospirillum magnetotacticum MS-1] Length = 146 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 87/145 (60%), Positives = 112/145 (77%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 +SDTVAR R+LFV TK QA + EAAKRSAQY VNS WL GM+TNWKT+S SIQ+LR Sbjct: 1 MSDTVARAARVLFVGTKRQALTAIAEAAKRSAQYYVNSCWLVGMLTNWKTISGSIQRLRK 60 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++E L G TKKERL + R+++KL++AL GI+DM G+PDL+FV+DTN+E+LAI+EA+ Sbjct: 61 VDETLEGGAVGLTKKERLMLTREKEKLEKALGGIKDMVGVPDLLFVIDTNKEQLAIKEAQ 120 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPG 203 RL IP+ A+VDT NPD + PG Sbjct: 121 RLGIPVAAIVDTYCNPDGILLHRPG 145 >gi|228016684|gb|ACP51512.1| ribosomal protein S2 [Pinus aristata] Length = 234 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMTPYIFTERKDTHIINLAKTARSLSEACDLVFDIADRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK ++L E+ + Sbjct: 70 QFLIVGTKYQATDLVASAATEARCHYVNKKWLGGMLTNWSTTETRLQKFKNLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +PDLVD IP NDD SI + + SA +G A Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQFILNRLTSAICEGRA 230 >gi|294056015|ref|YP_003549673.1| ribosomal protein S2 [Coraliomargarita akajimensis DSM 45221] gi|293615348|gb|ADE55503.1| ribosomal protein S2 [Coraliomargarita akajimensis DSM 45221] Length = 270 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 92/230 (40%), Positives = 142/230 (61%), Gaps = 9/230 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T + LL++GV FGH+ WNPK + Y++ RN IIDL +T +L+KA + +TVA G Sbjct: 4 TPKDLLDAGVHFGHQLRRWNPKSKPYVYDNRNGISIIDLEKTHALLEKAYAFVEETVASG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LF+ TK QA + V EAA S +CVN +W+GG +TN+ T+ S+ K R + L Sbjct: 64 KDVLFIGTKKQAQEIVREAATASQMPFCVN-RWMGGGLTNFATIKTSLAKYR---KFLKM 119 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + G KE I R+ ++ R +GI ++ LP +FV+DT E++A+ EA RL Sbjct: 120 DRDGDLSKLPGKEEAAIRRQMARMHRNFEGILEVNELPAAVFVIDTKSEEIAVNEANRLG 179 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+V +VDTNS+P ++D+ IPGNDD+ +SI + + + A G+A++ + Sbjct: 180 IPVVGLVDTNSDPTVLDFPIPGNDDAVKSIRIIVETIMEAIQSGLAQREA 229 >gi|22711971|ref|NP_683777.1| ribosomal protein S2 [Chaetosphaeridium globosum] gi|25009140|sp|Q8MA09|RR2_CHAGL RecName: Full=30S ribosomal protein S2, chloroplastic gi|22416975|gb|AAM96575.1| ribosomal protein S2 [Chaetosphaeridium globosum] Length = 236 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 93/222 (41%), Positives = 138/222 (62%), Gaps = 3/222 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++E+GV GH+ WNPKM YIF ER HII+L+QT L +A ++ +T G Sbjct: 8 LEDMMEAGVYLGHQARKWNPKMAPYIFAERKGIHIINLTQTARFLTEACDLLFNTAKNGE 67 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LNK 125 + L V TK QA+D V AK+S + VN KWLGGM+TNW T+ + ++KL++LE L +N Sbjct: 68 QFLIVGTKYQAADLVALTAKKSRCHYVNQKWLGGMLTNWTTIKKRLKKLQELESLESING 127 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ F KKE N++R+ +L++ L GIR M LPD++ ++D E A++E L IP + Sbjct: 128 FDR-FPKKEASNLKRQLAQLRKYLGGIRHMTKLPDIVIIIDQQHELTALKECLILGIPTI 186 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VDT+ +PDL D IP NDDS SI + + ++ +G A Sbjct: 187 CFVDTDCDPDLTDIPIPANDDSRASIQWILNKLTNSIREGRA 228 >gi|168048123|ref|XP_001776517.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672108|gb|EDQ58650.1| predicted protein [Physcomitrella patens subsp. patens] Length = 236 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 87/224 (38%), Positives = 137/224 (61%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + ++++ GV FGH+ WNPKM YIF ER HI++L+QT L +A ++++ ++ Sbjct: 8 INLEEVMQVGVHFGHQARKWNPKMASYIFTERKGIHILNLTQTARFLSEACDLLANASSK 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++L V TK QA+D V A+ ++ + +N KWLGGM+TNW T+ + +Q+ +DLE NK Sbjct: 68 GKQVLIVGTKYQAADLVASASIKARCHYINQKWLGGMLTNWSTIEKRLQRFKDLE---NK 124 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G KKE ++R+ +L++ L GI+ M LPD++ ++D +E AI E L Sbjct: 125 EKTGVLNQLPKKEAATLKRQLVQLRKYLGGIKYMTSLPDIVIIIDQQKEITAINECITLG 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + +VDT+ +PDL D IP NDD+ SI + + A +G Sbjct: 185 IPTICLVDTDCDPDLTDIPIPANDDARASIRWILNKLTLAISEG 228 >gi|464712|sp|P35014|RR2_GALSU RecName: Full=30S ribosomal protein S2, chloroplastic gi|629440|pir||S39513 ribosomal protein S2, chloroplast - red alga (Cyanidium caldarium) chloroplast gi|429171|emb|CAA48018.1| ribosomal protein 2 [Galdieria sulphuraria] Length = 233 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 129/217 (59%), Gaps = 10/217 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M T+ +LL + V GHR WNPKM +I+ ERN HIIDL QT +L +A + Sbjct: 1 MTTSVVTLSELLAARVHLGHRFNKWNPKMVSFIYAERNKVHIIDLVQTAFLLGEACDYVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +G + LFV T+ + + + E A+R + +N +WLGG++TNW T+ +Q L Sbjct: 61 LLAKKGKKFLFVGTRQELNTILAEEAERCNSFYINQRWLGGLLTNWVTIKSRVQALE--- 117 Query: 121 ELLNKENQGF----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 KE++GF KKE ++++ DKL+R +GIR M LPD++ ++D ++ A+QE Sbjct: 118 ---KKESEGFFNSLPKKESARLKKELDKLRRYFNGIRKMNTLPDVVIIIDQRKDLTAVQE 174 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 +L IP + +VDTN NPD+VD IP NDD+ S+ L Sbjct: 175 CNKLNIPTICIVDTNCNPDIVDLPIPANDDAICSVKL 211 >gi|60117214|ref|YP_209548.1| ribosomal protein S2 [Huperzia lucidula] gi|75286701|sp|Q5SCY1|RR2_HUPLU RecName: Full=30S ribosomal protein S2, chloroplastic gi|50660022|gb|AAT80744.1| ribosomal protein S2 [Huperzia lucidula] Length = 235 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/232 (41%), Positives = 136/232 (58%), Gaps = 10/232 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +++E+GV GH+ WNPKM YIF ER HII+L++T +A +++ + Sbjct: 8 INLEEMMEAGVHSGHQARKWNPKMAPYIFAERKGIHIINLTRTARFSSEACDSVANVASE 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G + V TK QA+D AA ++ + VN KWLGGM+TNW T+ + +QKLRDLE NK Sbjct: 68 GKQFSMVGTKYQAADLTASAAIKARCHYVNKKWLGGMLTNWSTMEKRLQKLRDLE---NK 124 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G +KE + + KLK+ L GI M LPD++ +VD E +AI+E L Sbjct: 125 EKTGGFDRLPEKEAAISKGQLAKLKKYLGGIEYMASLPDVVTIVDQREESIAIKECITLN 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP + +VDT+ +PDL D IP NDD+ SI D +ASA +G + SYM Sbjct: 185 IPTICLVDTDCDPDLADIPIPANDDARASIRWISDKLASAICEG---RKSYM 233 >gi|327404460|ref|YP_004345298.1| 30S ribosomal protein S2P [Fluviicola taffensis DSM 16823] gi|327319968|gb|AEA44460.1| SSU ribosomal protein S2P [Fluviicola taffensis DSM 16823] Length = 256 Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 133/217 (61%), Gaps = 1/217 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LLE+GV FGH WNP M YIF E+ HIIDL++T+ L +A + G ++L Sbjct: 9 LLEAGVHFGHLKRKWNPAMAPYIFDEKKGIHIIDLNKTIAHLDQACAAMKQIAKSGKKVL 68 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FVATK QA + + + V +W GGM+TN++T +SI+K+ ++++ + Sbjct: 69 FVATKKQAKEIITDRVAPINMPYVTERWSGGMLTNFQTTRKSIRKMVSIDKMKTDGTWET 128 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K+ERL R+RDKL++ I DM P +F+VD +E +A+ EA+RL IP A+VD Sbjct: 129 LNKRERLFKTRQRDKLEKTFGSIADMTRQPAAIFIVDILKEHIALAEAKRLGIPTFAMVD 188 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 TNS+P LVD+ IP NDD+++SIA+ D + + +G+ Sbjct: 189 TNSDPRLVDFPIPANDDATKSIAIILDAICGSIKEGL 225 >gi|269991250|emb|CAX12428.1| 30S ribosomal protein S2 [Fucus vesiculosus] Length = 231 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 135/212 (63%), Gaps = 5/212 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + QLLE+GV FGH+ WNPKM YI+ ERN HI+DL QT L++A Sbjct: 1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 A+ LFV TK +AS + A++ + +N +WLGG +TNW T+ IQ+L +LEE Sbjct: 61 SAKNQTFLFVGTKKRASSLIASEAQKCGAFYINHRWLGGTLTNWITIKGRIQRLNNLEEQ 120 Query: 122 --LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L + +N KKE N++++ +KLK+ +GI+ M +PD++ ++D RE +AIQEA Sbjct: 121 EKLTSFKN--LPKKEASNLKKELEKLKKYFNGIKGMKKIPDILVIIDQKREIIAIQEALS 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 L IPI++++DTN +P+L IPGNDDS RSI Sbjct: 179 LNIPIISIIDTNCDPNLATIPIPGNDDSIRSI 210 >gi|309787158|ref|ZP_07681770.1| ribosomal protein S2 [Shigella dysenteriae 1617] gi|308924736|gb|EFP70231.1| ribosomal protein S2 [Shigella dysenteriae 1617] Length = 193 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 1/176 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M +AL ++ +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV Sbjct: 1 MFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVR 60 Query: 111 QSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 QSI++L+DLE + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + Sbjct: 61 QSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADH 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G Sbjct: 121 EHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREG 176 >gi|193216480|ref|YP_001999722.1| 30S ribosomal protein S2 [Mycoplasma arthritidis 158L3-1] gi|193001803|gb|ACF07018.1| ribosomal protein S2 [Mycoplasma arthritidis 158L3-1] Length = 307 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 95/232 (40%), Positives = 141/232 (60%), Gaps = 5/232 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LLE+G FGHR WNPKM++YI +R HIID+S+T L+ A ++++ + Sbjct: 34 KLLEAGTYFGHRVSQWNPKMKQYILGKRMGIHIIDISKTQKTLEYAYKLLNKMAQKPISF 93 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 ++V TK QA + AA R+ V+ +WLGG +TN +T+ +S+++L LEEL QG Sbjct: 94 IWVGTKKQAKKAIEAAALRTNSVYVSERWLGGTLTNSQTIFRSVKELERLEELQANGYQG 153 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGG---LPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +TKKE L ++K KL++ L GIR + G P +M +++AI EA++ I I A Sbjct: 154 YTKKEGLLFDKKIAKLQKNLGGIRKLAGKATFPKVMICASPLEDEIAIAEAKKKGIKIFA 213 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA--AIDGIARQHSYMGAD 236 + DTNSNPDLVD+ IP NDDS +SI + ++A A A G A+ +Y D Sbjct: 214 IQDTNSNPDLVDFAIPANDDSVKSITVVTTILADAICAARGEAQLFAYKSND 265 >gi|323510733|gb|ADX87365.1| ribosomal protine S2 [Pinus taeda] Length = 234 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 135/222 (60%), Gaps = 6/222 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D +AR G Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFD-IARRG 68 Query: 68 R--ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELL 123 R L V TK QA+D V AA + VN KWLGGM+TNW T +QK +DL E+ Sbjct: 69 RKQFLIVGTKYQATDLVASAATEGRCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQDT 128 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 129 GRFNQ-LPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIP 187 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDT+ +PDLVD IP NDD SI L + + SA +G Sbjct: 188 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEG 229 >gi|57229637|gb|AAW45732.1| ribosomal protein subunit 2 [Hyobanche atropurpurea] Length = 214 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NITLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ Sbjct: 61 RGKQFLIVGTKNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + N K++ ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L I Sbjct: 121 AGRLNH-LPKRDVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P + ++DTN +PDL D IP NDD+ SI L Sbjct: 180 PTICLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|149174648|ref|ZP_01853273.1| 30S ribosomal protein S2 [Planctomyces maris DSM 8797] gi|148846342|gb|EDL60680.1| 30S ribosomal protein S2 [Planctomyces maris DSM 8797] Length = 252 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 90/221 (40%), Positives = 136/221 (61%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +LE+GV +GH+ WNPKM YI+ RN HIIDL +TV + + + + ++ Sbjct: 4 LVVKDILEAGVHYGHKTSRWNPKMRPYIYGRRNQIHIIDLKETVRGIIRGKRYLERVASQ 63 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ILFV TK QA + +AA V +WLGG +TN++TV +++L +LE Sbjct: 64 GSLILFVGTKKQAQGPIRDAATACGMPYVTERWLGGALTNFRTVRNRLKRLEELESFDET 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E ++KK + + R++ K+ R L+GIR M LP+ + VVD +EK A+ EA L I + Sbjct: 124 GEIHSYSKKMQSTLLREKRKVFRNLNGIRTMNRLPEALVVVDPTKEKNAVHEAHILGIKV 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V ++DT+S+PD VD IPGNDDS RSI L + +AS+ ++G Sbjct: 184 VGLIDTDSDPDEVDLPIPGNDDSIRSIRLVMNQLASSIMEG 224 >gi|156598337|gb|ABU85429.1| ribosomal protein S2 [Musa acuminata] Length = 235 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E+ Sbjct: 67 RGKNFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + K N+ K++ ++RK L+ L GI+ M GLPD++ +VD E +A++E L I Sbjct: 127 MGKLNR-LPKRDAAMLKRKLSALQTYLGGIKYMTGLPDIVIIVDQQEEYMALRECVILGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADISIPANDDAIASIRLVLNKLVSAICEG 228 >gi|228017373|gb|ACP52190.1| ribosomal protein S2 [Larix occidentalis] gi|307683589|dbj|BAJ19773.1| ribosomal protein S2 [Larix decidua] Length = 234 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSLSEACDLAFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL E+ + Sbjct: 70 QFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNRP-PKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IP NDD SI L + SA +G Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEG 228 >gi|228016561|gb|ACP51391.1| ribosomal protein S2 [Abies firma] Length = 234 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/220 (41%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T +A ++ D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSSSEACDLLFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L + TK QA+D V AA + + VN KWLGGM+TNW T QK +DL E+ + Sbjct: 70 QFLIIGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 NQ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNQP-PKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IP NDD SI L + SA +G Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEG 228 >gi|307683495|dbj|BAJ19726.1| ribosomal protein S2 [Pseudotsuga sinensis var. wilsoniana] Length = 234 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSLSEACDLAFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL E+ + Sbjct: 70 QFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNRP-PKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IP NDD SI L + SA +G Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEG 228 >gi|169142782|ref|YP_001687207.1| ribosomal protein S2 [Aneura mirabilis] gi|209573634|sp|B0YPM1|RR2_ANEMR RecName: Full=30S ribosomal protein S2, plastid gi|153973808|gb|ABS54468.1| ribosomal protein S2 [Aneura mirabilis] Length = 239 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 135/219 (61%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+G+ FGH+ WNPKM +IF ER + HII+L+QT L +A + ++ +RG Sbjct: 10 LEEMMEAGIHFGHQVRKWNPKMAPFIFTERKSVHIINLTQTARFLSEACDLAANAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK QA+D V+ AA + + +N KWLGGM+TNW T+ +QK R+LE E L Sbjct: 70 QFLIVGTKYQAADLVVSAASGARCHYINQKWLGGMLTNWSTIETRLQKFRNLEKEKLAGI 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ER+ +L++ GI+ M LPD++ ++D +E AI+E L IP + Sbjct: 130 FERLPKKEVADSERRLSRLRKYFGGIKYMTALPDIVIIIDQRKEFTAIRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +P++ D IP NDD+ SI + + A +G Sbjct: 190 LVDTDCDPNVTDIPIPANDDARASIKWISNKLTLAICEG 228 >gi|261749478|ref|YP_003257164.1| 30S ribosomal subunit protein S2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497571|gb|ACX84021.1| 30S ribosomal subunit protein S2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 246 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 90/220 (40%), Positives = 138/220 (62%), Gaps = 5/220 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LL++GV FGH WNP M +IF ++ HIIDLS+T+ L++A + V+ +IL Sbjct: 10 LLKAGVHFGHIARKWNPNMRPFIFMKKGGIHIIDLSKTITKLEEACIGLKKIVSMEKKIL 69 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V TK+QA + V+ A+ CV +WLGG +TN+ T+ +S++K+ ++E++ K+N F Sbjct: 70 LVGTKAQAKEKVLFYARSVNMPCVTERWLGGFLTNFATIRRSVKKMNNIEKM--KKNGTF 127 Query: 131 ---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +KKERL I R KL + L I M LP +F+VD +EK+A+ EA +L IP+ A+ Sbjct: 128 DTLSKKERLLISRLYAKLYKNLGSISSMNHLPGGIFLVDPYKEKIALSEAIKLNIPVFAM 187 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VDTN+NP+ + + IP NDDSS+SI + + A +G + Sbjct: 188 VDTNTNPNGIQFPIPSNDDSSKSIDIILKFITKAIQEGFS 227 >gi|313183982|ref|YP_004021139.1| ribosomal protein S2 [Castanea mollissima] gi|290487178|gb|ADD29973.1| ribosomal protein S2 [Quercus nigra] gi|309321509|gb|ADO65049.1| ribosomal protein S2 [Castanea mollissima] Length = 236 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+ME YI +R HII+L +T L +A ++ DT +RG Sbjct: 10 LEEMMEAGVHFGHGTSKWNPRMEPYISSKRKGIHIINLIRTARFLSEACDLVFDTASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTETILHKFRDLRTEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E +A++E L IP + Sbjct: 130 LNR-LPKRDSAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYMALRECMILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|163785816|ref|ZP_02180298.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] gi|159878914|gb|EDP72936.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] Length = 251 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/188 (44%), Positives = 133/188 (70%), Gaps = 7/188 (3%) Query: 52 LQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQ 111 ++A + + D VA GG ILFV TK QA D + E A+R + +N +WLGG++TN++TV + Sbjct: 1 FKQAWEFVRDEVAAGGDILFVGTKKQAQDIIEEEAQRCGAFYINQRWLGGLLTNFQTVRK 60 Query: 112 SIQKLRDLEELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 SI+KL+ LE + E +G KKE + I+++++KL+R L GI++M +PD+++VVDT Sbjct: 61 SIEKLKRLERM---EAEGAFEILPKKEVVKIKKQKEKLERFLKGIKEMEKMPDVIYVVDT 117 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 RE+LA++EA++L IP+VA+ D+N +PDL+DY IPGNDD+ ++I L +A A ++G + Sbjct: 118 VREELAVKEAKKLGIPVVAIADSNCDPDLIDYPIPGNDDAIKAIKLITSKIADAVVEGRS 177 Query: 228 RQHSYMGA 235 + +GA Sbjct: 178 LREKEVGA 185 >gi|108796848|ref|YP_636395.1| ribosomal protein S2 [Staurastrum punctulatum] gi|122239144|sp|Q32RY1|RR2_STAPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|61393616|gb|AAX45757.1| ribosomal protein S2 [Staurastrum punctulatum] Length = 233 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 140/224 (62%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +++E+GV FGH+ WNPKM YIF +R +I+ + +T +L +A + ++ ++ Sbjct: 8 ISLEEMMEAGVHFGHQTRKWNPKMAPYIFTKRRGIYILHIFKTARLLAEACEFSANAASQ 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G + L V TK QA+D V AAK++ + VN KWLGGM+TNW T+ + +L+ LE ++ Sbjct: 68 GKQFLIVGTKYQAADLVSAAAKKARCHYVNQKWLGGMLTNWSTIETRVTRLKQLE---DQ 124 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 EN G KKE ++R+ +L++ L+GI+ M LPD++ ++D +E A++E +L Sbjct: 125 ENAGVLNQLPKKEAAVLKRQLIQLRKYLEGIKYMTRLPDIVIIIDQQKEATAVEECIKLG 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + +VDT+ +PDL D IP NDD+ SI D + +A +G Sbjct: 185 IPTICLVDTDCDPDLTDMPIPANDDARSSIRWILDKLTTAIREG 228 >gi|91201169|emb|CAJ74229.1| strongly similar to 30S ribosomal protein S2 [Candidatus Kuenenia stuttgartiensis] Length = 234 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/219 (41%), Positives = 137/219 (62%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++L+E+G FGHR WNPKM+ +IF ++N HII+L +TV L A + +++ V Sbjct: 6 IQELVEAGFHFGHRTSRWNPKMKPFIFGKQNLIHIINLRETVKGLITACRFVTNLVQTKK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 ILFV TK QA D AKR + V+ +WLGG +TN+ T+ +++L +LE++ + E Sbjct: 66 DILFVGTKWQAQDITAREAKRCGMHYVSERWLGGALTNFDTIRSRLERLEELEKMKDTGE 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK ++ R+ K+ L+GIR+M LP + VVD E AI+EA++L IP V Sbjct: 126 INQYSKKMISSLNREYKKILTNLEGIRNMTKLPGALVVVDPRYEHNAIKEAKKLGIPTVC 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DT+ +PD+VD +PGNDD+ RSI LF A A + G Sbjct: 186 LADTDCDPDMVDICVPGNDDAIRSINLFLSKTADAVLAG 224 >gi|124302894|ref|YP_001023689.1| ribosomal protein S2 [Angiopteris evecta] gi|209573635|sp|A2T321|RR2_ANGEV RecName: Full=30S ribosomal protein S2, chloroplastic gi|110628292|gb|ABG79588.1| ribosomal protein S2 [Angiopteris evecta] Length = 238 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 10/230 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+G+ FGHR WNPKM YIF ER HI++L+QT L +A ++ G Sbjct: 10 LEEMMEAGIHFGHRTQKWNPKMSPYIFTERKGVHILNLTQTARFLSEACDLVFHAANEGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK Q SD + AA ++ + VN KWLGGM+TNW T+ +Q+ +DLE NK N Sbjct: 70 QFLIVGTKYQVSDLIASAAIKARCHYVNQKWLGGMLTNWSTMETRLQRFQDLE---NKAN 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G K+E ++R+ +L++ L GI+ M PD++ + D ++E AI+E L IP Sbjct: 127 TGGFNRLPKREAAILKRQLSQLQKYLGGIKYMIDPPDIVIIADQHKESTAIKECINLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + VVDT+ +PDL D IP NDD+ SI + + A +G Q +YM Sbjct: 187 TICVVDTDCDPDLTDIPIPANDDARSSIRWILNKLTFAIHEG---QSNYM 233 >gi|283778742|ref|YP_003369497.1| 30S ribosomal protein S2 [Pirellula staleyi DSM 6068] gi|283437195|gb|ADB15637.1| ribosomal protein S2 [Pirellula staleyi DSM 6068] Length = 256 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 134/219 (61%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +L+E+GV FGHR WNPKM YI+ +N HI+D+ +TV L +A + ++ A+G Sbjct: 7 VAELVEAGVHFGHRASRWNPKMAPYIYARKNGIHIVDIRETVRGLLRAKKYLAQVAAQGS 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + A R V +WLGG +TN++T+ + +L ++E++ E Sbjct: 67 LILFVGTKKQAGPAIEREALRCHMPFVAERWLGGTLTNFRTIRSRLGRLEEVEKVRGGEE 126 Query: 128 QG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK + + R+ K+ R L+GIR + LP+ + + D N+EK AI+EAR L I VA Sbjct: 127 LATYSKKAQSALAREYRKMYRNLNGIRTLNRLPECLVIFDPNKEKNAIKEARSLGIKTVA 186 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT+ +PD VD IPGNDD RS+ L +A A + G Sbjct: 187 LIDTDCDPDTVDLPIPGNDDGIRSVELIARHLAEAILVG 225 >gi|237688453|ref|YP_002905072.1| ribosomal protein S2 [Picea sitchensis] gi|226875282|gb|ACO89021.1| ribosomal protein S2 [Picea sitchensis] gi|307683683|dbj|BAJ19820.1| ribosomal protein S2 [Picea morrisonicola] Length = 234 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLAFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL E+ + Sbjct: 70 QFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNRP-PKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IP NDD SI L + SA +G Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEG 228 >gi|50876043|emb|CAG35883.1| probable 30S ribosomal protein S2 [Desulfotalea psychrophila LSv54] Length = 240 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 132/205 (64%), Gaps = 9/205 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++ +L++G+ FGH+ WNPKM+ YI+ RN +I++L T + KA + IS Sbjct: 37 MSQVTVKDMLQAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDLTKRLFDKACEFISSN 96 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA + E A+R QY V+ +WLGGM+TN++T+ SI +L+ +E + Sbjct: 97 VKNEGSVLFVGTKRQAQSIIKEEARRCGQYYVDHRWLGGMLTNFQTIKNSIDRLKSIEAM 156 Query: 123 -----LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +N+ F KKE L + ++R KL+R + GI+DM LP ++ +VD +E +A+ EA Sbjct: 157 QEDGSINR----FPKKEILLMGKERVKLERNVGGIKDMRALPAVIVIVDPRKESIAVSEA 212 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIP 202 +L IP+VA+ DTN +PD +DY P Sbjct: 213 GKLGIPVVALTDTNCDPDGIDYRNP 237 >gi|290487134|gb|ADD29951.1| ribosomal protein S2 [Antirrhinum majus] Length = 236 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 134/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|17129596|dbj|BAB72236.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVAWAAIRARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 FNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIIIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|297170545|gb|ADI21573.1| ribosomal protein S2 [uncultured verrucomicrobium HF0070_35E03] Length = 323 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 148/229 (64%), Gaps = 9/229 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LL++GV FGH+ WNPK + +++ R+ IIDL +T +L+KA + + + V++ Sbjct: 3 ITVKDLLDAGVHFGHQVRRWNPKSKPFVYDNRHGISIIDLEKTYDLLEKASKAVEEVVSQ 62 Query: 66 GGRILFVATKSQASDCVME-AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ++L V TK QA + + E AA + + VN +W+GG +TN++TVS S+ K + + L Sbjct: 63 GKQVLLVGTKRQAQEPIRELAAATNMPFSVN-RWMGGTLTNFETVSASLAKYK---KFLR 118 Query: 125 KENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G KE I+R+ +++R +G+ ++ LP +FV+D++ E +A+ EA RL Sbjct: 119 MEDDGSLDKLPGKEGAAIKRQMSRMQRNFEGLLNLQDLPGALFVIDSHNESIAVAEANRL 178 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +IP++A+VD+NS+P L+ + IPGNDDS++SI + D++ A G R+ Sbjct: 179 KIPVIALVDSNSDPSLLSHPIPGNDDSTKSIRIIVDVILDAIQSGAVRR 227 >gi|39573652|dbj|BAD04077.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 136/220 (61%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 FNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D +IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADILIPANDDAISSIRLILNKLVFAICEG 228 >gi|69216177|gb|AAZ03905.1| ribosomal protein S2 [Typha latifolia] Length = 235 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 90/223 (40%), Positives = 132/223 (59%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL EE Sbjct: 67 RGKSFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMLTNWSTTETRLSKFRDLRAEEK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + K N+ K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L I Sbjct: 127 MGKLNR-LPKRDAAMLKRKLYTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECAILGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|69216175|gb|AAZ03904.1| ribosomal protein S2 [Ranunculus macranthus] Length = 235 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNH-LPKRDSAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEG 228 >gi|161485626|ref|YP_064890.2| 30S ribosomal protein S2 [Desulfotalea psychrophila LSv54] gi|209573714|sp|Q6AP41|RS2_DESPS RecName: Full=30S ribosomal protein S2 Length = 204 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 132/205 (64%), Gaps = 9/205 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++ +L++G+ FGH+ WNPKM+ YI+ RN +I++L T + KA + IS Sbjct: 1 MSQVTVKDMLQAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDLTKRLFDKACEFISSN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA + E A+R QY V+ +WLGGM+TN++T+ SI +L+ +E + Sbjct: 61 VKNEGSVLFVGTKRQAQSIIKEEARRCGQYYVDHRWLGGMLTNFQTIKNSIDRLKSIEAM 120 Query: 123 -----LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +N+ F KKE L + ++R KL+R + GI+DM LP ++ +VD +E +A+ EA Sbjct: 121 QEDGSINR----FPKKEILLMGKERVKLERNVGGIKDMRALPAVIVIVDPRKESIAVSEA 176 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIP 202 +L IP+VA+ DTN +PD +DY P Sbjct: 177 GKLGIPVVALTDTNCDPDGIDYRNP 201 >gi|309322407|ref|YP_003934487.1| ribosomal protein S2 [Cathaya argyrophylla] gi|307683333|dbj|BAJ19640.1| ribosomal protein S2 [Cathaya argyrophylla] Length = 234 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 90/220 (40%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L ++ + D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSESCDLAFDLAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +D E+ + Sbjct: 70 QFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDFKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ KKE ++R+ D+L + L GIR M LPD+ + + E +A++E R L IP + Sbjct: 130 FNR-LPKKEAAMLKRQLDQLHKYLGGIRYMTSLPDIAIITNQQEESIALRECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IP NDD SI + + SA +G Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIRFILNRLTSAICEG 228 >gi|289065078|ref|YP_003433964.1| ribosomal protein S2 [Typha latifolia] gi|281371761|gb|ADA63688.1| ribosomal protein S2 [Typha latifolia] Length = 236 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 90/223 (40%), Positives = 132/223 (59%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL EE Sbjct: 67 RGKSFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMLTNWSTTETRLSKFRDLRAEEK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + K N+ K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L I Sbjct: 127 MGKLNR-LPKRDAAMLKRKLYTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECAILGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|195928715|gb|ACG56037.1| ribosomal protein subunit 2 [Agalinis fasciculata] gi|195928717|gb|ACG56038.1| ribosomal protein subunit 2 [Agalinis fasciculata] Length = 218 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 87/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKRAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTNS+PDL D IP NDD+ SI L Sbjct: 183 CLIDTNSDPDLADLSIPANDDARSSICLI 211 >gi|122893979|ref|YP_001004175.1| ribosomal protein S2 [Ranunculus macranthus] gi|209573643|sp|A1XGM7|RR2_RANMC RecName: Full=30S ribosomal protein S2, chloroplastic gi|85540793|gb|ABC70745.1| ribosomal protein S2 [Ranunculus macranthus] Length = 236 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNH-LPKRDSAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEG 228 >gi|69216179|gb|AAZ03906.1| ribosomal protein S2 [Yucca schidigera] Length = 235 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + K Sbjct: 70 NFLIVGTKNKVADLVASAAIRARCHYVNRKWLGGMLTNWSTTETRLHKFRDLRAEQKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRKLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|6650128|gb|AAF21732.1|AF055144_1 ribosomal protein subunit 2 [Orobanche uniflora] Length = 202 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 126/202 (62%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D+ RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACNLVFDSAGRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++ASD V AA ++ +CVN KWLGGM+TNW T + + K RDL E+ + N +K Sbjct: 61 KNKASDSVAGAAIKARCHCVNKKWLGGMLTNWSTTEKRLHKFRDLRMEQKTGRINL-LSK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 K+ ++R+ +L+ L GI+ M GLPD++ ++D + E +A+QE L IP + ++DTN Sbjct: 120 KDAAVVKRELSRLQTYLGGIKYMTGLPDIVIILDQHEEYMALQECITLVIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ S+ L Sbjct: 180 DPDLADISIPANDDAISSLRLI 201 >gi|307128587|ref|YP_003880617.1| 30S ribosomal protein S2 [Candidatus Sulcia muelleri CARI] gi|306483049|gb|ADM89919.1| 30S ribosomal protein S2 [Candidatus Sulcia muelleri CARI] Length = 218 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 87/216 (40%), Positives = 131/216 (60%), Gaps = 7/216 (3%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 G FGH WNP M YI ++ HIID+ +T+ + +A + I + + G +ILFVAT Sbjct: 2 GAHFGHTTSKWNPNMRPYILMKKGGIHIIDIYKTIKKINEACKFIKNIASSGKKILFVAT 61 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----F 130 K QA D V + AK+ + +WLGG++TN T+ QS++K+ + NK+ G Sbjct: 62 KKQAKDIVYDFAKKVNMPSITERWLGGILTNMSTIRQSVKKMNVIN---NKKIDGTYNMM 118 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 +KKERL I+R + KLK+ + I M LP + +VD +E++A++E L IPI+ +VDT Sbjct: 119 SKKERLLIDRLKIKLKKNIGSIYKMNSLPACVIIVDVKKEQIAVKECNNLCIPIIGIVDT 178 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 NS+P +DY IP NDDSS+SI L + ++ +GI Sbjct: 179 NSDPRNIDYPIPANDDSSKSINLILSYITNSINEGI 214 >gi|308189983|ref|YP_003922914.1| 30S ribosomal protein S2 [Mycoplasma fermentans JER] gi|307624725|gb|ADN69030.1| 30S ribosomal protein S2 [Mycoplasma fermentans JER] Length = 330 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 138/215 (64%), Gaps = 3/215 (1%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG-- 66 +LLE+G FGH+ +WNP+M+ ++ + + H+I+ + T+ L+ +++ +A+ Sbjct: 25 KLLEAGTYFGHKASMWNPRMKEFLLPQPKRGVHVINSNFTLQRLEFIYNLLNKFLAKNPH 84 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV TK QA + + + A R+ Y V +WLGG +TN T+ + ++ + +LE K Sbjct: 85 ASFIFVGTKKQARETIKDNALRTNSYYVTERWLGGTLTNSSTIFKRVKTMEELEAKAAKG 144 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G+TKKE L ++K DKL + L+GIR M GLP M V D N +++A++EAR+ + I+ Sbjct: 145 FEGYTKKEGLLFQKKLDKLHKNLEGIRRMQGLPTFMIVADPNDDEIAVKEARKKGVKIIG 204 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 ++D+N+NPDLVD+ IP NDDS++SI L ++A A Sbjct: 205 ILDSNANPDLVDFGIPANDDSAKSITLIITILADA 239 >gi|161784181|ref|YP_001595497.1| ribosomal protein S2 [Lemna minor] gi|209573608|sp|A9L985|RR2_LEMMI RecName: Full=30S ribosomal protein S2, chloroplastic gi|88696759|gb|ABD48484.1| ribosomal protein S2 [Lemna minor] Length = 236 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNP+M +I +R HI +L++T L +A ++ D ++G Sbjct: 10 LEEMLEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADLVASAAIKARCHFVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNS-LPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PD+ D IP NDD+ SI L + + SA IDG Sbjct: 189 CLIDTNCDPDIADISIPANDDAIASIRLILNKLVSAIIDG 228 >gi|17129598|dbj|BAB72237.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R THI +L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGTHITNLTRTARFLSEACNLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+ V AA ++ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAAGSVARAAIKARCHFVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKIGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ +K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 FNR-LSKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|17129592|dbj|BAB72234.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573640|dbj|BAD04071.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573644|dbj|BAD04073.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573646|dbj|BAD04074.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573648|dbj|BAD04075.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 FNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|39573642|dbj|BAD04072.1| ribosomal protein subunit 2 [Cistanche deserticola] Length = 245 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTRKWNPKMALYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 FNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|299890917|gb|ADJ57416.1| 30S ribosomal protein S2 [uncultured prymnesiophyte C19847] Length = 215 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 15/222 (6%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +LL++GV FGH++ WNPKM YI+ E+N H+IDL QT +L A + + G Sbjct: 5 TLGELLDAGVHFGHQSSRWNPKMFPYIYTEQNGIHVIDLVQTARLLTHAYNYVQKAASEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 LF+ TK QA++ + E A + Y VN +WLGG++TNW TV ++ L+ L + +E Sbjct: 65 KTFLFIGTKRQAANIIAEEANKCNAYYVNHRWLGGILTNWSTVQGRVEYLKTLNK--KEE 122 Query: 127 NQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N F KKE + R +KL++ PD+ VVD RE A+ E R+L I Sbjct: 123 NGEFAKLPKKEAALLRRVHEKLRQN----------PDIAIVVDPKREATAVAECRKLGIT 172 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I++++DTN +P++VD IP NDD+ RSI L ++SA I G Sbjct: 173 IISILDTNCDPNVVDIPIPANDDAVRSIKLILSTLSSAVISG 214 >gi|292559499|ref|YP_003540920.1| 30S ribosomal protein S2 [Phoenix dactylifera] gi|290790907|gb|ADD63162.1| 30S ribosomal protein S2 [Phoenix dactylifera] gi|294620566|gb|ADF28135.1| 30S ribosomal protein S2 [Phoenix dactylifera] Length = 236 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 131/223 (58%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L + ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTRTARFLSETCDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 67 RGKNFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + K N +K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L I Sbjct: 127 MGKLN-CLSKRDAAMLKRKLSTLQTYLGGIKYMAGLPDIVIIVDQQEEYTALRECVILGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|61215529|sp|Q6F0Q4|RS2_MESFL RecName: Full=30S ribosomal protein S2 Length = 266 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 88/229 (38%), Positives = 142/229 (62%), Gaps = 7/229 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + T +L +GVQ+GH+ WNPKM +I+ ++ H+IDL +T+ L++A +++ Sbjct: 1 MAYKEVTRDELSAAGVQYGHQTKRWNPKMAPFIYGSKSKNHVIDLEKTLIQLRQAEKLVQ 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A+G ++LFV T+ A V EAA RS Y VN +WLGG +TN+KT+ + I+ L ++E Sbjct: 61 SIGAKGEKVLFVGTRRSAKLAVKEAALRSGNYYVNQRWLGGTLTNFKTIVKRIKALWEIE 120 Query: 121 ELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 E E G TKKE++ I +++ L+++L GI+ M LP + VVD +++A++E Sbjct: 121 E---SEKNGQLALRTKKEQILILKEKANLEKSLGGIKQMRKLPAALIVVDPKSDEIAVKE 177 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A +L IP++ + DTN +PD+V IP NDD S+ + + + A DG Sbjct: 178 AIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIMINALVDAFADG 226 >gi|50365378|ref|YP_053803.1| 30S ribosomal protein S2 [Mesoplasma florum L1] gi|50363934|gb|AAT75919.1| 30S ribosomal protein S2 [Mesoplasma florum L1] Length = 283 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 88/229 (38%), Positives = 142/229 (62%), Gaps = 7/229 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + T +L +GVQ+GH+ WNPKM +I+ ++ H+IDL +T+ L++A +++ Sbjct: 18 MAYKEVTRDELSAAGVQYGHQTKRWNPKMAPFIYGSKSKNHVIDLEKTLIQLRQAEKLVQ 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A+G ++LFV T+ A V EAA RS Y VN +WLGG +TN+KT+ + I+ L ++E Sbjct: 78 SIGAKGEKVLFVGTRRSAKLAVKEAALRSGNYYVNQRWLGGTLTNFKTIVKRIKALWEIE 137 Query: 121 ELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 E E G TKKE++ I +++ L+++L GI+ M LP + VVD +++A++E Sbjct: 138 E---SEKNGQLALRTKKEQILILKEKANLEKSLGGIKQMRKLPAALIVVDPKSDEIAVKE 194 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 A +L IP++ + DTN +PD+V IP NDD S+ + + + A DG Sbjct: 195 AIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIMINALVDAFADG 243 >gi|114107035|ref|YP_740191.1| ribosomal protein S2 [Liriodendron tulipifera] gi|122233822|sp|Q0G9N0|RR2_LIRTU RecName: Full=30S ribosomal protein S2, chloroplastic gi|113200983|gb|ABI32498.1| ribosomal protein S2 [Liriodendron tulipifera] Length = 236 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ K Sbjct: 70 NFLLVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQKTGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECLTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|26554414|ref|NP_758348.1| 30S ribosomal protein S2 [Mycoplasma penetrans HF-2] gi|81747387|sp|Q8EUG1|RS2_MYCPE RecName: Full=30S ribosomal protein S2 gi|26454424|dbj|BAC44752.1| ribosomal protein S2 [Mycoplasma penetrans HF-2] Length = 367 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 88/226 (38%), Positives = 137/226 (60%), Gaps = 11/226 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV--- 63 ++ +L+E+G G WNPKM+++I+ ++ N HIIDL TV L A + D V Sbjct: 104 SVNKLMETGAHIGLTTRKWNPKMKKFIYTKKGNNHIIDLLHTVISLNVAYNFLLDLVKAN 163 Query: 64 --ARGGRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +L V T+ + + V E AKRS + +N +WLGG +TN+ T+++S+ K +L Sbjct: 164 SNSESSPVLIVGTRGKTIKNHVKEQAKRSHAFYINERWLGGTLTNFSTITKSVAKFNNLI 223 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + N E +TKKE++ +++K +K + GIR M LP ++ + D K+AI+EAR Sbjct: 224 LIHKNGEINKYTKKEQVELKKKTEKYAKYFSGIRTMKELPKVIILTDPEINKIAIKEARN 283 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS----IALFCDLVASA 221 L IP++A+ +TN+NPDLVDYVIP N+ S +S + L CD VA A Sbjct: 284 LGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLLCDAVAEA 329 >gi|254798681|ref|YP_003058331.1| ribosomal protein S2 [Parachlorella kessleri] gi|229915629|gb|ACQ90972.1| ribosomal protein S2 [Parachlorella kessleri] Length = 282 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 139/225 (61%), Gaps = 1/225 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ +++SG+ FGH WNP+M YI+ E+N H++DL QT +L++ L I ++ A Sbjct: 4 KLTLEDMIKSGMHFGHFTHEWNPRMAPYIYGEKNGRHVLDLVQTHYLLKQVLNFIEESAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G LFV TK QA+ + + A + VN +WLGGM+TNW+T+ +S++KL + + Sbjct: 64 QGKTFLFVGTKKQAAPLIAKTALACNSFYVNQRWLGGMLTNWRTIQKSLRKLDEYRQAEQ 123 Query: 125 KENQGFTKKERL-NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + F KK+ + +R++ +L++ L G+ +M LP ++ ++ E A++E R+L IP Sbjct: 124 RGDWNFLKKQEVARKKREKQRLEKYLAGLENMNQLPGVVIIIGQPEEIHAVRECRQLAIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 + ++D+N +P L D+ IP NDDS ++ + DL ++ + G R Sbjct: 184 TITLLDSNCDPTLADWYIPANDDSVSALRVILDLFENSILSGQTR 228 >gi|149390431|ref|YP_001294259.1| ribosomal protein S2 [Illicium oligandrum] gi|209573606|sp|A6MMT3|RR2_ILLOL RecName: Full=30S ribosomal protein S2, chloroplastic gi|147917384|gb|ABQ52508.1| ribosomal protein S2 [Illicium oligandrum] Length = 236 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 130/223 (58%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARSLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG L V TK +A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 67 RGKHFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMLTNWFTTETRLHKFRDLRAEQK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + N+ K++ ++RK L+ L GI+ M GLPD++ ++D E AI+E L I Sbjct: 127 TGRLNR-LPKRDAAMLKRKLSHLQAYLGGIKYMTGLPDIVIIIDQQEEYTAIRECATLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADIPIPANDDAIASIRLILNKLVSAICEG 228 >gi|195928813|gb|ACG56086.1| ribosomal protein subunit 2 [Agalinis tenuifolia] Length = 211 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|195928691|gb|ACG56025.1| ribosomal protein subunit 2 [Agalinis auriculata] gi|195928693|gb|ACG56026.1| ribosomal protein subunit 2 [Agalinis auriculata] gi|195928733|gb|ACG56046.1| ribosomal protein subunit 2 [Agalinis heterophylla] gi|195928735|gb|ACG56047.1| ribosomal protein subunit 2 [Agalinis heterophylla] gi|195928751|gb|ACG56055.1| ribosomal protein subunit 2 [Agalinis navasotensis] gi|195928753|gb|ACG56056.1| ribosomal protein subunit 2 [Agalinis navasotensis] gi|195928817|gb|ACG56088.1| ribosomal protein subunit 2 [Agalinis tenuifolia] Length = 218 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|139388899|ref|YP_001123626.1| ribosomal protein S2 [Lepidium virginicum] gi|209573610|sp|A4QL95|RR2_LEPVR RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286829|dbj|BAF50450.1| ribosomal protein S2 [Lepidium virginicum] Length = 236 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 133/221 (60%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL ++ Sbjct: 70 QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRT--EQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +GF K++ ++R+ +LK L GI+ M GLPD++ ++D E A++E L IP Sbjct: 128 EGFNRLPKRDAAVLKRQLSRLKTYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN NPDL D IP NDD+ SI + + A +G Sbjct: 188 ISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAIGEG 228 >gi|159161149|ref|YP_001542436.1| ribosomal protein S2 [Ceratophyllum demersum] gi|209573641|sp|A8SE74|RR2_CERDE RecName: Full=30S ribosomal protein S2, chloroplastic gi|148508432|gb|ABQ81439.1| ribosomal protein S2 [Ceratophyllum demersum] Length = 236 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D + AA+++ + VN KWLGGM TNW T +QK RDL E+ + Sbjct: 70 HFLIVGTKNKAADLIASAARKARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ +R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 FNH-LPKRDAAMFKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTNS+PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|114804254|ref|YP_762250.1| ribosomal protein S2 [Morus indica] gi|122166816|sp|Q09X28|RR2_MORIN RecName: Full=30S ribosomal protein S2, chloroplastic gi|78100306|gb|ABB20947.1| ribosomal protein S2 [Morus indica] Length = 236 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 131/219 (59%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++G+ FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMDAGIHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V +AA ++ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADSVAQAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A+QE LRIP + Sbjct: 130 LKRLPKRDAAVLKRQISHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALQECITLRIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|323149071|ref|YP_004222635.1| ribosomal protein S2 [Anthriscus cerefolium] gi|289645564|gb|ADD13627.1| ribosomal protein S2 [Anthriscus cerefolium] Length = 236 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 131/219 (59%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMKAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADLVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 Q K++ ++R+ L+ L GI+ M GLPD++ ++D + E A+QE L IP ++ Sbjct: 130 LQSLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQHEEYTALQECITLGIPTIS 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAISSIRLILNKLVFAIREG 228 >gi|290487174|gb|ADD29971.1| ribosomal protein S2 [Oxalis latifolia] Length = 236 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISTKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 R L V TK++A+D V AA R+ + VN KWLGG++TNW T + K RDL E+ + Sbjct: 70 RFLIVGTKNKAADLVTRAAIRARCHYVNKKWLGGILTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L R L GI+ M GLPD++ +VD E +A++E L IP + Sbjct: 130 INR-LPKRDAAMLKRQLSHLHRYLGGIKYMTGLPDIVIIVDQQEEYMALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|57229307|gb|AAW45731.1| ribosomal protein subunit 2 [Euphrasia disjuncta] Length = 214 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LLE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEELLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ Sbjct: 61 RGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L I Sbjct: 121 TGRLNR-LPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P + ++DTN +P+L D IP NDD+ SI L Sbjct: 180 PTICLIDTNCDPNLADISIPANDDAISSIRLI 211 >gi|195928823|gb|ACG56091.1| ribosomal protein subunit 2 [Aureolaria pectinata] gi|195928825|gb|ACG56092.1| ribosomal protein subunit 2 [Aureolaria pedicularia] gi|195928829|gb|ACG56094.1| ribosomal protein subunit 2 [Dasistoma macrophylla] Length = 218 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + Sbjct: 6 EMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQF 65 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKEN 127 L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + N Sbjct: 66 LIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLN 125 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + + Sbjct: 126 R-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICL 184 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALF 214 +DTN +PDL D IP NDD+ SI L Sbjct: 185 IDTNCDPDLADISIPANDDAISSIRLI 211 >gi|139389085|ref|YP_001123803.1| ribosomal protein S2 [Nasturtium officinale] gi|139389631|ref|YP_001123188.1| ribosomal protein S2 [Arabis hirsuta] gi|139389790|ref|YP_001123451.1| ribosomal protein S2 [Crucihimalaya wallichii] gi|209573596|sp|A4QKS0|RR2_CRUWA RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573613|sp|A4QLS2|RR2_NASOF RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573636|sp|A4QK07|RR2_ARAHI RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286386|dbj|BAF50012.1| ribosomal protein S2 [Arabis hirsuta] gi|134286652|dbj|BAF50275.1| ribosomal protein S2 [Crucihimalaya wallichii] gi|134287008|dbj|BAF50627.1| ribosomal protein S2 [Nasturtium officinale] gi|262400802|gb|ACY66291.1| ribosomal protein S2 [Brassica napus] Length = 236 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 133/221 (60%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL ++ Sbjct: 70 QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRT--EQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +GF K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 128 EGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN NPDL D IP NDD+ SI + + A +G Sbjct: 188 ISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|195928827|gb|ACG56093.1| truncated ribosomal protein subunit 2 [Brachystigma wrightii] Length = 209 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 127/207 (61%), Gaps = 3/207 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNH-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIA 212 ++DTN +PDL D IP NDD+ S A Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSFA 209 >gi|45644740|gb|AAS73128.1| predicted 30S ribosomal protein S2 [uncultured marine gamma proteobacterium EBAC20E09] Length = 277 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 130/206 (63%), Gaps = 1/206 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M++YI+ R II+L T L A + D ++G +ILFV TK AS + E A Sbjct: 1 MDQYIYDTRKQISIINLELTQECLSAAASKVEDICSKGNKILFVGTKRSASKTIKEEASN 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRDKLKR 147 ++ +WLGG +TNWKT+ SI++L D+EE+++ KKE + I+++ KL+ Sbjct: 61 IGLPYIDKRWLGGTLTNWKTIRGSIRRLLDIEEMISSGRINKLIKKEAVEIQKEHAKLEA 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 ++ GI+DM GLPD +FV+D EK+A+ EA+++ IPI+A+VDTNS+PD +D +IPGNDD+ Sbjct: 121 SVGGIKDMKGLPDAIFVIDVKYEKIAVLEAKKMGIPIIALVDTNSDPDGIDMIIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYM 233 RSI L +++ A GI ++ Sbjct: 181 IRSIRLITKVISDACARGIESAQGFV 206 >gi|139389939|ref|YP_001123539.1| ribosomal protein S2 [Draba nemorosa] gi|209573602|sp|A4QL08|RR2_DRANE RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286741|dbj|BAF50363.1| ribosomal protein S2 [Draba nemorosa] Length = 236 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 133/221 (60%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL ++ Sbjct: 70 QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRT--EQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +GF K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 128 EGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN NPDL D IP NDD+ SI + + A +G Sbjct: 188 ISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|167041124|gb|ABZ05884.1| putative ribosomal protein S2 [uncultured marine microorganism HF4000_001A02] Length = 281 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 137/228 (60%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + LL +G FGH WNP + +I E+N HII+L +T+ L AL IS Sbjct: 1 MAASKVKFEDLLGTGAHFGHVTRKWNPNYKPFILMEKNGVHIINLDETIRHLDIALNFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D + G LFV TK+QA D V + A R + + V +WLGG +TN+ T+ +SI++L LE Sbjct: 61 DKAKKNGEFLFVGTKNQAKDIVQQEADRCSMFYVVERWLGGTLTNFTTIKKSIKRLHMLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + ++ + TKKE + R+R KL GI+DM LPD + +VD E A++EA L Sbjct: 121 KEGSQIYENQTKKEIQMLNRERIKLSDQHRGIKDMRRLPDAVIIVDAQLESTAVKEAIIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPI+A+VD+N++P ++DY IP NDDS R+I L ++A +D A+ Sbjct: 181 GIPIIAIVDSNTDPTIIDYPIPANDDSIRTIQLIMSVIADTILDSTAK 228 >gi|13518439|ref|NP_084799.1| ribosomal protein S2 [Lotus japonicus] gi|25009142|sp|Q9BBS6|RR2_LOTJA RecName: Full=30S ribosomal protein S2, chloroplastic gi|13358980|dbj|BAB33197.1| ribosomal protein S2 [Lotus japonicus] Length = 236 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 90/221 (40%), Positives = 131/221 (59%), Gaps = 3/221 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 9 TFEEMMEAGVHFGHGTRKWNPKMAPYISMKRKGIHIINLTRTARFLSEACDLVFDAASRG 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLN 124 R L V TK +A+D V AA R+ + VN KWLGGM+TNW T ++K R+L E+ Sbjct: 69 KRFLIVGTKKKAADLVARAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRELRTEQKTG 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K N K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 129 KLN-CLPKRDAAILKRQLSHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 188 ICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|319777265|ref|YP_004136916.1| 30S ribosomal protein s2 [Mycoplasma fermentans M64] gi|238809936|dbj|BAH69726.1| hypothetical protein [Mycoplasma fermentans PG18] gi|318038340|gb|ADV34539.1| 30S ribosomal protein S2 [Mycoplasma fermentans M64] Length = 330 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 137/215 (63%), Gaps = 3/215 (1%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG-- 66 +LLE+G FGH+ +WNP+M+ ++ + + H+I+ + T+ L+ +++ +A+ Sbjct: 25 KLLEAGTYFGHKASMWNPRMKEFLLPQPKRGVHVINSNFTLQRLEFIYNLLNKFLAKNPH 84 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV TK QA + + + A R Y V +WLGG +TN T+ + ++ + +LE K Sbjct: 85 ASFIFVGTKKQARETIKDNALRINSYYVTERWLGGTLTNSSTIFKRVKTMEELEAKAAKG 144 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G+TKKE L ++K DKL + L+GIR M GLP M V D N +++A++EAR+ + I+ Sbjct: 145 FEGYTKKEGLLFQKKLDKLHKNLEGIRRMQGLPTFMIVADPNDDEIAVKEARKKGVKIIG 204 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 ++D+N+NPDLVD+ IP NDDS++SI L ++A A Sbjct: 205 ILDSNANPDLVDFGIPANDDSAKSITLIITILADA 239 >gi|289066829|ref|YP_003434347.1| ribosomal protein S2 [Vigna radiata] gi|259020016|gb|ACV90214.1| ribosomal protein S2 [Vigna radiata] Length = 236 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L +T L ++ ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMSPYISAKRKGIHITNLIRTARFLSESCDLVFDAASGGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK +A+D V AA R+ + VN KWLGGM+TNW T +QK RDL + Sbjct: 70 QFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTKTRLQKFRDLRMQQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 Q F KK+ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 FQSFPKKDAALLKRQLAQLETYLGGIQYMKGLPDIVIIVDQQEEYTALRECITLEIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++DTNS+PDL D IP NDD+ SI L + + A +G +R Sbjct: 190 LIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEGRSR 231 >gi|309322334|ref|YP_003934185.1| ribosomal protein S2 [Cedrus deodara] gi|228017066|gb|ACP51888.1| ribosomal protein S2 [Cedrus deodara] gi|307683260|dbj|BAJ19568.1| ribosomal protein S2 [Cedrus deodara] Length = 234 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/220 (41%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF R +THII+L++T +A + D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTARRDTHIINLAKTARSSSEACDLAFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL E+ + Sbjct: 70 QFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQDTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNR-LPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IP NDD SI L + SA +G Sbjct: 189 CLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEG 228 >gi|195928763|gb|ACG56061.1| ribosomal protein subunit 2 [Agalinis oligophylla] Length = 218 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGHR WNPKM YI +R HI +L++T L + ++ D G Sbjct: 4 LEEMLEAGVHFGHRTKKWNPKMAPYISAKRKGRHITNLTRTARFLSETCDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK A+D V AA R+ +CVN KWLGGM+TNW T +QKLRDL E+ + Sbjct: 64 QFLIVGTKKTAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKLRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|139388083|ref|YP_001123275.1| ribosomal protein S2 [Barbarea verna] gi|209573637|sp|A4QK94|RR2_BARVE RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286474|dbj|BAF50099.1| ribosomal protein S2 [Barbarea verna] Length = 236 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 133/221 (60%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D ++G Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL ++ Sbjct: 70 QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRT--EQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +GF K++ ++R+ +LK L GI+ M GLPD++ ++D E A++E L IP Sbjct: 128 EGFNRLPKRDAAVLKRQLSRLKTYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN NPDL D IP NDD+ SI + + A +G Sbjct: 188 ISLIDTNCNPDLADISIPANDDAIASIRFTLNKLVFAICEG 228 >gi|115605011|ref|YP_784462.1| ribosomal protein S2 [Piper cenocladum] gi|122164373|sp|Q06GS1|RR2_PIPCE RecName: Full=30S ribosomal protein S2, chloroplastic gi|112253740|gb|ABI14461.1| ribosomal protein S2 [Piper cenocladum] Length = 236 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L + ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSETCDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TKS+A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ K Sbjct: 70 HFLIVGTKSKAADLVALAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQRAGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ ++RK L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LN-CLPKRDAAMLKRKLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCDPDLSDISIPANDDAIASIRLILNKLVSALCEG 228 >gi|195928747|gb|ACG56053.1| ribosomal protein subunit 2 [Agalinis linifolia] Length = 218 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEDMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|139387241|ref|YP_001123362.1| ribosomal protein S2 [Capsella bursa-pastoris] gi|209573639|sp|A4QKI1|RR2_CAPBU RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286562|dbj|BAF50186.1| ribosomal protein S2 [Capsella bursa-pastoris] Length = 236 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 133/221 (60%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL ++ Sbjct: 70 QFLIVGTKNKAADLVARAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRT--EQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +GF K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 128 EGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN NPDL D IP NDD+ SI + + A +G Sbjct: 188 ISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|17129594|dbj|BAB72235.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 134/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 FNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|116617097|ref|YP_817471.1| ribosomal protein S2 [Coffea arabica] gi|122153610|sp|A0A324|RR2_COFAR RecName: Full=30S ribosomal protein S2, chloroplastic gi|116242153|gb|ABJ89668.1| ribosomal protein S2 [Coffea arabica] Length = 236 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 134/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKME YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMEPYISAKRKGIHITNLTRTARFLSEACDLVFDAGSRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|195928711|gb|ACG56035.1| ribosomal protein subunit 2 [Agalinis edwardsiana] Length = 217 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPSNDDAISSIRLI 211 >gi|7525022|ref|NP_051048.1| ribosomal protein S2 [Arabidopsis thaliana] gi|139389407|ref|YP_001123104.1| ribosomal protein S2 [Olimarabidopsis pumila] gi|6685912|sp|P56797|RR2_ARATH RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573618|sp|A4QJS2|RR2_OLIPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|5881683|dbj|BAA84374.1| ribosomal protein S2 [Arabidopsis thaliana] gi|134286301|dbj|BAF49928.1| ribosomal protein S2 [Olimarabidopsis pumila] Length = 236 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 133/221 (60%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL ++ Sbjct: 70 QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRT--EQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +GF K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 128 EGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN NPDL D IP NDD+ SI + + A +G Sbjct: 188 ISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|331268166|ref|YP_004347815.1| ribosomal protein S2 [Chlorella variabilis] gi|325296343|gb|ADZ05063.1| ribosomal protein S2 [Chlorella variabilis] Length = 264 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 2/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L + + +++SG+ FGH WNP+M YI+ ERN HI+DL QT +L K L + D Sbjct: 2 LQRVKLEDMIQSGMHFGHSTREWNPRMAPYIYGERNGRHILDLVQTYYLLNKVLAFLEDQ 61 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G LFV TK QA+ + + A Y VN +WLGGM+TNW+T+ +S++KL++ + Sbjct: 62 AAQGKTFLFVGTKQQAAPLIAKTALACESYYVNQRWLGGMLTNWRTIQKSLRKLQEYRQA 121 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KK+ + +R+ +D+L++ L G+ +M LP ++ ++ E A++E R+L Sbjct: 122 EERGDWNLLKKQEIARKRREKDRLEKYLSGVENMSRLPGVVIIIGQTEEIHAVKECRQLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA-DTKSA 240 IP + ++D+N +P L D+ +P NDDS ++ L A G R A TK Sbjct: 182 IPTLTLLDSNCDPGLADWFLPANDDSVSALRLVLGWFQQAVQTGQRRYGEREAAKKTKQK 241 Query: 241 GETVVHSK 248 + V+ + Sbjct: 242 SKQVIRRR 249 >gi|195928723|gb|ACG56041.1| ribosomal protein subunit 2 [Agalinis gattingeri] gi|195928725|gb|ACG56042.1| ribosomal protein subunit 2 [Agalinis gattingeri] gi|195928727|gb|ACG56043.1| ribosomal protein subunit 2 [Agalinis gattingeri] Length = 218 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGIHIPNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L + T +A+D V AA ++ +CV KWLGGM+TNW T ++QK RDL E+ + Sbjct: 64 QFLIIGTTKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETTLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+R L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 +VDTN +PDL D IP NDD+ SI L Sbjct: 183 CLVDTNCDPDLADLPIPANDDARSSIRLI 211 >gi|195928697|gb|ACG56028.1| ribosomal protein subunit 2 [Agalinis heterophylla] Length = 218 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 128/210 (60%), Gaps = 3/210 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T ++ E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 3 TWKRCCEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLN 124 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ Sbjct: 63 KQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTG 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 123 RLNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPT 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 + ++DTN +PDL D IP NDD+ SI L Sbjct: 182 ICLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|150251448|ref|YP_001312181.1| ribosomal protein S2 [Cycas taitungensis] gi|209573600|sp|A6H5F6|RR2_CYCTA RecName: Full=30S ribosomal protein S2, chloroplastic gi|149941498|dbj|BAF64922.1| ribosomal protein S2 [Cycas taitungensis] gi|156597987|gb|ABU85260.1| ribosomal protein S2 [Cycas micronesica] Length = 240 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 130/219 (59%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH+ WNP+M YIF ER HII+L++T L +A ++ D +G Sbjct: 10 LEEMMEAGVHFGHQARKWNPRMAPYIFTERRGIHIINLTRTARFLSEACDLVFDAAGKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL-EELLNKE 126 + V TK QA+D V AA ++ + VN KWLGGM+TNW T +K +DL +E + Sbjct: 70 QFPIVGTKYQAADSVASAAIKARCHYVNKKWLGGMLTNWSTTGTRPRKFKDLKKEQDTGQ 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE ++R+ +L++ L GI+ M LPD++ + D E AI E L IP + Sbjct: 130 SNRLPKKEAAMLKRQLAQLQKYLGGIKYMTSLPDIVIIADQQEESTAIGECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDL D IP NDD+ SI L + + S+ +G Sbjct: 190 LVDTDCDPDLTDIPIPANDDARASIRLILNKLTSSICEG 228 >gi|149390257|ref|YP_001294087.1| ribosomal protein S2 [Chloranthus spicatus] gi|209573595|sp|A6MMB1|RR2_CHLSC RecName: Full=30S ribosomal protein S2, chloroplastic gi|146744177|gb|ABQ43249.1| ribosomal protein S2 [Chloranthus spicatus] Length = 236 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA R+ + VN KWLGGM TNW T +QK RDL E+ + + Sbjct: 70 HFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|229577743|ref|YP_002836079.1| ribosomal protein S2 [Megaleranthis saniculifolia] gi|226933871|gb|ACO92004.1| ribosomal protein S2 [Megaleranthis saniculifolia] Length = 236 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V A+ R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVASASIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA ++G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAILEG 228 >gi|156598145|gb|ABU85337.1| ribosomal protein S2 [Elaeis oleifera] Length = 235 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 130/223 (58%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L + ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTRTARFLSETCDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG L V TK++A D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 67 RGKNFLIVGTKNKAVDSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + K N +K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L I Sbjct: 127 MGKLN-CLSKRDAAMLKRKLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|6650148|gb|AAF21742.1|AF055154_1 ribosomal protein subunit 2 [Mimulus aurantiacus] Length = 202 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTXRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|195928767|gb|ACG56063.1| ribosomal protein subunit 2 [Agalinis oligophylla] gi|195928769|gb|ACG56064.1| ribosomal protein subunit 2 [Agalinis oligophylla] Length = 218 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGHR WNPKM YI +R HI +L++T L + ++ D G Sbjct: 4 LEEMLETGVHFGHRTKKWNPKMAPYISAKRKGRHITNLTRTARFLSETCDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK A+D V AA R+ +CVN KWLGGM+TNW T +QKLRDL E+ + Sbjct: 64 QFLIVGTKKTAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKLRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|115604923|ref|YP_784375.1| ribosomal protein S2 [Drimys granadensis] gi|122164452|sp|Q06H08|RR2_DRIGR RecName: Full=30S ribosomal protein S2, chloroplastic gi|112032651|gb|ABH88286.1| ribosomal protein S2 [Drimys granadensis] Length = 236 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFFSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM TNW T + K RDL E+ K Sbjct: 70 HFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLKAEQKAGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECLTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN NPDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCNPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|139390337|ref|YP_001122935.1| ribosomal protein S2 [Aethionema cordifolium] gi|209573631|sp|A4QJA4|RR2_AETCO RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286130|dbj|BAF49759.1| ribosomal protein S2 [Aethionema cordifolium] Length = 236 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 87/223 (39%), Positives = 131/223 (58%), Gaps = 9/223 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-----EL 122 L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL E Sbjct: 70 HFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQKTEG 129 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 LN+ K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L I Sbjct: 130 LNR----LPKRDAAVLKRQFSHLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P ++++DTNSNPDL D IP NDD+ SI + + A +G Sbjct: 186 PTISLIDTNSNPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|227481108|emb|CAP62487.1| ribosomal protein S2 [Ceratophyllum demersum] Length = 236 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D + AA ++ + VN KWLGGM TNW T +QK RDL E+ + Sbjct: 70 HFLIVGTKNKAADLIASAAIKARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ +R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 FNH-LPKRDAAMFKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTNS+PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|78103242|ref|YP_358565.1| ribosomal protein S2 [Phalaenopsis aphrodite subsp. formosana] gi|122239296|sp|Q3BAQ3|RR2_PHAAO RecName: Full=30S ribosomal protein S2, chloroplastic gi|58802772|gb|AAW82492.1| ribosomal protein S2 [Phalaenopsis aphrodite subsp. formosana] Length = 236 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+G+ FGH WNP+M YI +R HI +L+ T L +A ++ D +RG Sbjct: 10 LEEMMEAGIHFGHVTNKWNPRMAPYISSKRKGIHITNLTITARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 R L V TK +A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 RFLIVGTKKKAADLVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K + ++RK L+ L GI+ M GLPD++ +VD E ++E L IP + Sbjct: 130 LNR-LPKGDAAMLKRKLSTLQAYLGGIKYMTGLPDIVIIVDQQEEYTVLRECVILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEG 228 >gi|68164792|ref|YP_247588.1| ribosomal protein S2 [Cucumis sativus] gi|75317328|sp|Q4VZP4|RR2_CUCSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|67511387|emb|CAJ00747.1| ribosomal protein S2 [Cucumis sativus] gi|74027090|gb|AAZ94640.1| ribosomal protein S2 [Cucumis sativus] gi|115432793|gb|ABI97406.1| ribosomal protein S2 [Cucumis sativus] gi|115498292|gb|ABI98734.1| ribosomal protein S2 [Cucumis sativus] Length = 236 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAATRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 70 QFLIVGTKNKAADSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ +R+ L+ L GI+ M GLPD++ +VD E A+QE L IP + Sbjct: 130 LNR-LPKRDAAMFKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAISEG 228 >gi|195928765|gb|ACG56062.1| ribosomal protein subunit 2 [Agalinis oligophylla] Length = 217 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGHR WNPKM YI +R HI +L++T L + ++ D G Sbjct: 4 LEEMLETGVHFGHRTKKWNPKMAPYISAKRKGRHITNLTRTARFLSETCDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK A+D V AA R+ +CVN KWLGGM+TNW T +QKLRDL E+ + Sbjct: 64 QFLIVGTKKTAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKLRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|39573650|dbj|BAD04076.1| ribosomal protein subunit 2 [Cistanche deserticola] Length = 245 Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 FNR-LPKRDAAVVKRQLSRLQTYFGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|313183942|ref|YP_004021796.1| ribosomal protein S2 [Equisetum arvense] gi|281371662|gb|ADA63595.1| ribosomal protein S2 [Equisetum arvense] Length = 235 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 87/222 (39%), Positives = 134/222 (60%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++++GV FGH+ WNPKM YIF ++ HI++L+QT L +A ++ + G Sbjct: 10 LEDMMKAGVHFGHQVQKWNPKMAPYIFTQQKGVHILNLTQTARFLSEACDLLFNAANEGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V T Q SD V AA ++ + VN KWLGGM+TNW T+ +L++ EEL K+N Sbjct: 70 QFMVVGTDQQVSDLVKLAASKARCHYVNQKWLGGMLTNWSTIE---TRLQEFEELEKKQN 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G F K+E +++ L++ L GI+ M LPD++ +V+ +E AI+E R L IP Sbjct: 127 LGGLHRFPKREAAVAKKQLSSLQKYLGGIKYMTTLPDIVIIVNQQKELTAIKECRILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDT+ NPDLVD IP NDD+ S+ + +ASA +G Sbjct: 187 TICIVDTDCNPDLVDIPIPANDDARSSVRWILNELASAIREG 228 >gi|195928701|gb|ACG56030.1| ribosomal protein subunit 2 [Agalinis strictifolia] gi|195928801|gb|ACG56080.1| ribosomal protein subunit 2 [Agalinis strictifolia] Length = 217 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 127/206 (61%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGKHITNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T+ +A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLLVGTQKKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD+ SI Sbjct: 183 CLIDTNCDPDLADLPIPANDDARSSI 208 >gi|260060692|ref|YP_003193772.1| 30S ribosomal protein S2 [Robiginitalea biformata HTCC2501] gi|88784822|gb|EAR15991.1| 30S ribosomal protein S2 [Robiginitalea biformata HTCC2501] Length = 389 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 5/211 (2%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI+ ERN H+I+L +TV L +A + + A G +ILFVATK QA D V + Sbjct: 1 MAPYIYMERNGIHVINLYKTVAKLDEAGEALKKIAASGRKILFVATKKQAKDIVAQKVAE 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKL 145 + +W GGM+TN+ T+ ++++K+ ++ + K++ F +KKERL ++R R KL Sbjct: 61 VNMPYITERWPGGMLTNFVTIRRAVKKMASIDRM--KKDGTFNTLSKKERLQVDRLRAKL 118 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGND 205 ++ L I DM LP +FVVDT RE +A++EA++L IPI A+VDTNS+P +D+VIP ND Sbjct: 119 EKNLGSIADMTRLPGALFVVDTMREHIAVKEAQKLNIPIFAMVDTNSDPRPIDFVIPAND 178 Query: 206 DSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 D+S+SI + V DG+A + S A+ Sbjct: 179 DASKSIEVIMSQVTQFVADGLAERKSEKSAE 209 >gi|195928739|gb|ACG56049.1| ribosomal protein subunit 2 [Agalinis homalantha] Length = 218 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK+QA+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNQAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|195928815|gb|ACG56087.1| ribosomal protein subunit 2 [Agalinis tenuifolia] Length = 204 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 126/202 (62%), Gaps = 3/202 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDS 207 ++DTN +PDL D IP NDD+ Sbjct: 183 CLIDTNCDPDLADISIPANDDA 204 >gi|290487182|gb|ADD29975.1| ribosomal protein S2 [Trochodendron aralioides] Length = 236 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E+ + + Sbjct: 70 EFLIVGTKNKAADSVASAAIRARSHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LGR-LPKRDAAMLKRQLSHLQAYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|195928737|gb|ACG56048.1| ribosomal protein subunit 2 [Agalinis homalantha] Length = 217 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK+QA+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNQAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|290487140|gb|ADD29954.1| ribosomal protein S2 [Ehretia acuminata] Length = 236 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAARRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLFRLQTYLGGIQYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|290487148|gb|ADD29958.1| ribosomal protein S2 [Nelumbo nucifera] Length = 236 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM TNW T +QK RDL E+ + Sbjct: 70 QFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQKAGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLFNLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLISAICEG 228 >gi|306486201|gb|ADM92742.1| ribosomal protein S2 [Franklinia alatamaha] Length = 235 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLGDISIPANDDAIASIRLILNKLVFAICEG 228 >gi|197294115|ref|YP_002149736.1| ribosomal protein S2 [Cicer arietinum] gi|197089803|gb|ACH41073.1| ribosomal protein S2 [Cicer arietinum] Length = 236 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 131/223 (58%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NITFEEMMEAGVHFGHDTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG + L V TK +A+D V AA R+ + VN KWLGGM+TNW T ++K RDL E+ Sbjct: 67 RGKQFLIVGTKKKAADSVTRAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K N K++ ++R+ L+ L GI+ M LPD++ +VD + A++E L I Sbjct: 127 TGKPN-SLPKRDAAMLKRQLSHLETYLGGIKYMTRLPDIVIIVDQQEDYTALRECITLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTNS+PDL D IP NDD+ SI L + + A +G Sbjct: 186 PTICLIDTNSDPDLADIPIPANDDAIASIRLILNKLVFAICEG 228 >gi|313199692|ref|YP_004021306.1| ribosomal protein S2 [Theobroma cacao] gi|309321256|gb|ADO64799.1| ribosomal protein S2 [Theobroma cacao] gi|328924773|gb|ADO64879.2| ribosomal protein S2 [Theobroma cacao] Length = 236 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D ++G Sbjct: 10 LEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V+ AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVVRAAIRARCHYVNKKWLGGMLTNWPTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVVAICEG 228 >gi|72080397|ref|YP_287455.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 7448] Length = 300 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 142/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 16 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA V E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 76 AQKGAKFIFVGTKKQAKKVVEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 135 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 136 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 195 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A Sbjct: 196 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADA 237 >gi|114329735|ref|YP_740554.1| ribosomal protein S2 [Platanus occidentalis] gi|122166046|sp|Q09G57|RR2_PLAOC RecName: Full=30S ribosomal protein S2, chloroplastic gi|114054373|gb|ABI49767.1| ribosomal protein S2 [Platanus occidentalis] Length = 236 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAR 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 RG R L V TK++ D V AA R+ + VN KWLGGM TNW T + K RDL E+ Sbjct: 67 RGKRFLIVGTKNKVVDLVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + N K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L I Sbjct: 127 AGRLNH-LPKRDAAMLKRQLSHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADISIPANDDAIASIRLVLNKLVSAICEG 228 >gi|209573702|sp|Q4A8V7|RS2_MYCH7 RecName: Full=30S ribosomal protein S2 gi|144575261|gb|AAZ53432.2| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 7448] Length = 318 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 142/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 34 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 93 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA V E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 94 AQKGAKFIFVGTKKQAKKVVEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 153 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 154 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 213 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A Sbjct: 214 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADA 255 >gi|114107122|ref|YP_740106.1| ribosomal protein S2 [Daucus carota] gi|122227489|sp|Q0G9X3|RR2_DAUCA RecName: Full=30S ribosomal protein S2, chloroplastic gi|113200897|gb|ABI32413.1| ribosomal protein S2 [Daucus carota] Length = 236 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 131/219 (59%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMKAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADLVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + K++ ++R+ L+ L GI+ M GLPD++ ++D + E A+QE L IP ++ Sbjct: 130 LRRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQHEEYTALQECITLGIPTIS 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAISSIRLILNKLVFAIREG 228 >gi|10179714|gb|AAG13849.1| ribosomal protein subunit 2 [Barleria prionitis] Length = 202 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISARRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA R+ +CVN KWLGGM+TNW T + + RDL E+ + N+ K Sbjct: 61 KNKAADSVARAAIRARCHCVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMAGLPDIVIIVDQHEEYTALRECLTLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734685|gb|AAB93694.1| ribosomal protein subunit 2 [Pedicularis foliosa] Length = 199 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 124/199 (62%), Gaps = 3/199 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKMGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSI 211 +PDL D IP NDD+ SI Sbjct: 180 DPDLADISIPSNDDAISSI 198 >gi|31580934|dbj|BAC77570.1| ribosomal protein S2 [Nicotiana tomentosiformis] Length = 236 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADLVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 YLTDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|10179726|gb|AAG13855.1| ribosomal protein subunit 2 [Globularia cordifolia] Length = 202 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA R+ +CVN KWLGGM+TNW T + K RDL E+ + + N+ K Sbjct: 61 KNKAADSVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVLKRQLSRLQTYLGGIQYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|71893410|ref|YP_278856.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae J] Length = 300 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 142/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 16 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 76 AQKGAKFIFVGTKKQAKKVIEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 135 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 136 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 195 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A Sbjct: 196 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADA 237 >gi|2734651|gb|AAB93678.1| ribosomal protein subunit 2 [Boschniakia hookeri] Length = 204 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + KLRDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|325126854|ref|YP_004286091.1| ribosomal protein S2 [Fragaria vesca subsp. vesca] gi|324022766|gb|ADY15340.1| ribosomal protein S2 [Fragaria vesca subsp. vesca] Length = 236 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAVLKRQLFHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|209573703|sp|Q4AAW8|RS2_MYCHJ RecName: Full=30S ribosomal protein S2 gi|144227445|gb|AAZ44145.2| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae J] Length = 318 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 142/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 34 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 93 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 94 AQKGAKFIFVGTKKQAKKVIEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 153 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 154 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 213 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A Sbjct: 214 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADA 255 >gi|54020008|ref|YP_115572.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 232] gi|81603675|sp|Q601Z3|RS2_MYCH2 RecName: Full=30S ribosomal protein S2 gi|53987181|gb|AAV27382.1| 30s ribosomal protein S2 [Mycoplasma hyopneumoniae 232] Length = 318 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 142/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 34 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 93 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 94 AQKGAKFIFVGTKKQAKKVIEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 153 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 154 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 213 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A Sbjct: 214 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADA 255 >gi|139389253|ref|YP_001123019.1| ribosomal protein S2 [Aethionema grandiflorum] gi|209573632|sp|A4QJI8|RR2_AETGR RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286215|dbj|BAF49843.1| ribosomal protein S2 [Aethionema grandiflorum] Length = 236 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 9/223 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-----EL 122 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL E Sbjct: 70 QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQKTEG 129 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 LN+ K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L I Sbjct: 130 LNR----LPKRDAAVLKRQFSHLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P ++++DTN NPDL D IP NDD+ SI + + A +G Sbjct: 186 PTISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|108802632|ref|YP_636288.1| ribosomal protein S2 [Eucalyptus globulus subsp. globulus] gi|309322440|ref|YP_003933953.1| ribosomal protein S2 [Eucalyptus grandis] gi|122227188|sp|Q49L09|RR2_EUCGG RecName: Full=30S ribosomal protein S2, chloroplastic gi|60460798|gb|AAX21018.1| ribosomal protein S2 [Eucalyptus globulus subsp. globulus] gi|308223274|gb|ADO23582.1| ribosomal protein S2 [Eucalyptus grandis] Length = 236 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKAGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|296936660|gb|ADH94332.1| ribosomal protein S2 [Syzygium cumini] Length = 236 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|10179732|gb|AAG13858.1| ribosomal protein subunit 2 [Catalpa sp. SS-83] Length = 202 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTKKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + N+ K Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTARLNR-LQK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVMKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|167391794|ref|YP_001671672.1| ribosomal protein S2 [Carica papaya] gi|209573640|sp|B1A924|RR2_CARPA RecName: Full=30S ribosomal protein S2, chloroplastic gi|166344121|gb|ABY86771.1| ribosomal protein S2 [Carica papaya] Length = 236 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP + Sbjct: 130 LNR-LPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 SLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|290487150|gb|ADD29959.1| ribosomal protein S2 [Nerium oleander] Length = 236 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMGPYISARRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLSGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|114329957|ref|YP_740639.1| ribosomal protein S2 [Nandina domestica] gi|122165972|sp|Q09FX2|RR2_NANDO RecName: Full=30S ribosomal protein S2, chloroplastic gi|114054459|gb|ABI49852.1| ribosomal protein S2 [Nandina domestica] Length = 236 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 FNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI + + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRFILNKLVSAICEG 228 >gi|306486199|gb|ADM92741.1| ribosomal protein S2 [Davidia involucrata] Length = 236 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + + Sbjct: 70 QFLIVGTKAKAADSVARAALRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LRR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|283794957|ref|YP_003359348.1| ribosomal protein S2 [Olea europaea] gi|330850732|ref|YP_004376410.1| ribosomal protein S2 [Olea europaea subsp. europaea] gi|281428676|gb|ADA69915.1| ribosomal protein S2 [Olea europaea] gi|291059242|gb|ADD72078.1| ribosomal protein S2 [Olea europaea] gi|328795422|emb|CBR30303.1| ribosomal protein S2 [Olea europaea subsp. europaea] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGARKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|2734667|gb|AAB93686.1| ribosomal protein subunit 2 [Harveya purpurea] Length = 201 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTXKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASGGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ TK Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKSGRLNR-LTK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +LK L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLKTYLGGIKYMTGLPDIVIIVDQHEEXTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLXDISIPANDDAISSIRLI 201 >gi|219673977|ref|YP_002456462.1| ribosomal protein S2 [Trifolium subterraneum] gi|193788946|gb|ACF20542.1| ribosomal protein S2 [Trifolium subterraneum] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 134/225 (59%), Gaps = 3/225 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ +++++ V GHR WNP+ME +I +R THII+L +T L +A ++ D + G Sbjct: 9 TLEEMVKARVHLGHRTRKWNPRMEPFILAKRKGTHIINLLRTARFLSEACNLVFDAASGG 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLN 124 + L V TK A D V AA R+ + VN KWLGGM+TNW T ++K RDL E+ Sbjct: 69 KQFLIVGTKKVAVDSVRRAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQKTG 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K N K++ ++R+ L+R L GI+ M GLPD++ ++D E A++E L IP Sbjct: 129 KMN-SLPKRDAARLKRQLSHLERYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++++DTNS+PDL ++ IP NDDS SI + + A +G + Q Sbjct: 188 ISLIDTNSDPDLANFSIPANDDSIDSIRFILNKLVFAICEGRSSQ 232 >gi|94502481|ref|YP_588107.1| ribosomal protein S2 [Helianthus annuus] gi|122244031|sp|Q1KXW9|RR2_HELAN RecName: Full=30S ribosomal protein S2, chloroplastic gi|88656885|gb|ABD47136.1| ribosomal protein S2 [Helianthus annuus] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 130/221 (58%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RDL ++ Sbjct: 70 QFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRT--EQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G + K++ ++R+ L+ L GI+ M GLPD++ +VD + E A+QE L IP Sbjct: 128 GGLSRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 188 ICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|194132099|gb|ACF33353.1| ribosomal protein S2 [Gonystylus bancanus] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + + V TK +A+D V AA R+ + VN KWLGGM+TNW T + + K RDL E+ + + Sbjct: 70 QFVIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTERRLDKFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ R+ +L+ L GI+ M GLPD++ +VD E A++E L IP V Sbjct: 130 LNR-LPKRDAAMFRRQLSRLQTYLGGIQYMTGLPDIVIIVDQQEEYTALRECITLGIPTV 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDALASIRLILNKLVFAICEG 228 >gi|2734659|gb|AAB93682.1| ribosomal protein subunit 2 [Chelone obliqua] Length = 204 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH + WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGHRKWNPKMASYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|113170440|ref|YP_717232.1| Rps2 [Ostreococcus tauri] gi|122222831|sp|Q0P3M3|RR2_OSTTA RecName: Full=30S ribosomal protein S2, chloroplastic gi|112806847|emb|CAL36354.1| Rps2 [Ostreococcus tauri] Length = 226 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 133/211 (63%), Gaps = 6/211 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ +LE+GV FGH++ WNPKM YI+ E+N HI+D+ QT+ L+KA Sbjct: 15 LQSMLEAGVHFGHQSRRWNPKMAPYIYEEKNGIHILDVVQTIGELEKARTAFKS----AK 70 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++FV T+ + + + A ++ VN++W+GG++TNW T++ ++KL L+ L Sbjct: 71 NVIFVGTRPAIAPLIEQVATKTGSNYVNTRWVGGLLTNWTTMTMCLEKLGRLDAQLETAT 130 Query: 128 --QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +GFTKK+ L++ R+R++L++ G+R++ LPDL+ +V E+ A+ E ++L IP + Sbjct: 131 PKKGFTKKDILSLTRERERLEKFFGGLRNLKTLPDLVVIVGQPNERNAVLECQKLNIPTI 190 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 ++D+N +P V Y IP NDDS+RS+A D Sbjct: 191 TLLDSNCDPTFVSYGIPANDDSARSVAFILD 221 >gi|290487162|gb|ADD29965.1| ribosomal protein S2 [Cornus florida] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ESGV FGH WNP+M YI +R HI +L++T L +A ++ D ++G Sbjct: 10 LEEMMESGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ K Sbjct: 70 QFLIVGTKTKAADSVARAALKARCHYVNKKWLGGMLTNWATTETRLHKFRDLRTEQKTGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M G+PD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|6650144|gb|AAF21740.1|AF055152_1 ribosomal protein subunit 2 [Schlegelia parviflora] Length = 202 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|110227068|ref|YP_665547.1| ribosomal protein S2 [Populus alba] gi|134093186|ref|YP_001109488.1| ribosomal protein S2 [Populus trichocarpa] gi|122224633|sp|Q14FG8|RR2_POPAL RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573642|sp|A4GYP7|RR2_POPTR RecName: Full=30S ribosomal protein S2, chloroplastic gi|109945506|dbj|BAE97194.1| ribosomal protein S2 [Populus alba] gi|133712048|gb|ABO36691.1| 30S ribosomal protein S2 [Populus trichocarpa] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/221 (39%), Positives = 131/221 (59%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D +R Sbjct: 10 LKEMLETGVHFGHATRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RDL + ++ Sbjct: 70 QFLIVGTKNKAADPVARAAIRARCHYVNKKWLGGLLTNWSTTEMRLQKFRDLR--MEQKT 127 Query: 128 QG---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K + ++R+ L+ L GI+ M GLPD++ +VD E +A+QE L IP Sbjct: 128 GGIHRLPKGDAARLKRQLFHLQTYLGGIKYMTGLPDIVIIVDQQEEYMALQECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 188 ICLIDTNCDPDLTDISIPANDDAIASIRLILNKLVFAICEG 228 >gi|281190716|ref|YP_003330953.1| ribosomal protein S2 [Parthenium argentatum] gi|269924829|gb|ACZ52702.1| ribosomal protein S2 [Parthenium argentatum] Length = 236 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 70 QFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A+QE L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|195928731|gb|ACG56045.1| ribosomal protein subunit 2 [Agalinis harperi] Length = 218 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R +HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGSHITNLTRTARFLSEACDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ +R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVAKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDARSSIRLI 211 >gi|224831984|gb|ACN67058.1| ribosomal protein subunit 2 [Mimulus tenellus var. tenellus] gi|224831986|gb|ACN67059.1| ribosomal protein subunit 2 [Mimulus szechuanensis] Length = 194 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 83/195 (42%), Positives = 121/195 (62%), Gaps = 3/195 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 +E ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 REAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDS 207 +PDL D IP NDD+ Sbjct: 180 DPDLADISIPANDDA 194 >gi|6650160|gb|AAF21748.1|AF055160_1 ribosomal protein subunit 2 [Hippuris vulgaris] Length = 202 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|7524785|ref|NP_045787.1| ribosomal protein S2 [Chlorella vulgaris] gi|3024553|sp|P56351|RR2_CHLVU RecName: Full=30S ribosomal protein S2, chloroplastic gi|2224378|dbj|BAA57862.1| 30S ribosomal protein S2 [Chlorella vulgaris] Length = 267 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 134/227 (59%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L + + +++SG+ FGH WNP+M YI+ ERN HI+DL QT +L K L + + Sbjct: 2 LQKVKLEDMIQSGMHFGHSTREWNPRMAPYIYGERNGRHILDLVQTYYLLNKVLAFLEEQ 61 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G LFV TK QA+ + + A + VN +WLGGM+TNW+T+ +S++KL++ Sbjct: 62 AAQGKTFLFVGTKQQAAPLIAKTALACESFYVNQRWLGGMLTNWRTIQKSLRKLQEYRRA 121 Query: 123 LNKENQGFTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KK+ + +R+ +D+L++ L G+ +M LP ++ ++ E A++E R+L Sbjct: 122 EERGDWNLLKKQEVARKRREKDRLEKYLSGVENMSRLPGVVILIGQTEEIHAVKECRQLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP V ++D+N +P+L D+ +P NDDS ++ L A G R Sbjct: 182 IPTVTLLDSNCDPNLADWFLPANDDSVSALRLILAWFQQAIQTGQLR 228 >gi|290487136|gb|ADD29952.1| ribosomal protein S2 [Aucuba japonica] Length = 236 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMASYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++ +D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKVADSVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLLDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|6650116|gb|AAF21726.1|AF055138_1 ribosomal protein subunit 2 [Lamourouxia viscosa] Length = 202 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA R+ +CVN KWLGGM+TNW T +QK RDL E+ + N+ K Sbjct: 61 KNKAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|312601023|gb|ADQ90278.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 168] Length = 283 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 83/217 (38%), Positives = 140/217 (64%), Gaps = 4/217 (1%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ +G Sbjct: 4 QKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKFAQKGA 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + +FV TK QA V E A R+ V+ +WLGG +TN +T+ ++ + +LE+ + Sbjct: 64 KFIFVGTKKQAKKVVEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQAAENF 123 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARRLRIPI 184 QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ I I Sbjct: 124 QGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARKKGIKI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + + D+N +P LVD+ IP NDDS++SI L ++A A Sbjct: 184 IGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADA 220 >gi|6650168|gb|AAF21752.1|AF055164_1 ribosomal protein subunit 2 [Kohleria digitaliflora] Length = 202 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA R+ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVASAAIRARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKKGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYLGGIKYMIGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|317046162|ref|YP_004072451.1| ribosomal protein S2 [Corynocarpus laevigata] gi|309252879|gb|ADO60299.1| ribosomal protein S2 [Corynocarpus laevigata] Length = 236 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ + D E A+QE L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIGDQQEEYRALQECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|159106789|ref|YP_001531209.1| ribosomal protein S2 [Cuscuta obtusiflora] gi|209573599|sp|A8W3H9|RR2_CUSOB RecName: Full=Plastid 30S ribosomal protein S2 gi|158142513|gb|ABW20554.1| ribosomal protein S2 [Cuscuta obtusiflora] Length = 236 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 86/223 (38%), Positives = 128/223 (57%), Gaps = 1/223 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +LE+ V GH WNPKM YI +R HII+L++T L +A ++ ++G Sbjct: 10 LEDMLEARVHLGHSTQNWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFYAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RDL K Sbjct: 70 KFLIVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKKGG 129 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP ++ Sbjct: 130 LNNLPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRTLGIPTIS 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++DTN +P+L D IP NDD+ SI + + A G Q Sbjct: 190 LIDTNCDPNLSDIAIPANDDAMASIRFILNKLVFAICQGYFSQ 232 >gi|156573701|gb|ABU85183.1| ribosomal protein S2 [Anethum graveolens] Length = 236 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 129/219 (58%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNPKM YI +R HII+L++T L +A ++ D ++G Sbjct: 10 LEEMMKAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADLVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M GLPD++ ++D + E A+QE L IP + Sbjct: 130 LHRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQHEEYTALQECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAISSIRLILNKLVFAIREG 228 >gi|10179736|gb|AAG13860.1| ribosomal protein subunit 2 [Jovellana sp. DePamphilis 90-3] Length = 202 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 KS+A+ V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + + N+ K Sbjct: 61 KSKAAGSVASAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLYRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734641|gb|AAB93673.1| ribosomal protein subunit 2 [Alectra orobanchoides] Length = 204 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ VVD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIVVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|290487158|gb|ADD29963.1| ribosomal protein S2 [Berberidopsis corallina] Length = 236 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|6650138|gb|AAF21737.1|AF055149_1 ribosomal protein subunit 2 [Pedicularis attollens] Length = 202 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 121/201 (60%), Gaps = 1/201 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLVVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E + K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLKRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALF 214 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPSNDDAISSIRLI 201 >gi|81176240|ref|YP_398319.1| ribosomal protein S2 [Lactuca sativa] gi|75283447|sp|Q56P10|RR2_LACSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|61992024|gb|AAX58145.1| ribosomal protein S2 [Lactuca sativa] gi|78675158|dbj|BAE47584.1| chloroplast 30S ribosomal protein S2 [Lactuca sativa] gi|88656973|gb|ABD47223.1| ribosomal protein S2 [Lactuca sativa] Length = 236 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/222 (38%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RDL ++ Sbjct: 70 QFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLR---TEQK 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G K++ ++R+ L+ L GI+ M GLPD++ +VD + E A+QE L IP Sbjct: 127 TGGLDRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|32480832|ref|NP_862743.1| ribosomal protein S2 [Calycanthus floridus var. glaucus] gi|75297118|sp|Q7YJY1|RR2_CALFG RecName: Full=30S ribosomal protein S2, chloroplastic gi|32399368|emb|CAD28710.1| ribosomal protein S2 [Calycanthus floridus var. glaucus] Length = 236 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/223 (38%), Positives = 128/223 (57%), Gaps = 3/223 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 HINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EEL 122 G L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL E+ Sbjct: 67 IGKHFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K N+ K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L I Sbjct: 127 AGKLNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECLTLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 186 PTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|10179756|gb|AAG13870.1| ribosomal protein subunit 2 [Stachytarpheta dichotoma] Length = 202 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++ +D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKVADSVARAATKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|11465943|ref|NP_054485.1| ribosomal protein S2 [Nicotiana tabacum] gi|28261706|ref|NP_783221.1| ribosomal protein S2 [Atropa belladonna] gi|78102520|ref|YP_358661.1| ribosomal protein S2 [Nicotiana sylvestris] gi|89280624|ref|YP_514841.1| ribosomal protein S2 [Solanum lycopersicum] gi|91208977|ref|YP_538837.1| ribosomal protein S2 [Solanum bulbocastanum] gi|108773119|ref|YP_635628.1| ribosomal protein S2 [Solanum tuberosum] gi|133917|sp|P06355|RR2_TOBAC RecName: Full=30S ribosomal protein S2, chloroplastic gi|75295517|sp|Q7FNT2|RR2_ATRBE RecName: Full=30S ribosomal protein S2, chloroplastic gi|122226194|sp|Q2MIJ8|RR2_SOLBU RecName: Full=30S ribosomal protein S2, chloroplastic gi|122226849|sp|Q3C1H0|RR2_NICSY RecName: Full=30S ribosomal protein S2, chloroplastic gi|122248449|sp|Q2MIB1|RR2_SOLLC RecName: Full=30S ribosomal protein S2, chloroplastic gi|122248896|sp|Q2VEI7|RR2_SOLTU RecName: Full=30S ribosomal protein S2, chloroplastic gi|11814|emb|CAA77345.1| ribosomal protein S2 [Nicotiana tabacum] gi|20068320|emb|CAC88033.1| ribosomal protein S2 [Atropa belladonna] gi|77799547|dbj|BAE46636.1| ribosomal protein S2 [Nicotiana sylvestris] gi|82754618|gb|ABB90032.1| ribosomal protein S2 [Solanum tuberosum] gi|84371884|gb|ABC56202.1| ribosomal protein S2 [Solanum bulbocastanum] gi|84371972|gb|ABC56289.1| ribosomal protein S2 [Solanum lycopersicum] gi|88656793|gb|ABD47046.1| ribosomal protein S2 [Solanum tuberosum] gi|89241660|emb|CAJ32382.1| ribosomal protein S2 [Solanum lycopersicum] gi|225274|prf||1211235J ribosomal protein S2 Length = 236 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLTDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|313183811|ref|YP_004021654.1| ribosomal protein S2 [Prunus persica] gi|309321423|gb|ADO64964.1| ribosomal protein S2 [Prunus persica] Length = 236 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 INR-LPKRDAAVLKRQLFHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|91214144|ref|YP_538766.1| ribosomal protein S2 [Glycine max] gi|122226251|sp|Q2PMT2|RR2_SOYBN RecName: Full=30S ribosomal protein S2, chloroplastic gi|83595745|gb|ABC25126.1| ribosomal protein S2 [Glycine max] Length = 236 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L +T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMSPYISAKRKGIHITNLIRTARFLSEACDLVFDAASEGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA R+ + VN KWLGGM+TNW T +QK RDL ++ + Sbjct: 70 QFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTETRLQKFRDLRMQQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F K++ ++R L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNS-FPKRDAAILKRHLAHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLEIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|195928775|gb|ACG56067.1| ribosomal protein subunit 2 [Agalinis plukenetii] gi|195928777|gb|ACG56068.1| ribosomal protein subunit 2 [Agalinis plukenetii] Length = 218 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 84/210 (40%), Positives = 128/210 (60%), Gaps = 4/210 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L++GVQFGH WNPKM YI+ +R HI +L++TV L +A ++ D + G Sbjct: 4 LKEMLKAGVQFGHETKKWNPKMAPYIYAKRKGIHITNLTRTVHFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDC-VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLN 124 + L V TK +A+ V AA ++ +CV KWLGGM+TNW T +QK RDL E+ Sbjct: 64 QFLIVGTKKKAAPLLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRIEQKTG 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + N K++ ++R+ +L+ L GI+ M GLPD++ +V + E A++E L IP Sbjct: 124 RLNH-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVGQHEEYTALRECITLGIPT 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 + ++DTN +PDL D IP NDD+ SI L Sbjct: 183 ICLIDTNCDPDLADMPIPANDDARSSIRLI 212 >gi|2734699|gb|AAB93701.1| ribosomal protein subunit 2 [Tozzia alpina] Length = 204 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K+ A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNNAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ L+ LDGI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSHLQTYLDGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +P+L D IP NDD+ SI L Sbjct: 180 DPNLADISIPANDDAISSIRLI 201 >gi|10179754|gb|AAG13869.1| ribosomal protein subunit 2 [Halleria lucida] Length = 202 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734643|gb|AAB93674.1| ribosomal protein subunit 2 [Agalinis sp. CWD 90.129] Length = 204 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + N+ K Sbjct: 61 KNKAADLVAWAAXKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734645|gb|AAB93675.1| ribosomal protein subunit 2 [Alectra sessiliflora] Length = 204 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734679|gb|AAB93691.1| ribosomal protein subunit 2 [Melasma scabrum] Length = 202 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|290487142|gb|ADD29955.1| ribosomal protein S2 [Ilex cornuta] Length = 236 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASMGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 KFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|2734639|gb|AAB93672.1| ribosomal protein subunit 2 [Antirrhinum majus] Length = 204 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|6650124|gb|AAF21730.1|AF055142_1 ribosomal protein subunit 2 [Harveya capensis] Length = 202 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASGGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ TK Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNR-LTK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|31580890|dbj|BAC77547.1| ribosomal protein S2 [Nicotiana sylvestris] Length = 222 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADLVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 + DTN +PDL D IP NDD+ SI L Sbjct: 189 CLTDTNCDPDLADISIPANDDAISSIRLI 217 >gi|81301551|ref|YP_398848.1| ribosomal protein S2 [Nicotiana tomentosiformis] gi|122245644|sp|Q33C49|RR2_NICTO RecName: Full=30S ribosomal protein S2, chloroplastic gi|80750910|dbj|BAE47986.1| ribosomal protein S2 [Nicotiana tomentosiformis] Length = 236 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 YLTDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|229915461|gb|ACQ90806.1| ribosomal protein S2 [Oocystis solitaria] Length = 246 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 129/222 (58%), Gaps = 3/222 (1%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +GV FGH+ WNPKM +I+ E+N HIIDL QT L K Q +++ ++G L Sbjct: 1 MVRTGVHFGHQVRKWNPKMAPFIYAEKNGIHIIDLIQTYLYLNKVSQFLTEEASKGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 FV TK Q S + + A + VN +WLGG++TNWKT+ SI KL L+ L + G Sbjct: 61 FVGTKKQVSRLIAKIALNCDSFYVNQRWLGGILTNWKTIKTSISKLNQLQNL---KVTGL 117 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 +KKE N+++++DKL++ L G++ M LPD++ +V E A++E + L I + ++DT Sbjct: 118 SKKEIANLKKQKDKLEKYLGGLKKMSALPDVVIIVGQPDEINAVRECQNLGIRSITLLDT 177 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 + +P L D +P NDDS S+ + A G + Y Sbjct: 178 DCDPSLADLFVPANDDSIASLQFVLNHFLEAIKKGQKKYQEY 219 >gi|2734669|gb|AAB93687.1| ribosomal protein subunit 2 [Hyobanche sanguinea] Length = 204 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNH-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|323149180|ref|YP_004222009.1| ribosomal protein S2 [Coccomyxa sp. C-169] gi|317467236|gb|ADV29857.1| ribosomal protein S2 [Coccomyxa sp. C-169] Length = 221 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 83/219 (37%), Positives = 131/219 (59%), Gaps = 7/219 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++E G+ FGH+ WNPKM YI+ +RN HIIDL QT +++ ++++ ++G L Sbjct: 1 MVEMGLHFGHQARKWNPKMAPYIYTKRNGVHIIDLIQTCVHIKQVASFLTESASQGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 FV TK QA + + A S + VN +WLGGM+TNW T+ SI KL++LE +E G Sbjct: 61 FVGTKKQAGGLIAKTASDSNSFYVNQRWLGGMLTNWSTMKLSIAKLKELEA---RETDGG 117 Query: 130 ---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE ++++++L++ L G++DM LPD++ +V E A++E R+L I + Sbjct: 118 LDRLPKKEAALCKKQKERLEKYLGGVKDMMRLPDVVVIVGQPEEMNAVRECRKLGIRSIT 177 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V+DTN +P + D IP NDDS S+ + + A + G Sbjct: 178 VLDTNCDPTVADLFIPANDDSVTSLRFLLQIFSDAILKG 216 >gi|254706656|ref|ZP_05168484.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 127 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 75/118 (63%), Positives = 97/118 (82%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 FTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL IP+VAV+D Sbjct: 1 FTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGIPVVAVID 60 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 +N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E V Sbjct: 61 SNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVEAPVEP 118 >gi|11497513|ref|NP_054921.1| ribosomal protein S2 [Spinacia oleracea] gi|133916|sp|P08242|RR2_SPIOL RecName: Full=30S ribosomal protein S2, chloroplastic gi|7636094|emb|CAB88714.1| ribosomal protein S2 [Spinacia oleracea] Length = 236 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN NPDL D IP NDD+ SI L + A +G Sbjct: 190 LIDTNCNPDLADISIPANDDAIASIRLILTKLVFAICEG 228 >gi|195928787|gb|ACG56073.1| ribosomal protein subunit 2 [Agalinis purpurea] Length = 218 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKRAADLVAWAAIKTRCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNGDPDLADLSIPANDDARSSIHLI 211 >gi|195928783|gb|ACG56071.1| ribosomal protein subunit 2 [Agalinis purpurea] gi|195928785|gb|ACG56072.1| ribosomal protein subunit 2 [Agalinis purpurea] Length = 218 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKRAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNGDPDLADLSIPANDDARSSIHLI 211 >gi|188036203|pdb|3BBN|B Chain B, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome Length = 231 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG Sbjct: 6 LEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 66 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGR 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 126 LARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTIC 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN NPDL D IP NDD+ SI L + A +G Sbjct: 186 LIDTNCNPDLADISIPANDDAIASIRLILTKLVFAICEG 224 >gi|195928789|gb|ACG56074.1| ribosomal protein subunit 2 [Agalinis purpurea] Length = 216 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKRAADLVAWAAIKTRCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNGDPDLADLSIPANDDARSSIHLI 211 >gi|6650118|gb|AAF21727.1|AF055139_1 ribosomal protein subunit 2 [Macranthera flammea] gi|6650120|gb|AAF21728.1|AF055140_1 ribosomal protein subunit 2 [Orthocarpus bracteosus] gi|6650122|gb|AAF21729.1|AF055141_1 ribosomal protein subunit 2 [Seymeria pectinata] Length = 202 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + N+ K Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|10179752|gb|AAG13868.1| ribosomal protein subunit 2 [Zaluzianskya katharinae] Length = 202 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A +I D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTAXFLSEACDLIFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLFRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734687|gb|AAB93695.1| ribosomal protein subunit 2 [Parentucellia viscosa] Length = 204 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ N+ K Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGTLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +P+L D IP NDD+ SI L Sbjct: 180 DPNLADISIPANDDAISSIRLI 201 >gi|10179742|gb|AAG13863.1| ribosomal protein subunit 2 [Sesamum indicum] Length = 202 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++ +D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKVADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|295086491|emb|CBK68014.1| SSU ribosomal protein S2P [Bacteroides xylanisolvens XB1A] Length = 252 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 85/215 (39%), Positives = 132/215 (61%), Gaps = 2/215 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YIF ERN HIIDL +TV + +A + + G ++LFVATK QA V E A+ Sbjct: 1 MAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVLFVATKKQAKQVVAEKAQS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRDKLKR 147 V +W GGM+TN+ T+ ++++K+ +++L N +K+E L I R+R KL + Sbjct: 61 VNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSNLSKREVLQISRQRAKLDK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L I D+ LP +FV+D +E +A++EA RL IP+ +VDTNS+P VD+VIP NDD+ Sbjct: 121 TLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVDTNSDPSNVDFVIPANDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 ++S+ + D +A I+G+ + + D ++AGE Sbjct: 181 TKSVEVILDACCAAMIEGLEERKAE-KIDMEAAGE 214 >gi|290487172|gb|ADD29970.1| ribosomal protein S2 [Liquidambar styraciflua] Length = 236 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++ +D V AA ++ + VN KWLGGM TNW T + K RDL E+ Sbjct: 70 QFLIVGTKNKVADSVARAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRTEQKTGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNH-FPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|6650136|gb|AAF21736.1|AF055148_1 ribosomal protein subunit 2 [Melampyrum sylvaticum] Length = 202 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADLVVWAAIKARCHCVNKKWLGGMLTNWATTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD E +A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQYEEYMALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +P+L D IP NDD+ SI L Sbjct: 180 DPNLADISIPANDDAISSIRLI 201 >gi|195928819|gb|ACG56089.1| ribosomal protein subunit 2 [Agalinis viridis] gi|195928821|gb|ACG56090.1| ribosomal protein subunit 2 [Agalinis viridis] Length = 217 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGIHITNLTRTARFLSETCNLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTHKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LRKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDARSSIRLI 211 >gi|6650154|gb|AAF21745.1|AF055157_1 ribosomal protein subunit 2 [Myoporum parvifolium] gi|10179744|gb|AAG13864.1| ribosomal protein subunit 2 [Alonsoa unilabiata] gi|10179748|gb|AAG13866.1| ribosomal protein subunit 2 [Buddleja davidii] Length = 202 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|160177565|sp|A7M8Z3|RR2_CUSGR RecName: Full=Plastid 30S ribosomal protein S2 Length = 236 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 127/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +LE+ V GH WNPKM YI +R HII+L++T L +A ++ ++G Sbjct: 10 LEDMLEARVHLGHSTQNWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFYAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RDL K Sbjct: 70 KFLIVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKKGG 129 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP ++ Sbjct: 130 LNNLPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRILGIPTIS 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +P+L D IP NDD+ SI + + A G Sbjct: 190 LIDTNCDPNLSDIAIPANDDAMASIRFILNKLVFAICQG 228 >gi|209573700|sp|Q4A5Z6|RS2_MYCS5 RecName: Full=30S ribosomal protein S2 gi|144575099|gb|AAZ43825.2| 30S ribosomal protein S2 [Mycoplasma synoviae 53] Length = 296 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 90/225 (40%), Positives = 145/225 (64%), Gaps = 2/225 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +LLE+G FGH+ +W+PKM+ +I +R N HIID+ +T L+ A ++ A+G Sbjct: 32 KLLEAGAYFGHKKQMWHPKMKEFIVPKRLNKNAHIIDIVKTQKYLEFAYSLVEKLAAKGV 91 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +FV TK QA V EAA+R+ V+ +WLGG +TN + + +QK+ +L++ + Sbjct: 92 SFIFVGTKRQAKKTVKEAAERTNSLYVSERWLGGTLTNNSVIMKRVQKMNELDKKAEQGF 151 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G+TKKE L ++++ DKL + LDGI++M LP +M V D +K+AIQEA++ +I I+ + Sbjct: 152 KGYTKKEALLLQKQLDKLHQNLDGIKNMRRLPQVMIVTDLVEDKIAIQEAKKKKIKIIGI 211 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 VDTN +P ++D+ IP NDDSS+SI L +++A A ++ Y Sbjct: 212 VDTNVDPTVIDFGIPANDDSSKSINLIVNILADAIAKTQGKKQMY 256 >gi|149390529|ref|YP_001294173.1| ribosomal protein S2 [Buxus microphylla] gi|209573638|sp|A6MM25|RR2_BUXMI RecName: Full=30S ribosomal protein S2, chloroplastic gi|146762274|gb|ABQ45238.1| ribosomal protein S2 [Buxus microphylla] Length = 236 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQKTAR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M LPD++ +VD E AI+E L IP++ Sbjct: 130 LARLPKRDAAMLKRQLSHLQTYLGGIKYMTRLPDIVIIVDQQEEYTAIRECVTLGIPMIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 190 LIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|224831972|gb|ACN67052.1| ribosomal protein subunit 2 [Triaenophora rupestris] gi|224831982|gb|ACN67057.1| ribosomal protein subunit 2 [Triaenophora shennongjiaensis] Length = 194 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 122/195 (62%), Gaps = 3/195 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D+ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDSASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDS 207 +PDL D IP NDD+ Sbjct: 180 DPDLADISIPANDDA 194 >gi|195928773|gb|ACG56066.1| ribosomal protein subunit 2 [Agalinis paupercula] Length = 217 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKRAADLVAWAAIKTRCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNGDPDLADLSIPANDDARSSIHLI 211 >gi|195928771|gb|ACG56065.1| ribosomal protein subunit 2 [Agalinis paupercula] Length = 217 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKRAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNGDPDLADLSIPANDDARSSIHLI 211 >gi|290487146|gb|ADD29957.1| ribosomal protein S2 [Meliosma aff. cuneifolia Moore 333] Length = 236 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASREK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRVEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEG 228 >gi|10179750|gb|AAG13867.1| ribosomal protein subunit 2 [Nemesia strumosa] Length = 202 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734671|gb|AAB93688.1| ribosomal protein subunit 2 [Hemimeris sabulosa] Length = 204 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|39573654|dbj|BAD04078.1| ribosomal protein subunit 2 [Cistanche sinensis] Length = 236 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G Sbjct: 10 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+ V A+ ++ +CV+ KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAAGSVAWASIKARCHCVSKKWLGGMLTNWSTTEMRLHKFRDLRIEQKGGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ +++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPQRDVAAVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYAALRECTILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D +IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADILIPANDDAMSSIRLILNKLVFAICEG 228 >gi|157325519|ref|YP_001468297.1| ribosomal protein S2 [Ipomoea purpurea] gi|209573607|sp|A7Y3B3|RR2_IPOPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|157056747|gb|ABV02337.1| ribosomal protein S2 [Ipomoea purpurea] Length = 236 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L+ T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTGTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V A+ R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARASIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L G++ M GLPD+ +VD ++E A+QE L IP + Sbjct: 130 LNR-LPKRDATILKRQLARLQTYLGGMKYMTGLPDIAIIVDQHKEYTALQECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +P+L D IP NDD+ SI + + A +G Sbjct: 189 CLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEG 228 >gi|10179730|gb|AAG13857.1| ribosomal protein subunit 2 [Tetranema mexicanum] Length = 202 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|132444673|ref|NP_904088.2| ribosomal protein S2 [Amborella trichopoda] gi|209573731|sp|Q70Y11|RR2_AMBTC RecName: Full=30S ribosomal protein S2, chloroplastic Length = 236 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 88/230 (38%), Positives = 133/230 (57%), Gaps = 6/230 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMGAGVHFGHGTRKWNPRMAPYISGKRKGIHITNLTRTARPLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL E+ + + Sbjct: 70 HFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++R+ L+ L GI+ M GLPD++ +VD E AI+E L IP + Sbjct: 130 FKR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDHQEEYTAIRECLTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 ++DTN +PDL D IP NDD+ SI L + + A +G +SY+G+ Sbjct: 189 CLIDTNCDPDLADIPIPANDDAIASIQLILNKLVLAIREG---HYSYLGS 235 >gi|195928687|gb|ACG56023.1| ribosomal protein subunit 2 [Agalinis aphylla] Length = 218 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ G Sbjct: 4 LEEMLEAGVHFGHGIRKWNPKMAPYISAKRKGRHITNLTRTARFLSEACGLVFHAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + + Sbjct: 64 QFLIVGTKKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKMGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADLSIPANDDARSSIRLI 211 >gi|71894428|ref|YP_278536.1| 30S ribosomal protein S2 [Mycoplasma synoviae 53] Length = 270 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/225 (40%), Positives = 145/225 (64%), Gaps = 2/225 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +LLE+G FGH+ +W+PKM+ +I +R N HIID+ +T L+ A ++ A+G Sbjct: 6 KLLEAGAYFGHKKQMWHPKMKEFIVPKRLNKNAHIIDIVKTQKYLEFAYSLVEKLAAKGV 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +FV TK QA V EAA+R+ V+ +WLGG +TN + + +QK+ +L++ + Sbjct: 66 SFIFVGTKRQAKKTVKEAAERTNSLYVSERWLGGTLTNNSVIMKRVQKMNELDKKAEQGF 125 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G+TKKE L ++++ DKL + LDGI++M LP +M V D +K+AIQEA++ +I I+ + Sbjct: 126 KGYTKKEALLLQKQLDKLHQNLDGIKNMRRLPQVMIVTDLVEDKIAIQEAKKKKIKIIGI 185 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 VDTN +P ++D+ IP NDDSS+SI L +++A A ++ Y Sbjct: 186 VDTNVDPTVIDFGIPANDDSSKSINLIVNILADAIAKTQGKKQMY 230 >gi|6650156|gb|AAF21746.1|AF055158_1 ribosomal protein subunit 2 [Selago thunbergii] Length = 202 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|91983981|ref|YP_567065.1| ribosomal protein S2 [Vitis vinifera] gi|122242807|sp|Q0ZJ31|RR2_VITVI RecName: Full=30S ribosomal protein S2, chloroplastic gi|91701639|gb|ABE47523.1| ribosomal protein S2 [Vitis vinifera] Length = 236 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|218176238|ref|YP_002364495.1| ribosomal protein S2 [Festuca arundinacea] gi|215882322|gb|ACJ70752.1| ribosomal protein S2 [Festuca arundinacea] Length = 236 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ DT ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDTASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 F-QHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|91208891|ref|YP_538924.1| ribosomal protein S2 [Gossypium hirsutum] gi|119368488|ref|YP_913176.1| ribosomal protein S2 [Gossypium barbadense] gi|325210919|ref|YP_004285993.1| ribosomal protein S2 [Gossypium thurberi] gi|122232503|sp|Q2L8Z6|RR2_GOSHI RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573603|sp|A0ZZ24|RR2_GOSBA RecName: Full=30S ribosomal protein S2, chloroplastic gi|85687405|gb|ABC73617.1| ribosomal protein S2 [Gossypium hirsutum] gi|119224850|dbj|BAF41236.1| Ribosomal protein S2 [Gossypium barbadense] gi|290775781|gb|ADD62277.1| ribosomal protein S2 [Gossypium thurberi] Length = 236 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D ++G Sbjct: 10 LEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWPTTETRLHKFRDLRTEQKTGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M LPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSRLQTYLGGIKYMTRLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTNS+PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNSDPDLADISIPANDDAIASIRLILNKLVVAICEG 228 >gi|195928713|gb|ACG56036.1| ribosomal protein subunit 2 [Agalinis fasciculata] Length = 204 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAARSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKKRAADLVAWAAIKARCHCVKKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDS 207 ++DTN +PDL D IP NDD+ Sbjct: 183 CLIDTNGDPDLADLSIPANDDA 204 >gi|295311721|ref|YP_003587457.1| ribosomal protein S2 [Oncidium Gower Ramsey] gi|254833098|gb|ACT83101.1| ribosomal protein S2 [Oncidium Gower Ramsey] Length = 236 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 127/220 (57%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L+ T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTNKWNPRMAPYISAKRKGIHITNLTITARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA R+ + VN K LGGM+TNW T +QK RDL E+ + K Sbjct: 70 KFLIVGTKKKAADLVASAAIRARCHYVNKKCLGGMLTNWSTTETRLQKFRDLRAEQKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K + ++RK L+ L GI+ M GLPD++ +VD E ++E L IP + Sbjct: 130 LNC-LPKGDAAMLKRKLSTLQAYLGGIKYMTGLPDIVIIVDQQEEYTVLRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + SA +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEG 228 >gi|165910453|gb|ABY73981.1| ribosomal protein S2 [Cuscuta gronovii] Length = 202 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 5/204 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 MLEARVHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RDL + ++ G Sbjct: 61 IVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLR--MEQKTGGL 118 Query: 131 T---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KKE ++RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + + Sbjct: 119 NNIPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICL 178 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSI 211 +DTN +P+L D IP NDD+ SI Sbjct: 179 IDTNCDPNLSDTAIPANDDAIASI 202 >gi|118430295|ref|YP_874729.1| ribosomal protein S2 [Agrostis stolonifera] gi|209573633|sp|A1EA01|RR2_AGRST RecName: Full=30S ribosomal protein S2, chloroplastic gi|118201204|gb|ABK79573.1| ribosomal protein S2 [Agrostis stolonifera] Length = 236 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 F-QHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|10179746|gb|AAG13865.1| ribosomal protein subunit 2 [Aptosimum sp. KES PCR3] Length = 202 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKRGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|159106857|ref|YP_001531276.1| ribosomal protein S2 [Lolium perenne] gi|209573611|sp|A8Y9G3|RR2_LOLPR RecName: Full=30S ribosomal protein S2, chloroplastic gi|158934391|emb|CAO85969.1| ribosomal protein S2 [Lolium perenne] Length = 236 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D ++G Sbjct: 10 LKEMVEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 F-QHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|165910471|gb|ABY73990.1| ribosomal protein S2 [Cuscuta umbellata] Length = 197 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 120/199 (60%), Gaps = 5/199 (2%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V GH WNPKM YI +RN HII+L +T L +A ++ D +RG + L V T Sbjct: 1 VHLGHSTRNWNPKMAPYISAKRNGIHIINLIRTARFLSEACDLVFDAASRGKKFLIVGTN 60 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG---FTK 132 + A + V A+ R+ + VN KWLGGM+TNW T +Q RDL+ L ++ G TK Sbjct: 61 NAADEAVARASIRARCHYVNKKWLGGMLTNWSTTETRLQTFRDLK--LEQKKGGLKNLTK 118 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 KE +RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP + ++DTN Sbjct: 119 KEATIFKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKESTALQECRTLGIPTICLIDTNC 178 Query: 193 NPDLVDYVIPGNDDSSRSI 211 +P+L D IP NDD+ SI Sbjct: 179 DPNLSDIAIPANDDAIASI 197 >gi|2734665|gb|AAB93685.1| ribosomal protein subunit 2 [Euphrasia sp.] Length = 204 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +P+L D IP NDD+ SI L Sbjct: 180 DPNLADISIPANDDAISSIRLI 201 >gi|6650162|gb|AAF21749.1|AF055161_1 ribosomal protein subunit 2 [Hemiphragma heterophyllum] Length = 202 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 119/201 (59%), Gaps = 1/201 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLDRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALF 214 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLI 201 >gi|290487166|gb|ADD29967.1| ribosomal protein S2 [Ficus sp. Moore 315] Length = 236 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMDAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V +A ++ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADSVAQAGIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LKRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|6650126|gb|AAF21731.1|AF055143_1 ribosomal protein subunit 2 [Orobanche fasciculata] Length = 202 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 125/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI++L++T L +A ++ D+ RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIMNLTRTARCLSEACNLVFDSAGRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + + K R+L E+ K N K Sbjct: 61 KNKAADLVAGAAIKARCHCVNKKWLGGMLTNWSTTEKRLHKFRNLRMEQKKGKINL-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L G++ M GLPD++ +VD + E +A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGMKYMTGLPDIVIIVDQHEEYMALRECITLVIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ S+ L Sbjct: 180 DPDLADISIPANDDAISSLRLI 201 >gi|11467185|ref|NP_043018.1| ribosomal protein S2 [Zea mays] gi|133910|sp|P16037|RR2_MAIZE RecName: Full=30S ribosomal protein S2, chloroplastic gi|12409|emb|CAA36512.1| ribosomal protein S2 (AA 1-236) [Zea mays] gi|12483|emb|CAA35198.1| unnamed protein product [Zea mays] gi|902215|emb|CAA60279.1| ribosomal protein S2 [Zea mays] Length = 236 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA RS + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRSRCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A+QE L IP + Sbjct: 130 FHH-LPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALQECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAISEG 228 >gi|290487160|gb|ADD29964.1| ribosomal protein S2 [Bulnesia arborea] Length = 236 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI+++++T L +A ++ D ++G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMGPYISAKRKGIHILNITRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA +S + VN KW GGM+TNW T + K RDL ++ + + Sbjct: 70 QFLIVGTKTKAADLVARAAIKSRSHYVNKKWPGGMLTNWSTTETRLHKFRDLRMKQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRKLSHLQTYLGGIQYMKGLPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|34481618|emb|CAD45096.2| ribosomal protein S2 [Amborella trichopoda] Length = 275 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 88/230 (38%), Positives = 133/230 (57%), Gaps = 6/230 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 49 LEEMMGAGVHFGHGTRKWNPRMAPYISGKRKGIHITNLTRTARPLSEACDLVFDAASRGK 108 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL E+ + + Sbjct: 109 HFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQKMGR 168 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++R+ L+ L GI+ M GLPD++ +VD E AI+E L IP + Sbjct: 169 FKR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDHQEEYTAIRECLTLGIPTI 227 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 ++DTN +PDL D IP NDD+ SI L + + A +G +SY+G+ Sbjct: 228 CLIDTNCDPDLADIPIPANDDAIASIQLILNKLVLAIREG---HYSYLGS 274 >gi|195928729|gb|ACG56044.1| ribosomal protein subunit 2 [Agalinis harperi] Length = 218 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI R HI +L++T L + ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISASRKGIHITNLTRTARFLSETCDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T +A+ V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTTKKAAYLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHQEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|108773335|ref|YP_635890.1| ribosomal protein S2 [Oltmannsiellopsis viridis] gi|122238314|sp|Q20EV5|RR2_OLTVI RecName: Full=30S ribosomal protein S2, chloroplastic gi|82541917|gb|ABB81958.1| ribosomal protein S2 [Oltmannsiellopsis viridis] Length = 238 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 134/222 (60%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I ++++ G+ FGH++ WNPKM +I+ ERN HIIDL QT L++ Q ++++ A G Sbjct: 4 SIEEMVQVGMHFGHQSRKWNPKMAPFIYTERNGIHIIDLIQTHAYLKQVSQFLTESSAAG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QAS + + A + VN +WLGGM+TNWKT+ SI+KL + + ++ Sbjct: 64 KTILFVGTKKQASGLIAKVALQCNSPYVNQRWLGGMLTNWKTIQTSIKKLNEFD--YQEK 121 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF +K+E +++ +L++ L G++ M +PD++ +V E A+ E RRL I Sbjct: 122 TGGFDLLSKQEAAQARKEKARLQKYLGGMKHMTTIPDVVVIVGQPDELNAVAECRRLGIR 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V ++DT+ +P L D +P NDDS SI L + ++G Sbjct: 182 SVTILDTDCDPSLADLFVPANDDSVASIQLILTEFLRSILNG 223 >gi|6650142|gb|AAF21739.1|AF055151_1 ribosomal protein subunit 2 [Lindenbergia philippensis] Length = 202 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|10179740|gb|AAG13862.1| ribosomal protein subunit 2 [Proboscidea louisianica] Length = 202 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PD+ D IP NDD+ SI L Sbjct: 180 DPDVADISIPANDDAISSIRLI 201 >gi|224831962|gb|ACN67047.1| ribosomal protein subunit 2 [Rehmannia piasezkii] gi|224831964|gb|ACN67048.1| ribosomal protein subunit 2 [Rehmannia henryi] gi|224831966|gb|ACN67049.1| ribosomal protein subunit 2 [Rehmannia solanifolia] gi|224831968|gb|ACN67050.1| ribosomal protein subunit 2 [Rehmannia chingii] gi|224831970|gb|ACN67051.1| ribosomal protein subunit 2 [Rehmannia glutinosa] Length = 194 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 121/195 (62%), Gaps = 3/195 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D+ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDSASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDS 207 +PDL D IP NDD+ Sbjct: 180 DPDLADISIPANDDA 194 >gi|108796972|ref|YP_636272.1| ribosomal protein S2 [Pseudendoclonium akinetum] gi|122233414|sp|Q3ZIZ5|RR2_PSEAK RecName: Full=30S ribosomal protein S2, chloroplastic gi|56159670|gb|AAV80694.1| ribosomal protein S2 [Pseudendoclonium akinetum] Length = 258 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 138/224 (61%), Gaps = 7/224 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ Q++ +G+ FGH+ WNPKM+ +I+ ++++ HIIDL T L +A + ++D+V+ Sbjct: 13 LTLEQMVAAGMHFGHQARKWNPKMKPFIYAQKDSIHIIDLISTYTHLNEASKFLTDSVSI 72 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +ILFV TK Q S + +AA + VN KWLGG +TNW+T+ SIQKL+ LE K Sbjct: 73 GQKILFVGTKKQVSQLIAKAALECDSFYVNGKWLGGQLTNWQTIKLSIQKLKSLE---TK 129 Query: 126 ENQGFTKK----ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E G K E ++++++KL + LDGI++M +PD++ ++ + E A++E ++L Sbjct: 130 ERHGLLGKIPKKEAALLKKEKEKLGKYLDGIKNMASIPDIVIIIGQSEEINAVRECKKLG 189 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I + ++DT+ +P L D IP NDDS SI L +A G Sbjct: 190 IRTITILDTDCDPSLADLFIPANDDSISSIKLLLGEFVTAIKKG 233 >gi|323148895|ref|YP_004222450.1| ribosomal protein S2 [Smilax china] gi|308742586|gb|ADO33437.1| ribosomal protein S2 [Smilax china] Length = 236 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ + + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFNASSGGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA + + VN KWLGGM+TNW T + K RDL E+ + K Sbjct: 70 HFLIVGTKNKAADLVASAAIGARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ +K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LSKRDAAMLKRKLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRFILNKLVFAICEG 228 >gi|290487138|gb|ADD29953.1| ribosomal protein S2 [Dillenia indica] Length = 236 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + +RG Sbjct: 10 LEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFNAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITFGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|290487170|gb|ADD29969.1| ribosomal protein S2 [Heuchera sanguinea] Length = 236 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 70 QFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M G+PD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGVPDIVIIVDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|6650114|gb|AAF21725.1|AF055137_1 ribosomal protein subunit 2 [Triphysaria versicolor] Length = 202 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGG++TNW T +QK RDL E+ + N+ K Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGILTNWSTTETRLQKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|50346771|ref|YP_053144.1| ribosomal protein S2 [Nymphaea alba] gi|75290271|sp|Q6EW59|RR2_NYMAL RecName: Full=30S ribosomal protein S2, chloroplastic gi|50250316|emb|CAF28582.1| ribosomal protein S2 [Nymphaea alba] Length = 236 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 127/221 (57%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH W+P+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWDPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V TK +A+D V AA R+ + VN KWLGGM TNW T +QK RDL + E Sbjct: 70 HFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQKFRDLR--VRAEM 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F+ K++ ++R+ + L GI+ M GLPD++ ++D E A++E L IP Sbjct: 128 GQFSRLPKRDAAILKRQLSHFQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECVTLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + SA G Sbjct: 188 ICLIDTNCDPDLADIPIPANDDAIASIRLILNKLVSAICQG 228 >gi|2734673|gb|AAC73011.1| ribosomal protein subunit 2 [Kigelia africana] Length = 204 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVYFGHDTRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + +QK RDL E+ + N+ K Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTERRLQKFRDLRMEQKRGRLNR-LQK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAAMKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYKALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL + IP NDD+ SI L Sbjct: 180 DPDLANISIPANDDAISSIRLI 201 >gi|308234641|ref|ZP_07665378.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14018] Length = 227 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 145/226 (64%), Gaps = 8/226 (3%) Query: 42 IIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 II+L +++ M+ KA I TVA G +LFV TK QA + V A R V+ +WLGG Sbjct: 1 IINLFKSLDMIDKAYDFIKQTVAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVSERWLGG 60 Query: 102 MMTNWKTVSQSIQKLRDLEEL--LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 M+TN++TVS +++L++LEE+ + G TKKE L +ER++DKL + L GIR+M P Sbjct: 61 MLTNFQTVSTRVKRLKELEEMDFTDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTP 120 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 MFVVD N+E LA++EA +L IP+VA+VDTN++PD V+Y IP NDD+ R + L L+A Sbjct: 121 SAMFVVDINKEALAVEEAHKLGIPVVAIVDTNTDPDSVEYPIPANDDAIRGVELLTSLMA 180 Query: 220 SAAIDGI----ARQHSYMGADTK--SAGETVVHSKEGMQLEEDSQS 259 A +G+ + G+D + +A E + +KE Q E+++++ Sbjct: 181 DAVAEGLLERAGKGAKSEGSDAQPMAAWEKELLTKETEQSEDEAKA 226 >gi|6650164|gb|AAF21750.1|AF055162_1 ribosomal protein subunit 2 [Calceolaria sp. dePamphilis 90.203] gi|10179734|gb|AAG13859.1| ribosomal protein subunit 2 [Calceolaria mexicana] Length = 202 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 121/202 (59%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM Y +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYTSAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 KS+A+ V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KSKAAGSVASAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLYRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|290790774|gb|ADD63031.1| ribosomal protein S2 [Potamophila parviflora] Length = 249 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 23 LKEMIEAGVHFGHGIKKWNPKMAPYISVKRKGTHITNLARTARFLSEACDLVFDAASQGK 82 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 83 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 142 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M GLPD++ V+D +E +A++E L IP + Sbjct: 143 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTGLPDIVIVLDQQKEYIALRECAILGIPTI 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 202 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 241 >gi|256370656|ref|YP_003108481.1| 30S ribosomal protein S2 [Candidatus Sulcia muelleri SMDSEM] gi|256009448|gb|ACU52808.1| ribosomal protein S2 [Candidatus Sulcia muelleri SMDSEM] Length = 235 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/221 (37%), Positives = 133/221 (60%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I + ++ G GH + WNP M +YIF ++ HI+D+S+T+ L +A + + + G Sbjct: 6 IDEFIKVGAHLGHISSKWNPNMRQYIFMKKCGIHILDISKTIKKLNEACIFLKNISSSGK 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFVATK Q V + A + + +WLGG++TN T+ QS+++L+ ++ + L+ Sbjct: 66 KILFVATKKQIKTIVSDYADQVNMPYITERWLGGILTNIATIRQSVKQLKVIDRQKLDGT 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKER I+R + KLK+ L I M LP + +VD EK+A+ E L IPI+ Sbjct: 126 YEMMSKKERFLIKRLKAKLKKNLGSIYKMNFLPACVIIVDVTEEKIAVNECLNLGIPIIG 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDTNS+P + Y IP NDDSS+SI L + + ++GI+ Sbjct: 186 IVDTNSDPRKIKYPIPANDDSSKSINLILSYLTDSILEGIS 226 >gi|224831974|gb|ACN67053.1| ribosomal protein subunit 2 [Lancea tibetica] Length = 194 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 120/195 (61%), Gaps = 3/195 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDS 207 +PDL D IP NDD+ Sbjct: 180 DPDLADISIPANDDA 194 >gi|224831976|gb|ACN67054.1| ribosomal protein subunit 2 [Mazus pumilus] Length = 195 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 120/195 (61%), Gaps = 3/195 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDS 207 +PDL D IP NDD+ Sbjct: 180 DPDLADISIPANDDA 194 >gi|156618899|ref|YP_001430035.1| ribosomal protein S2 [Cuscuta gronovii] gi|156555937|emb|CAM98321.1| ribosomal protein S2 [Cuscuta gronovii] Length = 236 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +LE+ V GH WNPKM YI +R HI +L++T L +A ++ ++G Sbjct: 10 LEDMLEARVHLGHSTQNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFYAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RDL K Sbjct: 70 KFLIVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKKGG 129 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP ++ Sbjct: 130 LNNLPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRILGIPTIS 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +P+L D IP NDD+ SI + + A G Sbjct: 190 LIDTNCDPNLSDIAIPANDDAMASIRFILNKLVFAICQG 228 >gi|52220799|ref|YP_086955.1| ribosomal protein S2 [Panax ginseng] gi|75289356|sp|Q68S17|RR2_PANGI RecName: Full=30S ribosomal protein S2, chloroplastic gi|51235302|gb|AAT98498.1| ribosomal protein S2 [Panax ginseng] Length = 236 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMKAGVHFGHGTKKWNPKMAPYISAKRKGIHITNLTRTARFLLEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A++ V AA ++ + VN KWLGGM+TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAANLVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|290487164|gb|ADD29966.1| ribosomal protein S2 [Euonymus americanus] Length = 236 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/221 (37%), Positives = 132/221 (59%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D ++G Sbjct: 10 LKEMVEAGVHFGHGTRKWNPRMAPYISEKRKGIHITNLTKTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGG++TNW T + K RD + ++ Sbjct: 70 QFLIVGTKTKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLHKFRDFR--MEQKT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 GF K++ ++R+ L+ L GI+ M GLPD++ +VD +E A++E L IP Sbjct: 128 GGFNRLPKRDAAVLKRQLSHLQTYLGGIKYMMGLPDIVIIVDQQKEYTALRECIILGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 188 ICLIDTNCDPDLADISIPTNDDAIASIRLILNKLVFAICEG 228 >gi|10179718|gb|AAG13851.1| ribosomal protein subunit 2 [Amphianthus pusillus] Length = 202 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD--LEELLNKENQGFTK 132 K++A+D V AA R+ + VN KWLGGM+TNW T +QK RD LE+ + N+ K Sbjct: 61 KNKAADSVAWAAIRARCHFVNKKWLGGMLTNWSTTETRLQKFRDLRLEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECMTLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|224831978|gb|ACN67055.1| ribosomal protein subunit 2 [Mazus gracilis] gi|224831980|gb|ACN67056.1| ribosomal protein subunit 2 [Mazus spicatus] Length = 194 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 81/195 (41%), Positives = 120/195 (61%), Gaps = 3/195 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDS 207 +PDL D IP NDD+ Sbjct: 180 DPDLADISIPANDDA 194 >gi|189162260|ref|YP_001936506.1| ribosomal protein S2 [Fagopyrum esculentum subsp. ancestrale] gi|166065346|gb|ABY79721.1| ribosomal protein S2 [Fagopyrum esculentum subsp. ancestrale] Length = 239 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/219 (37%), Positives = 127/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D ++G Sbjct: 10 LEEMMQAGVHFGHGTRKWNPRMSPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKTKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LACLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDVVIIVDQQEEYTALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAIASIRLILTKLVFAICEG 228 >gi|6650152|gb|AAF21744.1|AF055156_1 ribosomal protein subunit 2 [Leucophyllum frutescens] Length = 202 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 9/205 (4%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-----ELLNKENQG 129 K++A+D V AA ++ CVN KWLGGM+TNW T + K RDL E LN+ Sbjct: 61 KNKAADSVAWAAIKARCNCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTERLNR---- 116 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++D Sbjct: 117 LPKRDAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLID 176 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALF 214 TN +PDL D IP NDD+ SI L Sbjct: 177 TNCDPDLADISIPANDDAISSIRLI 201 >gi|2734675|gb|AAB93689.1| ribosomal protein subunit 2 [Lathraea clandestina] Length = 204 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHLGHGTRKWNPKMVPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 NP+L D IP NDD+ SI L Sbjct: 180 NPNLADISIPANDDAISSIRLI 201 >gi|2734695|gb|AAB93699.1| ribosomal protein subunit 2 [Scrophularia californica] Length = 204 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTSRFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734681|gb|AAB93692.1| ribosomal protein subunit 2 [Orobanche corymbosa] Length = 204 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLFEACNLVFGAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A++ V EAA ++ +CVN KWLGGM+TNW T + K RDL E+ + N K Sbjct: 61 KNKAANSVAEAAIKARCHCVNKKWLGGMLTNWSTTETRLYKFRDLRMEQKAGRLNL-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|10179720|gb|AAG13852.1| ribosomal protein subunit 2 [Angelonia pubescens] Length = 202 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMGPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PD D IP NDD+ SI L Sbjct: 180 DPDFADISIPANDDAISSIRLI 201 >gi|68566004|sp|Q85FN0|RR2_ADICA RecName: Full=30S ribosomal protein S2, chloroplastic gi|48995172|gb|AAP29381.3| ribosomal protein S2 [Adiantum capillus-veneris] Length = 235 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 1/216 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +G+ FGH+ WNPKM YIF ER HI+DL+QT +L +A ++ D G L Sbjct: 13 MMAAGIHFGHQTQRWNPKMSPYIFTERKGVHILDLTQTARLLSEACDLVFDAAVEGKEFL 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQG 129 V TK+Q +D ++ AA +S + VN KWL G +TNW T +++ + L+ + E Sbjct: 73 MVGTKNQVTDLIVSAALKSQCHYVNEKWLAGTLTNWVTTETRLRRFQHLQTGGDLGEFDR 132 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K+E ++ + +LK+ L GI+ M LPD+ + D + + +A++E L IP + +VD Sbjct: 133 LPKREAAILKGQLVRLKKCLGGIQYMSDLPDIAIITDQHEQSIALKECSILGIPTICIVD 192 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 T+ +PDLVD IPGNDD+ SI D +A A +G Sbjct: 193 TDCDPDLVDVPIPGNDDARSSIRWILDKLALAISEG 228 >gi|183508520|ref|ZP_02958045.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701855|ref|ZP_02971516.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|182675957|gb|EDT87862.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701154|gb|EDU19436.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 349 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 146/237 (61%), Gaps = 9/237 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + G Sbjct: 56 SIVKLTESGAHIGLNPKKWNPKMASYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQNG 115 Query: 67 GRILFVATKSQASDCVMEA-AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLN 124 G ++FV T+ + +++A A+R+ + V +WLGG +TN+ +S+S++K +L L + Sbjct: 116 GTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFTNISRSLKKFNSNLALLES 175 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E ++KKE++ I ++ KL++ GI++M PD++ +VD + AI+EAR+L IP+ Sbjct: 176 EEINKYSKKEQIAINKETAKLEKFYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPV 235 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +A+ +TN++P L+DY+IP N+ S +SI L ++A D IA H G TK G Sbjct: 236 IALANTNADPQLIDYIIPVNNYSVKSITLILGVLA----DSIAELH---GEPTKIVG 285 >gi|171920466|ref|ZP_02931769.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902921|gb|EDT49210.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 349 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 146/237 (61%), Gaps = 9/237 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + G Sbjct: 56 SIVKLTESGAHIGLNPKKWNPKMASYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQNG 115 Query: 67 GRILFVATKSQASDCVMEA-AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLN 124 G ++FV T+ + +++A A+R+ + V +WLGG +TN+ +S+S++K +L L + Sbjct: 116 GTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFTNISRSLKKFNSNLALLES 175 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E ++KKE++ I ++ KL++ GI++M PD++ +VD + AI+EAR+L IP+ Sbjct: 176 EEINKYSKKEQIAINKETAKLEKFYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPV 235 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +A+ +TN++P L+DY+IP N+ S +SI L ++A D IA H G TK G Sbjct: 236 IALANTNADPQLIDYIIPVNNYSVKSITLILGVLA----DSIAELH---GEPTKIVG 285 >gi|300725979|ref|ZP_07059438.1| ribosomal protein S2 [Prevotella bryantii B14] gi|299776693|gb|EFI73244.1| ribosomal protein S2 [Prevotella bryantii B14] Length = 193 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 81/184 (44%), Positives = 119/184 (64%), Gaps = 1/184 (0%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 QLL++G FGH WNP M YIF ERN HIIDL++TV + +A +V+ G +I Sbjct: 8 QLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEVLKGIAKSGKKI 67 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-Q 128 LFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++L+N Sbjct: 68 LFVATKKQAKDIVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKLMNDGTFS 127 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA+RL IP+ A+V Sbjct: 128 NLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEAQRLGIPVFAIV 187 Query: 189 DTNS 192 DTNS Sbjct: 188 DTNS 191 >gi|31616542|gb|AAP55715.1| ribosomal protein S2 [Chenopodium rubrum] Length = 236 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 127/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLYKYRDLRMEQTAGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 130 LARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAIASIRLILTKLVFAICEG 228 >gi|183217731|ref|YP_001837350.1| ribosomal protein S2 [Guizotia abyssinica] gi|209573604|sp|B2LMI3|RR2_GUIAB RecName: Full=30S ribosomal protein S2, chloroplastic gi|179366246|gb|ACB86517.1| ribosomal protein S2 [Guizotia abyssinica] Length = 236 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RDL E+ Sbjct: 70 QFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGG 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E +QE L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTPLQECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP ND S SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPSNDYSISSIRLILNKLVFAICEG 228 >gi|121720602|ref|YP_001001523.1| ribosomal protein S2 [Nuphar advena] gi|122227256|sp|Q4FG66|RR2_NUPAD RecName: Full=30S ribosomal protein S2, chloroplastic gi|69216173|gb|AAZ03903.1| ribosomal protein S2 [Nuphar advena] gi|84682193|gb|ABC60447.1| ribosomal protein S2 [Nuphar advena] Length = 238 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 86/232 (37%), Positives = 130/232 (56%), Gaps = 8/232 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 8 ISLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASR 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL + Sbjct: 68 GKHFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRV---R 124 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 G K++ ++R+ + L GI+ M GLPD++ ++D E A++E L Sbjct: 125 AEMGQLSRLPKRDAAILKRQLSHFQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECVTLG 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP + ++DTN +PDL D IP NDD+ SI L + + SA G + +SY+ Sbjct: 185 IPTICLIDTNCDPDLADIPIPANDDAIASIRLILNKLVSAICQGRS-SYSYI 235 >gi|139387455|ref|YP_001122809.1| ribosomal protein S2 [Phaseolus vulgaris] gi|209573620|sp|A4GGA8|RR2_PHAVU RecName: Full=30S ribosomal protein S2, chloroplastic gi|112030977|gb|ABH88089.1| ribosomal protein S2 [Phaseolus vulgaris] gi|158187146|gb|ABW22779.1| ribosomal protein S2 [Phaseolus vulgaris] Length = 236 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI R HI +L +T L ++ ++ + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMSPYISANRKGIHITNLIRTARFLSESCDLVFHAASGGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK +A+D V AA R+ + VN KWLGGM+TNW T +QK RDL + Sbjct: 70 QFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTKTRLQKFRDLRMQQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F KK+ ++R +L+ L GI+ M GLPD++ ++D E A++E L IP + Sbjct: 130 FDCFPKKDAAILKRHLAQLETYLGGIKYMKGLPDIVIIIDQQEEYTALRECITLEIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++DTNS+PDL D IP NDD+ SI + + A +G +R Sbjct: 190 LIDTNSDPDLADISIPANDDAIASIRFILNKLVFAICEGRSR 231 >gi|165910457|gb|ABY73983.1| ribosomal protein S2 [Cuscuta cephalanthi] Length = 202 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 5/204 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 MLEARVHLGHSTRNWNPKMSPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V T + A + V A+K++ + VN KWLGGM+TNW T +QK RDL + ++ G Sbjct: 61 IVGTNNAADEAVARASKKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLR--MEQKTGGL 118 Query: 131 T---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KKE +RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + + Sbjct: 119 NNIPKKEATMFKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICL 178 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSI 211 +DTN +P+L D IP NDD+ SI Sbjct: 179 IDTNCDPNLSDIAIPANDDAIASI 202 >gi|552977|gb|AAA84732.1| ribosomal protein S2 [Triticum aestivum] Length = 236 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAASQGT 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + + +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFSICEG 228 >gi|48478766|ref|YP_024374.1| ribosomal protein S2 [Saccharum hybrid cultivar SP-80-3280] gi|50812521|ref|YP_054624.1| ribosomal protein S2 [Saccharum officinarum] gi|118614485|ref|YP_899400.1| ribosomal protein S2 [Sorghum bicolor] gi|242057457|ref|XP_002457874.1| hypothetical protein SORBIDRAFT_03g017620 [Sorghum bicolor] gi|75290179|sp|Q6ENX0|RR2_SACOF RecName: Full=30S ribosomal protein S2, chloroplastic gi|75291228|sp|Q6L3A4|RR2_SACHY RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573645|sp|A1E9R7|RR2_SORBI RecName: Full=30S ribosomal protein S2, chloroplastic gi|48478668|gb|AAT44688.1| ribosomal protein S2 [Saccharum hybrid cultivar SP80-3280] gi|49659505|dbj|BAD27286.1| ribosomal protein S2 [Saccharum hybrid cultivar NCo 310] gi|118201119|gb|ABK79489.1| ribosomal protein S2 [Sorghum bicolor] gi|194477485|gb|ACF74836.1| ribosomal protein S2 [Chasmanthium latifolium] gi|241929849|gb|EES02994.1| hypothetical protein SORBIDRAFT_03g017620 [Sorghum bicolor] gi|307697309|gb|ADN86109.1| ribosomal protein S2 [Chasmanthium latifolium] Length = 236 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA RS + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRSRCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAISEG 228 >gi|14017565|ref|NP_114252.1| ribosomal protein S2 [Triticum aestivum] gi|118430381|ref|YP_874646.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare] gi|17380274|sp|P17933|RR2_WHEAT RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573605|sp|A1E9I4|RR2_HORVU RecName: Full=30S ribosomal protein S2, chloroplastic gi|4958870|dbj|BAA78043.1| 30s r-protein CS2 [Triticum aestivum] gi|13928198|dbj|BAB47027.1| ribosomal protein S2 [Triticum aestivum] gi|118201035|gb|ABK79406.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare] Length = 236 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + + +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFSICEG 228 >gi|224831988|gb|ACN67060.1| ribosomal protein subunit 2 [Phryma leptostachya var. asiatica] Length = 194 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 120/195 (61%), Gaps = 3/195 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDS 207 +PDL D IP NDD+ Sbjct: 180 DPDLADISIPANDDA 194 >gi|195928741|gb|ACG56050.1| ribosomal protein subunit 2 [Agalinis laxa] Length = 216 Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 127/209 (60%), Gaps = 4/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGIKKWNPKMAPYISAKRKGNHITNLTRTARFLSEACNLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNKAH-LVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + Sbjct: 123 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTI 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D+ IP NDD SI L Sbjct: 182 CLIDTNCDPDLADFSIPANDDGISSIRLI 210 >gi|6650158|gb|AAF21747.1|AF055159_1 ribosomal protein subunit 2 [Callitriche hermaphroditica] Length = 202 Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++ ++ V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKTANSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRFNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734701|gb|AAB93702.1| ribosomal protein subunit 2 [Veronica arvensis] Length = 204 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 118/201 (58%), Gaps = 1/201 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLDRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQYDEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALF 214 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLI 201 >gi|13357582|ref|NP_077856.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761852|ref|YP_001752106.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|25009227|sp|Q9PRB9|RS2_UREPA RecName: Full=30S ribosomal protein S2 gi|209573789|sp|B1AI12|RS2_UREP2 RecName: Full=30S ribosomal protein S2 gi|11357042|pir||D82943 ribosomal protein S2 UU026 [imported] - Ureaplasma urealyticum gi|6898972|gb|AAF30431.1|AE002102_5 ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827429|gb|ACA32691.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 27815] Length = 349 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 146/237 (61%), Gaps = 9/237 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + G Sbjct: 56 SIVKLTESGAHIGLNPKKWNPKMASYIHAKRSNNHVIDILKTILFLDRAYKFLQEVSQNG 115 Query: 67 GRILFVATKSQASDCVMEA-AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLN 124 G ++FV T+ + +++A A+R+ + V +WLGG +TN+ +S+S++K +L L + Sbjct: 116 GTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFTNISRSLKKFNSNLALLES 175 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E ++KKE++ I ++ KL++ GI++M PD++ +VD + AI+EAR+L IP+ Sbjct: 176 EEINKYSKKEQIAINKETAKLEKFYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPV 235 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +A+ +TN++P L+DY+IP N+ S +SI L ++A D IA H G TK G Sbjct: 236 IALANTNADPQLIDYIIPVNNYSVKSITLILGVLA----DSIAELH---GEPTKIVG 285 >gi|195928679|gb|ACG56019.1| ribosomal protein subunit 2 [Agalinis acuta] Length = 217 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 126/215 (58%), Gaps = 3/215 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP + Sbjct: 124 LNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 ++DTN +PDL D IP NDD SI + + S Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSIRFILNKLVS 217 >gi|2734689|gb|AAB93696.1| ribosomal protein subunit 2 [Rhinanthus cristatus] Length = 203 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHLGHGTRXWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ + + + K Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQQMGRLXR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +P+L D IP NDD+ SI L Sbjct: 180 DPNLADISIPANDDAISSIRLI 201 >gi|290487180|gb|ADD29974.1| ribosomal protein S2 [Staphylea colchica] Length = 236 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 83/219 (37%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V T+++A+ V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTQNKAAGSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LSRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|295137018|ref|YP_003587565.1| ribosomal protein S2 [Pisum sativum] gi|133913|sp|P08241|RR2_PEA RecName: Full=30S ribosomal protein S2, chloroplastic gi|12138|emb|CAA27546.1| unnamed protein product [Pisum sativum] gi|293338590|gb|ADE43563.1| ribosomal protein S2 [Pisum sativum] Length = 236 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 127/221 (57%), Gaps = 3/221 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T +++E+GV FGH WNP+M +I +R HI +L++T L +A + D ++G Sbjct: 9 TFEEMMEAGVHFGHDTRKWNPRMAPFISAKRKGIHITNLTKTARFLSEACDLAFDAASKG 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLN 124 + L V TK +A+D V AA R+ + VN KWL GM+TNW T + K RDL E+ Sbjct: 69 KQFLIVGTKKKAADSVTRAAIRARCHYVNKKWLRGMLTNWYTTETRLGKFRDLRTEQKTG 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K N K++ ++R+ + L GI+ M GLPD++ +VD +E A+QE L IP Sbjct: 129 KLNS-LPKRDAAMLKRQLSHFETYLGGIKYMTGLPDIVIIVDQQKEYTALQECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 188 ICLIDTNCDPDLADMSIPANDDAIASIRLILNKLVFAICEG 228 >gi|195928675|gb|ACG56017.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928685|gb|ACG56022.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928803|gb|ACG56081.1| ribosomal protein subunit 2 [Agalinis tenella] Length = 217 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP + Sbjct: 124 LNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|195928669|gb|ACG56014.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928671|gb|ACG56015.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928677|gb|ACG56018.1| ribosomal protein subunit 2 [Agalinis acuta] Length = 216 Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP + Sbjct: 124 LNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|195928681|gb|ACG56020.1| ribosomal protein subunit 2 [Agalinis acuta] Length = 218 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP + Sbjct: 124 LNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|195928673|gb|ACG56016.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928683|gb|ACG56021.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928703|gb|ACG56031.1| ribosomal protein subunit 2 [Agalinis decemloba] gi|195928757|gb|ACG56058.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928805|gb|ACG56082.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928807|gb|ACG56083.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928809|gb|ACG56084.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928811|gb|ACG56085.1| ribosomal protein subunit 2 [Agalinis tenella] Length = 218 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP + Sbjct: 124 LNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|308196281|gb|ADO17488.1| ribosomal protein S2 [Arundinaria gigantea] Length = 236 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|195928781|gb|ACG56070.1| ribosomal protein subunit 2 [Agalinis pulchella] Length = 218 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHYTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T +A++ V AA ++ + V KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTTKKAANLVAWAAIKARCHYVKKKWLGGMLTNWSTTETRLQKFRDLRIEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDDS SI L Sbjct: 183 CLIDTNCDPDLADLPIPANDDSRSSICLI 211 >gi|195928795|gb|ACG56077.1| ribosomal protein subunit 2 [Agalinis skinneriana] gi|195928797|gb|ACG56078.1| ribosomal protein subunit 2 [Agalinis skinneriana] Length = 218 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++L++GV FGH WNPKM YI +R HI +L++T L + ++ +RG Sbjct: 4 LEEMLKAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAASRGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKREAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDL D IP NDD SI Sbjct: 183 CLIDTNCDPDLADISIPANDDGRSSI 208 >gi|255012656|ref|ZP_05284782.1| 30S ribosomal protein S2 [Bacteroides sp. 2_1_7] Length = 252 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 126/199 (63%), Gaps = 1/199 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YIF ERN HIIDL +TV + +A +V+ + +G ++LFVATK QA V + A Sbjct: 1 MAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKNLAKQGKKVLFVATKKQAKQVVADKAAS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRDKLKR 147 V +W GGM+TN+ T+ ++I+K+ ++++ +K+E+L I R+R KL++ Sbjct: 61 VGMPYVIERWPGGMLTNFPTIRKAIKKMATIDKMTKDGTFDNLSKREKLQITRQRAKLEK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L I D+ LP +FVVD +E +A++EA RL IP+ +VDTNSNP+ +DYVIP NDD+ Sbjct: 121 TLGSIVDLTRLPSALFVVDVMKEHIAVREANRLGIPVFGMVDTNSNPNNIDYVIPANDDA 180 Query: 208 SRSIALFCDLVASAAIDGI 226 ++S+ + + A +G+ Sbjct: 181 TKSVEVILGAICEAMNEGL 199 >gi|290487144|gb|ADD29956.1| ribosomal protein S2 [Lonicera japonica] Length = 236 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D +R Sbjct: 10 LEEMMEAGVHFGHGIRKWNPKMAPYISAKRKGNHITNLTRTARFLSEACNLVFDAASRRK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK +A+D V AA R+ + VN KW GGM+TNW T + K RDL ++ + Sbjct: 70 QFLIVGTKKKAADSVARAAIRARCHYVNKKWPGGMLTNWSTTEMRLHKFRDLRTQQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ VVD + E A++E L IP + Sbjct: 130 LNR-LPKRDAAMLKRRLSHLQTYLGGIKYMTGLPDIVIVVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADLPIPANDDAISSIRLILNKLVFAICEG 228 >gi|165910461|gb|ABY73985.1| ribosomal protein S2 [Cuscuta compacta] Length = 201 Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 5/203 (2%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 LEARVHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFSAASRGKTFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RDL + ++ G Sbjct: 61 VGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLR--MEQKTGGLN 118 Query: 132 ---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 KKE +RK L++ L GI+ M GLPD++ ++D ++E A+QE R L IP ++++ Sbjct: 119 NIPKKEATIFKRKLAHLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRALGIPTISLI 178 Query: 189 DTNSNPDLVDYVIPGNDDSSRSI 211 DTN +P+L D IP NDD+ SI Sbjct: 179 DTNCDPNLSDIAIPANDDAIASI 201 >gi|195928779|gb|ACG56069.1| ribosomal protein subunit 2 [Agalinis pulchella] Length = 217 Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHYTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAASGGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T +A++ V AA ++ + V KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTTKKAANLVAWAAIKARCHYVKKKWLGGMLTNWSTTETRLQKFRDLRIEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDDS SI L Sbjct: 183 CLIDTNCDPDLADLPIPANDDSRSSICLI 211 >gi|62149318|dbj|BAD93460.1| ribosomal protein S2 [Silene latifolia] Length = 236 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 KFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M LPD++ +VD +E A++E L IP + Sbjct: 130 LARLPKRDAAVVKRQLSHLQTYLGGIKYMTELPDIVIIVDQQKEYTALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAISSIQLILTKLVFAICEG 228 >gi|6650134|gb|AAF21735.1|AF055147_1 ribosomal protein subunit 2 [Orobanche cernua] Length = 202 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 121/202 (59%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K QA++ V AA ++ +CVN KWLGG +TNW T + + RDL E+ + + + K Sbjct: 61 KKQAANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKR-CPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 +++ ++R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN Sbjct: 120 RDKAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PD+ D IP NDDS SI L Sbjct: 180 DPDIADLSIPANDDSISSIRLI 201 >gi|326909383|ref|YP_004327652.1| ribosomal protein S2 [Hevea brasiliensis] gi|308523497|gb|ADO33547.1| ribosomal protein S2 [Hevea brasiliensis] Length = 236 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 10 LEEMMKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K + ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKGDAARLKRQLTHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECMTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPTNDDAIASIRLILNKLVFAICEG 228 >gi|2734653|gb|AAB93679.1| ribosomal protein subunit 2 [Boschniakia strobilacea] Length = 204 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WN KM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVPFGHVTRKWNTKMAPYISAKRKGIHITNLTRTARFLSEACGLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + KLR+L E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRELRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|10179722|gb|AAG13853.1| ribosomal protein subunit 2 [Bacopa caroliniana] Length = 202 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIRARCHFVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|194033142|ref|YP_002000480.1| ribosomal protein S2 [Brachypodium distachyon] gi|193075550|gb|ACF08633.1| ribosomal protein S2 [Brachypodium distachyon] Length = 236 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIQYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|295136942|ref|YP_003587775.1| ribosomal protein S2 [Lathyrus sativus] gi|293338664|gb|ADE43636.1| ribosomal protein S2 [Lathyrus sativus] Length = 231 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 127/221 (57%), Gaps = 3/221 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ ++L++GV FGH WNP+M +I +R HI +L++T L +A + D ++G Sbjct: 9 TLEEMLKAGVHFGHETRKWNPRMAPFISAKRKGNHITNLTKTARFLSEACDLAFDAASKG 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLN 124 + L V TK + + V AA R+ + VN KWLGGM+TNW T ++K RDL E+ Sbjct: 69 KQFLIVGTKRKVAYSVRRAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQKTG 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K N K++ ++R+ L+ L GI+ M GLPD++ ++D E A+QE L IP Sbjct: 129 KLNS-LPKRDAAMLKRQLSHLETYLGGIKYMTGLPDIVIILDQEEEYKALQECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + V+DTN +PDL D IP NDD+ SI + + A +G Sbjct: 188 ICVIDTNCDPDLADLPIPANDDTMASIGFILNKLVFAICEG 228 >gi|116008995|gb|ABJ52166.1| ribosomal protein S2 [Phyllostachys edulis] Length = 231 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 131/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D ++G Sbjct: 9 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAASQGK 68 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+ V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 69 SFLIVGTKKRAAYLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 128 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 129 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 187 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 188 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 227 >gi|290487168|gb|ADD29968.1| ribosomal protein S2 [Gunnera manicata] Length = 236 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M LPD++ +VD E A++E L IP + Sbjct: 130 LNR-LQKRDAAVLKRQLSHLETYLGGIKYMTWLPDIVIIVDQQEEYTALRECVTLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PD+ D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDIADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|225544113|ref|YP_002720101.1| rps2 [Jatropha curcas] gi|224979554|gb|ACN72681.1| rps2 [Jatropha curcas] Length = 236 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 10 LEEMIKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RDL E+ + Sbjct: 70 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQKAGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K + ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + Sbjct: 130 LNR-LPKGDAARLKRQLAHLQTYLGGIKYMTGLPDVVIIVDQQEEHTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|10179724|gb|AAG13854.1| ribosomal protein subunit 2 [Collinsia grandiflora] Length = 201 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 4/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPK YI +R HI +L++T +L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKAP-YISAKRKGIHITNLTRTARVLSEACBLVFDAASRGKQFLIVGT 59 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 60 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPK 118 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 119 RDAAMVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 178 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 179 DPDLADISIPANDDAISSIRLI 200 >gi|2734663|gb|AAB93684.1| ribosomal protein subunit 2 [Digitalis purpurea] Length = 204 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 1/201 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLDRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTALPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALF 214 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLI 201 >gi|325278096|ref|ZP_08143612.1| 30S ribosomal protein S2 [Pseudomonas sp. TJI-51] gi|324096773|gb|EGB95103.1| 30S ribosomal protein S2 [Pseudomonas sp. TJI-51] Length = 194 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/161 (51%), Positives = 110/161 (68%), Gaps = 5/161 (3%) Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE E+ Sbjct: 15 KILFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLET--QAED 72 Query: 128 QGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L IP+ Sbjct: 73 GTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPV 132 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 133 IGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRG 173 >gi|165910459|gb|ABY73984.1| ribosomal protein S2 [Cuscuta glomerata] Length = 201 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 MLEARVHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V T + A + V A+KR+ + VN KWL GM+TNW T +QK RDL + ++ G Sbjct: 61 IVGTNNAADEAVARASKRARCHYVNKKWLAGMLTNWSTTETRLQKFRDLR--IEQKTGGL 118 Query: 131 T---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KKE ++RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + + Sbjct: 119 NNIPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICL 178 Query: 188 VDTNSNPDLVDYVIPGNDDS 207 +DTN +P+L D IP NDD+ Sbjct: 179 IDTNCDPNLSDIAIPANDDA 198 >gi|69216169|gb|AAZ03901.1| ribosomal protein S2 [Acorus americanus] Length = 235 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASGGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KWLGGM TNW T +Q RDL E+ K Sbjct: 70 HFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQNFRDLRAEQKAGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ K++ ++R+ L+ L GI+ M GLPD++ +VD + A++E L IP + Sbjct: 130 IDR-LPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECVILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTNS+PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|75755648|ref|YP_319754.1| ribosomal protein S2 [Acorus calamus] gi|161622299|ref|YP_001586171.1| ribosomal protein S2 [Acorus americanus] gi|122227062|sp|Q3V545|RR2_ACOCL RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573630|sp|A9LYH4|RR2_ACOAM RecName: Full=30S ribosomal protein S2, chloroplastic gi|74381698|emb|CAI53783.1| ribosomal protein S2 [Acorus calamus] gi|160369842|gb|ABX38733.1| ribosomal protein S2 [Acorus americanus] Length = 236 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASGGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KWLGGM TNW T +Q RDL E+ K Sbjct: 70 HFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQNFRDLRAEQKAGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ K++ ++R+ L+ L GI+ M GLPD++ +VD + A++E L IP + Sbjct: 130 IDR-LPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECVILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTNS+PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|309775657|ref|ZP_07670656.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 3_1_53] gi|308916563|gb|EFP62304.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 3_1_53] Length = 291 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 128/201 (63%), Gaps = 7/201 (3%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ I+ RN +II+L +T+ L A + D +GG++LFV TK QA V+E A R Sbjct: 1 MKPNIYASRNGVYIINLEKTLEQLDTAYAAMKDIAEKGGKVLFVGTKKQAQAVVVEEALR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIERKRDK 144 S + VN +WLGG++TN++T+ + +++L ++EE+ E G + KKE +++++ + Sbjct: 61 SGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM---EANGTLDLYPKKEIAQVKKQKAR 117 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 L+ L GI++M LP+ +FV+D E A+ EA++L IP+ A+VDTN +P+ VDY I N Sbjct: 118 LENFLGGIKEMKKLPNAIFVIDPKEEHNAVAEAKKLGIPVFAMVDTNCDPETVDYPIASN 177 Query: 205 DDSSRSIALFCDLVASAAIDG 225 DD+ RS+ L L+A A ++ Sbjct: 178 DDAIRSVKLITTLMADAIVEA 198 >gi|290790842|gb|ADD63098.1| ribosomal protein S2 [Microlaena stipoides] Length = 249 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 23 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAASQGK 82 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 83 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 142 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 143 FHH-LPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 202 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 241 >gi|169794062|ref|YP_001718426.1| ribosomal protein S2 [Manihot esculenta] gi|209573612|sp|B1NWD9|RR2_MANES RecName: Full=30S ribosomal protein S2, chloroplastic gi|157695874|gb|ABV66143.1| ribosomal protein S2 [Manihot esculenta] Length = 236 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/218 (38%), Positives = 129/218 (59%), Gaps = 3/218 (1%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D +R + Sbjct: 12 EMMKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRKQF 71 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKEN 127 L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RDL E+ + N Sbjct: 72 LIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQKAGRLN 131 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + K + ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + + Sbjct: 132 R-LPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECMTLGIPTICL 190 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 191 IDTNCDPDLADISIPTNDDAIASIRLILNKLVFAICEG 228 >gi|239794315|dbj|BAH73312.1| ribosomal protein S2 [Cryptomeria japonica] gi|239794398|dbj|BAH73394.1| ribosomal protein S2 [Cryptomeria japonica] Length = 235 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++++ GV FGH WNPKM YIF ER + HII+L+ T L +A + D RG Sbjct: 10 LKEMVKVGVHFGHETRKWNPKMAPYIFKERKDNHIINLTYTARFLSEACDFVFDGAKRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V TK Q +D AA + + VN KWL GM+TNW T ++K ++L + N Sbjct: 70 QFMIVGTKHQTADAAKLAALAARCHYVNKKWLAGMLTNWFTTEARLEKFKNLTKKKNTGG 129 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 GFTKKE ++R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP + Sbjct: 130 FDGFTKKEAAILKRELNKLQEDLGGIRYMTKLPDIVIILDQKGEYTAIRECRTLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIAL 213 +VDT+ +PDLVD IP NDD I L Sbjct: 190 LVDTDCDPDLVDIPIPANDDGRGPIRL 216 >gi|11467791|ref|NP_050842.1| ribosomal protein S2 [Nephroselmis olivacea] gi|25009144|sp|Q9TL03|RR2_NEPOL RecName: Full=30S ribosomal protein S2, chloroplastic gi|5880720|gb|AAD54813.1|AF137379_36 ribosomal protein S2 [Nephroselmis olivacea] Length = 272 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/216 (41%), Positives = 127/216 (58%), Gaps = 11/216 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ Q+L+ GV FGH+ WNPKM YIF ER HI+D+ QT +L KA A Sbjct: 3 TLEQMLDVGVHFGHQARKWNPKMAPYIFGERKGIHILDILQTAILLDKARVYARRQAASN 62 Query: 67 GRILFVATKSQASDCVMEAAK------RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 G LFV TK+QA+ V AA+ RS + VN +WLGGM+TNW T+ I++L +LE Sbjct: 63 GSFLFVGTKNQAASIVRFAAERCQKNDRSQAHYVNHRWLGGMLTNWPTMQLCIKRLLELE 122 Query: 121 ELLNKENQG---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 N E G F KKE ++ +L++ L G+++M GLP + +V +E A++E Sbjct: 123 S--NHERGGFQQFPKKEAAVARKQLARLEKHLGGVKNMTGLPTTVVIVGQPQEMNAVREC 180 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 +L IP++ ++D++ NP L D IP NDDS SI L Sbjct: 181 EKLGIPMITMLDSDCNPLLTDIGIPSNDDSIASIEL 216 >gi|19920161|gb|AAM08593.1|AC092750_27 Putative ribosomal protein S2 from chromosome 10 chloroplast insertion [Oryza sativa Japonica Group] gi|21327353|gb|AAM48258.1|AC122148_11 Putative ribosomal protein S2 from chromosome 10 chloroplast insertion [Oryza sativa Japonica Group] Length = 236 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLTAEEKMEK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|213418255|ref|ZP_03351321.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 161 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 80/156 (51%), Positives = 109/156 (69%), Gaps = 1/156 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + Sbjct: 61 KILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLM 162 + TKKE L R+ +KL+ +L GI+DMGGLPD + Sbjct: 121 FEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDAL 156 >gi|114329645|ref|YP_740464.1| ribosomal protein S2 [Citrus sinensis] gi|122166194|sp|Q09MI9|RR2_CITSI RecName: Full=30S ribosomal protein S2, chloroplastic gi|113952611|gb|ABI49009.1| ribosomal protein S2 [Citrus sinensis] Length = 236 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+G+ FGH WNP+M YI + HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGIHFGHGTRKWNPRMAPYISAKHKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADLVARAAIRARCHYVNQKWLGGMLTNWSTTETRLHKFRDLRTEQKGGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ +L+ L GI+ M +PD++ VVD E A++E L IP + Sbjct: 130 LDSLPKRDAAILKRQLSRLQTYLGGIKYMTRVPDIVIVVDQQEEYTALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 190 LIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|69216171|gb|AAZ03902.1| ribosomal protein S2 [Ginkgo biloba] Length = 232 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH+ WNP+M YI ER HII+L++T L +A + D +G Sbjct: 10 LEEMMEAGVHFGHQARKWNPRMSPYISTERRGIHIINLAKTARSLSEACDFVFDAAGKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ ++ Sbjct: 70 QFPIVGTKYQAADLVASAAIGARCHYVNKKWLGGMLTNWSTTETRPQKFKDLKK--ERDT 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F KKE ++ + +L++ GI+ M LPD++ +VD E AI E L IP Sbjct: 128 GRFNRPPKKETAMLKGQLSQLQKYPGGIKYMTSLPDIVIIVDQQEEYTAIGECIILGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDT+ +PDL+D IP NDD+ SI L + + SA +G Sbjct: 188 ICLVDTDCDPDLIDVPIPANDDARASIRLILNKLTSAICEG 228 >gi|17129600|dbj|BAB72238.1| ribosomal protein subunit 2 [Cistanche tubulosa] Length = 240 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPK+ YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + + RDL E+ + + Sbjct: 70 QFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ +++ ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPRRDSAVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|42795482|gb|AAS46049.1| ribosomal protein S2 [Oryza sativa Indica Group] gi|42795548|gb|AAS46114.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|42795612|gb|AAS46177.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|290790567|gb|ADD62827.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|290790636|gb|ADD62895.1| ribosomal protein S2 [Oryza meridionalis] Length = 249 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 23 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGK 82 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 83 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEK 142 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 143 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 202 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 241 >gi|11466780|ref|NP_039376.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|132444674|ref|YP_654209.2| ribosomal protein S2 [Oryza sativa Indica Group] gi|148840854|sp|P0C480|RR2_ORYSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|148840857|sp|P0C481|RR2_ORYSI RecName: Full=30S ribosomal protein S2, chloroplastic gi|148840858|sp|P0C482|RR2_ORYSJ RecName: Full=30S ribosomal protein S2, chloroplastic gi|20143582|gb|AAM12339.1|AC091680_40 ribosomal protein S2 [Oryza sativa Japonica Group] gi|20146743|gb|AAM12479.1|AC074232_6 ribosomal protein S2 [Oryza sativa Japonica Group] gi|11974|emb|CAA33989.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|46805109|dbj|BAD17348.1| rice chloroplast ribosomal protein S2 [Oryza sativa Japonica Group] gi|226692|prf||1603356T ribosomal protein S2 Length = 236 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|290790705|gb|ADD62963.1| ribosomal protein S2 [Oryza australiensis] Length = 249 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 23 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGK 82 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 83 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEK 142 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 143 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 202 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 241 >gi|260677413|ref|YP_003208181.1| ribosomal protein S2 [Coix lacryma-jobi] gi|209361351|gb|ACI43266.1| ribosomal protein S2 [Coix lacryma-jobi] Length = 236 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA RS + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRSRCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PD + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDHANISIPANDDTMTSIRLILNKLVFAISEG 228 >gi|56784289|dbj|BAD81971.1| Chloroplast ribosomal protein S2 [Oryza sativa Japonica Group] Length = 236 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRTEEKMEK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|165910455|gb|ABY73982.1| ribosomal protein S2 [Cuscuta rostrata] Length = 204 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 5/202 (2%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V GH WNPKM YI R HI +L++T L +A ++ +RG L V T Sbjct: 2 VHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFLIVGTN 61 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT---K 132 + A + V A+KR+ + VN KWLGGM+TNW T +QK RDL + ++ G K Sbjct: 62 NAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLR--MEQKTGGLNNIPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 KE ++RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + ++DTN Sbjct: 120 KEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +P+L D IP NDD+ SI + Sbjct: 180 DPNLSDIAIPANDDAIASIRII 201 >gi|290487154|gb|ADD29961.1| ribosomal protein S2 [Rhododendron simsii] Length = 236 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V FGHR WNPKM YI+ +R HI +L+ T L +A ++ D R Sbjct: 10 LEEMMEARVHFGHRIKKWNPKMAPYIWAKRKGMHITNLALTTRFLSEACDLVFDAARRRK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 RIL V TK + +D V AA ++ + VN KWLGGM+TNW T + + K + L EL Sbjct: 70 RILIVGTKKRVADSVARAAIKARCHYVNKKWLGGMLTNWSTTERRLCKFKKLRLELKMVR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++RK L+ L GI+ M +PD++ ++D ++E A++E L IP + Sbjct: 130 RNLLKKRDAARLKRKLSHLQTYLGGIKYMTAIPDIVIIIDQHKEYTALRECIILGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDLVD+ IP NDD+ SI + A +G Sbjct: 190 LIDTNCDPDLVDFPIPANDDTRASIRFILTKLVFAICEG 228 >gi|162945957|gb|ABY20988.1| Rps2 [Thuja plicata] Length = 231 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/224 (40%), Positives = 132/224 (58%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++++ GV FGH WNPKM YIF ER ++HII+L+ T L +A + D RG Sbjct: 10 LKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLTYTARFLSEACDFVFDGAKRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V TK Q +D AA + + VN KW GM+TNW T ++KL++ L+ ++N Sbjct: 70 QFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKLKN---LMKQKN 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G FTKKE + R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIRYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP ND+S SI L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDNSRGSIRLILNKLILAIRTGKA 230 >gi|222084190|ref|YP_002519784.1| ribosomal protein S2 [Gnetum parvifolium] gi|149941460|dbj|BAF64897.1| ribosomal protein S2 [Gnetum parvifolium] gi|220983527|dbj|BAH11295.1| ribosomal protein S2 [Gnetum parvifolium] Length = 240 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 8/228 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L + + +++ V GH+ WNPKM YI E N HII+L QT L + + D Sbjct: 4 LKKNIFKDMIKVAVHLGHKKSEWNPKMGYYILTECRNRHIINLVQTAHFLSETCDFVLDA 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + L V T++ A+D V AAK++ + VN KW G++TNW T + +++ R+L++ Sbjct: 64 ARKRKEFLIVGTRTYAADLVASAAKKAGCHYVNYKWQSGLLTNWSTTKERLERFRNLKQ- 122 Query: 123 LNKENQGF-----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 K + G TKKE IE++ L++ L G+ M LPD++ +VD +E A++E Sbjct: 123 --KYDSGLFHRRRTKKEIALIEKQLALLQQYLGGVLYMKKLPDIVIIVDQQKESTAVREC 180 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 R L IPI+ +VDTN +PDLVD IP NDD+ S+ L + + SA G Sbjct: 181 RALGIPIIGLVDTNCDPDLVDIPIPANDDARGSVGLILNKIMSAVSYG 228 >gi|171920828|ref|ZP_02932004.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188524193|ref|ZP_03004255.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867363|ref|ZP_03079367.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273435|ref|ZP_03205971.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209553993|ref|YP_002284439.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550919|ref|ZP_03771868.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|238058203|sp|B5ZAJ9|RS2_UREU1 RecName: Full=30S ribosomal protein S2 gi|171903598|gb|EDT49887.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195659850|gb|EDX53230.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660839|gb|EDX54092.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249955|gb|EDY74735.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541494|gb|ACI59723.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225380073|gb|EEH02435.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 351 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 138/217 (63%), Gaps = 2/217 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + G Sbjct: 56 SIVKLTESGAHIGLNPKKWNPKMANYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQNG 115 Query: 67 GRILFVATKSQASDCVMEA-AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLN 124 G ++FV T+ + +++A A+R+ + V +WLGG +TN+ +S+S++K +L L + Sbjct: 116 GTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFANISRSLKKFNSNLALLES 175 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E ++KKE++ I ++ KL++ GI+ M PD++ +VD + AI+EAR+L IP+ Sbjct: 176 EEINKYSKKEQIAINKETAKLEKFYGGIKTMKQRPDVLILVDPVNDVNAIKEARKLNIPV 235 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +A+ +TN++P L+DY+IP N+ S +SI L ++A A Sbjct: 236 IALANTNADPQLIDYIIPVNNYSVKSITLILGVLADA 272 >gi|195928721|gb|ACG56040.1| ribosomal protein subunit 2 [Agalinis filicaulis] Length = 218 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 3/207 (1%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ D + G + Sbjct: 6 EMLEAGVHFGHGTKKWNPKMAPYISAKRKGMHITNLTRTARFLSEICDLVFDAASGGKQF 65 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKEN 127 L V T +D V AA ++ +CV KWLGGM+TNW T +Q+ RDL E+ + N Sbjct: 66 LIVGTTKTVADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQQFRDLRMEQKTGRLN 125 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + K++ ++++ +L+ L GI+ M GLPD++ +VD ++E A++E L IP ++V Sbjct: 126 RR-PKRDVAVVKKQLSRLQTYLGGIKYMTGLPDIVIIVDQHKEYTALRECITLGIPTISV 184 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALF 214 +DTN +PDL D IP NDD SI L Sbjct: 185 IDTNCDPDLADISIPANDDGRSSIRLI 211 >gi|195928719|gb|ACG56039.1| ribosomal protein subunit 2 [Agalinis filicaulis] Length = 217 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 3/207 (1%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ D + G + Sbjct: 6 EMLEAGVHFGHGTKKWNPKMAPYISAKRKGMHITNLTRTARFLSEICDLVFDAASGGKQF 65 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKEN 127 L V T +D V AA ++ +CV KWLGGM+TNW T +Q+ RDL E+ + N Sbjct: 66 LIVGTTKTVADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQQFRDLRMEQKTGRLN 125 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + K++ ++++ +L+ L GI+ M GLPD++ +VD ++E A++E L IP ++V Sbjct: 126 RR-PKRDVAVVKKQLSRLQTYLGGIKYMTGLPDIVIIVDQHKEYTALRECITLGIPTISV 184 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALF 214 +DTN +PDL D IP NDD SI L Sbjct: 185 IDTNCDPDLADISIPANDDGRSSIRLI 211 >gi|297837969|ref|XP_002886866.1| ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata] gi|297332707|gb|EFH63125.1| ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata] Length = 225 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 127/218 (58%), Gaps = 10/218 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D +RG Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGGM+TNW T E+ L+K Sbjct: 70 QFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTT----------EKRLHKGI 119 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP +++ Sbjct: 120 NRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPTISL 179 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +DTN NPDL D IP NDD+ SI + + A +G Sbjct: 180 IDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEG 217 >gi|18860300|ref|NP_569618.1| ribosomal protein S2 [Psilotum nudum] gi|25009141|sp|Q8WI27|RR2_PSINU RecName: Full=30S ribosomal protein S2, chloroplastic gi|18389453|dbj|BAB84205.1| ribosomal protein S2 [Psilotum nudum] Length = 239 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 7/232 (3%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 ++L++GV FGH+ WNPKM +IF ER HI++L QT + +A ++ + + G + Sbjct: 12 EMLKAGVHFGHQTRKWNPKMAPHIFMERKGVHILNLIQTARFISEACDLVYNAASEGKQF 71 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 L V TK + + + AA ++ + VN KW+GGM+TNW T+ + +QKLR LE + K G Sbjct: 72 LLVGTKPRIAHLISSAAIKARCHYVNYKWIGGMLTNWSTIEKRLQKLRSLE--IRKRMGG 129 Query: 130 ---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +K+E + + KL + L GI M LPD++ +VD ++E AI+E L IP + Sbjct: 130 LDNLSKEEAAILRGQLSKLHKYLGGILYMKNLPDIVIIVDQHKELTAIRECMILDIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 VVDT+ +PDL + IP NDD+ SI + + A +G R HS ++K Sbjct: 190 VVDTDCDPDLTNIPIPANDDAQSSIRWILNQLTLAIREG--RCHSMSPKNSK 239 >gi|254553687|gb|ACT67302.1| ribosomal protein S2 [Joinvillea plicata] Length = 236 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNP+M YI + THI +L++T L +A ++ D +RG Sbjct: 10 LKEMIEAGVHFGHGIKKWNPRMAPYISAKHKGTHITNLARTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKNRAADSVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ ++RK L+R L GI+ M LPD++ ++D E A++E L IP + Sbjct: 130 INH-LPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIILDQQEEYTALRECTILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLANISIPANDDTMASIRLILNKLVFAICEG 228 >gi|172072928|ref|YP_001806689.1| ribosomal protein S2 [Cryptomeria japonica] gi|209573597|sp|B1VKH6|RR2_CRYJA RecName: Full=30S ribosomal protein S2, chloroplastic gi|171854947|dbj|BAG16687.1| ribosomal protein S2 [Cryptomeria japonica] Length = 235 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 123/207 (59%), Gaps = 1/207 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++++ GV FGH WNPKM YIF ER + HI++L+ T L +A + D RG Sbjct: 10 LKEMVKVGVHFGHETRKWNPKMAPYIFKERKDNHILNLTYTARFLSEACDFVFDGAKRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V TK Q +D AA + + VN KWL GM+TNW T ++K ++L + N Sbjct: 70 QFMIVGTKHQTADAAKLAALAARCHYVNKKWLAGMLTNWFTTEARLEKFKNLTKKKNTGG 129 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 GFTKKE ++R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP + Sbjct: 130 FDGFTKKEAAILKRELNKLQEDLGGIRYMTKLPDIVIILDQKGEYTAIRECRTLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIAL 213 +VDT+ +PDLVD IP NDD I L Sbjct: 190 LVDTDCDPDLVDIPIPANDDGRGPIRL 216 >gi|2734703|gb|AAB93703.1| ribosomal protein subunit 2 [Verbascum blattaria] Length = 204 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 3/199 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V TK++ Sbjct: 4 FGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGTKNK 63 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A+D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K++ Sbjct: 64 AADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPKRDA 122 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 123 AMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 182 Query: 196 LVDYVIPGNDDSSRSIALF 214 L D IP NDD+ SI L Sbjct: 183 LADISIPANDDAISSIRLI 201 >gi|50233964|ref|YP_052742.1| ribosomal protein S2 [Oryza nivara] gi|68052947|sp|Q6ENI1|RR2_ORYNI RecName: Full=30S ribosomal protein S2, chloroplastic gi|49614988|dbj|BAD26771.1| ribosomal protein S2 [Oryza nivara] Length = 236 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLLRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ DTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|6650166|gb|AAF21751.1|AF055163_1 ribosomal protein subunit 2 [Gratiola pilosa] Length = 202 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 121/202 (59%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHCTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD--LEELLNKENQGFTK 132 K++A+D V AA R+ + VN KWLGGM+TNW T + K RD LE+ + N+ K Sbjct: 61 KNKAADSVAWAAIRARCHFVNKKWLGGMLTNWATTETRLXKFRDLRLEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECMTXGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|2734677|gb|AAB93690.1| ribosomal protein subunit 2 [Ligustrum japonicum] Length = 204 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 121/202 (59%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFYAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K +A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KKKAADSVAWAAIKARCHYVNKKWLGGMLTNWSTTETRVHKFRDLRIEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAMLKRQLSRLQTYVGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD++ SI L Sbjct: 180 DPDLADISIPANDDATSSIRLI 201 >gi|2734647|gb|AAB93676.1| ribosomal protein subunit 2 [Bartsia alpina] Length = 204 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WN KM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVPFGHVTRKWNTKMAPYISAKRKGIHITNLTRTARFLSEACGLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++A+D V AA ++ +CVN KWLGGM+TNW T + KLRDL E+ + N+ K Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +P+L D IP NDD+ S L Sbjct: 180 DPNLADISIPANDDAISSXRLI 201 >gi|40786903|gb|AAR89979.1| ribosomal protein subunit B [Blochmannia endosymbiont of Polyrhachis foreli] Length = 177 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 78/174 (44%), Positives = 115/174 (66%), Gaps = 1/174 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF RN HII+L +T+PM AL ++ + G+ILFV TK A Sbjct: 4 HQTRYWNPKMKPFIFGVRNKIHIINLEKTLPMFNHALSELNKISSNKGKILFVGTKRAAR 63 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNI 138 + + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + Sbjct: 64 EAIKNTAISCNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQYKDGTFTKLTKKEALIL 123 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 +R+ +KL+++L GI++M GLPD +F++ E +AI+EA L IP+ ++VDT S Sbjct: 124 KRELEKLEKSLGGIKNMNGLPDAIFIIGAAHECIAIKEANNLGIPVFSIVDTCS 177 >gi|222139886|ref|YP_002519953.1| ribosomal protein S2 [Ephedra equisetina] gi|220983554|dbj|BAH11321.1| ribosomal protein S2 [Ephedra equisetina] Length = 239 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 8/223 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ V GH+ NPKM YI ER N HII+L +T+ L +A ++ D + Sbjct: 17 FKDMIKVAVHLGHQKNELNPKMRCYILTERGNLHIINLVRTILFLSEACDLLMDAARKRK 76 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V TK A+D + AK++ + +N KW GG++TNW T + +++ R+L++ K Sbjct: 77 EFLLVGTKGYAADLIASTAKKTGCHYINYKWQGGLLTNWSTTKEKLERFRNLKQ---KYK 133 Query: 128 QGF-----TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G TKKE IE++ + L++ L+GI M LPD++ +VD +E A++E R L I Sbjct: 134 SGLFHRRRTKKEIALIEKQLELLQQYLEGIFYMKKLPDIVIIVDQQKESTAVRECRALGI 193 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P +++VDTN +PD VD IP NDD+ S+ L + + SA G Sbjct: 194 PTISLVDTNCDPDFVDIPIPANDDARGSVGLILNKLMSAVSSG 236 >gi|6650146|gb|AAF21741.1|AF055153_1 ribosomal protein subunit 2 [Verbena bonariensis] Length = 202 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGMHITNLTRTARFLSAACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 ++A++ V AA ++ +CVN KW GGM+TNW + K RDL E+ + N+ K Sbjct: 61 TNKAANSVARAAIKARCHCVNKKWPGGMLTNWSITETRLHKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEESTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRLI 201 >gi|162945945|gb|ABY20980.1| Rps2 [Thuja sutchuenensis] gi|162945954|gb|ABY20986.1| Rps2 [Thuja standishii] Length = 231 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 90/224 (40%), Positives = 130/224 (58%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++++ GV FGH WNPKM YIF ER ++HII+L+ T L +A + D RG Sbjct: 10 LKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLTYTARFLSEACDFVFDGAKRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V TK Q +D AA + + VN KW GM+TNW T ++K ++ L+ ++N Sbjct: 70 QFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKFKN---LMKQKN 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G FTKKE + R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIRYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP NDDS I L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDSRGPIRLILNKLILAIRTGKA 230 >gi|253729550|ref|YP_003029733.1| ribosomal protein S2 [Bambusa oldhamii] gi|255961376|ref|YP_003097569.1| ribosomal protein S2 [Dendrocalamus latiflorus] gi|246367060|gb|ACS94671.1| ribosomal protein S2 [Bambusa oldhamii] gi|255040253|gb|ACT99913.1| ribosomal protein S2 [Dendrocalamus latiflorus] Length = 236 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D ++G Sbjct: 10 LKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+ V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRAAYLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FHH-LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 189 SLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|17129602|dbj|BAB72239.1| ribosomal protein subunit 2 [Cistanche tubulosa] Length = 240 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 133/220 (60%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPK+ YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMLEAGVHFGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A++ V AA ++ + VN KWLGGM+TNW T + + RDL E+ + + Sbjct: 70 QFLIVGTKNKAANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKMGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ +++ ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP + Sbjct: 130 LNR-LPRRDSAVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|332287006|ref|YP_004421907.1| 30S ribosomal protein S2 [Chlamydophila psittaci 6BC] gi|325507145|gb|ADZ18783.1| 30S ribosomal protein S2 [Chlamydophila psittaci 6BC] Length = 245 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 124/196 (63%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ YIF E+N +II+L++T+ L+KAL + + ILFV TK QA + EAA Sbjct: 1 MKLYIFEEKNGLYIINLAKTLYQLRKALPQVCKVIKENKPILFVGTKKQAKCVIKEAAIE 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 + +Y V +WLGGM+TN T+ SI+ L +E+ L + + TKKE + ++ KL + Sbjct: 61 AGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEKDLTQNSSYLTKKEIALLAKRHQKLLKN 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L+GIR + P L+ VVD + EK+A+ EA++L IP++A+VDTN +P +DYVIP NDDS Sbjct: 121 LEGIRYLKKAPGLVIVVDPSYEKIAVAEAKKLGIPVLALVDTNCDPTPIDYVIPCNDDSL 180 Query: 209 RSIALFCDLVASAAID 224 +SI L + + ID Sbjct: 181 KSIRLIISTIKDSIID 196 >gi|185178866|ref|ZP_02964639.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024373|ref|ZP_02997039.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518450|ref|ZP_03003938.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225551250|ref|ZP_03772196.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209503|gb|EDU06546.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018641|gb|EDU56681.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998067|gb|EDU67164.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225379065|gb|EEH01430.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 351 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 136/217 (62%), Gaps = 2/217 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + G Sbjct: 56 SIVKLTESGAHIGLNPKKWNPKMANYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQNG 115 Query: 67 GRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLN 124 G ++FV T+ + + + A+R+ + V +WLGG +TN+ +S+S++K +L L + Sbjct: 116 GTVMFVGTRGRVVKELIKVEAERTNSFYVTQRWLGGTLTNFANISRSLKKFNSNLALLES 175 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E ++KKE++ I ++ KL++ GI+ M PD++ +VD + AI+EAR+L IP+ Sbjct: 176 EEINKYSKKEQIAINKETAKLEKFYGGIKTMKQRPDVLILVDPVNDVNAIKEARKLNIPV 235 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +A+ +TN++P L+DY+IP N+ S +SI L ++A A Sbjct: 236 IALANTNADPQLIDYIIPVNNYSVKSITLILGVLADA 272 >gi|11465574|ref|NP_045034.1| ribosomal protein S2 [Cyanidium caldarium] gi|14547997|sp|Q9TM33|RR2_CYACA RecName: Full=30S ribosomal protein S2, chloroplastic gi|6466430|gb|AAF13012.1|AF022186_184 unknown [Cyanidium caldarium] Length = 243 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 85/239 (35%), Positives = 139/239 (58%), Gaps = 1/239 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +LL++ GH WNPK +I + HIIDL +T+ + A + V G Sbjct: 4 SLSELLDASAHIGHSTSKWNPKFFPFIHMTKKGIHIIDLIKTIQQISVACMFLKKEVRNG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R+LFV TK+QAS V AK+ ++ +N +W GG++TNW T+ S++KL+ LEE + Sbjct: 64 KRVLFVGTKNQASKVVEREAKKCQEFYINQRWPGGLLTNWPTIKLSLKKLQLLEEKEKLD 123 Query: 127 NQGFT-KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G T KKE +++R+ KL + L+GI+ M PD++ +VD +REK I E ++L IP + Sbjct: 124 HLGSTSKKEEASMKREIQKLNKYLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTI 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 ++DTN NP V+ IP NDDS ++I L ++++ + ++ T++ E V Sbjct: 184 GILDTNCNPKSVNVPIPANDDSIKAIDLIVSKLSTSIFKAKLENNQFIENSTENLNEHV 242 >gi|308746026|ref|YP_003934547.1| ribosomal protein S2 [Cheilanthes lindheimeri] gi|302375459|gb|ADL29833.1| ribosomal protein S2 [Cheilanthes lindheimeri] Length = 238 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 121/219 (55%), Gaps = 7/219 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +G+ FGH+ WNPKM YIF ER HI+DL+QT + +A + D A G Sbjct: 13 MMAAGIHFGHQTQRWNPKMSSYIFTERRGVHILDLTQTARLPSEACDSVFDAAAEGKEFP 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 V TK Q +D + AA RS + VN KWLGGM+TNW T +LR + L +E++G Sbjct: 73 MVGTKHQVTDLIASAALRSQCHYVNEKWLGGMLTNWVTTE---TRLRRFQYLQTEEDRGG 129 Query: 130 ---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K+E + + +LK+ L GI+ M PD+ D + + A +E L IP + Sbjct: 130 FDRLPKQEAAILRGQLFRLKKCLGGIQYMSDSPDIATTTDQHEQSTAPRECSILGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +PDLVD IPGNDD+ SI D A A +G Sbjct: 190 IVDTDCDPDLVDVPIPGNDDARSSIRWILDKPALAIHEG 228 >gi|221142046|ref|ZP_03566539.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 176 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 75/175 (42%), Positives = 118/175 (67%), Gaps = 7/175 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ E Sbjct: 65 GQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM---E 121 Query: 127 NQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 G KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EA Sbjct: 122 EDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEA 176 >gi|2734693|gb|AAB93698.1| ribosomal protein subunit 2 [Sopubia cana] Length = 204 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 3/201 (1%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V FGH WNPKM YI +R HII+L++T L +A ++ +RG + L V TK Sbjct: 2 VHFGHGIRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFYAASRGKQFLIVGTK 61 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKK 133 ++ +D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K+ Sbjct: 62 NKVADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKSGRLNR-LXKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYKALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALF 214 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDARSSIRLI 201 >gi|165910463|gb|ABY73986.1| ribosomal protein S2 [Cuscuta veatchii] Length = 202 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 122/204 (59%), Gaps = 5/204 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI +R HI +L++T L +A ++ ++G + L Sbjct: 1 MLEARVHLGHSTRNWNPKMAPYISEKRKGIHITNLTRTARFLSEACDLVFYAASKGKKFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V T + A + V A+K++ + VN KWLGGM+TNW T + K RDL+ + ++ G Sbjct: 61 IVGTNNAADEAVARASKKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLK--MEQKRGGL 118 Query: 131 T---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP + + Sbjct: 119 NNLPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRTLGIPTICL 178 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSI 211 DTN +P+L D IP NDD+ SI Sbjct: 179 TDTNCDPNLSDIAIPANDDAIASI 202 >gi|57229305|gb|AAW45730.1| ribosomal protein subunit 2 [Cistanche phelypaea] Length = 214 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPK+ YI +R HI +L++T L +A ++ D +RG Sbjct: 4 LEEMLEAGVHFGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAASRGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A++ V AA ++ + VN KWLGGM+TNW T + + RDL E+ + + Sbjct: 64 QFLIVGTKNKAANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKMGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ +++ ++R+ +L+ L GI+ M LPD++ +VD + E A+QE L IP + Sbjct: 124 LNR-LPRRDSAVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALQECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|115391891|ref|YP_778479.1| ribosomal protein S2 [Jasminum nudiflorum] gi|122164984|sp|Q06RE2|RR2_JASNU RecName: Full=30S ribosomal protein S2, chloroplastic gi|110456212|gb|ABG74617.1| ribosomal protein S2 [Jasminum nudiflorum] Length = 238 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 130/222 (58%), Gaps = 5/222 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE--RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +++ +GV FGH WNPKM YI+ + R HI +L++T L +A ++ D +R Sbjct: 10 LEEMMVAGVHFGHPTKQWNPKMAPYIYAKVKRKGIHIPNLTRTARFLSEACDLVFDAASR 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELL 123 G L V TK +A+ V+ AA R+ + VN KWLGGM+TNW T + RDL E+ Sbjct: 70 GKEFLIVGTKPKAAGSVVRAAIRARCHYVNKKWLGGMLTNWFTTKTRLHTFRDLRMEQKT 129 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 130 GRLNR-LPKRDVAMLKRQLSRLQAYLGGIQYMTGLPDIVILVDQHEEYTALRECITLGIP 188 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 TICLIDTNCDPDLADLPIPANDDAKPSIRLILNKLVFAICEG 230 >gi|197131510|gb|ACH47273.1| ribosomal protein S2 [Erodium chrysanthum] Length = 252 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 132/224 (58%), Gaps = 9/224 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYI--FCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +L+ +GV FGH+ WNPKM +I + + THI +L++T L +A ++ D +R Sbjct: 10 LEELIAAGVHFGHKINKWNPKMAPFISIYPKYEGTHISNLTRTARRLAEACNLVFDAASR 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G L V TK +A++ V+ AA+R+ + VN KWLGG++TNW T ++K RDL + Sbjct: 70 GQSFLLVGTKKEAANSVLRAARRARCHYVNKKWLGGILTNWSTTQSMLRKFRDLR---TQ 126 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +G K++ ++R+ L++ L G++ M GLP ++ VVD RE A++E L Sbjct: 127 QKEGGLRRLPKRDAALLKRQLSHLQKYLGGVQYMTGLPQIVIVVDQQREFTALRECITLE 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + ++DT+ +PDLVD IP NDDS SI + + A G Sbjct: 187 IPTIGLIDTDCDPDLVDLPIPANDDSVSSIQFILNKLVFAICKG 230 >gi|156598638|gb|ABU85575.1| ribosomal protein S2 [Scaevola aemula] Length = 238 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 128/218 (58%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++++GV GHR WNP+M YI +RN HII+L +T L +A ++ ++G Sbjct: 10 LEEMMKAGVHLGHRTKKWNPRMAPYIAAKRNGKHIINLIRTARFLSEACDLVFYAASKGN 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V T+ + +D V AA ++ + VN KWL GM+TNW T+ + +QK R L K Sbjct: 70 QFLIVGTQKKEADSVARAAIKARCHYVNQKWLRGMLTNWSTIKERLQKFRALRAEQKKGF 129 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KK+ ++++ L++ +GI+ M LPD++ VVD +++ A++E L IP +++ Sbjct: 130 HRLPKKDAAMLKKQLAHLQKYFEGIQYMKRLPDIVIVVDQHKDYKALRECITLGIPTISL 189 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +DTN +PDL D IP NDDS SI L + + A G Sbjct: 190 IDTNCDPDLADLPIPANDDSRSSIRLILNKLIFAICKG 227 >gi|242910208|ref|YP_002970633.1| ribosomal protein S2 [Alsophila spinulosa] gi|218454877|gb|ACK77214.1| ribosomal protein S2 [Alsophila spinulosa] Length = 250 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 120/210 (57%), Gaps = 7/210 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +GV FGH+ WNP+M YIF ER HI+D +QT + +A + D A G L Sbjct: 13 MMGAGVHFGHQTQKWNPRMSPYIFTERKGVHILDPTQTARLSSEACDSVFDAAAEGKEFL 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 V TK Q +D V AA RS + VN KWLGG +TN T +LR + L N E+ G Sbjct: 73 TVGTKYQVADLVASAATRSRCHYVNEKWLGGTLTNRSTTE---TRLRRFQYLRNGEDTGG 129 Query: 130 ---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE ++R+ +LK+ L GI+ M LPD++ + D + + +A++E L IP + Sbjct: 130 FDRLPKKEAAILKRQLLRLKKYLGGIQYMSDLPDIVTITDQHEQSIALEECIILGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 VVDT+ +PDL D IPGNDD+ SI D Sbjct: 190 VVDTDRDPDLTDIPIPGNDDARSSIRRILD 219 >gi|226968678|ref|YP_002808638.1| small subunit ribosomal protein S2 [Micromonas sp. RCC299] gi|226431156|gb|ACO55562.1| small subunit ribosomal protein S2 [Micromonas sp. RCC299] Length = 215 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 132/211 (62%), Gaps = 6/211 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LLE+GV FGH+ WN KM YI +N HI+DL QT+ L+KA V+ R Sbjct: 4 LEALLEAGVHFGHQVGRWNSKMAPYIHETKNGVHILDLVQTLDDLEKARPVLK----RAK 59 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LFV T+ Q + + A++ + V+++W+GG++TNWKT+S +QKL L++ L+++ Sbjct: 60 NVLFVGTRPQIAPIIETTAQKVNGHYVSTRWVGGLLTNWKTMSMCLQKLNRLDKQLSEDG 119 Query: 128 Q--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G +KK L ++++R +L++ G+R + LPDL+ +V EK A+ E +RL IP + Sbjct: 120 KASGLSKKAILQLKKQRARLEKFFGGLRGLSELPDLVVIVGQPHEKNAVNECQRLGIPTI 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 ++D+N +P + Y I NDDS+RS+ + + Sbjct: 180 TLLDSNCDPTMSTYGITANDDSTRSVEIILE 210 >gi|297243500|ref|ZP_06927432.1| ribosomal protein S2 [Gardnerella vaginalis AMD] gi|296888545|gb|EFH27285.1| ribosomal protein S2 [Gardnerella vaginalis AMD] Length = 224 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 10/209 (4%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M+ KA I TVA G +LFV TK QA + V A R V +WLGGM+TN++TVS Sbjct: 1 MIDKAYDFIKQTVAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVCERWLGGMLTNFQTVS 60 Query: 111 QSIQKLRDLEEL--LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 +++L++LEE+ + G TKKE L +ER++DKL + L GIR+M P MFVVD N Sbjct: 61 TRVKRLKELEEMDFSDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDIN 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +E LA++EA +L IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ Sbjct: 121 KEALAVEEAHKLGIPVVAIVDTNTDPEAVEYPIPANDDAIRGIELLTSLMADAVAEGLL- 179 Query: 229 QHSYMGADTK-------SAGETVVHSKEG 250 +H+ GA ++ +A E + +KEG Sbjct: 180 EHAGKGAKSEGNDAQPMAAWEKELLTKEG 208 >gi|255024628|ref|ZP_05296614.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J1-208] Length = 197 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 75/171 (43%), Positives = 116/171 (67%), Gaps = 1/171 (0%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A + + + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ Sbjct: 1 AFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQ 60 Query: 115 KLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 L+ +E + + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A Sbjct: 61 HLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIA 120 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + EAR+L IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 121 VAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 171 >gi|165910487|gb|ABY73998.1| ribosomal protein S2 [Jacquemontia tamnifolia] Length = 202 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 124/204 (60%), Gaps = 5/204 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++++GV FGH WNPKM YI +R HI +L +T L +A ++ D RG + L Sbjct: 1 MMKAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLIRTARFLSEACDLVFDAAKRGKQFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V TK +A+D V A+ ++ + VN KWLGGM+TNW T ++K RDL + ++ GF Sbjct: 61 IVGTKKKAADSVARASIKARCHYVNKKWLGGMLTNWSTTEMRLEKFRDLR--MKQKMGGF 118 Query: 131 T---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 K++ ++R+ +L+ + GI+ M GLPD++ ++D ++E A++E L IP + + Sbjct: 119 NRLPKRDATMLKRQLARLQTYVGGIKYMTGLPDIVIIIDQHKEYTALRECITLGIPTICL 178 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSI 211 +DTN +P+L D IP NDD+ SI Sbjct: 179 IDTNCDPNLSDISIPANDDAISSI 202 >gi|237757013|ref|ZP_04585468.1| ribosomal protein S2 [Sulfurihydrogenibium yellowstonense SS-5] gi|237690831|gb|EEP59984.1| ribosomal protein S2 [Sulfurihydrogenibium yellowstonense SS-5] Length = 242 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/207 (42%), Positives = 129/207 (62%), Gaps = 8/207 (3%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +AL +++ VA G ILF+ TK QA + + E AKR + VN KWLGGM TN+ TV +SI Sbjct: 1 QALDFVTEQVANGAEILFLGTKKQAQNIIEEEAKRCGAFYVNYKWLGGMFTNFATVKKSI 60 Query: 114 QKLRDLEELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 KLR L+++ E +G KKE + ++++KL++ L GI DM +PD++FVVDT R Sbjct: 61 AKLRKLQKM---EAEGVFEVLPKKEARTLMKQKEKLEKYLKGIVDMDRVPDIIFVVDTVR 117 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 E A+ EA +L + +VA+ DTN +PD +DY IPGNDD+ ++I L +A A I+G + Sbjct: 118 ENNAVTEANKLGVHVVAIADTNCDPDKIDYPIPGNDDAIKAIQLITSKIADAVIEGKKMR 177 Query: 230 HSYMGA-DTKSAGETVVHSKEGMQLEE 255 S A +TK+ E ++ E + E Sbjct: 178 ESIGTAVETKTIEEELLARAEAANVVE 204 >gi|290487156|gb|ADD29962.1| ribosomal protein S2 [Ximenia americana] Length = 236 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 127/220 (57%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISGKRKGIHITNLTRTARFLSEACDLVFDAASGGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + + RDL E+ + Sbjct: 70 QFLIVGTKNKVADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHRFRDLRTEQKAGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E + +E L IP + Sbjct: 130 LNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYMTFRECIALGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLATISIPANDDAIASIRLILNKLVFAICEG 228 >gi|162945951|gb|ABY20984.1| Rps2 [Thuja koraiensis] Length = 231 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/224 (40%), Positives = 130/224 (58%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++++ GV FGH WNPKM YIF ER ++HII+L T L +A + D RG Sbjct: 10 LKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLIYTARFLSEACDFVFDGAKRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V TK Q +D AA + + VN KW GM+TNW T ++K ++ L+ ++N Sbjct: 70 QFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKFKN---LMKQKN 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G FTKKE + R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIRYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP ND+S SI L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDNSRGSIRLILNKLILAIRTGKA 230 >gi|162945960|gb|ABY20990.1| Rps2 [Thujopsis dolabrata] Length = 231 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 130/224 (58%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++++ GV FGH WNPKM YI ER N+HI++L+ T L +A + D RG Sbjct: 10 LKEMVKVGVHFGHETRKWNPKMAPYILKERKNSHILNLTYTARFLSEACDFVFDGAKRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V TK Q +D AA + + VN KWL GM+TNW T ++K ++L + ++N Sbjct: 70 QFMIVGTKHQTADAAKLAALAARCHYVNKKWLAGMLTNWFTTEARLEKFKNLTK---QKN 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G FTKKE ++R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILKRELNKLQEDLGGIRYMTKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP NDD I L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGRGPIRLILNKLILAIRTGRA 230 >gi|41058645|gb|AAR99309.1| ribosomal protein subunit B [Candidatus Blochmannia pennsylvanicus] Length = 172 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 5/174 (2%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF RN HIIDL T M ++AL ++ A G+ILFV TK AS Sbjct: 1 HQTRYWNPKMKPFIFGVRNKIHIIDLETTSVMFRQALIELNKIAALKGKILFVGTKRAAS 60 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERL 136 + V + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + ++ F TKKE L Sbjct: 61 ESVKKTALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQDGTFKKLTKKEAL 118 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 + R+ L+ +L GI++MGGLPD +F V E +AI+EA L IP+ ++VDT Sbjct: 119 ILNRELINLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEANSLGIPVFSIVDT 172 >gi|2734657|gb|AAB93681.1| ribosomal protein subunit 2 [Castilleja linariifolia] Length = 204 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 3/198 (1%) Query: 19 GHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQA 78 GH WNPKM YI +R HI +L++T L +A ++ D + G + L V TK++A Sbjct: 5 GHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGTKNKA 64 Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERL 136 +D V AA ++ +CVN KWLGG++TNW T +QK RDL E+ + N+ K++ Sbjct: 65 ADLVAWAAIKARCHCVNKKWLGGILTNWSTTETRLQKFRDLRMEQKTGRLNR-LPKRDAA 123 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 124 VVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 183 Query: 197 VDYVIPGNDDSSRSIALF 214 D IP NDD+ SI L Sbjct: 184 ADISIPANDDAISSIRLI 201 >gi|6650150|gb|AAF21743.1|AF055155_1 ribosomal protein subunit 2 [Paulownia tomentosa] Length = 197 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 119/197 (60%), Gaps = 3/197 (1%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H WNPKM YI +R HI +L++T L +A ++ D +RG + L V TK++A+ Sbjct: 1 HGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAA 60 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLN 137 D V AA ++ +CVN KWLGGM+TNW T + K RDL E+ + N+ K++ Sbjct: 61 DSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPKRDAAV 119 Query: 138 IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLV 197 ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 120 VKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDLA 179 Query: 198 DYVIPGNDDSSRSIALF 214 D IP NDD+ SI L Sbjct: 180 DISIPANDDAISSIRLI 196 >gi|162945948|gb|ABY20982.1| Rps2 [Thuja occidentalis] Length = 231 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 130/224 (58%), Gaps = 7/224 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++++ GV FGH WNPKM YIF ER ++HII+L T L +A + D RG Sbjct: 10 LKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLIYTARFLSEACDFVFDGAKRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + V TK Q +D AA + + VN KW GM+TNW T ++K ++ L+ ++N Sbjct: 70 QFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKFKN---LMKQKN 126 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G FTKKE + R+ +KL+ L GI+ M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIKYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP ND+S SI L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDNSRGSIRLILNKLILAIRTGKA 230 >gi|164597820|ref|NP_084689.2| ribosomal protein S2 [Oenothera elata subsp. hookeri] gi|169142862|ref|YP_001687285.1| ribosomal protein S2 [Oenothera glazioviana] gi|169142947|ref|YP_001687369.1| ribosomal protein S2 [Oenothera biennis] gi|172045797|sp|Q9MTM2|RR2_OENEH RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573615|sp|B0Z4W2|RR2_OENBI RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573616|sp|B0Z546|RR2_OENGL RecName: Full=30S ribosomal protein S2, chloroplastic gi|159793120|gb|ABW98874.1| ribosomal protein S2 [Oenothera biennis] gi|159895474|gb|ABX10039.1| ribosomal protein S2 [Oenothera glazioviana] gi|162423687|emb|CAB67154.2| ribosomal protein S2 [Oenothera elata subsp. hookeri] Length = 236 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI+ R HI +L++T L +A ++ D +RGG Sbjct: 10 LEEMMEAGVHFGHGIKKWNPRMAPYIYANRKGIHITNLTKTARFLAEACDLVFDAASRGG 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+ V AA ++ + VN KWLGGM+TNW T + + RDL E+ + Sbjct: 70 QFLIVGTKKQAAALVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHQFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP + Sbjct: 130 LNR-LPKRDAAILKRQLSHLQTYLGGIKYMTGLPDILIILDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT+ +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTDCDPDLADLPIPANDDAMASIRLILNKLVFAICEG 228 >gi|56122480|gb|AAV74365.1| Rps2 [Acorus gramineus] Length = 236 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH NP+M YI +R HI +L++T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKLNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASGGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK +A+D V AA R+ + VN KWLGGM TNW T +Q RDL E+ K Sbjct: 70 HFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQNFRDLRAEQKAGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ K++ ++R+ L+ L GI+ M GLPD++ +VD + A++E L IP + Sbjct: 130 IDR-LPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECVILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTNS+PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|240047248|ref|YP_002960636.1| 30S ribosomal protein S2 [Mycoplasma conjunctivae HRC/581] gi|239984820|emb|CAT04808.1| 30S ribosomal protein S2 [Mycoplasma conjunctivae] Length = 314 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 85/222 (38%), Positives = 141/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+G FGH++ W+PKM YI +RN THIID+ +T +L+ A ++++ Sbjct: 30 PIVSKQKLLEAGAYFGHKSSQWHPKMAPYILKRKRNETHIIDVLKTQKILEIAYKLVNKF 89 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 90 AQKGATFLFVGTKKQAKKVIEEQAIRTNSIYVSDRWLGGTITNSRTILSRLKTMEELEKQ 149 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDM--GGLPDL-MFVVDTNREKLAIQEARR 179 + +G+TKKE L + KL++ L+GIR++ + L M V D N++ +A++EAR+ Sbjct: 150 AERNFEGYTKKEGLLKHKTLAKLQKNLNGIRNLKENSINSLVMLVADPNKDIIAVKEARK 209 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 I I+ ++DTN++P LVD+ IP NDDS++S+ L ++A A Sbjct: 210 KGIKIIGIIDTNTDPALVDFGIPANDDSTKSLTLIFTILADA 251 >gi|301353375|ref|YP_003795569.1| ribosomal protein S2 [Pteridium aquilinum subsp. aquilinum] gi|301016293|gb|ADK47580.1| ribosomal protein S2 [Pteridium aquilinum subsp. aquilinum] Length = 238 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 120/219 (54%), Gaps = 7/219 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +G+ FGH+ WNP+M YIF +R HI+DL+QT + +A ++ D A G Sbjct: 13 MMAAGIHFGHQTQKWNPRMSPYIFTQRKGVHILDLTQTARLSSEACDLVFDAAAEGKESP 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 V TK Q +D V AA RS + VN KWLGG TNW T +LR + L E+ G Sbjct: 73 TVGTKHQVADLVASAATRSQCHYVNEKWLGGTSTNWFTTE---TRLRRFQYLQTGEDTGG 129 Query: 130 ---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K+E + ++ KLK+ L GI+ M PD+ + D + + +A++E L IP + Sbjct: 130 FDRLPKQEAATLRKQLFKLKKCLGGIQYMSDSPDIATIADQHEQSIALKECIILGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDT+ +PDLVD IPGNDD+ I D A +G Sbjct: 190 VVDTDCDPDLVDIPIPGNDDARSPIRRILDKPTLAICEG 228 >gi|47569105|ref|ZP_00239794.1| ribosomal protein S2 [Bacillus cereus G9241] gi|47554267|gb|EAL12629.1| ribosomal protein S2 [Bacillus cereus G9241] Length = 177 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 73/170 (42%), Positives = 117/170 (68%), Gaps = 5/170 (2%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 + D A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D Sbjct: 1 MRDISAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKD 60 Query: 119 LEELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 +E + +E+ F KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ Sbjct: 61 IERM--QEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVA 118 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 EAR+L IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 119 EARKLHIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 168 >gi|10179716|gb|AAG13850.1| ribosomal protein subunit 2 [Thunbergia alata] Length = 202 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 3/201 (1%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V FGH W P M YI +R HI +L++T L +A ++ D + G + L V TK Sbjct: 2 VXFGHGIRKWXPXMAPYISAKRKGIHITNLTRTASFLSEACDLVFDAXSGGKQFLIVGTK 61 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKK 133 ++A+D V AA ++ +CVN KWLGGM+TNW T + K R L E+ + N+ K+ Sbjct: 62 NKAADSVARAAIKAQCHCVNKKWLGGMLTNWSTTETRLHKFRGLRMEQKTGRLNR-LPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++RK +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRKLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALF 214 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLI 201 >gi|165910475|gb|ABY73992.1| ribosomal protein S2 [Cuscuta epilinum] Length = 202 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 123/204 (60%), Gaps = 5/204 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++++GV GH WNPKM +IF +R + HII+L T L +A ++ D +RG L Sbjct: 1 MMQAGVHLGHGTRKWNPKMAPFIFTKRKDIHIINLIGTARFLLEACDLVFDAASRGKNFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V T ++ ++ V A+ ++ + VN KWL GM+TNW T +QK RDL + ++ GF Sbjct: 61 IVGTNNKTANLVARASIKARCHYVNKKWLAGMLTNWSTTETRLQKFRDLR--MKQKKGGF 118 Query: 131 ---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 K++ ++R+ + + L GIR M GLPD++ ++D ++E +A++E L IP + + Sbjct: 119 HHLPKRDATVLKRQLARFETYLGGIRYMTGLPDIVIIIDQHKEYMALRECITLGIPTICL 178 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSI 211 +DTN +P+L D IP NDD+ SI Sbjct: 179 IDTNCDPNLSDISIPANDDAISSI 202 >gi|165910485|gb|ABY73997.1| ribosomal protein S2 [Calystegia sepium] Length = 204 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 119/199 (59%), Gaps = 3/199 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L+ T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTVTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K++ +D V A+ R+ + VN KWLGGM+TNW T + K RDL E+ + N+ K Sbjct: 61 KNKVADSVARASIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGGLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L G++ M GLPD+ +VD ++E A++E L IP + ++DTN Sbjct: 120 RDATMLKRQLARLQTYLGGMKYMTGLPDIAIIVDQHKEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSI 211 +P+L D IP NDD+ SI Sbjct: 180 DPNLSDISIPANDDAISSI 198 >gi|255546731|ref|XP_002514424.1| 30S ribosomal protein S2, putative [Ricinus communis] gi|223546420|gb|EEF47920.1| 30S ribosomal protein S2, putative [Ricinus communis] Length = 317 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++++GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 94 VQEMMKAGVHFGHGTRKWNPRMAPYISTKRKGIHITNLTRTAHFLSEACDLVFDAASRRK 153 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA R+ + VN KWLGG++TNW T IQK RDL E+ + Sbjct: 154 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRIQKFRDLRMEQKTGR 213 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K + +ER+ L+ L I+ M GLPD++ +VD + ++E L IP + Sbjct: 214 LNR-LPKGDAARLERQLAHLQTYLGRIKYMMGLPDIVIIVDQQEDYTTLRECITLGIPTI 272 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN + DL D IP NDD+ SI L + + A +G Sbjct: 273 CLIDTNCDLDLADISIPANDDAIASIRLILNKLVFAICEG 312 >gi|4469299|emb|CAB38449.1| 30S ribosomal protein S2 [Prototheca wickerhamii] Length = 257 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/245 (33%), Positives = 136/245 (55%), Gaps = 14/245 (5%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +++SG+ FGH WNP+M+ +I+ +R+ HI+DL QT +L L + + +G + L Sbjct: 14 MVQSGMHFGHFTSEWNPRMQPFIYGKRHGRHILDLVQTYYLLNNLLAFLEKSAMQGKKFL 73 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQS---IQKLRDLEELLNKEN 127 FV TK Q + + + A Y VN +WLGGM+TNWKT+ S +Q+ R E+L E Sbjct: 74 FVGTKKQIAPLIAKTAISCNSYYVNQRWLGGMLTNWKTIQNSLYQLQEFRKAEQL--GEW 131 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KKE +R++ +L + L G+ +M LPD++ ++ E A++E R+L I V + Sbjct: 132 NLLKKKEIAQKKRQKLRLDKNLSGLENMKSLPDIVIIIGQAEELNAVKECRQLGITTVTL 191 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 +D+N +P L D+ IP NDDS ++ A I G T +A +++V++ Sbjct: 192 LDSNCDPFLADWYIPANDDSVAAVQYLLSNFKEAIIS---------GQKTNNANQSLVNA 242 Query: 248 KEGMQ 252 K ++ Sbjct: 243 KSNIK 247 >gi|295065721|ref|YP_003587661.1| ribosomal protein S2 [Anomochloa marantoidea] gi|251765245|gb|ACT15399.1| ribosomal protein S2 [Anomochloa marantoidea] Length = 239 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/230 (35%), Positives = 131/230 (56%), Gaps = 5/230 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G Sbjct: 10 LKEMIETGVHFGHGIKKWNPKMAPYILAKRKGIHITNLARTARFLSEACDLVFDAASQGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK + + V AA R+ + VN KW GM+TNW + + RDL EE + K Sbjct: 70 SFLIVGTKKRVAHSVASAAIRARCHYVNKKWFRGMLTNWSITKTRLSQFRDLRAEEKIGK 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N K++ + +K L+R L GI+ M LPD++ V+D +E +A++E L IP + Sbjct: 130 FNH-LPKRDAAILRQKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYM 233 +++DTN +PDL + IP NDD+ SI + + A +G + +H Y+ Sbjct: 189 SLIDTNCDPDLANISIPANDDTMTSIRWILNKLVFAIYEGRSVYIRHHYV 238 >gi|195928755|gb|ACG56057.1| ribosomal protein subunit 2 [Agalinis obtusifolia] gi|195928759|gb|ACG56059.1| ribosomal protein subunit 2 [Agalinis obtusifolia] Length = 218 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R H+ +L++T L + +I D + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGKHVTNLTRTARFLSEICDLIFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T +A+D V AA ++ + VN KW GM+TNW +QKLRDL E+ + Sbjct: 64 QFLIVGTPKKAADLVARAAIKARCHWVNKKWFRGMLTNWSITETRLQKLRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M LPD++ +VD ++E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTELPDIVIIVDQHKEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPSNDDARSSIRLI 211 >gi|224501401|ref|ZP_03669708.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL R2-561] Length = 184 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 73/157 (46%), Positives = 111/157 (70%), Gaps = 1/157 (0%) Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKEN 127 ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E + + Sbjct: 2 ILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTF 61 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ + Sbjct: 62 EVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGI 121 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 122 VDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 158 >gi|195928761|gb|ACG56060.1| ribosomal protein subunit 2 [Agalinis obtusifolia] Length = 217 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R H+ +L++T L + +I D + G Sbjct: 4 LEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGKHVTNLTRTARFLSEICDLIFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T +A+D V AA ++ + VN KW GM+TNW +QKLRDL E+ + Sbjct: 64 QFLIVGTPKKAADLVARAAIKARCHWVNKKWFRGMLTNWSITETRLQKLRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M LPD++ +VD ++E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTELPDIVIIVDQHKEYTALRECITLGIPTI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++DTN +PDL D IP NDD+ SI L Sbjct: 183 CLIDTNCDPDLADISIPSNDDARSSIRLI 211 >gi|321310950|ref|YP_004193279.1| 30S ribosomal protein S2 [Mycoplasma haemofelis str. Langford 1] gi|319802794|emb|CBY93440.1| ribosomal protein S2 [Mycoplasma haemofelis str. Langford 1] Length = 262 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 134/218 (61%), Gaps = 3/218 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +L+E G R WNPKM+ YI + ++ D + L A I D V G Sbjct: 5 SVEKLVECECNLGLRLRYWNPKMKDYISGKERGRYMFDPNMISEFLGNAYGYILDLVKAG 64 Query: 67 GRILFVATKSQ-ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 I+FV K++ S + EAA R + +WLGG++TN+KT+S +I+KL +L ELL N Sbjct: 65 ADIMFVGVKNKLTSGIIKEAASRVEALYLTQRWLGGLLTNFKTISLNIKKLNELTELLEN 124 Query: 125 KENQ-GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E Q G+TKKE + +++DKL++ G++++ LP+L+ V + + A+QEA+++ IP Sbjct: 125 PELQEGYTKKEIIQFSKQKDKLEKFYGGVKNLQRLPNLLVVFNPVEDAAAVQEAKKVGIP 184 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 ++A+ + N++PD VD+VIPGN+ S +S+ L +L+ A Sbjct: 185 VIALSNINTDPDQVDFVIPGNNKSMKSVYLIANLLCDA 222 >gi|170784780|ref|YP_001718696.1| ribosomal protein S2 [Trachelium caeruleum] gi|209573646|sp|A9QC56|RR2_TRACE RecName: Full=30S ribosomal protein S2, chloroplastic gi|156598791|gb|ABU85649.1| ribosomal protein S2 [Trachelium caeruleum] gi|157267528|gb|ABV26521.1| ribosomal protein S2 [Trachelium caeruleum] Length = 248 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 127/226 (56%), Gaps = 10/226 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIF---CERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ +++++ V GH WNPKM YIF R H+ +L T L +A V+ + Sbjct: 9 TLDEMMDASVHLGHDTKQWNPKMAPYIFPKCTTRKGIHLTNLFTTARFLSEACDVVFNAA 68 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +R + L V TK +A+D V+ AA R+ + VN KWL GM+TNW T + K RDL Sbjct: 69 SRENQFLIVGTKKKAADSVLRAAIRAQCHYVNKKWLSGMLTNWSTTETRLHKFRDLRI-- 126 Query: 124 NKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 KE +G K++ ++R+ L+R+L GI+ M LPD + ++D ++ A++E + Sbjct: 127 -KEKRGRLKRLPKRDAAILKRQLSHLQRSLGGIKYMTKLPDFVIIIDQQKDYTALRECIK 185 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP ++++DTNS+PDL IP NDDS SI + + A +G Sbjct: 186 LGIPTISLIDTNSDPDLASLSIPANDDSRSSIKFILNKLVFAIREG 231 >gi|165910469|gb|ABY73989.1| ribosomal protein S2 [Cuscuta indecora] Length = 202 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 5/200 (2%) Query: 17 QFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 GH WNPKM YI R HII+L++T L +A ++ D +RG + L V T + Sbjct: 1 HLGHSTRNWNPKMAPYILANRKGIHIINLTKTARFLSEACDLVFDAASRGKKFLIVGTNN 60 Query: 77 QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKK 133 A + + A+ RS + VN KWLGG++TNW T ++ RDL+ + K F TKK Sbjct: 61 VADEAIARASIRSRCHYVNKKWLGGLLTNWSTTETRLETFRDLK--IKKRGGRFNNITKK 118 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 E +RK D+L++ L GI+ M LPD++ ++D ++E A+QE + L IP + ++DT+ + Sbjct: 119 EATMFQRKLDRLQKYLGGIQYMTELPDIVIIIDQHKEFTALQECKTLGIPTICLIDTDCD 178 Query: 194 PDLVDYVIPGNDDSSRSIAL 213 P L + IP NDD+ SI Sbjct: 179 PHLSEIAIPANDDAIASIKF 198 >gi|2734649|gb|AAB93677.1| ribosomal protein subunit 2 [Buchnera floridana] Length = 205 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 4/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GVQFGH WNPKM YI + HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVQFGHVPRKWNPKMAPYISAKHKGIHITNLTRTARFLSEACDLVFYAASRGKQFLIVGT 60 Query: 75 -KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFT 131 K +A+D V AA ++ + VN KWLGGM+TNW + K RDL E+ + N+ Sbjct: 61 QKKKAADLVAWAAIKARCHFVNKKWLGGMLTNWSITETKLHKFRDLRIEQRAGRLNR-LP 119 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 K++ ++R+ +L+R L GI+ M GLPD++ ++D + E A++E L IP + ++DTN Sbjct: 120 KRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIILDQHEEYKALRECITLGIPTICLIDTN 179 Query: 192 SNPDLVDYVIPGNDDSSRSIAL 213 +PDL D+ IP NDD SI L Sbjct: 180 CDPDLADFSIPANDDGRSSIRL 201 >gi|165910465|gb|ABY73987.1| ribosomal protein S2 [Cuscuta campestris] Length = 204 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V GH NPKM YI +R HI +L++T L +A ++ ++G + L V T Sbjct: 2 VHLGHSTLNCNPKMTPYISAKRKGIHITNLTRTARFLSEACDLVFYAASKGKKFLIVGTN 61 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKE 134 + A + V A+K + + VN KWLGGM+TNW T +QK RDL K KKE Sbjct: 62 NAADEAVARASKSARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKKGGLNNLPKKE 121 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++RK +L++ L GI+ M GLPD++ ++D +++ A+QE R L IP ++++DTN +P Sbjct: 122 ATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKDYTALQECRTLGIPTISLIDTNCDP 181 Query: 195 DLVDYVIPGNDDSSRSI 211 +L D IP NDD+ SI Sbjct: 182 NLSDIAIPANDDAMASI 198 >gi|2734661|gb|AAB93683.1| ribosomal protein subunit 2 [Cycnium racemosum] Length = 205 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 121/205 (59%), Gaps = 4/205 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHLGHGPRKWNPKMAPYISGKRKGIHITNLTRTARFLSEACDLVFYAASRGKQFLIVGT 60 Query: 75 -KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFT 131 K +A+D V AA ++ + VN KWLGGM+TNW T + K RDL E+ + N+ Sbjct: 61 QKKKAADSVAWAAIKARSHFVNKKWLGGMLTNWSTTETRLHKFRDLRMEQRAGRLNR-LP 119 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 K++ ++R+ +L+R L GI+ M GLPD++ ++D + E A++E L IP + ++DTN Sbjct: 120 KRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTICLIDTN 179 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCD 216 +PDL D IP NDD+ SI L + Sbjct: 180 CDPDLADLSIPANDDARSSIRLILN 204 >gi|20379255|gb|AAF21733.2|AF055145_1 ribosomal protein subunit 2 [Orobanche caryophyllacea] Length = 204 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 5/203 (2%) Query: 15 GVQFGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 GV FGH WNPKM YI+ + + HII+ +T L +A ++ D +RG + L V Sbjct: 1 GVHFGHGIKKWNPKMAPYIYISAKHKDIHIINXIKTARFLSEACNLVFDAASRGKQFLIV 60 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGF 130 TK Q ++ V AA ++ +CVN KWLGG +TNW T + + RDL E+ + + + Sbjct: 61 GTKKQTANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRIEQKMGRFKR-L 119 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 K++ +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DT Sbjct: 120 PKRDAAVCKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDT 179 Query: 191 NSNPDLVDYVIPGNDDSSRSIAL 213 N +PDL B+ IP NDDS SI L Sbjct: 180 NCDPDLABFSIPANDDSIFSIRL 202 >gi|160177566|sp|A7M955|RR2_CUSRE RecName: Full=Plastid 30S ribosomal protein S2 Length = 236 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 132/229 (57%), Gaps = 8/229 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M +I +R HII++++T L +A ++ D RG Sbjct: 10 LEEMMGAGVHFGHGTRKWNPQMAPFIAAKRKGIHIINITRTARFLSEACDLVFDAARRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V T ++A+D V A++++ + VN KWL GM+TNW + K RDL + ++ Sbjct: 70 KFLIVGTNNKAADSVARASRKARCHYVNKKWLAGMLTNWSITETRLNKFRDLR--MEQKK 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 128 GGLNHLLKRDATMFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DTN +P+L D IP NDD+ SI + + A +G + SY+ Sbjct: 188 ICLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEG---RFSYL 233 >gi|261314116|ref|ZP_05953313.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] gi|261303142|gb|EEY06639.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 121 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 68/112 (60%), Positives = 91/112 (81%) Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +N+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL IP+VAV+D+N +PD Sbjct: 1 MNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGIPVVAVIDSNCDPD 60 Query: 196 LVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E V Sbjct: 61 QIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVEAPVEP 112 >gi|317134111|ref|YP_004123443.1| ribosomal protein S2 [Rhizanthella gardneri] gi|255985042|gb|ACU46589.1| ribosomal protein S2 [Rhizanthella gardneri] Length = 258 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 82/223 (36%), Positives = 125/223 (56%), Gaps = 3/223 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI + HI +L+ T L +A ++ + + G Sbjct: 11 LEEMMEAGVHFGHGTKKWNPRMAPYISAKHKGIHITNLTITARFLSEACNLVFEAASHGK 70 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++ +D V AA R+ VN KW GGM+TNW T + KLR+L E+ + K Sbjct: 71 KFLIVGTKNKTADLVASAAIRARCNYVNKKWPGGMLTNWSTTETRLHKLRNLIAEQKMGK 130 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q TK + + + RK L+ L GI+ M LPD++ +VD ++ ++E L IP + Sbjct: 131 L-QRLTKGKAVMLNRKLSILQTYLVGIQYMARLPDIVIIVDQQKDYKVLKECAILGIPTI 189 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++DTN +PD D IP NDD+ SI L + SA GI + Sbjct: 190 CLIDTNCDPDCADISIPANDDAITSIQLILTKLVSAIYKGIKK 232 >gi|30352023|ref|NP_848049.1| ribosomal protein S2 [Adiantum capillus-veneris] Length = 235 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +G+ FGH+ WNPKM YIF ER HI+DL+QT +L +A + D G Sbjct: 13 MMAAGIHFGHQTQRWNPKMSPYIFTERKGVHILDLTQTARLLSEACDSVFDAAVEGKEFP 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQG 129 V TK+Q +D ++ AA +S + VN KWL G +TNW T +++ + L+ + E Sbjct: 73 MVGTKNQVTDLIVSAALKSQCHYVNEKWLAGTLTNWVTTETRLRRFQHLQTGGDLGEFDR 132 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K+E ++ +LK+ L GI+ M PD+ + D + +A++E IP + +VD Sbjct: 133 LPKREAAILKGXLVRLKKCLGGIQYMSDSPDIAIITDQHEXSIALKECSIPGIPTICIVD 192 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 T+ +PDLVD IPGNDD+ SI D A A +G Sbjct: 193 TDCDPDLVDVPIPGNDDARSSIRWILDKPALAISEG 228 >gi|41058637|gb|AAR99305.1| ribosomal protein subunit B [Candidatus Blochmannia ocreatus] Length = 177 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 114/177 (64%), Gaps = 7/177 (3%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF RN HII+L T+ M ++AL + + + G+ILFV TK A Sbjct: 4 HQTRYWNPKMKPFIFGIRNKIHIINLEITMLMFKQALFELKNITSLKGKILFVGTKRAAR 63 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKER 135 + + + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE N+ G TKKE Sbjct: 64 ETIKKTALSCNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE---NQSKDGTFKKVTKKEA 120 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 L + R+ L+ +L GI++MGGLP+ +F + E++AI+EA L IP+ ++VDT S Sbjct: 121 LILNRELISLENSLGGIKNMGGLPEAIFAIGATHEQIAIKEAHSLGIPVFSIVDTCS 177 >gi|169142712|ref|YP_001687139.1| ribosomal protein S2 [Oenothera argillicola] gi|169143033|ref|YP_001687453.1| ribosomal protein S2 [Oenothera parviflora] gi|209573614|sp|B0Z4M8|RR2_OENAR RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573617|sp|B0Z5D0|RR2_OENPA RecName: Full=30S ribosomal protein S2, chloroplastic gi|159792950|gb|ABW98706.1| ribosomal protein S2 [Oenothera argillicola] gi|159895559|gb|ABX10123.1| ribosomal protein S2 [Oenothera parviflora] Length = 236 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI+ R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGIKKWNPRMAPYIYANRKGIHITNLTKTARFLAEACDLVFDAASRGR 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK QA+ V AA ++ + VN KWLGGM+TNW T + + RDL E+ + Sbjct: 70 QFLIVGTKKQAAALVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHQFRDLRTEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP + Sbjct: 130 LNR-LPKRDAAILKRQLSHLQTYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT+ +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTDCDPDLADLPIPANDDAMASIRLILNKLVFAICEG 228 >gi|309322135|ref|YP_003934050.1| ribosomal protein S2 [Geranium palmatum] gi|197131518|gb|ACH47277.1| ribosomal protein S2 [Geranium palmatum] gi|300069228|gb|ADJ66349.1| ribosomal protein S2 [Geranium palmatum] Length = 238 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 3/219 (1%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +LL +GV FGHR WNP+M YI + THI +L +T L +A ++ + G Sbjct: 12 ELLAAGVHFGHRIKKWNPRMAPYILISPKSKGTHITNLIRTAHFLAEACHLVFYAASTGK 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V TK A++ V+ AA ++ + VN KWL GM+TNW T ++K RDL Sbjct: 72 SFLIVGTKKAAANFVVRAAIKARCHYVNKKWLAGMLTNWSTTETRLRKFRDLRAAQKTGK 131 Query: 128 QG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 G K++ ++R+ L++ L G++ M GLPD++ +V + E A++E L IP + Sbjct: 132 LGRLPKRDAAILKRQLTHLQKYLGGVQYMTGLPDIVIIVGQHNEFTALRECITLGIPTIG 191 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT+ +PDLVD IP NDDS RSI + + A +G Sbjct: 192 LIDTDCDPDLVDLPIPANDDSRRSIRFILNKLVFAICEG 230 >gi|89243570|gb|ABD64904.1| ribosomal protein subunit 2 [Boschniakia rossica] Length = 187 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 7/189 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L+ T L +A ++ D +RG + LFV TK++ Sbjct: 1 FGHGTRKWNPKMAPYISAKRKGIHITNLTITARFLIEACNLVFDAASRGKKFLFVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 A+D V AA R+ +CVN KWLGGM+TNW + KLRD L+ ++N G F K+ Sbjct: 61 AADSVAWAAIRARCHCVNKKWLGGMLTNWSITEMRLHKLRD---LIIEKNMGRLSHFKKR 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ L+ L GI+ M LP+++ ++D E LA+QE L IP + ++DTN + Sbjct: 118 DAALVKRQLSHLQTYLGGIKYMTELPNIVIIIDQQEEFLALQECITLGIPTICLIDTNGD 177 Query: 194 PDLVDYVIP 202 PDL D +P Sbjct: 178 PDLADIFVP 186 >gi|213021694|ref|ZP_03336141.1| hypothetical protein Salmonelentericaenterica_02677 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 163 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 75/146 (51%), Positives = 106/146 (72%), Gaps = 5/146 (3%) Query: 85 AAKRSAQYC----VNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIE 139 + +RSA C VN +WLGGM+TNWKTV QSI++L+DLE + + + TKKE L Sbjct: 1 SGERSANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRT 60 Query: 140 RKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDY 199 R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VDTNS+PD VD+ Sbjct: 61 RELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDF 120 Query: 200 VIPGNDDSSRSIALFCDLVASAAIDG 225 VIPGNDD+ R+++L+ VA+ +G Sbjct: 121 VIPGNDDAIRAVSLYLGAVAATVREG 146 >gi|195928707|gb|ACG56033.1| ribosomal protein subunit 2 [Agalinis divaricata] Length = 220 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 9/220 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+ V GH WNPKM YI +R HI +L++T L +A ++ D G Sbjct: 4 LEEMLEARVHLGHGTRKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAARGGK 63 Query: 68 RILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 + L V TK + A+D V AA ++ +CVN KWLGGM+TNW +QK R+L K Sbjct: 64 QFLIVGTKKKNMATDLVAWAALKARCHCVNKKWLGGMLTNWSITETRLQKFRNLRM---K 120 Query: 126 ENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + G K++ ++R+ +L+ L GI+ M GLPD++ +VD ++E A++E L Sbjct: 121 QKTGRLNRLPKRDAAVVKRQLSRLQTYLGGIQYMTGLPDIVIIVDQHKEYRALRECITLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP + ++DTN +PDL D IP NDD SI L + + A Sbjct: 181 IPTICLIDTNCDPDLADIPIPANDDGIFSIRLILNKLVFA 220 >gi|195928709|gb|ACG56034.1| ribosomal protein subunit 2 [Agalinis divaricata] Length = 218 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 122/215 (56%), Gaps = 9/215 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + ++LE+ V GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 2 INLEEMLEARVHLGHGTRKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAARG 61 Query: 66 GGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G + L V TK + A+D V AA ++ +CVN KWLGGM+TNW +QK R+L Sbjct: 62 GKQFLIVGTKKKNMATDLVAWAALKARCHCVNKKWLGGMLTNWSITETRLQKFRNLRM-- 119 Query: 124 NKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K+ G K++ ++R+ +L+ L GI+ M GLPD++ +VD ++E A++E Sbjct: 120 -KQKTGRLNRLPKRDAAVVKRQLSRLQTYLGGIQYMTGLPDIVIIVDQHKEYRALRECIT 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 L IP + ++DTN +PDL D IP NDD SI L Sbjct: 179 LGIPTICLIDTNCDPDLADIPIPANDDGIFSIRLI 213 >gi|41058635|gb|AAR99304.1| ribosomal protein subunit B [Candidatus Blochmannia festinatus] Length = 172 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 77/172 (44%), Positives = 109/172 (63%), Gaps = 1/172 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF +N HIIDL +T+ M KAL + G+ILFV TK A Sbjct: 1 HQTRYWNPKMKPFIFGVQNKIHIIDLDKTILMFNKALVELKKITTLKGKILFVGTKRAAR 60 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNI 138 + + A Q+ VN +WLGGM+TNWKTV QSI++L++LE + + Q TKKE L + Sbjct: 61 ESIKSTALICGQFFVNHRWLGGMLTNWKTVRQSIKRLKELENQSQDGTFQKLTKKEVLIL 120 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 + + L+ +L GI++MGGLPD +F V E +AI+EA L IP+ ++VDT Sbjct: 121 KHELRGLENSLGGIKNMGGLPDAIFTVGAIHEHIAIKEANSLGIPVFSIVDT 172 >gi|156618815|ref|YP_001430097.1| ribosomal protein S2 [Cuscuta reflexa] gi|156556000|emb|CAM98383.1| ribosomal protein S2 [Cuscuta reflexa] Length = 236 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 131/229 (57%), Gaps = 8/229 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M +I +R HI ++++T L +A ++ D RG Sbjct: 10 LEEMMGAGVHFGHGTRKWNPQMAPFIAAKRKGIHITNITRTARFLSEACDLVFDAARRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V T ++A+D V A++++ + VN KWL GM+TNW + K RDL + ++ Sbjct: 70 KFLIVGTNNKAADSVARASRKARCHYVNKKWLAGMLTNWSITETRLNKFRDLR--MEQKK 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 128 GGLNHLLKRDATMFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DTN +P+L D IP NDD+ SI + + A +G + SY+ Sbjct: 188 ICLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEG---RFSYL 233 >gi|165910481|gb|ABY73995.1| ribosomal protein S2 [Cuscuta lupuliformis] Length = 202 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 5/204 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +GV FGH WNP+M +I +R HI +L++T L +A ++ D RG L Sbjct: 1 MMGAGVHFGHGTRKWNPQMVPFIAAKRKGIHITNLTRTARFLSEACDLVFDAARRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 V T ++A+D V A++++ + VN KWL GM+TNW T+ + K RDL + ++ G Sbjct: 61 IVGTSNKAADSVARASRKARCHYVNKKWLAGMLTNWSTIETRLNKFRDLR--MEQKKGGL 118 Query: 130 --FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP + + Sbjct: 119 NHLSKRDATLFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPTICL 178 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSI 211 +DTN P+L D IP NDD+ SI Sbjct: 179 IDTNCEPNLSDISIPANDDAISSI 202 >gi|89243572|gb|ABD64905.1| ribosomal protein subunit 2 [Boschniakia himalaica] Length = 187 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 77/188 (40%), Positives = 111/188 (59%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI + HI +L++T L +A +I D +RG + L V TK++ Sbjct: 1 FGHGTRKWNPKMAPYISAKHKGIHITNLTRTARFLSEACNLIFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A+D V AA R+ +CVN KWLGGM+TNW T + K RDL E+ + N+ K++ Sbjct: 61 AADSVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNR-LPKRDV 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN +PD Sbjct: 120 AVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADISIPA 187 >gi|197131514|gb|ACH47275.1| ribosomal protein S2 [Geranium carolinianum] Length = 241 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 128/221 (57%), Gaps = 3/221 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +LL +GV GH WNP+M YI + HI +L++T L +A ++ +R Sbjct: 10 LEELLAAGVHLGHVIKKWNPRMAPYILISPKHKGNHITNLTRTARFLAEACDLVFYAASR 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G R+L V TK +A++ V+ AA ++ + VN KWLGGM+TNW T ++KLRDL E Sbjct: 70 GKRLLIVGTKKEAANYVVRAAIKARCHYVNKKWLGGMLTNWPTTETRLRKLRDLRTEQKT 129 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + K++ ++R+ L++ G++ M GLPD++ +VD + A++E L IP Sbjct: 130 GRLRLLPKRDAAILKRQLSHLQKYFRGMQYMTGLPDIVIIVDQHDGFTALRECITLGIPT 189 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT+ +PDLVD IP NDDS RSI + + A +G Sbjct: 190 IGLIDTDCDPDLVDLPIPANDDSRRSIRFILNKLVFAICEG 230 >gi|89243576|gb|ABD64907.1| ribosomal protein subunit 2 [Orobanche chilensis] Length = 187 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI+ +R HI +L++T L +A ++ +RG + L V TK++ Sbjct: 1 FGHGTRKWNPKMAPYIYAKRKGIHITNLTRTARFLFEACNLVFGAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A++ V EAA ++ +CVN KWLGGM+TNW T + K RDL E+ + N K+ Sbjct: 61 AANSVAEAAIKARCHCVNKKWLGGMLTNWSTTETRLYKFRDLRMEQKAGRLNL-LPKRYA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L IP + ++DTN +PD Sbjct: 120 AVVKRQLYRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADISIPA 187 >gi|197131516|gb|ACH47276.1| ribosomal protein S2 [Geranium macrorrhizum] Length = 245 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 125/222 (56%), Gaps = 9/222 (4%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +LL +GV FGHR WNP+M YI + THI +L++T L +A ++ + G Sbjct: 12 ELLAAGVHFGHRIKKWNPRMAPYILISPKSKGTHITNLTRTAHFLAEACHLVFYAASTGK 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L + TK A++ V+ AA ++ + VN KWL GM+TNW T ++K RDL + Sbjct: 72 SFLIIGTKKAAANYVVRAAIKARCHYVNKKWLAGMLTNWATTETRLRKFRDLRA---AQK 128 Query: 128 QG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G K++ ++R+ L++ L G++ M GLPD++ +V + E A++E L IP Sbjct: 129 TGRLSRLPKRDAAILKRQLAHLQKYLGGVQYMTGLPDIVIIVGQHHEFTALRECITLGIP 188 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT+ +PDLVD IP NDDS RSI + + A +G Sbjct: 189 TIGLIDTDCDPDLVDLPIPANDDSRRSIRFILNKLVLAICEG 230 >gi|2734655|gb|AAB93680.1| ribosomal protein subunit 2 [Conopholis americana] Length = 200 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 3/201 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R H +L++T L +A ++ D + G + L V T Sbjct: 1 GVPFGHGTRKWNPKMAPYILAKRKGIHFSNLTRTARFLSEACDLVFDAASMGKQFLIVDT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K +A+D V AA ++ +CVN KWL GM+TNW T + K RDL E+ + N+ K Sbjct: 61 KKKAADSVEWAAIKARCHCVNKKWLCGMLTNWSTTETLLNKFRDLRMEQKTGRLNR-LKK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 K+ ++R+ +L+ L GI+ M LPD++ +VD + + A++E L IP + ++DTN Sbjct: 120 KDGAVVKRQLARLQAYLYGIKYMTRLPDIVIIVDQHEDYKALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIAL 213 +PDL D IP NDD+ SI L Sbjct: 180 DPDLADISIPANDDAISSIRL 200 >gi|83745293|gb|ABC42358.1| ribosomal protein subunit 2 [Boschniakia hookeri] Length = 187 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WN KM YI +R HI +L++T L +A ++ D +RG + L V TK++ Sbjct: 1 FGHVTRKWNTKMAPYISAKRKGIHITNLTRTARFLSEACGLVFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A+D V AA ++ +CVN KWLGGM+TNW T + KLRDL E+ + N+ K++ Sbjct: 61 AADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRDLRMEQKTGRLNR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AMVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADISIPA 187 >gi|224179493|ref|YP_002601019.1| ribosomal protein S2 [Monomastix sp. OKE-1] gi|217314536|gb|ACK36879.1| ribosomal protein S2 [Monomastix sp. OKE-1] Length = 270 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 48/262 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I +LLE+GV FGHR WNPKM YIF ERN HIID+ QT+ L+++ +S +G Sbjct: 4 IEELLEAGVHFGHRVNKWNPKMAPYIFGERNGVHIIDIIQTLGYLEESYLFLSKYTVKGA 63 Query: 68 -------------------RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT 108 ++LFV TK Q + V A+ S VN +WLGG++TNW T Sbjct: 64 LRNSSSPSNPKTFGEGIGQKVLFVGTKKQVASIVQAEAENSHANYVNHRWLGGLLTNWST 123 Query: 109 VSQSIQKLRDLEELLNKENQGF-------------TKKERLNIERKRDKLKRALDGIRDM 155 + I KL+ L EN TKKE+ ++++ +KLK+ GI +M Sbjct: 124 IKLCIAKLKTLRASGLFENTEISSVNNSTKTSLVTTKKEKALLKKQYEKLKKFFSGIENM 183 Query: 156 GGLPDLMFVVDTNREKLAIQEARRL---------------RIP-IVAVVDTNSNPDLVDY 199 +PD++ +V + E A++E ++L +P + ++DTN +P L D Sbjct: 184 SDIPDIVIIVGQDCEMNAVKECQKLASSWRSDTNSTKGGNALPRTITILDTNCDPSLADL 243 Query: 200 VIPGNDDSSRSIALFCDLVASA 221 IP NDDS++S+ L + A Sbjct: 244 FIPANDDSTKSVELILKKLGEA 265 >gi|307069551|ref|YP_003878028.1| 30S ribosomal subunit protein S2 [Candidatus Zinderia insecticola CARI] gi|306482811|gb|ADM89682.1| 30S ribosomal subunit protein S2 [Candidatus Zinderia insecticola CARI] Length = 241 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 TI ++++S + GH+ NPKM +YI +N HIID+ +T+ + +KAL+ IS A Sbjct: 2 LTINKIIKSKIHLGHKKCFLNPKMSKYIIGCKNKIHIIDIKKTIILYKKALEYISILSAN 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 IL V TK D + AKR +N +WLGG TN++ ++ SI+K +++ + K Sbjct: 62 NRTILLVCTKKNTRDIIKSEAKRGGLPYINQRWLGGTFTNYEIINNSIKKFKNMIKK--K 119 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K N +K KLK+ + G++ M LPD +FV+DT K I+EA+ L+IPI+ Sbjct: 120 KKIKLNTKGTSNFIKKFKKLKKFIGGMKMMNNLPDAIFVIDTEFHKNVIKEAKILKIPII 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 A+VDTN+NP+ +DY+IPGN+DS SI L+ Sbjct: 180 AIVDTNNNPENIDYIIPGNNDSIISIKLY 208 >gi|6650140|gb|AAF21738.1|AF055150_1 ribosomal protein subunit 2 [Schwalbea americana] Length = 202 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 3/199 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHLGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFHAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 +A+ V AA ++ +CVN KW GGM+TNW + ++K RDL E+ + N+ K Sbjct: 61 TKKAAGSVAWAAIKARCHCVNQKWFGGMLTNWSNTERRLRKFRDLRMEQKTGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 K+ + R+ +L+ L GI+ M G+PD++ +VD E A++E IP + ++DTN Sbjct: 120 KDAAVVTRQLSRLQTYLGGIKYMPGVPDIVIIVDRYEEYTALRECITFGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSI 211 +PDL D IP NDD+ SI Sbjct: 180 DPDLADLPIPANDDAISSI 198 >gi|290487176|gb|ADD29972.1| ribosomal protein S2 [Plumbago auriculata] Length = 236 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV GH WNP+M YI +R HI +L++T L +A ++ D ++ Sbjct: 10 LEEMMEAGVHLGHVAKKWNPRMSPYISTKRKGIHITNLTRTARFLSEACDLVFDAASKRK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 L V TK +A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 70 HFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+ L GI+ M LPD++ +V E A++E L IP + Sbjct: 130 LACLPKRDAAVLKRQLFHLQTYLGGIKYMTRLPDIVIIVHQQEEYKALRECITLGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ S+ L + A +G Sbjct: 190 LIDTNCDPDLADLSIPANDDARTSVRLILSKLVFAICEG 228 >gi|153805630|ref|YP_001382215.1| ribosomal protein S2 [Leptosira terrestris] gi|209573609|sp|A6YGD8|RR2_LEPTE RecName: Full=30S ribosomal protein S2, chloroplastic gi|134270161|gb|ABO69350.1| ribosomal protein S2 [Leptosira terrestris] Length = 265 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 130/220 (59%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+ + E+G+ G WNPKM YI E H+I+L QT+ L++ + +G Sbjct: 37 IKSMFEAGLHRGDLTQNWNPKMAPYIRGEFKGKHVINLVQTLLYLEEVCAFLEKEALKGK 96 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + LFV T++ +S V + A R+ + VN KWLGGM+TNWKT + +++L L +L K Sbjct: 97 KFLFVGTQTHSSVVVKKTAIRTNSFFVNEKWLGGMLTNWKTAKRLVRRLNFL-LMLEKTT 155 Query: 128 --QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q +KKER + +++++KLK+ G+R M LP ++ + N+E A++E +RL+IP V Sbjct: 156 YIQKLSKKERNDFKKEKNKLKKYFLGLRSMQKLPGVVILASQNQEMNALKECQRLKIPSV 215 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTNS+P L DY IPGNDDS +S+ A G Sbjct: 216 TILDTNSDPTLSDYFIPGNDDSYKSLNFLFKFFRLAIKKG 255 >gi|290487152|gb|ADD29960.1| ribosomal protein S2 [Phoradendron serotinum] Length = 236 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 3/223 (1%) Query: 8 IRQLLESGVQFGHRNFL-WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 + ++E+G+ GH WNP+ME YI +R HI +L+ + L +A ++ D +RG Sbjct: 10 LEDMMEAGIHLGHSTRRKWNPRMEPYISGKRKGIHITNLTISARFLSEACDLVFDAASRG 69 Query: 67 GRILFVATKSQ-ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++L V TK++ +D V A R+ + VN KWLGGM+TNW T + K RDL L Sbjct: 70 KQLLMVGTKNKKVADSVAWVAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTELRI 129 Query: 126 ENQGFT-KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 F K++ ++R+ ++L+ L GI+ M LPD++ ++D E A++E L IP Sbjct: 130 GKLNFIPKRDAAMLKRQFNQLQTYLGGIQYMTELPDIVIIIDQQEEYTALRECMALGIPT 189 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +DTNS+PDL D IP NDD+ SI + A + G+A Sbjct: 190 ICFIDTNSDPDLADISIPANDDAIASIRFVLNKFLFAIMKGLA 232 >gi|2734683|gb|AAB93693.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 204 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVHLGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K + ++ V AAK++ +CVN KWLGG +TNW T + + RDL E+ + + + K Sbjct: 61 KKKTANSVACAAKKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP N++S SI L Sbjct: 180 DPDLADLPIPANNNSIFSIRLI 201 >gi|159161242|ref|YP_001542520.1| ribosomal protein S2 [Cuscuta exaltata] gi|209573598|sp|A8W3B3|RR2_CUSEX RecName: Full=Plastid 30S ribosomal protein S2 gi|158938667|gb|ABW83684.1| ribosomal protein S2 [Cuscuta exaltata] Length = 236 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 131/229 (57%), Gaps = 8/229 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP++ +I +R HI +L++T L +A ++ D RG Sbjct: 10 LEEMMGAGVHFGHGTRKWNPQIAPFISAKRKGIHITNLTRTARFLSEACDLVFDAARRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V T ++A+ V A++++ + VN KWL GM+TNW T + K RDL + ++ Sbjct: 70 KFLIVGTNNKAAYSVARASRKARCHYVNKKWLAGMLTNWSTTETRLNKFRDLR--MEQKK 127 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 128 GGLNHLPKRDATMFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DTN +P+L D IP NDD+ SI + + A +G + SY+ Sbjct: 188 ICLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEG---RFSYL 233 >gi|6650132|gb|AAF21734.1|AF055146_1 ribosomal protein subunit 2 [Orobanche hederae] Length = 202 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 118/202 (58%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV +GH WNPKM YI R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVHWGHDIKKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 K + ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K Sbjct: 61 KKKTANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 120 RDAAVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D IP ND+S SI L Sbjct: 180 DPDLADLSIPANDNSIFSIRLI 201 >gi|10179738|gb|AAG13861.1| ribosomal protein subunit 2 [Lamium purpureum] Length = 202 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 5/200 (2%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI + HI + ++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGXXKWNPKMAPYIXAKXKGIHITNXTKTXXFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKE 134 K +A+D V AA ++ +CVN KWLGG +TNW T + RDL + ++ + Sbjct: 61 KKKAADSVARAAIKARCHCVNKKWLGGXLTNWSTTXTXLHXFRDLX--MQQKAGXLNRXP 118 Query: 135 RLN---IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 + B ++ + +L+ L GI+ M GLPD++ +VD + A+ L IP + ++BTN Sbjct: 119 KXBAAVVKXQLYRLQTYLGGIKYMTGLPDIVIIVDQHEXYTALXXCITLGIPTICLIBTN 178 Query: 192 SNPDLVDYVIPGNDDSSRSI 211 NPBL B IP NDD+ SI Sbjct: 179 CNPBLABISIPANDDAISSI 198 >gi|12545419|ref|NP_074969.1| ribosomal protein S2 [Euglena longa] gi|14286154|sp|P24352|RR2_ASTLO RecName: Full=Plastid 30S ribosomal protein S2 gi|12329883|emb|CAC24580.1| ribosomal protein S2 [Euglena longa] Length = 235 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 118/218 (54%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+++ + + GH + WNPKM++Y+FC++N +IIDL QTV L+K I G Sbjct: 7 IKEMFFARLHLGHFSTKWNPKMKKYVFCKQNGKYIIDLIQTVYYLKKVCNFIKKLSIEGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV+ + D + A + + + WLGG TNW T I KL K Sbjct: 67 KILFVSARMLIVDKLKHFANVTKSFYITEDWLGGTFTNWITTKGCIDKLNYYSVDGLKLY 126 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 TK+ERL +++ KL + GI+ M +PD++F++ + K AI E +L +P +++ Sbjct: 127 DSLTKRERLISRKQQSKLAKYYFGIKQMKKIPDVVFLIGQSDLKKAIGECLKLNVPTISI 186 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +DT+ +P + ++ IP NDDS SI D V + G Sbjct: 187 LDTDCDPTMTNFFIPANDDSISSIFFILDFVKYYMLKG 224 >gi|108796746|ref|YP_636476.1| ribosomal protein S2 [Zygnema circumcarinatum] gi|122239143|sp|Q32RQ0|RR2_ZYGCR RecName: Full=30S ribosomal protein S2, chloroplastic gi|61393730|gb|AAX45872.1| ribosomal protein S2 [Zygnema circumcarinatum] Length = 235 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 125/220 (56%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + Q++E+GV FGH+ WNPK+ Y+ + II ++ T +L A ++ G Sbjct: 10 LEQMMEAGVHFGHQARKWNPKIAPYLLKDTKKIRIIHITHTARLLADACDFATNAAREGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE--ELLNK 125 + + V T+ Q + V AK++ + VN+KWLGGM+TNW T+ +QK LE E+ Sbjct: 70 QFMLVGTRYQTAGLVATTAKKARCHYVNTKWLGGMLTNWSTIKTRLQKFEQLEAQEIAGA 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N KKE ++R+ +L++ GI+ M +PD++ ++ +++ AIQE +L IP + Sbjct: 130 FNH-LPKKEVAVMKRQLSQLRKYFHGIKYMKKVPDIVIFINQHQDYTAIQECIKLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDT+ +P+LVD IP NDD+ SI + +A +G Sbjct: 189 GLVDTDCDPNLVDMPIPANDDNRTSIRWILSQLTTAIKEG 228 >gi|197131524|gb|ACH47280.1| ribosomal protein S2 [Pelargonium cotyledonis] Length = 267 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 122/205 (59%), Gaps = 7/205 (3%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L + V GH WNP+M Y++ + + HI +L++T L +A ++ D ++G + L Sbjct: 13 MLAARVHLGHDIKQWNPRMAPYLYAKFKDNHITNLTRTARFLSEACDLVFDAASKGKQFL 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG- 129 V TK +A++ V AA ++ + VN KWLGGM+TNW T + + K RD L+ ++ G Sbjct: 73 IVGTKKEAANSVARAAIKAECHYVNKKWLGGMLTNWSTTQKRLCKFRD---LIRQQKTGG 129 Query: 130 ---FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ L+++L G++ M LPD++ VVD E A++E L IP + Sbjct: 130 LNRLPKRDAAILKRQLSHLQKSLGGVKYMKKLPDIVIVVDQQNEFTALRECITLGIPTIG 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DTN +PDLVD IP NDDS SI Sbjct: 190 LIDTNCDPDLVDLPIPANDDSIPSI 214 >gi|165910489|gb|ABY73999.1| ribosomal protein S2 [Dichondra carolinensis] Length = 202 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 122/206 (59%), Gaps = 9/206 (4%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++++GV FGH WNPKM YI +R +I +L +T L +A ++ +RG + L Sbjct: 1 MMKAGVHFGHGIRKWNPKMAPYISAKRKGRYITNLIRTARFLAEACDLVFYAASRGNQFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-----ELLNK 125 V TK +A+D V +A+ ++ + VN KWLGGM+TNW T + K RDL +LN+ Sbjct: 61 IVGTKKKAADSVAQASIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMQQKMGVLNR 120 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 KK+ ++R+ +L+ L GI+ M LPD++ +VD ++E A++E L IP + Sbjct: 121 ----LPKKDATMLKRQLARLQTYLGGIKYMSRLPDIVIIVDQHKEYTALRECITLGIPTI 176 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++DT+ +P+L D IP NDD+ SI Sbjct: 177 CLIDTDCDPNLADISIPANDDAIGSI 202 >gi|10179728|gb|AAG13856.1| ribosomal protein subunit 2 [Plantago major] Length = 202 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 109/196 (55%), Gaps = 7/196 (3%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI + + T L +A ++ +RG + L V T Sbjct: 1 GVHLGHEPRKWNPKMAPYISAKRKGIHITNXTXTARFLXEACDLVFGAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----F 130 K +A+D V AA R+ +CV KWLGGM+TNW T + K RDL K+ G Sbjct: 61 KKKAADLVAWAAIRARCHCVTKKWLGGMLTNWSTTETRLHKFRDLRM---KQKTGRLNRL 117 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 K + ++R+ +L+ L GI+ M GLPD++ +VD + A++E L IP + ++BT Sbjct: 118 PKXDAAMLKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEXYTALRECITLGIPTICLIBT 177 Query: 191 NSNPDLVDYVIPGNDD 206 N +PDL B IP NDD Sbjct: 178 NCDPDLABXSIPANDD 193 >gi|197131522|gb|ACH47279.1| ribosomal protein S2 [Sarcocaulon vanderietiae] Length = 235 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 132/223 (59%), Gaps = 4/223 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++LL + V GH WNP+M YI+ +R + HI +L++T L +A ++ + Sbjct: 10 LKELLAARVHLGHGIKKWNPRMAPYIYISKKRKDNHITNLTRTARFLAEACDLVFYAASS 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G + L V T+ + ++ V+ AA ++ + VN KWLGGM+TNW +++ RDL+ + Sbjct: 70 GKQFLIVDTREEVANSVVRAAIKARCHYVNKKWLGGMLTNWPITQTKLREFRDLKS--AQ 127 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G K++ ++R+ +L++ L G++ M LPD++ VVD +A++E L IP + Sbjct: 128 KTGGLRKRDAAILKRQLSQLEKYLGGVQYMTRLPDIVIVVDQQASIMALRECITLGIPTI 187 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++DTN +PDLVD IP NDDS RSI L + + A +G +R Sbjct: 188 GLIDTNCDPDLVDLPIPANDDSIRSIRLILNKLVFAICEGRSR 230 >gi|224179455|ref|YP_002600867.1| ribosomal protein S2 [Pycnococcus provasolii] gi|217314498|gb|ACK36840.1| ribosomal protein S2 [Pycnococcus provasolii] Length = 224 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ L+++G GHR WNP+M +YI+ RN HI+DL QTV L +A + +GG Sbjct: 4 LQALMKAGAFLGHRTSRWNPRMAKYIYARRNGVHILDLVQTVQCLDQARAFVKKLANQGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +LF+ T A+ +M AA RS + VN +WLGGM TNW T+ + +L L + E+ Sbjct: 64 SVLFLGTSRHAAGPIMAAAARSNSFYVNQRWLGGMFTNWSTMRLCVHRLTYLNQC--GED 121 Query: 128 QGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 FT K+E + R+ +LK+ L G+ M LP+ + V + + A+ E RR IP Sbjct: 122 GTFTTLPKREEAALRRQHARLKKYLGGLCGMEQLPNAVIVTGQSSDSHALAECRRSNIPT 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSI 211 + ++D++ +P VD VIP NDDS+ S+ Sbjct: 182 IGILDSDGDPTSVDLVIPANDDSAASL 208 >gi|304373201|ref|YP_003856410.1| 30S ribosomal protein S2 [Mycoplasma hyorhinis HUB-1] gi|304309392|gb|ADM21872.1| 30S ribosomal protein S2 [Mycoplasma hyorhinis HUB-1] Length = 334 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 81/222 (36%), Positives = 140/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+G FGH+ W+PKM+ YI +N THI+D+ +T L+ A Q+I+ Sbjct: 39 PIVSKQKLLEAGTYFGHKASQWHPKMQPYILKRPKNGTHILDVVKTQKTLEIAYQLINKL 98 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +FV TK QA V A+R+ V+ +WLGG +TN KT+ ++++++LEE Sbjct: 99 ALKGASFIFVGTKKQARKVVEAQAERTNSIYVSERWLGGTLTNKKTILSRLKQMQELEEH 158 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD---LMFVVDTNREKLAIQEARR 179 +TKKE + + +K KL++ L+GIR + + + +M V D N++ +AI+EA++ Sbjct: 159 AENNFSNYTKKEGVLMSKKLAKLQKNLNGIRGLKFINNDKLIMLVADPNKDIIAIKEAKK 218 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 ++ ++ ++D+N++P L+D+ IP NDDS +SI L ++A A Sbjct: 219 AKVKVIGIMDSNTDPSLLDFGIPANDDSVKSITLIFTVLADA 260 >gi|2734691|gb|AAB93697.1| ribosomal protein subunit 2 [Striga asiatica] Length = 202 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 3/202 (1%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L +T L +A ++ +R + L V T Sbjct: 1 GVHFGHILRKWNPKMAPYISGKRKGNHITNLIRTARFLSEACNLVFYAASRRKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTK 132 + + +D V AAK++ + VN KWL GM+TNW T + KLRDL E+ + + N+ K Sbjct: 61 QKKEADSVAWAAKKARCHFVNKKWLRGMLTNWSTTETRLHKLRDLRIEQRVGRLNR-LPK 119 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+ L GI+ M LPD++ ++D + E A++E L IP + ++DTN Sbjct: 120 RDAAVVKRQLSRLQTYLGGIKYMTRLPDVVIILDQHEEYTALRECITLGIPTICLIDTNC 179 Query: 193 NPDLVDYVIPGNDDSSRSIALF 214 +PDL D+ IP NDDS SI L Sbjct: 180 DPDLADFSIPANDDSRSSIRLI 201 >gi|11467017|ref|NP_041924.1| ribosomal protein S2 [Euglena gracilis] gi|266973|sp|P30389|RR2_EUGGR RecName: Full=30S ribosomal protein S2, chloroplastic gi|14378|emb|CAA77928.1| ribosomal protein S2 [Euglena gracilis] gi|415767|emb|CAA50111.1| 30S ribosomal protein S2 [Euglena gracilis] Length = 240 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/221 (38%), Positives = 132/221 (59%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ ++L S V GH+ WNP+M YI+ ER HIIDL QT+ L+KA + +V + Sbjct: 2 ITVEKMLNSSVHLGHKVKQWNPRMRIYIYGERKGLHIIDLLQTIVCLKKACNFLIRSVRK 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G R LFV TK S + A + + V +WLGG++TNW T+ I KL+ L + K Sbjct: 62 GKRALFVCTKRFFSILTQKIALKCNSFFVTKRWLGGILTNWITIKNCINKLKQLSKQKEK 121 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKERL +++K+ KLK+ G+RDM P+++ ++ N+E A++E ++L I + Sbjct: 122 HHNLLTKKERLVLKKKKLKLKKYFSGMRDMTERPEIVIIIGQNKEINAVRECKKLGIASI 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++DTN +P L Y IP NDDS S++L ++ ++ G+ Sbjct: 182 TILDTNCDPTLTKYPIPSNDDSILSVSLILSVLCNSINRGV 222 >gi|326200270|gb|ADZ52309.1| ribosomal protein S2 [Asclepias syriaca] Length = 236 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV GH WNPKM YIF R HI +L +T L + ++ D +RG Sbjct: 10 LEEMMEAGVHLGHGTKKWNPKMRPYIFARRKGIHITNLIRTARFLSETCDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V T ++A+ V AA ++ + VN KWLGGM+TNW T + + RDL E+ + Sbjct: 70 QFLIVGTNNKAAASVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKTGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M LPD++ +VD + + A++E L IP + Sbjct: 130 LNR-LPKRDAAVLKRQLSRLQTYLGGIKYMTELPDIVIIVDQHEDYTALRECITLGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 CLIDTNCDPDLADLSIPANDDAISSIRLILNKLVFAICEG 228 >gi|83745361|gb|ABC42392.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 114/189 (60%), Gaps = 5/189 (2%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN---QGFTKKE 134 + V +AAK++ + VN+KW GGM+TNW +QK +DL ++ +E +KK+ Sbjct: 61 TVNLVEQAAKKAGCHFVNTKWTGGMLTNWSITKARLQKFKDL--IIEQEAGRIDCLSKKD 118 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ ++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+P Sbjct: 119 AAVVKRQLSHFQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDP 178 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 179 DLADISIPA 187 >gi|330723939|gb|AEC46309.1| 30S ribosomal protein S2 [Mycoplasma hyorhinis MCLD] Length = 334 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 81/222 (36%), Positives = 140/222 (63%), Gaps = 4/222 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+G FGH+ W+PKM+ YI +N THI+D+ +T L+ A Q+I+ Sbjct: 39 PIVSKQKLLEAGTYFGHKASQWHPKMQPYILKRPKNGTHILDVVKTQKTLEIAYQLINKL 98 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +FV TK QA V A+R+ V+ +WLGG +TN KT+ ++++++LEE Sbjct: 99 ALKGASFIFVGTKKQARKVVEAQAERTNSIYVSERWLGGTLTNKKTILSRLKQMQELEEH 158 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD---LMFVVDTNREKLAIQEARR 179 +TKKE + + +K KL++ L+GIR + + + +M V D N++ +AI+EA++ Sbjct: 159 AENNFSNYTKKEGVLMSKKLAKLQKNLNGIRGLKFINNDKLIMLVADPNKDIIAIKEAKK 218 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 ++ ++ ++D+N++P L+D+ IP NDDS +SI L ++A A Sbjct: 219 AKVKVIGIMDSNTDPALLDFGIPANDDSVKSITLIFTVLADA 260 >gi|11466956|ref|NP_054377.1| ribosomal protein S2 [Epifagus virginiana] gi|133909|sp|P27068|RR2_EPIVI RecName: Full=Plastid 30S ribosomal protein S2 gi|11549|emb|CAA43901.1| ribosomal protein S2 [Epifagus virginiana] gi|336925|gb|AAA65851.1| ribosomal protein S2 [Epifagus virginiana] Length = 237 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 127/220 (57%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNPKM YI + H +L++T L +A ++ +RG Sbjct: 10 LEEMIGAGVSFGHGTRKWNPKMAPYISVKHKGIHFTNLTKTARFLSEACDLVFYAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D AA ++ +CVN KW GGM+TNW T + KLRDL E+ + Sbjct: 70 QFLIVDTKNKAADSAAWAAIKARCHCVNKKWPGGMLTNWSTTETRLHKLRDLIMEQKAGR 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ KK+ ++R+ +L+ L GI+ M LPD++ +VD + E A+ E + IP + Sbjct: 130 LNR-LKKKDEAAVKRQLARLQTYLGGIKYMTRLPDIVIIVDQHEEYKALHECITIGIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 189 GLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEG 228 >gi|83745359|gb|ABC42391.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 114/189 (60%), Gaps = 5/189 (2%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V+TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVSTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN---QGFTKKE 134 + V +AAK++ + VN KW GGM+TNW +QK +DL ++ +E +KK+ Sbjct: 61 TVNLVEQAAKKAGCHFVNKKWTGGMLTNWSITKARLQKFKDL--IIEQEAGRIDCLSKKD 118 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ ++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+P Sbjct: 119 AAVVKRQLSHFQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDP 178 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 179 DLADISIPA 187 >gi|323444987|gb|EGB01841.1| hypothetical protein AURANDRAFT_35694 [Aureococcus anophagefferens] Length = 175 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 106/174 (60%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + I QLL++GV FGH+ WNPKM YI+ ERN HI+DL QT +LQ+A + Sbjct: 1 MAEIKIAQLLKAGVHFGHKTPRWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDFVQLA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA++ + E A R+ + +N +W GG++TNW+TV IQ L LE Sbjct: 61 AEQGKTFLFVGTKPQAAELIKEEALRADSFYINHRWYGGLLTNWQTVKGRIQTLHTLEAQ 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 KKE ++ ++ KL+ L+G+++M G+PD+M V+D N E A+++ Sbjct: 121 EETIFPTLPKKESASLRKELTKLRSQLNGVKNMSGVPDIMIVIDQNYELTAVRK 174 >gi|222446763|gb|ACM51420.1| ribosomal protein S2 [Caulerpa filiformis] Length = 238 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 128/218 (58%), Gaps = 11/218 (5%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++ ++GV GHR NPKM YI+ E+++ IIDL QT L+ A ++ D +RG Sbjct: 7 LQEMFDAGVHLGHRRRQGNPKMLPYIYKEKDDFQIIDLLQTYWYLKIACKLSFDRCSRGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV T + + A + +N +WLGG +TNW T+ +SI K+ ++N Sbjct: 67 RVLFVGTNRHIGKSIEQRANNCNCWYINKRWLGGFLTNWITMEKSILKM--------EQN 118 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 Q E ++R++ +L++ L G++ M LPD++ +V +E A++E ++L+IP + + Sbjct: 119 QLI---ESTRLKRQKVRLEKYLGGVKTMKKLPDIVIIVGQQKEINAVRECQKLKIPSITI 175 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VDTN +P L D +IPGNDDS S+ + + A +G Sbjct: 176 VDTNCDPSLTDLLIPGNDDSLSSVNFILNKLEEAIREG 213 >gi|83745305|gb|ABC42364.1| ribosomal protein subunit 2 [Orobanche cernua var. desertorum] Length = 187 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V TK Q Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A++ V AA ++ +CVN KWLGG +TNW T + + RDL E+ + + + K+++ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKR-CPKRDK 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN +PD Sbjct: 120 AVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 + D IP Sbjct: 180 IADLSIPA 187 >gi|83745363|gb|ABC42393.1| ribosomal protein subunit 2 [Phelipanche arenaria] gi|83745365|gb|ABC42394.1| ribosomal protein subunit 2 [Phelipanche arenaria] gi|83745367|gb|ABC42395.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 5/189 (2%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN---QGFTKKE 134 + V +AAK++ + VN KW GGM+TNW +QK +DL ++ +E +KK+ Sbjct: 61 TVNLVEQAAKKAGCHFVNKKWTGGMLTNWSITKARLQKFKDL--IIEQEAGRIDCLSKKD 118 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ ++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+P Sbjct: 119 AAVVKRQLSHFQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDP 178 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 179 DLADISIPA 187 >gi|83745295|gb|ABC42359.1| ribosomal protein subunit 2 [Orobanche latisquama] gi|83745297|gb|ABC42360.1| ribosomal protein subunit 2 [Orobanche latisquama] Length = 188 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 114/188 (60%), Gaps = 2/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L++T L +A ++ D+ +RG + L V TK++ Sbjct: 1 FGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLCEACDLVFDSASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A+D V AA+++ + VN KWLGGM+TNW T + K RDL E+ K TK++ Sbjct: 61 AADLVALAARKARCHFVNKKWLGGMLTNWSTTKIRLHKFRDLRIEKKKIKLINHLTKRDV 120 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ + + L GI+ M GLPD++ ++D ++E +A++E L IP + ++DTN +PD Sbjct: 121 AVAKRQLFRFQTYLGGIKYMTGLPDIVIIIDQHQEYMALRECITLGIPTICLIDTNCDPD 180 Query: 196 LVDYVIPG 203 L D IP Sbjct: 181 LADISIPA 188 >gi|83745357|gb|ABC42390.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 5/189 (2%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN---QGFTKKE 134 + V +A K++ + VN KW GGM+TNW +QK +DL ++ +E +KK+ Sbjct: 61 TVNLVEQATKKAGCHFVNKKWTGGMLTNWSITKARLQKFKDL--IIEQEAGRIDCLSKKD 118 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ L++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+P Sbjct: 119 AAVVKRQLSHLQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDP 178 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 179 DLADISIPA 187 >gi|220983461|dbj|BAH11230.1| ribosomal protein S2 [Welwitschia mirabilis] Length = 323 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 129/254 (50%), Gaps = 39/254 (15%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE------------------------------- 36 + +++ V G++ WNPKM YI E Sbjct: 64 FKNMIKEAVHLGNKKNEWNPKMASYILTEYKMTERKNLPVHLGNKKNKWSLDRASYSLYR 123 Query: 37 RNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNS 96 R N HII+L QT L + ++ + IL V T+ +D V AAK++ + VN Sbjct: 124 RKNRHIINLVQTAHFLSETCNLLFKAARKRKEILIVGTRRYIADLVASAAKKAQCHYVNY 183 Query: 97 KWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF-----TKKERLNIERKRDKLKRALDG 151 KW GG++TNW T + +++ R+L++ K + G TKKE IE++ + L + L G Sbjct: 184 KWQGGLLTNWSTTKERLKRFRNLKQ---KYDSGLFHRRRTKKEIALIEKQLELLYQYLKG 240 Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I M LPD++ +VD +E A++E R LRIP +++VDTN +PDLVD IP NDD+ S+ Sbjct: 241 ILYMKKLPDIVIIVDQQKESTAVRECRALRIPTISLVDTNCDPDLVDIPIPANDDAPGSV 300 Query: 212 ALFCDLVASAAIDG 225 L + + SA G Sbjct: 301 RLILNRLMSAVSAG 314 >gi|165910477|gb|ABY73993.1| ribosomal protein S2 [Cuscuta europaea] Length = 191 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 116/190 (61%), Gaps = 5/190 (2%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM +IF +R + HII+L T L +A ++ D RG L V T ++A++ V Sbjct: 4 WNPKMAPFIFTKRKDIHIINLIVTARFLSEACDLVFDAANRGKNFLIVGTNNKAANLVAR 63 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERK 141 A+ ++ + VN KWL GM+TNW T +QK RDL + ++ GF K++ ++R+ Sbjct: 64 ASIKARCHYVNKKWLAGMLTNWSTTETRLQKFRDLR--MEQKKGGFHHLPKRDATVLKRQ 121 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVI 201 + ++ L GI+ M GLPD++ ++D ++E +A++E L IP + ++DTN +P+L D I Sbjct: 122 LARFQKYLGGIQYMTGLPDIVIIIDQHKEYIALRECITLGIPTICLIDTNCDPNLSDISI 181 Query: 202 PGNDDSSRSI 211 P NDD+ SI Sbjct: 182 PANDDAISSI 191 >gi|159901960|gb|ABX10691.1| 30S ribosomal protein S2 [uncultured planctomycete 8FN] Length = 228 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 125/200 (62%), Gaps = 5/200 (2%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI+ +N HIID+ +TV L +A + ++ + G ILFV TK QA + A R Sbjct: 1 MSPYIYGRKNAVHIIDIRETVRGLLRAKKYLAQVASGGSLILFVGTKRQAGSIIEREASR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG---FTKKERLNIERKRDKL 145 + V+ +WLGG +TN++T+ + +L +LE++ +E+ G ++KK + + R+ K+ Sbjct: 61 AGMPFVSERWLGGALTNFRTIRSRMSRLEELEKI--RESDGLAQYSKKMQSALNREYRKM 118 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGND 205 R L+G+R+M +P+ + +VD N+EK +++EA+ L I VA++DT+ +P+LVD IPGND Sbjct: 119 YRNLNGLRNMNRMPECLVIVDPNKEKNSLREAKALGISTVALIDTDCDPELVDLPIPGND 178 Query: 206 DSSRSIALFCDLVASAAIDG 225 D RSI L +A A I G Sbjct: 179 DGIRSIDLIVKNLADAVIAG 198 >gi|284931302|gb|ADC31240.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. F] Length = 323 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 133/227 (58%), Gaps = 18/227 (7%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERN-----------NTHIIDLSQTVPMLQKA 55 T +LL+ G G WNPKM+ YI RN N+ +++L L +A Sbjct: 43 THTKLLDVGAFNGVAKRKWNPKMKHYI-IPRNAAQFSAQFDLINSDLLNLK-----LHEA 96 Query: 56 LQVISDTVARGGRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 +++ ILFV TKS+A + + A+R+ + +N +WLGG +TN+KT+S SI Sbjct: 97 FNYLTEAAKAKKNILFVGTKSKAVQELIQSIAERTNSFYINQRWLGGTLTNFKTISNSIN 156 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 +L+ L + + +TKKE++ I +K KL+R GI+DM GLP ++ + D +EK A+ Sbjct: 157 QLKRLIHTRDNDLTKYTKKEQIMIMKKLAKLERFFGGIKDMQGLPHVLVIDDPIKEKNAV 216 Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 EAR+LRIP++A+ +TNS+P+++ IP N+ + RS+ L +L+ A Sbjct: 217 TEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGDA 263 >gi|2734697|gb|AAB93700.1| ribosomal protein subunit 2 [Striga gesnerioides] Length = 204 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 1/200 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 G FGH WNPKM YI +R HI +L +T L +A ++ +R + L V T Sbjct: 1 GFHFGHNIRKWNPKMAPYISGKRKGNHITNLIRTARFLSEACNLVFYAASRRKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 + + +D V AA ++ + VN KWLGGM+TNW T + KLRDL+ E K+ Sbjct: 61 QKKEADSVARAAIKARCHFVNKKWLGGMLTNWSTTETRLHKLRDLKIEQRAGRLSRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M LPD++ ++D ++E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTRLPDVVIILDQHKEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIAL 213 PDL D+ IP NDDS +I L Sbjct: 181 PDLADFSIPANDDSRSAIRL 200 >gi|11466554|ref|NP_044803.1| ribosomal protein S2 [Reclinomonas americana] gi|2258384|gb|AAD11918.1| ribosomal protein S2 [Reclinomonas americana] Length = 212 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 22/215 (10%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L +GV GH WN + Y+ +R N HIIDL +T+ +L+K L +S+ +RGG IL Sbjct: 14 MLRNGVHIGHHVNKWNSETGPYLLGQRGNIHIIDLEKTLFLLRKTLSFVSELSSRGGSIL 73 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 F++T S+ V E AK+ Q VN +W+GG++TN+ + + ++ + E Sbjct: 74 FISTMYDFSNIVEENAKKCGQPYVNRRWIGGLLTNFTHIKKKLRNPKGCSE--------- 124 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 K + GIR+M LP +F+V N + A+ EA +L IP +A+VD+ Sbjct: 125 -------------KFIFSTQGIRNMERLPSAIFIVGVNNCRTALLEASKLNIPTIAIVDS 171 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 N++ + Y IPGNDDS ++ L+C L+++A + G Sbjct: 172 NTSIQDITYPIPGNDDSILAVNLYCQLISNAILSG 206 >gi|31544727|ref|NP_853305.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. R(low)] gi|81707854|sp|Q7NAW2|RS2_MYCGA RecName: Full=30S ribosomal protein S2 gi|31541573|gb|AAP56873.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. R(low)] gi|284930794|gb|ADC30733.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. R(high)] Length = 323 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 133/227 (58%), Gaps = 18/227 (7%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERN-----------NTHIIDLSQTVPMLQKA 55 T +LL+ G G WNPKM+ YI RN N+ +++L L +A Sbjct: 43 THTKLLDVGAFNGVAKRKWNPKMKHYI-IPRNAAQFSAQFDLINSDLLNLK-----LHEA 96 Query: 56 LQVISDTVARGGRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 +++ ILFV TKS+A + + A+R+ + +N +WLGG +TN+KT+S SI Sbjct: 97 FNYLTEAAKAKKNILFVGTKSKAVQELIQSIAERTNSFYINQRWLGGTLTNFKTISNSIN 156 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 +L+ L + + +TKKE++ I +K KL+R GI+DM GLP ++ + D +EK A+ Sbjct: 157 QLKRLIHTRDNDLTKYTKKEQIMIMKKLAKLERFFGGIKDMQGLPHVLVIDDPIKEKNAV 216 Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 EAR+LRIP++A+ +TNS+P+++ IP N+ + RS+ L +L+ A Sbjct: 217 TEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGDA 263 >gi|323148819|ref|YP_004221912.1| ribosomal protein S2 [Erodium carvifolium] gi|316926283|gb|ADU58136.1| ribosomal protein S2 [Erodium carvifolium] Length = 241 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 124/221 (56%), Gaps = 3/221 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +L+ +GV GH WNP+M ++F + HI +L++T L +A ++ +R Sbjct: 10 LEELVAAGVHLGHGIKKWNPRMAPFLFISPKSKGNHITNLTRTARFLAEACNLVFYAASR 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G L + TK +A++ V+ AA ++ + VN KWLGGM+TNW T ++K RDL Sbjct: 70 GKSFLIIGTKKEAANSVVRAAIKARCHYVNKKWLGGMLTNWSTTETMLRKFRDLRTQQKT 129 Query: 126 ENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K++ ++R+ L++ L G++ M GLPD++ VVD + A++E L IP Sbjct: 130 GRLGCLPKRDAAILKRQLSHLQKHLGGVQYMTGLPDIVIVVDQQNQIKALRECITLGIPT 189 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT+ +PDLVD IP NDDS SI + + A G Sbjct: 190 IGLIDTDCDPDLVDLPIPANDDSVFSIRFILNKLVFAICKG 230 >gi|41058639|gb|AAR99306.1| ribosomal protein subunit B [Candidatus Blochmannia schaefferi] Length = 160 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 73/154 (47%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP M+ +IF RN HIIDL +TV M +KAL ++ + G+ILFV TK AS+ V + Sbjct: 2 WNPXMKPFIFGVRNKIHIIDLEKTVVMFKKALIELNKIASLKGKILFVGTKRAASESVKK 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRD 143 A Q+ VN +WLGGM+TNWKTV QSI++L+DL+ + + + TKKE L + R+ Sbjct: 62 TAITCNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLDTQFKDGTVKKLTKKEALILNRELI 121 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 L+ +L GI++MGGLPD +F V E +AI+EA Sbjct: 122 NLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEA 155 >gi|89243578|gb|ABD64908.1| ribosomal protein subunit 2 [Orobanche nowackiana] Length = 187 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 114/190 (60%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII+L++T L +A ++ + ++G + L V TK Sbjct: 1 FGHHSKKWNPKMSPYISAERRHRHIINLTKTARFLYEACYLVFNAASKGKQFLIVGTKEI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 +D V EAA + + VN KW GG++TNW ++K +D L+ ++ G KK Sbjct: 61 TADLVEEAAITARCHFVNKKWTGGLLTNWPITEARLKKFKD---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + +++L GI+ M GLPD++ ++D N E A+QE L+IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKSLGGIKSMNGLPDIVIILDQNEEYKALQECITLKIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 P L D IP Sbjct: 178 PYLADISIPA 187 >gi|187763100|ref|YP_001876575.1| ribosomal protein S2 [Welwitschia mirabilis] gi|163311630|gb|ABY26788.1| ribosomal protein S2 [Welwitschia mirabilis] Length = 239 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 120/215 (55%), Gaps = 8/215 (3%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V G++ W+ Y R N HII+L QT L + ++ + IL V T+ Sbjct: 19 VHLGNKKNKWSLDRASYSLYRRKNRHIINLVQTAHFLSETCNLLFKAARKRKEILIVGTR 78 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF----- 130 +D V AAK++ + VN KW GG++TNW T + +++ R+L++ K + G Sbjct: 79 RYIADLVASAAKKAQCHYVNYKWQGGLLTNWSTTKERLKRFRNLKQ---KYDSGLFHRRR 135 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 TKKE IE++ + L + L GI M LPD++ +VD +E A++E R LRIP +++VDT Sbjct: 136 TKKEIALIEKQLELLYQYLKGILYMKKLPDIVIIVDQQKESTAVRECRALRIPTISLVDT 195 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 N +PDLVD IP NDD+ S+ L + + SA G Sbjct: 196 NCDPDLVDIPIPANDDAPGSVRLILNRLMSAVSAG 230 >gi|83745337|gb|ABC42380.1| ribosomal protein subunit 2 [Orobanche rapum-genistae] Length = 187 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 111/188 (59%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V TK Q Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRLKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVGKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|239994628|ref|ZP_04715152.1| ribosomal protein S2 [Alteromonas macleodii ATCC 27126] Length = 145 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/140 (48%), Positives = 96/140 (68%), Gaps = 1/140 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL +S ++ Sbjct: 5 SMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYLSGVASKK 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK A + V +AA + QY VN +WLGGM+TNWKTV QSI++L+DLE+ Sbjct: 65 GKILFVGTKRAAGEAVKDAALKCDQYYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQDG 124 Query: 127 N-QGFTKKERLNIERKRDKL 145 + TKKE L ++R+ DKL Sbjct: 125 TFEKLTKKEALMLQREMDKL 144 >gi|325973209|ref|YP_004250273.1| 30S ribosomal protein S2 [Mycoplasma suis str. Illinois] gi|323651811|gb|ADX97893.1| 30S ribosomal protein S2 [Mycoplasma suis str. Illinois] Length = 262 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 143/227 (62%), Gaps = 4/227 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +++E + G ++ LW PKM Y+ E HII+L +T+ LQ + D Sbjct: 9 SLEKMIEFDLHLGAKSRLWEPKMAPYLLKEEYKKRHIINLEKTMEHLQSVYDYLYDLSRS 68 Query: 66 GGRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G I+FV++K++ +D V E+AKR + + +WLGG+ TN+K V++++ KL +L++ L Sbjct: 69 GLEIMFVSSKNKVIADIVKESAKRVNAFYITQRWLGGLFTNFKQVNKTLNKLTELDDFLR 128 Query: 125 KEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +EN Q TKKE + +K+ K+++ DGI+ + LP+++ + + + + I+EA+++ I Sbjct: 129 QENLHQQLTKKEISQLRKKKQKIEKNYDGIKGLSKLPNVLVIFNPVNDLIPIKEAKKMDI 188 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 P+V VV++N+NP+++D+ IP N+ S +SI L +L+ A + + ++ Sbjct: 189 PVVGVVNSNNNPEIIDFSIPANNFSPKSIYLIANLLCDAIAEAVGQE 235 >gi|12044922|ref|NP_072732.1| 30S ribosomal protein S2 [Mycoplasma genitalium G37] gi|255660390|ref|ZP_05405799.1| 30S ribosomal protein S2 [Mycoplasma genitalium G37] gi|1350974|sp|P47316|RS2_MYCGE RecName: Full=30S ribosomal protein S2 gi|1045746|gb|AAC71288.1| ribosomal protein S2 [Mycoplasma genitalium G37] gi|166078998|gb|ABY79616.1| ribosomal protein S2 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 284 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 4/230 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +L E G WNPKM +I ER +N ++ L L+ A I D V Sbjct: 13 SLNKLSEMRTNIGMVKRYWNPKMGFFIEPERKHNNDLLKLDLQYQALKTAYNFIKDVVKN 72 Query: 66 GGRILFVATKSQ-ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G+ILFV TK+ V++ AKR + +WLGG +TN+KT+S SI KL L E Sbjct: 73 HGQILFVGTKNDYVKKLVIDIAKRVNVAYITQRWLGGTLTNFKTLSISINKLNKLVEQQK 132 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + R+ ++L++ G++++ LP+L+ + D EK A+ EA L+IP+ Sbjct: 133 QNANDLTKKENLLLSREIERLEKFFGGVKNLKRLPNLIVIDDPVYEKNAVLEANSLKIPV 192 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSY 232 VA+ +TN+NP+LVD++IP N+ +S L +L+A A + G ++Y Sbjct: 193 VALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAIAEAKGFETLYAY 242 >gi|309322261|ref|YP_003934339.1| ribosomal protein S2 [Monsonia speciosa] gi|197131520|gb|ACH47278.1| ribosomal protein S2 [Monsonia speciosa] gi|300069354|gb|ADJ66474.1| ribosomal protein S2 [Monsonia speciosa] Length = 240 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 127/225 (56%), Gaps = 9/225 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFC----ERNNTHIIDLSQTVPMLQKALQVISDTV 63 + +LL + V GHR WNP+M Y+ R + HI +L++T L +A ++ Sbjct: 10 LEELLRARVHLGHRIKKWNPRMAPYVSISKTKRRKDRHITNLTRTARFLAEACDLVFYAA 69 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ++G R L V T ++ V+ AA ++ + VN KWLGGM+TNW T +++LRDL Sbjct: 70 SKGSRFLIVGTTKNVANSVVRAAIKARCHYVNKKWLGGMLTNWSTTEMKLRQLRDLRR-- 127 Query: 124 NKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ GF K++ +R+ +L++ L G++ M GLPD++ VV+ A++E L Sbjct: 128 AQKTGGFDRLRKRDAAISKRQLKQLQKYLGGVQYMTGLPDIVIVVEQQPAVTALRECITL 187 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + ++DT+ +PDLVD IP NDDS SI L + + A +G Sbjct: 188 GIPTICLIDTDCDPDLVDLPIPANDDSISSIRLILNKLVFAICEG 232 >gi|83745325|gb|ABC42374.1| ribosomal protein subunit 2 [Orobanche lutea] Length = 187 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 112/188 (59%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HII+L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHGIKKWNPKMAPYISAKRKGIHIINLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + +LRDL E+ + + + +K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQLRDLRIEQKMGRFKR-LSKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVGKRQLSHLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|195928745|gb|ACG56052.1| ribosomal protein subunit 2 [Agalinis linifolia] Length = 185 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 112/183 (61%), Gaps = 3/183 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 4 LEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 64 QFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + Sbjct: 124 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTI 182 Query: 186 AVV 188 ++ Sbjct: 183 CLI 185 >gi|83745331|gb|ABC42377.1| ribosomal protein subunit 2 [Orobanche grossheimii] Length = 187 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 112/188 (59%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI+ +R HI +L +T L +A ++ D +RG + L V TK Q Sbjct: 1 FGHDIRKWNPKMAPYIYAKRKGIHITNLIKTASFLSEACNLVFDAASRGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + +DL E+ + + + +K++ Sbjct: 61 VANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHEFKDLRIEQKMGRFKR-LSKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +++ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVGKKQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|83745333|gb|ABC42378.1| ribosomal protein subunit 2 [Orobanche flava] Length = 187 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +R + L V TK Q Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRRKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + TK++ Sbjct: 61 VANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LTKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN +PD Sbjct: 120 AVGKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|41058631|gb|AAR99302.1| ribosomal protein subunit B [Candidatus Blochmannia laevigatus] Length = 156 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 74/156 (47%), Positives = 101/156 (64%), Gaps = 5/156 (3%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP M+ +IF RN HIIDL T M ++AL ++ A G+ILFV TK AS+ V + Sbjct: 2 WNPXMKPFIFGVRNKIHIIDLETTSVMFKQALIELNKIAALKGKILFVGTKRAASESVKK 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERK 141 A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + ++ F TKKE L + R+ Sbjct: 62 TALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQDGTFKKLTKKEALILNRE 119 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 L+ +L GI++MGGLPD +F V E +AI+EA Sbjct: 120 LINLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEA 155 >gi|309322095|ref|YP_003933911.1| ribosomal protein S2 [Erodium texanum] gi|197131512|gb|ACH47274.1| ribosomal protein S2 [Erodium texanum] gi|300069188|gb|ADJ66310.1| ribosomal protein S2 [Erodium texanum] Length = 241 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 13/226 (5%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF----CERNNTHIIDLSQTVPMLQKALQVISDTV 63 + +LL V GH WNP+M Y+ C+ N HI +L++T L +A ++ Sbjct: 10 LEELLGEAVHLGHGIKKWNPRMAPYLLISPKCKDN--HITNLTRTARFLAEACNLVFYAA 67 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + G R L V T + S+ V++AA ++ + VN KWLGGM+TNW T ++ RDL Sbjct: 68 SEGKRFLIVGTTKKVSNYVVQAAIKARCHYVNKKWLGGMLTNWSTAETMLRTFRDLRTY- 126 Query: 124 NKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +N G F K++ ++R+ L++ LDG++ M GLPD++ V+D A+ E Sbjct: 127 --QNTGRLDRFPKRDAAILKRQLSHLQKYLDGVQYMTGLPDIVIVLDQQDGFTALLECTA 184 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP + ++DT+ +P+LVD+ IP ND+S SI + + A +G Sbjct: 185 LGIPTIGLIDTDCDPNLVDFPIPANDESILSIRFILNKLVLAICEG 230 >gi|165910479|gb|ABY73994.1| ribosomal protein S2 [Cuscuta japonica] Length = 190 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 1/188 (0%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP+M +I +R HI +L++T L +A ++ D RG + L V T ++A+D V Sbjct: 2 WNPQMAPFIAAKRKGIHITNLTRTARFLSEACDLVFDAARRGKKFLIVGTNNKAADSVAR 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRD 143 A++++ + VN KWL GM+TNW T + K RDL K K++ +R+ Sbjct: 62 ASRKARCHYVNKKWLAGMLTNWSTTETRLNKFRDLRTEQKKGGLNHLPKRDATMFKRQLA 121 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 +L+ L GI+ M GLPD++ +VD ++E A++E L IP + ++DTN +P+L D IP Sbjct: 122 RLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPTICLIDTNCDPNLSDISIPA 181 Query: 204 NDDSSRSI 211 NDD+ SI Sbjct: 182 NDDAISSI 189 >gi|115531903|ref|YP_784059.1| ribosomal protein S2 [Pelargonium x hortorum] gi|122164291|sp|Q06FX2|RR2_PELHO RecName: Full=30S ribosomal protein S2, chloroplastic gi|112382057|gb|ABI17250.1| ribosomal protein S2 [Pelargonium x hortorum] Length = 246 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ + V GH NP+M YI + +T I +L +T L + ++ + ++G + L Sbjct: 13 MVAARVHLGHDIKKRNPRMAPYISAKLKDTDITNLKKTARFLSETCDLVFEAASKGKKFL 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V TK + ++ V +AA+ + + VN KWLGGM+TNW T + + K RDL + N+ Sbjct: 73 IVGTKKEVANSVAQAARTAGCHYVNQKWLGGMLTNWSTTKKRLHKFRDLIRQQGRLNR-L 131 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 K++ ++R+ L+++L G++ M LPD++ ++D + E A++E LRIP + ++DT Sbjct: 132 PKRDAAILKRQLFHLQKSLGGVKYMKELPDIVIILDQHGEFTALRECISLRIPTIGLIDT 191 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 N +PDLVD IP NDDS SI + + A G +R+ Sbjct: 192 NCDPDLVDLPIPANDDSIPSIRFILNKLILAICKGRSRR 230 >gi|115443588|ref|YP_778607.1| 30S ribosomal protein S2 [Bigelowiella natans] gi|122233783|sp|Q06J20|RR2_BIGNA RecName: Full=30S ribosomal protein S2, chloroplastic gi|110810233|gb|ABG91439.1| 30S ribosomal protein S2 [Bigelowiella natans] Length = 281 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 127/216 (58%), Gaps = 10/216 (4%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI--SDT 62 QF I ++L++GV FGH+ WNPKM +I+ + HIID+ Q+ L+KA +++ Sbjct: 36 QF-ILKMLKAGVHFGHKIKKWNPKMSPFIYQKLQGIHIIDIIQSYTYLKKACKLVYSKSL 94 Query: 63 VARGGRILFVATKSQAS--DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 LFV TK Q+ + + A R + +N+KWL GM+TNW+ ++SI L+ L+ Sbjct: 95 TDNYNTFLFVGTKKQSPIPNSIFYHASRCNSFYINNKWLSGMLTNWENTTRSINTLKYLK 154 Query: 121 ELLNKENQGFTK---KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + ++ F+K K I++K+++L++ GI++M LP + +V + E A +E Sbjct: 155 --VYQKTNMFSKLSMKTHSIIDKKKNRLEKYFGGIQNMTSLPSTVILVGQHNEITASKEC 212 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 R+L I + ++DT+ NP+ VD IP NDDSS S+ L Sbjct: 213 RKLGINNITILDTDCNPEFVDLFIPANDDSSSSLNL 248 >gi|83745323|gb|ABC42373.1| ribosomal protein subunit 2 [Orobanche teucrii] Length = 189 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 5/190 (2%) Query: 18 FGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 FGH WNPKM YI+ + HII+L +T L +A ++ D +RG + L V TK Sbjct: 1 FGHGIKKWNPKMAPYIYISAKHKGIHIINLIKTARFLSEACNLVFDAASRGKQFLIVGTK 60 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKK 133 Q ++ V AA ++ +CVN KWLGG +TNW T + + RDL E+ + + + K+ Sbjct: 61 KQTANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRIEQKMGRFKR-LPKR 119 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 120 DAAVCKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 179 Query: 194 PDLVDYVIPG 203 PDL D+ IP Sbjct: 180 PDLADFSIPA 189 >gi|308233711|ref|ZP_07664448.1| SSU ribosomal protein S2P [Atopobium vaginae DSM 15829] Length = 175 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 102/148 (68%), Gaps = 1/148 (0%) Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKR 142 E AKR +N +WLGGM+TN+ T+ I ++ +LE ++ + KKE+ + ++ Sbjct: 1 EQAKRCDMPYINQRWLGGMLTNFVTMRSRIDRMEELEAMVEDGRMAALPKKEQAVLGKEL 60 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIP 202 +KL+R L G+RDM LP +F+VD+ RE++AI+EA RL IP+VA++DTNS+PD+VDY IP Sbjct: 61 EKLQRNLGGVRDMHALPQALFIVDSKREEIAIREANRLHIPVVALLDTNSDPDVVDYGIP 120 Query: 203 GNDDSSRSIALFCDLVASAAIDGIARQH 230 NDD+ RS+ L C+LVA A + G ++ Sbjct: 121 ANDDAIRSVNLMCELVADAVLAGKGKEQ 148 >gi|301633721|gb|ADK87275.1| ribosomal protein S2 [Mycoplasma pneumoniae FH] Length = 294 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 4/224 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ +L E G WNPKM +I ER NN H + L LQ A + + Sbjct: 19 SLAKLGEMRTHVGMVKRYWNPKMGFFIEPERKHNNDHFV-LELQRQSLQTAYNYVKEVAQ 77 Query: 65 RGGRILFVATKSQ-ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G+ILFV TK+ V AKR + +WLGG +TN+KT+S SI KL L E Sbjct: 78 NNGQILFVGTKNDYVKKLVNNIAKRVHVAFITQRWLGGTLTNFKTLSISINKLNKLVEKQ 137 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKE L + R+ ++L++ G++ + LP+L+ V D EK A+ EA LRIP Sbjct: 138 AENAADLTKKENLMLSREIERLEKFFGGVKSLKRLPNLLIVDDPVYEKNAVAEANSLRIP 197 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VA+ +TN+NP+LVD++IP N+ +S L +L+A A + A Sbjct: 198 VVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAKA 241 >gi|83745339|gb|ABC42381.1| ribosomal protein subunit 2 [Orobanche densiflora] Length = 187 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A++ V AA ++ +CVN KWLGG +TNW T + + RDL E+ + + + K++ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVGKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|83745299|gb|ABC42361.1| ribosomal protein subunit 2 [Orobanche colorata] Length = 187 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D + G + L V TK Q Sbjct: 1 FGHDIKKWNPKMAPYISAKRKGIHITNLIRTARFLSEACNLVFDAASMGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 A+ V AAK++ +CVN KW GGM+TNW + K DL+ K+ G KK Sbjct: 61 AASLVARAAKKAECHCVNKKWFGGMLTNWSLTEMRLYKFGDLKM---KKKMGSLKSLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + +R+ +L+++L GI+ M LPD++ +VD + E A++E L+IP + ++DTN + Sbjct: 118 DAAVGKRQLSRLQKSLGGIKYMTKLPDIVIIVDQHEEYTALRECITLKIPTICLIDTNCD 177 Query: 194 PDLVDYVIPG 203 PDL IP Sbjct: 178 PDLATISIPA 187 >gi|89243574|gb|ABD64906.1| ribosomal protein subunit 2 [Orobanche elatior] Length = 187 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI R HII+L +T L +A ++ D + G + L V TK Q Sbjct: 1 FGHDIRKWNPKMAPYISANRKGIHIINLIKTARFLSEACNLVFDAASMGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|83745315|gb|ABC42369.1| ribosomal protein subunit 2 [Orobanche owerinii] gi|83745450|gb|ABC42431.1| ribosomal protein subunit 2 [Phelipanche hirtiflora] Length = 187 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI R HI +L +T L +A ++ D +RG ++L V TK + Sbjct: 1 LGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQLLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AAK++ +CVN KWLGG +TNW T + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAKKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLPIPA 187 >gi|83745392|gb|ABC42406.1| ribosomal protein subunit 2 [Orobanche rosmarina] gi|83745394|gb|ABC42407.1| ribosomal protein subunit 2 [Orobanche rosmarina] gi|83745398|gb|ABC42409.1| ribosomal protein subunit 2 [Orobanche rosmarina] gi|83745400|gb|ABC42410.1| ribosomal protein subunit 2 [Orobanche rosmarina] Length = 187 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMRPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N E A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|13507947|ref|NP_109896.1| 30S ribosomal protein S2 [Mycoplasma pneumoniae M129] gi|2500389|sp|P75560|RS2_MYCPN RecName: Full=30S ribosomal protein S2 gi|1674326|gb|AAB96271.1| ribosomal protein S2 [Mycoplasma pneumoniae M129] Length = 294 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 4/224 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ +L E G WNPKM +I ER NN H + L LQ A + + Sbjct: 19 SLAKLGEMRTHVGMVKRYWNPKMGFFIEPERKHNNDHFV-LELQRQSLQTAYNYVKEVAQ 77 Query: 65 RGGRILFVATKSQ-ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G+ILFV TK+ V AKR + +WLGG +TN+KT+S SI KL L E Sbjct: 78 NNGQILFVGTKNDYVKKLVNNIAKRVDVAFITQRWLGGTLTNFKTLSISINKLNKLVEKQ 137 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKE L + R+ ++L++ G++ + LP+L+ V D EK A+ EA LRIP Sbjct: 138 AENAADLTKKENLMLSREIERLEKFFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIP 197 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VA+ +TN+NP+LVD++IP N+ +S L +L+A A + A Sbjct: 198 VVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAKA 241 >gi|50304367|ref|XP_452133.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641265|emb|CAH02526.1| KLLA0B13519p [Kluyveromyces lactis] Length = 406 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 19/225 (8%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +L Q +I +L+ +GV G LW + YI+ E HIIDL+QT+ L++A QV+ Sbjct: 192 SLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNQTLSHLKRAAQVVEG 251 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ +++AA+R Y V SKW+ G +TN +S S ++ +++ Sbjct: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWER-HEVDY 310 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + T E ++I + PDL+ V++ + A++EA + R Sbjct: 311 FGNPTGRELTLNESMSIIK------------------PDLLVVLNPTENRNALKEAMKAR 352 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +P + ++DT+S P LV Y IP NDDS RS++L ++A A G+ Sbjct: 353 VPTIGIIDTDSEPSLVTYPIPANDDSLRSVSLLTSILAKAGERGV 397 >gi|83745311|gb|ABC42367.1| ribosomal protein subunit 2 [Orobanche artemisiae-campestris] Length = 187 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AAK++ +CVN KWLGG +TNW T + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAKKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLPIPA 187 >gi|83745327|gb|ABC42375.1| ribosomal protein subunit 2 [Orobanche sintenisii] Length = 187 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHDIRKWNPKMAPYISATRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|83745492|gb|ABC42447.1| ribosomal protein subunit 2 [Orobanche gratiosa] Length = 187 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RGDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|41058641|gb|AAR99307.1| ribosomal protein subunit B [Candidatus Blochmannia vicinus] Length = 156 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/154 (44%), Positives = 101/154 (65%), Gaps = 1/154 (0%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP M+ +IF RN HII+L T+ M ++AL ++ + G+ILFV TK AS+ + + Sbjct: 2 WNPXMKPFIFGVRNKIHIINLETTILMFKQALVELNKIASLKGKILFVGTKRAASESIKK 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRD 143 A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + + TKKE L + R+ Sbjct: 62 TALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFKKVTKKEALILNRELI 121 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 L+ +L GI++MGGLPD +F + E +AI+EA Sbjct: 122 NLENSLGGIKNMGGLPDAIFAIGATHEHIAIKEA 155 >gi|83745464|gb|ABC42433.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 187 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSVTEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745484|gb|ABC42443.1| ribosomal protein subunit 2 [Phelipanche hirtiflora] gi|83745496|gb|ABC42449.1| ribosomal protein subunit 2 [Phelipanche mutelii] Length = 187 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNEM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745466|gb|ABC42434.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745468|gb|ABC42435.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745486|gb|ABC42444.1| ribosomal protein subunit 2 [Orobanche gratiosa] gi|83745488|gb|ABC42445.1| ribosomal protein subunit 2 [Orobanche gratiosa] gi|83745494|gb|ABC42448.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745500|gb|ABC42451.1| ribosomal protein subunit 2 [Phelipanche lavandulacea] gi|83745502|gb|ABC42452.1| ribosomal protein subunit 2 [Phelipanche lavandulacea] Length = 187 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745462|gb|ABC42432.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 187 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLAKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|325846536|ref|ZP_08169451.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481294|gb|EGC84335.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 162 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 68/146 (46%), Positives = 98/146 (67%), Gaps = 5/146 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++LLE+GV FGH+ WNPKM ++IF ERN +IIDL++T + KA +VI D + G Sbjct: 5 SMKKLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLAKTSNQIDKAYEVIKDIASEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV TK QA D + + AKR QY V+++WLGGM+TN+ T+ S+ KL+ E + +E Sbjct: 65 GSILFVGTKKQAQDSIEQEAKRCGQYYVSNRWLGGMLTNFNTIRNSVNKLKKYETM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRAL 149 + F KKE L ++ DKLK+ L Sbjct: 123 DGTFDLLPKKEVLQYNKEMDKLKKIL 148 >gi|83745498|gb|ABC42450.1| ribosomal protein subunit 2 [Phelipanche lavandulacea] Length = 187 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADIPIPA 187 >gi|83745335|gb|ABC42379.1| ribosomal protein subunit 2 [Orobanche gracilis] Length = 187 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D RG + L V TK + Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAARRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A++ V AA ++ +CVN KWLGG +TNW T + + RDL E+ + + + TK++ Sbjct: 61 AANSVTCAAIKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKR-LTKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ GI+ M GLPD++ +VD + E A++E L IP + ++DTN +P Sbjct: 120 AVGKRQLSRLQTYFGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPY 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|83745432|gb|ABC42423.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 187 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKH-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ ++D + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|298252791|ref|ZP_06976585.1| ribosomal protein S2 [Gardnerella vaginalis 5-1] gi|297533155|gb|EFH72039.1| ribosomal protein S2 [Gardnerella vaginalis 5-1] Length = 203 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/188 (43%), Positives = 121/188 (64%), Gaps = 10/188 (5%) Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL--LNKENQG 129 + TK QA + V A R V +WLGGM+TN++TVS +++L++LEE+ + G Sbjct: 1 MGTKKQAQEAVQNQATRVNMPYVCERWLGGMLTNFQTVSTRVKRLKELEEMDFSDVRGSG 60 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L IP+VA+VD Sbjct: 61 LTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKLGIPVVAIVD 120 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-------SAGE 242 TN++P+ V+Y IP NDD+ R I L L+A A +G+ +H+ GA ++ +A E Sbjct: 121 TNTDPEAVEYPIPANDDAIRGIELLTSLMADAVAEGLL-EHAGKGAKSEGNDAQPMAAWE 179 Query: 243 TVVHSKEG 250 + +KEG Sbjct: 180 KELLTKEG 187 >gi|83745307|gb|ABC42365.1| ribosomal protein subunit 2 [Orobanche coerulescens] Length = 187 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI + HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHGIKKWNPKMAPYISAKHKGIHITNLVKTARFLYEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 A++ V AA ++ +CVN KWLGG +TNW T + + RDL K+ G K+ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRI---KQKMGRFKRLPKR 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + +R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + ++DTN + Sbjct: 118 DAAVGKRQLSRLQTYLGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNCD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADLSIPA 187 >gi|83745490|gb|ABC42446.1| ribosomal protein subunit 2 [Orobanche gratiosa] Length = 187 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQERINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|156598491|gb|ABU85504.1| ribosomal protein S2 [Passiflora biflora] Length = 236 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 5/221 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++L +GV GH WNPKM YI HI DL++T L +A ++ + Sbjct: 10 LEEMLNAGVHLGHAIKKWNPKMAPYISGNLKGNHITDLTRTARFLSEACNLLFHAASSRN 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V TK + +D V AA R+ + VN KW G++TNW T +QK RDL + ++ Sbjct: 70 EFLIVCTKKKRADLVARAAIRARCHYVNKKWRAGILTNWSTTQTRLQKFRDLT--MYQKT 127 Query: 128 QGFTKKERLNIER---KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 T+ + ++ R + +L++ L GI+ M LPD++ ++D ++ A++E + IP Sbjct: 128 GKLTRLPKRDVSRLNKQLSRLEKYLGGIKYMTRLPDIVIILDQQKDYTALRECITMGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDTN +PDL D +IP NDD++ S + + A G Sbjct: 188 ICLVDTNCDPDLADLLIPANDDNTVSFRFILNKLVFAICKG 228 >gi|83745396|gb|ABC42408.1| ribosomal protein subunit 2 [Orobanche rosmarina] Length = 187 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMRPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N E A+QE L IP ++++DT+S+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTISLIDTDSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745341|gb|ABC42382.1| ribosomal protein subunit 2 [Cistanche phelypaea subsp. lutea] Length = 187 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 112/188 (59%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPK+ YI +R HI +L++T L +A ++ D +RG + L V TK++ Sbjct: 1 FGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ + VN KWLGGM+TNW T + + RDL E+ + + N+ +++ Sbjct: 61 VANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKMGRLNR-LPRRDS 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ +L+ L GI+ M LPD++ +VD + E A+QE L IP + ++DTN +PD Sbjct: 120 AVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADISIPA 187 >gi|83745343|gb|ABC42383.1| ribosomal protein subunit 2 [Cistanche phelypaea subsp. phelypaea] Length = 187 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPK+ YI +R HI +L++T L +A ++ D +RG + L V TK++ Sbjct: 1 FGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A++ V AA ++ + VN KWLGGM+TNW T + + RDL E+ + + N+ +++ Sbjct: 61 AANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKMGRLNR-LPRRDS 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADISIPA 187 >gi|165910467|gb|ABY73988.1| ribosomal protein S2 [Cuscuta applanata] Length = 177 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 69/177 (38%), Positives = 108/177 (61%), Gaps = 7/177 (3%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 YI +R HI +L++T +L +A ++ D +RG + L V T + A + V A+ R+ Sbjct: 4 YISAKRKGIHITNLTRTARLLSEACDLVFDAASRGKKFLIVGTNNVADEAVARASIRARC 63 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIERKRDKLKR 147 + VN KWLGGM+TNW T +QK RDL K+ +G KKE ++R+ +L++ Sbjct: 64 HYVNKKWLGGMLTNWSTTETRLQKFRDLRM---KQKKGGLNNLPKKEATMLKRQLARLQK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 L GI+ M GLPD++ ++D ++E A+QE R L IP ++++DTN +P+L D IP N Sbjct: 121 YLGGIQYMTGLPDIVIIIDQHKESTALQECRNLGIPTISLIDTNCDPNLSDIPIPAN 177 >gi|83745476|gb|ABC42439.1| ribosomal protein subunit 2 [Phelipanche bungeana] gi|83745478|gb|ABC42440.1| ribosomal protein subunit 2 [Phelipanche bungeana] gi|83745480|gb|ABC42441.1| ribosomal protein subunit 2 [Phelipanche bungeana] gi|83745482|gb|ABC42442.1| ribosomal protein subunit 2 [Phelipanche bungeana] Length = 187 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 110/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALLECLHLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745291|gb|ABC42357.1| ribosomal protein subunit 2 [Conopholis americana] Length = 187 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R H +L++T L +A ++ D + G + L V TK + Sbjct: 1 FGHGTRKWNPKMAPYILAKRKGIHFSNLTRTARFLSEACDLVFDAASMGKQFLIVDTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 A+D V AA ++ +CVN KWL GM+TNW T + K RDL E+ + N+ KK+ Sbjct: 61 AADSVEWAAIKARCHCVNKKWLCGMLTNWSTTETLLNKFRDLRMEQKTGRLNR-LKKKDV 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 ++R+ +L+ L GI+ M LPD++ +VD + + A++E L IP + ++DTN +PD Sbjct: 120 AVVKRQLARLQAYLYGIKYMTRLPDIVIIVDQHEDYKALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADISIPA 187 >gi|110589440|gb|ABG77229.1| 30S ribosomal subunit protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 140 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 2/135 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+P+ A+ I A G Sbjct: 5 SMRQMLEAGVHFGHQTRYWNPKMSPYIFGHRNKIHIVNLEKTLPLYNDAMNYIGSLSANG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G+ILFV TK A D V E A+R VN +WLGGM+TN+KT+ QSI++L++LE + Sbjct: 65 GKILFVGTKRAARDAVREEAQRCGMPFVNHRWLGGMLTNFKTIKQSIKRLKELEAMFEDG 124 Query: 127 N--QGFTKKERLNIE 139 + Q F KKE L E Sbjct: 125 SVEQRFNKKEGLGPE 139 >gi|195928743|gb|ACG56051.1| ribosomal protein subunit 2 [Agalinis laxa] Length = 184 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 4/185 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 2 LEEMLEAGVHFGHGIKKWNPKMAPYISAKRKGNHITNLTRTARFLSEACNLVFDAASSGK 61 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 + L V TK++A V AA ++ +CVN KWLGGM+TNW T +QK RDL E+ + Sbjct: 62 QFLIVGTKNKA-HLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 120 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + Sbjct: 121 LNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTI 179 Query: 186 AVVDT 190 ++DT Sbjct: 180 CLIDT 184 >gi|83745313|gb|ABC42368.1| ribosomal protein subunit 2 [Orobanche hederae] gi|83745319|gb|ABC42371.1| ribosomal protein subunit 2 [Orobanche crenata] gi|83745321|gb|ABC42372.1| ribosomal protein subunit 2 [Orobanche amethystea] Length = 187 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 109/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 +GH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 WGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|302824463|ref|XP_002993874.1| hypothetical protein SELMODRAFT_137779 [Selaginella moellendorffii] gi|300138241|gb|EFJ05015.1| hypothetical protein SELMODRAFT_137779 [Selaginella moellendorffii] Length = 228 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 98/194 (50%), Gaps = 1/194 (0%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E+G FGH+ WNPKM + ER H ID +QT +A + +G + Sbjct: 15 EAGAHFGHQARRWNPKMAPHTPTERKGIHTIDPTQTARSSPEARDPAAGAAGKGKQFPIA 74 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTK 132 TK QA+D + AA R+ ++ N KWLGGM+TNW T+ + +L D E + N GF Sbjct: 75 GTKYQAADVIRSAAIRAQRHYANEKWLGGMLTNWSTMETRLHRLEDSEGKAQQLN-GFPD 133 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 + R+ + +R G R M LPD+ VD E AI+E IP + DT+ Sbjct: 134 RGAATSGRQSAQPRRDPAGTRYMKSLPDIATTVDQREEPTAIRECTAPGIPTTRLADTDC 193 Query: 193 NPDLVDYVIPGNDD 206 +PDL D IP NDD Sbjct: 194 DPDLTDIPIPANDD 207 >gi|83745474|gb|ABC42438.1| ribosomal protein subunit 2 [Phelipanche bungeana] Length = 187 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ Y+ ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYVSAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALLECLHLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|255713408|ref|XP_002552986.1| KLTH0D06094p [Lachancea thermotolerans] gi|238934366|emb|CAR22548.1| KLTH0D06094p [Lachancea thermotolerans] Length = 402 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 121/225 (53%), Gaps = 19/225 (8%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ + +I +LL +GV G LW P + YI+ E HIIDL++T+ L++A +V+ Sbjct: 188 AIEELSISKLLAAGVHLGQSTSLWRPSTQPYIYGEYKGIHIIDLNKTLSNLKRAAKVVQG 247 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 +GG ILF+ T+ + EAAKR+ + V+++W+ G +TN +S S+ + +++ Sbjct: 248 VAEKGGTILFLGTRDGQKRALQEAAKRTNGFYVSTRWIPGTLTNPTEIS-SVWERHEIDF 306 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N+ T E I + PDL+ V++ + A+ EA + R Sbjct: 307 ADTPTNRPLTSDEEAAIVK------------------PDLLVVLNPTENRNALNEAMQAR 348 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +P V ++DT+S P LV Y IPGNDDS RS+ + ++A A G+ Sbjct: 349 VPTVGIIDTDSEPSLVTYPIPGNDDSLRSVNIILSVLAKAGEVGL 393 >gi|83745447|gb|ABC42430.1| ribosomal protein subunit 2 [Phelipanche oxyloba] Length = 187 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|296399253|gb|ADH10428.1| ribosomal protein S2 [Selaginella moellendorffii] Length = 228 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 98/194 (50%), Gaps = 1/194 (0%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E+G FGH+ WNPKM + ER H ID +QT +A + +G + Sbjct: 15 EAGAHFGHQARRWNPKMAPHTPTERKGIHTIDPTQTARSSPEARDPAAGAAGKGKQFPIA 74 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTK 132 TK QA+D + AA R+ ++ N KWLGGM+TNW T+ + +L D E + N GF Sbjct: 75 GTKYQAADVIRSAAIRAQRHYANEKWLGGMLTNWSTMETRLHRLEDSEGKAQQLN-GFPD 133 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 + R+ + +R G R M LPD+ VD E AI+E IP + DT+ Sbjct: 134 RGAATSGRQSAQPRRDPAGTRYMKSLPDIATTVDQREEPTAIRECTAPGIPTTRLADTDC 193 Query: 193 NPDLVDYVIPGNDD 206 +PDL D IP NDD Sbjct: 194 DPDLTDIPIPANDD 207 >gi|83745309|gb|ABC42366.1| ribosomal protein subunit 2 [Orobanche bartlingii] Length = 187 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHDIRKWNPKMAPYISATCKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|83745381|gb|ABC42401.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745329|gb|ABC42376.1| ribosomal protein subunit 2 [Orobanche ozanonis] Length = 187 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHDIRKWNPKMAPYISANCKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|167950451|ref|ZP_02537525.1| SSU ribosomal protein S2P [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 135 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 87/134 (64%), Gaps = 2/134 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+P+ A+ I A GG Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMSPYIFGHRNKIHIVNLEKTLPLYNDAMNYIGSLSANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK A D V E A+R VN +WLGGM+TN+KT+ QSI++L++LE + + Sbjct: 61 KILFVGTKRAARDAVREEAQRCGMPFVNHRWLGGMLTNFKTIKQSIKRLKELEAMFEDGS 120 Query: 128 --QGFTKKERLNIE 139 Q F KKE L E Sbjct: 121 VEQRFNKKEGLGPE 134 >gi|83745390|gb|ABC42405.1| ribosomal protein subunit 2 [Orobanche rosmarina] Length = 187 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 109/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 F H + WNPKM YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FRHHSRKWNPKMRPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N E A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745375|gb|ABC42398.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKARCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|41058649|gb|AAR99311.1| ribosomal protein subunit B [Candidatus Blochmannia castaneus] Length = 150 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/147 (46%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP M+ +IF RN HIIDL T+ M ++AL ++ + G+ILFV TK AS+ V + Sbjct: 3 WNPXMKPFIFGVRNKIHIIDLETTILMFKQALIELNKIASLKGKILFVGTKRAASEAVKK 62 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRD 143 A Q+ VN++WLGGM+TNWKTV QSI++L+DLE + + Q TKKE L + R+ Sbjct: 63 TALACNQFFVNNRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFQKLTKKEALILNRELI 122 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNRE 170 L+ +L GI++MGGLPD +F V E Sbjct: 123 NLENSLGGIKNMGGLPDAIFAVGATHE 149 >gi|41058629|gb|AAR99301.1| ribosomal protein subunit B [Candidatus Blochmannia vafer] Length = 158 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 70/157 (44%), Positives = 98/157 (62%), Gaps = 7/157 (4%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP+M+ +IF +N HIIDL +T+ M KAL + G+ILFV TK A + + Sbjct: 4 WNPQMKPFIFGVQNKIHIIDLDKTILMFNKALVELKKITTLKGKILFVGTKRAARESIKS 63 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIER 140 A Q+ VN +WLGGM+TNWKTV QSI++L++LE N+ G TKKE L ++ Sbjct: 64 TALICGQFFVNHRWLGGMLTNWKTVRQSIKRLKELE---NQSQDGTFQKLTKKEVLILKH 120 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + L+ +L GI++MGGLPD +F V E +AI+EA Sbjct: 121 ELRGLENSLGGIKNMGGLPDAIFTVGAIHEHIAIKEA 157 >gi|41058643|gb|AAR99308.1| ribosomal protein subunit B [Candidatus Blochmannia ulcerosus] Length = 160 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 72/161 (44%), Positives = 101/161 (62%), Gaps = 5/161 (3%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP M+ +IF RN HIIDL +T+ M KAL + G+ILFV TK A + + Sbjct: 2 WNPXMKPFIFGVRNKIHIIDLDKTIIMFNKALIELKKISELKGKILFVGTKRAARESIKS 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERK 141 A Q+ VN +WLGGM+TNWKTV QSI++L++LE+ ++ F TKKE L ++R+ Sbjct: 62 TALICGQFFVNYRWLGGMLTNWKTVRQSIKRLKNLED--QSKDGTFDKLTKKEVLVLKRE 119 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + L+ +L GI++MG LPD +F V E +AI+EA L I Sbjct: 120 LNSLENSLGGIKNMGSLPDAVFTVGAAHECIAIKEANSLGI 160 >gi|83745385|gb|ABC42403.1| ribosomal protein subunit 2 [Phelipanche pulchella] gi|83745387|gb|ABC42404.1| ribosomal protein subunit 2 [Phelipanche pulchella] Length = 187 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW G +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP + ++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALHECLNLGIPTICLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745377|gb|ABC42399.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF----TKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCPPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|194033316|ref|YP_002000449.1| ribosomal protein S2 [Oedogonium cardiacum] gi|156619060|gb|ABU88208.1| ribosomal protein S2 [Oedogonium cardiacum] gi|186968933|gb|ACC97256.1| ribosomal protein S2 [Oedogonium cardiacum] Length = 307 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +++L+ G+ +GH +P+M+R+I E NN ++I+L QT L+K L ++ + Sbjct: 53 KKMLKRGMHYGHNIVKCHPEMKRFIKTESNNKNLINLIQTKYYLKKCLWTLAQLSYKQKN 112 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKEN 127 ILFV T +S + AA ++ + VN +WLGGM+TNWKT+ + I KL LE E +K Sbjct: 113 ILFVGTTIPSSRFIGTAAIKTRSFFVNIRWLGGMLTNWKTIKKLIIKLHTLEKEQKSKIF 172 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + KK+ +++R +L++ L GI + P+++ + R+ A E ++L I ++ Sbjct: 173 KNLPKKQSAARQKERLRLEKYLKGIALIQKFPEIIIMTSQKRDISAALECQKLGITNFSI 232 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +DT+ +P L DY+IP NDDS+ SI + A G+ Sbjct: 233 IDTDCDPRLADYIIPANDDSASSIKFILYYYSKAIRTGL 271 >gi|83745444|gb|ABC42429.1| ribosomal protein subunit 2 [Phelipanche bungeana] Length = 187 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 108/188 (57%), Gaps = 3/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WN KM YI RN HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNLKMAPYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKER 135 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKR-LPKRDA 119 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ +L+ + GI+ M GLPD++ ++D + E A++E L IP + ++DTN +PD Sbjct: 120 AVSKRQLSRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNCDPD 179 Query: 196 LVDYVIPG 203 L D IP Sbjct: 180 LADLSIPA 187 >gi|83745410|gb|ABC42414.1| ribosomal protein subunit 2 [Phelipanche cf. tunetana Schonswetter & Tribsch 10691] Length = 187 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HIIDL++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIIDLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW G +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + +VDTN++ Sbjct: 118 DAAVVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLVDTNAD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|195928793|gb|ACG56076.1| ribosomal protein subunit 2 [Agalinis setacea] Length = 169 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 99/164 (60%), Gaps = 2/164 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +A+ V AA ++ +CVN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASSGKQFLIVCTKKKAAHFVARAAIKARCHCVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 +QK RDL + ++ K++ ++R+ +L+R L GI+ M GLPD++ +VD + E Sbjct: 61 TRLQKFRDLR--MEQKTGRLPKRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIIVDQHEE 118 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 A++E L IP + ++DTN +PDL D IP NDDS SI L Sbjct: 119 YTALRECITLGIPTICLIDTNCDPDLADLPIPANDDSISSIRLI 162 >gi|83745383|gb|ABC42402.1| ribosomal protein subunit 2 [Phelipanche pulchella] Length = 187 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW G +TNW +Q+ R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQRFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP + ++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALHECLNLGIPTICLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|83745379|gb|ABC42400.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++ TNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIGTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|41058633|gb|AAR99303.1| ribosomal protein subunit B [Candidatus Blochmannia sayi] Length = 147 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/147 (46%), Positives = 98/147 (66%), Gaps = 1/147 (0%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN HII+L T+ M +KAL +S V+ G+ILFV TK AS+ V + A Q Sbjct: 1 FIFGVRNKIHIINLEITITMFKKALIELSKIVSLKGKILFVGTKRAASESVKKTAIICNQ 60 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALD 150 + VN +WLGGM+TNWKTV QSI++L+DLE + + + TKKE L + R+ L+ +L Sbjct: 61 FFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSKDGTFKKLTKKEVLILNRELTNLENSLG 120 Query: 151 GIRDMGGLPDLMFVVDTNREKLAIQEA 177 GI++MGGLPD +F + + E +AI+EA Sbjct: 121 GIKNMGGLPDAIFAIGSAHEHIAIKEA 147 >gi|50291821|ref|XP_448343.1| hypothetical protein [Candida glabrata CBS 138] gi|49527655|emb|CAG61304.1| unnamed protein product [Candida glabrata] Length = 397 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 21/223 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I +L+ +GV G LW + +I+ E N HIIDL+QT+ L++A QV+ Sbjct: 183 KMSIEKLMAAGVHLGQSTSLWRSSTQPFIYGEYNGIHIIDLNQTLAYLKRAAQVVEGVAE 242 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELL 123 RGG ILF+ T+ + EAAKR+ Y V+++W+ G +TN +S +K DL Sbjct: 243 RGGVILFLGTRKGQKVALEEAAKRTHGYFVSTRWIPGTLTNSTEISGGWEKHEVDL---- 298 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 Q L + K +K PDL+ V++ + A+ EA + R+P Sbjct: 299 ----QDKPTGRPLQTDEKSRIVK------------PDLLVVLNPTENRNALNEAMKSRVP 342 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+S P + Y IPGNDDS RS+ L ++A A G+ Sbjct: 343 TIGIVDTDSEPSFLTYPIPGNDDSLRSVNLLLGVLAKAGERGV 385 >gi|83745470|gb|ABC42436.1| ribosomal protein subunit 2 [Phelipanche oxyloba] Length = 187 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HII+L+QT L +A ++ +RG + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIINLTQTARFLYEACNLVFHAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL-EELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+L E + KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKARRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQDEDFTALLECLNLGIPTICLIDTNSDPDL 180 Query: 197 VDYVIPG 203 + IP Sbjct: 181 ANISIPA 187 >gi|83745472|gb|ABC42437.1| ribosomal protein subunit 2 [Phelipanche oxyloba] Length = 187 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HII+L+QT L +A ++ +RG + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIINLTQTARFLYEACNLVFHAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKYMRGLPDIVIILDQDEDFTALLECLNLGIPTICLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL + IP Sbjct: 178 PDLANISIPA 187 >gi|41058647|gb|AAR99310.1| ribosomal protein subunit B [Candidatus Blochmannia chromaiodes] Length = 147 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/149 (47%), Positives = 96/149 (64%), Gaps = 5/149 (3%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN HIIDL T M +KAL ++ A G+ILFV TK AS+ V + A Q Sbjct: 1 FIFGVRNKIHIIDLETTSVMFRKALIELNKIAALKGKILFVGTKRAASESVKKTALACNQ 60 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKLKRA 148 + VN +WLGGM+TNWKTV QSI++L+DLE + ++ F TKKE L + R+ L+ + Sbjct: 61 FFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQDGTFKKLTKKEALILNRELINLENS 118 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 L GI++MGGLPD +F V E +AI+EA Sbjct: 119 LGGIKNMGGLPDAIFAVGATHEHIAIKEA 147 >gi|83745301|gb|ABC42362.1| ribosomal protein subunit 2 [Orobanche anatolica] gi|83745303|gb|ABC42363.1| ribosomal protein subunit 2 [Orobanche anatolica] Length = 187 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 5/189 (2%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI + HI +L T L +A ++ D + G + L V TK Q Sbjct: 1 FGHDIKKWNPKMAPYISAKHKGIHITNLIITARFLSEACNLVFDAASMGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKE 134 A+ V AAK++ + VN KW GGM+TNW + K DL ++ K+ + F KK Sbjct: 61 AAYLVARAAKKAQCHYVNKKWFGGMLTNWSLTEMRLYKFGDL--IMKKKMRRFKSLPKKG 118 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 +R+ +L+++L GI+ M LPD++ ++D ++E A+QE L IP + ++DTN +P Sbjct: 119 AAVEKRQLSRLQKSLGGIKYMTKLPDIVIIIDQHKEYTALQECITLEIPTICLIDTNCDP 178 Query: 195 DLVDYVIPG 203 DL IP Sbjct: 179 DLATISIPA 187 >gi|83745351|gb|ABC42387.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] gi|83745355|gb|ABC42389.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 9/192 (4%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKKWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 +D V EAA ++ + VN KW GG++TNW S + ++L+ L KE +G KK Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTNW---SITEERLKYFNYLRVKEIKGGFDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTN 191 + ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+ Sbjct: 118 DAAVVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIPTISLIDTD 177 Query: 192 SNPDLVDYVIPG 203 S+PDL D IP Sbjct: 178 SDPDLADISIPA 189 >gi|83745347|gb|ABC42385.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 9/192 (4%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKEWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 +D V EAA ++ + VN KW GG++TNW S + ++L+ L KE +G KK Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTNW---SITEERLKYFNYLRVKEIKGGFDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTN 191 + ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+ Sbjct: 118 DAAVVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIPTISLIDTD 177 Query: 192 SNPDLVDYVIPG 203 S+PDL D IP Sbjct: 178 SDPDLADIPIPA 189 >gi|83745373|gb|ABC42397.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 LGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW G +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTSGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+ Sbjct: 118 DAAVVKRQLSRFQKNLGGIKSMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSD 177 Query: 194 PDLVDYVIPG 203 PDL D IP Sbjct: 178 PDLADISIPA 187 >gi|156848993|ref|XP_001647377.1| hypothetical protein Kpol_1018p50 [Vanderwaltozyma polyspora DSM 70294] gi|156118063|gb|EDO19519.1| hypothetical protein Kpol_1018p50 [Vanderwaltozyma polyspora DSM 70294] Length = 375 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 120/222 (54%), Gaps = 19/222 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I +L+ +GV G LW + YI+ E HIIDL++T+ L++A +V+ Sbjct: 147 ELSIAKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNKTLSHLKRAAKVVEGIAE 206 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILF+ T+ + EAAKR+ Y V+S+W+ G +TN +S ++ + +++ Sbjct: 207 RGGIILFLGTRQGQKRGLEEAAKRTHGYYVSSRWIPGTLTNPTEIS-NVWERHEVDFFDT 265 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + T+ E+++I + PDL+ V++ + A+ EA + R+P Sbjct: 266 PTGRELTQNEQISIVK------------------PDLLVVLNPTENRNALNEAMQARVPT 307 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DT+S P V Y IPGNDDS RS+ L ++A A G+ Sbjct: 308 IGIIDTDSEPSFVTYPIPGNDDSLRSVNLILGVLAKAGERGL 349 >gi|41058651|gb|AAR99312.1| ribosomal protein subunit B [Candidatus Blochmannia novaeboracensis] Length = 152 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/154 (47%), Positives = 98/154 (63%), Gaps = 5/154 (3%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN IIDL T M +KAL ++ A G+ILFV TK AS+ V + A Q Sbjct: 1 FIFGVRNKXXIIDLEITSVMFRKALIELNKIAALKGKILFVGTKRAASESVKKTALACNQ 60 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKLKRA 148 + VN +WLGGM+TNWKTV QSI++L+DLE + ++ F TKKE L + R+ L+ + Sbjct: 61 FFVNHRWLGGMLTNWKTVRQSIKRLKDLE--IQSQDGTFKKLTKKEALILNRELINLENS 118 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L GI++MGGLPD +F V E +AI+EA RL I Sbjct: 119 LGGIKNMGGLPDAIFAVGATHEHIAIKEANRLGI 152 >gi|83745353|gb|ABC42388.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 9/192 (4%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKKWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 +D V EAA ++ + VN KW GG++TNW S + ++L+ L KE +G KK Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTNW---SITEERLKYFNYLRVKEIKGGFDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTN 191 + ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+ Sbjct: 118 DAAVVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEECKALQECITLGIPTISLIDTD 177 Query: 192 SNPDLVDYVIPG 203 S+PDL D IP Sbjct: 178 SDPDLADSSIPA 189 >gi|41058655|gb|AAR99314.1| ribosomal protein subunit B [Candidatus Blochmannia nearcticus] Length = 151 Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 3/148 (2%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN HII+L T+ M +KAL ++ + G+ILFV TK AS+ + + A Q Sbjct: 3 FIFGXRNKIHIINLETTIIMFKKALTELNKIASLKGKILFVGTKRAASESIKKTAIICNQ 62 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN--QGFTKKERLNIERKRDKLKRAL 149 + VN +WLGGM+TNWKTV QSI++L+DL E+ +K+ + TKKE L + R+ L+ +L Sbjct: 63 FFVNHRWLGGMLTNWKTVRQSIKRLKDL-EIQSKDGTFKKLTKKEALILNRELINLENSL 121 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEA 177 GI++MGGLPD +F V + E +AI+EA Sbjct: 122 GGIKNMGGLPDAIFAVGSAHEYIAIKEA 149 >gi|83745408|gb|ABC42413.1| ribosomal protein subunit 2 [Phelipanche tunetana] Length = 187 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGRQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL-EELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+L E + KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRNLIIEQKAERLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ + D + + A+ E L IP + ++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIIRDQDEDFTALHECLNLGIPTICLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|167515424|ref|XP_001742053.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778677|gb|EDQ92291.1| predicted protein [Monosiga brevicollis MX1] Length = 233 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 35/223 (15%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI +L ++ V GH+ +WNPKME YI+ ++HIIDL+ T L+ AL++ A Sbjct: 36 RVTIDELFDARVHLGHKRGMWNPKMEPYIYTTLADSHIIDLNVTKAHLEHALELTRRISA 95 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG +LFV + Q + A+R +Y V KW+GG +TN Sbjct: 96 DGGVVLFVGGRPQFEGLIRHEARRCGEYFVTRKWIGGTLTN------------------- 136 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGL--PDLMFVVDTNREKLAIQEARRLRI 182 N E + R + G++ +GGL PDL+ K+ ++EA I Sbjct: 137 ------------NTEARTS--HRLVHGVQTLGGLRMPDLILFFCVPVSKVGVKEALDCDI 182 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P V ++DT+ +PD V YV+PGNDD++++I + A A + G Sbjct: 183 PSVGIIDTDGDPDGVTYVVPGNDDTTQAIEFYVRKFADAVLAG 225 >gi|195928791|gb|ACG56075.1| ribosomal protein subunit 2 [Agalinis setacea] Length = 162 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 96/157 (61%), Gaps = 2/157 (1%) Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 ++ D + G + L V TK +A+ V AA ++ +CVN KWLGGM+TNW T +QK R Sbjct: 1 LVFDAASSGKQFLIVCTKKKAAHFVARAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFR 60 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 DL + ++ K++ ++R+ +L+R L GI+ M GLPD++ +VD + E A++E Sbjct: 61 DLR--MEQKTGRLPKRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIIVDQHEEYTALREC 118 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 L IP + ++DTN +PDL D IP NDDS SI L Sbjct: 119 ITLGIPTICLIDTNCDPDLADLPIPANDDSISSIRLI 155 >gi|41058627|gb|AAR99300.1| ribosomal protein subunit B [Candidatus Blochmannia sansabeanus] Length = 151 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN HII+L T+ M ++AL ++ + G+ILFV TK AS+ + + A Q Sbjct: 3 FIFGVRNKIHIINLETTILMFKQALVELNKIASLKGKILFVGTKRAASEAIKKTALACNQ 62 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALD 150 + VN +WLGGM+TNWKTV QSI++L+DLE + + + TKKE L + R+ L+ +L Sbjct: 63 FFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFKKLTKKEALILNRELINLENSLG 122 Query: 151 GIRDMGGLPDLMFVVDTNREKLAIQEA 177 GI++MGGLPD +F V E +AI+EA Sbjct: 123 GIKNMGGLPDAIFAVGATHEHIAIKEA 149 >gi|41058653|gb|AAR99313.1| ribosomal protein subunit B [Candidatus Blochmannia americanus] Length = 147 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/145 (46%), Positives = 95/145 (65%), Gaps = 1/145 (0%) Query: 34 FCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYC 93 F RN HIIDL T+ M ++AL ++ + G+ILFV TK AS+ V + A Q+ Sbjct: 1 FGVRNKIHIIDLETTILMFKQALIELNKIASLKGKILFVGTKRAASEAVKKTALACNQFF 60 Query: 94 VNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGI 152 VN++WLGGM+TNWKTV QSI++L+DLE + + Q TKKE L + R+ L+ +L GI Sbjct: 61 VNNRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFQKLTKKEALILNRELINLENSLGGI 120 Query: 153 RDMGGLPDLMFVVDTNREKLAIQEA 177 ++MGGLPD +F V E +AI+EA Sbjct: 121 KNMGGLPDAIFAVGATHEDIAIKEA 145 >gi|163791109|ref|ZP_02185529.1| 30S ribosomal protein S2 [Carnobacterium sp. AT7] gi|159873665|gb|EDP67749.1| 30S ribosomal protein S2 [Carnobacterium sp. AT7] Length = 150 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/148 (42%), Positives = 96/148 (64%), Gaps = 5/148 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + A + + G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLADTAYNYMKEVSENG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I++L+ + ++ +E Sbjct: 65 GIALFVGTKKQAQEAIKDEATRAGQYFVNHRWLGGTLTNWDTIQKRIKRLKAINKM--EE 122 Query: 127 NQGF---TKKERLNIERKRDKLKRALDG 151 + F KKE + ++RD+L++ L G Sbjct: 123 DGTFDVLPKKEVGILIKQRDRLEKFLGG 150 >gi|195928695|gb|ACG56027.1| ribosomal protein subunit 2 [Agalinis calycina] Length = 168 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 3/163 (1%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +A ++ D + G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T + Sbjct: 1 EACDLVFDAASSGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRL 60 Query: 114 QKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREK 171 QK RDL E+ + N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + E Sbjct: 61 QKFRDLRMEQKTGRLNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEY 119 Query: 172 LAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 A++E L IP + ++DTN +PDL D IP NDD+ SI L Sbjct: 120 TALRECITLGIPTICLIDTNCDPDLADISIPANDDAISSIRLI 162 >gi|260940679|ref|XP_002614639.1| hypothetical protein CLUG_05417 [Clavispora lusitaniae ATCC 42720] gi|238851825|gb|EEQ41289.1| hypothetical protein CLUG_05417 [Clavispora lusitaniae ATCC 42720] Length = 442 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 124/232 (53%), Gaps = 19/232 (8%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 +++ TI L+ +G GH +W P + +I+ E H+IDL++T+ L++A +VI Sbjct: 217 LSMDDVTISSLMAAGCHLGHAKAMWRPSTQPFIYAEYQGIHLIDLNETLAALRRATKVIE 276 Query: 61 DTVARGGRILFVATKS--QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 A+GG IL+V T + + EAAKRS Y V+ +W+ G +TN+ VS+ I + Sbjct: 277 SIAAKGGVILYVGTSRNWEQHRALEEAAKRSRGYYVSHRWIPGTITNFTEVSKQIGGHQK 336 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E L G T R NI + D L + PDL+ +++ + + E Sbjct: 337 IEVDL-----GDTPTNR-NISAQDDALIK-----------PDLVVLLNPVENRNCVNECI 379 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 + RIP + + DT+ P L+ Y IP NDDS R+ ++ C +++ AA G+ R++ Sbjct: 380 KSRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSVVCGILSKAAEQGVERRY 431 >gi|323354762|gb|EGA86596.1| Mrp4p [Saccharomyces cerevisiae VL3] Length = 240 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 120/225 (53%), Gaps = 20/225 (8%) Query: 3 LPQ-FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP+ T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 25 LPENITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEG 84 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN S I + + +E Sbjct: 85 VSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTN----STEISGIWEKQE 140 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +N + L+ ++K PDL+ V++ + A+ EA + R Sbjct: 141 IDSNDNP---TERALSPNETSKQVK------------PDLLVVLNPTENRNALLEAIKSR 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +P +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ Sbjct: 186 VPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGL 230 >gi|256561161|gb|ACU83660.1| ribosomal protein subunit 2 [Euphrasia transmorrisonensis var. durietziana] Length = 162 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 100/159 (62%), Gaps = 3/159 (1%) Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K R Sbjct: 2 LVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFR 61 Query: 118 DL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 DL E+ + + N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 62 DLRMEQKMGRLNR-LPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 E L IP + ++DTN +P+L D IP NDD+ SI L Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLI 159 >gi|256561163|gb|ACU83661.1| ribosomal protein subunit 2 [Euphrasia philippinensis] gi|256561165|gb|ACU83662.1| ribosomal protein subunit 2 [Euphrasia transmorrisonensis] gi|256561167|gb|ACU83663.1| ribosomal protein subunit 2 [Euphrasia transmorrisonensis var. durietziana] gi|256561169|gb|ACU83664.1| ribosomal protein subunit 2 [Euphrasia nankotaizanensis] gi|256561171|gb|ACU83665.1| ribosomal protein subunit 2 [Euphrasia tarokoana] Length = 162 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 100/159 (62%), Gaps = 3/159 (1%) Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K R Sbjct: 2 LVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFR 61 Query: 118 DL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 DL E+ + + N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 62 DLRMEQKMGRLNR-LPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 E L IP + ++DTN +P+L D IP NDD+ SI L Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLI 159 >gi|207344804|gb|EDZ71820.1| YHL004Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 394 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 22/226 (9%) Query: 3 LPQ-FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP+ T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 179 LPENITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEG 238 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S Sbjct: 239 VSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS----------- 287 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRL 180 G +K+ I+ + +RAL + PDL+ V++ + A+ EA + Sbjct: 288 -------GIWEKQE--IDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKS 338 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 R+P +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ Sbjct: 339 RVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGL 384 >gi|151943936|gb|EDN62229.1| mitochondrial ribosomal small subunit component [Saccharomyces cerevisiae YJM789] gi|323333319|gb|EGA74716.1| Mrp4p [Saccharomyces cerevisiae AWRI796] Length = 394 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 22/226 (9%) Query: 3 LPQ-FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP+ T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 179 LPENITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEG 238 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S Sbjct: 239 VSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS----------- 287 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRL 180 G +K+ I+ + +RAL + PDL+ V++ + A+ EA + Sbjct: 288 -------GIWEKQE--IDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKS 338 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 R+P +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ Sbjct: 339 RVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGL 384 >gi|328352590|emb|CCA38988.1| 37S ribosomal protein MRP4, mitochondrial [Pichia pastoris CBS 7435] Length = 380 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 21/226 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I+ LL +GV GH L+ P + +I+ E HIIDL QT+ L++A +V+ Sbjct: 164 ELSIKTLLAAGVHLGHSTSLYRPSTQPFIYGEYKGLHIIDLEQTLIYLKRASKVVQGVAE 223 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELL 123 +GG ILF+ T+ + EAA R Y V+S+W+ G +TN +S + Q+ DLE+ Sbjct: 224 KGGLILFLGTRDGQRRSLEEAASRVKGYFVSSRWIPGTLTNCTEISGTWQRHEVDLEDTP 283 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N + D+L + PDL+ +++ + A++EA R+P Sbjct: 284 TGRNL------------EGDELSSLVK--------PDLIVILNPVENRNALKEAMYARVP 323 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+S P LV Y +PGNDDS+RS L +++ A G R+ Sbjct: 324 TIGIVDTDSEPSLVTYPVPGNDDSNRSTDLILGVLSKAGELGRRRR 369 >gi|6321782|ref|NP_011859.1| Mrp4p [Saccharomyces cerevisiae S288c] gi|417730|sp|P32902|RT04_YEAST RecName: Full=37S ribosomal protein MRP4, mitochondrial; Flags: Precursor gi|171982|gb|AAA34793.1| ribosomal protein [Saccharomyces cerevisiae] gi|500819|gb|AAB68428.1| Mrp4p: Mitochondrial ribosomal protein [Saccharomyces cerevisiae] gi|45270660|gb|AAS56711.1| YHL004W [Saccharomyces cerevisiae] gi|190405778|gb|EDV09045.1| mitochondrial ribosomal protein [Saccharomyces cerevisiae RM11-1a] gi|256269248|gb|EEU04571.1| Mrp4p [Saccharomyces cerevisiae JAY291] gi|259147022|emb|CAY80277.1| Mrp4p [Saccharomyces cerevisiae EC1118] gi|285809896|tpg|DAA06683.1| TPA: Mrp4p [Saccharomyces cerevisiae S288c] gi|323304711|gb|EGA58472.1| Mrp4p [Saccharomyces cerevisiae FostersB] gi|323308863|gb|EGA62099.1| Mrp4p [Saccharomyces cerevisiae FostersO] gi|323337412|gb|EGA78664.1| Mrp4p [Saccharomyces cerevisiae Vin13] Length = 394 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 22/226 (9%) Query: 3 LPQ-FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP+ T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 179 LPENITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEG 238 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S Sbjct: 239 VSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS----------- 287 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRL 180 G +K+ I+ + +RAL + PDL+ V++ + A+ EA + Sbjct: 288 -------GIWEKQE--IDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKS 338 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 R+P +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ Sbjct: 339 RVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGL 384 >gi|83745349|gb|ABC42386.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 118/192 (61%), Gaps = 9/192 (4%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKKWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 +D V EAA ++ + VN KW GG++TN +++++ ++L+ L KE +G KK Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTN-RSITE--ERLKYFNYLRVKEIKGGFDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTN 191 + ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+ Sbjct: 118 DAAVVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIPTISLIDTD 177 Query: 192 SNPDLVDYVIPG 203 S+PDL D IP Sbjct: 178 SDPDLADISIPA 189 >gi|254572573|ref|XP_002493396.1| hypothetical protein [Pichia pastoris GS115] gi|238033194|emb|CAY71217.1| Hypothetical protein PAS_c131_0005 [Pichia pastoris GS115] Length = 383 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 21/226 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I+ LL +GV GH L+ P + +I+ E HIIDL QT+ L++A +V+ Sbjct: 167 ELSIKTLLAAGVHLGHSTSLYRPSTQPFIYGEYKGLHIIDLEQTLIYLKRASKVVQGVAE 226 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELL 123 +GG ILF+ T+ + EAA R Y V+S+W+ G +TN +S + Q+ DLE+ Sbjct: 227 KGGLILFLGTRDGQRRSLEEAASRVKGYFVSSRWIPGTLTNCTEISGTWQRHEVDLEDTP 286 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N + D+L + PDL+ +++ + A++EA R+P Sbjct: 287 TGRNL------------EGDELSSLVK--------PDLIVILNPVENRNALKEAMYARVP 326 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+S P LV Y +PGNDDS+RS L +++ A G R+ Sbjct: 327 TIGIVDTDSEPSLVTYPVPGNDDSNRSTDLILGVLSKAGELGRRRR 372 >gi|323348399|gb|EGA82646.1| Mrp4p [Saccharomyces cerevisiae Lalvin QA23] Length = 394 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 22/226 (9%) Query: 3 LPQ-FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 LP+ T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 179 LPENITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEG 238 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S Sbjct: 239 VSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS----------- 287 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRL 180 G +K+ I+ + +RAL + PDL+ V++ + A+ EA + Sbjct: 288 -------GIWEKQE--IDSNDNPTERALSPNETSKQVKPDLLVVLNPTENRNALLEAIKS 338 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 R+P +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ Sbjct: 339 RVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGL 384 >gi|16603930|gb|AAL27211.1| ribosomal protein subunit 2 [Arctostaphylos manzanita] Length = 173 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 101/166 (60%), Gaps = 3/166 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADLVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + + K RDL E+ + + + K++ ++R+ L+ L GI+ M GLPD++ ++D + Sbjct: 61 KRLHKFRDLRMEQKMGRLER-LPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 +E A++E L IP + ++DTN +PDL+D IP NDD+ SI L Sbjct: 120 KEYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLI 165 >gi|16603934|gb|AAL27213.1| ribosomal protein subunit 2 [Comarostaphylis arbutoides] Length = 174 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 101/166 (60%), Gaps = 3/166 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADSVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + + K RDL E+ + + + K++ ++R+ L+ L GI+ M GLPD++ ++D + Sbjct: 61 KRLHKFRDLRMEQKMGRLER-LPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 +E A++E L IP + ++DTN +PDL+D IP NDD+ SI L Sbjct: 120 KEYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLI 165 >gi|83745412|gb|ABC42415.1| ribosomal protein subunit 2 [Phelipanche cf. tunetana Schonswetter & Tribsch 10691] Length = 187 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HIIDL++T L +A ++ ++G + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIIDLTKTARFLYEACNLLFYAASKGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW G +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTN++ Sbjct: 118 DAAVVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLIDTNAD 177 Query: 194 PDLVDYVIPG 203 PDL IP Sbjct: 178 PDLAHISIPA 187 >gi|16603932|gb|AAL27212.1| ribosomal protein subunit 2 [Arctostaphylos uva-ursi] Length = 173 Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 101/166 (60%), Gaps = 3/166 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADSVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + + K RDL E+ + + + K++ ++R+ L+ L GI+ M GLPD++ ++D + Sbjct: 61 KRLHKFRDLRMEQKMGRLER-LPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 +E A++E L IP + ++DTN +PDL+D IP NDD+ SI L Sbjct: 120 KEYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLI 165 >gi|254578042|ref|XP_002495007.1| ZYRO0B01254p [Zygosaccharomyces rouxii] gi|238937897|emb|CAR26074.1| ZYRO0B01254p [Zygosaccharomyces rouxii] Length = 399 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 119/221 (53%), Gaps = 19/221 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ +LLE+GV G +W P + +I+ E H+IDL++T+ L++A +V+ Sbjct: 185 KVSVNKLLEAGVHLGQSTSIWRPSTQPFIYGEYKGIHLIDLNKTLSSLKRAAKVVEGISE 244 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG IL+V T+ + EAAKR+ Y ++++W+ G +TN +S + + +++ Sbjct: 245 RGGVILYVGTREGQKRALEEAAKRTNGYYISTRWIPGTLTNSTEIS-GVWERHEVDFADK 303 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N+ T E I + PDL+ V++ + A++E+ + R+P Sbjct: 304 PTNRELTPAETSGICK------------------PDLIVVLNPTENRNALRESMQARVPT 345 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT+S P +V Y IPGNDDS RS+ L +++ A G Sbjct: 346 IGIIDTDSEPSMVTYPIPGNDDSLRSVNLILGVLSRAGQRG 386 >gi|16603928|gb|AAL27210.1| ribosomal protein subunit 2 [Arbutus menziesii] Length = 168 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 101/166 (60%), Gaps = 3/166 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADLVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + + K RDL E+ + + + K++ ++R+ L+ L GI+ M GLPD++ ++D + Sbjct: 61 KRLHKFRDLRMEQKMGRLER-LPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 +E A++E L IP + ++DTN +PDL+D IP NDD+ SI L Sbjct: 120 KEYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLI 165 >gi|302306542|ref|NP_982956.2| ABR010Cp [Ashbya gossypii ATCC 10895] gi|299788566|gb|AAS50780.2| ABR010Cp [Ashbya gossypii ATCC 10895] Length = 391 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 19/234 (8%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ + +I +L +GV G LW + YI+ HIIDL+QT+ L++A +V+ Sbjct: 174 AIEKLSISKLAAAGVHLGQSTSLWRSSTQPYIYGSYKGIHIIDLNQTLFHLKRAAKVVEG 233 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ + AA+R V SKW+ G +TN +S S+ +++ Sbjct: 234 VAENGGLILFLGTREGQKPALRRAAERVRGCYVASKWIPGTLTNPIEIS-SVWGRHEVDF 292 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + T++E ++I + PDL+ V++ + A++EA + R Sbjct: 293 EGNPTGRELTEEENISIIK------------------PDLIIVLNPTENRNALREAMQAR 334 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 +P + ++DT+S P +V Y +PGNDDS RS++L ++A A G+A + + A Sbjct: 335 VPTIGIIDTDSEPSMVTYPVPGNDDSLRSVSLLVSILAKAGERGLANRKEKLAA 388 >gi|256561159|gb|ACU83659.1| ribosomal protein subunit 2 [Euphrasia borneensis] gi|256561173|gb|ACU83666.1| ribosomal protein subunit 2 [Euphrasia hirtella] gi|256561175|gb|ACU83667.1| ribosomal protein subunit 2 [Euphrasia mirabilis] gi|256561177|gb|ACU83668.1| ribosomal protein subunit 2 [Euphrasia maximowiczii] gi|256561179|gb|ACU83669.1| ribosomal protein subunit 2 [Euphrasia picta] gi|256561185|gb|ACU83672.1| ribosomal protein subunit 2 [Euphrasia spectabilis] gi|256561187|gb|ACU83673.1| ribosomal protein subunit 2 [Euphrasia officinalis] Length = 162 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 3/159 (1%) Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K R Sbjct: 2 LVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFR 61 Query: 118 DL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 DL E+ + N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 62 DLRMEQKTGRLNR-LPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 E L IP + ++DTN +P+L D IP NDD+ SI L Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLI 159 >gi|297580904|ref|ZP_06942829.1| LOW QUALITY PROTEIN: ribosomal protein S2 [Vibrio cholerae RC385] gi|297534730|gb|EFH73566.1| LOW QUALITY PROTEIN: ribosomal protein S2 [Vibrio cholerae RC385] Length = 154 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/126 (50%), Positives = 89/126 (70%), Gaps = 1/126 (0%) Query: 101 GMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 G WKTV QSI++L++LE + + TKKE L R+ +KL+++L GI+DMGGLP Sbjct: 11 GWAVCWKTVRQSIKRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLP 70 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D +FV+D + E +AI+EA L IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A Sbjct: 71 DALFVIDADHEHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAA 130 Query: 220 SAAIDG 225 A +G Sbjct: 131 QAINEG 136 >gi|256561189|gb|ACU83674.1| ribosomal protein subunit 2 [Euphrasia petiolaris] Length = 162 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 3/159 (1%) Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K R Sbjct: 2 LVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFR 61 Query: 118 DL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 DL E+ + N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 62 DLRMEQKTGRLNR-LPKRDAAVVKRQLSHLQTYLGGIQYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 E L IP + ++DTN +P+L D IP NDD+ SI L Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLI 159 >gi|156353059|ref|XP_001622894.1| predicted protein [Nematostella vectensis] gi|156209527|gb|EDO30794.1| predicted protein [Nematostella vectensis] Length = 196 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 40/217 (18%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R L +GV +GH WNP M+ Y++ R + HIIDL+QT+ + AL V+ TV RG Sbjct: 14 SLRDLFVAGVHYGHHEGCWNPLMKPYLYGTREHFHIIDLNQTIKHFRLALDVLCHTVYRG 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G++LF++ K Q + A+ S +Y V +W GG TN S + + R+L +L+ Sbjct: 74 GKVLFISCKPQFEELTQSLARDSGEYFVTQRWRGGTFTN----SYMVLETRNLPDLVV-- 127 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + V R LA++E IP + Sbjct: 128 ----------------------------------FLHVPSLGRNALAVKETAMCNIPSIG 153 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VD++ NP+L+ Y IPGNDD ++ ++C + SA + Sbjct: 154 IVDSDCNPNLIMYPIPGNDDMPSAVQMYCRIFKSAVL 190 >gi|195928689|gb|ACG56024.1| ribosomal protein subunit 2 [Agalinis aphylla] Length = 172 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 99/166 (59%), Gaps = 3/166 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T Sbjct: 1 FLSEACGLVFHAARSGKQFLIVGTKKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 +QK RDL E+ + + N+ K++ ++R+ +L+ L GI+ M GLPD++ +VD + Sbjct: 61 TRLQKFRDLRMEQKMGRLNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 E A++E L IP + ++DTN +PDL D IP NDD+ SI L Sbjct: 120 EEYTALRECITLGIPTICLIDTNCDPDLADLSIPANDDARSSIRLI 165 >gi|165910473|gb|ABY73991.1| ribosomal protein S2 [Cuscuta nitida] Length = 177 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 106/179 (59%), Gaps = 5/179 (2%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI +R HI +L++T L +A ++ +RG + L V T ++A+D V A+ Sbjct: 1 MVPYISAKRKGIHITNLTRTARFLSQACDLVFHAASRGKKFLIVGTNNKAADSVARASIG 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG---FTKKERLNIERKRDKL 145 + + VN KWL GM+TNW T +QK RDL + ++ G TK+E ++R+ +L Sbjct: 61 ARCHYVNKKWLAGMLTNWSTTETRLQKFRDLR--IEQKRGGLDRLTKREATRLKRQLARL 118 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 + L GI+ M GLPD++ ++D +++ A++E R L IP + ++DTN +P+L D IP + Sbjct: 119 QTYLGGIQYMTGLPDIVIIIDQHKDYTALRECRILGIPTICLIDTNCDPNLSDISIPAH 177 >gi|165910491|gb|ABY74000.1| ribosomal protein S2 [Humbertia madagascariensis] Length = 173 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 105/172 (61%), Gaps = 3/172 (1%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI +R HI +L++T L + ++ D +RG + L V TK++A+D V A+ R Sbjct: 1 MAPYISAKRKGIHITNLTRTARFLSETCDLVFDAASRGKQFLIVGTKNKAADSVAWASIR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLK 146 + + VN KWLGGM+TNW T +QK RDL E+ + N+ K++ ++R+ +L+ Sbjct: 61 ARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKMGGLNR-LPKRDATMLKRQLARLQ 119 Query: 147 RALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVD 198 L GI+ M GLPD++ +VD ++E A++E L IP + ++DTN +P+L D Sbjct: 120 TYLGGIKYMTGLPDIVIIVDQHKEYTALRECITLGIPTICLIDTNCDPNLSD 171 >gi|195928799|gb|ACG56079.1| ribosomal protein subunit 2 [Agalinis skinneriana] Length = 171 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 3/162 (1%) Query: 52 LQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQ 111 L +A ++ +RG + L V TK +A+D V AA ++ +CV KWLGGM+TNW T Sbjct: 1 LSEACDLVCYAASRGKQFLIVGTKREAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTET 60 Query: 112 SIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 +QK RDL E+ + N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D + Sbjct: 61 RLQKFRDLRMEQKTGRLNR-LPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHE 119 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 E A++E L IP + ++DTN +PDL D IP NDD SI Sbjct: 120 EYTALRECITLGIPTICLIDTNCDPDLADISIPANDDGRSSI 161 >gi|83745406|gb|ABC42412.1| ribosomal protein subunit 2 [Phelipanche tunetana] Length = 187 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HII+L++T L +A ++ ++G + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASKGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW G +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTN++ Sbjct: 118 DAAVVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLIDTNAD 177 Query: 194 PDLVDYVIPG 203 PDL IP Sbjct: 178 PDLAHISIPA 187 >gi|16603936|gb|AAL27214.1| ribosomal protein subunit 2 [Gaultheria shallon] Length = 174 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 4/164 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDL---EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + ++K R+L E+ + + N+ K+ ++RK L+ L GI+ M GLPD++ ++D Sbjct: 61 RRLRKFRNLRRMEQKMGRRNR-LLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQ 119 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 120 HKEYTALRECIILGIPTVGLIDTNCDPDLVDFPIPANDDTRASI 163 >gi|83745402|gb|ABC42411.1| ribosomal protein subunit 2 [Phelipanche tunetana] Length = 187 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 7/190 (3%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + H IDL++T L +A ++ ++G + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHTIDLTKTARFLYEACNLLFYAASKGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKK 133 D V +AA ++ + VN KW G +TNW +QK R+ L+ ++ G KK Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKK 117 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTN++ Sbjct: 118 DAAVVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLIDTNAD 177 Query: 194 PDLVDYVIPG 203 PDL IP Sbjct: 178 PDLAHISIPA 187 >gi|16603952|gb|AAL27222.1| ribosomal protein subunit 2 [Rhododendron groenlandicum] Length = 172 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 96/161 (59%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D R RIL V TK + +D V +AA ++ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAARRRKRILIVGTKKRVADLVAQAAIKARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 + + K + L L + K++ ++RK L+ L GI+ M +PD++ ++D ++E Sbjct: 61 RRLCKFKKLRLELKMVRRNLLKRDAARLKRKLSHLQTYLGGIKYMTAIPDIVIIIDQHKE 120 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 A++E L IP + ++DTN +PDLVD+ IP NDD+ SI Sbjct: 121 YTALRECIILGIPTICLIDTNCDPDLVDFPIPANDDTRASI 161 >gi|256561181|gb|ACU83670.1| ribosomal protein subunit 2 [Euphrasia stricta] gi|256561183|gb|ACU83671.1| ribosomal protein subunit 2 [Euphrasia subarctica] Length = 155 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 96/153 (62%), Gaps = 3/153 (1%) Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EE 121 +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RDL E+ Sbjct: 1 SRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQ 60 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + N+ K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L Sbjct: 61 KTGRLNR-LPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLG 119 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 IP + ++DTN +P+L D IP NDD+ SI L Sbjct: 120 IPTICLIDTNCDPNLADISIPANDDAISSIRLI 152 >gi|115350015|ref|YP_764388.1| ribosomal protein S2 [Stigeoclonium helveticum] gi|122165159|sp|Q06SH8|RR2_STIHE RecName: Full=30S ribosomal protein S2, chloroplastic gi|98990229|gb|ABF60196.1| ribosomal protein S2 [Stigeoclonium helveticum] Length = 314 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 125/225 (55%), Gaps = 1/225 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P T + +L + FGH + M++YI + N H I+L +T ++KAL ++ Sbjct: 59 PIETYKIMLRKSLHFGHPVIQCDSGMKKYIRGQSNGKHFINLFRTKRYIRKALWYLTKYA 118 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-EL 122 + ILFV T ++ V A ++ + VN +WLGGM+ NWKT+ + +QKL+ L+ E Sbjct: 119 YKRKNILFVGTAIPSARYVATTALKTKSFFVNFRWLGGMLNNWKTLRKLLQKLKTLQKEQ 178 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 NK + KKE + +++ +L++ L GI+ + G P+++ + ++ A +E +++ I Sbjct: 179 KNKIWKNLPKKEGIARLKEKQRLEKYLKGIQMIKGFPEVVIMTSQTKDLSAARECKKMGI 238 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN +P L D ++P NDDS+ S+ A A G A Sbjct: 239 WNLSILDTNCDPRLADLMVPANDDSASSVKFLLFNFAKAIQAGRA 283 >gi|11467163|ref|NP_054464.1| ribosomal protein S2 [Marchantia polymorpha] gi|585954|sp|P26864|RT02_MARPO RecName: Full=Ribosomal protein S2, mitochondrial gi|250820|gb|AAB22412.1| ribosomal protein S2 [Marchantia polymorpha=liverwort, Peptide Mitochondrial, 237 aa] gi|786247|gb|AAC09461.1| rps2 [Marchantia polymorpha] Length = 237 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 122/221 (55%), Gaps = 10/221 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL + GHR + + Y++ RN IIDL +T+ L++ +I ++ Sbjct: 8 VIQKLLSTNAYLGHR--IPTSDFQGYLYGFRNEMAIIDLEKTLICLRRTCNLIGSIISAK 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +L V T + + + + AK++ Q +N KW+GG +TNWK + + + +D N + Sbjct: 66 GHLLLVNTNPEYNKIIQQMAKKTNQSYINHKWIGGFLTNWKHMKKVKKHFQDFSAHPNLK 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + FT R + K+++ +GI +PD + +++ N+ +AI EA +L+IPIVA Sbjct: 126 D-AFTSSPFDYFPRFK-KMQKCFEGIMT-HNIPDCLVIINANQNSMAILEANQLQIPIVA 182 Query: 187 VVDTNSNPD----LVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VD+N P+ L+ Y +P NDDS + + LFC+L+ I Sbjct: 183 LVDSNI-PNRLHKLITYPVPVNDDSIKFVYLFCNLITKTVI 222 >gi|41058657|gb|AAR99315.1| ribosomal protein subunit B [Candidatus Blochmannia floridanus] Length = 151 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 66/153 (43%), Positives = 91/153 (59%), Gaps = 7/153 (4%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN HII+L +T+ M AL + G+ILFV TK + + A Q Sbjct: 2 FIFGIRNKIHIINLDKTIVMFSNALVELKKIALAKGKILFVGTKRATRESIKSTALICGQ 61 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIERKRDKLKR 147 + VN +WLGGM+TNWKTV QSI++L+DLE N+ G TKKE L + R+ L+ Sbjct: 62 FFVNYRWLGGMLTNWKTVRQSIKRLKDLE---NQSQDGTFDKLTKKEVLILNRELISLEN 118 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L GI++MGGLPD +F +E +AI+EA L Sbjct: 119 SLGGIKNMGGLPDALFTAGAEQEHIAIKEANSL 151 >gi|16603908|gb|AAL27200.1| ribosomal protein subunit 2 [Hemitomes congestum] Length = 161 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 98/164 (59%), Gaps = 7/164 (4%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG + L V TK +D V AA ++ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLIFDAASRGNQFLIVGTKEGVADLVARAAIKARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + + K RDL+ K+ G TK + ++R+ L+ L G++ M LPD++ ++D Sbjct: 61 KRLHKFRDLKI---KQKMGRLKHLTKGDTTKLKRQLSHLQAYLGGVKYMKRLPDIVIILD 117 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 ++E +A++E L IP + ++DTN +PDLVD+ IP NDD+ S Sbjct: 118 QHKEYIALRECITLGIPTICLIDTNCDPDLVDFPIPANDDARSS 161 >gi|147794704|emb|CAN73505.1| hypothetical protein VITISV_036349 [Vitis vinifera] Length = 194 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 8/177 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAA-KRSAQYC----VNSKWLGGMMTNWKTVSQSIQKLRDL--E 120 + L V TK++A+D V AA K Y VN KWLGGM TNW T + K RDL E Sbjct: 70 QFLIVGTKNKAADSVARAAIKARCHYARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRTE 129 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + + N+ K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E Sbjct: 130 QKTGRLNR-LPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALREC 185 >gi|326437226|gb|EGD82796.1| hypothetical protein PTSG_03446 [Salpingoeca sp. ATCC 50818] Length = 366 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 43/222 (19%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++ L+++ V GH + + NPKM+ +I+ +R+ ++DL +TVP+LQ+AL + + +R Sbjct: 53 FSMEDLVQARVHLGHTHGVNNPKMDDFIYEKRHGLTVLDLDKTVPLLQRALDITREIASR 112 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A +Y V+ KW+GG +TN Sbjct: 113 GGVILFVSNRPQFETMVRRTATSCGEYFVSKKWVGGCLTN-------------------- 152 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 R L G++ LPDL+ + A++E R IP V Sbjct: 153 -------------------TYRVLGGMQ----LPDLVLFFSLPVNQAALKEVRDCMIPCV 189 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +P VDY +P NDDS S+ L DL A A +G A Sbjct: 190 GLVDTDCDPSSVDYPVPANDDSETSVNLMLDLFAGAVNEGKA 231 >gi|16603950|gb|AAL27221.1| ribosomal protein subunit 2 [Rhododendron arboreum] Length = 170 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 93/157 (59%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A ++ D R RIL V TK + +D V AA ++ + VN KWLGGM+TNW T + + Sbjct: 3 ACDLVFDAARRRKRILIVGTKKRVADLVARAAIKARCHYVNKKWLGGMLTNWSTTERRLC 62 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 K + L L + K++ ++RK L+ L GI+ M +PD++ ++D ++E A+ Sbjct: 63 KFKKLRLELKMVRRNLLKRDAARLKRKLSHLQTYLGGIKYMTAIPDIVIIIDQHKEYTAL 122 Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 +E L IP + ++DTN +PDLVD+ IP NDD+ SI Sbjct: 123 RECIILGIPTICLIDTNCDPDLVDFPIPANDDTRASI 159 >gi|195928705|gb|ACG56032.1| ribosomal protein subunit 2 [Agalinis decemloba] Length = 168 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 3/160 (1%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +A ++ + G + L V T+ A+D V AA ++ +CV KWLGGM+TNW T + Sbjct: 1 EACDLVCYAASGGKQFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRL 60 Query: 114 QKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREK 171 QK RDL E+ + N+ K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E Sbjct: 61 QKFRDLRMEQKTGRLNRR-PKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEY 119 Query: 172 LAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 A+QE L IP + ++DTN +PDL D IP NDD SI Sbjct: 120 TALQECITLGIPTICLIDTNCDPDLADISIPANDDGRSSI 159 >gi|16603948|gb|AAL27220.1| ribosomal protein subunit 2 [Oxydendrum arboreum] Length = 174 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 2/163 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLFFDAASRGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R L + K +G K++ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRKLRRMEQKMGRGNRLLKRDAARLKRKLSHLQAYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 +E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 121 KEYTALRECIILGIPTVCLIDTNCDPDLVDFPIPANDDTRASI 163 >gi|50423181|ref|XP_460171.1| DEHA2E19910p [Debaryomyces hansenii CBS767] gi|49655839|emb|CAG88444.1| DEHA2E19910p [Debaryomyces hansenii] Length = 468 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 22/229 (9%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 ++ + TI L+ +G GH +W P + YI+ E N H+IDL++T+ L +A QVI Sbjct: 220 SISETTISTLMAAGCHLGHAKAMWRPSTQPYIYGEYNGIHLIDLNETLSALNRATQVIKG 279 Query: 62 TVARGGRILFVATKS--QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 A+GG IL+V T + + EAAKR+ Y V+ +W+ G +TN+ V++ I Sbjct: 280 VAAKGGVILYVGTTKNWEQHRALEEAAKRTRGYYVSKRWVPGTITNFTEVTKQI------ 333 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL--PDLMFVVDTNREKLAIQEA 177 R+ ++ R L G G L PDL+ +++ + I E Sbjct: 334 -----------GGSSRIEVDMMDQPTDRKL-GEETSGNLIKPDLIVLLNPVENRNCINEC 381 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + RIP + + DT+ P L+ Y IP NDDS R+ +L +++ +A +G+ Sbjct: 382 IKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLMTGILSKSAEEGL 430 >gi|304322965|ref|YP_003795483.1| ribosomal protein S2 [Floydiella terrestris] gi|270048164|gb|ACZ58459.1| ribosomal protein S2 [Floydiella terrestris] Length = 315 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 121/222 (54%), Gaps = 5/222 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T +++L+ V +G + NP+M+++ + I L QT L +AL +++ + Sbjct: 64 TYKEMLKRNVHYGDKTVTCNPEMKKFTRGKDRGNSFISLFQTRRYLIRALWLLTKYAYQK 123 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV T +S V AA + + VN +WLGGM+TNWKT+ + I+KL+ +L ++ Sbjct: 124 RPMLFVGTSRPSSRPVATAALNTKSFFVNVRWLGGMLTNWKTMRKLIKKLKKFTKL--RQ 181 Query: 127 NQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE +++ +L++ L G++ + P ++ + +EK A E +++ I Sbjct: 182 KKAFLNSPKKEIAARKKEIQRLEKYLKGLKMLRTFPQVVIMASQKKEKSAALECQKMGIF 241 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + + DT+ NP L D++IP NDDSS SI A A + G Sbjct: 242 NMTIADTDCNPKLADFIIPANDDSSTSIKFLLFYFAKAILIG 283 >gi|73543645|gb|AAZ77895.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKE 134 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKE 135 >gi|332140469|ref|YP_004426207.1| ribosomal protein S2 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550491|gb|AEA97209.1| ribosomal protein S2 [Alteromonas macleodii str. 'Deep ecotype'] Length = 213 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 56/96 (58%), Positives = 73/96 (76%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L ++R+ DKL+ +L GI+DMGGLPD +FV+D + E +A+ EAR L IP+V VVD Sbjct: 99 LTKKEALMLQREMDKLENSLGGIKDMGGLPDAIFVIDADHEHIAVTEARNLGIPVVGVVD 158 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 TNSNPD VDY+IPGNDD+ R+I L+ D A+A G Sbjct: 159 TNSNPDGVDYIIPGNDDAIRAIQLYLDAAANAINSG 194 >gi|73543665|gb|AAZ77905.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543667|gb|AAZ77906.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 86/135 (63%), Gaps = 1/135 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIDQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKE 134 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKE 135 >gi|315929213|gb|EFV08434.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 305] Length = 142 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 7/140 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 3 SMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEG 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ E Sbjct: 63 KTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKM---E 119 Query: 127 NQG----FTKKERLNIERKR 142 G TKKE L + RK+ Sbjct: 120 EDGSIKLLTKKEALMLTRKK 139 >gi|16603903|gb|AAL27198.1| ribosomal protein subunit 2 [Monotropa hypopitys] gi|16603905|gb|AAL27199.1| ribosomal protein subunit 2 [Monotropa hypopitys] Length = 161 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 98/162 (60%), Gaps = 3/162 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG R L V TK + + V AA R+ + VN K LGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGNRFLIVGTKKRVASLVARAAIRARCHYVNKKRLGGMLTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + + K RDL E+ + + + K++ ++R+ L+ L GI+ M GLPD++ ++D + Sbjct: 61 KRLHKFRDLRMEQKMGRLER-LPKRDAARLKRQLAHLQAYLGGIKYMTGLPDIVIILDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 +E +A++E L IP + ++DTN +PDLVD IP NDD+ S Sbjct: 120 KEYMALRECITLGIPTICLIDTNCDPDLVDLPIPANDDNRSS 161 >gi|196000004|ref|XP_002109870.1| hypothetical protein TRIADDRAFT_21033 [Trichoplax adhaerens] gi|190587994|gb|EDV28036.1| hypothetical protein TRIADDRAFT_21033 [Trichoplax adhaerens] Length = 242 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 45/240 (18%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++I+ L ++GV GH+ +WNP M++YI+ +R+ HIIDL++T L AL V S R Sbjct: 35 YSIKSLFDAGVHLGHKTGVWNPLMKQYIYGDRHGNHIIDLNETDRHLFLALNVTSHIAYR 94 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV + Q V + A+ ++ V +W GG++TN Sbjct: 95 KGVILFVCCRPQFQHLVQKTARECQEFFVIQRWRGGILTN-------------------- 134 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + L + R LPDL+ + AI+E+ + IP + Sbjct: 135 ------AHKLLPVPR-----------------LPDLIIFLSVPYNMDAIRESAQANIPSI 171 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQH-SYMGADTKSAGET 243 +VDT+ NP+L+ Y I GNDDS S+ L+C L ++A ++ + RQ+ D + GET Sbjct: 172 GIVDTDCNPNLITYPIAGNDDSLSSLELYCRLFSTAILNAKVQRQNDDNYTIDKSNDGET 231 >gi|16603946|gb|AAL27219.1| ribosomal protein subunit 2 [Pieris phillyreifolia] Length = 174 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 101/164 (61%), Gaps = 4/164 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV- 109 L +A + D +RG + L V TK + +D V AA R+ + V KWLGGM+TNW T Sbjct: 1 FLSEACDLFFDAASRGKQFLIVGTKERVADSVARAAIRARCHYVTKKWLGGMLTNWSTTE 60 Query: 110 --SQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + +KLR +E+ + + N+ K++ ++RK L+ L GI+ M GLPD++ ++D Sbjct: 61 RRLRKFRKLRRMEQKMGRRNR-LLKRDAARLKRKLSHLQAYLGGIKYMTGLPDIVIIIDQ 119 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++E A++E L IP V+++DTN +PDLVD+ IP NDD+ SI Sbjct: 120 HKEYTALRECIILGIPTVSLIDTNCDPDLVDFPIPANDDTRASI 163 >gi|38638298|ref|NP_943699.1| ribosomal protein S2 [Chara vulgaris] gi|32966612|gb|AAP92195.1| ribosomal protein S2 [Chara vulgaris] Length = 225 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 9/216 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL + FG+R + Y++ RN IIDL +T+ L++A I + Sbjct: 7 VIQRLLSTKAHFGNRT--PTSDFQPYLYGLRNEIAIIDLERTLLYLRRACNFIEYIIRSN 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T Q + + + AK + Q +N KW+GG +TNWK + + E L K Sbjct: 65 GHILFVNTNPQNNQIIQKMAKETCQSYINHKWIGGFLTNWKHIFHVQAHFQHFENLSLK- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + + + K+K+ +GI +PD + +++ N+ +AI EA +L IPIV Sbjct: 124 --ALDTAQHIRKVPRYKKMKKCFEGIVT-NDIPDCLVIMNANQNSMAILEASQLHIPIVC 180 Query: 187 VVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVA 219 ++D++ L + Y IP NDDS I LFC L+ Sbjct: 181 LIDSDIPSKLQQRIHYPIPVNDDSLEFIYLFCHLIT 216 >gi|212528244|ref|XP_002144279.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] gi|210073677|gb|EEA27764.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] Length = 270 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 16/223 (7%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 31 EVTLELLLASQTHLGHTTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVAR 90 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RGG ILFV T+ +CV+ AA+ + Y V +W+ G +TN + Q L + E +++ Sbjct: 91 RGGLILFVGTRPGQKECVVRAAEMTKGYHVFERWIPGSLTNGQ------QILGNCEIKVV 144 Query: 124 NKENQGFTK-KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N +Q T K+ ++ D + L PDL+ ++ ++ + E I Sbjct: 145 NALDQELTDYKQYISTTTNADAARPVLK--------PDLVICLNPVENEVLLHECGIHNI 196 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + V+DT+++P V Y IP NDDS RS+ L + A +G Sbjct: 197 PTIGVIDTDADPTRVTYPIPANDDSLRSVQLIAGALGRAGEEG 239 >gi|73543663|gb|AAZ77904.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 83/130 (63%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I T+ Sbjct: 6 KLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCIQKTIE 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 66 QERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLE 125 Query: 125 KENQGFTKKE 134 N G TKKE Sbjct: 126 ASNSGLTKKE 135 >gi|67968290|dbj|BAE00190.1| ribosomal protein S2 [Selaginella uncinata] Length = 228 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 101/216 (46%), Gaps = 7/216 (3%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E G GH+ WNPKM + ER H +D +QT + +A ++ +G + Sbjct: 15 EVGAHSGHQARRWNPKMAPHTSTEREGIHTLDPTQTARLSPEARDPVASAAGKGKQFPIA 74 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE---ELLNKENQG 129 TK QA+D V AA R+ + N K LGG TN T Q+L D E E L+ ++G Sbjct: 75 GTKYQAADVVQSAATRAQCHYANEKRLGGTPTNRSTTETRPQRLEDSEGKAERLHNSSEG 134 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 + R+ +L+R G R LPD+ +D +E +A +E P +VD Sbjct: 135 RA----ATLGRQSAQLRRDPGGTRYTKSLPDIATTIDQRKEPIATRECTAPGTPTTCLVD 190 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 T+ +PDL D IP NDD I + +A +G Sbjct: 191 TDCDPDLTDIPIPANDDPRAPIRRIPNKPTTAIREG 226 >gi|73543627|gb|AAZ77886.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543629|gb|AAZ77887.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543633|gb|AAZ77889.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543635|gb|AAZ77890.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543637|gb|AAZ77891.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543639|gb|AAZ77892.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543655|gb|AAZ77900.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKE 134 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKE 135 >gi|260828589|ref|XP_002609245.1| hypothetical protein BRAFLDRAFT_86845 [Branchiostoma floridae] gi|229294601|gb|EEN65255.1| hypothetical protein BRAFLDRAFT_86845 [Branchiostoma floridae] Length = 283 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 103/228 (45%), Gaps = 46/228 (20%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT R L + V GH+ W+ M YIF R HIIDL QTV +L +AL + R Sbjct: 78 FTQRDLFRANVHVGHKEGAWDRNMYPYIFGTRLGVHIIDLDQTVELLTRALNFTAHMAYR 137 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LF++ Q + + AK +Y W GGM TN T+ Sbjct: 138 KAIVLFISRHRQFTHLIENTAKDCGEYAHTRYWQGGMFTN-ATLQYG------------- 183 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLR 181 +G+R LP+L+ + T +AI++A +L Sbjct: 184 ------------------------EGVR----LPELVIFLHTLNNVFESHVAIRDAAKLN 215 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP V +VDTN NP+L+ Y +PGNDDS ++ L+C L A + G A++ Sbjct: 216 IPTVGIVDTNCNPNLITYPVPGNDDSPEAVELYCRLFKEAILKGKAKR 263 >gi|73543647|gb|AAZ77896.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKE 134 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKE 135 >gi|19114947|ref|NP_594035.1| mitochondrial ribosomal protein subunit S2 [Schizosaccharomyces pombe 972h-] gi|74654579|sp|O13970|RT04_SCHPO RecName: Full=40S ribosomal protein mrp4, mitochondrial; Flags: Precursor gi|4038620|emb|CAB11267.1| mitochondrial ribosomal protein subunit S2 [Schizosaccharomyces pombe] Length = 263 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 21/208 (10%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 G GH +WNP + +I+ +R HII L QT+ L++A+ V+ G ILF+ T Sbjct: 57 GAHLGHSTSIWNPYTQPFIYGKREGIHIISLDQTMVYLRRAISVVRSIAKENGIILFIGT 116 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKE 134 ++ D V+ AAKR+ Y + +WL G++TN + V + +L K+N+G + Sbjct: 117 RNGQKDSVVAAAKRARGYHIFDRWLPGLLTNAREVQGKLGG-----SILCKDNRG----K 167 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 + ++K + PDLM +++ K A EA++ +P + ++DT+++P Sbjct: 168 LIQTDKKPSYV------------FPDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADP 215 Query: 195 DLVDYVIPGNDDSSRSIALFCDLVASAA 222 +V Y IP NDDS R L L++ A Sbjct: 216 RMVTYPIPANDDSLRCTDLIAGLLSRVA 243 >gi|212528242|ref|XP_002144278.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] gi|210073676|gb|EEA27763.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] Length = 358 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 16/223 (7%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 119 EVTLELLLASQTHLGHTTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVAR 178 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RGG ILFV T+ +CV+ AA+ + Y V +W+ G +TN + Q L + E +++ Sbjct: 179 RGGLILFVGTRPGQKECVVRAAEMTKGYHVFERWIPGSLTNGQ------QILGNCEIKVV 232 Query: 124 NKENQGFTK-KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N +Q T K+ ++ D + L PDL+ ++ ++ + E I Sbjct: 233 NALDQELTDYKQYISTTTNADAARPVLK--------PDLVICLNPVENEVLLHECGIHNI 284 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + V+DT+++P V Y IP NDDS RS+ L + A +G Sbjct: 285 PTIGVIDTDADPTRVTYPIPANDDSLRSVQLIAGALGRAGEEG 327 >gi|73543641|gb|AAZ77893.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543649|gb|AAZ77897.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543651|gb|AAZ77898.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543653|gb|AAZ77899.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543659|gb|AAZ77902.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543661|gb|AAZ77903.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/129 (43%), Positives = 82/129 (63%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I T+ + Sbjct: 7 LTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACIQTTIGQ 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 67 EKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLEA 126 Query: 126 ENQGFTKKE 134 N G TKKE Sbjct: 127 SNSGLTKKE 135 >gi|16603910|gb|AAL27201.1| ribosomal protein subunit 2 [Monotropa hypopitys] gi|16603912|gb|AAL27202.1| ribosomal protein subunit 2 [Monotropa hypopitys] gi|16603914|gb|AAL27203.1| ribosomal protein subunit 2 [Monotropa hypopitys] Length = 161 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 7/164 (4%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG + L V TK + +D V AA ++ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGNQFLIVGTKKEFADLVSRAAIKARCHYVNKKWLGGMLTNWSTTK 60 Query: 111 QSIQKLRDLEELLNKENQG----FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + + KLRDL+ K G K++ ++R+ L+ L GI+ M LPD++ ++D Sbjct: 61 KELHKLRDLK---IKHKMGRLKQLKKRDVTGLKRQLAHLQEYLGGIKYMTRLPDIVIILD 117 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 ++E +++ E L IP + ++DTN +PD VD IP NDD+ S Sbjct: 118 QHKEYISLLECITLGIPTICLIDTNCDPDPVDLPIPANDDTRSS 161 >gi|42820639|emb|CAF32223.1| ribosomal protein S2 [Pseudoalteromonas haloplanktis TAC125] Length = 120 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 51/96 (53%), Positives = 77/96 (80%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L IP+VA+VD Sbjct: 7 LTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLGIPVVAIVD 66 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 TNSNPD VD+++PGNDD+ R+++L+ + VA+A +G Sbjct: 67 TNSNPDGVDFIVPGNDDAIRAVSLYTNAVATAITEG 102 >gi|168705099|ref|ZP_02737376.1| 30S ribosomal protein S2 [Gemmata obscuriglobus UQM 2246] Length = 240 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 33/202 (16%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 +S V +GG ++FV TK QA + V A+R V+ +WLGG +TN++T+ +++L++ Sbjct: 3 LSQVVGKGGLVMFVGTKRQAKEIVEREAQRCGMPFVSERWLGGTLTNYRTIRNRLKRLQE 62 Query: 119 LEE--LLNKENQG-------------------------------FTKKERLNIERKRDKL 145 LE L EN +KK + R+ K+ Sbjct: 63 LEAMWLPQGENPNRVDLNSHIASMMTEAGKLDPALAPDTADILTHSKKMISTLSRELLKI 122 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGND 205 +R L GIRDM PD + +V N+E +A++EA+R+ + +A++DT+S+PD VD IPGND Sbjct: 123 RRNLMGIRDMIKPPDALVIVGPNKEHIAVKEAKRMGVTTIALIDTDSDPDPVDLPIPGND 182 Query: 206 DSSRSIALFCDLVASAAIDGIA 227 DS RSI + +A A ++G A Sbjct: 183 DSIRSIEVVLAKLADACLEGRA 204 >gi|146414307|ref|XP_001483124.1| hypothetical protein PGUG_05079 [Meyerozyma guilliermondii ATCC 6260] Length = 456 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 22/223 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI LL +G GH +W P + YI+ E H+IDL +T+ L++A V+ +G Sbjct: 238 TIASLLAAGCHLGHAKSMWRPSTQPYIYGEYKGIHLIDLQETISALKRATSVMKGVAKKG 297 Query: 67 GRILFVATKS--QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL+V T + + EAA+RS Y V+ +W+ G +TN+ VS+ + Sbjct: 298 GIILYVGTLKHWEQHRALEEAAERSNGYYVSKRWIPGTITNFTEVSKQV----------- 346 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGL--PDLMFVVDTNREKLAIQEARRLRI 182 G +++ ++I D+ G + + PDL+ +++ + I E +LRI Sbjct: 347 ----GGGQRQEIDIA---DEPTNRQIGEDEAASVLKPDLVVILNPVENRNCINECIKLRI 399 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + + DTN P L+ Y IP NDDS+R+ + ++++AA +G Sbjct: 400 PTIGLCDTNMEPSLLTYPIPCNDDSTRASSYMTGILSTAAEEG 442 >gi|145629993|ref|ZP_01785775.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021] gi|145632290|ref|ZP_01788025.1| preprotein translocase subunit SecA [Haemophilus influenzae 3655] gi|145641898|ref|ZP_01797472.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|144984274|gb|EDJ91697.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021] gi|144987197|gb|EDJ93727.1| preprotein translocase subunit SecA [Haemophilus influenzae 3655] gi|145273377|gb|EDK13249.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.4-21] Length = 134 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/118 (47%), Positives = 82/118 (69%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLE 118 >gi|110225641|ref|YP_665647.1| ribosomal protein S2 [Nephroselmis olivacea] gi|6066156|gb|AAF03174.1|AF110138_6 ribosomal protein S2 [Nephroselmis olivacea] Length = 235 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 106/191 (55%), Gaps = 6/191 (3%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 W+P M + RN +I+D+S+T+ L AL VIS V++ G ILF+ + + + + Sbjct: 33 WHPTMSSNLIASRNAVYILDISKTIKGLFNALDVISSIVSQKGHILFINSNPLYNKLLQK 92 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 + + Q VN++W+GG +TNW +S+ I+ + + L+ F + +K Sbjct: 93 TCELTEQSYVNNRWVGGTLTNWPIISKEIETYKKVVTQLHLYTSLFYVS-----TPRYEK 147 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 +K++ G + PDL+ V++ ++ K AI EA L IP++A+VD+++N + Y IPGN Sbjct: 148 MKKSFQGFQTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGN 207 Query: 205 DDSSRSIALFC 215 +SS +C Sbjct: 208 -NSSYEFIYYC 217 >gi|16603896|gb|AAL27196.1| ribosomal protein subunit 2 [Pleuricospora fimbriolata] Length = 159 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 15/167 (8%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG ++L V TK+ +D V AA+R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGDQLLIVGTKNIVADFVARAARRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL-------DGIRDMGGLPDLMF 163 + ++K RDL L K RLN K + KR L GI+ M GLPD++ Sbjct: 61 KRLRKFRDLRMEL--------KMGRLNRIPKNTRFKRQLAHLQAYFGGIQYMRGLPDIVI 112 Query: 164 VVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 ++D ++E +A++E L IP + ++DTNS+PDLVD IP NDD+ S Sbjct: 113 ILDQHKEYMALRECVTLGIPTICLIDTNSDPDLVDLPIPANDDNRFS 159 >gi|83745420|gb|ABC42417.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 5/166 (3%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ V Sbjct: 2 WNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVAC 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT---KKERLNIERK 141 AA ++ +CVN KWLGG +TNW T + + + RDL + ++ GF K++ +R+ Sbjct: 62 AAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLR--IEQKIGGFKRLPKRDAAVSKRQ 119 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 120 LSRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|16603944|gb|AAL27218.1| ribosomal protein subunit 2 [Leucothoe axillaris] Length = 174 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV- 109 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 110 --SQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + +KLR +E+ + + N+ K+ ++RK L+ L GI+ M GLPD++ ++D Sbjct: 61 RRLRKFRKLRRMEQKMGRRNR-LLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQ 119 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 120 HKEYTALRECIILGIPTVCLIDTNCDPDLVDFPIPANDDTRASI 163 >gi|262186758|ref|YP_003276017.1| ribosomal protein S2 [Pleurozia purpurea] gi|237780755|gb|ACR19401.1| ribosomal protein S2 [Pleurozia purpurea] Length = 237 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 10/221 (4%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL + GHR + + Y++ RN IIDL +T+ L++A I + Sbjct: 8 VIQKLLSTNAYLGHR--IPTSDFQGYLYGFRNEMAIIDLEKTLICLRRACNFIGSIIGAK 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G +L V T + + + AKR+ Q +N KW+GG +TNWK + + + +D N + Sbjct: 66 GHLLLVNTNPEYNRIIQRMAKRTNQSYINHKWIGGFLTNWKHMRRVQKHFQDFSAHPNLK 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + FT R R K+++ +GI +PD +++ N+ +AI EA +L+IPIVA Sbjct: 126 D-AFTSSPFDYFPRFR-KMQKCFEGIVT-HNIPDCSVIMNANQNSMAILEANQLQIPIVA 182 Query: 187 VVDTNSNPD----LVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VD+N P+ L+ Y +P NDDS + + LF +L+ I Sbjct: 183 LVDSNI-PNRLHKLITYPVPVNDDSIKFVYLFRNLITKTVI 222 >gi|16603940|gb|AAL27216.1| ribosomal protein subunit 2 [Vaccinium stamineum] Length = 174 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV- 109 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 110 --SQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + +KLR +E+ + + N+ K+ ++RK L+ L GI+ M GLPD++ ++D Sbjct: 61 RRLRKFRKLRRMEQKIGRRNR-LLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQ 119 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 120 HKEYTALRECIILGIPTVCLIDTNCDPDLVDFPIPANDDTRASI 163 >gi|224532778|ref|ZP_03673394.1| ribosomal protein S2 [Borrelia burgdorferi WI91-23] gi|224512266|gb|EEF82651.1| ribosomal protein S2 [Borrelia burgdorferi WI91-23] Length = 140 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 84/116 (72%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 5 TMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 65 KKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 >gi|16603938|gb|AAL27215.1| ribosomal protein subunit 2 [Gaultheria macrostigma] Length = 167 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 4/164 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRD---LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + ++K R +E+ + + N+ K+ ++RK L+ L GI+ M GLPD++ ++D Sbjct: 61 RRLRKFRKLRRMEQKMGRRNR-LLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQ 119 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 120 HKEYTALRECIILGIPTVGLIDTNCDPDLVDFPIPANDDTRASI 163 >gi|16603956|gb|AAL27224.1| ribosomal protein subunit 2 [Enkianthus chinensis] Length = 174 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 99/163 (60%), Gaps = 3/163 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V T+ +A+D V AA + + VN KWL G +TNW Sbjct: 1 FLSEACDLVFDAASRGKQFLIVGTRREAADSVEGAALTARCHYVNKKWLSGALTNWSITE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++ LRDL E+ ++K N+ F +R L+ L+G++ M GLPD++ +VD + Sbjct: 61 KRLRLLRDLKMEQKMDKLNR-FPYASAAMFKRNFSHLEECLNGMKYMTGLPDIVIIVDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++ A++E L IP ++++DTN +PDL D++IP NDD+ SI Sbjct: 120 QDSTALRECINLGIPTISLMDTNCDPDLGDFLIPANDDTRASI 162 >gi|16603954|gb|AAL27223.1| ribosomal protein subunit 2 [Enkianthus chinensis] Length = 173 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 99/163 (60%), Gaps = 3/163 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V T+ +A+D V AA + + VN KWL G +TNW Sbjct: 1 FLSEACDLVFDAASRGKQFLIVGTRREAADSVEGAALTARCHYVNKKWLSGALTNWSITE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++ LRDL E+ ++K N+ F +R L+ L+G++ M GLPD++ +VD + Sbjct: 61 KRLRLLRDLKMEQKMDKLNR-FPYASAAMFKRNFSHLEECLNGMKYMTGLPDIVIIVDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++ A++E L IP ++++DTN +PDL D++IP NDD+ SI Sbjct: 120 QDSTALRECINLGIPTISLMDTNCDPDLGDFLIPANDDTRASI 162 >gi|224534322|ref|ZP_03674900.1| ribosomal protein S2 [Borrelia spielmanii A14S] gi|224514424|gb|EEF84740.1| ribosomal protein S2 [Borrelia spielmanii A14S] Length = 139 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 48/116 (41%), Positives = 84/116 (72%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 5 TMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKDG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 65 KKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 >gi|255524242|ref|ZP_05391201.1| ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296185363|ref|ZP_06853773.1| ribosomal protein S2 [Clostridium carboxidivorans P7] gi|255512067|gb|EET88348.1| ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296050197|gb|EFG89621.1| ribosomal protein S2 [Clostridium carboxidivorans P7] Length = 165 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 53/107 (49%), Positives = 71/107 (66%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I G Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFIRSVSEEG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +LFV TK QA + + E AKRS + VN++WLGGMMTN+ T+ I Sbjct: 65 KDVLFVGTKKQAQEAIQEEAKRSGMHFVNNRWLGGMMTNFTTIKTRI 111 >gi|73543631|gb|AAZ77888.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G KK L Sbjct: 121 ELDLEASNSGLRKKSSL 137 >gi|83745509|gb|ABC42455.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 3/165 (1%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI ER + HII+L++T L +A ++ D +RG ++L V T +D V + Sbjct: 2 WNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFDAASRGKQLLIVGTNKIRADLVEQ 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKR 142 AA ++ + VN KW GG +TNW +QK R+L E+ + N KK+ ++R+ Sbjct: 62 AAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRFN-CLPKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 121 SRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|83745418|gb|ABC42416.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745422|gb|ABC42418.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745424|gb|ABC42419.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745426|gb|ABC42420.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745434|gb|ABC42424.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745440|gb|ABC42427.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745442|gb|ABC42428.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 3/165 (1%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ V Sbjct: 2 WNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVAC 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ +R+ Sbjct: 62 AAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKR-LPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|225679004|gb|EEH17288.1| 37S ribosomal protein MRP4 [Paracoccidioides brasiliensis Pb03] Length = 600 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 19/222 (8%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R+ HII L T L++A +V+ + R Sbjct: 360 ITLELLLASQTHLGHATSLWNPANSEYIFGSRHGIHIISLDVTAAYLRRAAKVVHEVAKR 419 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA R+ V +W+ G +TN + + +K +++N Sbjct: 420 GGLILFVGTRKGQRRIVVGAASRAKGCHVFQRWIPGSLTNSEQILGHCEK-----KVVNA 474 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ E DKL++ L ++ PDL+ ++ + + E IP + Sbjct: 475 FDEPLGGYE--------DKLEK-LPALK-----PDLVVCLNPLENRPLLHECGLHMIPTI 520 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++DT++NP V Y IP NDDS RS+A+ ++ AA +G A Sbjct: 521 GIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAAEEGQA 562 >gi|190348517|gb|EDK40981.2| hypothetical protein PGUG_05079 [Meyerozyma guilliermondii ATCC 6260] Length = 456 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 22/223 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI LL +G GH +W P + YI+ E H+IDL +T+ L++A V+ +G Sbjct: 238 TIASLLAAGCHLGHAKSMWRPSTQPYIYGEYKGIHLIDLQETISALKRATSVMKGVAKKG 297 Query: 67 GRILFVATKS--QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL+V T + + EAA+RS Y V+ +W+ G +TN+ VS+ + Sbjct: 298 GIILYVGTLKHWEQHRALEEAAERSNGYYVSKRWIPGTITNFTEVSKQV----------- 346 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGL--PDLMFVVDTNREKLAIQEARRLRI 182 G +++ ++I D+ G + + PDL+ +++ + I E + RI Sbjct: 347 ----GGGQRQEIDIA---DEPTNRQIGEDEAASVLKPDLVVILNPVENRNCINECIKSRI 399 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + + DTN P L+ Y IP NDDS+R+ + ++++AA +G Sbjct: 400 PTIGLCDTNMEPSLLTYPIPCNDDSTRASSYMTGILSTAAEEG 442 >gi|226288080|gb|EEH43593.1| 40S ribosomal protein mrp4 [Paracoccidioides brasiliensis Pb18] Length = 390 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 19/222 (8%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R+ HII L T L++A +V+ + R Sbjct: 150 ITLELLLASQTHLGHATSLWNPANSEYIFGSRHGIHIISLDVTAAYLRRAAKVVHEVAKR 209 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA R+ V +W+ G +TN + + +K +++N Sbjct: 210 GGLILFVGTRKGQRRIVVGAASRAKGCHVFQRWIPGSLTNSEQILGHCEK-----KVVNA 264 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ E DKL++ L ++ PDL+ ++ + + E IP + Sbjct: 265 FDEPLGGYE--------DKLEK-LPALK-----PDLVVCLNPLENRPLLHECGLHMIPTI 310 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++DT++NP V Y IP NDDS RS+A+ ++ AA +G A Sbjct: 311 GIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAAEEGQA 352 >gi|73543657|gb|AAZ77901.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I T+ + Sbjct: 7 LTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACIQTTIGQ 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 67 EKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLEA 126 Query: 126 ENQGFTKKERL 136 N G KK L Sbjct: 127 SNSGLRKKSSL 137 >gi|83745438|gb|ABC42426.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 3/165 (1%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ V Sbjct: 2 WNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVAC 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ +R+ Sbjct: 62 AAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKR-LPKRDAAVSKRQF 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|165910483|gb|ABY73996.1| ribosomal protein S2 [Cuscuta reflexa] Length = 173 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 100/173 (57%), Gaps = 5/173 (2%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I +R HI ++++T L +A ++ D RG + L V T ++A+D V A+++ Sbjct: 1 MAPFIAAKRKGIHITNITRTARFLSEACDLVFDAARRGKKFLIVGTNNKAADSVARASRK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT---KKERLNIERKRDKL 145 + + VN KWL GM+TNW + K RDL + ++ G K++ +R+ +L Sbjct: 61 ARCHYVNKKWLAGMLTNWSITETRLNKFRDLR--MEQKKGGLNHLLKRDATMFKRQLARL 118 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVD 198 + L GI+ M GLPD++ +VD ++E A++E L IP + ++DTN +P+L D Sbjct: 119 QTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPTICLIDTNCDPNLSD 171 >gi|328768522|gb|EGF78568.1| hypothetical protein BATDEDRAFT_4793 [Batrachochytrium dendrobatidis JAM81] Length = 195 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 34/220 (15%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LL + + GH LWNP M YI+ R+ THII+L T+ L++A I Sbjct: 6 ISLKSLLAANLHLGHSTTLWNPSMLPYIYGTRHGTHIINLEHTLTHLRRAAAFIRQVAMS 65 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G I+F+ TK ++AA Y + ++W+GG +TN K R L + Sbjct: 66 NGNIVFLGTKPAIHKITVDAALLGNAYYI-TQWVGGTITN---------KERTL-----R 110 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + GF D + PD++ V+D A++EA IP++ Sbjct: 111 HSTGF-------------------DPSKPHVHTPDVLVVLDYINNLWAVREANVAHIPVI 151 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AV DTN++P LV Y IP NDDS I L ++++A+ DG Sbjct: 152 AVCDTNTDPTLVQYPIPANDDSIAGIKLIAGVLSAASRDG 191 >gi|289810515|ref|ZP_06541144.1| hypothetical protein Salmonellaentericaenterica_41562 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 132 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/115 (49%), Positives = 84/115 (73%), Gaps = 1/115 (0%) Query: 112 SIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 SI++L+DLE + + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E Sbjct: 1 SIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHE 60 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G Sbjct: 61 HIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREG 115 >gi|16603901|gb|AAL27197.1| ribosomal protein subunit 2 [Pityopus californicus] Length = 161 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 3/162 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG L V TK + + V AA R+ + VN K LGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGNLFLIVGTKKRVASLVARAAIRARCHYVNKKRLGGMLTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + + K RDL E+ + + + K++ ++R+ L+ L GI+ M G PD++ ++D + Sbjct: 61 KRLNKFRDLRMEQKMGRLER-LPKRDAARLKRQLAHLQAYLGGIKYMTGFPDIVIILDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 +E A++E L IP + ++DTN +PDLVD IP NDD+ S Sbjct: 120 KEYTALRECITLGIPTICLIDTNCDPDLVDLPIPANDDNRSS 161 >gi|213407902|ref|XP_002174722.1| 40S ribosomal protein mrp4 [Schizosaccharomyces japonicus yFS275] gi|212002769|gb|EEB08429.1| 40S ribosomal protein mrp4 [Schizosaccharomyces japonicus yFS275] Length = 247 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 22/208 (10%) Query: 19 GHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQA 78 GH LWNP + +I+ RN HII L +T+ L++A+ VI + G ILFV TK Sbjct: 61 GHATSLWNPMNQPFIYGIRNGIHIISLDKTLVFLRRAINVIQEVARTKGIILFVGTKPGQ 120 Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNI 138 VM AAKR Y + ++W+ G++TN KTV ++ + KE + T Sbjct: 121 KLSVMAAAKRCNGYFIFNRWVPGLLTNAKTVQPTLGGSLKTVDQDGKEVRAPTPSFL--- 177 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVD 198 PDL+ +++ +EA+R+ +P + +VDTN +P LV Sbjct: 178 -------------------YPDLIVILNPLENINVCKEAQRVSVPTIGIVDTNVDPRLVT 218 Query: 199 YVIPGNDDSSRSIALFCDLVASAAIDGI 226 Y IP NDDS R L L++ AA +G+ Sbjct: 219 YPIPANDDSLRCSDLIVGLLSQAACEGM 246 >gi|16603942|gb|AAL27217.1| ribosomal protein subunit 2 [Pernettya prostrata] Length = 167 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 98/164 (59%), Gaps = 4/164 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRD---LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + ++K R +E+ + + + K+ ++RK L+ L GI+ M GLPD++ ++D Sbjct: 61 RRLRKFRKLRRMEQKMGRRTR-LLKRNVARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQ 119 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 120 HKEYTALRECIILGIPTVGLIDTNCDPDLVDFPIPANDDTRASI 163 >gi|310791949|gb|EFQ27476.1| ribosomal protein S2 [Glomerella graminicola M1.001] Length = 384 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 23/226 (10%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L+ S GH LWNP RYI+ R HII L T L++A +V+ + R Sbjct: 110 ITLELLMASQTHMGHHTSLWNPANARYIYGVRQGIHIISLETTAAHLRRAARVVEEVAYR 169 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS--QSIQKLRDLEELL 123 GG ILFV T+ + V +AA+ + + +KW G +TN +S ++I+ + + + L Sbjct: 170 GGLILFVGTRKGQMEIVTKAAQLARGCHLFTKWTPGNITNRDMISRGKAIKVVDEKDATL 229 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF + ER + R L +PDL+ ++ + E +P Sbjct: 230 G----GFERLERTS---------RPL--------IPDLVVCLNPLENYTLLYECGLANVP 268 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DT++NPD V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 269 TIGIIDTDANPDWVTYTIPANDDSYRSVAVIGGVLGRAGEQGQKRR 314 >gi|242766917|ref|XP_002341265.1| 40S ribosomal protein S2, putative [Talaromyces stipitatus ATCC 10500] gi|218724461|gb|EED23878.1| 40S ribosomal protein S2, putative [Talaromyces stipitatus ATCC 10500] Length = 344 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 23/223 (10%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 112 EVTLELLLASQSHLGHTTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVAR 171 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV--SQSIQKLRDLEEL 122 RGG ILF T+ +CV+ AA+ + Y V +W+ G +TN + + + I+ + L+E Sbjct: 172 RGGLILFAGTRPGQKECVVRAAEMARGYHVFERWIPGSLTNGQQILGNCEIKVVNALDEE 231 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L Q T++ L PDL+ ++ ++ + E I Sbjct: 232 LPDYKQYLTERPVLK---------------------PDLVICLNPIENEVLLHECGLNNI 270 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P + ++DT+++P V Y IP NDDS R + L + A +G Sbjct: 271 PTIGIIDTDADPTRVTYPIPANDDSLRCVQLIAGALGRAGEEG 313 >gi|83745436|gb|ABC42425.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 95/165 (57%), Gaps = 3/165 (1%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ Sbjct: 2 WNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSAAC 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ +R+ Sbjct: 62 AAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKR-LPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|83745504|gb|ABC42453.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745513|gb|ABC42456.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 95/167 (56%), Gaps = 7/167 (4%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI ER + HII+L++T L +A ++ V+RG + L V T +D V + Sbjct: 2 WNPKMALYISAERKHRHIINLTKTARFLYEACNLVFYAVSRGKQFLIVGTNKIRADLVEQ 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIER 140 AA ++ + VN KW GG +TNW +QK R+ L+ +E G KK+ ++R Sbjct: 62 AAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEEKAGRLECLPKKDAAVVKR 118 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 119 QLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|321468436|gb|EFX79421.1| hypothetical protein DAPPUDRAFT_304832 [Daphnia pulex] Length = 259 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 46/228 (20%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F ++ L ++ V +GH++ +P M+ YIF R I DL +T +LQ AL + + Sbjct: 68 FRLKDLFDAKVHYGHKDGTLHPNMKPYIFGSRLGHIIFDLDKTTELLQDALNFTAHIAYK 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q + V AAK + +Y +W ++TN + + + + +L Sbjct: 128 GGIILFVSHYPQHTLTVENAAKEAGEYAHAREWDFHLLTNSEKIYKGVTRL--------- 178 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLR 181 PDL+ +V T +E A+++A ++ Sbjct: 179 ---------------------------------PDLIIMVSTLNPQMQEHTAVRDAAKMC 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + +VD+NSNP+L+ Y +PGNDDS ++ L+C+L A + G +++ Sbjct: 206 IPTIGIVDSNSNPNLITYPVPGNDDSPTAVQLYCNLFRDAILLGKSKK 253 >gi|301792270|ref|XP_002931102.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Ailuropoda melanoleuca] Length = 283 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 68 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAYR 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 128 GGIILFVSRSRQFSHLIETTARSCGEYAHTRYFKGGLLTNAPLLLGPMVRLPDLIIFLHT 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 188 LNNVF--------------------------------------EPHVAVRDAAKMHIPTV 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 VVDTN NP L+ Y +PGNDDS S+ LFC L +A Sbjct: 210 GVVDTNCNPCLITYPVPGNDDSPPSVRLFCRLFQTA 245 >gi|302418244|ref|XP_003006953.1| 37S ribosomal protein MRP4 [Verticillium albo-atrum VaMs.102] gi|261354555|gb|EEY16983.1| 37S ribosomal protein MRP4 [Verticillium albo-atrum VaMs.102] Length = 396 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 27/228 (11%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L+ S GH WNP RYI+ R+N H+I L T L++A +V+ + Sbjct: 120 ITLELLMASQTHMGHHRSRWNPANSRYIYGVRDNVHVISLETTASHLRRAARVVEEVAFH 179 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV T+ D V +AA R+ + +KW G +TN + LRD E + Sbjct: 180 GGLVLFVGTRPGQMDIVTKAAGRAGGCHLYTKWTPGAITNRDFI------LRDREVVFLD 233 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGI----RDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ DK DG R M +PDL+ ++ K + E Sbjct: 234 EH---------------DKPVPGFDGHVMDRRPM--VPDLVVCLNPMENKTLLNEGGLGT 276 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + ++DT+++P V Y IP NDDS RS +L ++ A +G R+ Sbjct: 277 IPTIGIIDTDADPTWVTYAIPANDDSLRSTSLIGGILGRAGQEGQKRR 324 >gi|241956832|ref|XP_002421136.1| mitochondrial ribosomal protein, small subunit, putative [Candida dubliniensis CD36] gi|223644479|emb|CAX41295.1| mitochondrial ribosomal protein, small subunit, putative [Candida dubliniensis CD36] Length = 462 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 25/247 (10%) Query: 4 PQF---TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 PQF TI +L+ +G GH + P M+ +I+ + HIIDL++T+ L A +VI Sbjct: 233 PQFDNTTIAKLMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIE 292 Query: 61 DTVARGGRILFVATKSQAS---DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 V +GG +L+V T S + +++A++RS Y VN +W+ G +TN+ V++ +++ Sbjct: 293 GVVEKGGVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIK 352 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E+ K+ + TK I+ PDL+ +++ + I+E Sbjct: 353 TKMEVDMKDQKITTKNSNRIIK-------------------PDLVVLLNPVENRNCIKEC 393 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP + + DT+ P L+ Y IP NDDS RS+ L +++ +A G+ ++ S + Sbjct: 394 ISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSKSAESGLQKRISAIKKLE 453 Query: 238 KSAGETV 244 ++ G+ V Sbjct: 454 ENDGKVV 460 >gi|83745428|gb|ABC42421.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 3/165 (1%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI RN HI +L +T L +A + D +RG + L V TK + ++ V Sbjct: 2 WNPKMALYISANRNGIHITNLIKTARFLSEACNLGFDAASRGKQFLIVGTKKKTANSVAC 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL E+ + + + K++ +R+ Sbjct: 62 AAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKR-LPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|83745507|gb|ABC42454.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 95/165 (57%), Gaps = 3/165 (1%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI ER + HII+L++T L +A ++ +RG ++L V T +D V + Sbjct: 2 WNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQLLIVGTNKIRADLVEQ 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKR 142 AA ++ + VN KW GG +TNW +QK R+L E+ + N KK+ ++R+ Sbjct: 62 AAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRFN-CLPKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 121 SRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|291230876|ref|XP_002735378.1| PREDICTED: mitochondrial ribosomal protein S2-like [Saccoglossus kowalevskii] Length = 300 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 98/218 (44%), Gaps = 38/218 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L + V GH+ L N M +YIF R IIDL +TV LQ AL S R Sbjct: 105 FTLQDLFRANVHVGHKTGLLNVHMRKYIFGVRQKICIIDLDKTVKHLQIALNFASHIAYR 164 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ Q + V + AK ++ +W GG TN KL DL LN Sbjct: 165 KGSILFINRSLQFTHLVEKTAKECGEFAQTRRWQGGCFTNSLVQYGPEVKLPDLVVFLNT 224 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N F +E A++++ ++ IP + Sbjct: 225 QNNVF--------------------------------------QEHAAVRDSAKMNIPTI 246 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDTN NP+L+ Y +PGNDD+ ++ L+C L +A + Sbjct: 247 GIVDTNCNPNLITYPVPGNDDTPDAMELYCRLFKNAIL 284 >gi|281352038|gb|EFB27622.1| hypothetical protein PANDA_021849 [Ailuropoda melanoleuca] Length = 234 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 23 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAYR 82 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 83 GGIILFVSRSRQFSHLIETTARSCGEYAHTRYFKGGLLTNAPLLLGPMVRLPDLIIFLHT 142 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 143 LNNVF--------------------------------------EPHVAVRDAAKMHIPTV 164 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 VVDTN NP L+ Y +PGNDDS S+ LFC L +A Sbjct: 165 GVVDTNCNPCLITYPVPGNDDSPPSVRLFCRLFQTA 200 >gi|325989653|ref|YP_004249352.1| 30S ribosomal protein S2 [Mycoplasma suis KI3806] gi|323574738|emb|CBZ40394.1| 30S ribosomal protein S2 [Mycoplasma suis] Length = 189 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 108/177 (61%), Gaps = 4/177 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +++E + G ++ LW PKM Y+ E HII+L +T+ LQ + D Sbjct: 9 SLEKMIEFDLHLGAKSRLWEPKMAPYLLKEEYKKRHIINLEKTMEHLQSVYDYLYDLSRS 68 Query: 66 GGRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G I+FV++K++ +D V E+AKR + + +WLGG+ TN+K V++++ KL +L++ L Sbjct: 69 GLEIMFVSSKNKVIADIVKESAKRVNAFYITQRWLGGLFTNFKQVNKTLNKLTELDDFLR 128 Query: 125 KEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +EN Q TKKE + +K+ K+++ DGI+ + LP+++ + + + + I+EA++ Sbjct: 129 QENLHQQLTKKEISQLRKKKQKIEKNYDGIKGLSKLPNVLVIFNPVNDLIPIKEAKK 185 >gi|145255595|ref|XP_001399013.1| 40S ribosomal protein S2 [Aspergillus niger CBS 513.88] gi|134084605|emb|CAK97481.1| unnamed protein product [Aspergillus niger] Length = 370 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 34/274 (12%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL + GH WNP+ RYIF R THII L T L++A +V+ + RG Sbjct: 106 TLEMLLANQTHLGHSTSRWNPQNSRYIFGIREGTHIISLDVTAAYLRRAAKVVEEVAYRG 165 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQK--LRDLEELLN 124 G ILF T+ V+ AA+ + Y + +W+ G +TN + + +K + L+E L+ Sbjct: 166 GLILFAGTRKGQKRAVVRAAELAQGYHIFERWIPGSLTNGQQILGHCEKKIVNGLDETLD 225 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 D K L+ R + PDL+ ++ + + E +P Sbjct: 226 ------------------DLWKEELESYRALK--PDLVVCLNPVENVVLLHECGLNNVPT 265 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ----------HSYMG 234 + ++DT+++P V Y IP NDDS RS+ L ++ A G R+ + +M Sbjct: 266 IGIIDTDADPTRVTYPIPANDDSLRSVTLIAGVLGRAGEVGQRRRLARARKGHLTYEHME 325 Query: 235 ADTKSAGETVVHSKEGMQLEEDSQS--SESSVLD 266 E + + EG + E SQ SE S L+ Sbjct: 326 PLRVQVEEQTLETAEGQKSEASSQEVVSEGSPLE 359 >gi|73543643|gb|AAZ77894.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 56/137 (40%), Positives = 81/137 (59%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + E A ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREVAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G KK L Sbjct: 121 ELDLEASNSGLRKKRSL 137 >gi|16603924|gb|AAL27208.1| ribosomal protein subunit 2 [Pyrola aphylla] gi|16603926|gb|AAL27209.1| ribosomal protein subunit 2 [Pyrola picta] Length = 173 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKKVADLVARAAIRARCHYVNKKWLGGILTNWSTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + K L E+ + N+ K++ ++R+ L+ L G++ M LPD++ ++D + Sbjct: 61 TRLAKFSGLRIEQTMGSLNR-LPKRDAARLKRQLSYLQTNLGGLKYMKRLPDIVIIIDQH 119 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 +E A++E L IP + ++DTN +PD +D IP NDD+ S+ Sbjct: 120 KEYKALRECVILGIPTICLIDTNCDPDRIDLPIPANDDNRSSV 162 >gi|328775193|gb|AEB39992.1| ribosomal protein S2 [Funaria hygrometrica] Length = 239 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 26/228 (11%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + GHR + + Y++ RN II+L +T+ L++A +I + G Sbjct: 7 IQKLLSTNAYLGHR--IPTSDFQGYLYGFRNEMAIINLEKTLICLRRACNLIESIIRAKG 64 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V T + + V + AKR+ Q +N KW+GG +TN K + + K Sbjct: 65 HFLLVNTDPEYNKIVQQMAKRTNQSYINHKWIGGFLTNRKHMKN-----------VQKHF 113 Query: 128 QGFTKKERL---------NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 Q F+ +L + K+++ +GI +PD + +++ N+ +AI EA Sbjct: 114 QNFSAHSKLKDASTSSPFDFFPHFRKMQKCFEGIMT-HDIPDCLVIINANKNSMAILEAN 172 Query: 179 RLRIPIVAVVDTN-SN--PDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +L+IPIV++VD+N SN L+ Y IP NDDS + + LFC+L+ I Sbjct: 173 QLQIPIVSLVDSNISNRLQKLITYPIPVNDDSIQFVYLFCNLITKTVI 220 >gi|257206626|emb|CAX82941.1| Mitochondrial 28S ribosomal protein S2 [Schistosoma japonicum] Length = 270 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 82/256 (32%), Positives = 112/256 (43%), Gaps = 52/256 (20%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ L ++ V GHR+ L N M+ YIF R IIDL QT +L AL + R Sbjct: 57 SVTDLFQARVHLGHRSVLRNDYMKPYIFGCRQGIDIIDLDQTCSLLFDALNFTAHIAYRQ 116 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV Q V A+ +Y KW GG+ TN V +L DL LL+ Sbjct: 117 GIILFVYQNKQMLPLVERTAENVGEYSYCRKWEGGVFTNSSDVFHDSVRLPDLVLLLSTC 176 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 N +R A+++A ++ IP V Sbjct: 177 NS--------------------------------------ISRPHSAVRDAAKMLIPTVG 198 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN++P L+ Y +PGNDDS ++ LFC L A A IAR G + S + + H Sbjct: 199 VVDTNADPRLISYPVPGNDDSPTAVRLFCALFAEA----IAR-----GKRSASRDQILKH 249 Query: 247 SKEGMQLEEDSQSSES 262 QL + S+S ES Sbjct: 250 -----QLSQQSESPES 260 >gi|68475753|ref|XP_718083.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] gi|68475888|ref|XP_718017.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] gi|46439762|gb|EAK99076.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] gi|46439837|gb|EAK99150.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] Length = 460 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 25/247 (10%) Query: 4 PQF---TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 P+F TI +L+ +G GH + P M+ +I+ + HIIDL++T+ L A +VI Sbjct: 231 PKFDNTTIAKLMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIE 290 Query: 61 DTVARGGRILFVATKSQAS---DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 V +GG +L+V T S + +++A++RS Y VN +W+ G +TN+ V++ +++ Sbjct: 291 GVVEKGGVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIK 350 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E+ K+ + TK I+ PDL+ +++ + I+E Sbjct: 351 TKMEVDMKDQKITTKNSNKIIK-------------------PDLVVLLNPVENRNCIKEC 391 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP + + DT+ P L+ Y IP NDDS RS+ L +++ +A G+ ++ S + Sbjct: 392 ISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSKSAESGLQKRISAVKKLE 451 Query: 238 KSAGETV 244 ++ G+ V Sbjct: 452 ENDGKVV 458 >gi|238883002|gb|EEQ46640.1| conserved hypothetical protein [Candida albicans WO-1] Length = 461 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 25/247 (10%) Query: 4 PQF---TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 P+F TI +L+ +G GH + P M+ +I+ + HIIDL++T+ L A +VI Sbjct: 232 PKFDNTTIAKLMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIE 291 Query: 61 DTVARGGRILFVATKSQAS---DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 V +GG +L+V T S + +++A++RS Y VN +W+ G +TN+ V++ +++ Sbjct: 292 GVVEKGGVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIK 351 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E+ K+ + TK I+ PDL+ +++ + I+E Sbjct: 352 TKMEVDMKDQKITTKNSNKIIK-------------------PDLVVLLNPVENRNCIKEC 392 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP + + DT+ P L+ Y IP NDDS RS+ L +++ +A G+ ++ S + Sbjct: 393 ISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSKSAESGLQKRISAVKKLE 452 Query: 238 KSAGETV 244 ++ G+ V Sbjct: 453 ENDGKVV 459 >gi|158300812|ref|XP_320639.4| AGAP011886-PA [Anopheles gambiae str. PEST] gi|157013341|gb|EAA00165.4| AGAP011886-PA [Anopheles gambiae str. PEST] Length = 211 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 38/233 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ V FGH+ N M+ Y++ R IIDL +TV L+ AL V + R Sbjct: 17 FTVEDLFKARVHFGHKEGTLNDNMKGYLYGSRLGHCIIDLDKTVDYLRAALNVAAHIAYR 76 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + AK ++ W GG+ TN K ++ +L DL N Sbjct: 77 DGIILFFNRNALNAHRVEQTAKECGEFAHTRYWRGGVFTNAKVQFGAVTRLPDLCIFFNT 136 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + DM A+++A ++ IP + Sbjct: 137 MNN-----------------------VLDM---------------HTAVRDAAKMNIPTI 158 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +VDTN NP+L+ Y +PGNDDS +I L+C L +A + G ++ +++ ++ + Sbjct: 159 GIVDTNCNPNLITYPVPGNDDSPAAIELYCKLFKNAILLGKEKRKAHLASEAQ 211 >gi|83745430|gb|ABC42422.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 95/165 (57%), Gaps = 3/165 (1%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI +RN HI +L +T L +A ++ D + G + L V TK + +D V Sbjct: 2 WNPKMGLYISAKRNGIHITNLIKTARFLSEACNLVFDAASGGKQFLIVGTKQKTADSVAC 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKR 142 AA ++ +CVN KWLG +TNW T + + + RDL E+ + + + K++ +R+ Sbjct: 62 AAIKARCHCVNKKWLGPTLTNWSTTERRLHQFRDLRIEQKIGRFKR-LPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|295659251|ref|XP_002790184.1| 40S ribosomal protein mrp4 [Paracoccidioides brasiliensis Pb01] gi|226281889|gb|EEH37455.1| 40S ribosomal protein mrp4 [Paracoccidioides brasiliensis Pb01] Length = 406 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 19/222 (8%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R+ HII L T L++A +V+ + Sbjct: 166 ITLELLLASQTHLGHATSLWNPANSEYIFGSRHGIHIISLDVTAAYLRRAAKVVHEVAKH 225 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA R+ V +W+ G +TN + + +K +++N Sbjct: 226 GGLILFVGTRKGQRRIVVSAASRAKGCHVFQRWIPGSLTNSEQILGHCEK-----KVVNA 280 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ E K +KL AL PDL+ ++ + + E IP + Sbjct: 281 FDEPLG-----GYEEKLEKLP-ALK--------PDLVVCLNPLENRPLLHECGLHMIPTI 326 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++DT++NP V Y IP NDDS RS+A+ ++ A +G A Sbjct: 327 GIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEEGQA 368 >gi|296399414|gb|ADH10532.1| mitochondrial ribosomal protein S2 [Zonotrichia albicollis] Length = 239 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 38 FTLKDLFDARVHLGHKKGCRHRFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 97 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A+ +Y W GG++TN +L DL LN Sbjct: 98 GGIILFVSRRRQFCHLVESTARACGEYAHTRYWQGGLLTNAHIQFGPGVRLPDLLIFLNT 157 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +AI++A ++ IP V Sbjct: 158 LNNVF--------------------------------------EPHVAIRDAAKMNIPTV 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 VVDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 180 GVVDTNCNPCLITYPIPGNDDSPAAVELYCRL 211 >gi|123701323|ref|NP_001074162.1| 28S ribosomal protein S2, mitochondrial [Danio rerio] gi|120537789|gb|AAI29436.1| Zgc:158760 [Danio rerio] Length = 264 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME Y+F R + IIDL QTV LQ+AL + R Sbjct: 70 FSMKDLFDARVHLGHKKGCRHALMEPYLFGCRLDMDIIDLEQTVDHLQRALNFTAHVAFR 129 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV+ + Q + V A+ +Y W GG++TN +L DL L+ Sbjct: 130 GGVVLFVSRRRQFAHLVETTARDCGEYAHTRYWKGGLLTNAPIQYNPGVRLPDLIVFLST 189 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F RE + I++A ++ IP V Sbjct: 190 LNNVF--------------------------------------REHVGIRDAAKMNIPTV 211 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VD+N NP L+ Y +PGNDD+ ++ L+C L Sbjct: 212 GIVDSNCNPSLISYPVPGNDDTPAAMELYCRL 243 >gi|121702475|ref|XP_001269502.1| 40S ribosomal protein S2, putative [Aspergillus clavatus NRRL 1] gi|119397645|gb|EAW08076.1| 40S ribosomal protein S2, putative [Aspergillus clavatus NRRL 1] Length = 342 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 23/226 (10%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + AR Sbjct: 103 ITLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAHLRRAAKVVEEVAAR 162 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV--SQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + Y + +W+ G +TN + + I+ + L+E L Sbjct: 163 GGLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTNGQQILGHCDIKVVNVLDEEL 222 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + N+ ++ + PDL+ ++ + + E +P Sbjct: 223 PQFNEALPEQPAIK---------------------PDLVVCLNPIENAVLLHECGLNNVP 261 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DT+++P V Y IP NDDS R++++ ++ A G R+ Sbjct: 262 TIGIIDTDADPTRVTYPIPANDDSLRAVSIIAGVLGRAGEAGQKRR 307 >gi|91208844|ref|YP_539005.1| ribosomal protein S2 [Physcomitrella patens] gi|90991384|dbj|BAE93076.1| ribosomal protein S2 [Physcomitrella patens] Length = 241 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 26/228 (11%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + GHR + + Y++ RN II+L +T+ L++A +I + G Sbjct: 9 IQKLLSTNAYLGHR--IPTSDFQGYLYGFRNEMAIINLEKTLICLRRACNLIESIIRAKG 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V T + + V + AK++ Q +N KW+GG +TN K + + K Sbjct: 67 HFLLVNTDPEYNKIVQQMAKKTNQSYINHKWIGGFLTNRKHMKN-----------VQKHF 115 Query: 128 QGFTKKERL---------NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 Q F+ +L + K+++ +GI +PD + +++ N+ +AI EA Sbjct: 116 QNFSAHSKLKDASTSSPFDFFPHFRKMQKCFEGIMT-HDIPDCLVIINANKNSMAILEAN 174 Query: 179 RLRIPIVAVVDTN-SN--PDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +L+IPIV++VD+N SN L+ Y IP NDDS + + LFC+L+ I Sbjct: 175 QLQIPIVSLVDSNISNRLQKLITYPIPVNDDSIQFVYLFCNLITKTVI 222 >gi|119187877|ref|XP_001244545.1| hypothetical protein CIMG_03986 [Coccidioides immitis RS] Length = 326 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 21/221 (9%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + R Sbjct: 95 ITLELLLASQSHLGHATSLWNPRNSSYIFGIRDGIHIISLEVTAAYLRRAAKVVEEVARR 154 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+ + Y V +W+ G +TN + + + L+ ++E N Sbjct: 155 GGLILFVGTRKGQRRAVVRAAELAQGYHVFERWVPGSITNGQQILGHCE-LKVVDEFDN- 212 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRLRIPI 184 +L R + + + L PDL+ ++ + + E R IP Sbjct: 213 ------------------ELPRYKENVSEQPVLRPDLVVCLNPIENEPLLTECRAYNIPT 254 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT+++ +V Y IP NDDS RS+A+ ++ A G Sbjct: 255 IGIIDTDADASMVTYPIPANDDSLRSVAVIAGVLGRAGEAG 295 >gi|224073802|ref|XP_002187161.1| PREDICTED: mitochondrial ribosomal protein S2 [Taeniopygia guttata] Length = 240 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 96/213 (45%), Gaps = 38/213 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 39 FTLKDLFDARVHLGHKKGCRHRFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 98 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A+ +Y W GG++TN + +L DL L+ Sbjct: 99 GGIILFVSRRRQFCHLVESTARACGEYAHTRYWQGGLLTNAHILFGPGVRLPDLLIFLST 158 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +AI++A ++ IP V Sbjct: 159 LNNVF--------------------------------------EPHVAIRDAAKMNIPTV 180 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 VVDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 181 GVVDTNCNPCLISYPIPGNDDSPAAMELYCKLF 213 >gi|149642651|ref|NP_001092347.1| 28S ribosomal protein S2, mitochondrial [Bos taurus] gi|189031800|sp|P82923|RT02_BOVIN RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|148877364|gb|AAI46029.1| MRPS2 protein [Bos taurus] gi|296481952|gb|DAA24067.1| 28S ribosomal protein S2, mitochondrial [Bos taurus] Length = 293 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 96/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L + V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 68 FSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAFR 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 128 GGIILFVSRARQFSHLIESTARSCGEYAHTRYFKGGLLTNAPLLLGARVRLPDLIIFLHT 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 188 LNNVF--------------------------------------EPHVAVRDAAKMSIPTV 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 VVDTN NP L+ Y +PGNDDS ++ LFC L +A Sbjct: 210 GVVDTNCNPCLITYPVPGNDDSPPAVQLFCQLFQTA 245 >gi|301500934|ref|YP_003795399.1| ribosomal protein S2 [Alveolata sp. CCMP3155] gi|300069480|gb|ADJ66587.1| ribosomal protein S2 [Chromerida sp. RM11] Length = 238 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 5/224 (2%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ L+++ V GH W+P++ + + ++IDL QT +L A + RG Sbjct: 5 SLESLIKNKVYLGHSKSKWHPRIAFFTRAVVRSHYLIDLVQTAKLLSTAYTYLFKMAKRG 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL---L 123 + LFV TK+ AS AA + VN W G++TNW + ++ L + L Sbjct: 65 HKFLFVGTKAVASPWTKRAAVCCGSFYVNQVWRSGLLTNWTFLRGRVRLLSWFNRVFLWL 124 Query: 124 NKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K + + K L++ER+ KL + G+ + +P+++ +VD EK AI E+ +LR Sbjct: 125 QKRDSLKALPKGLVLSLERRYTKLSLEMSGLVGLHSVPNIIIIVDPEHEKQAILESIKLR 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +V + D+ S+ + + +P NDDSS S+ ++++A + G Sbjct: 185 RILVGITDSASHVNSIHMPVPANDDSSLSVKTVLQILSTAILRG 228 >gi|62857737|ref|NP_001016765.1| mitochondrial ribosomal protein S2 [Xenopus (Silurana) tropicalis] gi|89267463|emb|CAJ83584.1| mitochondrial ribosomal protein S2 [Xenopus (Silurana) tropicalis] Length = 280 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L +S V GH+ + ME Y+F R IIDL QT+ LQ AL V + R Sbjct: 79 FSLRELYDSRVHLGHKKGCRHRLMEPYLFGCRLEQDIIDLDQTMRHLQLALNVTAHIAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y W GG++TN + +L DL L+ Sbjct: 139 KGVILFVSRNRQFSHLIESTARDCGEYAHTRYWQGGLLTNAPVQYGAGVRLPDLIVFLST 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F + +AI++A ++ IP V Sbjct: 199 LNTVF--------------------------------------EQHVAIRDAAKMNIPTV 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 VVDTN NP L+ Y IPGNDDS+ ++ L+C L Sbjct: 221 GVVDTNCNPGLITYPIPGNDDSAPAMELYCRL 252 >gi|170056282|ref|XP_001863960.1| mitochondrial 28S ribosomal protein S2 [Culex quinquefasciatus] gi|167876029|gb|EDS39412.1| mitochondrial 28S ribosomal protein S2 [Culex quinquefasciatus] Length = 244 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 38/223 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ V GH+ + M+ Y++ R +IDL +T L+ AL V + R Sbjct: 51 FTVEDLFKANVHLGHKEGTLHDNMKGYLYGSRLGHCVIDLDKTAEYLRHALNVTAHIAYR 110 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF +Q V + A +Y W GG+ TN ++ +L DL LN Sbjct: 111 GGIILFFNRTAQNGHIVEKTAMECGEYSHTRFWRGGVFTNANVQFGAVTRLPDLCIFLNT 170 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + T+ A+++ ++ IP V Sbjct: 171 LSNVLTQHS--------------------------------------AVKDCAKMAIPTV 192 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +VDTN NP+L+ Y +PGNDD+ +IAL+C L SA + G A+ Sbjct: 193 GIVDTNCNPNLITYPVPGNDDTPAAIALYCKLFKSAILLGKAK 235 >gi|322785450|gb|EFZ12121.1| hypothetical protein SINV_06769 [Solenopsis invicta] Length = 266 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 38/220 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ N ME +IF R IIDL QT +L++AL + R Sbjct: 74 FTVKDLYDARVHYGHKETSLNEHMETFIFGSRLGHLIIDLDQTAELLRQALNFTAHIAFR 133 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF++ Q + V + A+ +Y W G+ N + ++ +L DL L Sbjct: 134 GGIILFISRNPQVTHLVDKTARECKEYSQTRFWRHGLFPNSRNQFKATTRLPDLCIFL-- 191 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 G L +M E A++ A ++ IP V Sbjct: 192 ------------------------------GTLDTVM------SEHKAVRHAAKMCIPSV 215 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN NP+L+ Y +PGNDDS +I L+C L A + G Sbjct: 216 GIVDTNCNPNLITYPVPGNDDSPCAIELYCSLFKEAIMRG 255 >gi|83745517|gb|ABC42458.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6509] Length = 165 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 7/167 (4%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI ER + HII+L++T L +A ++ +RG + L V T +D V + Sbjct: 2 WNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKIRADLVEQ 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIER 140 AA ++ + VN KW GG +TNW +Q+ R+ L+ ++ G KK+ ++R Sbjct: 62 AAIKAQCHFVNKKWTGGTLTNWSITEARLQQFRN---LIIEQKAGRLDCLPKKDAAVVKR 118 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 119 QLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|150866063|ref|XP_001385536.2| hypothetical protein PICST_32903 [Scheffersomyces stipitis CBS 6054] gi|149387319|gb|ABN67507.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 421 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 19/222 (8%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +I L+ +G GH W P + +I+ E + H+IDL++T L++A VI Sbjct: 182 LKDVSIATLMAAGCHLGHSKSNWRPTTQPFIYGEYDGIHLIDLNETAAALKRASNVIKGV 241 Query: 63 VARGGRILFVATKSQA--SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +GG IL+V T + + EAA RS Y V +W+ G +TN+ V++ IQ + +E Sbjct: 242 SKKGGIILYVGTSKNVFQNRALEEAAIRSNGYYVTKRWIPGTITNYTEVTKQIQGTQKIE 301 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ EN+ + N+ ++ +L + PDL+ +++ + I E Sbjct: 302 --VDMENKPTGR----NLGVEQGQLVK-----------PDLVVILNPVENRNCINECILS 344 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 R+P + + DT+ P L+ Y IP NDDS RS+ +++ +A Sbjct: 345 RVPTIGLCDTDMEPSLLTYPIPCNDDSVRSVTFMTGILSKSA 386 >gi|262317677|dbj|BAI48206.1| 30S ribosomal protein S2 [Typhonium blumei] Length = 145 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 +L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HLLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|259481136|tpe|CBF74389.1| TPA: 40S ribosomal protein S2, putative (AFU_orthologue; AFUA_1G06570) [Aspergillus nidulans FGSC A4] Length = 332 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 23/226 (10%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL + GH WNP+ RYIF R HII L T L++A +V+ + AR Sbjct: 103 ITLELLLANQTHLGHSTSRWNPQNSRYIFGIREGIHIISLDITAAYLRRAAKVVEEVAAR 162 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF T+ V+ AA+ S Y + +W+ G +TN E++L Sbjct: 163 GGLILFAGTRPGQKRIVVRAAELSKGYHIFERWIPGSLTNG-------------EQIL-- 207 Query: 126 ENQGFTKKERLNI-ERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRLRIP 183 G +K+ +N+ + + LK +L D L PDL+ ++ + + E +P Sbjct: 208 ---GHCEKKVVNVLDEELPDLKESLA---DHAILKPDLVICLNPLENEPLLHECGLNNVP 261 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 262 TIGIIDTDADPTRVTYPIPANDDSLRSVAVIAGVLGRAGQAGQKRR 307 >gi|327357616|gb|EGE86473.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis ATCC 18188] Length = 393 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 19/220 (8%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 155 ITLELLLASQTHLGHATSLWNPANAEYIFGIRQGVHIISLDVTAAYLRRAAKVVREVARH 214 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+R+ V +W+ G +TN + + +K +++N Sbjct: 215 GGLILFVGTRKGQRRIVVSAAERAKGCHVFQRWIPGSLTNSEQILGHCEK-----QVVNA 269 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ E + ++L AL PDL+ ++ + + E IP + Sbjct: 270 FDEPLP-----GYEAQLEQLP-ALK--------PDLVVCLNPLENRPLLHECGLHTIPTI 315 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT++NP V Y IP NDDS RS+A+ ++ A DG Sbjct: 316 GIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDG 355 >gi|325088913|gb|EGC42223.1| mitochondrial ribosomal protein subunit S2 [Ajellomyces capsulatus H88] Length = 393 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 21/221 (9%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 153 ITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVARN 212 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+R+ V +W+ G +TN E++L Sbjct: 213 GGLILFVGTRKGQRRIVVNAAERAKGCHVFQRWIPGSLTNS-------------EQIL-- 257 Query: 126 ENQGFTKKERLN-IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K+ +N + + LD + + PDL+ ++ + + E IP Sbjct: 258 ---GHCGKQVVNAFDEPLPGYEAQLDALPALK--PDLVVCLNPLENRPLLHECGLHVIPT 312 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + V+DT++NP V Y IP NDDS RS+A+ ++ A DG Sbjct: 313 IGVIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDG 353 >gi|303316726|ref|XP_003068365.1| 37S ribosomal protein MRP4, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108046|gb|EER26220.1| 37S ribosomal protein MRP4, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] Length = 330 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 21/225 (9%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 L T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + Sbjct: 95 GLSDITLELLLASQSHLGHATSLWNPRNSSYIFGIRDGIHIISLEVTAAYLRRAAKVVEE 154 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 RGG ILFV T+ V+ AA+ + Y V +W+ G +TN + + + L+ ++E Sbjct: 155 VARRGGLILFVGTRKGQRRAVVRAAELAQGYHVFERWVPGSITNGQQILGHCE-LKVVDE 213 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRL 180 N +L R + + + L PDL+ ++ + + E R Sbjct: 214 FDN-------------------ELPRYKENVSEQPVLRPDLVVCLNPIENEPLLTECRAY 254 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + ++DT+++ +V Y IP NDDS RS+A+ ++ A G Sbjct: 255 NIPTIGIIDTDADALMVTYPIPANDDSLRSVAVIAGVLGRAGEAG 299 >gi|296399411|gb|ADH10530.1| mitochondrial ribosomal protein S2 [Zonotrichia albicollis] Length = 239 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 38 FTLKDLFDARVHLGHKKGCRHRFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 97 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A+ +Y W GG++TN +L DL L+ Sbjct: 98 GGIILFVSRRRQFCHLVESTARACGEYAHTRYWQGGLLTNAHIQFGPGVRLPDLLIFLST 157 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +AI++A ++ IP V Sbjct: 158 LNNVF--------------------------------------EPHVAIRDAAKMNIPTV 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 VVDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 180 GVVDTNCNPCLITYPIPGNDDSPAAVELYCRL 211 >gi|157119238|ref|XP_001653316.1| 30S ribosomal protein S2 (prokaryotic and organellar) [Aedes aegypti] gi|108875414|gb|EAT39639.1| 30S ribosomal protein S2 (prokaryotic and organellar) [Aedes aegypti] Length = 239 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 38/223 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ + GH+ + M+ Y+F R IIDL +T L+ AL V + R Sbjct: 47 FTVEDLFKAKIHLGHKEGTLHNNMKGYLFGSRLGHCIIDLDKTAEYLRLALNVTAHVAYR 106 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF +Q V + A +Y W GG+ TN ++ +L DL LN Sbjct: 107 GGVILFFNRSAQNGHIVEKTAMECGEYSHTRFWRGGVFTNANVQFGAVTRLPDLCIFLNT 166 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N I +M A++++ ++ IP + Sbjct: 167 QNN-----------------------ILEM---------------HTAVKDSAKMSIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +VD+N NP+L+ Y +PGNDD+ +I L+C L SA + G A+ Sbjct: 189 GIVDSNCNPNLITYPVPGNDDTPSAIELYCKLFKSAVLLGKAK 231 >gi|67528027|ref|XP_661855.1| hypothetical protein AN4251.2 [Aspergillus nidulans FGSC A4] gi|40739729|gb|EAA58919.1| hypothetical protein AN4251.2 [Aspergillus nidulans FGSC A4] Length = 331 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 23/226 (10%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL + GH WNP+ RYIF R HII L T L++A +V+ + AR Sbjct: 103 ITLELLLANQTHLGHSTSRWNPQNSRYIFGIREGIHIISLDITAAYLRRAAKVVEEVAAR 162 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF T+ V+ AA+ S Y + +W+ G +TN E++L Sbjct: 163 GGLILFAGTRPGQKRIVVRAAELSKGYHIFERWIPGSLTNG-------------EQIL-- 207 Query: 126 ENQGFTKKERLNI-ERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRLRIP 183 G +K+ +N+ + + LK +L D L PDL+ ++ + + E +P Sbjct: 208 ---GHCEKKVVNVLDEELPDLKESLA---DHAILKPDLVICLNPLENEPLLHECGLNNVP 261 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 262 TIGIIDTDADPTRVTYPIPANDDSLRSVAVIAGVLGRAGQAGQKRR 307 >gi|261206232|ref|XP_002627853.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis SLH14081] gi|239592912|gb|EEQ75493.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis SLH14081] Length = 371 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 19/220 (8%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 133 ITLELLLASQTHLGHATSLWNPANAEYIFGIRQGVHIISLDVTAAYLRRAAKVVREVARH 192 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+R+ V +W+ G +TN + + +K +++N Sbjct: 193 GGLILFVGTRKGQRRIVVSAAERAKGCHVFQRWIPGSLTNSEQILGHCEK-----QVVNA 247 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ E + ++L AL PDL+ ++ + + E IP + Sbjct: 248 FDEPLP-----GYEAQLEQLP-ALK--------PDLVVCLNPLENRPLLHECGLHTIPTI 293 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DT++NP V Y IP NDDS RS+A+ ++ A DG Sbjct: 294 GIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDG 333 >gi|74179397|dbj|BAE44055.1| ribosomal protein S2 [Symplocarpus foetidus] gi|74179403|dbj|BAE44059.1| ribosomal protein S2 [Symplocarpus nabekuraensis] Length = 150 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 85/141 (60%), Gaps = 3/141 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFNAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLK 146 N+ K++ ++R+ LK Sbjct: 130 INR-LPKRDAAMLKRQLSTLK 149 >gi|307205969|gb|EFN84095.1| 28S ribosomal protein S2, mitochondrial [Harpegnathos saltator] Length = 255 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 38/220 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L + V +GH+ L + ME +IF R IIDL QT +L++AL I+ R Sbjct: 60 FTVKDLYNARVHYGHKETLLHKNMETFIFGSRMGHLIIDLDQTAELLRQALNFIAHIAFR 119 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q + V + AK ++ W G+ N ++I +L DL LN Sbjct: 120 DGIILFISRNPQTTYLVDKTAKECKEFSHTRYWRKGIFPNSTNQFKTITRLPDLCIFLNT 179 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + E + A ++ IP V Sbjct: 180 LDTAMS--------------------------------------EHTGVAHAAKMCIPSV 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN NP+L+ Y IPGNDDS +I L+C L A + G Sbjct: 202 GIVDTNCNPNLITYPIPGNDDSLCAIELYCSLFKEAILRG 241 >gi|289618930|emb|CBI54535.1| unnamed protein product [Sordaria macrospora] Length = 433 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 21/224 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ L+ + GH LWNP RYI+ R HII L T L++A +V+ + RG Sbjct: 166 SLEDLMAAQAHMGHNTSLWNPANARYIYGVRQGIHIISLETTSIHLRRAARVVEEVAYRG 225 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ V+ AA+ + + +KW G +TN + + + L ++E L++ Sbjct: 226 GLILFVGTRPGQRPIVVRAAEMAKACHLFTKWRPGTITNREQLLGGV-PLTVVDE-LDRP 283 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRLRIPIV 185 QGF D + D L PDL+ ++ + E +IP + Sbjct: 284 LQGFE------------------DHLHDRRPLAPDLVVCLNPKENMTLLYECSLAKIPTI 325 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++DTN+NP V Y IP NDDS R+ AL ++ A G R+ Sbjct: 326 GIIDTNTNPSWVTYQIPANDDSLRATALISGVLGRAGEHGQKRR 369 >gi|255727016|ref|XP_002548434.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134358|gb|EER33913.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 475 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 119/223 (53%), Gaps = 22/223 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI +L+ +G GH + M+ +I+ + HIIDL++T+ L A +VI V +G Sbjct: 231 TIAKLMAAGCHLGHATSSFRASMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIEGVVEKG 290 Query: 67 GRILFVAT---KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G +L+V T S + +++A++RS Y VN +W+ G +TN+ +++ +++ Sbjct: 291 GIVLYVGTYKNNSSIHEALIKASERSHGYYVNKRWIPGTITNYTEITKQYSQVKT----- 345 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K ++++ K+ ++K A I+ PDL+ +++ + I+E IP Sbjct: 346 ---------KVDIDMKEKQYEIKHAEKIIK-----PDLVVLLNPVENRNCIKECISACIP 391 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + + DT+ P L+ Y IP NDDS RS++L +++ +A G+ Sbjct: 392 TIGLCDTDMEPSLLTYPIPCNDDSVRSVSLMLGILSKSAETGL 434 >gi|74179400|dbj|BAE44057.1| ribosomal protein S2 [Symplocarpus nipponicus] Length = 150 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 85/141 (60%), Gaps = 3/141 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFNAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQKMGK 129 Query: 126 ENQGFTKKERLNIERKRDKLK 146 N+ K++ ++R+ LK Sbjct: 130 INR-LPKRDAAMLKRQLSTLK 149 >gi|320038180|gb|EFW20116.1| 40S ribosomal protein S2 [Coccidioides posadasii str. Silveira] Length = 330 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 21/221 (9%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + R Sbjct: 99 ITLELLLASQSHLGHATSLWNPRNSSYIFGIRDGIHIISLEVTAAYLRRAAKVVEEVARR 158 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+ + Y V +W+ G +TN + + + L+ ++E N Sbjct: 159 GGLILFVGTRKGQRRAVVRAAELAQGYHVFERWVPGSITNGQQILGHCE-LKVVDEFDN- 216 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGL-PDLMFVVDTNREKLAIQEARRLRIPI 184 +L R + + + L PDL+ ++ + + E R IP Sbjct: 217 ------------------ELPRYKENVSEQPVLRPDLVVCLNPIENEPLLTECRAYNIPT 258 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT+++ +V Y IP NDDS RS+A+ ++ A G Sbjct: 259 IGIIDTDADALMVTYPIPANDDSLRSVAVIAGVLGRAGEAG 299 >gi|262317698|dbj|BAI48220.1| 30S ribosomal protein S2 [Typhonium diversifolium] gi|262317701|dbj|BAI48222.1| 30S ribosomal protein S2 [Typhonium diversifolium] Length = 145 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T+ +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTMETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|225418690|ref|ZP_03761879.1| hypothetical protein CLOSTASPAR_05914 [Clostridium asparagiforme DSM 15981] gi|225041780|gb|EEG52026.1| hypothetical protein CLOSTASPAR_05914 [Clostridium asparagiforme DSM 15981] Length = 149 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 85/127 (66%), Gaps = 5/127 (3%) Query: 102 MMTNWKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGL 158 M+TN+KT+ I +L+ +E + ++ F KKE + ++++ DKL+R L GI+DM L Sbjct: 1 MLTNFKTIQSRIGRLKAIEAM--SQDGTFDVLPKKEVIALKKEWDKLERNLGGIKDMKRL 58 Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD +FVVD +E + +QEA L IP++ +VDTN +P+ +DYVIPGNDD+ R++ L + Sbjct: 59 PDAIFVVDPKKEHICVQEAHTLGIPLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSKM 118 Query: 219 ASAAIDG 225 A A I+ Sbjct: 119 ADAVIEA 125 >gi|74179394|dbj|BAE44053.1| ribosomal protein S2 [Lysichiton camtschatcensis] Length = 150 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 10/148 (6%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFNAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL + Sbjct: 70 HFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDL-----RAE 124 Query: 128 QGFTKKERLNIERKRDK--LKRALDGIR 153 Q K RL +KRD LKR L ++ Sbjct: 125 QKMGKINRL---QKRDAAMLKRQLSTLK 149 >gi|262317743|dbj|BAI48250.1| 30S ribosomal protein S2 [Biarum tenuifolium] gi|262317746|dbj|BAI48252.1| 30S ribosomal protein S2 [Biarum tenuifolium subsp. zeleborii] Length = 145 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWATTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|262317722|dbj|BAI48236.1| 30S ribosomal protein S2 [Typhonium giganteum] gi|262317725|dbj|BAI48238.1| 30S ribosomal protein S2 [Typhonium venosum] gi|262317731|dbj|BAI48242.1| 30S ribosomal protein S2 [Theriophonum sp. 'Yadav_Kerala'] gi|262317734|dbj|BAI48244.1| 30S ribosomal protein S2 [Arum cyrenaicum] gi|262317737|dbj|BAI48246.1| 30S ribosomal protein S2 [Arum hygrophilum] gi|262317740|dbj|BAI48248.1| 30S ribosomal protein S2 [Arum purpureospathum] gi|262317749|dbj|BAI48254.1| 30S ribosomal protein S2 [Helicodiceros muscivorus] Length = 145 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|154278449|ref|XP_001540038.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413623|gb|EDN09006.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 424 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 21/221 (9%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 184 ITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVARN 243 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+R+ V +W+ G +TN E++L Sbjct: 244 GGLILFVGTRKGQRRIVVNAAERAKGCHVFQRWIPGSLTNS-------------EQIL-- 288 Query: 126 ENQGFTKKERLN-IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K+ +N + + LD + + PDL+ ++ + + E IP Sbjct: 289 ---GHCGKQVVNAFDEPLPGYEAQLDALPALK--PDLVVCLNPLENRPLLHECGLHVIPT 343 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT++NP V Y IP NDDS RS+A+ ++ A DG Sbjct: 344 IGIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDG 384 >gi|262317704|dbj|BAI48224.1| 30S ribosomal protein S2 [Typhonium calcicola] gi|262317707|dbj|BAI48226.1| 30S ribosomal protein S2 [Typhonium horsfieldii] gi|262317710|dbj|BAI48228.1| 30S ribosomal protein S2 [Typhonium kungmingense] gi|262317713|dbj|BAI48230.1| 30S ribosomal protein S2 [Typhonium larsenii] gi|262317716|dbj|BAI48232.1| 30S ribosomal protein S2 [Typhonium omeiense] Length = 145 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|225560622|gb|EEH08903.1| mitochondrial ribosomal protein subunit S2 [Ajellomyces capsulatus G186AR] Length = 393 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 21/221 (9%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 153 ITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVARN 212 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ ++ AA+R+ V +W+ G +TN E++L Sbjct: 213 GGLILFVGTRKGQRRIIVNAAERAKGCHVFQRWIPGSLTNS-------------EQIL-- 257 Query: 126 ENQGFTKKERLN-IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G K+ +N + + LD + + PDL+ ++ + + E IP Sbjct: 258 ---GHCGKQVVNAFDEPLPGYEAQLDSLPALK--PDLVVCLNPLENRPLLHECGLHVIPT 312 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + V+DT++NP V Y IP NDDS RS+A+ ++ A DG Sbjct: 313 IGVIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDG 353 >gi|262317719|dbj|BAI48234.1| 30S ribosomal protein S2 [Typhonium hirsutum] Length = 145 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACGLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|159130880|gb|EDP55993.1| 40S ribosomal protein S2, putative [Aspergillus fumigatus A1163] Length = 344 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 19/223 (8%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + ARG Sbjct: 106 TLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVAARG 165 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++N Sbjct: 166 GLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTNGQQILGHCET-----KVVNAF 220 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++ + + L ++ K PDL+ + + + E +P + Sbjct: 221 DEELPEFKDLRTDQPAIK--------------PDLVVCFNPVENVVLLHECGLNNVPTIG 266 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 267 IIDTDADPTQVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKRR 309 >gi|70991114|ref|XP_750406.1| 40S ribosomal protein S2 [Aspergillus fumigatus Af293] gi|66848038|gb|EAL88368.1| 40S ribosomal protein S2, putative [Aspergillus fumigatus Af293] Length = 344 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 19/223 (8%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + ARG Sbjct: 106 TLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVAARG 165 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++N Sbjct: 166 GLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTNGQQILGHCET-----KVVNAF 220 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++ + + L ++ K PDL+ + + + E +P ++ Sbjct: 221 DEELPEFKDLRTDQPAIK--------------PDLVVCFNPVENVVLLHECGLNNVPTIS 266 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 267 IIDTDADPTQVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKRR 309 >gi|307174869|gb|EFN65147.1| 28S ribosomal protein S2, mitochondrial [Camponotus floridanus] Length = 197 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 50/246 (20%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ N ME +IF R + IIDL QT +L++AL I+ R Sbjct: 2 FTVKDLYDARVHYGHKITSMNQHMETFIFGSRLDHLIIDLDQTAELLRQALNFIAHVAFR 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q + V + AK ++ W G+ N K +++ +L DL L+ Sbjct: 62 DGIILFISRNPQTTYLVDKTAKECKEFSQTRYWRIGLFPNSKNQFKTMTRLPDLCIFLS- 120 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 LD + E A++ + ++ IP V Sbjct: 121 ----------------------TLDSVL---------------AEHPAVRHSAKMCIPSV 143 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +VDTN NP+L+ Y IPGNDDS +I L+C L A + G K A ET+ Sbjct: 144 GIVDTNCNPNLITYPIPGNDDSLCAIELYCSLFKEAILRG------------KKARETMT 191 Query: 246 HSKEGM 251 + KE + Sbjct: 192 NFKESI 197 >gi|262317671|dbj|BAI48202.1| 30S ribosomal protein S2 [Typhonium albidinervum] gi|262317674|dbj|BAI48204.1| 30S ribosomal protein S2 [Typhonium bulbiferum] gi|262317686|dbj|BAI48212.1| 30S ribosomal protein S2 [Typhonium gracile] gi|262317689|dbj|BAI48214.1| 30S ribosomal protein S2 [Typhonium roxburghii] gi|262317692|dbj|BAI48216.1| 30S ribosomal protein S2 [Typhonium trilobatum] gi|262317695|dbj|BAI48218.1| 30S ribosomal protein S2 [Typhonium sp. TOT-2009] Length = 145 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 +L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HLLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|126642363|ref|YP_001085347.1| 30S ribosomal protein S2 [Acinetobacter baumannii ATCC 17978] gi|126388247|gb|ABO12745.1| 30S ribosomal protein S2 [Acinetobacter baumannii ATCC 17978] Length = 108 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/100 (47%), Positives = 76/100 (76%), Gaps = 2/100 (2%) Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIP 202 +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ L IP++ +VDTNSNPD VDYVIP Sbjct: 2 EKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVIP 61 Query: 203 GNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 GNDD+ R++ L+ +A A + G ++++ A+ ++ G+ Sbjct: 62 GNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQAKGD 99 >gi|159502715|gb|ABW97534.1| ribosomal protein subunit 2 [Striga gesnerioides] Length = 140 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 1/140 (0%) Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKEN 127 L V T+ + +D V AA ++ + VN KWLGGM+TNW T + KLRDL E Sbjct: 1 FLIVGTQKKEADSVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHKLRDLRIEQRAGRL 60 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 K++ ++R+ +L+ L GI+ M LPD++ ++D +E A++E L IP + + Sbjct: 61 SRLPKRDAAVVKRQLSRLQTYLGGIKYMTRLPDVVIILDQRKEYTALRECITLGIPTICL 120 Query: 188 VDTNSNPDLVDYVIPGNDDS 207 +DTN +PDL D+ IP NDDS Sbjct: 121 IDTNCDPDLADFSIPANDDS 140 >gi|302916339|ref|XP_003051980.1| hypothetical protein NECHADRAFT_103997 [Nectria haematococca mpVI 77-13-4] gi|256732919|gb|EEU46267.1| hypothetical protein NECHADRAFT_103997 [Nectria haematococca mpVI 77-13-4] Length = 538 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 29/229 (12%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L+ S GH LWNP RYI+ R HII L T L++A +V+ + R Sbjct: 139 ITLELLMASQTHMGHSTSLWNPANSRYIYGVRQGIHIISLETTAAHLRRAARVVDEVAYR 198 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ + V +AA+ + + +KW G +TN RD+ +L Sbjct: 199 GGLILFVGTRKGQMEIVTKAAEMAGACHLFTKWTPGAITN-----------RDV--IL-- 243 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGG-----LPDLMFVVDTNREKLAIQEARRL 180 R+ + ++ + LDG G +PDL+ ++ + E Sbjct: 244 ---------RMAGTKVVNEKDQELDGFEKYRGSARPLMPDLVVCLNPLENYTLLYECGLK 294 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + V+DTN++P V Y IP NDDS R++A+ ++ A G R+ Sbjct: 295 SIPTIGVIDTNADPSWVTYTIPANDDSLRAMAVVGGVLGRAGQRGQQRR 343 >gi|262317767|dbj|BAI48266.1| 30S ribosomal protein S2 [Colocasia esculenta] gi|262317770|dbj|BAI48268.1| 30S ribosomal protein S2 [Remusatia vivipara] Length = 145 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|262317683|dbj|BAI48210.1| 30S ribosomal protein S2 [Typhonium flagelliforme] gi|262317752|dbj|BAI48256.1| 30S ribosomal protein S2 [Arisaema serratum] gi|262317755|dbj|BAI48258.1| 30S ribosomal protein S2 [Pinellia pedatisecta] gi|262317761|dbj|BAI48262.1| 30S ribosomal protein S2 [Alocasia cucullata] gi|262317764|dbj|BAI48264.1| 30S ribosomal protein S2 [Alocasia odora] Length = 145 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|302690908|ref|XP_003035133.1| hypothetical protein SCHCODRAFT_81331 [Schizophyllum commune H4-8] gi|300108829|gb|EFJ00231.1| hypothetical protein SCHCODRAFT_81331 [Schizophyllum commune H4-8] Length = 430 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 40/223 (17%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI LL +G FGH NP Y + R IIDL T+P+L++A Q RG Sbjct: 80 TISALLAAGAHFGHSTSRLNPNFMPYAYGTRGGITIIDLDHTLPLLRRATQFARSVAYRG 139 Query: 67 GRILFVATKSQASDCVMEAAKRSAQ---YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G+ILF+ T+ V +AA+R Y + +WL G +TN + +L Sbjct: 140 GQILFLGTRPDLRPVVQKAAERLGPGNGYYIADRWLPGTLTNRFS-------------ML 186 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ +R N+ LPDL+ +++ + +AI+E +P Sbjct: 187 NPDD-----FKRYNL-------------------LPDLVVLLNPIQNAVAIRELAVEHVP 222 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++D+N++P LV Y IP ND+S+R + +++ AA +G+ Sbjct: 223 TIGIIDSNADPRLVMYPIPANDESTRVAEIIAGVISIAAREGV 265 >gi|262317758|dbj|BAI48260.1| 30S ribosomal protein S2 [Pinellia tripartita] Length = 145 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|262317680|dbj|BAI48208.1| 30S ribosomal protein S2 [Typhonium cordifolium] Length = 145 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 2/122 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACNLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 +L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E+ + K Sbjct: 70 HLLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQRMGK 129 Query: 126 EN 127 N Sbjct: 130 LN 131 >gi|147899103|ref|NP_001085303.1| mitochondrial ribosomal protein S2 [Xenopus laevis] gi|133737010|gb|AAI33759.1| LOC443704 protein [Xenopus laevis] Length = 280 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 38/213 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 79 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 139 KGVILFVSRNRQFTHLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSS 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F + LAI++A ++ IP + Sbjct: 199 LNNVF--------------------------------------EQHLAIRDAAKMNIPTM 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +VDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 221 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLF 253 >gi|119496469|ref|XP_001265008.1| 40S ribosomal protein S2, putative [Neosartorya fischeri NRRL 181] gi|119413170|gb|EAW23111.1| 40S ribosomal protein S2, putative [Neosartorya fischeri NRRL 181] Length = 344 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 19/224 (8%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + AR Sbjct: 105 ITLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVAAR 164 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+ + Y + +W+ G +TN Q I D + ++N Sbjct: 165 GGLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTN----GQQILGHCDTK-VVNA 219 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ + + L ++ K PDL+ + + + E +P + Sbjct: 220 FDEELPEFKDLRTDQPAIK--------------PDLVVCFNPVENVVLLHECGLNNVPTI 265 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 266 GIIDTDADPTQVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKRR 309 >gi|296808653|ref|XP_002844665.1| 40S ribosomal protein mrp4 [Arthroderma otae CBS 113480] gi|238844148|gb|EEQ33810.1| 40S ribosomal protein mrp4 [Arthroderma otae CBS 113480] Length = 332 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 29/252 (11%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YI R HII L T L++A +V+ + Sbjct: 102 ITLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKVVQEVARV 161 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE----E 121 GG ILFV T+ V+ AA+ + V +W+ G +TN S+Q L+ E + Sbjct: 162 GGLILFVGTRKGHKRAVVRAAELAQGCHVFDRWVPGSLTN------SLQILQKCEVKLVD 215 Query: 122 LLNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L++E GF K I+ +R LK PDL+ + K +QE Sbjct: 216 ALDREVDYPGFQK-----IDPERAPLK------------PDLVVCFNPLENKPLLQECAS 258 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP + V+DT+++P V Y IP NDDS R I++ ++ A +G ++ A Sbjct: 259 MNIPTIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGEEGQKKRLEQSAAGDLP 318 Query: 240 AGETVVHSKEGM 251 V+ S++ M Sbjct: 319 YKPIVLQSQKDM 330 >gi|255942791|ref|XP_002562164.1| Pc18g03240 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586897|emb|CAP94548.1| Pc18g03240 [Penicillium chrysogenum Wisconsin 54-1255] Length = 348 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 19/225 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q ++ LL +G GH WNP+ RYIF R HII L T L++A +V+ + A Sbjct: 107 QISLEMLLAAGTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAHLRRAAKVVEEVAA 166 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILF T+ +++AA + Y + +W+ G +TN + + + + L+ Sbjct: 167 RGGLILFAGTRKGQKRAIVQAASLAKGYHIFERWIPGSLTNGEQILGHCET--KVVNALD 224 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E F K L R LK PDL+ ++ + + E +P Sbjct: 225 EELPDF--KSDLA---DRPSLK------------PDLVICLNPLENVVLLHECGLNNVPT 267 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + V+DT+++P V Y IP NDDS R+ L ++ A G R+ Sbjct: 268 IGVIDTDADPTRVTYPIPSNDDSLRATCLIAGILGRAGEAGQLRR 312 >gi|49257614|gb|AAH74242.1| LOC443704 protein [Xenopus laevis] Length = 277 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 38/213 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 76 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 136 KGVILFVSRNRQFTHLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSS 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F + LAI++A ++ IP + Sbjct: 196 LNNVF--------------------------------------EQHLAIRDAAKMNIPTM 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +VDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 218 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLF 250 >gi|262317728|dbj|BAI48240.1| 30S ribosomal protein S2 [Theriophonum dalzellii] Length = 145 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 2/123 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D +RG Sbjct: 10 LEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAASRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNK 125 L V TK++A+D V AA ++ + VN KWLGGM+TNW T ++K RDL E+ + K Sbjct: 70 HFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLKKFRDLRAEQRMGK 129 Query: 126 ENQ 128 N+ Sbjct: 130 LNR 132 >gi|157819459|ref|NP_001102046.1| 28S ribosomal protein S2, mitochondrial [Rattus norvegicus] gi|149039193|gb|EDL93413.1| mitochondrial ribosomal protein S2 (predicted), isoform CRA_b [Rattus norvegicus] Length = 291 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 136 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPTVRLPDLIVFLHT 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 196 LNNVF--------------------------------------ESHVAVRDAAKMNIPTV 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VDTN NP L+ Y IPGNDDS ++I LFC L Sbjct: 218 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKL 249 >gi|73967792|ref|XP_850391.1| PREDICTED: similar to mitochondrial ribosomal protein S2 [Canis familiaris] Length = 288 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 94/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L + V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 78 FSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTAVHLQLALNFTAHVAYR 137 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + S+ +L DL L+ Sbjct: 138 KGIILFVSRNRQFSHLIETTAQDCGEYAHTRYFKGGLLTNSSLLLGSMVRLPDLIIFLHT 197 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 198 LNNVF--------------------------------------EPHVAVRDAAKMHIPTV 219 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VDTN NP L+ Y IPGNDDS ++ LFC L Sbjct: 220 GIVDTNCNPCLITYPIPGNDDSPPAVHLFCRL 251 >gi|67677978|gb|AAH97661.1| Unknown (protein for IMAGE:6631538) [Xenopus laevis] Length = 274 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 38/213 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 73 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 132 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 133 KGVILFVSRNRQFTHLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGIRLPDLIIFLSS 192 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F + LAI++A ++ IP + Sbjct: 193 LNNVF--------------------------------------EQHLAIRDAAKMNIPTM 214 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +VDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 215 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLF 247 >gi|119608558|gb|EAW88152.1| mitochondrial ribosomal protein S2, isoform CRA_a [Homo sapiens] gi|119608559|gb|EAW88153.1| mitochondrial ribosomal protein S2, isoform CRA_a [Homo sapiens] Length = 319 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 102 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 161 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 162 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHT 221 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 222 LNNIF--------------------------------------EPHVAVRDAAKMNIPTV 243 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ L+C L +A Sbjct: 244 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTA 279 >gi|83745369|gb|ABC42396.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 159 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 5/160 (3%) Query: 27 PKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAA 86 PKM YI ER + HII+L++T L +A ++ +RG + L V TK + V +AA Sbjct: 1 PKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRSTVNLVEQAA 60 Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN---QGFTKKERLNIERKRD 143 K++ + VN KW GGM+TNW +QK +DL ++ +E KK+ ++R+ Sbjct: 61 KKAGCHFVNKKWTGGMLTNWSITKARLQKFKDL--IIEQEAGRIDCLPKKDAAVVKRQLS 118 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++ GIR+M LPD++ ++ N E A+QE L IP Sbjct: 119 HFQKNFGGIRNMSELPDIVIILCQNEEYKALQECITLGIP 158 >gi|114627491|ref|XP_001170748.1| PREDICTED: similar to CGI-91 protein isoform 1 [Pan troglodytes] Length = 254 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 37 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 96 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 97 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFKGGMLTNARLLFGPTVRLPDLIIFLHT 156 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 157 LNNIF--------------------------------------EPHVAVRDAAKMNIPTV 178 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ L+C L +A Sbjct: 179 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTA 214 >gi|194856293|ref|XP_001968718.1| GG24347 [Drosophila erecta] gi|190660585|gb|EDV57777.1| GG24347 [Drosophila erecta] Length = 264 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTALHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N T + A+++A ++ IP + Sbjct: 178 QNNVMT--------------------------------------QHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 VVDTN NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GVVDTNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|270610599|ref|ZP_06221688.1| ribosomal protein S2 [Haemophilus influenzae HK1212] gi|270318055|gb|EFA29320.1| ribosomal protein S2 [Haemophilus influenzae HK1212] Length = 110 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 74/110 (67%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQS 112 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QS Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQS 110 >gi|7705805|ref|NP_057118.1| 28S ribosomal protein S2, mitochondrial [Homo sapiens] gi|24212389|sp|Q9Y399|RT02_HUMAN RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|4929651|gb|AAD34086.1|AF151849_1 CGI-91 protein [Homo sapiens] gi|14124982|gb|AAH08017.1| Mitochondrial ribosomal protein S2 [Homo sapiens] gi|15080676|dbj|BAB62529.1| mitochondrial ribosomal protein S2 [Homo sapiens] gi|15341861|gb|AAH13108.1| Mitochondrial ribosomal protein S2 [Homo sapiens] gi|55958122|emb|CAI14047.1| mitochondrial ribosomal protein S2 [Homo sapiens] Length = 296 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 79 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 139 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHT 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 199 LNNIF--------------------------------------EPHVAVRDAAKMNIPTV 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ L+C L +A Sbjct: 221 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTA 256 >gi|153820504|ref|ZP_01973171.1| ribosomal protein S2 [Vibrio cholerae NCTC 8457] gi|126508951|gb|EAZ71545.1| ribosomal protein S2 [Vibrio cholerae NCTC 8457] Length = 107 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 47/86 (54%), Positives = 67/86 (77%) Query: 140 RKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDY 199 R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ AVVDTNS+PD VDY Sbjct: 4 REMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVDTNSSPDGVDY 63 Query: 200 VIPGNDDSSRSIALFCDLVASAAIDG 225 +IPGNDD+ R++ L+ + A A +G Sbjct: 64 IIPGNDDAIRAVQLYLNAAAQAINEG 89 >gi|320590958|gb|EFX03399.1| 40S ribosomal protein [Grosmannia clavigera kw1407] Length = 390 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 23/219 (10%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L+ S GH LWNP RY+ R+ H+I L QT L++A +V+ + R Sbjct: 133 VTLELLMASQTHMGHHTSLWNPANARYVLGVRSGVHVIALEQTAAHLRRAARVVEEVAYR 192 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV T+ D V+ AA+ + + +KW G +TN RD ++L Sbjct: 193 AGLILFVGTRRGQMDIVVRAAELADGCHLFTKWTAGTITN-----------RD--QIL-- 237 Query: 126 ENQGFTKKERLNIERKRDKLKRALDG-IRDMGGL-PDLMFVVDTNREKLAIQEARRLRIP 183 +K L I + D DG + D+ L PDL+ V++ + + E +P Sbjct: 238 ------RKAALRIVDENDVETDGGDGLVSDLRPLVPDLVVVLNPLENHVLLHECAMATVP 291 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 + V+DT+++P V Y IP NDDS RS+ + ++ A Sbjct: 292 TIGVIDTDADPARVTYAIPANDDSLRSVGVIAGVLGRAG 330 >gi|332833303|ref|XP_520354.3| PREDICTED: 28S ribosomal protein S2, mitochondrial isoform 3 [Pan troglodytes] Length = 319 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 102 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATRLQLALNFTAHMAYR 161 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 162 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFKGGMLTNARLLFGPTVRLPDLIIFLHT 221 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 222 LNNIF--------------------------------------EPHVAVRDAAKMNIPTV 243 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ L+C L +A Sbjct: 244 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTA 279 >gi|193643449|ref|XP_001946401.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Acyrthosiphon pisum] Length = 264 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 46/222 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+ L E+GV FGH + +M++Y++ R IIDL+ T +LQ+AL V + RGG Sbjct: 66 IKSLFEAGVHFGHTEGTLDNRMKQYLYGNRLGHLIIDLNHTKRLLQQALNVTAHISYRGG 125 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN--- 124 ILF+ V AK ++ W GM TN + +S +L DL +LN Sbjct: 126 VILFLCQSPLNCLTVENCAKECGEFAHTRYWRDGMFTNSSRIFKSETRLPDLCIVLNTLS 185 Query: 125 ---KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K N G + + +A ++ Sbjct: 186 STSKNNSG----------------------------------------QHSVLSDAAKML 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP +A+VDT++NP++V Y IPGNDD+ +I L+CDL + + Sbjct: 206 IPTIAIVDTDANPNIVTYPIPGNDDTPSAINLYCDLFKNVIL 247 >gi|326930483|ref|XP_003211376.1| PREDICTED: hypothetical protein LOC100545851 [Meleagris gallopavo] Length = 1577 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 99/216 (45%), Gaps = 46/216 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 1365 FSLKDLFDARVHLGHKKGCRHQFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 1424 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q V A+ +Y W GG++TN IQ Sbjct: 1425 KGIILFVSRNRQFCHLVESTARECGEYAHTRYWQGGLLTNAH-----IQ----------- 1468 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLM-FVVDTN---REKLAIQEARRLR 181 F GIR LPDL+ F+ N +AI++A ++ Sbjct: 1469 ----FGP------------------GIR----LPDLLIFLSSLNNVFEPHVAIRDAAKMN 1502 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 IP V VVDTN NP L+ Y IPGNDDS S+ L+C L Sbjct: 1503 IPTVGVVDTNCNPCLITYPIPGNDDSPTSMELYCKL 1538 >gi|115628630|ref|XP_787912.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115972808|ref|XP_001184550.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 253 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 38/220 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT +L ES V GH+ L + +M++Y+ R I+DL QT P+L AL ++ R Sbjct: 60 FTRTELFESRVHLGHKEGLLDQRMKKYMIGTRREQCIMDLDQTTPLLNSALNFTANIAYR 119 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV Q + V E A+ +Y W G TN + +L DL LN Sbjct: 120 NGIILFVNRVPQFAHAVEEMARACGEYAHTRHWQKGCFTNAQIQMGPGTRLPDLIIFLNT 179 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F++ + A+ +A ++ IP + Sbjct: 180 LNDVFSQHQ--------------------------------------AVIDAAKMNIPTI 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVD+N NP+L+ Y IPGNDD+ ++ LF L + + G Sbjct: 202 AVVDSNCNPNLITYPIPGNDDTPVAVELFMRLFKESVLLG 241 >gi|317142602|ref|XP_001818975.2| 40S ribosomal protein S2 [Aspergillus oryzae RIB40] Length = 468 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 23/225 (10%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH WNP+ RYIF R+ H+I L T L++A +V+ + ARG Sbjct: 156 TLELLLASQTHLGHSTSRWNPQNSRYIFGIRDGIHVISLDVTAAYLRRAAKVVEEVAARG 215 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQK--LRDLEELLN 124 G ILFV T+ V+ AA+ + Y + +W+ G +TN + + + + ++E + Sbjct: 216 GLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCETKVVNAMDEEIP 275 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K + + L PDL+ ++ + + E +P Sbjct: 276 KYREALADRSVLK---------------------PDLVVCLNPLENVVLLHECGLNNVPT 314 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + V+DT+++P V Y IP NDDS R+I + ++ A G R+ Sbjct: 315 IGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGVLGRAGEAGQQRR 359 >gi|238501438|ref|XP_002381953.1| 40S ribosomal protein S2, putative [Aspergillus flavus NRRL3357] gi|220692190|gb|EED48537.1| 40S ribosomal protein S2, putative [Aspergillus flavus NRRL3357] Length = 472 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 23/225 (10%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH WNP+ RYIF R+ H+I L T L++A +V+ + ARG Sbjct: 160 TLELLLASQTHLGHSTSRWNPQNSRYIFGIRDGIHVISLDVTAAYLRRAAKVVEEVAARG 219 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQK--LRDLEELLN 124 G ILFV T+ V+ AA+ + Y + +W+ G +TN + + + + ++E + Sbjct: 220 GLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCETKVVNAMDEEIP 279 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K + + L PDL+ ++ + + E +P Sbjct: 280 KYREALADRSVLK---------------------PDLVVCLNPLENVVLLHECGLNNVPT 318 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + V+DT+++P V Y IP NDDS R+I + ++ A G R+ Sbjct: 319 IGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGVLGRAGEAGQQRR 363 >gi|260593696|ref|NP_536700.3| 28S ribosomal protein S2, mitochondrial isoform 1 [Mus musculus] gi|24212377|sp|Q924T2|RT02_MOUSE RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|15080678|dbj|BAB62530.1| mitochondrial ribosomal protein S2 [Mus musculus] gi|26346080|dbj|BAC36691.1| unnamed protein product [Mus musculus] gi|38051922|gb|AAH60503.1| Mitochondrial ribosomal protein S2 [Mus musculus] gi|74139196|dbj|BAE38484.1| unnamed protein product [Mus musculus] gi|74152224|dbj|BAE32396.1| unnamed protein product [Mus musculus] gi|123857711|emb|CAM24087.1| mitochondrial ribosomal protein S2 [Mus musculus] Length = 291 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 136 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 196 LNNVF--------------------------------------EPHVAVRDAAKMNIPTV 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VDTN NP L+ Y IPGNDDS ++I LFC L Sbjct: 218 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKL 249 >gi|148676435|gb|EDL08382.1| mitochondrial ribosomal protein S2, isoform CRA_a [Mus musculus] Length = 337 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 122 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 181 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 182 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 241 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 242 LNNVF--------------------------------------EPHVAVRDAAKMNIPTV 263 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VDTN NP L+ Y IPGNDDS ++I LFC L Sbjct: 264 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKL 295 >gi|26341776|dbj|BAC34550.1| unnamed protein product [Mus musculus] Length = 291 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 136 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 196 LNNVF--------------------------------------EPHVAVRDAAKMNIPTV 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VDTN NP L+ Y IPGNDDS ++I LFC L Sbjct: 218 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKL 249 >gi|332021375|gb|EGI61747.1| 28S ribosomal protein S2, mitochondrial [Acromyrmex echinatior] Length = 235 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 38/220 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ N ME +IF R IIDL QT +L++AL + R Sbjct: 40 FTVKDLYDARVHYGHKETSLNEHMETFIFGSRLGHLIIDLDQTAELLRQALNFTAHIAFR 99 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF++ Q V + AK ++ W G+ N + ++ +L DL L+ Sbjct: 100 GGIILFISRNPQVMHLVDKTAKECKEFSQTRFWRQGLFPNSRNQFKATTRLPDLCIFLS- 158 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 LD + E +A++ ++ IP V Sbjct: 159 ----------------------TLDTVM---------------AEHVAVRHTAKMCIPSV 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN NP+L+ Y +PGNDDS +I L+C L A + G Sbjct: 182 GIVDTNCNPNLITYPVPGNDDSLCAIQLYCSLFKEAIMRG 221 >gi|83745317|gb|ABC42370.1| ribosomal protein subunit 2 [Orobanche minor] Length = 155 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 88/153 (57%), Gaps = 3/153 (1%) Query: 27 PKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAA 86 PKM YI R HI +L +T L +A ++ D +RG + L V TK + ++ V AA Sbjct: 2 PKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVACAA 61 Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKRDK 144 K++ +CVN KWLGG +TNW T + + RDL E+ + + + K++ +R+ + Sbjct: 62 KKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKR-LPKRDAAVSKRQLSR 120 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 L+ + GI+ M GLPD++ +VD + E A++E Sbjct: 121 LQTYMGGIKYMTGLPDIVIIVDQHEEYTALREC 153 >gi|148235576|ref|NP_001089112.1| hypothetical protein LOC733351 [Xenopus laevis] gi|115292090|gb|AAI22476.1| LOC733351 protein [Xenopus laevis] Length = 282 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 46/216 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 81 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 140 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN V + Sbjct: 141 KGIILFVSRNRQFTYLIESTAKDCGEYAHTRYWQGGLLTN-APVQYGV------------ 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLR 181 G+R LPDL+ + T + +AI++A ++ Sbjct: 188 -------------------------GVR----LPDLIIFLSTLNNVFEQHMAIRDAAKMN 218 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 IP + +VDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 219 IPTMGIVDTNCNPSLITYPIPGNDDSPPAMELYCRL 254 >gi|83766833|dbj|BAE56973.1| unnamed protein product [Aspergillus oryzae] Length = 424 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 23/225 (10%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH WNP+ RYIF R+ H+I L T L++A +V+ + ARG Sbjct: 112 TLELLLASQTHLGHSTSRWNPQNSRYIFGIRDGIHVISLDVTAAYLRRAAKVVEEVAARG 171 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQK--LRDLEELLN 124 G ILFV T+ V+ AA+ + Y + +W+ G +TN + + + + ++E + Sbjct: 172 GLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCETKVVNAMDEEIP 231 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K + + L PDL+ ++ + + E +P Sbjct: 232 KYREALADRSVLK---------------------PDLVVCLNPLENVVLLHECGLNNVPT 270 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + V+DT+++P V Y IP NDDS R+I + ++ A G R+ Sbjct: 271 IGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGVLGRAGEAGQQRR 315 >gi|260593698|ref|NP_001159503.2| 28S ribosomal protein S2, mitochondrial isoform 2 [Mus musculus] Length = 272 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 57 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 116 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 117 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 176 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 177 LNNVF--------------------------------------EPHVAVRDAAKMNIPTV 198 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VDTN NP L+ Y IPGNDDS ++I LFC L Sbjct: 199 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKL 230 >gi|72009567|ref|XP_780586.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974978|ref|XP_001186467.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 267 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 98/220 (44%), Gaps = 38/220 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT +L ES V GH+ L + +M++Y+ R I+DL QT P+L AL ++ R Sbjct: 74 FTRTELFESRVHLGHKEGLLDQRMKKYMIGTRREQCIMDLDQTTPLLNSALNXTANIAYR 133 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV Q + V E A+ +Y W G TN + +L DL LN Sbjct: 134 NGIILFVNRVPQFAHAVEEMARACGEYAHTRHWQKGCFTNAQIQMGPGTRLPDLIIFLNT 193 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F++ + A+ +A ++ IP + Sbjct: 194 LNDVFSQHQ--------------------------------------AVVDAAKMNIPTI 215 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 AVVD+N NP+L+ Y IPGNDD+ ++ LF L + + G Sbjct: 216 AVVDSNCNPNLITYPIPGNDDTPVAVELFMRLFKESVLLG 255 >gi|76780354|gb|AAI06456.1| LOC733351 protein [Xenopus laevis] Length = 278 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 46/216 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 77 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 136 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN V + Sbjct: 137 KGIILFVSRNRQFTYMIESTAKDCGEYAHTRYWQGGLLTN-APVQYGV------------ 183 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLR 181 G+R LPDL+ + T + +AI++A ++ Sbjct: 184 -------------------------GVR----LPDLIIFLSTLNNVFEQHMAIRDAAKMN 214 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 IP + +VDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 215 IPTMGIVDTNCNPSLITYPIPGNDDSPPAMELYCRL 250 >gi|114627493|ref|XP_001170860.1| PREDICTED: similar to CGI-91 protein isoform 2 [Pan troglodytes] Length = 304 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 87 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 146 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 147 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFKGGMLTNARLLFGPTVRLPDLIIFLHT 206 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 207 LNNIF--------------------------------------EPHVAVRDAAKMNIPTV 228 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ L+C L +A Sbjct: 229 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTA 264 >gi|55958121|emb|CAI14046.1| mitochondrial ribosomal protein S2 [Homo sapiens] Length = 270 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 93 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 152 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 153 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHT 212 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 213 LNNIF--------------------------------------EPHVAVRDAAKMNIPTV 234 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ L+C L +A Sbjct: 235 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTA 270 >gi|322708061|gb|EFY99638.1| 37S ribosomal protein MRP4 [Metarhizium anisopliae ARSEF 23] Length = 484 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 102/230 (44%), Gaps = 29/230 (12%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ L+ S GH LWNP RYI+ R HII L L++A +V+ + Sbjct: 147 HVSLELLMASQAHMGHNTSLWNPANSRYIYGVRQGIHIISLETIAAHLRRAARVVEEVSY 206 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV T+ + V +AA+ + + +KW G +TN RD+ +L Sbjct: 207 RGGVILFVGTRKGQMEIVTKAAELAGACHLFTKWTPGAITN-----------RDV--ILK 253 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGG-----LPDLMFVVDTNREKLAIQEARR 179 + D L LDG G LPDL+ ++ + E Sbjct: 254 TQATKVV-----------DHLDSELDGFDMYKGMARPLLPDLVVCLNPLENYTMLYECGL 302 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + V+DTN +P V Y IP NDDS R++A+ ++ A G R+ Sbjct: 303 KNIPTIGVIDTNVDPSWVTYTIPANDDSLRAMAVVAGVLGRAGQKGKERR 352 >gi|322697496|gb|EFY89275.1| 37S ribosomal protein MRP4 precursor [Metarhizium acridum CQMa 102] Length = 484 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 29/224 (12%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L+ S GH LWNP RYI+ R HII L L++A +V+ + RGG IL Sbjct: 153 LMASQAHMGHNTSLWNPANSRYIYGVRQGIHIISLETIAAHLRRAARVVEEVSYRGGVIL 212 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 FV T+ + V +AA+ + + +KW G +TN RD+ +L + Sbjct: 213 FVGTRKGQMEIVTKAAELAGACHLFTKWTPGAITN-----------RDV--ILKTQPTKV 259 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGG-----LPDLMFVVDTNREKLAIQEARRLRIPIV 185 D L LDG G LPDL+ ++ + E IP + Sbjct: 260 V-----------DHLDSELDGFDMYKGMARPLLPDLVVCLNPLENYTMLYECGLKNIPTI 308 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 V+DTN +P V Y IP NDDS R++A+ ++ A G R+ Sbjct: 309 GVIDTNVDPSWVTYTIPANDDSLRAMAVVAGVLGRAGQKGKERR 352 >gi|195437396|ref|XP_002066626.1| GK24593 [Drosophila willistoni] gi|194162711|gb|EDW77612.1| GK24593 [Drosophila willistoni] Length = 275 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L+ AL ++ R Sbjct: 67 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTAAHLRDALNFVAHIAFR 126 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 127 DGIILFFNRNALNSHLVEQKALEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 186 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP V Sbjct: 187 QNNVLS--------------------------------------QHTAVRDAAKMAIPTV 208 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G ++ +G Sbjct: 209 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRKRRELLG 257 >gi|83745519|gb|ABC42459.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6509] Length = 165 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 7/167 (4%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI ER + HII+L++T L +A ++ +RG + L V T +D V + Sbjct: 2 WNPKMAPYISTERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKIRADLVEQ 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIER 140 AA ++ + VN KW GG +TNW +QK R+ L+ ++ G KK+ ++R Sbjct: 62 AAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLPKKDAAVVKR 118 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + + ++ GI+ M GLPD++ ++ N E A+QE L IP + + Sbjct: 119 QLSRFQKNRGGIKYMRGLPDIIIILVQNEEYKALQECINLGIPTICL 165 >gi|256090197|ref|XP_002581095.1| 30S ribosomal protein S2 [Schistosoma mansoni] gi|238666909|emb|CAZ37334.1| 30S ribosomal protein S2 (prokaryotic and organellar), putative [Schistosoma mansoni] Length = 255 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 46/222 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + L ++ V GHR+ L N M+ YI+ R IIDL QT ++ AL + R G Sbjct: 58 VTDLFQARVHLGHRSVLRNEYMKPYIYGCRQGIDIIDLQQTCSLMFDALNFAAHIAYRQG 117 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILF+ Q + + A+ +Y KW GG+ TN V Sbjct: 118 IILFMHQNKQMLPLIEKTAENIGEYSHCRKWEGGVFTNSSDVFH---------------- 161 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLRIP 183 D +R LPDL+ + T +R A+++A ++ IP Sbjct: 162 ----------------------DSVR----LPDLILFLSTCNSISRPHSAVRDAAKMLIP 195 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + VVDTNS+P L+ Y +PGNDDS ++ LFC L A A G Sbjct: 196 TIGVVDTNSDPRLISYPVPGNDDSPTAVRLFCALFAEAITRG 237 >gi|313623502|gb|EFR93697.1| ribosomal protein S2 [Listeria innocua FSL J1-023] Length = 133 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 46/95 (48%), Positives = 71/95 (74%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ +VD Sbjct: 13 LPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVD 72 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 TN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 73 TNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 107 >gi|255588273|ref|XP_002534555.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] gi|223525048|gb|EEF27828.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] Length = 384 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 71/112 (63%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++++GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 254 VQEMMKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRK 313 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RDL Sbjct: 314 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDL 365 >gi|328850536|gb|EGF99699.1| hypothetical protein MELLADRAFT_40132 [Melampsora larici-populina 98AG31] Length = 240 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 24/236 (10%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L+ + GH L +P I+ R+N IIDL QT+ L +A VI +TV + Sbjct: 14 LTLSTLISASSHLGHNKSLSSPISYPLIYGTRSNISIIDLRQTLSYLHRACNVIRETVEK 73 Query: 66 GGRILFVATKSQASDCVMEAAKR--SAQYCV-------NSKWLGGMMTNWKTV---SQSI 113 G +LF D + A++R S Y + N W+ G +TN V + + Sbjct: 74 DGIVLFGTGIDGTQDSIKLASQRLGSNGYSLGHRPNHQNGIWIRGTITNSIEVLKKPKQV 133 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 K L ++LN ++Q +KK + LD + + LP L+ + ++ K+ Sbjct: 134 TKQTKLNQILN-QSQPNSKKN-----------QSPLDNLESLKFLPSLIVIFSPHQSKVL 181 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++EA +IP + ++D++ +P LV Y IP NDDS RSI L +++ A +G+ R+ Sbjct: 182 LREASLKQIPTIGIIDSDLDPRLVTYPIPANDDSIRSIELIAGVLSKAGQEGLKRR 237 >gi|116204175|ref|XP_001227898.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51] gi|88176099|gb|EAQ83567.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51] Length = 1086 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 29/228 (12%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ L+ + V GH WNP +RYI+ +R HII L T L++A +V+ + G Sbjct: 808 TLEMLMAAQVHMGHHISQWNPANQRYIYGQRAGIHIISLETTATHLRRAARVVEEVAYYG 867 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ + V+ AA+ + Y + KW G +TN RD+ Sbjct: 868 GLILFVGTRKEHMPVVVRAAELAQGYHLFQKWTPGAITN-----------RDI------- 909 Query: 127 NQGFTKKERLNIERKRDKLKRALDG----IRDMGG-LPDLMFVVDTNREKLAIQEARRLR 181 L I +DK+ LDG +RD +PDL+ ++ + E Sbjct: 910 ---ILASGELKIVDGQDKV---LDGFETHLRDRRPVVPDLVVCLNPLENYPLLHECGVAN 963 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + ++DT+++P V Y IP NDDS RS+ L ++ A G R+ Sbjct: 964 IPTIGLIDTDADPTWVTYQIPANDDSLRSVTLLAGVLGRAGERGQQRR 1011 >gi|39944640|ref|XP_361857.1| hypothetical protein MGG_04331 [Magnaporthe oryzae 70-15] gi|145015070|gb|EDJ99638.1| hypothetical protein MGG_04331 [Magnaporthe oryzae 70-15] Length = 398 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 23/225 (10%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ L+ S GH LWNP R+I+ R + HII L QT L++A +++ + G Sbjct: 138 TLELLMASQCHMGHHKSLWNPANARFIYGVRQDIHIISLEQTAAHLRRAARLVEEVAFCG 197 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ + V AA+ S + +KW G +TN + LR ++E ++E Sbjct: 198 GLILFVGTRQGQMEIVTRAAELSRSCHLFNKWTPGTITNRDQLLAG-GALRMVDE-HDRE 255 Query: 127 NQGFTK--KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 GF K +ER I PDL+ V++ + + E + +IP Sbjct: 256 LPGFEKHLQERRPIT-------------------PDLVVVLNPLENNILLHECKVSQIPT 296 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + V+DTN++ V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 297 IGVIDTNADVTKVTYPIPANDDSLRSMAVIAGVLGRAGELGQKRR 341 >gi|42561137|ref|NP_975588.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492634|emb|CAE77230.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 128 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/117 (41%), Positives = 74/117 (63%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLETLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEE 120 >gi|195342548|ref|XP_002037862.1| GM18067 [Drosophila sechellia] gi|194132712|gb|EDW54280.1| GM18067 [Drosophila sechellia] Length = 265 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDERMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|195401303|ref|XP_002059253.1| GJ16130 [Drosophila virilis] gi|194156127|gb|EDW71311.1| GJ16130 [Drosophila virilis] Length = 271 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L+ AL V++ R Sbjct: 59 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGSRLGHLIFDLDKTAAHLRDALNVVAHIAFR 118 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 119 DGIILFFNRNALNAHLVEQKAMEAGEFSHTRFWRGGIFTNANVQFHAVTRLPDLCIFLNT 178 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + A+++A ++ IP V Sbjct: 179 QNNVLA--------------------------------------QHTAVRDAAKMAIPTV 200 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A G ++ +G Sbjct: 201 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRRELLG 249 >gi|297269902|ref|XP_001097716.2| PREDICTED: 28S ribosomal protein S2, mitochondrial isoform 2 [Macaca mulatta] Length = 363 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 38/213 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 146 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGNRLDQDIIDLEQTAAHLQLALNFTAHVAYR 205 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GG++TN + +L DL L+ Sbjct: 206 KGIILFISRNRQFSYLIENTARHCGEYAHTRYFKGGLLTNAPLLFGPAVRLPDLIIFLHT 265 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 266 LNTIF--------------------------------------EPHVAVRDAAKMNIPTV 287 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +VDTN NP L+ Y IPGNDDS ++ L+C L Sbjct: 288 GIVDTNCNPCLITYPIPGNDDSPPAVHLYCRLF 320 >gi|195471357|ref|XP_002087971.1| GE14662 [Drosophila yakuba] gi|194174072|gb|EDW87683.1| GE14662 [Drosophila yakuba] Length = 264 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|28574694|ref|NP_523473.2| mitochondrial ribosomal protein S2 [Drosophila melanogaster] gi|195576610|ref|XP_002078168.1| GD22685 [Drosophila simulans] gi|21428678|gb|AAM49999.1| RE59650p [Drosophila melanogaster] gi|28380249|gb|AAF50970.2| mitochondrial ribosomal protein S2 [Drosophila melanogaster] gi|194190177|gb|EDX03753.1| GD22685 [Drosophila simulans] gi|220949104|gb|ACL87095.1| mRpS2-PA [synthetic construct] gi|220958178|gb|ACL91632.1| mRpS2-PA [synthetic construct] Length = 264 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|315054367|ref|XP_003176558.1| 40S ribosomal protein mrp4 [Arthroderma gypseum CBS 118893] gi|311338404|gb|EFQ97606.1| 40S ribosomal protein mrp4 [Arthroderma gypseum CBS 118893] Length = 334 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP YI R HII L T L++A +++ + G Sbjct: 103 TLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVARVG 162 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G ILFV T+ V+ AA+ + V +W+ G +TN ++Q L E +L++ Sbjct: 163 GLILFVGTRKGHKRAVVRAAELAQGCHVFDRWVPGSLTN------ALQLLNKCEVKLVDA 216 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ E ++ +R LK PDL+ + K +QE + IP + Sbjct: 217 LDRTVDHPEFQGVDIERAPLK------------PDLVVCFNPLENKPLLQECATMNIPTI 264 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V+DT+++P V Y IP NDDS R I++ ++ A G Sbjct: 265 GVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERG 304 >gi|115389276|ref|XP_001212143.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194539|gb|EAU36239.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 341 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ LL + GH WNP+ RYIF R+ HII L T L++A +V+ + AR Sbjct: 105 ISLELLLANQTHLGHSTSRWNPQNSRYIFGIRDGVHIISLDVTAAYLRRAAKVVEEVAAR 164 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++N Sbjct: 165 GGLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCET-----KVVNG 219 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ K + L +R K PDL+ ++ + + E +P + Sbjct: 220 LDEELPKYKELLADRPVLK--------------PDLVVCLNPLENVVLLHECGLNNVPTI 265 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++DT+++ V Y IP NDDS R++ L ++ A G R+ Sbjct: 266 GIIDTDADATRVTYPIPSNDDSLRAVGLIAGILGRAGEAGQLRR 309 >gi|311246761|ref|XP_003122327.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Sus scrofa] Length = 289 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME Y+F R IIDL QT LQ AL + R Sbjct: 78 FSVRSLFDARVHLGHKAGCRHRFMEPYLFGSRLGQDIIDLEQTAAHLQLALNFTAHVAYR 137 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + A+ +Y + GG++TN + +L DL L+ Sbjct: 138 EGIILFVSRHRQFAHLIETTARDCGEYAHTRYFKGGLLTNAPLLLGPGVRLPDLIIFLHT 197 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 198 LNNVF--------------------------------------EPHVAVRDAAKMNIPTV 219 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ LFC L A Sbjct: 220 GIVDTNCNPALITYPVPGNDDSPPAVRLFCRLFQVA 255 >gi|221119128|ref|XP_002156548.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 244 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 40/218 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++L +S V GH WNP YI+ +R+ IIDL+QTV L AL V+S V G Sbjct: 59 LKKLFDSRVHLGHHEGTWNPLTRPYIYGQRSTQLIIDLNQTVECLNCALNVLSHIVYNQG 118 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILF++ + + + A+ +Y + W G+ TN + QKL DL N N Sbjct: 119 IILFISMNPRFDYLIQKTARDCEEYFITHGWQKGLFTN-SPLKLGTQKLPDLVIAFN--N 175 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 F E+ RD AI EA IP++ + Sbjct: 176 SRF--------EKTRD-----------------------------AIIEASMCNIPVIGI 198 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VDT+ +P L+ Y IP NDD+ S++ CD+ A ++ Sbjct: 199 VDTDCDPRLITYPIPANDDTYDSVSHLCDIFKQAILNA 236 >gi|66553073|ref|XP_395329.2| PREDICTED: 28S ribosomal protein S2, mitochondrial [Apis mellifera] Length = 259 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 46/224 (20%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FTI+ L ++ V FGH+ N M +IF R IIDL ++ +L++AL + + Sbjct: 65 FTIKDLFDAKVHFGHKEGSLNDHMRPFIFGSRLGHLIIDLDKSAELLRQALNFTAHIAFK 124 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+A Q S V AK +Y KW G TN ++Q+ Sbjct: 125 NGIILFIAKNPQISYLVENTAKECQEYAHTRKWNLGTFTN------AVQEF--------- 169 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN----REKLAIQEARRLR 181 GI + LPDL ++T ++ A+ A ++ Sbjct: 170 -------------------------GI--VTRLPDLCIFLNTMESVVKQHTAVVHAAKMC 202 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP V +VDTN +P L+ Y +PGNDD+ +I L+C L +A I G Sbjct: 203 IPSVGIVDTNCDPKLITYPVPGNDDTPCAIELYCKLFKNAIIKG 246 >gi|296191147|ref|XP_002743530.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Callithrix jacchus] Length = 390 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 94/212 (44%), Gaps = 38/212 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 173 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDQDIIDLEQTATHLQLALNFTAHMAYR 232 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GG++TN + +L DL L+ Sbjct: 233 KGIILFISRNRQFSYLIENLARDCGEYAHTRYFTGGLLTNAPLLFGPGVRLPDLIIFLHT 292 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 293 LNNVF--------------------------------------EPHIAVRDAAKMNIPTV 314 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 +VDTN NP LV Y +PGNDDS ++ L+C L Sbjct: 315 GIVDTNCNPCLVTYPVPGNDDSPPAVHLYCRL 346 >gi|170094018|ref|XP_001878230.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646684|gb|EDR10929.1| predicted protein [Laccaria bicolor S238N-H82] Length = 200 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 39/225 (17%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q TI LL SG FGH + NP Y + R IIDL T+P+L++A+ ++ Sbjct: 1 QTTISALLASGAHFGHASTRMNPNFMPYAYGTRAGITIIDLDHTLPLLRRAVNLVRAVAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKR--SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILF+ T+S + +AA+R S + V +W+ G ++N + + Sbjct: 61 AGGQILFIGTRSDLRPVIQKAAERLGSQGFHVGERWVPGTLSNRRQIF------------ 108 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 G ++ N+ +PDL +++ +AI E + Sbjct: 109 ------GGGVVDKTNV-------------------VPDLAIILNPLSNAIAISELSVEHV 143 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P + V+D+N +P +V Y IP ND+++R+ L +++ A +G+A Sbjct: 144 PTIGVIDSNVDPRVVMYPIPANDENTRTAELIAGVLSVAGREGVA 188 >gi|53131467|emb|CAG31821.1| hypothetical protein RCJMB04_11n4 [Gallus gallus] Length = 373 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 94/220 (42%), Gaps = 38/220 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + M+ YIF R + IIDL QT+ LQ AL + R Sbjct: 55 FTLKDLFDARVHLGHKKGCRHQFMKPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 114 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q V A+ +Y W GG++TN +L DL L+ Sbjct: 115 KGIILFVSRNRQFCHLVESTARECGEYAHTRYWQGGLLTNAHIQFGPGIRLPDLLIFLSS 174 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +AI++A ++ IP V Sbjct: 175 LNNVF--------------------------------------EPHVAIRDAAKMNIPTV 196 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VVDTN NP L+ Y IPGNDDS ++ L+C L I Sbjct: 197 GVVDTNCNPCLITYPIPGNDDSPTAMELYCKLFKMTIIHA 236 >gi|320164687|gb|EFW41586.1| mitochondrial ribosomal protein subunit S2 [Capsaspora owczarzaki ATCC 30864] Length = 960 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 43/225 (19%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQL ++GV GH+ N YIF ER+ HIIDL QT+ L++A +V+ + Sbjct: 758 TLRQLFDAGVHLGHKAGCHNVFANSYIFGERDGIHIIDLEQTIVALRRACRVLKHIAYQN 817 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV +S+ V E A +Y + +KW+ G +TN + ++++ Sbjct: 818 GVILFVGGRSKHKQLVRETAMSVGEYYIANKWMPGTLTNPMSTLGALRQ----------- 866 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PDL+ + +EA +P + Sbjct: 867 --------------------------------PDLIVLTCMPMSSQVAREANLANVPTIG 894 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 + DT+ +P V Y IP NDDS RS+AL +++ A +G ++ + Sbjct: 895 IADTDCDPRQVTYSIPANDDSPRSMALLLNVMRMAIEEGKTKRQA 939 >gi|125985943|ref|XP_001356735.1| GA15531 [Drosophila pseudoobscura pseudoobscura] gi|195148144|ref|XP_002015034.1| GL19496 [Drosophila persimilis] gi|54645060|gb|EAL33800.1| GA15531 [Drosophila pseudoobscura pseudoobscura] gi|194106987|gb|EDW29030.1| GL19496 [Drosophila persimilis] Length = 278 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L+ AL ++ R Sbjct: 66 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTAVHLRDALNFVAHIAFR 125 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 126 DGIILFFNRNALNAHLVEQKALEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 185 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP V Sbjct: 186 QNNVMS--------------------------------------QHTAVRDAAKMAIPTV 207 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G ++ +G Sbjct: 208 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRKRRELLG 256 >gi|149236425|ref|XP_001524090.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146452466|gb|EDK46722.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 492 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 32/231 (13%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI LL +G FG + P + +++ N H+IDL++T+ LQ A +VI +G Sbjct: 257 TISTLLAAGCHFGQSVASFRPSFQPFVYGTYNGVHVIDLNKTLEQLQLACKVIEGVSEKG 316 Query: 67 GRILFVATKSQAS--DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI------QKLRD 118 G ILFV T S + ++ AA RS Y V+ +W+ G +TN+ V++ I Q++ Sbjct: 317 GSILFVGTHKNWSIRESLIAAANRSRGYYVSKRWIPGTITNYVEVTKQILDPFQKQQIDM 376 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E+++ T KE I + PDL+ +++ + I+E Sbjct: 377 ADEVIS------TGKEHNLIIK------------------PDLVVLLNPVENRNCIKECL 412 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + + D++ P L+ Y IP NDD RS+ L +++ AA G+ R+ Sbjct: 413 AACIPTIGLCDSDMEPSLLTYPIPCNDDGVRSVNLMLGVMSKAAETGLNRR 463 >gi|150406486|ref|YP_001315128.1| ribosomal protein S2 [Chlorokybus atmophyticus] gi|126507723|gb|ABO15120.1| ribosomal protein S2 [Chlorokybus atmophyticus] Length = 442 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 91/156 (58%), Gaps = 8/156 (5%) Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILF T + + V AAK + Q +N+KWLGG++TNWK ++ S+ + E+L Sbjct: 280 GHILFFNTNPEYNKIVRLAAKLTDQSYLNNKWLGGLLTNWKEINLSLGLFQKFEDLY--- 336 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + F ++ ++ R + K+K++ +GI + P+L+ ++ N+ ++ I+EA L IPI+A Sbjct: 337 -KSFLIRKNISFSRYK-KMKKSFEGISPLKKRPNLIIFLNPNQNEIPIREAFNLNIPIIA 394 Query: 187 VVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVA 219 +VD+N+ P L + Y IPG S I F +LV Sbjct: 395 LVDSNTPPRLLSQITYPIPGAQTSLPFIYFFLNLVV 430 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 F RQL GH+ LWN +I +NNT II+L +T L+++L+V++ Sbjct: 152 FITRQLFNENAHLGHQ--LWNYGTSSFIVGRKNNTSIINLEETKVALKRSLKVVN 204 >gi|330920844|ref|XP_003299174.1| hypothetical protein PTT_10115 [Pyrenophora teres f. teres 0-1] gi|311327245|gb|EFQ92720.1| hypothetical protein PTT_10115 [Pyrenophora teres f. teres 0-1] Length = 419 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 21/221 (9%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP RYI R HII L T L++A +++ + R Sbjct: 122 VTLELLLASEAHQGHVTSLWNPANARYIHGVRQGVHIISLEVTAAHLRRAAKIVQEVCRR 181 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLN 124 G +LFV T+ V AA+ + Y + +W+ G +TN + Q + K R + L+ Sbjct: 182 AGMVLFVGTRDGQERAVARAAELAKGYHLFERWIPGSITNGQ---QILGKCRTKVVNELD 238 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E GF +E+L L+R + +R PDL+ ++ + + E IP Sbjct: 239 EEVPGF--EEQL--------LERPV--LR-----PDLVVCMNPLENYVLLHECALNNIPT 281 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + V+DTN++P V Y IP NDDS R I + ++ A G Sbjct: 282 IGVIDTNADPTWVTYPIPANDDSLRCIQVIAGVLGRAGEAG 322 >gi|258576555|ref|XP_002542459.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237902725|gb|EEP77126.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 535 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 19/221 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + Sbjct: 297 EITLELLLASQSHLGHATALWNPRNSSYIFGVRDGIHIISLEVTAAYLRRAARVVEEVAR 356 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R G ILFV T+ V+ AA+ + Y + +W+ G +TN + + L+ ++E N Sbjct: 357 RAGLILFVGTRPGQRGAVVRAAELAKGYHIFDRWIPGSITNGQRILDEC-ALKVVDEFDN 415 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + T + + R PDL+ ++ + E IP Sbjct: 416 ELPEYTTALGKHPVLR------------------PDLVVCLNPLENTAMLSECAAYNIPT 457 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DT+++ V Y IP NDDS R +A+ + A G Sbjct: 458 IGIIDTDADVTTVTYPIPANDDSLRCVAVIAGALGRAGEAG 498 >gi|47228392|emb|CAG05212.1| unnamed protein product [Tetraodon nigroviridis] Length = 262 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 46/216 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME Y++ R IIDL QT+ LQ AL + R Sbjct: 67 FSLKDLFDARVHLGHKRGCRHRLMEPYLYGCRLEQDIIDLDQTMEHLQLALNFTAHVAYR 126 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V AK +Y W GG++TN Sbjct: 127 GGVILFVSRRRQFGHLVECTAKECGEYAHTRYWQGGLLTN-------------------- 166 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLR 181 NI+ G+R LPDL+ + T ++ + I++A ++ Sbjct: 167 ----------ANIQYG--------PGVR----LPDLIIFLSTLNNVFQQHVGIRDAAKMN 204 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 IP V VVD+N NP L+ Y +PGNDD+ ++ +C L Sbjct: 205 IPTVGVVDSNCNPSLLTYPVPGNDDTPAAVEFYCRL 240 >gi|83745345|gb|ABC42384.1| ribosomal protein subunit 2 [Phelipanche purpurea] Length = 161 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 95/163 (58%), Gaps = 9/163 (5%) Query: 27 PKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAA 86 PKM YI E + HII+L++T L +A ++ + +RG + L V T++ +D V EAA Sbjct: 1 PKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETITADLVEEAA 60 Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIERKR 142 ++ + VN KW GG++TNW S + ++L+ L KE +G KK+ ++R+ Sbjct: 61 IKADCHFVNKKWTGGLLTNW---SITEERLKYFNYLRVKEIKGGFDCLPKKDAAVVKRQL 117 Query: 143 DKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIP 183 + ++ L GI++M GLPD++ ++ + N E A+QE L IP Sbjct: 118 SRFQKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIP 160 >gi|126302695|ref|XP_001372572.1| PREDICTED: similar to mitochondrial ribosomal protein S2, [Monodelphis domestica] Length = 340 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 46/218 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME YIF R IIDL QTV LQ AL + R Sbjct: 127 FSLQTLFDARVHLGHKKGCRHRFMEPYIFGTRLEQDIIDLDQTVKHLQLALNFTAHVAYR 186 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + + A +Y + GG++TN Sbjct: 187 KGIILFVSRNRQFTHLIEKLAVDCGEYAHVRYFKGGLLTNAPV----------------- 229 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLR 181 + G+R LPDLM T +A+++A ++ Sbjct: 230 ---------------------QFGPGVR----LPDLMIFFHTLNNVFETHVAVRDAAKMN 264 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 IP V +VDTN NP L+ Y IPGNDDS SI LFC L Sbjct: 265 IPTVGIVDTNCNPCLISYPIPGNDDSPDSIKLFCQLFG 302 >gi|332261233|ref|XP_003279679.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Nomascus leucogenys] Length = 296 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 38/213 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 79 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHVAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GG++TN + +L DL L+ Sbjct: 139 KGIILFISRNRQFSYLIENTARDCGEYAHTRYFKGGLLTNAPLLFGPTVRLPDLIIFLHT 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + F +A+++A ++ IP V Sbjct: 199 LSNIF--------------------------------------EPHVAVRDAAKMNIPTV 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +VDTN NP L+ Y +PGNDDS ++ L+C L Sbjct: 221 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLF 253 >gi|156039607|ref|XP_001586911.1| hypothetical protein SS1G_11940 [Sclerotinia sclerotiorum 1980] gi|154697677|gb|EDN97415.1| hypothetical protein SS1G_11940 [Sclerotinia sclerotiorum 1980 UF-70] Length = 365 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 23/222 (10%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L+ S GH LWNP +RYI+ R HII L +T L++ +V+ Sbjct: 117 ITLELLMASQSHLGHATQLWNPANQRYIYGIRQGVHIISLEETAAHLRRCAKVVEGVAYH 176 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV--SQSIQKLRDLEELL 123 GG ILFV T++ V++AA + + ++W+ G +TN + +I+ + +E++ Sbjct: 177 GGLILFVGTRAGQDSAVVKAASLAKGCHLFNRWVAGSITNGDQILAKCAIKAIDANDEVV 236 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GF K K LK PDL+ ++ + + E IP Sbjct: 237 ----AGFEDKVM-----KWKALK------------PDLVVCLNPLENYILLHECGLHNIP 275 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + V+DT+++P V Y IP NDDS R I L ++ A +G Sbjct: 276 TIGVIDTDADPTWVTYPIPANDDSLRCIQLIAGVLGRAGEEG 317 >gi|145629994|ref|ZP_01785776.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|145632291|ref|ZP_01788026.1| 30S ribosomal protein S2 [Haemophilus influenzae 3655] gi|145641897|ref|ZP_01797471.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|144984275|gb|EDJ91698.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|144987198|gb|EDJ93728.1| 30S ribosomal protein S2 [Haemophilus influenzae 3655] gi|145273376|gb|EDK13248.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.4-21] Length = 105 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 44/86 (51%), Positives = 64/86 (74%) Query: 140 RKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDY 199 R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L IP+ A+VDTNS P VD+ Sbjct: 4 REMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLGIPVFAIVDTNSTPAGVDF 63 Query: 200 VIPGNDDSSRSIALFCDLVASAAIDG 225 VIPGNDD++R+I L+ A+A +G Sbjct: 64 VIPGNDDATRAIQLYVSAAAAAVKEG 89 >gi|189194455|ref|XP_001933566.1| 37S ribosomal protein MRP4, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979130|gb|EDU45756.1| 37S ribosomal protein MRP4, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 413 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 21/221 (9%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP RYI R HII L T L++A +++ + R Sbjct: 116 VTLELLLASEAHQGHVTSLWNPANARYIHGIRQGVHIISLEVTAAHLRRAAKIVQEVSRR 175 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLN 124 G ILFV T+ V AA+ + Y + +W+ G +TN + Q + K R + L+ Sbjct: 176 AGMILFVGTRDGQERAVARAAELAKGYHLFERWIPGSITNGQ---QILGKCRTKVVNELD 232 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +E GF +E+L L R + +R PDL+ ++ + + E IP Sbjct: 233 EEVPGF--EEQL--------LARPV--LR-----PDLVVCMNPLENYVLLHECALNNIPT 275 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + V+DTN++P V Y IP NDDS R I + ++ A G Sbjct: 276 IGVIDTNADPTWVTYPIPANDDSLRCIQVIAGVLGRAGEAG 316 >gi|315303465|ref|ZP_07874055.1| ribosomal protein S2 [Listeria ivanovii FSL F6-596] gi|313628166|gb|EFR96709.1| ribosomal protein S2 [Listeria ivanovii FSL F6-596] Length = 115 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 67/87 (77%) Query: 138 IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLV 197 ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ +VDTN +PD + Sbjct: 3 LKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEI 62 Query: 198 DYVIPGNDDSSRSIALFCDLVASAAID 224 DYVIP NDD+ R++ L +A A I+ Sbjct: 63 DYVIPANDDAIRAVKLLTAKMADAIIE 89 >gi|194766019|ref|XP_001965122.1| GF21552 [Drosophila ananassae] gi|190617732|gb|EDV33256.1| GF21552 [Drosophila ananassae] Length = 265 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G I+F + + V + A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIIVFFNRNALNAHLVEQKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDD+ ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDTPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|195051760|ref|XP_001993165.1| GH13663 [Drosophila grimshawi] gi|193900224|gb|EDV99090.1| GH13663 [Drosophila grimshawi] Length = 267 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L++AL + R Sbjct: 55 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTATHLRQALNFTAHIAFR 114 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + +Y W GG+ TN ++ +L DL LN Sbjct: 115 DGIILFFNRNALNALLVEQKAMEAGEYSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 174 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + A+++A ++ IP + Sbjct: 175 QNNVMA--------------------------------------QHTAVRDAAKMAIPTI 196 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A G ++ +G Sbjct: 197 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRREVLG 245 >gi|169854163|ref|XP_001833758.1| mitochondrial ribosomal protein subunit S2 [Coprinopsis cinerea okayama7#130] gi|116505155|gb|EAU88050.1| mitochondrial ribosomal protein subunit S2 [Coprinopsis cinerea okayama7#130] Length = 308 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 40/223 (17%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI LL +G FGH + NP Y + R IIDL T+P+L++A V G Sbjct: 97 TISALLAAGAHFGHASSRMNPNFMPYAYGTRAGITIIDLDSTLPLLRRAANVTRAVARAG 156 Query: 67 GRILFVATKSQASDCVMEAAKRSAQ---YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G+ILF+ T+ V +AA+R Y V +WL G +TN + Sbjct: 157 GQILFIGTRPDLKPIVQKAAERVGPEQGYYVGDRWLPGTLTNRRE--------------- 201 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F + E+L + +PDL +++ + AI+E +P Sbjct: 202 ------FFRPEQLA----------------NTNVIPDLAIILNPVQNANAIREFAVENVP 239 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++D+N +P LV Y IP ND+++R+ L +++ AA +G+ Sbjct: 240 TIGIIDSNVDPRLVMYPIPANDENTRAAELIGGVLSIAAREGV 282 >gi|83745515|gb|ABC42457.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6509] gi|83745525|gb|ABC42460.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6531] Length = 165 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 7/167 (4%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM YI ER + HII+L++T L +A ++ +RG + L V T +D V + Sbjct: 2 WNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKIRADLVEQ 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIER 140 AA ++ + VN K GG +TNW +QK R+ L+ ++ G +KK+ ++R Sbjct: 62 AAIKAQCHFVNKKLTGGTLTNWSITEARLQKFRN---LIIEQKAGRLDCLSKKDAAVVKR 118 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + + ++ L GI+ M LPD++ + D N E A+QE IP + + Sbjct: 119 QLSRFQKNLGGIKYMRELPDIVIIPDQNEEYKALQECINSGIPTICL 165 >gi|312218088|emb|CBX98034.1| hypothetical protein [Leptosphaeria maculans] Length = 507 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 26/246 (10%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP RYI R HII L T L++A +V+ + RG Sbjct: 194 TLELLLASEAHQGHATSLWNPANARYIHGIRQGVHIISLEVTAAHLRRAAKVVQEVSRRG 253 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR-DLEELLNK 125 G +LFV T+ V AA+ + Y + +W+ G +TN + Q + + R + ++ Sbjct: 254 GIVLFVGTRDGQDRAVARAAELAKGYHLFERWIPGSITNGQ---QILGRCRIKVVNAKDE 310 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E GF +E+L +R L+ PDL+ ++ + + E IP + Sbjct: 311 EVPGF--EEQL---YERPVLR------------PDLVVCLNPLENYVLLHECALNNIPTI 353 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 V+DTN++P V Y IP NDDS R I + ++ A G Q + A K GE Sbjct: 354 GVIDTNADPTWVTYPIPANDDSLRCIQVIAGVLGRA---GEVGQKQRLAAAAK--GEVTY 408 Query: 246 HSKEGM 251 +G+ Sbjct: 409 RPAQGL 414 >gi|326473093|gb|EGD97102.1| 40S ribosomal protein S2 [Trichophyton tonsurans CBS 112818] Length = 332 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 99/230 (43%), Gaps = 39/230 (16%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP YI R HII L T L++A +++ + G Sbjct: 103 TLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVARVG 162 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ V+ AA+ + V +W+ G +TN ++Q L + E Sbjct: 163 GLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTN------AMQLLNECEV----- 211 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGL-----------PDLMFVVDTNREKLAIQ 175 KL ALD D G PDL+ + K +Q Sbjct: 212 -----------------KLVDALDRTVDYPGFQAVDIERCPLRPDLVVCFNPLENKPLLQ 254 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 E + IP + V+DT+++P V Y IP NDDS R I++ ++ A G Sbjct: 255 ECATMNIPTIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERG 304 >gi|326477936|gb|EGE01946.1| 40S ribosomal protein S2 [Trichophyton equinum CBS 127.97] Length = 332 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 99/230 (43%), Gaps = 39/230 (16%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP YI R HII L T L++A +++ + G Sbjct: 103 TLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVARVG 162 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ V+ AA+ + V +W+ G +TN ++Q L + E Sbjct: 163 GLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTN------AMQLLNECEV----- 211 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGL-----------PDLMFVVDTNREKLAIQ 175 KL ALD D G PDL+ + K +Q Sbjct: 212 -----------------KLVDALDRTVDYPGFQAVDIERCPLRPDLVVCFNPLENKPLLQ 254 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 E + IP + V+DT+++P V Y IP NDDS R I++ ++ A G Sbjct: 255 ECATMNIPTIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERG 304 >gi|91079290|ref|XP_972870.1| PREDICTED: similar to mitochondrial ribosomal protein S2 CG2937-PA [Tribolium castaneum] gi|270003534|gb|EEZ99981.1| hypothetical protein TcasGA2_TC002780 [Tribolium castaneum] Length = 249 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 38/224 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ N +M YI+ R I DL +T L++AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLNERMLPYIYGSRLGHIIFDLDKTADYLRRALNFAAHIAYR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ +Q S V + A+ ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFLLRGAQNSHLVEKTAQECGEFAHTRFWRGGIFTNSTKQFGAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + A++++ ++ I + Sbjct: 178 LNNVLLQHT--------------------------------------AVRDSAKMGIATI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +VD+N +P+L+ Y +PGNDDS SI L+C L +A + G R+ Sbjct: 200 GIVDSNCDPNLLTYPVPGNDDSPASIELYCKLFKAAILRGKERR 243 >gi|46123861|ref|XP_386484.1| hypothetical protein FG06308.1 [Gibberella zeae PH-1] Length = 645 Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 37/233 (15%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH+ LWNP RYI+ R H+I L T L++A +V+ + Sbjct: 128 ITLELLLASQTHIGHKTSLWNPANSRYIYGVRQGVHMISLETTAAHLRRAARVVEEVAYN 187 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN----WKTVSQSIQKLRDLEE 121 G ILFV + + V +AA+ + + +KW G +TN K + +D+E Sbjct: 188 AGLILFVGNRKGQMEIVTQAAEMAGACHLFTKWTPGGITNRDVILKMAGTKVVDHKDVE- 246 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGG-----LPDLMFVVDTNREKLAIQE 176 L G + G +PDL+ ++ + E Sbjct: 247 ---------------------------LPGFENYRGSARPLMPDLVVCLNPLENYTLLYE 279 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + V+DTN++P V Y IP NDDS R++A+ ++ A G R+ Sbjct: 280 CGLKSIPTIGVIDTNADPSWVTYTIPANDDSLRAMAVVGGVLGRAGQRGYQRR 332 >gi|327308428|ref|XP_003238905.1| 40S ribosomal protein S2 [Trichophyton rubrum CBS 118892] gi|326459161|gb|EGD84614.1| 40S ribosomal protein S2 [Trichophyton rubrum CBS 118892] Length = 326 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 98/230 (42%), Gaps = 39/230 (16%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP YI R HII L T L++A +++ + G Sbjct: 103 TLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVARVG 162 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ V+ AA+ + V +W+ G +TN +LLNK Sbjct: 163 GLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTNAM-------------QLLNKC 209 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGL-----------PDLMFVVDTNREKLAIQ 175 KL ALD D G PDL+ + K +Q Sbjct: 210 EV---------------KLVDALDRTVDYPGFQSVDIERCPLRPDLVVCFNPLENKPLLQ 254 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 E + IP + V+DT+++P V Y IP NDDS R I++ ++ A G Sbjct: 255 ECATMNIPTIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERG 304 >gi|255018369|ref|ZP_05290495.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL F2-515] Length = 110 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 43/84 (51%), Positives = 64/84 (76%) Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 +++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ +VDTN +PD +DYV Sbjct: 1 EQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYV 60 Query: 201 IPGNDDSSRSIALFCDLVASAAID 224 IP NDD+ R++ L +A A I+ Sbjct: 61 IPANDDAIRAVKLLTAKMADAIIE 84 >gi|205373434|ref|ZP_03226238.1| 30S ribosomal protein S2 [Bacillus coahuilensis m4-4] Length = 137 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 84/123 (68%), Gaps = 5/123 (4%) Query: 106 WKTVSQSIQKLRDLEELLNKENQGF---TKKERLNIERKRDKLKRALDGIRDMGGLPDLM 162 +T+ + I +L+ +E++ +E+ F KKE + ++++ ++L + L GI+DM LPD + Sbjct: 1 LETIQKRIGRLKAIEKM--EEDGTFDVLPKKEVVQLKKEHERLVKFLGGIKDMKSLPDAL 58 Query: 163 FVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 F+VD +E++A+ EAR+L IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A Sbjct: 59 FIVDPRKERIAVAEARKLNIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTGKMADAI 118 Query: 223 IDG 225 ++ Sbjct: 119 LEA 121 >gi|302501267|ref|XP_003012626.1| hypothetical protein ARB_01239 [Arthroderma benhamiae CBS 112371] gi|291176185|gb|EFE31986.1| hypothetical protein ARB_01239 [Arthroderma benhamiae CBS 112371] Length = 336 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 19/220 (8%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP YI R HII L T L++A +++ + G Sbjct: 107 TLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVARVG 166 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G ILFV T+ V+ AA+ + V +W+ G +TN ++Q L E +L++ Sbjct: 167 GLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTN------AMQLLGKCEVKLVDA 220 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ +++ +R L+ PDL+ + K +QE + IP + Sbjct: 221 LDRTVDYPGFQSVDIERCPLR------------PDLVVCFNPLENKPLLQECATMNIPTI 268 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V+DT+++P V Y IP NDDS R I++ ++ A G Sbjct: 269 GVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERG 308 >gi|195118572|ref|XP_002003810.1| GI21009 [Drosophila mojavensis] gi|193914385|gb|EDW13252.1| GI21009 [Drosophila mojavensis] Length = 271 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M YI+ R I DL +T L+ AL + R Sbjct: 59 FTVRDLFNARVHYGHKEGSLDDRMRPYIYGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 118 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 119 DGIILFFNRNAINAHLVEKKAMEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 178 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A++++ ++ IP + Sbjct: 179 QN--------------------------------------NVMAQHTAVRDSAKMAIPTI 200 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A G ++ +G Sbjct: 201 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRRELLG 249 >gi|302665900|ref|XP_003024556.1| hypothetical protein TRV_01268 [Trichophyton verrucosum HKI 0517] gi|291188615|gb|EFE43945.1| hypothetical protein TRV_01268 [Trichophyton verrucosum HKI 0517] Length = 357 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 19/220 (8%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP YI R HII L T L++A +++ + G Sbjct: 128 TLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVARVG 187 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G ILFV T+ V+ AA+ + V +W+ G +TN ++Q L E +L++ Sbjct: 188 GLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTN------AMQLLGKCEVKLVDA 241 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ +++ +R L+ PDL+ + K +QE + IP + Sbjct: 242 LDRTVDYPGFQSVDIERCPLR------------PDLVVCFNPLENKPLLQECATMNIPTI 289 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V+DT+++P V Y IP NDDS R I++ ++ A G Sbjct: 290 GVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERG 329 >gi|321437417|gb|ADW83719.1| ribosomal protein S2 [Musa acuminata AAA Group] Length = 134 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 3/127 (2%) Query: 101 GMMTNWKTVSQSIQKLRDL--EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL 158 GM+TNW T +QK RDL E+ + K N+ K++ ++RK L+ L GI+ M GL Sbjct: 1 GMLTNWSTTETRLQKFRDLRAEQKMGKLNR-LPKRDAAMLKRKLSALQTYLGGIKYMTGL 59 Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ +VD E +A++E L IP + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 60 PDIVIIVDQQEEYMALRECVILGIPTICLIDTNCDPDLADISIPANDDAIASIRLVLNKL 119 Query: 219 ASAAIDG 225 SA +G Sbjct: 120 VSAICEG 126 >gi|11466658|ref|NP_066341.1| ribosomal protein S2 [Malawimonas jakobiformis] gi|10178696|gb|AAG13708.1|AF295546_34 ribosomal protein S2 [Malawimonas jakobiformis] Length = 204 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 39/225 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLL++G+ GH+ WNPKM Y+ + HII+L T+ +L+K + VI + + Sbjct: 6 LTLKQLLKAGLHLGHQKKRWNPKMSMYLIGIIKDIHIINLEYTIIILKKIIDVIHNIIIN 65 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G+ILF+ ++ ++ K + G+ TN +DL Sbjct: 66 KGKILFLINNINDITNIINKISNKHIQVIDGKEIHGIFTN-----------KDL------ 108 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++K +L I PD +F+ + N I EA +LRIPI+ Sbjct: 109 --YNYSKSSKLFI--------------------PDALFITNMNNYIYTINEANKLRIPII 146 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 + VD+N NP L+ Y IPGN+DS +SI +L+ + ++ I +++ Sbjct: 147 SFVDSNCNPTLITYPIPGNNDSIQSIQFLYNLLNNIILNSIIKEN 191 >gi|156538291|ref|XP_001603481.1| PREDICTED: similar to RE59650p [Nasonia vitripennis] Length = 256 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 38/220 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ + M +I+ R I DL T +L++AL + Sbjct: 64 FTVKDLFDARVHYGHKEGTLDEHMRPFIYGSRMGHLIFDLDHTAELLREALNFTAHIAYN 123 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ Q + V + AK ++ +W GG+ TN ++ +L DL L+ Sbjct: 124 QGIILFLCRNPQNTHLVEKTAKECGEFAHTRRWRGGIFTNSTKEFGAVTRLPDLCIFLST 183 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N +M E A+ A ++ IP V Sbjct: 184 LNT--------------------------------VML------EHRAVSNAAKMLIPTV 205 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VD+N NP+L+ Y +PGNDD+ ++ L+C L A + G Sbjct: 206 GIVDSNCNPNLITYPVPGNDDTPCAVELYCKLFKQAILLG 245 >gi|164657091|ref|XP_001729672.1| hypothetical protein MGL_3216 [Malassezia globosa CBS 7966] gi|159103565|gb|EDP42458.1| hypothetical protein MGL_3216 [Malassezia globosa CBS 7966] Length = 379 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 24/241 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQ-TVPMLQKALQVISDTV 63 Q T+ LL + Q GH E Y++ R+ +ID+ + T+P L++A+QV+ Sbjct: 121 QLTLSHLLAATAQMGHAKQHVTRSFEPYLYGYRHGMGVIDVERATLPALRRAIQVVRGIT 180 Query: 64 ARGGRILFVATKSQASDCVMEAAKR---SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 G IL + T+ + A +R + + +WL G++TN Sbjct: 181 ENDGIILIIGTRPNLRPAIRSAIERLGGNGFHVSMDRWLPGVLTN-------------AS 227 Query: 121 ELLNKENQGFTKKERLN--IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +LL Q + + + +E + K A G R PDL+ V++ A++EA Sbjct: 228 KLLASATQYSVRSKHSDDDVEEVPNMTKLATQGYR-----PDLVIVLNPTENGHALREAT 282 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 + IP + ++DTN +P V Y IP NDDS R L L++ A DG+ R+ + + A K Sbjct: 283 QCHIPTMGIIDTNVDPRSVTYAIPANDDSPRVAELVIGLLSKAGEDGLRRRRAALEAWEK 342 Query: 239 S 239 S Sbjct: 343 S 343 >gi|315929212|gb|EFV08433.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 305] Length = 112 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 43/73 (58%), Positives = 56/73 (76%) Query: 155 MGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 M PD++FV+DT +EK+A+QEA RLRIP+VA +DTN +PDLV Y IPGNDD+ RS+ LF Sbjct: 1 MKTQPDMIFVIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLF 60 Query: 215 CDLVASAAIDGIA 227 C +A A +G A Sbjct: 61 CQEMAEAINEGKA 73 >gi|224073688|ref|XP_002199501.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 179 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 83/189 (43%), Gaps = 38/189 (20%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 ME Y F R + IIDL QT+ LQ AL + RGG ILFV+ + Q V A+ Sbjct: 1 MEPYHFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYRGGIILFVSRRRQFCHLVESTARA 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 +Y W GG++TN + +L DL L+ N F Sbjct: 61 CGEYAHTRYWQGGLLTNAHILFGPGVRLPDLLIFLSTLNNVF------------------ 102 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 +AI++A ++ IP V VVDTN NP L+ Y +PGNDDS Sbjct: 103 --------------------EPHVAIRDAAKMNIPTVGVVDTNCNPCLISYPVPGNDDSP 142 Query: 209 RSIALFCDL 217 ++ L+C L Sbjct: 143 AAMELYCKL 151 >gi|218462273|ref|ZP_03502364.1| 30S ribosomal protein S2 [Rhizobium etli Kim 5] Length = 82 Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 43/72 (59%), Positives = 58/72 (80%) Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 I EA+RL IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S Sbjct: 1 IDEAKRLGIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSS 60 Query: 234 GADTKSAGETVV 245 G D ++ E V Sbjct: 61 GRDLGASSEVPV 72 >gi|11497488|ref|NP_042278.1| ribosomal protein S2 [Prototheca wickerhamii] gi|1173299|sp|P46741|RT02_PROWI RecName: Full=Ribosomal protein S2, mitochondrial gi|467879|gb|AAD12666.1| ribosomal protein S2 [Prototheca wickerhamii] Length = 274 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 32/221 (14%) Query: 13 ESGVQFGHRNFL------WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++G GH++ W+P M +Y R+N I ++ QT L +A V++ + G Sbjct: 37 KAGTHIGHKSIHLSETHSWHPSMAQYHLGIRDNITICNVQQTQKCLSRAFYVLTQILDNG 96 Query: 67 GRILFVATKSQASDCVMEAAK-----------RSAQYCVNSKWLGGMMTNWKTVSQSIQK 115 G +L V T + + + K + YC KW+GG +TN+K +S+SI Sbjct: 97 GNVLIVNTNPEFYKLSINSMKFIEKNLPFQTFSAISYCF-YKWIGGTLTNYKQISKSIYC 155 Query: 116 LRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGG---------LPDLMFVVD 166 + K F +K ++ R + K+K+ G + G PD++F+ + Sbjct: 156 YVKFTQRCGK----FCEKNNIDFTRYQ-KIKKCFQGYGSVSGDSIVMSLQKKPDVIFIFN 210 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 K I EA RL+IP++ D +SN + + Y IP N+ S Sbjct: 211 PGDNKNLILEANRLQIPVIGCTDMSSNTNGISYPIPCNNTS 251 >gi|50555890|ref|XP_505353.1| YALI0F12991p [Yarrowia lipolytica] gi|49651223|emb|CAG78160.1| YALI0F12991p [Yarrowia lipolytica] Length = 427 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 12/220 (5%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL +G GH L + + +I+ R+ IIDL QTV L++A ++ + Sbjct: 174 TVTSLLAAGAHLGHAVELGHVNNQPFIYGVRDGISIIDLEQTVTQLRRAARITEAVAKQN 233 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ + ++R V+SKW+ G +TN+ ++ + ++ E+++ E Sbjct: 234 GLILFVGTRDGQKLALEAMSRRCGASYVHSKWIPGAITNFSNIAANWKRY----EVVDGE 289 Query: 127 NQGFTKKERLNIERKRDKLKRALDG-IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + T +N R+ D I PDL+ +++ + I+E + IP V Sbjct: 290 SG--TSFADINQHTGRE-----FDAEISGPNMRPDLVIILNPDENPALIRECLKSCIPTV 342 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V DTN NP + Y I NDDS R+ L ++A AA G Sbjct: 343 GVADTNFNPSKLSYPIAANDDSLRTTDLITGVLARAAEKG 382 >gi|327195238|ref|YP_004339020.1| ribosomal protein S2 [Coccomyxa sp. C-169] gi|325070734|gb|ADY75462.1| ribosomal protein S2 [Coccomyxa sp. C-169] Length = 282 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 29/239 (12%) Query: 6 FTIRQLLESGVQFGHRNF------LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 F +++L++SG GHR + P M + ER + + S T+ K L + Sbjct: 24 FWLKRLIQSGGHVGHRPLNLSLSRVRYPAMSNSLIGERGQGAVTNASLTLQQTAKGLYLA 83 Query: 60 SDTVARGGRILFVATKSQAS--DCVMEAAKR---SAQYCVNSKWLGGMMTNWKTVSQSIQ 114 + + + G IL V T+ + S + ++E+ KR S+ ++W+GG +TNW + S+ I Sbjct: 84 ASVLRQRGHILVVDTRREISPTNGLIESCKREISSSLSFSGNRWVGGSLTNWGSTSKMIS 143 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGG---------LPDLMFVV 165 + + + F K R++ R +K K+A G + G PDL+F++ Sbjct: 144 RFAQISSRF----EAFLKANRIHSPRY-EKTKQAYPGFLMLKGGRLQLRLTRQPDLLFII 198 Query: 166 DTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDD----SSRSIALFCDLVAS 220 + N + I+EAR L+IP+VA+VD+N+ V IP N + S++ + + DL S Sbjct: 199 NPNENRHVIEEARMLKIPVVALVDSNTQLSHVTVPIPVNPNPTLWSNQIVRILIDLATS 257 >gi|116334922|ref|YP_802417.1| ribosomal protein S2 [Candidatus Carsonella ruddii PV] gi|122940485|sp|Q05FX0|RS2_CARRP RecName: Full=30S ribosomal protein S2 gi|116235203|dbj|BAF35051.1| ribosomal protein S2 [Candidatus Carsonella ruddii PV] Length = 216 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 111/211 (52%), Gaps = 2/211 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I L+ S + G+ N M++YI NN +I DL + + + + I + Sbjct: 3 IIHLINSDIFIGNNKKFLNFSMKKYIIFTINNLNIFDLKKIIISVLLLKKYIKFIYKKKM 62 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILF+ TK+ + + + ++ Q V +KW+ G +TN + + + + Sbjct: 63 KILFIGTKNFFRELIYKFSRSIRQPFVCNKWISGSLTNLQNYKK--MINKLKIIRKKIKF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + +TKKE+++ +K K++ G R++ P L+ + D N++K+ + EA+RL+I I + Sbjct: 121 KSYTKKEKISFLKKEKKIEILFGGFRNLKKTPKLIIISDINKDKIIVNEAKRLKIKIASF 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +D++ N +D+++P N++S SI + +++ Sbjct: 181 LDSSDNCSKIDFILPCNNNSINSIKIILNIL 211 >gi|171679828|ref|XP_001904860.1| hypothetical protein [Podospora anserina S mat+] gi|170939540|emb|CAP64767.1| unnamed protein product [Podospora anserina S mat+] Length = 369 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 43/224 (19%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ LL + GH WNP RYI+ ER++ HII L QT L++A +V+ + G Sbjct: 117 SLEDLLAAQCHMGHHVSRWNPANSRYIYGERSDIHIISLEQTAAHLRRAARVVEEVAYHG 176 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV + V A+ + + KW G+ ++ + LRD + Sbjct: 177 GLILFVGNRKGQMPIVTRMAELAGACHLFQKWTPGVYEGFE------EHLRDCRPVTP-- 228 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA-IQEARRLRIPIV 185 D GGL D + E A ++E +P V Sbjct: 229 ---------------------------DFGGLRDPL-------ENYALLRECALATVPTV 254 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 V+DT+++P V Y IP NDDS RS+AL ++ A G R+ Sbjct: 255 GVIDTDADPSWVTYQIPANDDSLRSVALIAGVLGRAGERGQQRR 298 >gi|60117136|ref|YP_209599.1| ribosomal protein S2 [Polysphondylium pallidum] gi|51339700|gb|AAU00614.1| ribosomal protein S2 [Polysphondylium pallidum] Length = 244 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 18/218 (8%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +L++S G + WNP + +I+ R N +I++L TV L++ L +I + G++ Sbjct: 19 ELIKSEFYIGCKKSRWNPLLVGFIYKIRKNIYILNLEYTVYQLRRGLNMIKTIIRNRGQV 78 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 L V K + S+ V K+S Q V+ K+ G + ++K + ++LL ++ G Sbjct: 79 LMVVLKKKVSNLVKTLLKKSKQGYVDYKYYKGSLIHFK----------ESKKLLYQKISG 128 Query: 130 FTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 NIE +DK + G +++ P + + TN+ I+E RLRIP + + Sbjct: 129 -------NIEVDLQDKTCMKMLGYKNLQKKPSAVIITQTNKSDWLIRECNRLRIPTICFI 181 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 DTN+ L Y I GN ++++ + L + A GI Sbjct: 182 DTNTMSMLYTYSIVGNSNTNKHLNLILLFIYHAIFQGI 219 >gi|198424928|ref|XP_002126843.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S2 (S2mt) (MRP-S2) [Ciona intestinalis] Length = 278 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 39/219 (17%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++L S V FGH+ N M+ Y++ R I DL QT+ + +AL ++ Sbjct: 81 TMKKLFFSRVYFGHKKGSRNEHMQPYLYGNRLGVDIFDLDQTLEHMHRALNFVAHIAYLK 140 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILF+ Q V AAK +Y +W G++ N +S+ +L D+ L+ Sbjct: 141 GIILFIMRSQQHGHAVELAAKACGEYAHTREWQQGLLLNMGQKHRSV-RLPDICIFLS-- 197 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L D+M N+E A+ E +L+I V Sbjct: 198 -------------------------------LQDVM-----NQEHPAVAECGKLKIATVG 221 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VD+N NP ++ Y +PGNDDS S+ L+ L A G Sbjct: 222 IVDSNVNPTMITYPVPGNDDSPESVGLYLQLFQLAIQSG 260 >gi|229315904|ref|YP_002860130.1| ribosomal protein S2 [Micromonas sp. RCC299] gi|226431189|gb|ACO55594.1| ribosomal protein S2 [Micromonas sp. RCC299] Length = 215 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%) Query: 26 NPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEA 85 +P M Y+ R+ +++ +T+ QKAL + + G IL V T S V + Sbjct: 23 SPWMYPYMLGYRDKVPFLNVEETLIGTQKALVFLKSVREKKGEILIVNTHPAFSKVVKKT 82 Query: 86 AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD----LEELLNKENQGFTKKERLNIERK 141 + + VN W+GG++TNW+ + S+ + + ++ K+ F K Sbjct: 83 STILGIHYVNEHWIGGLLTNWQQLKYSVHAYKKFNSFISPIITKDIVAFP---------K 133 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVD-TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 K K+ DGI++M PD + ++ T K I+EA+RL+IP++A VD++S V+Y Sbjct: 134 YTKAKKRFDGIQNMVFKPDAIILLQATTAHKSIIEEAKRLKIPVIACVDSSSPTVSVEYP 193 Query: 201 IPGNDDSSRSIALFCDLVA 219 IP N S C L+ Sbjct: 194 IPINTYSKAFCHFLCRLLV 212 >gi|254242353|ref|ZP_04935675.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 2192] gi|126195731|gb|EAZ59794.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 2192] Length = 93 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 61/82 (74%), Gaps = 2/82 (2%) Query: 155 MGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 MGGLPD +FV+D + E++AI EA +L IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ Sbjct: 1 MGGLPDALFVIDVDHERIAITEANKLGIPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLY 60 Query: 215 CDLVASAAIDGIARQHSYMGAD 236 + +A A I G +Q + AD Sbjct: 61 LNSMAEAVIRG--KQGAATSAD 80 >gi|289741867|gb|ADD19681.1| mitochondrial ribosomal protein S2 [Glossina morsitans morsitans] Length = 265 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 46/232 (19%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L + V +GH+ + +M +I+ R I DL +T L+ AL + + R Sbjct: 68 FSVRDLFNARVHYGHKEGSLDDRMRPFIYGSRLGHLIFDLDKTASHLRDALNITAHIAFR 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G I F + + V + A + ++ W GG+ TN ++ +L Sbjct: 128 DGIICFFNRNALNAHIVEKKAMEAGEFSYTKFWRGGIFTNANVQFGAVTRL--------- 178 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA----IQEARRLR 181 PDL ++T LA ++++ ++ Sbjct: 179 ---------------------------------PDLCIFLNTQNNILAQHTAVRDSAKMA 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP + +VD+N NP+L+ Y +PGNDD+ +I L+C+L +A + G ++ ++ Sbjct: 206 IPTIGIVDSNCNPNLITYPVPGNDDTPCAIELYCNLFKAAILRGKQKRREFL 257 >gi|242020264|ref|XP_002430575.1| mitochondrial 28S ribosomal protein S2, putative [Pediculus humanus corporis] gi|212515747|gb|EEB17837.1| mitochondrial 28S ribosomal protein S2, putative [Pediculus humanus corporis] Length = 229 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 46/224 (20%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FTI+ L + V +GH+ N M++Y+F R I DL T LQKAL + + Sbjct: 2 FTIKDLFNARVHYGHKISSLNDNMKQYLFGSRLGHLIFDLDITSQHLQKALNFTAHVAYQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ + + V + A +Y V +W T V ++ +L Sbjct: 62 NGIILFISKNPRFTLVVEKTAVACQEYAVTREWNAFTFTGSYRVFENYIRL--------- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL----AIQEARRLR 181 PDL ++T +E A+++A ++ Sbjct: 113 ---------------------------------PDLCIFLNTLQENCEQHPAVKDAAKMC 139 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP +A+ DTN +P+L+ + +PGNDDS SI L+C L +A + G Sbjct: 140 IPTIAITDTNCDPNLITFPVPGNDDSIESINLYCKLFKNAILAG 183 >gi|213022462|ref|ZP_03336909.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 87 Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 41/79 (51%), Positives = 55/79 (69%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKG 60 Query: 68 RILFVATKSQASDCVMEAA 86 +ILFV TK AS+ V EAA Sbjct: 61 KILFVGTKRAASEAVKEAA 79 >gi|160688767|gb|ABX45183.1| ribosomal protein S2 [Polysphondylium pallidum] Length = 244 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 18/218 (8%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 + L S G + WNP + +I+ R +I++L TV L+++L +I + + G+I Sbjct: 19 EFLRSEFYIGCKKSRWNPLLIGFIYKLRKKIYILNLEYTVFQLRRSLNMIKNIIRNRGQI 78 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 L V K + S+ V K+S Q V+ K+ G + ++K + ++LL +++ G Sbjct: 79 LMVMIKKKISNLVKTLLKKSKQGYVDYKYYNGSLIHFK----------ESKKLLYQKSTG 128 Query: 130 FTKKERLNIERK-RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 NIE ++K + G +++ P + + TN+ I+E RL+IP + + Sbjct: 129 -------NIEVDLKEKTFIKMLGYKNLQKKPSAVIITQTNKSDWLIRECNRLKIPTICFI 181 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 D+N+ L Y I GN ++++ + L + A GI Sbjct: 182 DSNTMSLLYTYSIVGNSNTNKHLNLILLFIYHAIFQGI 219 >gi|41179035|ref|NP_958391.1| ribosomal protein S2 [Chlamydomonas reinhardtii] gi|32699654|sp|O47027|RR2A_CHLRE RecName: Full=30S ribosomal protein S2, chloroplastic gi|2887384|emb|CAA76245.1| ORF570 (rps2-like) [Chlamydomonas reinhardtii] gi|28269758|tpg|DAA00936.1| TPA_inf: ribosomal protein S2 [Chlamydomonas reinhardtii] Length = 570 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 15/133 (11%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNT--------------HIIDLSQ 47 A + ++RQ+L+SG+ +G + N +M+ Y++ + T ++I+L + Sbjct: 309 AFVRSSLRQMLKSGMHYGEKAIKCNARMKNYVWTRKKGTDTKVEARPLIKKGRNLINLLK 368 Query: 48 TVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNW 106 T L KAL ++ A+G LFV TK AS V AA S + + VN++WLGGM+TNW Sbjct: 369 TRRCLTKALAQLTKYAAKGKTFLFVGTKKAASGLVARAALFSKKAFFVNTRWLGGMLTNW 428 Query: 107 KTVSQSIQKLRDL 119 KT+ +SI K+R + Sbjct: 429 KTILKSISKIRPI 441 >gi|296419931|ref|XP_002839545.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635706|emb|CAZ83736.1| unnamed protein product [Tuber melanosporum] Length = 311 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 89/207 (42%), Gaps = 25/207 (12%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ + SG GH LWNP RYI R+N HII L L++A +V+ Sbjct: 119 ITLELFMASGAHLGHLTSLWNPGNARYIHGIRDNIHIISLETIAAHLRRAARVVEGITRA 178 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG I+F+ T+ CV+ AAK V W+ G +TN LL K Sbjct: 179 GGFIVFIGTREGQERCVINAAKMCGGAHVFDWWIAGTITN-------------AHNLLRK 225 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN--REKLAIQEARRLRIP 183 R +ER +L I D G + VV N +A+ E +P Sbjct: 226 ---------RKVVERDMADRVVSLKPIDD-GRVVVPDLVVVLNPMENSVALHECALAGVP 275 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRS 210 + +VDT+ +P V Y IP NDDS R+ Sbjct: 276 TIGIVDTDMDPLRVTYPIPCNDDSLRA 302 >gi|58266890|ref|XP_570601.1| ribosomal protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110594|ref|XP_776124.1| hypothetical protein CNBD1720 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258792|gb|EAL21477.1| hypothetical protein CNBD1720 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226834|gb|AAW43294.1| ribosomal protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 307 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 40/223 (17%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL SG GH + + YI+ +R IIDL QT+P+L++ ++ D V Sbjct: 98 EATLSTLLASGAALGHAANITSHAYTPYIYGKRAGLSIIDLDQTLPILRRTAALVKDIVK 157 Query: 65 RGGRILFVATKSQASDCVMEAAKR--SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +L V T+ + +A +R + V +W+ G++TN +T ++ L Sbjct: 158 ADGVVLIVGTRPGHQKMIQKAKERLEDNGFAVG-QWIPGLLTNAET-------FFGMKPL 209 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L+K + PDL+ ++ + AI+E I Sbjct: 210 LDKSYK------------------------------PDLVIFLNASENTPAIRECTSRHI 239 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P V +VDT+++P LV Y IP N +S R+ L ++ A +G Sbjct: 240 PTVGIVDTDTDPRLVTYPIPANMESMRTAELIISTLSIAGQEG 282 >gi|314908360|gb|ADT62127.1| ribosomal protein S2 [Isoetes engelmannii] Length = 232 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 31/221 (14%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 R L + GHR ++ +E I+ + +T+ L++A +I+ + G Sbjct: 12 RLLPSTHAYLGHRIPIFKDSLE-----------ILQIEKTLICLRRACNLIASIIRGEGH 60 Query: 69 ILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V + S V AKR+ Q ++ +W+GG++TNW + + DL++ Sbjct: 61 FVLVNANANKVYSKIVQGTAKRTNQSYIDHEWIGGVLTNW-------EHMIDLQK---HG 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + T L+ RK +K L GI +P+ + V++ N +AI EA +LRIPIV+ Sbjct: 111 DDALTSSPFLDYLRK---MKNCLGGIMT-HRIPNCLVVMNANLSSMAILEADQLRIPIVS 166 Query: 187 VVD---TNSNPDLVDYVIPGND-DSSRSIALFCDLVASAAI 223 VD +N +L+ Y IP ND DS + + LFC+LV I Sbjct: 167 PVDCHISNGLHELITYPIPVNDYDSIQFVYLFCNLVTKTVI 207 >gi|324519945|gb|ADY47523.1| 28S ribosomal protein S2 [Ascaris suum] Length = 254 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 90/222 (40%), Gaps = 46/222 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I + + V +GH+ N KM+ ++ ER I DL T L KAL IS RGG Sbjct: 64 IEDMFHARVHYGHKIGTLNEKMKWSLYGERLGICIFDLDITRKYLIKALNFISHVAYRGG 123 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV++ + A +Y KW G +TN + Sbjct: 124 VILFVSSDRNNMLMIERMASLVGEYSHVRKWQEGTLTNSR-------------------- 163 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL----AIQEARRLRIP 183 Q F RL PD + + T L A+ EA ++ IP Sbjct: 164 QLFGAPIRL----------------------PDTIIFLSTLTSVLETHPAVIEAAKMAIP 201 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 V VVD+NS+P + Y IPGNDDS+ S+ F +L A G Sbjct: 202 SVGVVDSNSDPSYISYAIPGNDDSTPSVEYFMNLFVRAIETG 243 >gi|321258065|ref|XP_003193802.1| ribosomal protein [Cryptococcus gattii WM276] gi|317460272|gb|ADV22015.1| ribosomal protein, putative [Cryptococcus gattii WM276] Length = 307 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 40/223 (17%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL SG GH + + YI+ +R IIDL QT+P+L++ ++ D V Sbjct: 98 EATLSTLLASGAALGHAANITSHAYTPYIYGKRAGLSIIDLDQTLPILRRTAALVKDIVK 157 Query: 65 RGGRILFVATKSQASDCVMEAAKR--SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +L V T+ + +A +R + V +W+ G++TN +T ++ L Sbjct: 158 ADGVVLIVGTRPGHQKMIQKAKERLEDNGFAVG-QWIPGLLTNAET-------FFGMKPL 209 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L+K + PDL+ ++ + AI+E I Sbjct: 210 LDKSYK------------------------------PDLVIFLNASENTPAIRECTSRHI 239 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 P +VDT+++P LV Y IP N +S R+ L ++ A +G Sbjct: 240 PTAGIVDTDTDPRLVTYPIPANMESLRTAELIISTLSIAGQEG 282 >gi|331248766|ref|XP_003337005.1| 37S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315995|gb|EFP92586.1| 37S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 374 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 23/238 (9%) Query: 17 QFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 GH L P I+ R++ IID QT+ L++A VI +TV G +LF S Sbjct: 139 HLGHNKALTCPTNFPLIYGVRSDIAIIDARQTLSYLRRACNVIRETVFNDGIVLF----S 194 Query: 77 QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERL 136 +A K++++ ++ + G+ N K S L + E+L + Q K+ RL Sbjct: 195 NGVPGTEKAIKQASERLADNGYSLGIRPNGKGASWVRGTLTNATEVLKRPRQ-VAKQLRL 253 Query: 137 ------------NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N + +R+K ++A + + + LP L+ + + ++ ++EA +IP Sbjct: 254 ANPSSSSSSSGSNEDPQRNKQQQA-ENLEALKFLPSLIVLFNPRESRVLLREAALKQIPT 312 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH-----SYMGADT 237 +A++D++ +P +V Y IP NDDS RS+ L +++ A +G+ ++ ++ G+D+ Sbjct: 313 IAIIDSDVDPRVVTYPIPANDDSVRSVQLIAGVLSRAGQEGLLKRKESLLSTFPGSDS 370 >gi|296040606|gb|ADG85271.1| ribosomal protein S2 [Silene latifolia] Length = 90 Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 56/90 (62%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG + L Sbjct: 1 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDAASRGKKFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK++A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKNKAADLVAWAAIRARCHYVNKKWLGG 90 >gi|205373403|ref|ZP_03226207.1| 30S ribosomal protein S2 [Bacillus coahuilensis m4-4] Length = 92 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 35/68 (51%), Positives = 51/68 (75%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A +V+ + A Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYKVMREIAAND 64 Query: 67 GRILFVAT 74 G+ILFV T Sbjct: 65 GKILFVGT 72 >gi|290462943|gb|ADD24519.1| 28S ribosomal protein S2, mitochondrial [Lepeophtheirus salmonis] Length = 232 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 37/220 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++ L + V GH +P M+ +I+ R + IIDL QT L++AL ++ R Sbjct: 39 FSVEDLFRARVHMGHVTGSIHPHMKPFIYGTRFGSTIIDLDQTALHLREALNFLAHIANR 98 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV + Q AA S +Y W + + + + +L D +++ Sbjct: 99 KGIILFVCRQPQFVHMTEVAALSSGEYAHCRTWSHKLFGDPRASYKCEVRLPDAVIMVHT 158 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N G++ E A+ +A + IP + Sbjct: 159 KN-----------------------GVK--------------YDEHGAVVDAAKAGIPTI 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VD++ NP+++ Y IPGNDDS SI L+ DL A + G Sbjct: 182 GIVDSDCNPNIISYPIPGNDDSIPSIRLYLDLFQKAILLG 221 >gi|213517417|gb|ACJ50123.1| ribosomal protein S2 [Chlamydomonas reinhardtii] Length = 910 Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 23/163 (14%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNT--------------HIIDLSQ 47 A + ++RQ+L+SG+ +G + N +M+ Y++ + T ++I+L + Sbjct: 309 AFVRSSLRQMLKSGMHYGEKAIKCNARMKNYVWTRKKGTDTKVEARPLIKKGRNLINLLK 368 Query: 48 TVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNW 106 T L KAL ++ A+G LFV TK AS V AA S + + VN++WLGGM+TNW Sbjct: 369 TRRCLTKALAQLTKYAAKGKTFLFVGTKKAASGLVARAALFSKKAFFVNTRWLGGMLTNW 428 Query: 107 KTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 KT+ +SI K+R + KE Q K +I KR +K L Sbjct: 429 KTILKSISKIRPIL----KEKQMIIK----DILEKRQTIKARL 463 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 6/99 (6%) Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD------LMFVVDTNREKL 172 ++ + +K+ +KK + ++K +L++ L GI +M + + + ++ E Sbjct: 784 MDSIYDKKLSRQSKKVAASRKKKWQRLEKYLGGISNMTKIKEKQIANNVAIIIGQQEEMN 843 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 A++E ++L I + +VDTN NP L D+ IP NDD+ SI Sbjct: 844 AVRECQKLGIKMFHIVDTNCNPGLADHFIPANDDARNSI 882 >gi|296040612|gb|ADG85274.1| ribosomal protein S2 [Silene vulgaris] Length = 90 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 56/90 (62%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV FGH WNP+M YI + HI++L++T L +A ++ D +RG + L Sbjct: 1 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLSEACDLVFDAASRGKQFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK++A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKNKAADLVAWAAIRARCHYVNKKWLGG 90 >gi|246880780|gb|ACS95092.1| ribosomal protein S2 [Dunaliella salina] Length = 878 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 12/125 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-----------NNTHIIDLSQTVPMLQKA 55 +IR++L G+ FG + + +M++YI+ + H+I+L +T L KA Sbjct: 285 SIREMLAHGMHFGEKTVKCHARMKQYIWLHKQGQNKNRPFVKKGQHVINLLKTRRCLNKA 344 Query: 56 LQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNWKTVSQSIQ 114 L ++ +G LF+ TK A+ V A+ + + VN++WLGGM+TNWKT+ +SI Sbjct: 345 LSTLTKYALKGRTFLFIGTKKPAAGLVARASFFTKNSFYVNTRWLGGMLTNWKTICKSIS 404 Query: 115 KLRDL 119 K+R + Sbjct: 405 KIRPI 409 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 144 KLKRALDGIRDMGGL------PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLV 197 +L++ GI +M L ++ ++ E A++E +L + +VDTN +P L Sbjct: 777 RLEKYFGGIANMTKLSQTKISKNVAIIIGQKEEMNAVRECNKLGLKTFTIVDTNCDPTLS 836 Query: 198 DYVIPGNDDSSRSI 211 D++IP NDDS SI Sbjct: 837 DHIIPANDDSRNSI 850 >gi|296040604|gb|ADG85270.1| ribosomal protein S2 [Silene conica] Length = 90 Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 55/90 (61%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG + L Sbjct: 1 MEAGVHFGHGIRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDAASRGKQFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK +A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKRKAADLVAWAAIRARCHYVNKKWLGG 90 >gi|301500885|ref|YP_003795297.1| ribosomal protein S2 [Chromera velia] gi|300069431|gb|ADJ66539.1| ribosomal protein S2 [Chromera velia] Length = 286 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 19/234 (8%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI +L+++ + GH LWN +M Y++ HIID+ QT ++ K + T Sbjct: 6 TIPELVKANIHLGHHYGLWNRQMLPYLYGIWKGFHIIDVLQTARLISKTYFYLLRTSQNA 65 Query: 67 GR-ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQ-----------SIQ 114 R LF+ T +AA+ + + ++ + G++TNW + Q ++ Sbjct: 66 NRHFLFIGTNPLIKSVTKKAAQTAGCFFIDHEVTSGLLTNWLVMKQRKFLFEFLDQITLP 125 Query: 115 KLRDLEELL---NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREK 171 +R + +L ++E Q F + + + L L+G++ + LP VD + Sbjct: 126 VIRAILPILINRSEEEQEFF----VTLLTRHQILWSELNGLKGLVTLPRCFIFVDPIYDY 181 Query: 172 LAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +A L+ +V +VD+N NP+ IP N+D+ ++ + +++A G Sbjct: 182 ELFAQALILKRTLVGLVDSNCNPEHFVAPIPANNDNFMAVKFIFEFLSTAIYRG 235 >gi|325846780|ref|ZP_08169695.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481538|gb|EGC84579.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 104 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/71 (49%), Positives = 53/71 (74%) Query: 155 MGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 M LPD +FVVD + E++A+ EA+ L IP++++VDTN +PD+VD IPGNDD+ R++ L Sbjct: 1 MEELPDALFVVDPSNEQIAVHEAKILGIPVISIVDTNCDPDVVDIAIPGNDDAIRAVKLI 60 Query: 215 CDLVASAAIDG 225 ++A A I+G Sbjct: 61 TSVMADAVIEG 71 >gi|253807631|gb|ACT36209.1| ribosomal protein S2 [Helicosporidium sp. ex Simulium jonesi] Length = 286 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 36/230 (15%) Query: 13 ESGVQFGH-----RNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 E G Q+GH R + W+P M I RN II T+ L +A +IS + G Sbjct: 34 ELGTQYGHLFQDIRYYQWHPFMSSSILGLRNGRPIISAQVTLRSLCRAFFLISHIFLKNG 93 Query: 68 RILFVATKSQASDCVMEAAKRSA--------------QYCVNSKWLGGMMTNWKTVSQSI 113 +L V T + + + K+ YC + KW+GG +TN+ +S+SI Sbjct: 94 NLLIVNTNPKYTKLCNKLFKQKNSSSSVKNSIKKKGISYCFH-KWIGGTLTNYDQISKSI 152 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRD----------------MGG 157 ++L + + K K ++ ++L G + + G Sbjct: 153 YYFMMFKKLYHYLRKNRITKLNFKEFPKYKRICKSLKGYMNRELITRNNSINRYSITLSG 212 Query: 158 LPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 PDL+ ++ I EA RL IP++A+V+ + N + Y IP N++S Sbjct: 213 KPDLILCMNPQDNLSLINEAYRLNIPVIALVEPHINIKKITYPIPCNNNS 262 >gi|328479946|gb|EGF48997.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus MTCC 5462] Length = 74 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 46/70 (65%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + + Sbjct: 4 LSMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDDAYNFVKEEAQN 63 Query: 66 GGRILFVATK 75 GG LFV TK Sbjct: 64 GGVFLFVGTK 73 >gi|239994187|ref|ZP_04714711.1| ribosomal protein S2 [Alteromonas macleodii ATCC 27126] Length = 84 Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 48/64 (75%) Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +FV+D + E +A+ EAR L IP+V VVDTNSNPD VDY+IPGNDD+ R+I L+ D A+A Sbjct: 2 IFVIDADHEHIAVTEARNLGIPVVGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLDAAANA 61 Query: 222 AIDG 225 G Sbjct: 62 INSG 65 >gi|241862476|ref|XP_002416382.1| ribosomal protein, putative [Ixodes scapularis] gi|215510596|gb|EEC20049.1| ribosomal protein, putative [Ixodes scapularis] Length = 173 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 62/124 (50%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+L E+ GH+ L N M+ YIF R HIIDL QTVP L +AL + R Sbjct: 23 SVRELFEARAHLGHKEGLLNDLMKPYIFGSRLGHHIIDLDQTVPHLFRALNFAAHIAYRD 82 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV Q S V E AK ++ W G+ N + ++ +L DL LL+ Sbjct: 83 GIILFVTRNQQTSHMVEETAKACGEFAHTRWWRPGLFPNSERQFGTVTRLPDLVVLLSTL 142 Query: 127 NQGF 130 + F Sbjct: 143 DTVF 146 >gi|253795685|ref|YP_003038781.1| putative 30S ribosomal subunit protein S2 [Candidatus Hodgkinia cicadicola Dsem] gi|253739993|gb|ACT34328.1| putative 30S ribosomal subunit protein S2 [Candidatus Hodgkinia cicadicola Dsem] Length = 398 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 12/213 (5%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 LL SGV +G R P + + ++++ VP L+ AL ++ + VA GG Sbjct: 16 SLLASGVYYGRRA----PAAKSALLALGSWGEFSVLNIGGAVPALELALGLMFEKVAHGG 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEELLNKE 126 ++LFV ++S + V E + QY V +K GG++TNW T +++ R+L + + Sbjct: 72 KVLFVCSRSVDPEVVGELLAGAGQY-VMTKPTGGVLTNWLTFKGVGERVKRELRKASASK 130 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 N+ K ++ + L G+ P ++ V + ++EA L +P+V Sbjct: 131 NKRILKL----CLKQASRAASLLAGVAKRATPPSMVVVFCEACDACVVKEANVLGVPVVG 186 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + D ++ +DYV+P + S + C L+A Sbjct: 187 IADATASVRGIDYVVPVSSSSKPADEFVCQLMA 219 >gi|16603884|gb|AAL27190.1| ribosomal protein subunit 2 [Pterospora andromedea] Length = 119 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 3/118 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +D V+ AA R+ + VN KW+GGM+TNW T Sbjct: 1 FLSEACDLVFDAASVGKQFLIVGTKKIVADLVVRAAIRARCHYVNKKWIGGMLTNWSTTE 60 Query: 111 QSIQKLRD--LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + +QK RD +E+ + K Q KK+ + ++R+ L GI+ M LPD++ ++D Sbjct: 61 KRLQKFRDVRMEQKMGKL-QYLPKKDAVKLKRELSHFMAYLGGIKYMTELPDVVIILD 117 >gi|16603882|gb|AAL27189.1| ribosomal protein subunit 2 [Pterospora andromedea] Length = 118 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 3/118 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +D V+ AA R+ + VN KW+GGM+TNW T Sbjct: 1 FLSEACDLVFDAASVGKQFLIVGTKKIVADLVVRAAIRARCHYVNKKWIGGMLTNWSTTE 60 Query: 111 QSIQKLRD--LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + +QK RD +E+ + K Q KK+ + ++R+ L GI+ M LPD++ ++D Sbjct: 61 KRLQKFRDVRMEQKMGKL-QYLPKKDAVKLKRELSHFMAYLGGIKYMTELPDVVIILD 117 >gi|225461465|ref|XP_002282433.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 220 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 39/227 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL + G R L + Y + RN +ID +T+ ++ A ++ Sbjct: 1 MTIHSLVIQKLLSTNAHMGRR--LVEHHFKVYTYGFRNGCAVIDSDKTLICMRNACDFMA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKW-LGGMMTNWKTVSQSIQKLRDL 119 V + GR LFV T S + V + ++ + ++ W LGG +TN S S +K R Sbjct: 59 SLVRQKGRFLFVNTNSLFDEIVEQMTRKIGCFTPDAPWRLGGFLTN----SSSPKKFRS- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 R I PD + ++DT R+ IQEA R Sbjct: 114 ---------------------------RNKKIIFGPSQPPDCVVILDTERKSSVIQEASR 146 Query: 180 LRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAI 223 L IPIV+VVD + D + Y IP DS + + LFC+L+ + Sbjct: 147 LEIPIVSVVDPSMPLDTFKKIAYPIPAK-DSVQFVYLFCNLITKTFL 192 >gi|268554726|ref|XP_002635350.1| Hypothetical protein CBG01521 [Caenorhabditis briggsae] gi|187038161|emb|CAP22735.1| hypothetical protein CBG_01521 [Caenorhabditis briggsae AF16] Length = 257 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 46/222 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++ ++ + +GH+ N M+ ++ ER + DL T L +AL ++ RGG Sbjct: 66 VDEMFKARLHYGHKIGTVNNNMKWALYGERLGVCVFDLDITKQYLVRALNFVAHVAMRGG 125 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV + V +AA+ QY KW G +TN + +LL Sbjct: 126 MILFVTSNRDTMFDVEKAAEEVGQYSHVRKWQSGTLTNTR-------------QLLGA-- 170 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLRIP 183 +R LPD +F + T AI EA ++ IP Sbjct: 171 -----------------------SVR----LPDAVFFLSTLTSLGENHPAIIEAAKMTIP 203 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + VVD+NS+P + Y+IP NDD+ +S + A G Sbjct: 204 TIGVVDSNSDPAYLTYLIPANDDTPQSTEYLLRMFKEAIRKG 245 >gi|255562794|ref|XP_002522402.1| 30S ribosomal protein S2, putative [Ricinus communis] gi|223538287|gb|EEF39894.1| 30S ribosomal protein S2, putative [Ricinus communis] Length = 110 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 3/100 (3%) Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKE 126 L V+TK++A+D V AA R+ + VN KWLGG++TNW T +QK RDL E+ + Sbjct: 11 FLIVSTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTKTRLQKFRDLRMEQKTGRL 70 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 N+ K + ++R+ L+ L GI+ M GLPD++ +VD Sbjct: 71 NR-LPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVD 109 >gi|296040610|gb|ADG85273.1| ribosomal protein S2 [Silene paradoxa] Length = 90 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 54/90 (60%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+ V FGH WNP+M YI + HII+L++T L +A ++ D +RG + L Sbjct: 1 MEARVHFGHGIRKWNPRMSPYISAKCKGMHIINLTRTARFLSEACDLVFDAASRGKQFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK+ A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKNIAADLVAWAAIRARCHYVNKKWLGG 90 >gi|242035259|ref|XP_002465024.1| hypothetical protein SORBIDRAFT_01g030646 [Sorghum bicolor] gi|241918878|gb|EER92022.1| hypothetical protein SORBIDRAFT_01g030646 [Sorghum bicolor] Length = 118 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 26 NPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEA 85 NPKM YI + THI +L++T L +A ++ D ++G L V TK +A++ V A Sbjct: 1 NPKMALYISAKCKGTHIANLARTTRFLSEACDLVFDAASQGKSFLIVGTKKRATNLVASA 60 Query: 86 AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EELLNKENQ 128 RS + N KW GM+TNW + + RDL EE + K + Sbjct: 61 VIRSCYHYANKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGKFHH 105 >gi|221142490|ref|ZP_03566983.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 95 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 47/64 (73%) Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +FVVD +E+ AI EAR+L IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A Sbjct: 1 LFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADA 60 Query: 222 AIDG 225 ++G Sbjct: 61 ILEG 64 >gi|22550359|ref|NP_689382.1| ribosomal protein S2 [Chaetosphaeridium globosum] gi|22417025|gb|AAM96624.1|AF494279_29 ribosomal protein S2 [Chaetosphaeridium globosum] Length = 191 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 45/217 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERY-IFCERNNTH-IIDLSQTVPMLQKALQVISDTVAR 65 I +LL+ G R L + RY ++ R+NT I DL +T+ +++A + + + Sbjct: 9 ISKLLKINAHLG-RPKLRTSHVSRYFLYGLRSNTRAIFDLEKTLTCIRRACHFLESILDK 67 Query: 66 GGRILFVA--TKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G ILFV+ S + + E A ++ Q + +KW+GG++TNWK +S Sbjct: 68 QGCILFVSEGPNSPYNAIIKETALKTNQSFITTKWIGGLLTNWKHISY------------ 115 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 L+ +R P + V + AIQEA L IP Sbjct: 116 ---------YNHLSYDR------------------PSCLIVFNPCLNFTAIQEANTLGIP 148 Query: 184 IVAVVDTNSNPDL-VDYVIPGNDDSSRSIALFCDLVA 219 +V+++++N L +DY IP N +S I LFC+L+ Sbjct: 149 VVSLMNSNVPNHLKIDYPIPVNHNSISFIYLFCNLIV 185 >gi|16603878|gb|AAL27187.1| ribosomal protein subunit 2 [Pterospora andromedea] gi|16603880|gb|AAL27188.1| ribosomal protein subunit 2 [Pterospora andromedea] Length = 118 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 3/118 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +D V+ AA R+ + VN KW+GGM+TNW T Sbjct: 1 FLSEACDLVFDAASVGKQFLIVGTKKIVADLVVRAAIRARCHYVNKKWIGGMLTNWSTTE 60 Query: 111 QSIQKLRD--LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + +QK RD +E+ + K Q KK+ ++R+ L GI+ M LPD++ ++D Sbjct: 61 KRLQKFRDVRMEQKMGKL-QYLPKKDAGKLKRELSHFMAYLGGIKYMTELPDVVIILD 117 >gi|255524241|ref|ZP_05391200.1| 30S ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296185362|ref|ZP_06853772.1| putative ribosomal protein S2 [Clostridium carboxidivorans P7] gi|255512066|gb|EET88347.1| 30S ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296050196|gb|EFG89620.1| putative ribosomal protein S2 [Clostridium carboxidivorans P7] Length = 80 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 48/64 (75%) Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +F+VD +EK AI EA+ L IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A Sbjct: 9 LFIVDPRKEKNAILEAKILGIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITAKMADA 68 Query: 222 AIDG 225 I+G Sbjct: 69 IIEG 72 >gi|240280823|gb|EER44327.1| mitochondrial ribosomal protein subunit S2 [Ajellomyces capsulatus H143] Length = 267 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 51/100 (51%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 153 ITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVARN 212 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 GG ILFV T+ V+ AA+R+ V +W+ G +TN Sbjct: 213 GGLILFVGTRKGQRRIVVNAAERAKGCHVFQRWIPGSLTN 252 >gi|308072473|dbj|BAJ22098.1| ribosomal protein S2 [Cycas taitungensis] Length = 216 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 30/224 (13%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++LL + G R ++ K+ YI+ N I+D +T+ L+ A I + + Sbjct: 7 LVLQKLLSTNAHLGRRVAAYHSKV--YIYGFGNEIAILDSDKTLICLRNACHFIGSLIRK 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSA-QYCVNS-KW-LGGMMTNWKTVSQSIQKLRDLEEL 122 GR+LFV T S + + + A + C+N +W +GG +T++ ++ +K+R L Sbjct: 65 KGRLLFVNTNSLFDEIIEQMALSLIDRSCINDYQWRIGGFLTDYSSMHLFPKKIRFLRPG 124 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K N F LN +R PD + +++ +RE I A RL+I Sbjct: 125 NKKIN--FFGGSGLN-QR------------------PDCVVIMNADRESSVILGADRLQI 163 Query: 183 PIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAI 223 PIV++VD+N L + Y IP N DS + + LFC+L+ + Sbjct: 164 PIVSLVDSNIPLGLCKGITYPIPAN-DSIQFVYLFCNLITKTVL 206 >gi|108773056|ref|YP_635965.1| ribosomal protein S2 fragment a [Scenedesmus obliquus] gi|122225254|sp|Q1KVV9|RR2A_SCEOB RecName: Full=30S ribosomal protein S2, chloroplastic 1 gi|88696622|gb|ABD48248.1| ribosomal protein S2 fragment a [Scenedesmus obliquus] Length = 532 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 34/174 (19%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYI---------FCERNNT------------ 40 A+ + T++++++S + FG + N M +YI + NT Sbjct: 271 AMVKETVQKMIQSSMHFGEKAIRCNANMRKYIWYRKKGLGMYTNSKNTFVSIKETKKPMV 330 Query: 41 ----HIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVN 95 H++++ +T +AL+ ++ A+G LFV TK A+ V + A S + VN Sbjct: 331 KRGRHVLNVLKTQRCFAEALKQLAKYAAKGKTFLFVGTKKPAASLVAKTALLSNTSFFVN 390 Query: 96 SKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 ++WLGGM+TNWKT+ +SI ++R + K+ Q +K I KR+K++R L Sbjct: 391 TRWLGGMLTNWKTILKSISQIRPIL----KQKQKILQK----ILEKREKIQRRL 436 >gi|71020705|ref|XP_760583.1| hypothetical protein UM04436.1 [Ustilago maydis 521] gi|46100471|gb|EAK85704.1| hypothetical protein UM04436.1 [Ustilago maydis 521] Length = 329 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 26/197 (13%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQ-TVPMLQKALQVISDTV 63 + T+ L+ S Q GH + YI+ +R+ I DL + T+P L++A V+ Sbjct: 115 KLTLSHLVASTAQVGHSLSSLKAANQPYIYGQRHGVAIFDLERATLPALRRAASVVKAVA 174 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQ---YCVNSKWLGGMMTNW-KTVSQSIQKLRDL 119 R G ILFV T+ V+ A KR A + +W+ G++TN K ++ +I L+ L Sbjct: 175 ERDGVILFVGTRPGQQAAVLAATKRLAGNGFHVTAERWMPGVITNAPKLLASAI--LKSL 232 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L + G RL + + PDL+ V++ AI+EA + Sbjct: 233 HDL---DPTGTANTNRLASQTLQ----------------PDLVIVLNPIENSFAIREATQ 273 Query: 180 LRIPIVAVVDTNSNPDL 196 IP +A+ D++ +P + Sbjct: 274 ANIPTIAITDSDVDPSV 290 >gi|323133471|gb|ADX30746.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 7/109 (6%) Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKE 134 +D V AA ++ + VN KWLGGM+TNW T + + KLRDL+ K G K++ Sbjct: 2 ADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLHKLRDLK---IKHKMGRLKQLKKRD 58 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 59 VTGLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|292559470|ref|YP_003540838.1| ribosomal protein S2 [Hartmannella vermiformis] gi|290775723|gb|ADD62222.1| ribosomal protein S2 [Hartmannella vermiformis] Length = 225 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 33/230 (14%) Query: 1 MALPQFTIRQLLESGVQFGH-----RNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKA 55 M + + QL+ + V GH NF YI R + +I S+ V +KA Sbjct: 1 MKIIKLKFSQLVYNSVHIGHPLSQSSNF-----STWYIHGVRYSNLLISPSKMVFFWKKA 55 Query: 56 LQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQK 115 +S ++ G +LFV + + Q + +KW GG++TNWK V ++K Sbjct: 56 CLGLSYLSSKFGSVLFVNLDPALNYLLHRMNNVIQQPMILNKWRGGLLTNWKFVF--LRK 113 Query: 116 LRDLEE--LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + D ++ +N +Q F + +R LP +F + N LA Sbjct: 114 IPDFKKGIFINTWSQEF------------------MQNLRGATRLPSAVFTFNVNGNLLA 155 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++EAR + +PI ++ D+ S+ + Y +PGNDD+ SI FC + S AI Sbjct: 156 VKEARTVNLPIFSLSDSTSDTSNILYPLPGNDDAVSSIT-FCSVTVSKAI 204 >gi|16603892|gb|AAL27194.1| ribosomal protein subunit 2 [Pleuricospora fimbriolata] gi|16603894|gb|AAL27195.1| ribosomal protein subunit 2 [Pleuricospora fimbriolata] Length = 116 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 3/117 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG ++L V TK+ +D V AA+R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGDQLLIVGTKNIVADFVARAARRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + ++K RDL EL + K R +R+ L+ GI+ M GLPD++ ++D Sbjct: 61 KRLRKFRDLRMELKMGRLKRIPKNTRF--KRQLAHLQAYFGGIQYMRGLPDIVIILD 115 >gi|154301336|ref|XP_001551081.1| hypothetical protein BC1G_10338 [Botryotinia fuckeliana B05.10] gi|150856239|gb|EDN31431.1| hypothetical protein BC1G_10338 [Botryotinia fuckeliana B05.10] Length = 289 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 54/99 (54%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ L+ S GH LWNP +RYI+ R HII L +T L++ +V+ G Sbjct: 118 TLELLMASQSHLGHATQLWNPANQRYIYGIRQGVHIISLEETAAHLRRCAKVVEGVAYHG 177 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 G ILFV T++ V++AA+ + + ++W+ G +TN Sbjct: 178 GLILFVGTRAGQHSAVVKAAELAKGCHLFNRWVAGSITN 216 >gi|323133465|gb|ADX30743.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 7/109 (6%) Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKE 134 +D V AA ++ + VN KWLGGM+TNW T + + K RDL+ K+ G K++ Sbjct: 2 ADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLYKFRDLK---IKQKMGRLKQLNKRD 58 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++RK L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 59 VTRLKRKLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|16603886|gb|AAL27191.1| ribosomal protein subunit 2 [Sarcodes sanguinea] Length = 118 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 68/118 (57%), Gaps = 3/118 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++S ++G + L V TK + +D V+ AA ++ + VN KW+GGM+TNW Sbjct: 1 FLSEACDLVSAAASQGKQFLIVGTKKRVADLVVRAAIKARCHYVNKKWIGGMLTNWSITE 60 Query: 111 QSIQKLRD--LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + + K RD +E+ + + + K++ ++R + L GI+ M GLPD++ ++D Sbjct: 61 KRLHKFRDVRMEQKMGRL-KSIPKRDVAKLKRXLYHFQTYLGGIQYMMGLPDIVIILD 117 >gi|308496805|ref|XP_003110590.1| hypothetical protein CRE_05534 [Caenorhabditis remanei] gi|308243931|gb|EFO87883.1| hypothetical protein CRE_05534 [Caenorhabditis remanei] Length = 261 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 38/218 (17%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++ ++ + +GH+ N M+ ++ ER + DL T L +AL ++ RGG Sbjct: 71 VDEMFKARIHYGHKVGTVNNNMKWALYGERLGVCLFDLDITKQYLVRALNFVAHVSMRGG 130 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV + V +AA+ QY KW G +TN + + + +L D L+ Sbjct: 131 MILFVTSNRDTMFDVEKAAEEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVCFLST-- 188 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + AI EA ++ IP + V Sbjct: 189 ------------------------------------LTSLGENHPAIIEAAKMAIPTIGV 212 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VD+NS+P + Y++P NDD+ +S + A G Sbjct: 213 VDSNSDPAYLTYLVPANDDTPQSTEYLLRMFKEAVRRG 250 >gi|17564586|ref|NP_505180.1| hypothetical protein T23B12.3 [Caenorhabditis elegans] gi|2384913|gb|AAB69935.1| Hypothetical protein T23B12.3 [Caenorhabditis elegans] Length = 264 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 38/218 (17%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I ++ ++ + +GH+ N M+ ++ ER + DL T L +AL ++ RGG Sbjct: 74 IDEMFKARLHYGHKVGTVNNNMKWALYGERLGVCLFDLDITKKYLVRALNFVAHVSLRGG 133 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV + V +AA QY KW G +TN + + + +L D L+ Sbjct: 134 MILFVTSNRDTMFDVEKAADEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVCFLST-- 191 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + AI EA ++ IP + V Sbjct: 192 ------------------------------------LTSLGENHPAIVEAAKMAIPTIGV 215 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 VD+NS+P + Y++P NDD+ +S + A G Sbjct: 216 VDSNSDPAYLTYLVPANDDTPQSTEYLLRMFKEAVRKG 253 >gi|169617724|ref|XP_001802276.1| hypothetical protein SNOG_12043 [Phaeosphaeria nodorum SN15] gi|160703469|gb|EAT80455.2| hypothetical protein SNOG_12043 [Phaeosphaeria nodorum SN15] Length = 357 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 53/103 (51%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ LL S GH LWNP RYI R HII L T L+++ +V+ + RG Sbjct: 114 TLELLLASEAHQGHVTSLWNPANARYIHGIRQGIHIISLEVTAAHLRRSAKVVQEVCRRG 173 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV 109 G +LFV T+ V AA+ + Y + +W+ G +TN + + Sbjct: 174 GMVLFVGTRDGQDRAVARAAELAKGYHLFERWIPGSITNGQQI 216 >gi|323133459|gb|ADX30740.1| small ribosomal protein S2 [Monotropa hypopitys] gi|323133463|gb|ADX30742.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 7/109 (6%) Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKE 134 +D V AA ++ + VN KWLGGM+TNW T + + KLRDL+ K G K++ Sbjct: 2 ADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKELHKLRDLK---IKHKMGRLKQLKKRD 58 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +++ E L IP Sbjct: 59 VTGLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYISLLECITLGIP 107 >gi|255565784|ref|XP_002523881.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] gi|223536811|gb|EEF38450.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] Length = 360 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 3/105 (2%) Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL--EE 121 +R + L V TK++A+D V AA R+ + VN KWLG ++TNW T +Q +DL E+ Sbjct: 257 SRRKQFLIVGTKNKAADLVARAAIRARCHYVNKKWLGSILTNWSTTENRLQNFKDLRMEQ 316 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + N+ K + ++R+ L+ L GI+ M GLPD++ +VD Sbjct: 317 KTCRLNR-LPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVD 360 >gi|226348827|gb|ACO50731.1| ribosomal protein S2 [Micromonas pusilla CCMP1545] Length = 221 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 7/185 (3%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 Y+ R+ + +++ +KAL + A+GGRIL V T S V A + Sbjct: 24 YLCGYRDKVPFFNPEESLVATKKALVFMQRVHAKGGRILLVNTGPGLSQMVKITAAATGW 83 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDG 151 VN W+GG+MTNW + S + + R +KR +G Sbjct: 84 AYVNEHWIGGLMTNWHQLKYSSHAFHKFHKWITPLMAHTVSFPRFTKAKKR------FEG 137 Query: 152 IRDMGGLPDLMFVVD-TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 ++ + LPD++ V+ T K + E +P+V VDT S + IP N + Sbjct: 138 LKPLVRLPDVVVVLQATQTYKHILHEGLSFGVPMVTCVDTYSPMTESHFPIPVNIHNPTF 197 Query: 211 IALFC 215 C Sbjct: 198 AYFLC 202 >gi|323133461|gb|ADX30741.1| small ribosomal protein S2 [Monotropa hypopitys] gi|323133467|gb|ADX30744.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 7/109 (6%) Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKE 134 +D V AA ++ + VN KWLGGM+TNW T + + K RDL+ K+ G K++ Sbjct: 2 ADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLYKFRDLK---IKQKMGRLKQLNKRD 58 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 59 VTRLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|323133469|gb|ADX30745.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 7/109 (6%) Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKE 134 +D V AA ++ + VN KWLGGM+TNW T + + K RDL+ K+ G K++ Sbjct: 2 ADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLYKFRDLK---IKQKMGRLKQLKKRD 58 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 59 VTRLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|56754323|gb|AAW25349.1| SJCHGC05092 protein [Schistosoma japonicum] Length = 200 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 57/121 (47%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ L ++ V GHR+ L N M+ YIF R IIDL QT +L AL + R Sbjct: 57 SVTDLFQARVHMGHRSVLRNDYMKPYIFGCRQGIDIIDLDQTCSLLFDALNFTAHIAYRQ 116 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV Q V A+ +Y KW GG+ TN V +L DL LL+ Sbjct: 117 GIILFVYQNKQMLPLVERTAENVGEYSYCRKWEGGVFTNSSDVFHDSVRLPDLVLLLSTC 176 Query: 127 N 127 N Sbjct: 177 N 177 >gi|312076041|ref|XP_003140684.1| 28S ribosomal protein S2 [Loa loa] gi|307764151|gb|EFO23385.1| 28S ribosomal protein S2 [Loa loa] Length = 255 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 50/220 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I L + +GH+ N +M+ +F ER I DL +T L AL ++ RGG Sbjct: 65 IDDLFHARAHYGHKVGTVNERMKWSLFGERLGVCIFDLQKTRECLITALNFVAHMAMRGG 124 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 LF+ T V A ++ + WK + LLN Sbjct: 125 MFLFITTGRNNMLMVERKALEIDEF--------AHVRGWKE-----------DTLLNA-- 163 Query: 128 QGFTKKERLNIERKRDKLKRALDG--IRDMGGLPDLMFVVDTNREKL----AIQEARRLR 181 +AL G IR LPD + + T L A++EA ++ Sbjct: 164 -------------------KALFGAPIR----LPDTIIFLSTLTSILETHPAVREAAKMV 200 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP V VVD+N++P + Y IPGNDDS+ S+ F D A Sbjct: 201 IPTVGVVDSNADPTYITYPIPGNDDSTSSVQYFMDCFVKA 240 >gi|139390141|ref|YP_001123714.1| ribosomal protein S2 [Lobularia maritima] gi|134286918|dbj|BAF50538.1| ribosomal protein S2 [Lobularia maritima] Length = 96 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 51/82 (62%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D ++G Sbjct: 10 LEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASKGK 69 Query: 68 RILFVATKSQASDCVMEAAKRS 89 + L V TK++A+D V AA R+ Sbjct: 70 QFLIVGTKNKAADLVSRAAIRA 91 >gi|224503676|ref|ZP_03671983.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL R2-561] Length = 65 Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 44/65 (67%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGG 67 + G Sbjct: 61 ASDNG 65 >gi|255546866|ref|XP_002514491.1| 30S ribosomal protein S2, putative [Ricinus communis] gi|223546390|gb|EEF47891.1| 30S ribosomal protein S2, putative [Ricinus communis] Length = 114 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 55/96 (57%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K + ++R+ L+ L GI+ M GLPD++ +VD + A++E L IP + ++D Sbjct: 11 LPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECITLGIPTICLID 70 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 TN +PDL D IP NDD+ SI L + + A +G Sbjct: 71 TNCDPDLADISIPANDDTIASIRLILNKLVFAICEG 106 >gi|255565956|ref|XP_002523966.1| utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis] gi|223536693|gb|EEF38334.1| utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis] Length = 624 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 82/286 (28%), Positives = 127/286 (44%), Gaps = 52/286 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL + G R + K+ Y + RN+ IID +T+ L+ A IS Sbjct: 1 MTIHSIVIQKLLSTNAHLGRRVAAQHFKI--YTYGIRNSQAIIDSDKTLICLRNAASFIS 58 Query: 61 DTVA-RGGRILFVATKSQASDCVMEAAKRSAQYCV--NSKW-LGGMMTNWKTVSQSIQKL 116 + R LFV T + V + K+ Y N W +GG +TN Sbjct: 59 HLARDKKARFLFVNTNPLFDEIVEQMTKKIGIYSPRDNVMWRMGGFLTN----------- 107 Query: 117 RDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 F+ K+ R R+K K I+ PD + V+DT R+ I E Sbjct: 108 ------------SFSPKKF----RSRNK-KVCFGPIQP----PDCVVVLDTERKSSVILE 146 Query: 177 ARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 A RL++PIVA+VD+ + + Y +P N DS + + LFC+++ + + + Sbjct: 147 ADRLQVPIVALVDSTMPWEYFKKIAYPVPAN-DSVQFVYLFCNMITKTFLLEQKKLRALK 205 Query: 234 GADTKSAGETVVHSK----EGMQLEE-DSQSSESSVLDGQEVAVVP 274 G D K E V K EG Q+E+ S+S SS +D E+ +VP Sbjct: 206 G-DVKE--ELAVSKKESREEGQQIEQTKSESKISSAMD--ELLLVP 246 >gi|16603888|gb|AAL27192.1| ribosomal protein subunit 2 [Sarcodes sanguinea] gi|16603890|gb|AAL27193.1| ribosomal protein subunit 2 [Sarcodes sanguinea] Length = 118 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 3/118 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ ++G + L V TK + +D V+ AA ++ + VN KW+GGM+TNW Sbjct: 1 FLSEACDLVFAAASQGKQFLIVGTKKRVADLVVRAAIKARCHYVNKKWIGGMLTNWSITE 60 Query: 111 QSIQKLRD--LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 + + K RD +E+ + + + K++ ++ K + L GI+ M GLPD++ ++D Sbjct: 61 KRLHKFRDVRMEQKMGRL-KSIPKRDVAKLKIKLYHFQTYLGGIQYMMGLPDIVIILD 117 >gi|239610917|gb|EEQ87904.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis ER-3] Length = 312 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 46/93 (49%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 155 ITLELLLASQTHLGHATSLWNPANAEYIFGIRQGVHIISLDVTAAYLRRAAKVVREVARH 214 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKW 98 GG ILFV T+ V+ AA+R+ V +W Sbjct: 215 GGLILFVGTRKGQRRIVVSAAERAKGCHVFQRW 247 >gi|11467059|ref|NP_042535.1| ribosomal protein S2 [Acanthamoeba castellanii] gi|1173298|sp|P46753|RT02_ACACA RecName: Full=Ribosomal protein S2, mitochondrial gi|562040|gb|AAD11828.1| ribosomal protein S2 [Acanthamoeba castellanii] Length = 312 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 45/219 (20%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ QL+ S + G+ WNP+ ++ + NT+I +L+ T + +K + +S+ Sbjct: 8 TVNQLVASDLFLGYHIANWNPRTNFFLIGKYKNTNIFNLNYTYFLAKKFIVFLSELFVNK 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQY----CVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + V + E + + + +NSKW GM++N+K VS Sbjct: 68 GHLWLVNENFSLFNRSSELYQLYSLFPEITFLNSKWCKGMLSNYKYVS------------ 115 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 I P +FV + I E+ + I Sbjct: 116 -----------------------------IVKPAKFPHSIFVPNIQNNHYVINESFIINI 146 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 P +A+VD+ NP V + IPGN S +S+ F ++A + Sbjct: 147 PSIAIVDSIDNPSNVFFPIPGNSKSLKSLFFFYMVIAKS 185 >gi|168188045|ref|ZP_02622680.1| 30S ribosomal protein S2 [Clostridium botulinum C str. Eklund] gi|169294137|gb|EDS76270.1| 30S ribosomal protein S2 [Clostridium botulinum C str. Eklund] Length = 62 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 29/58 (50%), Positives = 41/58 (70%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + VA Sbjct: 5 SMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSVVA 62 >gi|261888173|gb|ACY06028.1| ribosomal protein S2 [Volvox carteri f. nagariensis] Length = 974 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 55/195 (28%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER---------NNTH----------- 41 +L + ++RQ+L SG+ +G + N +M+ Y++ + NN++ Sbjct: 334 SLVRASLRQMLRSGMHYGEKAIKCNARMKSYVWIRKKGLDNKFTVNNSNFNASSVRSKLS 393 Query: 42 --------------------------IIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 II+L +T L KAL ++ +G LFV TK Sbjct: 394 TLLGQTKSSLQTKTRETRPLIKKGRNIINLLKTRRCLNKALAQLTKYAVKGKTFLFVGTK 453 Query: 76 SQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKE 134 AS V AA S + + VN++WLGGM+TNWKT+ +SI K+R + KE Q K Sbjct: 454 KAASGLVSRAALFSKKAFFVNTRWLGGMLTNWKTILKSISKIRPIL----KEKQIIIK-- 507 Query: 135 RLNIERKRDKLKRAL 149 +I KR +K L Sbjct: 508 --DILEKRQNIKTRL 520 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 10/98 (10%) Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD------LMFVVDTNREKLA 173 +E L+K+ TKK + ++K ++++ L GI +M + + + ++ E A Sbjct: 843 DEKLSKQ----TKKVAASRKKKWQRIEKYLGGISNMTKIQEKQIRNNVAIIIGQQEEMNA 898 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 ++E ++L I + +VDTN NP D+ IP NDD+ SI Sbjct: 899 VRECQKLGIKMFHIVDTNCNPGFADHFIPANDDARNSI 936 >gi|224123978|ref|XP_002319211.1| predicted protein [Populus trichocarpa] gi|222857587|gb|EEE95134.1| predicted protein [Populus trichocarpa] Length = 229 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 42/226 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M L I++LL + G R + K+ Y + RN IID +T+ L+ A IS Sbjct: 1 MTLHSIIIQKLLTTNAHIGRRVAAHHLKI--YTYGMRNQISIIDSDKTLICLRNAASFIS 58 Query: 61 DTVA-RGGRILFVATKSQASDCVMEAAKRSAQYCV--NSKW-LGGMMTNWKTVSQSIQKL 116 + R +FV T + V + K+ Y N W +GG +TN S S +K Sbjct: 59 HLARDKNARFMFVNTNLLFDEIVEQMTKKMGIYSPRDNIMWRMGGFLTN----SHSPKKF 114 Query: 117 RDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 R R+K K I+ PD + V+DT R+ I E Sbjct: 115 RS-----------------------RNK-KVCFGPIQP----PDCVVVLDTERKSSVILE 146 Query: 177 ARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVA 219 A RL++PIVA+VD+N ++ + Y +P N DS + + LFC+++ Sbjct: 147 ADRLQVPIVALVDSNMPWEIYKKIAYPVPAN-DSVQFVYLFCNIIT 191 >gi|619569|emb|CAA58577.1| ribosomal protein S2 [Thermus thermophilus] Length = 89 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 6/94 (6%) Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +E +A++EAR+L IP++A+ DT+S+PDLVDY+IPGNDD+ RSI L+ S A+D I + Sbjct: 2 KEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSI----QLILSRAVDLIIQ 57 Query: 229 QHSYMGADTKSAGETVVHSKEGMQLEEDSQSSES 262 G S +V E + E E+ Sbjct: 58 ARG--GVVEPSPSYALVQEAEATETPEGESEVEA 89 >gi|16603922|gb|AAL27207.1| ribosomal protein subunit 2 [Monotropastrum humile] Length = 120 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 3/119 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ + ++ + L + T +D V+ AK++ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLVFEAASKEKQFLIIGTNKYIADLVLRYAKKARCHYVNKKWLGGILTNWLTTE 60 Query: 111 QSIQKLRDL--EELLNKENQGFT-KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 I KLRDL E+ +++ Q K+ + + ++ L+ GI+ M LPD++ ++D Sbjct: 61 TRINKLRDLEIEQKMDELKQIIIPKRNDIRLRKQLIHLQAYFGGIKYMTRLPDIVIILD 119 >gi|156619313|gb|ABU88336.1| ribosomal protein S2 [Chlamydomonas moewusii] Length = 931 Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 37/149 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNT--------------------------- 40 IRQ++++G+ G + N +M+ YI+ ++ Sbjct: 262 IRQMIQNGMHLGEKAVKCNARMKNYIWFKKQGVVDGRSPEALALLARSASTTVDVASSLT 321 Query: 41 ---------HIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 HII+L +T L KAL ++ +G LF+ TK A+ + A+ S Sbjct: 322 KVPLIKKGNHIINLLKTRRCLNKALTQLTKYALKGSTFLFIGTKKAAAGLIARASLFSKN 381 Query: 92 -YCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + VN++WLGG++TNWKT+ +SI K+R + Sbjct: 382 SFFVNTRWLGGLLTNWKTIRRSISKIRPI 410 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGL------PDLMFVVDTNREKLAIQEARRLRIP 183 ++KK ++K + ++ GI M + ++ +V E AI+E +++ I Sbjct: 781 YSKKIASARKKKWQRFEKYFGGIAKMTEMTKSQISKNVAIIVGQKEEINAIRECKKVGIK 840 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 + +VDTN NP L D++IP NDDS SI Sbjct: 841 MFNIVDTNCNPTLADHIIPANDDSRNSI 868 >gi|124802649|ref|XP_001347548.1| 40S ribosomal protein S2B, putative [Plasmodium falciparum 3D7] gi|74930131|sp|Q8IJD4|RSSA_PLAF7 RecName: Full=40S ribosomal protein SA gi|23495130|gb|AAN35461.1| 40S ribosomal protein S2B, putative [Plasmodium falciparum 3D7] Length = 263 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I ++L V G +N KM+RY++ ++ HII+L++T LQ A ++I ++ Sbjct: 13 SIAKMLICKVHIGTKNL--ENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIV-AISN 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ A+ + + +W GM+TN Q IQK Sbjct: 70 PADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQK---------- 114 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 FT+ P L+ V D + +++E+ IP++ Sbjct: 115 ----FTE--------------------------PRLLIVTDPRTDAQSVKESAYANIPVI 144 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ D++S + VD IP N+ SIAL L+A Sbjct: 145 ALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLA 178 >gi|68069781|ref|XP_676802.1| 40S ribosomal protein [Plasmodium berghei strain ANKA] gi|74993380|sp|Q4Z694|RSSA_PLABA RecName: Full=40S ribosomal protein SA gi|56496659|emb|CAH94104.1| 40S ribosomal protein, putative [Plasmodium berghei] Length = 263 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I ++L V G +N KM+RY++ ++ HII+L++T LQ A +VI V+ Sbjct: 13 SIAKMLICKVHIGTKNL--ENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIV-AVSN 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ A+ + + +W GM+TN Q IQK Sbjct: 70 PADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKF--------- 115 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 IE P L+ V D + +++E+ IP++ Sbjct: 116 ------------IE-------------------PRLLIVTDPRTDAQSVKESAYANIPVI 144 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ D++S + VD IP N+ SIAL L+A Sbjct: 145 ALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLA 178 >gi|70948671|ref|XP_743816.1| 40S ribosomal protein [Plasmodium chabaudi chabaudi] gi|74978944|sp|Q4XZN2|RSSA_PLACH RecName: Full=40S ribosomal protein SA gi|56523498|emb|CAH77628.1| 40S ribosomal protein, putative [Plasmodium chabaudi chabaudi] Length = 263 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I ++L V G +N KM+RY++ ++ HII+L++T LQ A +VI V+ Sbjct: 13 SIAKMLICKVHIGTKNL--ENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIV-AVSN 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ A+ + + +W GM+TN Q IQK Sbjct: 70 PADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKF--------- 115 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 IE P L+ V D + +++E+ IP++ Sbjct: 116 ------------IE-------------------PRLLIVTDPRTDAQSVKESAYANIPVI 144 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ D++S + VD IP N+ SIAL L+A Sbjct: 145 ALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLA 178 >gi|82704653|ref|XP_726642.1| ribosomal protein S2 [Plasmodium yoelii yoelii str. 17XNL] gi|74922158|sp|Q7RBT0|RSSA_PLAYO RecName: Full=40S ribosomal protein SA gi|23482139|gb|EAA18207.1| ribosomal protein S2, putative [Plasmodium yoelii yoelii] Length = 263 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I ++L V G +N KM+RY++ ++ HII+L++T LQ A +VI V+ Sbjct: 13 SIAKMLICKVHIGTKNL--ENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIV-AVSN 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ A+ + + +W GM+TN Q IQK Sbjct: 70 PADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKF--------- 115 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 IE P L+ V D + +++E+ IP++ Sbjct: 116 ------------IE-------------------PRLLIVTDPRTDAQSVKESAYANIPVI 144 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ D++S + VD IP N+ SIAL L+A Sbjct: 145 ALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLA 178 >gi|297833032|ref|XP_002884398.1| hypothetical protein ARALYDRAFT_477605 [Arabidopsis lyrata subsp. lyrata] gi|297330238|gb|EFH60657.1| hypothetical protein ARALYDRAFT_477605 [Arabidopsis lyrata subsp. lyrata] Length = 219 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 46/233 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL +G G R ++Y + RN IID +T+ L+ A ++ Sbjct: 1 MTIHAAVIQKLLNTGAHLGRR--AAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQ---YCVNSK---W-LGGMMTNWKTVSQSI 113 + G I FV T + D ++E R Q Y N W +GG +TN S S Sbjct: 59 NLAHMRGNIFFVNT-NPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTN----SYSP 113 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 +K R + K+ G M PD + V DT R+ Sbjct: 114 KKFRS-------------------------RHKKLCFGPTTM---PDCVVVFDTERKSSV 145 Query: 174 IQEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAI 223 I EA +L+IP+VA+VD N + + Y +P DS + + LFC+++ + Sbjct: 146 ILEASKLQIPVVAIVDPNVPLEFFEKITYPVPAR-DSVKFVYLFCNVITKCFV 197 >gi|16603918|gb|AAL27205.1| ribosomal protein subunit 2 [Monotropa uniflora] gi|16603920|gb|AAL27206.1| ribosomal protein subunit 2 [Monotropa uniflora] Length = 121 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 11/123 (8%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ +R + L + T +D V+ +A ++ + VN KWLGG++TNW T Sbjct: 1 FLSEACNLVFAAASREKQFLIIGTNKDIADLVLRSALKARCHYVNKKWLGGILTNWVTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL-------DGIRDMGGLPDLMF 163 + + KLRDL+ E +G K L +R+ KL++ L GI M LPD++ Sbjct: 61 KQLNKLRDLKI----EQKGVKLKSLLIPKRQSTKLRKQLVHLQTYFGGIIYMTRLPDIVI 116 Query: 164 VVD 166 ++D Sbjct: 117 ILD 119 >gi|296040608|gb|ADG85272.1| ribosomal protein S2 [Silene noctiflora] Length = 90 Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 53/90 (58%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV GH WNP+M YI + HII+L++T L +A ++ D + + LF Sbjct: 1 MEAGVHLGHGIRKWNPRMLPYISAKFKGRHIINLTRTARFLSEACDLVFDAASTDKQFLF 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK +A+ V AA+R+ + VN KWLGG Sbjct: 61 VGTKKKAAYLVARAARRARCHYVNKKWLGG 90 >gi|16603916|gb|AAL27204.1| ribosomal protein subunit 2 [Monotropa uniflora] Length = 121 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 11/123 (8%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ +R + L + T +D V+ +A ++ + VN KWLGG++TNW T Sbjct: 1 FLSEACNLVFAAASREKQFLIIGTNKDIADLVLRSALKARCHYVNKKWLGGILTNWVTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL-------DGIRDMGGLPDLMF 163 + + KLRDL+ E +G K L +R+ KL++ L GI M LPD++ Sbjct: 61 KQLNKLRDLKI----EQKGVKLKSLLIQKRQSTKLRKQLVHLQTYFGGIIYMTRLPDIVI 116 Query: 164 VVD 166 ++D Sbjct: 117 ILD 119 >gi|21536611|gb|AAM60943.1| putative ribosomal protein S2 [Arabidopsis thaliana] Length = 219 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 46/233 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL +G G R ++Y + RN IID +T+ L+ A ++ Sbjct: 1 MTIHAAVIQKLLNTGAHLGRR--AAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQ-------YCVNSKWLGGMMTNWKTVSQSI 113 + G I FV T + D ++E R Q +N +GG +TN S S Sbjct: 59 NLAHMRGNIFFVNT-NPLFDEIIELTSRRIQGDSYNHNRAINLWKMGGFLTN----SYSP 113 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 +K R + K+ G M PD + V D+ R+ Sbjct: 114 KKFRS-------------------------RHKKLCFGPTTM---PDCVVVFDSERKSSV 145 Query: 174 IQEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAI 223 I EA +L+IP+VA+VD N + + Y +P DS + + LFC+++ + Sbjct: 146 ILEASKLQIPVVAIVDPNVPLEFFEKITYPVPAR-DSVKFVYLFCNVITKCFV 197 >gi|56808418|ref|ZP_00366167.1| COG0052: Ribosomal protein S2 [Streptococcus pyogenes M49 591] Length = 128 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 84/124 (67%), Gaps = 3/124 (2%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L IP+VA+VD Sbjct: 2 LPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVAMVD 61 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG--ADTKSAG-ETVVH 246 TN++PD +D +IP NDD+ R++ L +A A I+G + + + ADT++ E +V Sbjct: 62 TNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEGRQGEDADIAFEADTQADSIEEIVE 121 Query: 247 SKEG 250 EG Sbjct: 122 VVEG 125 >gi|15228593|ref|NP_187010.1| RPS2 (RIBOSOMAL PROTEIN S2); structural constituent of ribosome [Arabidopsis thaliana] gi|27805714|sp|Q9GCB9|RT02_ARATH RecName: Full=Ribosomal protein S2, mitochondrial gi|6091762|gb|AAF03472.1|AC009327_11 putative ribosomal protein S2 [Arabidopsis thaliana] gi|9944887|gb|AAG03026.1|AF273102_1 ribosomal protein S2 [Arabidopsis thaliana] gi|27764986|gb|AAO23614.1| At3g03600 [Arabidopsis thaliana] gi|110742903|dbj|BAE99348.1| putative ribosomal protein S2 [Arabidopsis thaliana] gi|332640440|gb|AEE73961.1| ribosomal protein S2 [Arabidopsis thaliana] Length = 219 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 46/233 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL +G G R ++Y + RN IID +T+ L+ A ++ Sbjct: 1 MTIHAAVIQKLLNTGAHLGRR--AAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQ---YCVN---SKW-LGGMMTNWKTVSQSI 113 + G I FV T + D ++E R Q Y N + W +GG +TN S S Sbjct: 59 NLAHMRGNIFFVNT-NPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTN----SYSP 113 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 +K R + K+ G M PD + V D+ R+ Sbjct: 114 KKFRS-------------------------RHKKLCFGPTTM---PDCVVVFDSERKSSV 145 Query: 174 IQEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAI 223 I EA +L+IP+VA+VD N + + Y +P DS + + LFC+++ + Sbjct: 146 ILEASKLQIPVVAIVDPNVPLEFFEKITYPVPAR-DSVKFVYLFCNVITKCFV 197 >gi|110225707|ref|YP_665712.1| ribosomal protein S2 [Mesostigma viride] gi|17222578|gb|AAL36751.1|AF353999_31 ribosomal protein S2 [Mesostigma viride] Length = 182 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 16/143 (11%) Query: 46 SQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 S++ +++A ++ V +GG +LFV++ S S + E +KR Q V +W+GG++TN Sbjct: 21 SESFLRMRQACNIVYSIVKKGGSVLFVSSGSAPSKKIEEISKRCNQSFVTERWIGGILTN 80 Query: 106 WKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVV 165 +S++I +L+ TKKE LN + K G+RD P L+ + Sbjct: 81 SAQISKNIIRLKS------------TKKEDLNFFKSDFKSDLKYRGLRD--PCPSLIILF 126 Query: 166 DTNREKLAIQEARRLRIPIVAVV 188 E+ ++EA + IPI+A++ Sbjct: 127 GV--EEKPLREAYKKGIPIIALL 147 >gi|312372056|gb|EFR20103.1| hypothetical protein AND_20652 [Anopheles darlingi] Length = 418 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 57/123 (46%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ V GH+ N M+ Y++ R +IDL +T L+ AL + + R Sbjct: 210 FTVEDLFKARVHLGHKEGTLNDNMKGYLYGSRLGHCVIDLDKTAEHLRMALNIAAHIAFR 269 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + AK +Y W GG+ TN K ++ +L DL N Sbjct: 270 DGIILFFNRNALNAHQVEKTAKECGEYAHTRYWRGGVFTNAKVQFGAVTRLPDLCIFFNT 329 Query: 126 ENQ 128 N Sbjct: 330 MNN 332 >gi|156082017|ref|XP_001608501.1| 40S ribosomal protein [Plasmodium vivax SaI-1] gi|229891607|sp|A5KE24|RSSA_PLAVI RecName: Full=40S ribosomal protein SA gi|148801072|gb|EDL42477.1| 40S ribosomal protein, putative [Plasmodium vivax] Length = 263 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I ++L V G +N KM+RY++ ++ HI++L++T LQ A ++I + Sbjct: 13 SIAKMLICKVHIGTKNL--ENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIV-AINN 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ A+ + + +W GM+TN Q IQK Sbjct: 70 PADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQK---------- 114 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 FT+ P L+ V D + ++E+ IP++ Sbjct: 115 ----FTE--------------------------PRLLIVTDPRTDAQPVKESAYANIPVI 144 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ D++S + VD IP N+ SIAL L+A Sbjct: 145 ALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLA 178 >gi|221054077|ref|XP_002261786.1| 40s ribosomal protein [Plasmodium knowlesi strain H] gi|229891606|sp|B3L230|RSSA_PLAKH RecName: Full=40S ribosomal protein SA gi|193808246|emb|CAQ38949.1| 40s ribosomal protein, putative [Plasmodium knowlesi strain H] Length = 264 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I ++L V G +N KM+RY++ ++ HI++L++T LQ A ++I + Sbjct: 14 SIAKMLICKVHIGTKNL--ENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIV-AINN 70 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ A+ + + +W GM+TN Q IQK Sbjct: 71 PADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQK---------- 115 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 FT+ P L+ V D + ++E+ IP++ Sbjct: 116 ----FTE--------------------------PRLLIVTDPRTDAQPVKESAYANIPVI 145 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ D++S + VD IP N+ SIAL L+A Sbjct: 146 ALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLA 179 >gi|92429566|gb|ABD93527.2| mitochondrial small ribosomal subunit protein [Capsicum annuum] Length = 174 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 41/203 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + G R + K+ Y RN IID +T+ L+ A I + V Sbjct: 2 IQKLLSTNAHLGRRVAAHHFKI--YSHGSRNAMTIIDSDKTLICLRNACSFIGELVRHKA 59 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNK 125 R +FV T + D + + K C N + W LGG +TN S S +K R + LN Sbjct: 60 RFIFVNTNTLFDDIIDQMTKTIG--CRNDTSWRLGGFLTN----SSSPRKFRGRNKKLN- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 L I+ PD + + DT R+ IQEA +L+IPIV Sbjct: 113 -----------------------LTAIQP----PDCVVIFDTARKSSVIQEAAKLQIPIV 145 Query: 186 AVVDTNSNPDL---VDYVIPGND 205 +VD++ D+ + Y IP ND Sbjct: 146 GLVDSSMPWDIYKKITYPIPAND 168 >gi|297685690|ref|XP_002820416.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Pongo abelii] Length = 239 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 158 LPDLMFVVDT----NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 LPDL+ + T +A+++A ++ IP V +VDTN NP L+ Y +PGNDDS ++ L Sbjct: 132 LPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLAVHL 191 Query: 214 FCDLVASA 221 +C L +A Sbjct: 192 YCRLFQTA 199 >gi|9944891|gb|AAG03028.1|AF273104_1 ribosomal protein S2 [Zea mays] Length = 416 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 51/235 (21%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 ++ YI C RN I+D +T+ L+ AL + + + R F+ TK+ +M AK Sbjct: 29 LKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRFFFLKTKNLFIYSIM--AKM 86 Query: 89 SAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLK 146 + C+N S+W +G TN S + NK G ++ Sbjct: 87 WS--CINDSQWKIGAFFTN------SYANPKKFRSRNNKIYFGLNRQ------------- 125 Query: 147 RALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL---VDYVIPG 203 PD + ++ +R+ I EA R +IPIV++VD+ L ++Y IP Sbjct: 126 ------------PDCVVILHPDRKSSVILEADRSQIPIVSLVDSTIPWKLDKRINYSIPA 173 Query: 204 NDDSSRSIALFCDLVASAAI---------DGIARQHSYMGADTKSAGETVVHSKE 249 ND R + LFC+L+ I + R H KSA ++HS+E Sbjct: 174 NDP-MRLVYLFCNLITKTVILERKRITAKNRTPRSH-LSSCTEKSAAGIIIHSRE 226 >gi|7525009|ref|NP_050107.1| ribosomal protein S2 [Dictyostelium discoideum] gi|74828572|sp|Q9XPI7|RT02_DICDI RecName: Full=Ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|4958912|dbj|BAA78089.1| ribosomal protein S2 [Dictyostelium discoideum] Length = 244 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 17/229 (7%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I + ++ G + WNP ++ +I+ E + HII + + ++ K L +I + + G Sbjct: 19 INYVYKTEFHLGESAWKWNPTLKSFIYKEISQIHIIRIPAFLLIIGKVLNLIREVMRFRG 78 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +++ VA + K Q + +K+ G +T +K +L + L + + Sbjct: 79 KVVIVANNLANGKVIERLVKTMRQPALLTKYYAGGLT---------RKTENLRQYL-EAD 128 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G T + R K + L G++D+ P + ++D + K I E+ L IP + Sbjct: 129 KGLTN------LKVRSKYIKQLIGLQDLERKPAYIVILDAIQGKFLINESAILGIPTIGC 182 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 DT N ++Y + GN S L+ A +G+ RQ + + A+ Sbjct: 183 GDTTINFPKLNYPLIGNFKSREKRGSVLLLIKHAMFEGM-RQEATIFAE 230 >gi|4584128|emb|CAB40591.1| ribosomal protein S2 [Bacillus cereus ATCC 10987] Length = 67 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 42/57 (73%) Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +E++A+ EAR+L IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 2 KERIAVAEARKLHIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEA 58 >gi|294940508|ref|XP_002782805.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] gi|239894810|gb|EER14601.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] Length = 274 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+++L G RN + +M+RY+F ++ +II+L +T L A +V+ T+ Sbjct: 21 IQKMLVCSTHLGTRNL--DYRMKRYVFKRNKDGINIINLGKTWEKLMAAARVMV-TIENP 77 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ V+ + S V++ A V +W G +TN T Sbjct: 78 KDIMVVSQRPYGSRAVLKLANFIGATAVAGRWTPGSLTNQITPK---------------- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 FT+ P L+ V D + AI+EA IP++A Sbjct: 122 ---FTE--------------------------PRLLIVTDPRTDSQAIKEAAYANIPVIA 152 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S D VD IP N+ SIAL L+A Sbjct: 153 LCDTDSPLDFVDIAIPCNNKGKESIALLYYLLA 185 >gi|294882863|ref|XP_002769858.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] gi|239873671|gb|EER02576.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] Length = 282 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+++L G RN + +M+RY+F ++ +II+L +T L A +V+ T+ Sbjct: 20 IQKMLVCSTHLGTRNL--DYRMKRYVFKRNKDGINIINLGKTWEKLMAAARVMV-TIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ V+ + S V++ A V +W G +TN Q K Sbjct: 77 KDIMVVSQRPYGSRAVLKLANFIGATAVAGRWTPGSLTN-----QITPK----------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 FT+ P L+ V D + AI+EA IP++A Sbjct: 121 ---FTE--------------------------PRLLIVTDPRTDSQAIKEAAYANIPVIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S D VD IP N+ SIAL L+A Sbjct: 152 LCDTDSPLDFVDIAIPCNNKGKESIALLYYLLA 184 >gi|255640490|gb|ACU20531.1| unknown [Glycine max] Length = 80 Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 41/70 (58%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+GV FGH WNPKM YI +R HII+L +T L +A ++ D + G Sbjct: 10 LEEMMEAGVHFGHGTRKWNPKMSPYISAKRKGIHIINLIRTARFLSEACDLVFDAASEGK 69 Query: 68 RILFVATKSQ 77 + L V TK + Sbjct: 70 QFLIVGTKKK 79 >gi|113170510|ref|YP_717301.1| Rps2 [Ostreococcus tauri] gi|112806917|emb|CAL36423.1| unnamed protein product [Ostreococcus tauri] Length = 208 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 5/151 (3%) Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 ILF+ + S + A Q N W+ G++TNW I + E+ Sbjct: 61 ILFINNNPKLSFLTKQTAVSLDQPYSNEYWIPGLLTNWTGSQSMIHSFKYSEQYFG---- 116 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 F K+++ + K K K+ L+G+ P + ++ T I+EA+ L IPIVA Sbjct: 117 SFLDKKKV-VFPKYVKQKKKLEGLTAFKHRPSALVLLQTTGNASIIREAQLLNIPIVAFT 175 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + V+Y IP + D+ + FC ++ Sbjct: 176 NCTKTVSNVEYPIPFDTDAVAIVYFFCSILC 206 >gi|154412101|ref|XP_001579084.1| ribosomal protein [Trichomonas vaginalis G3] gi|121913287|gb|EAY18098.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 256 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 49/207 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G N + M+ Y+F C ++ TH+I+L+ T ++ A ++I V Sbjct: 13 IKMMLAAKVYLGSTNLSFG--MKPYVFTCRKDGTHVINLAMTYEKIKLAARMIY-AVEEP 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +L ++TKS + V + A+ V ++ G+ TN+ SI+ + Sbjct: 70 KDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNY-----SIKNFCE-------- 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P LM V D N + A+ EA IP +A Sbjct: 117 --------------------------------PRLMIVCDPNTDSQAVHEAAYANIPCIA 144 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIAL 213 + DT+++ D VD VIP N + S+ L Sbjct: 145 LCDTDAHLDYVDCVIPCNTKNKNSMGL 171 >gi|123427072|ref|XP_001307173.1| ribosomal protein [Trichomonas vaginalis G3] gi|121888787|gb|EAX94243.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 256 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 49/207 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G N + M+ Y+F C ++ TH+I+L+ T ++ A ++I V Sbjct: 13 IKMMLAAKVYLGSTNLSFG--MKPYVFTCRKDGTHVINLAMTYEKIKLAARMIY-AVEEP 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +L ++TKS + V + A+ V ++ G+ TN+ SI+ + Sbjct: 70 KDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNY-----SIKNFCE-------- 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P LM V D N + A+ EA IP +A Sbjct: 117 --------------------------------PRLMIVCDPNTDSQAVHEAAYANIPCIA 144 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIAL 213 + DT+++ D VD VIP N + S+ L Sbjct: 145 LCDTDAHLDYVDCVIPCNTKNKNSMGL 171 >gi|92429560|gb|ABD93524.2| mitochondrial small ribosomal subunit protein [Solanum melongena] Length = 174 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 41/203 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + Q G R + K+ Y RN IID +T+ L+ A I + V + Sbjct: 1 IQKLLSTNAQLGRRVAAHHFKI--YSVGSRNAMTIIDSDKTLICLRNACSFIGELVRQRA 58 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNK 125 R +FV T + + + K C N + W LGG +TN S S +K R + LN Sbjct: 59 RFIFVNTNFLFDEIIDQMTKTIG--CRNDTSWRLGGFLTN----SSSPRKFRGRNKKLN- 111 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 L ++ PD + + DT+R+ IQEA +L+IPIV Sbjct: 112 -----------------------LTAVQP----PDCVVIFDTDRKSSVIQEASKLQIPIV 144 Query: 186 AVVDTNSNPDL---VDYVIPGND 205 +VD+N D+ + Y +P D Sbjct: 145 GLVDSNMPWDIYKKITYPVPAKD 167 >gi|123457462|ref|XP_001316458.1| ribosomal protein [Trichomonas vaginalis G3] gi|123475378|ref|XP_001320867.1| ribosomal protein [Trichomonas vaginalis G3] gi|121899165|gb|EAY04235.1| ribosomal protein, putative [Trichomonas vaginalis G3] gi|121903681|gb|EAY08644.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 256 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 49/207 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G N + M+ Y+F C ++ TH+I+L+ T ++ A ++I V Sbjct: 13 IKMMLAAKVYLGSTNLSFG--MKPYVFTCRKDGTHVINLAMTYEKIKLAARMIY-AVEEP 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +L ++TKS + V + A+ V ++ G+ TN+ SI+ + Sbjct: 70 KDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNY-----SIKNFCE-------- 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P LM V D N + A+ EA IP +A Sbjct: 117 --------------------------------PRLMIVCDPNTDSQAVHEAAYANIPCIA 144 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIAL 213 + DT+++ D VD VIP N + S+ L Sbjct: 145 LCDTDAHLDYVDCVIPCNTKNKNSMGL 171 >gi|123439029|ref|XP_001310290.1| ribosomal protein [Trichomonas vaginalis G3] gi|121892054|gb|EAX97360.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 255 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 49/207 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G N + M+ Y+F C ++ TH+I+L+ T ++ A ++I V Sbjct: 12 IKMMLAAKVYLGSTNLSFG--MKPYVFTCRKDGTHVINLAMTYEKIKLAARMIF-AVEEP 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +L ++TKS + V + A+ V ++ G+ TN+ SI+ + Sbjct: 69 KDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNY-----SIKNFCE-------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P LM V D N + A+ EA IP +A Sbjct: 116 --------------------------------PRLMIVCDPNTDSQAVHEAAYANIPCIA 143 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIAL 213 + DT+++ D VD VIP N + S+ L Sbjct: 144 LCDTDAHLDYVDCVIPCNTKNKNSMGL 170 >gi|156089135|ref|XP_001611974.1| 40S ribosomal protein S2 [Babesia bovis T2Bo] gi|154799228|gb|EDO08406.1| 40S ribosomal protein S2, putative [Babesia bovis] Length = 273 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +IR +L V G +N KM+ Y+F + H+IDLS T+ ++ A + I V Sbjct: 16 SIRMMLTCKVHIGTKNV--ENKMKNYVFTRTQEGVHLIDLSWTLKKIKLAARAIV-AVTN 72 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S +++ + + W+ G +TN Q QK Sbjct: 73 PAEVVVVSARPYGSRAILKFSHYVGSQPIAGSWVPGTLTN-----QITQKF--------- 118 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 IE P LM D + A++E+ + +P++ Sbjct: 119 ------------IE-------------------PRLMIATDPRTDAQALKESSYVNVPVI 147 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ DT+S VD IP N+ +SIAL L+A Sbjct: 148 ALCDTDSPLQFVDIAIPCNNKGKKSIALMYWLLA 181 >gi|294663005|ref|YP_003579826.1| ribosomal protein S2 [Dictyostelium citrinum] gi|187479910|gb|ACD12711.1| ribosomal protein S2 [Dictyostelium citrinum] Length = 269 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/221 (21%), Positives = 101/221 (45%), Gaps = 16/221 (7%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 + ++ G + WNP ++ +I+ E N H+I + + ++ +AL++I++ + G++L Sbjct: 21 IYKTEFHIGEYAWRWNPMLKSFIYKETNRIHLIRIPAFLTVISQALKLITEVMRLRGKVL 80 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA + K+S Q + +++ G +T K + +R E+ +G Sbjct: 81 IVANSLVNGRVIDTLLKKSRQPAIRTRYYAGGVTRRK------ENIRQYLEI----QKGL 130 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 T N++ K L + L G++ + P + ++D + + + E + L I + DT Sbjct: 131 T-----NVKVKSKYLSQ-LVGVKGLIRKPAYILILDAVQGQYLLNECQVLGIQTIGCGDT 184 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 N + Y + GN S + L+ A +G+ ++ S Sbjct: 185 TLNLPKITYPLIGNFKSREKRSALLLLMYHAMFEGMRQETS 225 >gi|313231056|emb|CBY19054.1| unnamed protein product [Oikopleura dioica] Length = 261 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 + ++ + GH + NP ME YI RN T IIDL Q+ L AL I RGG IL Sbjct: 53 MYKARMHLGHSVIMRNPFMEPYILGCRNGTDIIDLDQSRAQLLIALNFIGHVALRGGTIL 112 Query: 71 FVA-TKSQASDCVMEAAKRSAQYC 93 F+ ++ +S ++AAK + +YC Sbjct: 113 FMPNSEGSSSRAALKAAKEAGEYC 136 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 23/30 (76%) Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 IPI+ +VDT+ NP ++ Y IP ND+S+ S+ Sbjct: 183 IPIIGIVDTDINPSMISYPIPCNDESTLSV 212 >gi|84997323|ref|XP_953383.1| ribosomal protein S2 [Theileria annulata strain Ankara] gi|74950469|sp|Q4U8U5|RSSA_THEAN RecName: Full=40S ribosomal protein SA gi|65304379|emb|CAI76758.1| ribosomal protein S2, putative [Theileria annulata] Length = 274 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +IR +L + V G +N KM +Y++ + H+I+L+ T+ L+ A + I TV+ Sbjct: 14 SIRMMLTAKVHIGTKNV--ENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIV-TVSN 70 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ + + + +W+ G +TN Q QK Sbjct: 71 PEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTN-----QITQKF--------- 116 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 IE P L+ D + +++E+ + +P++ Sbjct: 117 ------------IE-------------------PRLLVATDPRTDAQSLKESSYVSLPVI 145 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ DT+S + VD IP N+ SIAL L+A Sbjct: 146 ALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLA 179 >gi|225418688|ref|ZP_03761877.1| hypothetical protein CLOSTASPAR_05912 [Clostridium asparagiforme DSM 15981] gi|225041791|gb|EEG52037.1| hypothetical protein CLOSTASPAR_05912 [Clostridium asparagiforme DSM 15981] Length = 125 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/43 (55%), Positives = 33/43 (76%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTV 49 +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V Sbjct: 77 SMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSV 119 >gi|71029482|ref|XP_764384.1| 40S ribosomal protein SA [Theileria parva strain Muguga] gi|122082553|sp|Q4N1J1|RSSA_THEPA RecName: Full=40S ribosomal protein SA gi|68351338|gb|EAN32101.1| 40S ribosomal protein SA, putative [Theileria parva] Length = 274 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 49/214 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +IR +L + V G +N KM +Y++ + H+I+L+ T+ L+ A + I TV+ Sbjct: 14 SIRMMLTAKVHIGTKNV--ENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIV-TVSN 70 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ + + + +W+ G +TN Q QK Sbjct: 71 PEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTN-----QITQKF--------- 116 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 IE P L+ D + +++E+ + +P++ Sbjct: 117 ------------IE-------------------PRLLVATDPRTDAQSLRESSYVSLPVI 145 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ DT+S + VD IP N+ SIAL L+A Sbjct: 146 ALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLA 179 >gi|92429556|gb|ABD93522.2| mitochondrial small ribosomal subunit protein [Physalis sp. TA1367] Length = 171 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 41/202 (20%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + K+ Y RN IID T+ L+ A I + V R Sbjct: 1 QKLLSTNAHLGRRVAAHHFKI--YSAGSRNAMTIIDSDNTLICLRNACSFIGELVRHKAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV T + + + + K C N + W LGG +TN S S +K R + LN Sbjct: 59 FIFVNTNTLFDEIIDQMTKTIG--CKNDTSWRLGGFLTN----SSSPRKFRGRNKKLN-- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L ++ PD + + D+ R+ IQEA +L+IPIV Sbjct: 111 ----------------------LTAVQP----PDCVVIFDSERKSSVIQEASKLQIPIVG 144 Query: 187 VVDTNSNPDL---VDYVIPGND 205 +VD+++ D+ + Y +P ND Sbjct: 145 LVDSSTPWDIYKKITYPVPAND 166 >gi|84468334|dbj|BAE71250.1| putative UDP-glucose pyrophosphorylase [Trifolium pratense] Length = 628 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 43/230 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL + G + + + Y + RN IID +T+ ++ A IS Sbjct: 1 MTIHSVVIQKLLSTNAHIGRQ--VVTHHFKEYTYGLRNKMAIIDSDKTLICMRSAFNFIS 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWL---GGMMTNWKTVSQSIQKLR 117 + GR +F+ T + K+ Y +S L GG +TN S S +K R Sbjct: 59 CLARQNGRFMFINTNPLFDEIFDLMTKKVGCYSPSSSSLWRTGGFLTN----SNSPKKFR 114 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 ++ ++L + PD + +VDT + I EA Sbjct: 115 -------------SRNKKLCFGPTQP---------------PDCIVIVDTESKSSVIDEA 146 Query: 178 RRLRIPIVAVVDTNSNP----DLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +L+IPIVA+VD+ + P + Y IP N S + + LFC+L+ + Sbjct: 147 FKLQIPIVALVDS-AMPLHTFSRIAYPIPVN-PSVQFVYLFCNLITKTLL 194 >gi|92429568|gb|ABD93528.2| mitochondrial small ribosomal subunit protein [Solanum tuberosum] Length = 175 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 41/203 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + G R + K+ Y RN IID +T+ L+ A I + V + Sbjct: 2 IQKLLSTNAHLGRRVAAHHFKI--YSIGSRNGMTIIDSEKTLICLRNACSFIGELVRQRA 59 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNK 125 R +FV T + + + + + C N + W LGG +TN S S +K R + LN Sbjct: 60 RFIFVNTNTLFDEIIDQMTETIG--CRNDTSWRLGGFLTN----SSSPRKFRGRNKKLN- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 L I+ PD + + DT R+ IQEA +L+IPIV Sbjct: 113 -----------------------LTAIQP----PDCVVIFDTERKSSVIQEAAKLQIPIV 145 Query: 186 AVVDTNSNPDL---VDYVIPGND 205 +VD++ D+ + Y +P D Sbjct: 146 GLVDSSMPLDIYKKITYPVPAKD 168 >gi|209916096|gb|ACI95891.1| ribosomal protein S2 [Isoetes engelmannii] gi|217331583|gb|ACK38309.1| ribosomal protein S2 [Isoetes engelmannii] gi|241912115|gb|ACS71778.1| ribosomal protein S2 [Isoetes engelmannii] Length = 232 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 35/223 (15%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 R L + GHR I ++++ I+ + +T+ ++A I+ + G Sbjct: 12 RSLPSTHAYLGHR-----------IPIFKDSSEILQIEKTLICSRRARNPIAPIIRGEGH 60 Query: 69 ILFVATKSQA----SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 FV+ + A S V AKR+ Q ++ +W+GG+ NW + + DL++ Sbjct: 61 --FVSVNANANKVYSKIVQGTAKRTNQSYIDHEWIGGVSINW-------EHMIDLQK--- 108 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + T L+ R K+K L GI +P+ V++ N +AI EA + RI I Sbjct: 109 HGDDALTSSPFLDYLR---KMKNCLGGIM-THRIPNRSVVMNANPSSMAILEADQSRISI 164 Query: 185 VAVVDT---NSNPDLVDYVIPGND-DSSRSIALFCDLVASAAI 223 V +VD N +L+ Y IP ND DS + + LF + V I Sbjct: 165 VFLVDCHIPNGLHELITYPIPVNDYDSIQFVYLFRNSVTKTVI 207 >gi|92429570|gb|ABD93529.2| mitochondrial small ribosomal subunit protein [Coffea canephora] Length = 173 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 41/202 (20%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + K+ Y RN IID +T+ L+ A I + V GR Sbjct: 1 QKLLSTNAHLGRRVAAHHFKI--YSCGSRNAMTIIDSDKTLICLRNACNFIGNLVRLKGR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 LFV T + + + E K S LGG +TN S S +K R + LN Sbjct: 59 FLFVNTNTLFDEIIEEMTKAVGIKNDKSWRLGGFLTN----SSSPKKFRGRNKKLN---- 110 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGL--PDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G + PD + + DT R+ I EA RL++PIV Sbjct: 111 --------------------------LGAIHAPDCVVIFDTERKSSVILEAERLQVPIVG 144 Query: 187 VVDTN---SNPDLVDYVIPGND 205 +VD++ + Y +P ND Sbjct: 145 LVDSSMPWETYKKITYPVPAND 166 >gi|92429562|gb|ABD93525.2| mitochondrial small ribosomal subunit protein [Petunia axillaris subsp. parodii] Length = 172 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 41/202 (20%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + Q G R + K+ Y RN IID +T+ L+ A I + V R Sbjct: 1 QKLLSTNAQLGRRVAAHHFKI--YSCGSRNAMTIIDSDKTLICLRNACSFIGELVRNKAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV T + + + + K C N + W LGG +TN S S +K R + LN Sbjct: 59 FIFVNTNTLFDEIIDQMTKTIG--CRNDTSWRLGGFLTN----SSSPRKFRGRNKKLN-- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L ++ PD + + DT R+ IQEA +L++PIV Sbjct: 111 ----------------------LTAVQP----PDCVVIFDTERKSSVIQEAAKLQVPIVG 144 Query: 187 VVDTNSNPDL---VDYVIPGND 205 +VD++ ++ + Y +P ND Sbjct: 145 LVDSSMPWEIYKKITYPVPAND 166 >gi|19112932|ref|NP_596140.1| 40S ribosomal protein S0A (p40) [Schizosaccharomyces pombe 972h-] gi|15214296|sp|Q9Y7L8|RSSA1_SCHPO RecName: Full=40S ribosomal protein S0-A gi|4538669|emb|CAB39363.1| 40S ribosomal protein S0A (p40) [Schizosaccharomyces pombe] Length = 292 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N +M+ Y++ R++ HI++L +T L A +VI+ T+ Sbjct: 17 IKQLLAANCHIGSKNL--EVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARVIA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+T++ V++ A + + ++ G TN+ T R E Sbjct: 74 ADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT--------RTYRE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRADAQAIKEASFVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ +SI L L+A Sbjct: 149 LCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLA 181 >gi|108773057|ref|YP_635966.1| ribosomal protein S2 [Scenedesmus obliquus] gi|122231591|sp|Q1KVV8|RR2B_SCEOB RecName: Full=30S ribosomal protein S2, chloroplastic 2 gi|88696623|gb|ABD48249.1| ribosomal protein S2 fragment b [Scenedesmus obliquus] Length = 379 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 6/99 (6%) Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL------PDLMFVVDTNREKL 172 +E++ +++ + +KK ++K +L++ GI M + ++ ++ E Sbjct: 244 MEQIYDQKLKFTSKKIAATRKQKWQRLEKYFGGITKMAKMNTKQISKNVAIIIGQQEEMN 303 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 A+ E R+L + I AVVDTN NP VD++IP NDDS SI Sbjct: 304 AVHECRKLGMKIFAVVDTNCNPKFVDHIIPANDDSRNSI 342 >gi|320582940|gb|EFW97157.1| Mitochondrial ribosomal protein of the small subunit [Pichia angusta DL-1] Length = 292 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+++LL +G GH LW + YI+ N+ HIIDL QTV L++A +V+ V Sbjct: 153 QVTVQKLLAAGAHLGHFTKLWKHSTQPYIYGVYNDLHIIDLEQTVTHLRRAAKVVEGVVE 212 Query: 65 RGGRILFVATKSQASDC 81 GG + +DC Sbjct: 213 NGGTSRIPSVGIVDTDC 229 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/45 (53%), Positives = 30/45 (66%) Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 RIP V +VDT+ +P LV Y IP NDDS R+ L C ++A AA G Sbjct: 218 RIPSVGIVDTDCDPALVTYAIPANDDSIRATNLICGVLAKAAERG 262 >gi|92429564|gb|ABD93526.2| mitochondrial small ribosomal subunit protein [Nicotiana tomentosiformis] Length = 171 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 41/202 (20%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + K+ Y RN IID +T+ L+ A I + V R Sbjct: 1 QKLLSTNAHLGRRVAAHHFKI--YSCGSRNAMTIIDSDKTLICLRNACSFIGELVRNRAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV T + + + + K C N + W LGG +TN S S +K R + LN Sbjct: 59 FIFVNTNTLFDEIIDQMTKTIG--CRNDTSWRLGGFLTN----SSSPRKFRGRNKKLN-- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L ++ PD + + DT R+ IQEA +L+IPIV Sbjct: 111 ----------------------LAAVQP----PDCVVIFDTERKSSVIQEAAKLQIPIVG 144 Query: 187 VVDTNSNPDL---VDYVIPGND 205 +VD++ D+ + Y +P ND Sbjct: 145 LVDSSMPWDIYKKITYPVPAND 166 >gi|110589438|gb|ABG77228.1| 30S ribosomal subunit protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 110 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 3/68 (4%) Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTN++PD +DYVIPGNDD+ R++ LF ++A ++G + S AG Sbjct: 43 IPVVGVVDTNNDPDDIDYVIPGNDDAIRAVQLFVQGASAAVLEG---RASAAHVAASGAG 99 Query: 242 ETVVHSKE 249 + V K+ Sbjct: 100 DEFVEVKD 107 >gi|1171590|emb|CAA64575.1| rps2 [Plasmodium falciparum] Length = 227 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/221 (21%), Positives = 108/221 (48%), Gaps = 8/221 (3%) Query: 7 TIRQLLESGVQFG--HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T LL+S + G ++N ++ +YI+ + N I++ + L K I + Sbjct: 4 TFDNLLKSKIYIGNIYKNIYFDN--YKYIYKIKFNYCILNFTFIALYLYKLYLYIYNISL 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV-SQSIQKLRDLEELL 123 +ILF+ + + ++ + +N KW+ G++TNW + + I + + + Sbjct: 62 MNNKILFINNNNLIKNFTIKICNLTNNLYIN-KWVSGLLTNWFVLKKKIIIYIWISKIIK 120 Query: 124 NKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 NK N +KK N+ KL +GI++M LP +F+ + N+ L ++E +L++ Sbjct: 121 NKYFNNILSKKCIYNLNIIYIKLYNKFNGIKNMINLPKYIFLTNFNKN-LILKEILKLKL 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +++ ++ + + ++ I GN ++ +S+ L ++ ++ I Sbjct: 180 ILISFINLSLDSSNINIKILGNYNNYKSLKLIYKIIYTSLI 220 >gi|62719452|gb|AAX93326.1| 30S ribosomal protein S2 [Lactobacillus sanfranciscensis] Length = 64 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 25/47 (53%), Positives = 36/47 (76%) Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +L IP++A+VDTN++PD +DYVIP NDD+ R+I L +A A I+G Sbjct: 1 KLNIPVIAMVDTNTDPDGIDYVIPSNDDAIRAIRLITSTMADAVIEG 47 >gi|9944889|gb|AAG03027.1|AF273103_1 ribosomal protein S2 [Zea mays] Length = 531 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 38/191 (19%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 YI C RN I+D +T+ L+ AL + + + R F+ TK+ +M AK + Sbjct: 30 YIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRFFFLKTKNLFIYSIM--AKMWS- 86 Query: 92 YCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 C+N S+W +G TN S + NK G ++ Sbjct: 87 -CINDSQWKIGAFFTN------SYANPKKFRSRNNKIYFGLNRQ---------------- 123 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD-TNSNPDLVDYVIPGNDDSS 208 PD + ++ +R+ I EA R +IPIV +VD T + + IP ND Sbjct: 124 ---------PDCVVILHPDRKSSVILEADRSQIPIVYLVDSTIPSHKRFTFTIPANDSLR 174 Query: 209 RSIALFCDLVA 219 + LFC+L+ Sbjct: 175 LLVYLFCNLIT 185 >gi|219121660|ref|XP_002181180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407166|gb|EEC47103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 220 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L +GV G RN + M+ YI+ RN+ HI+++ +T L A +VI + Sbjct: 18 IQMMLSAGVHTGTRNS--DSNMQEYIWRRRNDGVHILNIGKTWEKLVLAARVIV-AIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A + V +W G TN Q + +E Sbjct: 75 EDVIAISARPYGMRAVLKFANYTGAQAVAGRWTPGTFTN--------QITKQFKE----- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + A++EA + IP++A Sbjct: 122 --------------------------------PRLLIITDPRTDSQAVKEASYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D++S VD IP N+ SI L L+A Sbjct: 150 FCDSDSPLQYVDVAIPANNKGKYSIGLLYWLLA 182 >gi|110816071|ref|YP_684403.1| ribosomal protein S2 [Oltmannsiellopsis viridis] gi|86450282|gb|ABC96361.1| ribosomal protein S2 [Oltmannsiellopsis viridis] Length = 296 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 9/104 (8%) Query: 28 KMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAK 87 K+E ++ RN +IIDL TV + A +VI T+ G IL + T S + V++ K Sbjct: 24 KVEPFVLGTRNRFNIIDLRATVKSMIIAAKVIKQTLEIGKHILIINTNSY-NIPVLKEFK 82 Query: 88 RSAQYC--------VNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 S Y VN KW GG +TNW +S+ + + + + + Sbjct: 83 ESLVYIEKVKYFSFVNEKWFGGTLTNWVGLSKKVTRFKRFTQFV 126 >gi|237838815|ref|XP_002368705.1| 40S ribosomal protein S0-A, putative [Toxoplasma gondii ME49] gi|74932395|sp|Q8MPF7|RSSA_TOXGO RecName: Full=40S ribosomal protein SA gi|22035888|emb|CAD43146.1| putative ribosomal protein S2 [Toxoplasma gondii] gi|211966369|gb|EEB01565.1| 40S ribosomal protein S0-A, putative [Toxoplasma gondii ME49] gi|221481462|gb|EEE19848.1| 40S ribosomal protein SA, putative [Toxoplasma gondii GT1] gi|221505428|gb|EEE31073.1| 40S ribosomal protein SA, putative [Toxoplasma gondii VEG] Length = 287 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVI 59 ++L + +I ++L G +N KM Y+F H+I+L++T + A +VI Sbjct: 9 LSLQEDSIAKMLICKAHIGTKNV--EHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVI 66 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + +L ++ + S V++ ++ + +W GM+TN Q QK + Sbjct: 67 V-AIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTN-----QITQKFME- 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + A++E+ Sbjct: 120 ---------------------------------------PRLLIVTDPRTDAQAVRESAY 140 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +P++A+ DT+S + VD IP N+ SIAL L+A Sbjct: 141 ANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLA 180 >gi|325118820|emb|CBZ54372.1| hypothetical protein NCLIV_048020 [Neospora caninum Liverpool] Length = 328 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVI 59 ++L + +I ++L G +N KM Y+F H+I+L++T + A +VI Sbjct: 9 LSLQEDSIAKMLICKAHIGTKNV--EHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVI 66 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + +L ++ + S V++ ++ + +W GM+TN Q QK + Sbjct: 67 V-AIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTN-----QITQKFME- 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + A++E+ Sbjct: 120 ---------------------------------------PRLLIVTDPRTDAQAVRESAY 140 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +P++A+ DT+S + VD IP N+ SIAL L+A Sbjct: 141 ANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLA 180 >gi|92429558|gb|ABD93523.2| mitochondrial small ribosomal subunit protein [Solanum lycopersicum] Length = 172 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 41/202 (20%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + + Y RN IID + + L+ A I + V + R Sbjct: 1 QKLLSTNAHLGRR--VAEHHFKIYSVGSRNGMTIIDSEKQLICLRNACSFIGELVRQRAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +FV T + + + + + C N + W LGG +TN S S +K R + LN Sbjct: 59 FIFVNTNTLFDEIIDQMTQTIG--CRNDTSWRLGGFLTN----SSSPRKFRGRNKKLN-- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L I+ PD + + DT+R+ IQEA +L+IPIV Sbjct: 111 ----------------------LTAIQP----PDCVVIFDTDRKSSVIQEAAKLQIPIVG 144 Query: 187 VVDTNSNPDL---VDYVIPGND 205 +VD++ D+ + Y +P D Sbjct: 145 LVDSSMPLDIYKKITYPVPAKD 166 >gi|2500393|sp|Q01661|RS0_PNECA RecName: Full=40S ribosomal protein S0; AltName: Full=Extracellular matrix receptor protein gi|493057|gb|AAA52187.1| extracellular matrix receptor protein [Pneumocystis carinii] Length = 295 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 50/220 (22%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 A P I L+ + G RN +ME Y+F R + HII+L + L A ++I Sbjct: 6 AQPAADIEMLISANCHIGSRNC--ELRMEPYVFKRRADGVHIINLGKRWEKLILAARIIV 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ I+ V+++S V + A + A+ ++S++ G TN+ T R Sbjct: 64 -TIENPTDIIAVSSRSYGQRAVHKYALHTGAREAISSRFTPGSFTNYIT--------RSY 114 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +E P L+ V D + AI+EA Sbjct: 115 KE-------------------------------------PRLIIVTDPRTDSQAIKEASY 137 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A+ DT+S VD IP N+ SI L ++A Sbjct: 138 VNIPVIALCDTDSPLQYVDVAIPTNNKGRHSIGLIWWMLA 177 >gi|213406445|ref|XP_002173994.1| 40S ribosomal protein S0A [Schizosaccharomyces japonicus yFS275] gi|269969620|sp|B6K180|RSSA1_SCHJY RecName: Full=40S ribosomal protein S0-A gi|212002041|gb|EEB07701.1| 40S ribosomal protein S0A [Schizosaccharomyces japonicus yFS275] Length = 290 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N + +ME Y++ R++ HII++ +T + A +VI+ T+ Sbjct: 17 IKQLLAASCHIGSKNL--DVRMENYVWKRRSDGVHIINIGKTWEKIVLAARVIA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+++ V++ A + + ++ G TN+ T R E Sbjct: 74 ADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT--------RTYRE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ D + AI+EA + IP+++ Sbjct: 121 --------------------------------PRLIIATDPRADAQAIKEASYVNIPVIS 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S VD IP N+ +SI L L+A Sbjct: 149 LCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLA 181 >gi|288932311|ref|YP_003436371.1| ribosomal protein S2 [Ferroglobus placidus DSM 10642] gi|288894559|gb|ADC66096.1| ribosomal protein S2 [Ferroglobus placidus DSM 10642] Length = 204 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 54/213 (25%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR--G 66 + L +GV G + + M+R+I+ R + +I+D+ ML + L++ +AR Sbjct: 20 EYLAAGVHIGTQ--IKTGDMKRFIYKVRQDGLYILDIR----MLDERLKLAGKLLARYEP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++L VA + VM AK + V +++ G +TN L++ +E Sbjct: 74 SKVLAVAARQYGQKPVMMFAKVTGAEYVVGRFIPGTLTN--------PALKEYKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P+++ V D +K A+ EA + IP+VA Sbjct: 121 --------------------------------PEIVIVTDPAIDKQAVIEASEVGIPVVA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DTN+N +D+VIP N+ +++AL ++A Sbjct: 149 LCDTNNNTANIDFVIPTNNKGRKALALVYWILA 181 >gi|119872611|ref|YP_930618.1| 30S ribosomal protein S2 [Pyrobaculum islandicum DSM 4184] gi|209573677|sp|A1RTJ3|RS2_PYRIL RecName: Full=30S ribosomal protein S2P gi|119674019|gb|ABL88275.1| SSU ribosomal protein S2P [Pyrobaculum islandicum DSM 4184] Length = 207 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 41/60 (68%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+FVVD + A+ EA ++ IPI+A+VDT++ +D++IP N+ RS+AL ++A Sbjct: 119 DLLFVVDPKLDAQAVAEAAKMGIPIIALVDTDTPHQYIDFMIPCNNKGRRSLALIFWILA 178 >gi|167950450|ref|ZP_02537524.1| 30S ribosomal protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 50 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/38 (57%), Positives = 30/38 (78%) Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +KL R++ GI+DMGGLPD MFV+D E +A+ EAR+L Sbjct: 2 EKLDRSIGGIKDMGGLPDAMFVIDVGNENIAVAEARKL 39 >gi|19115325|ref|NP_594413.1| 40S ribosomal protein S0B [Schizosaccharomyces pombe 972h-] gi|15214286|sp|Q9P546|RSSA2_SCHPO RecName: Full=40S ribosomal protein S0-B gi|7981403|emb|CAB92099.1| 40S ribosomal protein S0B [Schizosaccharomyces pombe] Length = 287 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N +ME Y++ R++ HII+L +T L A +VI+ T+ Sbjct: 18 IKNLLAADSHIGSKNL--EVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIA-TIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++++ V++ A + + ++ G TN+ T R E Sbjct: 75 ADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT--------RTYRE----- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 122 --------------------------------PRLIIVTDPRADAQAIKEASFVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ +SI L L+A Sbjct: 150 LCDTDSILNHVDVAIPINNKGYKSIGLAWYLLA 182 >gi|325179525|emb|CCA13922.1| 40S ribosomal protein SA putative [Albugo laibachii Nc14] Length = 279 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + G RN + +ME Y++ R + HII++++T +Q A +VI T+ Sbjct: 9 IKMMLAAQTHIGTRNA--DSRMEEYLWSRRIDGVHIINIAKTWEKIQLAARVIV-TIENP 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A+ + ++ G TN Q ++ R+ Sbjct: 66 ADVIAISARPYGQRAVLKFAQYIGCASIAGRFTPGTFTN-----QITKQFRE-------- 112 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + DT + A++E+ + +P++A Sbjct: 113 --------------------------------PRLLIITDTRTDSQAVRESASVNVPVIA 140 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D++S VD IP N+ SI L L+A Sbjct: 141 FCDSDSPLQYVDVAIPANNKGKASIGLLYWLLA 173 >gi|34305123|gb|AAQ63482.1| laminin-binding protein [Acanthamoeba healyi] Length = 256 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 50/215 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++L + V G N +PKMERY++ R + H+IDL +T L A +VI+ + Sbjct: 2 VQKMLAAEVHIGSNNL--DPKMERYVWRRRQDGVHLIDLGKTWDKLILAARVIAG-IEHP 58 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ ++ V + A + + ++ G TN IQ+ RD +E Sbjct: 59 SDICIISGRTYGQRAVHKFANFTGTTAIAGRFTPGTFTN------QIQQ-RDFKE----- 106 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + A+ EA + IP +A Sbjct: 107 --------------------------------PRLIVVADPRVDHQALTEASYVNIPTIA 134 Query: 187 VVDTNSNPDL--VDYVIPGNDDSSRSIALFCDLVA 219 N++ L VD IP N+ S +I L L+A Sbjct: 135 FAFANTDSPLRHVDIAIPCNNGSKHAIGLMFWLLA 169 >gi|213405249|ref|XP_002173396.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] gi|269969621|sp|B6K1S2|RSSA2_SCHJY RecName: Full=40S ribosomal protein S0-B gi|212001443|gb|EEB07103.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] Length = 283 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N + +ME Y++ R + +II++ +T + A +VI+ T+ Sbjct: 18 IKQLLAASCHIGSKNL--DVRMENYVWKRRADGVNIINIGKTWEKIVLAARVIA-TIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T R E Sbjct: 75 ADVCVISARPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT--------RTYRE----- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 122 --------------------------------PRLIVVTDPRADHQAIKEASYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S VD IP N+ +SI L L+A Sbjct: 150 LCDTDSPLAHVDIAIPTNNKGYKSIGLVWWLLA 182 >gi|167950449|ref|ZP_02537523.1| 30S ribosomal protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 66 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 3/66 (4%) Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +V VVDTN++PD +DYVIPGNDD+ R++ LF ++A ++G A S AG+ Sbjct: 1 MVGVVDTNNDPDDIDYVIPGNDDAIRAVQLFVQGASAAVLEGRA---SAAHVAASGAGDE 57 Query: 244 VVHSKE 249 V K+ Sbjct: 58 FVEVKD 63 >gi|156936983|ref|YP_001434779.1| 30S ribosomal protein S2 [Ignicoccus hospitalis KIN4/I] gi|209573656|sp|A8A8X0|RS2_IGNH4 RecName: Full=30S ribosomal protein S2P gi|156565967|gb|ABU81372.1| SSU ribosomal protein S2P [Ignicoccus hospitalis KIN4/I] Length = 212 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 38/56 (67%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 PD++ V DT ++ AI EA + IP+VA+ DT++ + VD +IPGN+ +S+AL Sbjct: 120 PDVILVTDTRMDQQAIVEAAEIGIPVVAICDTDNKTENVDLIIPGNNKGRKSLALL 175 >gi|301121570|ref|XP_002908512.1| 40S ribosomal protein SA [Phytophthora infestans T30-4] gi|262103543|gb|EEY61595.1| 40S ribosomal protein SA [Phytophthora infestans T30-4] Length = 283 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G RN + KM YI+ RN+ HII++ +T L A +VI V Sbjct: 9 IKMMLAAQVHIGTRNA--DSKMADYIWRRRNDGIHIINVGKTWEKLMLAARVIV-AVENP 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A+ + + S++ G TN Q ++ R+ Sbjct: 66 EDVIAISARPYGQRAVLKFAQHTGCQAIASRFTPGTFTN-----QITKQFRE-------- 112 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + A++E+ + +P++A Sbjct: 113 --------------------------------PRLLLITDPRTDSQAVRESSFVNVPVIA 140 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D++S VD IP N+ SI L L+A Sbjct: 141 FCDSDSPLQFVDVAIPANNKGKLSIGLLYWLLA 173 >gi|149039192|gb|EDL93412.1| mitochondrial ribosomal protein S2 (predicted), isoform CRA_a [Rattus norvegicus] Length = 170 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQAS--DCVMEAAKRSAQYCVNSK 97 G ILFV+ Q S D ++ S C+ K Sbjct: 136 KGIILFVSRNRQFSHLDEFIDMGSLSRDLCLKRK 169 >gi|170587222|ref|XP_001898377.1| 28S ribosomal protein S2, mitochondrial [Brugia malayi] gi|158594203|gb|EDP32789.1| 28S ribosomal protein S2, mitochondrial, putative [Brugia malayi] Length = 229 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 158 LPDLMFVVDTNREKL----AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 LPD + + T L A++EA ++ IP + +VD+N++P + Y IPGNDDS S+ Sbjct: 148 LPDTIIFLSTLTSVLETHPAVREAAKMVIPTIGIVDSNADPTNITYPIPGNDDSVSSVQY 207 Query: 214 FCDLVASAAIDG 225 F D A G Sbjct: 208 FMDCFVKAVKVG 219 >gi|255513541|gb|EET89807.1| ribosomal protein S2 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 207 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 40/61 (65%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+F+ D+ EK A++EA ++ IPI+A+ DT++ +D ++P N+ RS+A L+ Sbjct: 113 PKLIFISDSRNEKQAVKEASKIGIPIIALSDTDNITKFIDLIVPVNNRGRRSLAFVYYLL 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|320101533|ref|YP_004177125.1| 30S ribosomal protein S2P [Desulfurococcus mucosus DSM 2162] gi|319753885|gb|ADV65643.1| SSU ribosomal protein S2P [Desulfurococcus mucosus DSM 2162] Length = 219 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 36/56 (64%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 PD++ V DT + A++EA IPIVA DT++ D VD +IPGN+ +S+AL Sbjct: 132 PDVVVVTDTRSDAQALKEAAETGIPIVAFADTDNRVDYVDLIIPGNNKGRKSLALL 187 >gi|326518444|dbj|BAJ88251.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 281 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 49/209 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL S G +N N +ME YI+ +R++ +IID+ +T + A ++++ T+ + Sbjct: 20 LLSSQSHIGSKNV--NVQMEPYIYKKRSDGVNIIDIGKTYAKIVLAARILA-TIENPNDV 76 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 ++ + V++ A + + ++ G TN+ T R +E Sbjct: 77 CVISARPYGHRAVLKYAGFTGAQAIAGRFTPGSFTNYIT--------RSFKE-------- 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 121 -----------------------------PRLIIVTDPRVDHQAIREAAYVNIPVIALCD 151 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 T+++ VD IP N+ S SI L L+ Sbjct: 152 TDASLKFVDVAIPCNNKSRHSIGLIWYLL 180 >gi|213405829|ref|XP_002173686.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] gi|269969622|sp|B6K2L2|RSSA3_SCHJY RecName: Full=40S ribosomal protein S0-C gi|212001733|gb|EEB07393.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] Length = 289 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N +ME Y++ R + +II++ +T + A ++I+ TV Sbjct: 18 IKQLLAASCHIGSKNL--EIRMENYVWKRRADGVNIINIGKTWEKIVLAARIIA-TVENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+++ V++ A + + ++ G TN+ T R E Sbjct: 75 ADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT--------RTFRE----- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ D + AI+EA + IP++A Sbjct: 122 --------------------------------PRLIIATDPRADAQAIKEASYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S VD IP N+ +SI L L+A Sbjct: 150 LCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLA 182 >gi|290559143|gb|EFD92505.1| ribosomal protein S2 [Candidatus Parvarchaeum acidophilus ARMAN-5] gi|326422522|gb|EGD71918.1| Ribosomal protein S2 [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 199 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ + D + AI +A+++ IPIV + +T+++ +D +IPGN+ S SI L L+ Sbjct: 112 PKVLLITDPKSNRRAINDAKKINIPIVGIANTDNSTSFIDMIIPGNNKSGNSIGLILFLL 171 Query: 219 A 219 A Sbjct: 172 A 172 >gi|94502568|ref|YP_588402.1| ribosomal protein S2 [Zea mays subsp. mays] gi|114151653|ref|YP_740415.1| ribosomal protein S2 [Zea mays subsp. parviglumis] gi|40795007|gb|AAR91051.1| ribosomal protein S2 [Zea mays] gi|93116104|gb|ABE98736.1| ribosomal protein S2 [Zea mays subsp. mays] gi|102567986|gb|ABF70870.1| ribosomal protein S2 [Zea mays subsp. parviglumis] gi|102579653|gb|ABF70933.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 416 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 51/235 (21%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 ++ YI C RN I+D +T+ L+ AL + + + R F+ TK+ +M AK Sbjct: 29 LKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRSFFLKTKNLFIYSIM--AKM 86 Query: 89 SAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLK 146 + C+N S+W +G TN S + NK G ++ Sbjct: 87 WS--CINDSQWKIGAFFTN------SYANPKKFRSRNNKIYFGLNRQ------------- 125 Query: 147 RALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL---VDYVIPG 203 PD + ++ +R+ I EA R +IPI ++VD+ L ++Y IP Sbjct: 126 ------------PDCVVILHPDRKSSVILEADRSQIPIASLVDSTIPWKLDKRINYSIPA 173 Query: 204 NDDSSRSIALFCDLVASAAI---------DGIARQHSYMGADTKSAGETVVHSKE 249 ND R + LF + + I + R H KSA ++HS+E Sbjct: 174 NDP-MRLVYLFRNSITKTVILERKRITAKNRTPRSH-LSSCTEKSAAGIIIHSRE 226 >gi|18312202|ref|NP_558869.1| 30S ribosomal protein S2 [Pyrobaculum aerophilum str. IM2] gi|20978668|sp|Q8ZYE2|RS2_PYRAE RecName: Full=30S ribosomal protein S2P gi|18159640|gb|AAL63051.1| ribosomal protein S2 [Pyrobaculum aerophilum str. IM2] Length = 208 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 41/60 (68%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+FVVD + A+ EA ++ IP++A+VDT++ +D++IP N+ +S+AL ++A Sbjct: 119 DLLFVVDPKLDAQAVAEAAKMGIPVIALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILA 178 >gi|126458655|ref|YP_001054933.1| 30S ribosomal protein S2 [Pyrobaculum calidifontis JCM 11548] gi|209573676|sp|A3MS50|RS2_PYRCJ RecName: Full=30S ribosomal protein S2P gi|126248376|gb|ABO07467.1| SSU ribosomal protein S2P [Pyrobaculum calidifontis JCM 11548] Length = 208 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 38/54 (70%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 DL+FVVD + A+ EA ++ IP+VA+VDT++ +D++IP N+ +S+AL Sbjct: 119 DLLFVVDPRLDSQAVAEAAKMGIPVVALVDTDTPHQYIDFMIPCNNKGRKSLAL 172 >gi|93116152|gb|ABE98783.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 416 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 53/254 (20%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LL + G R + ++ YI C RN I+D +T+ L+ AL + + + R Sbjct: 12 KLLCTNAHLGRR--VAAHHLKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRS 69 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 F+ TK+ +M AK + C+N S+W +G TN S + NK Sbjct: 70 FFLKTKNLFIYSIM--AKMWS--CINDSQWKIGAFFTN------SYANPKKFRSRNNKIY 119 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 G ++ PD + ++ +R+ I EA R +IPI ++ Sbjct: 120 FGLNRQ-------------------------PDCVVILHPDRKSSVILEADRSQIPIASL 154 Query: 188 VDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAI---------DGIARQHSYMGA 235 VD+ L ++Y IP ND R + LF + + I + R H Sbjct: 155 VDSTIPWKLDKRINYSIPANDP-MRLVYLFRNSITKTVILERKRITAKNRTPRSH-LSSC 212 Query: 236 DTKSAGETVVHSKE 249 KSA ++HS+E Sbjct: 213 TEKSAAGIIIHSRE 226 >gi|93116060|gb|ABE98693.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 416 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 51/235 (21%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 ++ YI C RN I+D +T+ L+ AL + + + R F+ TK+ +M AK Sbjct: 29 LKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRSFFLKTKNFFIYSIM--AKM 86 Query: 89 SAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLK 146 + C+N S+W +G TN S + NK G ++ Sbjct: 87 WS--CINDSQWKIGAFFTN------SYANPKKFRSRNNKIYFGLNRQ------------- 125 Query: 147 RALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL---VDYVIPG 203 PD + ++ +R+ I EA R +IPI ++VD+ L ++Y IP Sbjct: 126 ------------PDCVVILHPDRKSSVILEADRSQIPIASLVDSTIPWKLDKRINYSIPA 173 Query: 204 NDDSSRSIALFCDLVASAAI---------DGIARQHSYMGADTKSAGETVVHSKE 249 ND R + LF + + I + R H KSA ++HS+E Sbjct: 174 NDP-MRLVYLFRNSITKTVILERKRITAKNRTPRSH-LSSCTEKSAAGIIIHSRE 226 >gi|6175935|gb|AAF05345.1| rps2 [Plasmodium berghei] Length = 192 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/126 (21%), Positives = 62/126 (49%), Gaps = 5/126 (3%) Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +ILF+ + ++ ++ + + + KW+ G++TNW + I LE+L Sbjct: 63 NNKILFIINNNLITNLIINICNLTNNFYI-IKWIPGLLTNWYMFKKKIIIYLWLEKLFKN 121 Query: 126 EN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KK N+ +KL + ++GI++M LP + N L ++E +L++ Sbjct: 122 KYIINILSKKCLYNLNNIYNKLYKNINGIKNMIVLPK--HICLLNYNGLILKEILKLKLI 179 Query: 184 IVAVVD 189 +++ ++ Sbjct: 180 LISFIN 185 >gi|169763710|ref|XP_001727755.1| 40S ribosomal protein S0 [Aspergillus oryzae RIB40] gi|238489667|ref|XP_002376071.1| 40S ribosomal protein S0 [Aspergillus flavus NRRL3357] gi|121938427|sp|Q2UBZ9|RSSA_ASPOR RecName: Full=40S ribosomal protein S0 gi|269969626|sp|B8N513|RSSA_ASPFN RecName: Full=40S ribosomal protein S0 gi|83770783|dbj|BAE60916.1| unnamed protein product [Aspergillus oryzae] gi|220698459|gb|EED54799.1| 40S ribosomal protein S0 [Aspergillus flavus NRRL3357] Length = 299 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N ME Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEQLLAAQCHLGSKNL--QVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AVENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVLA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S D VD IP N+ SI L ++A Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLA 181 >gi|218884669|ref|YP_002429051.1| 30S ribosomal protein S2 [Desulfurococcus kamchatkensis 1221n] gi|218766285|gb|ACL11684.1| 30S ribosomal protein S2P [Desulfurococcus kamchatkensis 1221n] Length = 215 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 37/55 (67%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 PD++ + DT + A++EA IPIVA+ DT++ D VD +IPGN+ +S+AL Sbjct: 128 PDVVVITDTRSDMQALKEAAETGIPIVALADTDNRVDYVDLIIPGNNKGRKSLAL 182 >gi|8574646|gb|AAF77639.1|AF193904_1 mitochondrial protein [Ginkgo biloba] Length = 130 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 16/127 (12%) Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNS-KW-LGGMMTNWKTVSQSIQKLRDLEELLN 124 GR L V T S + + + + A R + C+N +W +GG +TN+ + +K+R Sbjct: 13 GRSLSVNTNSLSDEIIEQMATRIDRSCINDYQWRIGGFLTNYSGMHFFPKKIR------- 65 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ R + +++R+ +L G PD + +++ +RE I EA RL+IPI Sbjct: 66 ------SRTFRYSTDKERNGKINSLGG-SGSNQQPDRVVIMNADRESSVILEADRLQIPI 118 Query: 185 VAVVDTN 191 V+ VD+N Sbjct: 119 VSPVDSN 125 >gi|145590328|ref|YP_001152330.1| 30S ribosomal protein S2 [Pyrobaculum arsenaticum DSM 13514] gi|209573675|sp|A4WH11|RS2_PYRAR RecName: Full=30S ribosomal protein S2P gi|145282096|gb|ABP49678.1| SSU ribosomal protein S2P [Pyrobaculum arsenaticum DSM 13514] Length = 208 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 41/60 (68%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+FVVD + A+ EA ++ +P++A+VDT++ +D++IP N+ +S+AL ++A Sbjct: 119 DLLFVVDPKLDAQAVAEAAKMGVPVIALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILA 178 >gi|284162049|ref|YP_003400672.1| ribosomal protein S2 [Archaeoglobus profundus DSM 5631] gi|284012046|gb|ADB57999.1| ribosomal protein S2 [Archaeoglobus profundus DSM 5631] Length = 203 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 41/61 (67%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D +K A++EA R+ IP+VA+ DTN++ VD VIP N+ +++AL L+ Sbjct: 120 PDVVIVTDPAIDKQAVEEATRVGIPVVALCDTNNSTANVDLVIPTNNKGRKALALVYWLL 179 Query: 219 A 219 A Sbjct: 180 A 180 >gi|8574651|gb|AAF77641.1|AF193907_1 mitochondrial protein [Pinus sp. Qiu 94013] Length = 123 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 23/139 (16%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNS-KW-LGGMMTNWKTVSQS 112 A I + G +L V T S + D V + A + + C+N +W +GG +TN ++ Sbjct: 1 ACHSIGSPIREKGLLLSVNTNSLSDDIVEQMATKIDRSCINDYQWRIGGFLTNSSSM--- 57 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 F ++ + R R+ R ++ G PD + +++ +RE Sbjct: 58 ---------------HLFPIPRKIRLSRSRN---RKINFFGGSGQQPDRVVIMNADRESS 99 Query: 173 AIQEARRLRIPIVAVVDTN 191 I EA RL+IPIV++VD+N Sbjct: 100 VILEADRLQIPIVSLVDSN 118 >gi|8574705|gb|AAF77668.1|AF193935_1 mitochondrial protein [Grevillea robusta] Length = 134 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACNFIGYPIRQKGRSFFVNTNSLFDEIIEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R ++ +++N + PD + + D +R+ Sbjct: 55 PKKIR-------------SRNKKINFGSNQQ---------------PDCVIIFDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA RL+IPIV++VD+N + + + Y IP ND Sbjct: 87 VILEADRLQIPIVSLVDSNIPLESYNKITYPIPAND 122 >gi|148676436|gb|EDL08383.1| mitochondrial ribosomal protein S2, isoform CRA_b [Mus musculus] Length = 211 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 38/74 (51%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 122 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 181 Query: 66 GGRILFVATKSQAS 79 G ILFV+ Q S Sbjct: 182 KGIILFVSRNRQFS 195 >gi|300123321|emb|CBK24594.2| unnamed protein product [Blastocystis hominis] Length = 245 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 51/208 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN--THIIDLSQTVPMLQKALQVISDTVAR 65 +R++L + +G +N N M+ Y+F RN HII+L++T L A ++I + Sbjct: 11 VRKMLVARTHYGTKNL--NFMMKDYVF-RRNKEGVHIINLAKTWEKLVLAARIIV-AIEN 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ + + + V++ K + ++ ++ G TN Q ++ R+ Sbjct: 67 PQDVIVIGARENSQRAVLKFCKYTGCQTISGRYTPGTFTN-----QITKQFRE------- 114 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + +K AI EA + IP + Sbjct: 115 ---------------------------------PRLLIVTDPSCDKQAIHEAACVNIPTI 141 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 A DT+S + VD IP N + SI L Sbjct: 142 AFCDTDSPLEYVDCAIPCNTKNKNSIGL 169 >gi|169835930|ref|ZP_02869118.1| 30S ribosomal protein S2 [candidate division TM7 single-cell isolate TM7a] Length = 43 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/37 (54%), Positives = 27/37 (72%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIID 44 I+ LLE+GV FGH+ W+PKM YI +R ++HIID Sbjct: 7 IKALLEAGVHFGHKTSRWHPKMAPYIHSKRQDSHIID 43 >gi|294952420|ref|XP_002787302.1| 40S ribosomal protein S0-A, putative [Perkinsus marinus ATCC 50983] gi|239902231|gb|EER19098.1| 40S ribosomal protein S0-A, putative [Perkinsus marinus ATCC 50983] Length = 225 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA IP++A+ DT+S D VD IP N+ SIAL L+ Sbjct: 67 PRLLIVTDPRTDSQAIKEAAYANIPVIALCDTDSPLDFVDIAIPCNNKGKESIALLYYLL 126 Query: 219 A 219 A Sbjct: 127 A 127 >gi|194033232|ref|YP_002000569.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|60498744|dbj|BAC19874.2| Ribosomal protein S2 [Oryza sativa Japonica Group] Length = 483 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 41/218 (18%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 YI R+ I+D +T+ L+ AL I + + R + T ++E Sbjct: 105 YICGSRSGIAILDSDKTLICLRTALHFIGSLIRKKCRFFLLKTNHLFRCEILEKMVS--- 161 Query: 92 YCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 C+N S+W +G +N+ KK++ + K+ Sbjct: 162 -CINDSQWKIGTFFSNY-----------------------LAKKKKFRLRTKKINF---- 193 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGNDD 206 + PD +++ +R+ I EA R +IPIV +VD+ + + Y IP N D Sbjct: 194 ----GLNQQPDCAVILNADRKSSVILEAARSQIPIVFLVDSTIPGESHKRITYPIPAN-D 248 Query: 207 SSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 S + + LFC LV I H M K+ V Sbjct: 249 SIQFVYLFCHLVTKTGILECKSVHEPMQTGLKAVDSLV 286 >gi|41179034|ref|NP_958390.1| ribosomal protein S2 [Chlamydomonas reinhardtii] gi|32699674|sp|Q8HUH1|RR2B_CHLRE RecName: Full=Putative 30S ribosomal S2-like protein gi|23307785|gb|AAN17820.1| ribosomal protein S2 [Chlamydomonas reinhardtii] gi|28269757|tpg|DAA00935.1| TPA_inf: ribosomal protein S2 [Chlamydomonas reinhardtii] Length = 208 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%) Query: 139 ERKRDKLKRALDGIRDMGGLPD------LMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++K +L++ L GI +M + + + ++ E A++E ++L I + +VDTN Sbjct: 102 KKKWQRLEKYLGGISNMTKIKEKQIANNVAIIIGQQEEMNAVRECQKLGIKMFHIVDTNC 161 Query: 193 NPDLVDYVIPGNDDSSRSIAL 213 NP L D+ IP NDD+ SI Sbjct: 162 NPGLADHFIPANDDARNSIKF 182 >gi|223997552|ref|XP_002288449.1| 40S ribosomal protein-like protein [Thalassiosira pseudonana CCMP1335] gi|220975557|gb|EED93885.1| 40S ribosomal protein-like protein [Thalassiosira pseudonana CCMP1335] Length = 243 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L +GV G RN + ME YI+ R + HI+++ +T + A +VI + Sbjct: 18 IQMMLSAGVHTGTRNS--DSSMEEYIWRRRKDGLHILNIGKTWEKIMLAARVIV-AIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A + + ++ G TN Q ++ R+ Sbjct: 75 EDVVAISARPWGMRAVLKFAHYTGAQSIAGRFTPGTFTN-----QITKQFRE-------- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + A++E+ + IP++A Sbjct: 122 --------------------------------PRLLIVTDPRTDSQAVRESSYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D++S VD IP N+ SI L L+A Sbjct: 150 FCDSDSPLQFVDIAIPANNKGKHSIGLIYWLLA 182 >gi|327311476|ref|YP_004338373.1| 30S ribosomal protein S2 [Thermoproteus uzoniensis 768-20] gi|326947955|gb|AEA13061.1| 30S ribosomal protein S2 [Thermoproteus uzoniensis 768-20] Length = 210 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 40/60 (66%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+ VVD + A++EA + IP+VA+VDT++ D +D +IP N+ RS+AL ++A Sbjct: 120 DLLVVVDPKLDSQAVREAAIMGIPVVALVDTDTPHDFIDLMIPCNNKGRRSLALIFWILA 179 >gi|8574707|gb|AAF77669.1|AF193936_1 mitochondrial protein [Platanus occidentalis] Length = 134 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R ++ +++N + PD + ++D +R+ Sbjct: 55 PKKIR-------------SRNKKINFGSNQQ---------------PDCVVIIDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA RL+IPI ++VD+N + + Y IP ND Sbjct: 87 VILEADRLQIPIASLVDSNIPLGSYKRITYPIPAND 122 >gi|91089051|ref|XP_970069.1| PREDICTED: similar to ribosome-associated protein P40 [Tribolium castaneum] gi|270012401|gb|EFA08849.1| hypothetical protein TcasGA2_TC006550 [Tribolium castaneum] Length = 302 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + ++L +G G N + +ME+Y++ R + HII+L +T L A + I + Sbjct: 15 VTKMLAAGTHVGTTNV--DFQMEQYVYKRRADGIHIINLRKTWEKLLLAARAIV-AIEHP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++++ V++ A + + ++ G TN Q R+ Sbjct: 72 SEVFVISSRPYGQRAVLKFAAHTGATPIAGRFTPGAFTN-----QIQAAFRE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + I EA + IP++A Sbjct: 119 --------------------------------PRLLIVTDPAYDHQPITEASYVNIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + T+S VD IPGN+ S+ SI L L+A Sbjct: 147 LCITDSPLRFVDIAIPGNNKSAHSIGLMWWLLA 179 >gi|238608426|ref|XP_002397228.1| hypothetical protein MPER_02384 [Moniliophthora perniciosa FA553] gi|215471270|gb|EEB98158.1| hypothetical protein MPER_02384 [Moniliophthora perniciosa FA553] Length = 236 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +ME Y++ RN+ HI+++ +T L A ++I+ V Sbjct: 65 IQLLLAAQCHIGTKNC--DKQMEPYVWKRRNDGIHILNIGKTWEKLVFAARIIA-AVENP 121 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G +TN+ T R +E Sbjct: 122 NDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSLTNYIT--------RSFKE----- 168 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 169 --------------------------------PRLIIVTDPRVDHQAIREAAYVNIPVIA 196 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT++ VD IP + S SI L L+A Sbjct: 197 LCDTDAPLKFVDVAIPNKNKSKHSIGLIWWLLA 229 >gi|302348801|ref|YP_003816439.1| 30S ribosomal protein S2P [Acidilobus saccharovorans 345-15] gi|302329213|gb|ADL19408.1| 30S ribosomal protein S2P [Acidilobus saccharovorans 345-15] Length = 239 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 38/55 (69%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P+++ V DT ++ A+ EA ++ +P+VA+ DT+S + VD +IP N+ RS+AL Sbjct: 144 PEVVVVTDTRTDRQAVVEASKIGVPVVALADTDSRVEDVDLIIPANNKGRRSLAL 198 >gi|70605938|ref|YP_254808.1| 30S ribosomal protein S2 [Sulfolobus acidocaldarius DSM 639] gi|73920775|sp|P39478|RS2_SULAC RecName: Full=30S ribosomal protein S2P gi|68566586|gb|AAY79515.1| 30S ribosomal protein S2P [Sulfolobus acidocaldarius DSM 639] Length = 225 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 39/61 (63%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ V D + AI+EA ++ IPIVA DT++ D +D +IP N+ +S+AL ++ Sbjct: 136 PEVLIVTDPRTDLQAIKEASKVGIPIVAFTDTDARVDFIDVIIPANNKGRKSLALLYWVL 195 Query: 219 A 219 A Sbjct: 196 A 196 >gi|296243114|ref|YP_003650601.1| 30S ribosomal protein S2P [Thermosphaera aggregans DSM 11486] gi|296095698|gb|ADG91649.1| SSU ribosomal protein S2P [Thermosphaera aggregans DSM 11486] Length = 219 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 36/56 (64%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 PD++ + D + A++EA + +PIV+ DT++ D +D VIPGN+ +S+AL Sbjct: 132 PDIVLLTDPRADAQALKEAAEIGLPIVSFADTDNKTDFIDLVIPGNNKGRKSLALL 187 >gi|115391503|ref|XP_001213256.1| 40S ribosomal protein S0 [Aspergillus terreus NIH2624] gi|121739314|sp|Q0CQF6|RSSA_ASPTN RecName: Full=40S ribosomal protein S0 gi|114194180|gb|EAU35880.1| 40S ribosomal protein S0 [Aspergillus terreus NIH2624] Length = 300 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNL--QVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S D VD IP N+ SI L L+A Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHSIGLVWWLLA 181 >gi|15922383|ref|NP_378052.1| 30S ribosomal protein S2 [Sulfolobus tokodaii str. 7] gi|20978670|sp|Q96YW5|RS2_SULTO RecName: Full=30S ribosomal protein S2P gi|15623172|dbj|BAB67161.1| 225aa long hypothetical 30S ribosomal protein S2 [Sulfolobus tokodaii str. 7] Length = 225 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 39/61 (63%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ D + AI+EA ++ IP+VA DT++ D VD++IP N+ +S+AL ++ Sbjct: 136 PEVIVATDPRTDLQAIKEASKVGIPVVAFADTDAKVDFVDFIIPANNKGRKSLALLYWVL 195 Query: 219 A 219 A Sbjct: 196 A 196 >gi|171184543|ref|YP_001793462.1| 30S ribosomal protein S2 [Thermoproteus neutrophilus V24Sta] gi|209573783|sp|B1YA42|RS2_THENV RecName: Full=30S ribosomal protein S2P gi|170933755|gb|ACB39016.1| ribosomal protein S2 [Thermoproteus neutrophilus V24Sta] Length = 206 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 40/60 (66%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+FVVD + A+ EA ++ IP+VA+VDT++ +D ++P N+ +S+AL ++A Sbjct: 118 DLLFVVDPKLDAQAVTEAAKMGIPVVALVDTDTPHQYIDLMVPCNNKGRKSLALIFWILA 177 >gi|300176696|emb|CBK24361.2| unnamed protein product [Blastocystis hominis] Length = 243 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 49/207 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +R++L + +G +N N M+ Y+F + HII+L++T L A ++I + Sbjct: 7 VRKMLVARAHYGTKNL--NFMMKDYVFRRTKEGVHIINLAKTWEKLVLAARMIV-AIEHP 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ + + + V++ K + ++ ++ G TN Q ++ R+ Sbjct: 64 EDVIVIGARENSQRAVLKFCKYTGCQTISGRYTPGTFTN-----QITKQFRE-------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D +K AI EA + IP +A Sbjct: 111 --------------------------------PRLLIVTDPRFDKQAIHEAACVNIPTIA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIAL 213 DT+S + VD IP N ++ SI L Sbjct: 139 FCDTDSPLEYVDCAIPCNTKNNYSIGL 165 >gi|307107330|gb|EFN55573.1| hypothetical protein CHLNCDRAFT_134066 [Chlorella variabilis] Length = 288 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 49/212 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 ++ LL S G +N MERY++ RN+ + +L++T LQ A ++I + Sbjct: 11 VQMLLASQAHLGTKN--CTAAMERYVYRRRNDGIFVFNLAKTWEKLQLAARIIV-AIENP 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ ++ + V++ A S + G TN IQK Sbjct: 68 QDIVAISARPYGQRAVLKFAHYSGAKATVGRHTPGAFTN------QIQK----------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 GF + P L+ V D + +I+EA + IP++A Sbjct: 111 --GFEE--------------------------PRLLIVTDPRTDHQSIKEAAYMNIPVIA 142 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 DT+S+ VD IP N+ SI + L+ Sbjct: 143 FCDTDSDLXGVDVAIPANNKGKHSIGVLYYLL 174 >gi|170092519|ref|XP_001877481.1| predicted protein [Laccaria bicolor S238N-H82] gi|229891586|sp|B0D174|RSSA_LACBS RecName: Full=40S ribosomal protein S0 gi|164647340|gb|EDR11584.1| predicted protein [Laccaria bicolor S238N-H82] Length = 283 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +ME Y++ R + HI+++ +T L A +VI+ V Sbjct: 16 IQLLLAAQCHIGTKNC--DKQMEPYVWKRRADGIHILNIGKTWEKLVLAARVIA-AVENP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T R +E Sbjct: 73 NDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYIT--------RSFKE----- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRLIIVTDPRVDHQAIREASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT++ VD IP N+ + SI L L+A Sbjct: 148 LCDTDAPLKFVDVAIPTNNKTRHSIGLIWWLLA 180 >gi|145233361|ref|XP_001400053.1| 40S ribosomal protein S0 [Aspergillus niger CBS 513.88] gi|229891580|sp|A2QE32|RSSA_ASPNC RecName: Full=40S ribosomal protein S0 gi|134056981|emb|CAK44328.1| unnamed protein product [Aspergillus niger] Length = 298 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNL--QSHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S D VD IP N+ +I L L+A Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLA 181 >gi|166895619|ref|YP_001661413.1| ribosomal protein S2 [Cycas taitungensis] gi|166706951|dbj|BAF98415.1| ribosomal protein S2 [Cycas taitungensis] Length = 216 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 39/211 (18%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ L + G R + K+ YI+ N I+D +T+ + A I + + Sbjct: 7 LVLQKSLSTNAHLGRRVAAHHSKV--YIYGFGNEIAILDPDKTLICSRNACHSIGSPIRK 64 Query: 66 GGRILFVATKSQASDCVMEAA----KRSAQYCVNS-KW-LGGMMTNWKTVSQSIQKLRDL 119 GR L V T S + + + A RS C+N +W +GG +T++ ++ +K+R Sbjct: 65 KGRSLPVNTNSLFDEIIEQMALSLIDRS---CINDYQWRIGGFLTDYSSMHLFPKKIR-- 119 Query: 120 EELLNKENQGFTK--KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 F++ +++N +R PD + +++ +RE I A Sbjct: 120 ----------FSRPGNKKINFFGGSGSNQR-----------PDRVVIMNADRESSVILGA 158 Query: 178 RRLRIPIVAVVDTNSNPDL---VDYVIPGND 205 RL+IPIV++VD+N L + Y IP ND Sbjct: 159 DRLQIPIVSLVDSNIPLGLCKGITYPIPAND 189 >gi|14601603|ref|NP_148143.1| 30S ribosomal protein S2 [Aeropyrum pernix K1] gi|6685917|sp|Q9YB45|RS2_AERPE RecName: Full=30S ribosomal protein S2P gi|5105440|dbj|BAA80753.1| 30S ribosomal protein S2P [Aeropyrum pernix K1] Length = 205 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 39/56 (69%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 PD++ V D ++ A+ EA ++ IP+VA+VDT+++ + +D VIP N+ RS+AL Sbjct: 115 PDVVVVTDPRMDRQAVVEASKVGIPVVALVDTDNSIENIDLVIPANNRGRRSLALI 170 >gi|227831070|ref|YP_002832850.1| 30S ribosomal protein S2 [Sulfolobus islandicus L.S.2.15] gi|229579951|ref|YP_002838350.1| 30S ribosomal protein S2 [Sulfolobus islandicus Y.G.57.14] gi|229581388|ref|YP_002839787.1| 30S ribosomal protein S2 [Sulfolobus islandicus Y.N.15.51] gi|284998566|ref|YP_003420334.1| hypothetical protein LD85_2320 [Sulfolobus islandicus L.D.8.5] gi|227457518|gb|ACP36205.1| ribosomal protein S2 [Sulfolobus islandicus L.S.2.15] gi|228010666|gb|ACP46428.1| ribosomal protein S2 [Sulfolobus islandicus Y.G.57.14] gi|228012104|gb|ACP47865.1| ribosomal protein S2 [Sulfolobus islandicus Y.N.15.51] gi|284446462|gb|ADB87964.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5] Length = 229 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P ++ V D + AI+EA ++ IPIVA DT++ D +D +IP N+ +S+AL Sbjct: 140 PKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALL 195 >gi|194763916|ref|XP_001964078.1| GF21363 [Drosophila ananassae] gi|229891598|sp|B3MRX2|RSSA_DROAN RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|190619003|gb|EDV34527.1| GF21363 [Drosophila ananassae] Length = 270 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +II+L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIDNASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 179 >gi|162952033|ref|NP_001106143.1| 40S ribosomal protein SA [Bombyx mori] gi|74904851|sp|Q5UAP4|RSSA_BOMMO RecName: Full=40S ribosomal protein SA gi|54609281|gb|AAV34856.1| ribosomal protein SA [Bombyx mori] Length = 306 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLGAENV--NFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN IQ Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTN------QIQA---- 114 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 R+ P L+ V+D ++ I EA Sbjct: 115 -------------------------------AFRE----PRLLIVLDPAQDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A+ +T+S VD IP N SS SI L L+A Sbjct: 140 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 179 >gi|146165118|ref|XP_001014441.2| ribosomal protein S2 containing protein [Tetrahymena thermophila] gi|319443357|pdb|2XZM|B Chain B, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 gi|319443392|pdb|2XZN|B Chain B, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 2 gi|146145600|gb|EAR94196.2| ribosomal protein S2 containing protein [Tetrahymena thermophila SB210] gi|315570293|tpg|DAA33965.1| TPA_exp: 40S ribosomal protein rpS0e [Tetrahymena thermophila] Length = 241 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 50/214 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL S N N +M+RYI + N H I++ +T ++ A +VI+ V Sbjct: 10 IKRLLASNCHQATINL--NNQMKRYISHKGVNGIHYINIEETWQKIKLAARVIA-AVQHP 66 Query: 67 GRILFVATKSQASDCVME-AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V ++ ++ A + +S+W G +TN++T+ EE Sbjct: 67 EDVMVVCSRIYGQRAAIKFAGYTHCKSTSSSRWTPGTLTNYQTLK--------YEE---- 114 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P ++ V D + AI+EA + IP++ Sbjct: 115 ---------------------------------PRVLIVTDPRSDFQAIKEASYVNIPVI 141 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ D++S VD VIP N+ S+ SI++ ++A Sbjct: 142 ALCDSDSPLAYVDVVIPCNNRSTESISMIYWMIA 175 >gi|154320664|ref|XP_001559648.1| 40S ribosomal protein S0 [Botryotinia fuckeliana B05.10] gi|229891581|sp|A6RMY2|RSSA_BOTFB RecName: Full=40S ribosomal protein S0 gi|150853493|gb|EDN28685.1| 40S ribosomal protein S0 [Botryotinia fuckeliana B05.10] Length = 296 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHLGAKNL--QVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ SI L ++A Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLA 181 >gi|227828312|ref|YP_002830092.1| 30S ribosomal protein S2 [Sulfolobus islandicus M.14.25] gi|229585542|ref|YP_002844044.1| 30S ribosomal protein S2 [Sulfolobus islandicus M.16.27] gi|238620504|ref|YP_002915330.1| 30S ribosomal protein S2 [Sulfolobus islandicus M.16.4] gi|227460108|gb|ACP38794.1| ribosomal protein S2 [Sulfolobus islandicus M.14.25] gi|228020592|gb|ACP55999.1| ribosomal protein S2 [Sulfolobus islandicus M.16.27] gi|238381574|gb|ACR42662.1| ribosomal protein S2 [Sulfolobus islandicus M.16.4] gi|323475382|gb|ADX85988.1| ribosomal protein S2 [Sulfolobus islandicus REY15A] gi|323478107|gb|ADX83345.1| ribosomal protein S2 [Sulfolobus islandicus HVE10/4] Length = 229 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P ++ V D + AI+EA ++ IPIVA DT++ D +D +IP N+ +S+AL Sbjct: 140 PKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALL 195 >gi|156040389|ref|XP_001587181.1| 40S ribosomal protein S0 [Sclerotinia sclerotiorum 1980] gi|229891610|sp|A7F2R3|RSSA_SCLS1 RecName: Full=40S ribosomal protein S0 gi|154696267|gb|EDN96005.1| 40S ribosomal protein S0 [Sclerotinia sclerotiorum 1980 UF-70] Length = 297 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHLGSKNL--QVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ SI L ++A Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLA 181 >gi|296417633|ref|XP_002838457.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634396|emb|CAZ82648.1| unnamed protein product [Tuber melanosporum] Length = 288 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N M+ Y++ R + +II++ +T + A ++I+ T+ Sbjct: 16 IEMLLAAQAHIGAKNL--QVHMDPYVWKTRPDGVNIINIGKTWEKIVLAARIIA-TIDNP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+ +S V++ A + + ++ G TN+ T R +E Sbjct: 73 ADVCAVSARSFGQRAVLKFATHTGATAIAGRFTPGNFTNYIT--------RSFKE----- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD VIP N+ +I L ++A Sbjct: 148 LCDTDSPTEFVDVVIPTNNKGRHAIGLIWWMLA 180 >gi|159042555|ref|YP_001541807.1| 30S ribosomal protein S2 [Caldivirga maquilingensis IC-167] gi|209573652|sp|A8MC33|RS2_CALMQ RecName: Full=30S ribosomal protein S2P gi|157921390|gb|ABW02817.1| ribosomal protein S2 [Caldivirga maquilingensis IC-167] Length = 215 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 37/60 (61%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+ V D + AI EA IP++A+VDT+S+P +D +IP N+ S+AL L+A Sbjct: 124 DLLMVADPKTDFQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLA 183 >gi|49258822|pdb|1S1H|B Chain B, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is In File 1s1i Length = 185 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 49/210 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL + G RN E Y+F R + H+I++ +T L A ++I+ + + Sbjct: 4 LLAANTHLGARNV--QVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIA-AIPNPEDV 60 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 + +++++ V++ A + + ++ G TN+ T R +E Sbjct: 61 VAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT--------RSFKE-------- 104 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 105 -----------------------------PRLVIVTDPRSDAQAIKEASYVNIPVIALTD 135 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +S + VD IP N+ SI L L+A Sbjct: 136 LDSPSEFVDVAIPCNNRGKHSIGLIWYLLA 165 >gi|332796341|ref|YP_004457841.1| 30S ribosomal protein S2 [Acidianus hospitalis W1] gi|332694076|gb|AEE93543.1| ribosomal protein S2 [Acidianus hospitalis W1] Length = 226 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ V D + AI+EA + IP+VA DT++ + VD VIP N+ +S+AL L+ Sbjct: 137 PEVLLVSDPRTDTQAIKEAADMGIPVVAFADTDAKIEYVDLVIPANNKGRKSLALLYWLL 196 Query: 219 A 219 A Sbjct: 197 A 197 >gi|6323077|ref|NP_013149.1| Rps0bp [Saccharomyces cerevisiae S288c] gi|1171635|sp|P46654|RSSA2_YEAST RecName: Full=40S ribosomal protein S0-B; AltName: Full=Nucleic acid-binding protein NAB1B gi|229891576|sp|B3LT19|RSSA2_YEAS1 RecName: Full=40S ribosomal protein S0-B; AltName: Full=Nucleic acid-binding protein NAB1B gi|229891577|sp|A7A0V3|RSSA2_YEAS7 RecName: Full=40S ribosomal protein S0-B; AltName: Full=Nucleic acid-binding protein NAB1B gi|1002792|gb|AAC49276.1| Yst2p [Saccharomyces cerevisiae] gi|1181269|emb|CAA64295.1| nucleic acid binding protein [Saccharomyces cerevisiae] gi|1370302|emb|CAA97578.1| NAB1B [Saccharomyces cerevisiae] gi|151941216|gb|EDN59594.1| ribosomal protein S0B [Saccharomyces cerevisiae YJM789] gi|190406087|gb|EDV09354.1| ribosomal protein S0B [Saccharomyces cerevisiae RM11-1a] gi|259148037|emb|CAY81286.1| Rps0bp [Saccharomyces cerevisiae EC1118] gi|285813470|tpg|DAA09366.1| TPA: Rps0bp [Saccharomyces cerevisiae S288c] Length = 252 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 49/210 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL + G RN E Y+F R + H+I++ +T L A ++I+ + + Sbjct: 17 LLAANTHLGARNV--QVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIA-AIPNPEDV 73 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 + +++++ V++ A + + ++ G TN+ T R +E Sbjct: 74 VAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT--------RSFKE-------- 117 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 118 -----------------------------PRLVIVTDPRLDAQAIKEASYVNIPVIALTD 148 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +S + VD IP N+ SI L L+A Sbjct: 149 LDSPSEFVDVAIPCNNRGKHSIGLIWYLLA 178 >gi|50294117|ref|XP_449470.1| hypothetical protein [Candida glabrata CBS 138] gi|74661046|sp|Q6FJX4|RSSA_CANGA RecName: Full=40S ribosomal protein S0 gi|49528784|emb|CAG62446.1| unnamed protein product [Candida glabrata] Length = 251 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 49/210 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL + G RN E Y+F R + H+I++ +T L A ++I+ + + Sbjct: 17 LLAANTHLGARNV--QVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIA-AIPNPEDV 73 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 + +++++ V++ A + + ++ G TN+ T R +E Sbjct: 74 VAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT--------RSFKE-------- 117 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 118 -----------------------------PRLVIVTDPRSDAQAIKEASYVNIPVIALTD 148 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +S + VD IP N+ SI L L+A Sbjct: 149 LDSPSEYVDVAIPCNNRGKHSIGLIWYLLA 178 >gi|281500808|pdb|3JYV|B Chain B, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 193 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 49/210 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL + G RN E Y+F R + H+I++ +T L A ++I+ + + Sbjct: 9 LLAANTHLGARNV--QVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIA-AIPNPEDV 65 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 + +++++ V++ A + + ++ G TN+ T R +E Sbjct: 66 VAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT--------RSFKE-------- 109 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 110 -----------------------------PRLVIVTDPRSDAQAIKEASYVNIPVIALTD 140 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +S + VD IP N+ SI L L+A Sbjct: 141 LDSPSEFVDVAIPCNNRGKHSIGLIWYLLA 170 >gi|121706100|ref|XP_001271313.1| 40S ribosomal protein S0 [Aspergillus clavatus NRRL 1] gi|229891578|sp|A1CL63|RSSA_ASPCL RecName: Full=40S ribosomal protein S0 gi|119399459|gb|EAW09887.1| 40S ribosomal protein S0 [Aspergillus clavatus NRRL 1] Length = 298 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S D VD IP N+ +I L L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|15897033|ref|NP_341638.1| 30S ribosomal protein S2 [Sulfolobus solfataricus P2] gi|284173377|ref|ZP_06387346.1| 30S ribosomal protein S2 [Sulfolobus solfataricus 98/2] gi|2500394|sp|P95993|RS2_SULSO RecName: Full=30S ribosomal protein S2P gi|1707827|emb|CAA69535.1| orf c05004 [Sulfolobus solfataricus P2] gi|13813198|gb|AAK40428.1| SSU ribosomal protein S2AB (rps2AB) [Sulfolobus solfataricus P2] Length = 231 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P ++ V D + AI+EA ++ IPIVA DT++ D +D +IP N+ +S+AL Sbjct: 142 PKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALL 197 >gi|6321653|ref|NP_011730.1| Rps0ap [Saccharomyces cerevisiae S288c] gi|417336|sp|P32905|RSSA1_YEAST RecName: Full=40S ribosomal protein S0-A; AltName: Full=Nucleic acid-binding protein NAB1A gi|229891573|sp|B3LI22|RSSA1_YEAS1 RecName: Full=40S ribosomal protein S0-A; AltName: Full=Nucleic acid-binding protein NAB1A gi|229891574|sp|A6ZUM5|RSSA1_YEAS7 RecName: Full=40S ribosomal protein S0-A; AltName: Full=Nucleic acid-binding protein NAB1A gi|313103664|pdb|3IZB|A Chain A, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome gi|315113448|pdb|3O2Z|A Chain A, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. gi|315113476|pdb|3O30|A Chain A, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. gi|172026|gb|AAB05643.1| nucleic acid-binding protein [Saccharomyces cerevisiae] gi|1323385|emb|CAA97241.1| NAB1A [Saccharomyces cerevisiae] gi|151943491|gb|EDN61802.1| ribosomal protein S0A [Saccharomyces cerevisiae YJM789] gi|190406776|gb|EDV10043.1| ribosomal protein S0A [Saccharomyces cerevisiae RM11-1a] gi|259146715|emb|CAY79972.1| Rps0ap [Saccharomyces cerevisiae EC1118] gi|285812408|tpg|DAA08308.1| TPA: Rps0ap [Saccharomyces cerevisiae S288c] Length = 252 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 49/210 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL + G RN E Y+F R + H+I++ +T L A ++I+ + + Sbjct: 17 LLAANTHLGARNV--QVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIA-AIPNPEDV 73 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 + +++++ V++ A + + ++ G TN+ T R +E Sbjct: 74 VAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT--------RSFKE-------- 117 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 118 -----------------------------PRLVIVTDPRSDAQAIKEASYVNIPVIALTD 148 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +S + VD IP N+ SI L L+A Sbjct: 149 LDSPSEFVDVAIPCNNRGKHSIGLIWYLLA 178 >gi|261601687|gb|ACX91290.1| ribosomal protein S2 [Sulfolobus solfataricus 98/2] Length = 226 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P ++ V D + AI+EA ++ IPIVA DT++ D +D +IP N+ +S+AL Sbjct: 137 PKVLLVSDPRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALL 192 >gi|11466323|ref|NP_051151.1| ribosomal protein S2 [Cafeteria roenbergensis] gi|6180105|gb|AAF05802.1|AF193903_25 ribosomal protein S2 [Cafeteria roenbergensis] Length = 249 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/244 (19%), Positives = 99/244 (40%), Gaps = 28/244 (11%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + Q ++Q Q GHR + + M Y+ + + I++ + ++A Q+++ Sbjct: 4 LTVNQVKVKQFTYLRAQIGHRRRILDKTMNSYVAGNQQDISILNSIFILWSWERASQILT 63 Query: 61 DTVARGGRILFVATKSQASDCVME---------AAKRSAQYC--VNSKWLGGMMTNWKTV 109 + +F++T + + R + V + W GG+++NW + Sbjct: 64 RVFLFRQKFVFLSTNKFIPNSWLNNFLEWHFQLKNNRYPHFLGYVGTNWYGGLLSNWSKL 123 Query: 110 SQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMG---GLPDLMFVVD 166 + L ++LL K++ + + R L + L G G PD +F + Sbjct: 124 WAFV--LLVFKDLLKKKH----------VSKTRHLLMKKLAGRISKGNQPAFPDFLFALT 171 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +K + E+ +R+ V +VD++ N + GNDDS I L+ + + Sbjct: 172 A--DKGLLHESDLIRLVSVGLVDSDKNMKSASISLIGNDDSFLLIEFMVRLIEQSFLVSS 229 Query: 227 ARQH 230 +H Sbjct: 230 REEH 233 >gi|115278624|ref|YP_762505.1| ribosomal protein S2 [Tripsacum dactyloides] gi|114432115|gb|ABI74664.1| ribosomal protein S2 [Tripsacum dactyloides] Length = 559 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 38/195 (19%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 YI C RN I+D +T+ L+ AL + + + R F+ TK+ +M AK + Sbjct: 30 YIRCFRNGIAILDSDKTLICLRNALNFLGYLICQKSRSFFLKTKNLFIYSIM--AKMWS- 86 Query: 92 YCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 C+N S+W +G +TN N ++ R + K+ Sbjct: 87 -CINDSQWKIGAFLTN----------------------------SYANPKKFRSRNKKIY 117 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD-TNSNPDLVDYVIPGNDDSS 208 G+ PD + ++ +R+ I EA R +IPI +VD T + + IP ND Sbjct: 118 FGLNRQ---PDCVVILHPDRKSSVILEADRSQIPIAYLVDSTIPSHKRFTFTIPANDPLR 174 Query: 209 RSIALFCDLVASAAI 223 + LF + + I Sbjct: 175 LLVYLFRNSITKTVI 189 >gi|229891756|sp|Q5B8F8|RSSA_EMENI RecName: Full=40S ribosomal protein S0 gi|259485872|tpe|CBF83264.1| TPA: 40S ribosomal protein S0 [Source:UniProtKB/Swiss-Prot;Acc:Q5B8F8] [Aspergillus nidulans FGSC A4] Length = 293 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S D VD IP N+ +I L L+ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|302679998|ref|XP_003029681.1| hypothetical protein SCHCODRAFT_69443 [Schizophyllum commune H4-8] gi|300103371|gb|EFI94778.1| hypothetical protein SCHCODRAFT_69443 [Schizophyllum commune H4-8] Length = 303 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 50/214 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNT--HIIDLSQTVPMLQKALQVISDTVAR 65 I+ LL + G +N + +ME Y++ R + H+I++ +T L A ++I+ V Sbjct: 16 IQLLLAAQCHIGTKNC--DKQMEPYVWKRRADAGIHVINIGKTWEKLVFAARIIA-AVEN 72 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 + ++ + V++ A + + ++ G TN+ T R +E Sbjct: 73 PNDVCVISARPYGHRAVLKFAANTGAQAIAGRFTPGSFTNYIT--------RSFKE---- 120 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + AI+EA + IP++ Sbjct: 121 ---------------------------------PRLIIVTDPRVDHQAIREASYVNIPVI 147 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ DT++ VD IP N+ + SI L L+A Sbjct: 148 ALADTDAPLKFVDVAIPTNNKTRHSIGLIWWLLA 181 >gi|255578243|ref|XP_002529989.1| 40S ribosomal protein sa, putative [Ricinus communis] gi|223530512|gb|EEF32394.1| 40S ribosomal protein sa, putative [Ricinus communis] Length = 309 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY+F RN+ +II+L +T LQ A +VI ++ Sbjct: 23 IQMMLAAEVHLGTKNC--DFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV-SIENP 79 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G T N+ Sbjct: 80 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFT-------------------NQL 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+EA IP +A Sbjct: 121 QTSFSE--------------------------PRLLILTDPRTDHQPIKEAALGNIPTIA 154 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S + VD IP N+ SI L+A Sbjct: 155 FCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLA 187 >gi|146304887|ref|YP_001192203.1| 30S ribosomal protein S2 [Metallosphaera sedula DSM 5348] gi|172046961|sp|A4YIM7|RS2_METS5 RecName: Full=30S ribosomal protein S2P gi|145703137|gb|ABP96279.1| SSU ribosomal protein S2P [Metallosphaera sedula DSM 5348] Length = 225 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G MER+I+ R +++D+ + L+ A + +S + IL Sbjct: 37 LSAGVHIGTHT--CTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFLSRFQPQS--IL 92 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA++ A V + A+ V + + GM+TN L D E Sbjct: 93 AVASRPYAFTPVQKFAEVVGARAVVGRMVPGMLTN--------PYLEDFIE--------- 135 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 P+++ V D + AI+EA + IP+VA DT Sbjct: 136 ----------------------------PEVLLVSDPRTDTQAIKEAADMGIPVVAFSDT 167 Query: 191 NSNPDLVDYVIPGNDDSSRSIALF 214 ++ D VD VIP N+ +S+AL Sbjct: 168 DAKVDYVDLVIPSNNKGRKSLALL 191 >gi|169848048|ref|XP_001830732.1| 40S ribosomal protein S0 [Coprinopsis cinerea okayama7#130] gi|229891584|sp|A8N7C6|RSSA_COPC7 RecName: Full=40S ribosomal protein S0 gi|116508206|gb|EAU91101.1| 40S ribosomal protein S0 [Coprinopsis cinerea okayama7#130] Length = 295 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +ME Y++ R + HI+++ +T L A ++I+ V Sbjct: 16 IQLLLAAQCHIGTKNC--DKQMEPYVWKRRADGIHILNIGKTWEKLVLAARIIA-AVENP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 73 NDICVISARPYGHRAVLKFAANTGAQAIAGRFTPGSFTNYIT--------RSFKE----- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRIIIVTDPRVDHQAIREASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT++ VD IP N+ + SI L L+A Sbjct: 148 LCDTDAPLQFVDVAIPTNNKTRHSIGLIWWLLA 180 >gi|210075142|ref|XP_500192.2| YALI0A18205p [Yarrowia lipolytica] gi|229891757|sp|Q6CGM0|RSSA_YARLI RecName: Full=40S ribosomal protein S0 gi|199424897|emb|CAG84124.2| YALI0A18205p [Yarrowia lipolytica] Length = 270 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + Y+F +R + +II++ +T +Q A ++I+ V Sbjct: 13 IQNLLAAQTHIGSKNV--QVQNIPYVFKQRADGVNIINVGKTWEKIQLAARIIA-AVPNP 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ ++ V++ A + ++ G TN+ T R +E Sbjct: 70 ADVVAISARTYGQRAVLKFANHCGATAIAGRFTPGSFTNYIT--------RSFKE----- 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 117 --------------------------------PRLLIVTDPRTDHQAIKEASYVNIPVIA 144 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +VDT+S + VD IP N+ S+ L +++ Sbjct: 145 LVDTDSPVEFVDVAIPCNNKGRHSVGLVWWMIS 177 >gi|67525429|ref|XP_660776.1| hypothetical protein AN3172.2 [Aspergillus nidulans FGSC A4] gi|40744567|gb|EAA63743.1| hypothetical protein AN3172.2 [Aspergillus nidulans FGSC A4] Length = 280 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S D VD IP N+ +I L L+ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|315115409|gb|ADT80677.1| ribosomal protein SA [Euphydryas aurinia] Length = 306 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLGSENV--NFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Q R+ Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTN-----QIQAAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V+D ++ I EA Sbjct: 119 ---------------------------------------PRLLIVLDPAQDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S VD IP N SS SI L L+A Sbjct: 140 VNIPVIAFCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 179 >gi|114151586|ref|YP_740354.1| ribosomal protein S2 [Zea perennis] gi|102567920|gb|ABF70837.1| ribosomal protein S2 [Zea perennis] Length = 533 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 38/186 (20%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 YI C RN I+D +T+ L+ AL + + + R F+ TK+ +M AK + Sbjct: 30 YIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRSFFLKTKNLFIYSIM--AKMWS- 86 Query: 92 YCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 C+N S+W +G +TN N ++ R + K+ Sbjct: 87 -CINDSQWKIGAFLTN----------------------------SYANPKKFRSRNKKIY 117 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD-TNSNPDLVDYVIPGNDDSS 208 G+ PD + ++ +R+ I EA R +IPI +VD T + + IP ND Sbjct: 118 FGLNRQ---PDCVVILHPDRKSSVILEADRSQIPIAYLVDSTIPSHKRFTFTIPANDPLR 174 Query: 209 RSIALF 214 + LF Sbjct: 175 LLVYLF 180 >gi|255938175|ref|XP_002559858.1| Pc13g14510 [Penicillium chrysogenum Wisconsin 54-1255] gi|269969657|sp|B6H2I7|RSSA_PENCW RecName: Full=40S ribosomal protein S0 gi|211584478|emb|CAP92520.1| Pc13g14510 [Penicillium chrysogenum Wisconsin 54-1255] Length = 303 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S D VD IP N+ +I L ++ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|58271524|ref|XP_572918.1| 40S ribosomal protein S0 [Cryptococcus neoformans var. neoformans JEC21] gi|134115328|ref|XP_773962.1| hypothetical protein CNBH4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|74683134|sp|Q5KAZ6|RSSA_CRYNE RecName: Full=40S ribosomal protein S0 gi|50256590|gb|EAL19315.1| hypothetical protein CNBH4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229177|gb|AAW45611.1| 40S ribosomal protein S0, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 292 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 49/212 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + ME Y++ R + H+I++ +T L A +V++ T+ Sbjct: 17 IQLLLAAQCHLGTKNC--DKSMENYVWKRRADGIHVINVGKTWEKLVLAARVLA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ + + ++ G TN+ T R +E Sbjct: 74 NDVCVISARPYGHRAVLKYGSFTGAQAIAGRFTPGSFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRVIIVTDPRVDHQAIREAAYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 DT+++ VD IP N+ S SI L L+ Sbjct: 149 FCDTDASTKFVDIAIPANNKSRHSIGLMWYLL 180 >gi|194912510|ref|XP_001982520.1| sta [Drosophila erecta] gi|229891599|sp|B3P9J3|RSSA_DROER RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|190648196|gb|EDV45489.1| sta [Drosophila erecta] Length = 270 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 179 >gi|150401188|ref|YP_001324954.1| 30S ribosomal protein S2 [Methanococcus aeolicus Nankai-3] gi|209573659|sp|A6UV20|RS2_META3 RecName: Full=30S ribosomal protein S2P gi|150013891|gb|ABR56342.1| ribosomal protein S2 [Methanococcus aeolicus Nankai-3] Length = 220 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + IPIV + DT +D++IP N+ +S++L L+ Sbjct: 113 PEVLFLSDPRIDRQALKEAIEIGIPIVGMCDTEHLTSFIDFIIPTNNKGRKSVSLVYYLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|17136518|ref|NP_476750.1| stubarista, isoform A [Drosophila melanogaster] gi|24639112|ref|NP_726744.1| stubarista, isoform B [Drosophila melanogaster] gi|195347652|ref|XP_002040366.1| GM18969 [Drosophila sechellia] gi|195469755|ref|XP_002099802.1| sta [Drosophila yakuba] gi|122091662|sp|Q0H6L1|RSSA_DROSI RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|122114899|sp|Q0H6L0|RSSA_DROTE RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891615|sp|B4I9F6|RSSA_DROSE RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891618|sp|B4PY37|RSSA_DROYA RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|158031|gb|AAA28741.1| p40 [Drosophila melanogaster] gi|3292889|emb|CAA19839.1| EG:80H7.6 [Drosophila melanogaster] gi|21430162|gb|AAM50759.1| LD09376p [Drosophila melanogaster] gi|22831494|gb|AAF45638.2| stubarista, isoform A [Drosophila melanogaster] gi|22831495|gb|AAN09049.1| stubarista, isoform B [Drosophila melanogaster] gi|77682747|gb|ABB00655.1| stubarista [Drosophila simulans] gi|77682749|gb|ABB00656.1| stubarista [Drosophila teissieri] gi|115646347|gb|ABJ17027.1| IP12946p [Drosophila melanogaster] gi|194121794|gb|EDW43837.1| GM18969 [Drosophila sechellia] gi|194187326|gb|EDX00910.1| sta [Drosophila yakuba] Length = 270 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 179 >gi|225442018|ref|XP_002268664.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|229891614|sp|A5BUU4|RSSA_VITVI RecName: Full=40S ribosomal protein SA gi|147782664|emb|CAN61790.1| hypothetical protein VITISV_015795 [Vitis vinifera] Length = 312 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F RN+ +II+L +T LQ A +VI + Sbjct: 15 IQMMLAAEVHLGTKNC--NFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G T N+ Sbjct: 72 KDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFT-------------------NQL 112 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+EA IP +A Sbjct: 113 QTSFSE--------------------------PRLLILTDPRTDHQPIKEAALGNIPTIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 147 FCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 179 >gi|114151618|ref|YP_740437.1| ribosomal protein S2 [Zea luxurians] gi|110287614|gb|ABG65660.1| ribosomal protein S2 [Zea luxurians] Length = 530 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 38/186 (20%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 YI C RN I+D +T+ L+ AL + + + R F+ TK+ +M AK + Sbjct: 30 YIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRSFFLKTKNLFIYSIM--AKMWS- 86 Query: 92 YCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 C+N S+W +G +TN N ++ R + K+ Sbjct: 87 -CINDSQWKIGAFLTN----------------------------SYANPKKFRSRNKKIY 117 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD-TNSNPDLVDYVIPGNDDSS 208 G+ PD + ++ +R+ I EA R +IPI +VD T + + IP ND Sbjct: 118 FGLNRQ---PDCVVILHPDRKSSVILEADRSQIPIAYLVDSTIPSHKRFTFTIPANDPLR 174 Query: 209 RSIALF 214 + LF Sbjct: 175 LLVYLF 180 >gi|297527607|ref|YP_003669631.1| ribosomal protein S2 [Staphylothermus hellenicus DSM 12710] gi|297256523|gb|ADI32732.1| ribosomal protein S2 [Staphylothermus hellenicus DSM 12710] Length = 219 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 39/61 (63%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ + D + A++EA + IPIV++ DT++ + +D +IP N+ +S+AL L+ Sbjct: 130 PDIVLLTDPRADSQALKEAAEIGIPIVSLADTDNRTEYIDLIIPANNKGRKSLALIYWLL 189 Query: 219 A 219 A Sbjct: 190 A 190 >gi|312378068|gb|EFR24739.1| hypothetical protein AND_10459 [Anopheles darlingi] Length = 368 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 47/195 (24%) Query: 26 NPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 N +ME+Y++ R + HII+L +T L A + I+ ++ G I ++++ V++ Sbjct: 31 NFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCIA-SIEHPGEIYAISSRPYGQRAVLK 89 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 A + + ++ G TN Q R+ Sbjct: 90 YAHYTEATPIAGRFTPGAFTN-----QIQTAFRE-------------------------- 118 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 P L+ V D + + EA + IP++A +T+S VD IP N Sbjct: 119 --------------PRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCN 164 Query: 205 DDSSRSIALFCDLVA 219 S+ SI L L+A Sbjct: 165 TKSTHSIGLMWWLLA 179 >gi|150400263|ref|YP_001324030.1| 30S ribosomal protein S2 [Methanococcus vannielii SB] gi|209573670|sp|A6USE6|RS2_METVS RecName: Full=30S ribosomal protein S2P gi|150012966|gb|ABR55418.1| ribosomal protein S2 [Methanococcus vannielii SB] Length = 221 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 39/61 (63%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P++MF+ D +K A++EA + IPIV++ DT +D++IP N+ +S++L L+ Sbjct: 113 PEVMFLSDPRVDKQALKEAIEIGIPIVSMCDTEHLTAHLDFIIPTNNKGRKSVSLMYFLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|70999137|ref|XP_754290.1| 40S ribosomal protein S0 [Aspergillus fumigatus Af293] gi|74674582|sp|Q4WYK1|RSSA_ASPFU RecName: Full=40S ribosomal protein S0 gi|229891579|sp|B0XWG9|RSSA_ASPFC RecName: Full=40S ribosomal protein S0 gi|66851927|gb|EAL92252.1| 40S ribosomal protein S0 [Aspergillus fumigatus Af293] gi|159127307|gb|EDP52422.1| 40S ribosomal protein S0 [Aspergillus fumigatus A1163] Length = 297 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|310795693|gb|EFQ31154.1| ribosomal protein S2 [Glomerella graminicola M1.001] Length = 294 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N ME Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEMLLAAQAHLGSKNL--QVHMEPYLWKTRADGVNVINVGKTWEKIVLAARIIA-AVDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ SI L ++A Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHSIGLIWWMLA 181 >gi|221123853|ref|XP_002156320.1| PREDICTED: similar to ribosomal protein SA [Hydra magnipapillata] Length = 293 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 ++L Q + + L +GV G N + Y+F +++ HII+L +T L A ++I Sbjct: 8 LSLKQEDVVKFLAAGVHLGSTNVA--SSCQGYVFKRKSDGIHIINLRKTWEKLILAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ G + ++++ + V++ A+ + V ++ G TN IQK Sbjct: 66 A-SIEHPGDVCVISSRPYGTRAVLKFAQNTGAIAVAGRFTPGTFTN------QIQK---- 114 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 R+ P L+ D + A+ EA Sbjct: 115 -------------------------------AFRE----PRLLISTDPQHDNQALTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IPI+A+ +T+S VD IP N+ +SI ++A Sbjct: 140 VNIPIIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWMLA 179 >gi|119490951|ref|XP_001263136.1| 40S ribosomal protein S0 [Neosartorya fischeri NRRL 181] gi|229891595|sp|A1D695|RSSA_NEOFI RecName: Full=40S ribosomal protein S0 gi|119411296|gb|EAW21239.1| 40S ribosomal protein S0 [Neosartorya fischeri NRRL 181] Length = 297 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|305662639|ref|YP_003858927.1| SSU ribosomal protein S2P [Ignisphaera aggregans DSM 17230] gi|304377208|gb|ADM27047.1| SSU ribosomal protein S2P [Ignisphaera aggregans DSM 17230] Length = 209 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 50/209 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L++GV G MER++F R + +I+D+ +T L+ A + +S +I+ Sbjct: 23 LQAGVHIGTHT--CTKHMERFVFRVRPDGLYILDVRKTDERLRVAGKFLSRY--EPTKIM 78 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 +AT+ V + A+ V +++ G +TN K LE Sbjct: 79 VIATRQYGKQPVQKFAEFVGAKPVTGRFIPGTLTNPK-----------LEWYYE------ 121 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 PD++ + D + ++EA + IP+VA V T Sbjct: 122 ----------------------------PDVIIITDPRIDSQPLREALMVGIPVVAFVST 153 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 ++ + VD IPGN+ +S+AL ++A Sbjct: 154 DNKLEGVDLAIPGNNKGRKSLALLYWILA 182 >gi|255522992|gb|ACU12388.1| RE42047p [Drosophila melanogaster] Length = 313 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 51 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 108 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 109 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 161 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 162 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 183 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 222 >gi|126465720|ref|YP_001040829.1| 30S ribosomal protein S2 [Staphylothermus marinus F1] gi|209573681|sp|A3DMR1|RS2_STAMF RecName: Full=30S ribosomal protein S2P gi|126014543|gb|ABN69921.1| SSU ribosomal protein S2P [Staphylothermus marinus F1] Length = 220 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 39/61 (63%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ + D + A++EA + IPIV++ DT++ + +D +IP N+ +S+AL L+ Sbjct: 131 PDIVLLTDPRADSQALKEAAEIGIPIVSLADTDNRTEYIDLIIPANNKGRKSLALIYWLL 190 Query: 219 A 219 A Sbjct: 191 A 191 >gi|8574649|gb|AAF77640.1|AF193906_1 mitochondrial protein [Zamia integrifolia] Length = 147 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 30/158 (18%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNS-KW-LGGMMTNWKTVSQS 112 A I + + GR L V T S + + + A + + C+N +W +GG +T+ ++ Sbjct: 1 ACHSIGSPIRKKGRSLPVNTNSLFDEIIEQMATKIDRSCINDYQWRIGGFLTDSSSMHLF 60 Query: 113 IQKLRDLEELLNKENQGFTK--KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 +K+R F++ K+++N+ +R PD + +++ +RE Sbjct: 61 PKKIR------------FSRPGKKKINLFGGSGSNQR-----------PDRVVIMNADRE 97 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDL---VDYVIPGND 205 I A RL+IPIV++VD+N L + Y IP ND Sbjct: 98 SSVILGADRLQIPIVSLVDSNIPLGLCKGITYPIPAND 135 >gi|297619439|ref|YP_003707544.1| 30S ribosomal protein S2 [Methanococcus voltae A3] gi|297378416|gb|ADI36571.1| ribosomal protein S2 [Methanococcus voltae A3] Length = 218 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D +K A++EA + IPIV + DT +D++IP N+ +S++L L+ Sbjct: 113 PEVLFLSDPRVDKQALKEAIEIGIPIVGMCDTEHLTSHIDFIIPTNNKGRKSVSLMYYLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|330834014|ref|YP_004408742.1| 30S ribosomal protein S2 [Metallosphaera cuprina Ar-4] gi|329566153|gb|AEB94258.1| 30S ribosomal protein S2 [Metallosphaera cuprina Ar-4] Length = 225 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 50/204 (24%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G MER+I+ R +++D+ + L+ A + +S + IL Sbjct: 37 LSAGVHIGTHT--CTRYMERFIYRVRPEGLYVLDVRKIDERLRIAAKFLSRFQPQS--IL 92 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA++ A V + A+ V + + GM+TN L D E Sbjct: 93 AVASRPYAFTPVQKFAEVVGARSVVGRMIPGMLTN--------PYLEDFIE--------- 135 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 P+++ V D + AI+EA + IP+VA DT Sbjct: 136 ----------------------------PEVLLVSDPRTDVQAIKEAADMGIPVVAFSDT 167 Query: 191 NSNPDLVDYVIPGNDDSSRSIALF 214 ++ D VD +IP N+ +S+AL Sbjct: 168 DAKVDYVDLIIPSNNKGRKSLALL 191 >gi|195060376|ref|XP_001995792.1| GH17574 [Drosophila grimshawi] gi|229891600|sp|B4JXG8|RSSA_DROGR RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|193896578|gb|EDV95444.1| GH17574 [Drosophila grimshawi] Length = 272 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y+F R + +II+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLA 179 >gi|195133874|ref|XP_002011364.1| GI16040 [Drosophila mojavensis] gi|195399450|ref|XP_002058333.1| GJ15549 [Drosophila virilis] gi|229891601|sp|B4L760|RSSA_DROMO RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891616|sp|B4MB32|RSSA_DROVI RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|193907339|gb|EDW06206.1| GI16040 [Drosophila mojavensis] gi|194150757|gb|EDW66441.1| GJ15549 [Drosophila virilis] Length = 271 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y+F R + +II+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLA 179 >gi|126179753|ref|YP_001047718.1| 30S ribosomal protein S2 [Methanoculleus marisnigri JR1] gi|209573666|sp|A3CWI6|RS2_METMJ RecName: Full=30S ribosomal protein S2P gi|125862547|gb|ABN57736.1| SSU ribosomal protein S2P [Methanoculleus marisnigri JR1] Length = 205 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 47/216 (21%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDT 62 P + + L +GV G + + M ++I+ R + +I+D+ T ++ A + +S Sbjct: 13 PLLPVEEYLAAGVHIGTQQ--KSKDMMKFIYRVRGDGLYILDIQATDERIKTAAKFLSQ- 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +IL V ++ + A V +++ GM+TN Q+L L + Sbjct: 70 -YEPSKILVVTSRQYGQYPAKKFADAIGGMAVVGRFIPGMLTN--------QRLHGLNKY 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + PD++ V D + I EA ++ I Sbjct: 121 IE----------------------------------PDVVVVTDPIGDSQTIAEAVQVGI 146 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PIVA+ DTN+ VD VIP N+ +++++ L+ Sbjct: 147 PIVALCDTNNMTKYVDVVIPTNNKGRKALSVIYYLL 182 >gi|45551198|ref|NP_726745.2| stubarista, isoform D [Drosophila melanogaster] gi|150421662|sp|P38979|RSSA_DROME RecName: Full=40S ribosomal protein SA; AltName: Full=K14; AltName: Full=Laminin receptor homolog; AltName: Full=Protein stubarista gi|45446772|gb|AAN09050.2| stubarista, isoform D [Drosophila melanogaster] Length = 313 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 51 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 108 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 109 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 161 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 162 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 183 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 222 >gi|116199947|ref|XP_001225785.1| 40S ribosomal protein S0 [Chaetomium globosum CBS 148.51] gi|121937800|sp|Q2GV75|RSSA_CHAGB RecName: Full=40S ribosomal protein S0 gi|88179408|gb|EAQ86876.1| 40S ribosomal protein S0 [Chaetomium globosum CBS 148.51] Length = 293 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 85/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N N M+ Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHVGSKNLGVN--MQPYLWKTRADGVNVINIGKTWEKITLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 SDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ SI L ++A Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLA 181 >gi|327401472|ref|YP_004342311.1| 30S ribosomal protein S2 [Archaeoglobus veneficus SNP6] gi|327316980|gb|AEA47596.1| ribosomal protein S2 [Archaeoglobus veneficus SNP6] Length = 205 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 54/213 (25%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR--G 66 + L +GV G + + M ++I+ R + +++D+ Q L + +++ ++R Sbjct: 21 EYLAAGVHIGTQ--VKTGDMRKFIYKVRPDGLYVLDIRQ----LDERIKIAGKFLSRFEP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +IL VA + AK C+ +++ G +TN LR+ E Sbjct: 75 AKILVVAARQYGQKPAKMFAKVVGADCIVGRFVPGTLTN--------PMLREYRE----- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A+QEA + IP+VA Sbjct: 122 --------------------------------PDVVIVTDPAIDSQAVQEATDIGIPVVA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + D+N++ VD VIP N+ +++AL L+A Sbjct: 150 LCDSNNSAANVDLVIPTNNKGRKALALVYWLLA 182 >gi|227547147|ref|ZP_03977196.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212368|gb|EEI80264.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 45 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 28/40 (70%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHI 42 + Q T+ +L++G+ FGH+ WNPKM+++I +RN H+ Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHV 40 >gi|302412989|ref|XP_003004327.1| 40S ribosomal protein S0 [Verticillium albo-atrum VaMs.102] gi|261356903|gb|EEY19331.1| 40S ribosomal protein S0 [Verticillium albo-atrum VaMs.102] Length = 288 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ SI L ++ Sbjct: 121 PRLIIVTDPRTDAQAIREASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|119186907|ref|XP_001244060.1| conserved hypothetical protein [Coccidioides immitis RS] gi|303317428|ref|XP_003068716.1| 40S ribosomal protein S0, putative [Coccidioides posadasii C735 delta SOWgp] gi|121937249|sp|Q1E1R2|RSSA_COCIM RecName: Full=40S ribosomal protein S0 gi|269969648|sp|C5PA09|RSSA_COCP7 RecName: Full=40S ribosomal protein S0 gi|240108397|gb|EER26571.1| 40S ribosomal protein S0, putative [Coccidioides posadasii C735 delta SOWgp] gi|320038679|gb|EFW20614.1| 40S ribosomal protein S0 [Coccidioides posadasii str. Silveira] Length = 291 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L L+ Sbjct: 121 PRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|12249037|dbj|BAB20388.1| stubarista [Drosophila erecta] Length = 241 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I + Sbjct: 15 ITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIV-AIDNP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 72 SDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D N + I EA + IP++A Sbjct: 119 --------------------------------PRLLVVTDPNTDHQPIMEASYVNIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +T+S +D IP N+ S+ SI L L+A Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 179 >gi|17298117|dbj|BAB78527.1| ribosome-associated protein P40 [Bombyx mori] Length = 312 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N N ++E Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLGAENV--NFQVETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN IQ Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTN------QIQA---- 114 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 R+ P L+ V+D ++ I EA Sbjct: 115 -------------------------------AFRE----PRLLIVLDPAQDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A+ +T+S VD IP N SS SI L L+A Sbjct: 140 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 179 >gi|38048381|gb|AAR10093.1| similar to Drosophila melanogaster sta [Drosophila yakuba] Length = 209 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 22 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 79 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 80 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 132 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 133 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 153 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 154 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 193 >gi|3914935|sp|O65751|RSSA_CICAR RecName: Full=40S ribosomal protein SA; AltName: Full=p40 gi|3204099|emb|CAA07226.1| ribosome-associated protein p40 [Cicer arietinum] Length = 300 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERYIF RN+ +II+L +T L A ++I + Sbjct: 18 IQMMLAADVHLGTKNC--NFQMERYIFKRRNDGIYIINLGKTWDKLNLAARIIV-AIENS 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G T N+ Sbjct: 75 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFT-------------------NQL 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+EA IP +A Sbjct: 116 QTSFSE--------------------------PRLLILTDPRTDHQPIKEAALGNIPTIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S + VD IP N+ SI L+A Sbjct: 150 FCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLA 182 >gi|325969094|ref|YP_004245286.1| 30S ribosomal protein S2 [Vulcanisaeta moutnovskia 768-28] gi|323708297|gb|ADY01784.1| 30S ribosomal protein S2 [Vulcanisaeta moutnovskia 768-28] Length = 225 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 37/60 (61%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+ D + AI+EA + IP++A+VDT++ VD +IP N+ RS+AL L+A Sbjct: 132 DLLISTDPKADAQAIEEAATMGIPVIALVDTDTPISYVDLIIPCNNKGRRSLALVYWLLA 191 >gi|12249039|dbj|BAB20389.1| stubarista [Drosophila orena] Length = 238 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D N + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 179 >gi|326504366|dbj|BAJ91015.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 281 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 34/60 (56%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S VD IP N+ S S+ L L+ Sbjct: 121 PRLIIVTDPRVDHQAIREASYVNIPVIAIADTDSPLSYVDVAIPANNKSKHSVGLIWWLL 180 >gi|79321150|ref|NP_001031267.1| P40; structural constituent of ribosome [Arabidopsis thaliana] gi|222423427|dbj|BAH19684.1| AT1G72370 [Arabidopsis thaliana] gi|332197193|gb|AEE35314.1| 40S ribosomal protein Sa-1 [Arabidopsis thaliana] Length = 294 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 80/213 (37%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 +R + + V G +N N +MERY+F RN+ +I +L +T LQ A +VI + Sbjct: 19 VRMMCAAEVHLGTKNC--NYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV-AIENP 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S Sbjct: 76 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS---------------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+E IPI+A Sbjct: 120 ---FSE--------------------------PRLLILTDPRTDHQPIKEGALGNIPIIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 151 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLA 183 >gi|208657595|gb|ACI30094.1| 40S ribosomal protein [Anopheles darlingi] Length = 288 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G + N +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDVTKMLAATTHIGSTSV--NFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ G I ++++ V++ A + + ++ G TN Q R+ Sbjct: 66 A-SIEHPGEIYAISSRPYGQRAVLKYAHYTEATPIAGRFTPGAFTN-----QIQTAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + + EA Sbjct: 119 ---------------------------------------PRLLIVTDPLTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S VD IP N S+ SI L L+A Sbjct: 140 VNIPVIAFCNTDSPLKFVDIAIPCNTKSTHSIGLMWWLLA 179 >gi|302830943|ref|XP_002947037.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] gi|300267444|gb|EFJ51627.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] Length = 280 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 63/225 (28%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + G +N + +MERY++ R + +II+L +T LQ A +VI Sbjct: 10 IQMMLAAQCHLGTKNCHY--QMERYMYRRRQDGIYIINLEKTYEKLQMAARVI------- 60 Query: 67 GRILFVATKSQASDCVMEAAK-------RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 VA ++ CV+ A + AQY + K + G T T + IQK Sbjct: 61 -----VAIENPQDICVLSARPYGQRAVFKFAQY-LGCKSMAGRHTP-GTFTNQIQKA--F 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 EE P L+ + D + ++E+ Sbjct: 112 EE-------------------------------------PRLLILTDPRTDHQPVKESSY 134 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP +A DT+S VD IP N+ SI + L+A ++ Sbjct: 135 MNIPTIAFCDTDSPLTYVDVAIPANNKGKHSIGVLYWLLARMVLE 179 >gi|16380|emb|CAA48794.1| laminin receptor homologue [Arabidopsis thaliana] Length = 298 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 80/213 (37%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 +R + + V G +N N +MERY+F RN+ +I +L +T LQ A +VI + Sbjct: 19 VRMMCAAEVHLGTKNC--NYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV-AIENP 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S Sbjct: 76 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS---------------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+E IPI+A Sbjct: 120 ---FSE--------------------------PRLLILTDPRTDHQPIKEGALGNIPIIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 151 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLA 183 >gi|240278980|gb|EER42486.1| 40S ribosomal protein S0 [Ajellomyces capsulatus H143] Length = 267 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L ++ Sbjct: 92 PRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWML 151 Query: 219 A 219 A Sbjct: 152 A 152 >gi|212526852|ref|XP_002143583.1| 40S ribosomal protein S0 [Penicillium marneffei ATCC 18224] gi|269969658|sp|B6Q3G2|RSSA_PENMQ RecName: Full=40S ribosomal protein S0 gi|210072981|gb|EEA27068.1| 40S ribosomal protein S0 [Penicillium marneffei ATCC 18224] Length = 290 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|242781968|ref|XP_002479907.1| 40S ribosomal protein S0 [Talaromyces stipitatus ATCC 10500] gi|269969662|sp|B8M6L1|RSSA_TALSN RecName: Full=40S ribosomal protein S0 gi|218720054|gb|EED19473.1| 40S ribosomal protein S0 [Talaromyces stipitatus ATCC 10500] Length = 290 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|15218458|ref|NP_177381.1| P40; structural constituent of ribosome [Arabidopsis thaliana] gi|73920779|sp|Q08682|RSSA1_ARATH RecName: Full=40S ribosomal protein Sa-1; AltName: Full=Laminin receptor homolog; AltName: Full=p40 gi|12325280|gb|AAG52587.1|AC016529_18 putative 40S ribosomal protein SA (laminin receptor-like protein); 68387-70081 [Arabidopsis thaliana] gi|402904|gb|AAA53425.1| laminin receptor-like protein [Arabidopsis thaliana] gi|15809888|gb|AAL06872.1| At1g72370/T10D10_16 [Arabidopsis thaliana] gi|16604531|gb|AAL24271.1| At1g72370/T10D10_16 [Arabidopsis thaliana] gi|17473615|gb|AAL38272.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|18958036|gb|AAL79591.1| At1g72370/T10D10_16 [Arabidopsis thaliana] gi|21386953|gb|AAM47880.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|21593556|gb|AAM65523.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|22530972|gb|AAM96990.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|23198426|gb|AAN15740.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|332197192|gb|AEE35313.1| 40S ribosomal protein Sa-1 [Arabidopsis thaliana] Length = 298 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 80/213 (37%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 +R + + V G +N N +MERY+F RN+ +I +L +T LQ A +VI + Sbjct: 19 VRMMCAAEVHLGTKNC--NYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV-AIENP 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S Sbjct: 76 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS---------------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+E IPI+A Sbjct: 120 ---FSE--------------------------PRLLILTDPRTDHQPIKEGALGNIPIIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 151 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLA 183 >gi|3334320|sp|O22518|RSSA_SOYBN RecName: Full=40S ribosomal protein SA; AltName: Full=p40 gi|2444420|gb|AAB82659.1| ribosome-associated protein p40 [Glycine max] Length = 310 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERYIF RN+ +II+L +T LQ A +VI + Sbjct: 22 IQMMLAADVHLGTKNC--DFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIV-AIENP 78 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G T N+ Sbjct: 79 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFT-------------------NQL 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+EA IP +A Sbjct: 120 QTSFSE--------------------------PRLLILTDPRTDHQPIKEAALGNIPTIA 153 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 154 FCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186 >gi|269969623|sp|C0NKW7|RSSA_AJECG RecName: Full=40S ribosomal protein S0 gi|225560226|gb|EEH08508.1| 40S ribosomal protein S0 [Ajellomyces capsulatus G186AR] Length = 296 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N ME Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEMLLAAQCHLGSKNL--QVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AVDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDHQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ +I L ++A Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLA 181 >gi|12249035|dbj|BAB20387.1| stubarista [Drosophila yakuba] Length = 239 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I + Sbjct: 15 ITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIV-AIDNP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 72 SDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D N + I EA + IP++A Sbjct: 119 --------------------------------PRLLVVTDPNTDHQPIMEASYVNIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +T+S +D IP N+ S+ SI L L+A Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 179 >gi|171690138|ref|XP_001909994.1| hypothetical protein [Podospora anserina S mat+] gi|229891608|sp|B2B1Z3|RSSA_PODAN RecName: Full=40S ribosomal protein S0 gi|170945017|emb|CAP71128.1| unnamed protein product [Podospora anserina S mat+] Length = 291 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ SI L ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|124027420|ref|YP_001012740.1| 30S ribosomal protein S2 [Hyperthermus butylicus DSM 5456] gi|209573655|sp|A2BK84|RS2_HYPBU RecName: Full=30S ribosomal protein S2P gi|123978114|gb|ABM80395.1| 30S ribosomal protein S2P [Hyperthermus butylicus DSM 5456] Length = 216 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 PD++ V D + A+ EA R+ IP+VA+ DT++ + +D VIP N+ +S+AL Sbjct: 126 PDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNRVENIDLVIPVNNKGRKSLAL 180 >gi|297833174|ref|XP_002884469.1| hypothetical protein ARALYDRAFT_477746 [Arabidopsis lyrata subsp. lyrata] gi|297330309|gb|EFH60728.1| hypothetical protein ARALYDRAFT_477746 [Arabidopsis lyrata subsp. lyrata] Length = 318 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F RN+ +II+L +T LQ A +VI + Sbjct: 20 IQMMLSADVHLGTKNC--NYQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S Sbjct: 77 KDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTS---------------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+E IP +A Sbjct: 121 ---FSE--------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLA 184 >gi|307594860|ref|YP_003901177.1| 30S ribosomal protein S2 [Vulcanisaeta distributa DSM 14429] gi|307550061|gb|ADN50126.1| ribosomal protein S2 [Vulcanisaeta distributa DSM 14429] Length = 225 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 37/60 (61%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DL+ D + AI+EA + IP++A+VDT++ VD +IP N+ RS+AL L+A Sbjct: 132 DLLISTDPKADVQAIEEAATMGIPVIALVDTDTPISYVDLIIPCNNKGRRSLALIYWLLA 191 >gi|1345503|emb|CAA61547.1| 40kD protein [Arabidopsis thaliana] gi|2102657|emb|CAA71407.1| unnamed protein product [Arabidopsis thaliana] Length = 298 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 +R + + V G +N N +MERY+F RN+ +I +L +T LQ A +VI Sbjct: 19 VRMMCAAEVHLGTKNC--NYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVI------- 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 VA ++ D ++++A+ Q V + T + +I N+ Sbjct: 70 -----VAIEN-PQDIIVQSARPYGQRAV-------LKFAQYTGANAIAGRHTPGTFTNQM 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+E IPI+A Sbjct: 117 QTSFSE--------------------------PRLLILTDPRTDHQPIKEGALGNIPIIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 151 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLA 183 >gi|258563562|ref|XP_002582526.1| 40S ribosomal protein S0 [Uncinocarpus reesii 1704] gi|269969663|sp|C4JYP8|RSSA_UNCRE RecName: Full=40S ribosomal protein S0 gi|237908033|gb|EEP82434.1| 40S ribosomal protein S0 [Uncinocarpus reesii 1704] Length = 297 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHAIGLVWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|326632108|gb|ADZ99056.1| ribosomal protein S2 [Physarum polycephalum] Length = 470 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 20/227 (8%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I RN+ HI++++ T+ ++KAL I V G A +A Sbjct: 39 MNSFILAIRNDIHILNITYTIIQIRKALNTIFHKVRYRGSFTIYAQAFKALKI-----NH 93 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQ----KLRDLEELLNKENQGFTKKERLNIERKRDK 144 + + + W+ G++TN+K V+++I+ L L + N K Sbjct: 94 GSIFSFITDWVPGLLTNYKRVTRAIRAYKLHLARTAYFLKRPQLKAIAHSYFNPIPKSSL 153 Query: 145 LKRALDGIRDMGGLPDL----MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 KR R +P + ++D+N + + E LRIP + + D S + V Y Sbjct: 154 FKRR----RRTPQIPKFPAISLSILDSN---VWLHECLCLRIPSIQICDNQSQFEKVTYP 206 Query: 201 IPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 I N S L L A + + H + K+ G V S Sbjct: 207 IISNQRSMAFSHLIVYLAAEVSNTSLFSSHLDFLSFYKNRGPKVFAS 253 >gi|321262430|ref|XP_003195934.1| 40S ribosomal protein S0 [Cryptococcus gattii WM276] gi|317462408|gb|ADV24147.1| 40S ribosomal protein S0, putative [Cryptococcus gattii WM276] Length = 292 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 49/212 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + ME Y++ R + H+I++ +T L A +V++ T+ Sbjct: 17 IQLLLAAQCHLGTKNC--DKTMENYVWKRRADGIHVINVGKTWEKLVLAARVLA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ + + ++ G TN+ T R +E Sbjct: 74 NDVCVISARPYGHRAVLKYGSFTGAQAIAGRFTPGSFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRVIIVTDPRVDHQAIREAAYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 DT+++ VD IP N+ S S+ L L+ Sbjct: 149 FCDTDASTKFVDIAIPTNNKSRHSVGLMWYLL 180 >gi|325090239|gb|EGC43549.1| 40S ribosomal protein S0 [Ajellomyces capsulatus H88] Length = 296 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L ++ Sbjct: 121 PRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|40889982|pdb|1VI6|A Chain A, Crystal Structure Of Ribosomal Protein S2p gi|40889983|pdb|1VI6|B Chain B, Crystal Structure Of Ribosomal Protein S2p gi|40889984|pdb|1VI6|C Chain C, Crystal Structure Of Ribosomal Protein S2p gi|40889985|pdb|1VI6|D Chain D, Crystal Structure Of Ribosomal Protein S2p Length = 208 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 40/61 (65%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++FV D +K A+ EA + IP+VA+ D+N++ VD VIP N+ R++A+ L+ Sbjct: 116 PEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNNSSADVDLVIPTNNKGRRALAIVYWLL 175 Query: 219 A 219 A Sbjct: 176 A 176 >gi|38047861|gb|AAR09833.1| similar to Drosophila melanogaster sta [Drosophila yakuba] Length = 193 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I + Sbjct: 4 ITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIV-AIDNP 60 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++++ V++ AK + + ++ G TN Q R+ Sbjct: 61 SDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE-------- 107 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D N + I EA + IP++A Sbjct: 108 --------------------------------PRLLVVTDPNTDHQPIMEASYVNIPVIA 135 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +T+S +D IP N+ S+ SI L L+A Sbjct: 136 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 168 >gi|195162173|ref|XP_002021930.1| GL14373 [Drosophila persimilis] gi|198470906|ref|XP_001355430.2| GA13249 [Drosophila pseudoobscura pseudoobscura] gi|229891602|sp|B4GTK1|RSSA_DROPE RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891759|sp|Q29J14|RSSA_DROPS RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|194103828|gb|EDW25871.1| GL14373 [Drosophila persimilis] gi|198145676|gb|EAL32488.2| GA13249 [Drosophila pseudoobscura pseudoobscura] Length = 270 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 87/220 (39%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +II+L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPMTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S+ SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 179 >gi|40889978|pdb|1VI5|A Chain A, Crystal Structure Of Ribosomal Protein S2p gi|40889979|pdb|1VI5|B Chain B, Crystal Structure Of Ribosomal Protein S2p gi|40889980|pdb|1VI5|C Chain C, Crystal Structure Of Ribosomal Protein S2p gi|40889981|pdb|1VI5|D Chain D, Crystal Structure Of Ribosomal Protein S2p Length = 208 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 40/61 (65%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++FV D +K A+ EA + IP+VA+ D+N++ VD VIP N+ R++A+ L+ Sbjct: 116 PEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNNSSADVDLVIPTNNKGRRALAIVYWLL 175 Query: 219 A 219 A Sbjct: 176 A 176 >gi|331223821|ref|XP_003324583.1| 40S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303573|gb|EFP80164.1| 40S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 368 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 49/212 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N MERY++ R + ++I++ T L A ++I+ + Sbjct: 89 ISLLLAAQCHIGSKNC--TKGMERYVYKRRADGVNVINIGHTWEKLIMAARIIT-AIENP 145 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T R +E Sbjct: 146 NDVCVISARPYGHRAVLKFAANTGAQAIAGRFTPGNFTNYIT--------RSFKE----- 192 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 193 --------------------------------PRLIVVTDPRLDAQAIREASYVNIPVIA 220 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 + DT+++ + VD IP N+ S+ L L+ Sbjct: 221 LCDTDASLNFVDVAIPTNNKGKHSVGLIWWLL 252 >gi|297841979|ref|XP_002888871.1| hypothetical protein ARALYDRAFT_895089 [Arabidopsis lyrata subsp. lyrata] gi|297334712|gb|EFH65130.1| hypothetical protein ARALYDRAFT_895089 [Arabidopsis lyrata subsp. lyrata] Length = 297 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 +R + + V G +N N +MERY+F RN+ +I +L +T LQ A +VI Sbjct: 19 VRMMCAAEVHLGTKNC--NYQMERYVFKRRNDGIYIFNLGKTWDKLQMAARVI------- 69 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 VA ++ D ++++A+ Q V + T + +I N+ Sbjct: 70 -----VAIEN-PQDIIVQSARPYGQRAV-------LKFAQYTGANAIAGRHTPGTFTNQM 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+E IPI+A Sbjct: 117 QTSFSE--------------------------PRLLILTDPRTDHQPIKEGALGNIPIIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 151 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLA 183 >gi|118793204|ref|XP_320736.3| AGAP011777-PA [Anopheles gambiae str. PEST] gi|229891783|sp|Q7PZ81|RSSA_ANOGA RecName: Full=40S ribosomal protein SA gi|116117266|gb|EAA00413.3| AGAP011777-PA [Anopheles gambiae str. PEST] Length = 285 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 + ++L + G + N +ME+Y++ R + HII+L +T L A + I+ ++ Sbjct: 15 VTKMLAATTHIGSTSV--NFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCIA-SIEYP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G + ++++ V++ A + + ++ G TN IQ Sbjct: 72 GEVFAISSRPYGQRAVLKYAHYTQATPIAGRFTPGAFTN------QIQT----------- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 T +E P L+ V D + + EA + IP++A Sbjct: 115 ----TFRE------------------------PRLLIVTDPLTDHQPVTEASYVNIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +T+S VD IP N S+ SI L ++A Sbjct: 147 FCNTDSPVKFVDIAIPCNTKSTHSIGLMWWMLA 179 >gi|164422215|gb|ABY55188.1| ribosomal protein S2 [Bambusa oldhamii] Length = 421 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 42/210 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + ++LL + G R + K+ YI RN I+D +T+ L+ AL I Sbjct: 1 MTILSIVCKKLLCTNAHLGRRVAAHHFKV--YICGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + GR F+ T +ME C+N S+W +G TN S + Sbjct: 59 SPIRQKGRSFFLKTNHLFRYEIMEEMAS----CINDSQWKIGAFFTN------SFANKKK 108 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 K N G ++ PD + +++ +R+ I EA Sbjct: 109 FHSRKKKINFGLNQQ-------------------------PDCVVILNADRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTN---SNPDLVDYVIPGND 205 R +IPI ++VD+ + + Y IP ND Sbjct: 144 RSQIPIASLVDSTIPWESHKRITYPIPAND 173 >gi|295671352|ref|XP_002796223.1| 40S ribosomal protein S0 [Paracoccidioides brasiliensis Pb01] gi|269969654|sp|C1GUB6|RSSA_PARBA RecName: Full=40S ribosomal protein S0 gi|226284356|gb|EEH39922.1| 40S ribosomal protein S0 [Paracoccidioides brasiliensis Pb01] Length = 295 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L ++ Sbjct: 121 PRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|134045942|ref|YP_001097428.1| 30S ribosomal protein S2 [Methanococcus maripaludis C5] gi|209573663|sp|A4FYC9|RS2_METM5 RecName: Full=30S ribosomal protein S2P gi|132663567|gb|ABO35213.1| SSU ribosomal protein S2P [Methanococcus maripaludis C5] Length = 220 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D +K A++EA + IP++ + DT +D++IP N+ +S++L L+ Sbjct: 113 PEVLFLSDPRVDKQALKEAIEIGIPVIGMCDTEHLTSHIDFIIPTNNKGRKSVSLMYYLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|8574691|gb|AAF77661.1|AF193928_1 mitochondrial protein [Laurus nobilis] Length = 134 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R + +N F ++ PD + ++D +R+ Sbjct: 55 PKKIRSRNKKIN-----FGSNQQ-----------------------PDCLVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRSQIPIASSVDSNIPLGSHKRITYPIPAND 122 >gi|8574689|gb|AAF77660.1|AF193927_1 mitochondrial protein [Calycanthus floridus] Length = 129 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R + +N F ++ PD + ++D +R+ Sbjct: 55 PKKIRSRKSAIN-----FGSNQQ-----------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRSQIPIASSVDSNIPLGSHKRITYPIPAND 122 >gi|11498733|ref|NP_069962.1| 30S ribosomal protein S2 [Archaeoglobus fulgidus DSM 4304] gi|3914879|sp|O29132|RS2_ARCFU RecName: Full=30S ribosomal protein S2P gi|2649456|gb|AAB90111.1| SSU ribosomal protein S2P (rps2P) [Archaeoglobus fulgidus DSM 4304] Length = 197 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 40/61 (65%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++FV D +K A+ EA + IP+VA+ D+N++ VD VIP N+ R++A+ L+ Sbjct: 115 PEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNNSSADVDLVIPTNNKGRRALAIVYWLL 174 Query: 219 A 219 A Sbjct: 175 A 175 >gi|316974753|gb|EFV58229.1| 40S ribosomal protein SA [Trichinella spiralis] Length = 688 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI EA + IP++A DT+S VD IP N+ ++SI L ++ Sbjct: 168 PLLLVVCDPRIDHQAITEASYVNIPVIAFCDTDSPMKFVDIAIPCNNKGAKSIGLLWWML 227 Query: 219 A 219 A Sbjct: 228 A 228 >gi|269969656|sp|C0S3U2|RSSA_PARBP RecName: Full=40S ribosomal protein S0 gi|225681813|gb|EEH20097.1| 40S ribosomal protein SA [Paracoccidioides brasiliensis Pb03] Length = 295 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNL--QVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ +I L ++A Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLA 181 >gi|311334528|emb|CBN08645.1| small nucleolar RNA, H/ACA box 62 [Microcosmus squamiger] Length = 277 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G N + +ME+YI+ R++ +II+L +T LQ A + I Sbjct: 8 LSLKEEDVSKMLAATTHIGSTNC--DFQMEQYIYKTRSDGVYIINLKKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I +++K V++ A + + ++ G TN Q R+ Sbjct: 66 V-AIENPADICVISSKQYGQRAVLKFASATGATAIAGRYTPGAFTN-----QIQAAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + I+E+ Sbjct: 119 ---------------------------------------PRLLIVTDPRTDHQPIRESAY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A+ +T+S VD IP N+ + SI L L+A Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKAKHSIGLLWWLLA 179 >gi|303244027|ref|ZP_07330366.1| ribosomal protein S2 [Methanothermococcus okinawensis IH1] gi|302485679|gb|EFL48604.1| ribosomal protein S2 [Methanothermococcus okinawensis IH1] Length = 220 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + IPI+ + DT +D++IP N+ ++++L L+ Sbjct: 113 PEVLFLSDPRVDRQALKEAIEIGIPIIGMCDTEHLTSFIDFIIPTNNKGRKAVSLIYYLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|159904610|ref|YP_001548272.1| 30S ribosomal protein S2 [Methanococcus maripaludis C6] gi|209573664|sp|A9A7B6|RS2_METM6 RecName: Full=30S ribosomal protein S2P gi|159886103|gb|ABX01040.1| ribosomal protein S2 [Methanococcus maripaludis C6] Length = 221 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D +K A++EA + IP+V + DT +D++IP N+ +S++L L+ Sbjct: 113 PEVLFLSDPRVDKQALKEAIEIGIPVVGMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|150403606|ref|YP_001330900.1| 30S ribosomal protein S2 [Methanococcus maripaludis C7] gi|209573665|sp|A6VJX3|RS2_METM7 RecName: Full=30S ribosomal protein S2P gi|150034636|gb|ABR66749.1| ribosomal protein S2 [Methanococcus maripaludis C7] Length = 221 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D +K A++EA + IP+V + DT +D++IP N+ +S++L L+ Sbjct: 113 PEVLFLSDPRVDKQALKEAIEIGIPVVGMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|269969655|sp|C1G1P4|RSSA_PARBD RecName: Full=40S ribosomal protein S0 gi|226288983|gb|EEH44495.1| 40S ribosomal protein S0 [Paracoccidioides brasiliensis Pb18] Length = 295 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNL--QVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ +I L ++A Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLA 181 >gi|320593737|gb|EFX06146.1| 40S ribosomal protein s0 [Grosmannia clavigera kw1407] Length = 296 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S D VD IP N+ +I L+ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGAVWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|289742825|gb|ADD20160.1| 40S ribosomal protein SA [Glossina morsitans morsitans] Length = 270 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 85/220 (38%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRPDGIHIINLGKTWEKLMLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIEHAPDVYVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPMTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S SI L L+A Sbjct: 140 INIPVIAFCNTDSALRYIDIAIPCNNKSPHSIGLMWWLLA 179 >gi|242213890|ref|XP_002472771.1| 40S ribosomal protein S2 [Postia placenta Mad-698-R] gi|269969660|sp|B8PAR0|RSSA_POSPM RecName: Full=40S ribosomal protein S0 gi|220728174|gb|EED82074.1| 40S ribosomal protein S2 [Postia placenta Mad-698-R] Length = 297 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +M Y++ R + HI+++ +T L A ++I+ + Sbjct: 16 IQLLLAAQAHIGSKNC--DKQMLPYVWKRRADGIHILNIGKTWEKLVFAARIIA-AIENP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T R +E Sbjct: 73 NDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYIT--------RSFKE----- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRLIVVTDPRVDHQAIREASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT++ VD IP N+ S SI L L+A Sbjct: 148 FCDTDAPLKFVDVAIPTNNKSRHSIGLMWWLLA 180 >gi|254583386|ref|XP_002497261.1| ZYRO0F01496p [Zygosaccharomyces rouxii] gi|269969664|sp|C5DX17|RSSA_ZYGRC RecName: Full=40S ribosomal protein S0 gi|238940154|emb|CAR28328.1| ZYRO0F01496p [Zygosaccharomyces rouxii] Length = 252 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 49/210 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL + G RN E Y+F R + +++D+ +T L A ++I+ + I Sbjct: 17 LLAANTHLGARNV--QVHQEPYVFKTRPDGVNVVDVGKTWEKLVLAARIIA-AIPNPEDI 73 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 + +++++ V++ + + + ++ G TN+ T R +E Sbjct: 74 VAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYIT--------RSFKE-------- 117 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 118 -----------------------------PRLIIVTDPRSDAQAIKEASYVNIPVIALTD 148 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +S + VD IP N+ SI L L+A Sbjct: 149 LDSPSEYVDVAIPCNNRGKHSIGLIWYLLA 178 >gi|157810|gb|AAA28667.1| laminin receptor [Drosophila melanogaster] Length = 253 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 49/210 (23%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +L + G N N +ME+Y++ R + +I++L +T LQ A + I + I Sbjct: 1 MLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIV-AIDNPSDI 57 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 ++++ V++ AK + + ++ G TN Q R+ Sbjct: 58 FVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE----------- 101 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D N + I EA + IP++A + Sbjct: 102 -----------------------------PRLLVVTDPNTDHQPIMEASYVNIPVIAFTN 132 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 T+S +D IP N+ S+ SI L L+A Sbjct: 133 TDSPLRYIDIAIPCNNKSAHSIGLMWWLLA 162 >gi|229891762|sp|B0X6V0|RSSA_CULQU RecName: Full=40S ribosomal protein SA Length = 290 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 74/195 (37%), Gaps = 47/195 (24%) Query: 26 NPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 N +ME Y+F R + HII+L +T L A + I+ ++ G + ++++ V++ Sbjct: 31 NFQMESYVFKRRPDGVHIINLGRTWEKLLLAARCIA-SIEYPGEVFAISSRQFGQRAVLK 89 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 A + + ++ G TN Q R+ Sbjct: 90 FAHYTEATPIAGRFTPGAFTN-----QIQPAFRE-------------------------- 118 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 P L+ V D + + EA + IP++A +T+S VD IP N Sbjct: 119 --------------PRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCN 164 Query: 205 DDSSRSIALFCDLVA 219 S SI L L+A Sbjct: 165 TKSPHSIGLMWWLLA 179 >gi|261201053|ref|XP_002626927.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis SLH14081] gi|269969624|sp|C5G8P1|RSSA_AJEDR RecName: Full=40S ribosomal protein S0 gi|269969625|sp|C5JKQ2|RSSA_AJEDS RecName: Full=40S ribosomal protein S0 gi|239593999|gb|EEQ76580.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis SLH14081] gi|239607128|gb|EEQ84115.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis ER-3] gi|327351079|gb|EGE79936.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis ATCC 18188] Length = 301 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L ++ Sbjct: 121 PRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|45358230|ref|NP_987787.1| 30S ribosomal protein S2 [Methanococcus maripaludis S2] gi|74572192|sp|Q6LZG2|RS2_METMP RecName: Full=30S ribosomal protein S2P gi|44920987|emb|CAF30223.1| SSU Ribosomal protein S2 [Methanococcus maripaludis S2] Length = 220 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 38/61 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D +K A++EA + IP++ + DT +D++IP N+ +S++L L+ Sbjct: 113 PEVLFLSDPRVDKQALKEAIEIGIPVIGMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLI 172 Query: 219 A 219 A Sbjct: 173 A 173 >gi|328861353|gb|EGG10456.1| hypothetical protein MELLADRAFT_42122 [Melampsora larici-populina 98AG31] Length = 297 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 33/55 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P L+ V D + AI+EA + IP++A+ DT++ + VD IP N+ S SI L Sbjct: 121 PRLIVVTDPRLDAQAIREASYVNIPVIALCDTDAALNFVDVAIPTNNKSKHSIGL 175 >gi|242220273|ref|XP_002475905.1| 40S ribosomal protein S0 [Postia placenta Mad-698-R] gi|220724891|gb|EED78906.1| 40S ribosomal protein S0 [Postia placenta Mad-698-R] Length = 209 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +M Y++ R + HI+++ +T L A ++I+ + Sbjct: 16 IQLLLAAQAHIGSKNC--DKQMLPYVWKRRADGIHILNIGKTWEKLVFAARIIA-AIENP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T R +E Sbjct: 73 NDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYIT--------RSFKE----- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRLIVVTDPRVDHQAIREASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT++ VD IP N+ S SI L L+A Sbjct: 148 FCDTDAPLKFVDVAIPTNNKSRHSIGLMWWLLA 180 >gi|8574699|gb|AAF77665.1|AF193932_1 mitochondrial protein [Liriodendron tulipifera] Length = 134 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R + +N F ++ PD + ++D +R+ Sbjct: 55 PKKIRSRNKKIN-----FGSNQQ-----------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRSQIPIASSVDSNIPLGSHKRITYPIPAND 122 >gi|313226911|emb|CBY22056.1| unnamed protein product [Oikopleura dioica] gi|313246892|emb|CBY35746.1| unnamed protein product [Oikopleura dioica] Length = 289 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 51/221 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNT--HIIDLSQTVPMLQKALQV 58 +A + IR+++ + V G N + +M +Y+ RN HI +L +T L A + Sbjct: 8 LAPTEADIRRMIAAKVHLGDVNH--DHRMGQYVHG-RNQAQNHIFNLGKTWEKLMLAARA 64 Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 I+ +V + ++ K Q +++ A ++ + ++ G TN Sbjct: 65 IA-SVENPADVAVISGKPQGQRAILKFAAKTGATPIAGRYTPGAFTN------------- 110 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +NQ ++ P L+ V D + I E+ Sbjct: 111 -------QNQSSFRE-------------------------PRLLIVTDPRVDHQPITESS 138 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A+ D++S VD IP N+ + SI L +A Sbjct: 139 YVNIPVIALCDSDSPSKFVDIAIPCNNKGTHSIGLIWWTLA 179 >gi|154346432|ref|XP_001569153.1| 40S ribosomal protein SA [Leishmania braziliensis MHOM/BR/75/M2904] gi|229891587|sp|A4HQ28|RSSA_LEIBR RecName: Full=40S ribosomal protein SA gi|134066495|emb|CAM44289.1| putative 40S ribosomal protein SA [Leishmania braziliensis MHOM/BR/75/M2904] Length = 246 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+EA + IP++A+ DT++ D VD IP N+ +SI + L+ Sbjct: 122 PRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|48477589|ref|YP_023295.1| 30S ribosomal protein S2 [Picrophilus torridus DSM 9790] gi|61215563|sp|Q6L1Q0|RS2_PICTO RecName: Full=30S ribosomal protein S2P gi|48430237|gb|AAT43102.1| small subunit ribosomal protein S2P [Picrophilus torridus DSM 9790] Length = 200 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 147 RALDGIRDMGGLPD-----LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVI 201 R + G LP+ ++ V D + A++EA ++ IPI+A+ D N+ D VD +I Sbjct: 96 RFIPGTLTNPALPNYSEAKIILVTDPLADTQAMKEAIKVGIPIIAMCDANNKTDFVDLII 155 Query: 202 PGNDDSSRSIALFCDLVA 219 P N+ RS+A+ L+A Sbjct: 156 PTNNKGRRSLAVIYWLLA 173 >gi|290980450|ref|XP_002672945.1| predicted protein [Naegleria gruberi] gi|284086525|gb|EFC40201.1| predicted protein [Naegleria gruberi] Length = 258 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+EA + IP++A DT+S VD IP N+ + SIAL ++ Sbjct: 124 PRVLIVSDPRSDYQAIKEASKANIPVIAFADTDSPLKFVDIAIPVNNKNKNSIALMYWML 183 Query: 219 A 219 A Sbjct: 184 A 184 >gi|118484199|gb|ABK93980.1| unknown [Populus trichocarpa] Length = 316 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 49/216 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTV 63 + I+ +L + V G +N + +MERY+F RN+ +II+L +T L A +VI + Sbjct: 20 ELDIQMMLAAEVHLGTKNC--DFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVIV-AI 76 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ++ + + V++ A+ + + + + G TN S Sbjct: 77 ENPQDMIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTS------------- 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F++ P L+ + D + I+EA IP Sbjct: 124 ------FSE--------------------------PRLLILTDPRTDHQPIKEAALGNIP 151 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +A+ DT+S + VD IP N+ SI L+A Sbjct: 152 TIALCDTDSPMNFVDIGIPANNKGKHSIGCLFWLLA 187 >gi|8574679|gb|AAF77655.1|AF193922_1 mitochondrial protein [Drimys winteri] Length = 134 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R + +N F ++ PD + ++D +R+ Sbjct: 55 PKKIRSRNKKIN-----FGSNQQ-----------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRSQIPIASSVDSNIPLGSYKRITYPIPAND 122 >gi|57641431|ref|YP_183909.1| 30S ribosomal protein S2 [Thermococcus kodakarensis KOD1] gi|73918000|sp|Q5JJD2|RS2_PYRKO RecName: Full=30S ribosomal protein S2P gi|57159755|dbj|BAD85685.1| SSU ribosomal protein S2P [Thermococcus kodakarensis KOD1] Length = 201 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 111 PDVLIVTDPRADHQALKEAVEIGIPIVALVDTENFLSYVDIAIPTNNKGRKALALIYWIL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|159489000|ref|XP_001702485.1| ribosomal protein Sa, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii] gi|229891583|sp|A8IB25|RSSA_CHLRE RecName: Full=40S ribosomal protein SA gi|158280507|gb|EDP06264.1| ribosomal protein Sa [Chlamydomonas reinhardtii] Length = 279 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 63/225 (28%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + G +N + +MERY++ R + +II+L +T LQ A ++I Sbjct: 10 IQMMLAAQCHLGTKNCHY--QMERYMYRRRQDGIYIINLEKTYEKLQMAARII------- 60 Query: 67 GRILFVATKSQASDCVMEAAK-------RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 VA ++ CV+ A + AQY + K + G T T + IQK Sbjct: 61 -----VAIENPQDICVLSARPYGQRAVFKFAQY-LGCKSMAGRHTP-GTFTNQIQK--AF 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 EE P L+ + D + ++E+ Sbjct: 112 EE-------------------------------------PRLLILTDPRTDHQPVKESSY 134 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP +A DT+S VD IP N+ SI + L+A ++ Sbjct: 135 MNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLE 179 >gi|229891590|sp|A2I3Z2|RSSA_MACHI RecName: Full=40S ribosomal protein SA gi|121543783|gb|ABM55561.1| putative ribosomal protein SA [Maconellicoccus hirsutus] Length = 308 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D +K I EA + IP++A +T+S VD IP N S+ SI L L+ Sbjct: 119 PRLLVVTDPAEDKQPITEASYVNIPVIAFCNTDSPLRYVDIAIPCNTKSAHSIGLMWWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|268574158|ref|XP_002642056.1| C. briggsae CBR-RPS-0 protein [Caenorhabditis briggsae] gi|229891582|sp|A8XSS1|RSSA_CAEBR RecName: Full=40S ribosomal protein SA gi|187025058|emb|CAP35523.1| CBR-RPS-0 protein [Caenorhabditis briggsae AF16] Length = 278 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ + D + A+ EA + +P+++ V+T S L+D +P N+ RSI L ++ Sbjct: 119 PRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWML 178 Query: 219 ASAAI---DGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 A + I+RQ ++ D K + ++ + E++ + + V + QE P+ Sbjct: 179 AREILILRGKISRQTGFV-LDGKEIMPDLYFYRDPTETEKEETGAHAEVAETQEFQQQPD 237 Query: 276 L 276 + Sbjct: 238 I 238 >gi|116753791|ref|YP_842909.1| 30S ribosomal protein S2 [Methanosaeta thermophila PT] gi|121694448|sp|A0B6E5|RS2_METTP RecName: Full=30S ribosomal protein S2P gi|116665242|gb|ABK14269.1| SSU ribosomal protein S2P [Methanosaeta thermophila PT] Length = 206 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP+VA+ DTN+ VD VIP N+ +++ L L+ Sbjct: 122 PDVLLVTDPAGDGQAVKEAVDIGIPVVALCDTNNMTSNVDLVIPTNNKGRKALTLIYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|8574661|gb|AAF77646.1|AF193913_1 mitochondrial protein [Asarum canadense] Length = 134 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A + C+N S+W +GG +TN ++ + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATKIG--CINDSQWRIGGFLTNCSSLRKK 58 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 I + + + N++ PD + ++D +R+ Sbjct: 59 INRNKKINFGSNQQ--------------------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRSQIPIASSVDSNIPLGSYKRITYPIPAND 122 >gi|16082199|ref|NP_394646.1| 30S ribosomal protein S2 [Thermoplasma acidophilum DSM 1728] gi|12230550|sp|P57712|RS2_THEAC RecName: Full=30S ribosomal protein S2P gi|10640501|emb|CAC12315.1| probable 30S ribosomal protein S2 [Thermoplasma acidophilum] Length = 199 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 37/59 (62%) Query: 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 ++ V D + A++EA ++ IPI+A+ D N+ D VD +IP N+ RS+A+ L+A Sbjct: 114 VIIVTDPLADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLA 172 >gi|14324616|dbj|BAB59543.1| ribosomal protein small subunit S0 [Thermoplasma volcanium GSS1] Length = 206 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 37/59 (62%) Query: 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 ++ V D + A++EA ++ IPI+A+ D N+ D VD VIP N+ RS+A+ L+A Sbjct: 121 VIVVTDPLADVQAMKEAIKIGIPIIALCDANNKTDFVDLVIPTNNKGRRSLAVIYWLLA 179 >gi|146417344|ref|XP_001484641.1| 40S ribosomal protein S0 [Meyerozyma guilliermondii ATCC 6260] gi|229891603|sp|A5DGG9|RSSA_PICGU RecName: Full=40S ribosomal protein S0 gi|146390114|gb|EDK38272.1| 40S ribosomal protein S0 [Meyerozyma guilliermondii ATCC 6260] Length = 261 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S D VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPTDYVDIAIPCNNKGKHSIGLIWWLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|323451948|gb|EGB07823.1| hypothetical protein AURANDRAFT_4875 [Aureococcus anophagefferens] Length = 219 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+++L + G RN + ME YI+ R + HII++ +T L A +V++ + Sbjct: 9 IQKMLSAQCHIGTRNS--DHMMEEYIWRRRQDGIHIINVGKTWEKLMLAARVLT-AIENP 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ ++ + V++ A+ + + ++ G TN Q + +E Sbjct: 66 QDIIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTN--------QITKQFKE----- 112 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ + D + A++EA + +P++A Sbjct: 113 --------------------------------PRILVITDPRTDSQAVKEASYVNLPVIA 140 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D++S VD IP N+ SI L L+A Sbjct: 141 FCDSDSPCQHVDVAIPSNNKGKLSIGLLYWLLA 173 >gi|296110053|ref|YP_003617002.1| ribosomal protein S2 [Methanocaldococcus infernus ME] gi|295434867|gb|ADG14038.1| ribosomal protein S2 [Methanocaldococcus infernus ME] Length = 221 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + IPIV++ DT +D VIP N+ +++AL L+ Sbjct: 114 PEVIFISDPRVDRQALREATEIGIPIVSLCDTEHLTTFIDLVIPTNNKGKKAVALIYYLM 173 Query: 219 A 219 Sbjct: 174 T 174 >gi|13541230|ref|NP_110918.1| 30S ribosomal protein S2 [Thermoplasma volcanium GSS1] gi|20978671|sp|Q97BQ4|RS2_THEVO RecName: Full=30S ribosomal protein S2P Length = 199 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 37/59 (62%) Query: 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 ++ V D + A++EA ++ IPI+A+ D N+ D VD VIP N+ RS+A+ L+A Sbjct: 114 VIVVTDPLADVQAMKEAIKIGIPIIALCDANNKTDFVDLVIPTNNKGRRSLAVIYWLLA 172 >gi|18978012|ref|NP_579369.1| 30S ribosomal protein S2 [Pyrococcus furiosus DSM 3638] gi|23822122|sp|Q8U0F0|RS2_PYRFU RecName: Full=30S ribosomal protein S2P gi|18893793|gb|AAL81764.1| SSU ribosomal protein S2P [Pyrococcus furiosus DSM 3638] Length = 202 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 112 PDVLIVTDPRADHQAMREAVEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWIL 171 Query: 219 A 219 A Sbjct: 172 A 172 >gi|254167057|ref|ZP_04873910.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|197623913|gb|EDY36475.1| ribosomal protein S2 [Aciduliprofundum boonei T469] Length = 199 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ + D + A++EA + +IPI+A+ D N+ VD +IP N+ R++AL L+ Sbjct: 112 PKVILINDPAADTQALKEAVKSKIPIIALCDANNRTSYVDLIIPTNNKGRRALALIYWLL 171 Query: 219 A 219 A Sbjct: 172 A 172 >gi|224071007|ref|XP_002303327.1| predicted protein [Populus trichocarpa] gi|222840759|gb|EEE78306.1| predicted protein [Populus trichocarpa] Length = 257 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 49/216 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTV 63 + I+ +L + V G +N + +MERY+F RN+ +II+L +T L A +VI + Sbjct: 14 ELDIQMMLAAEVHLGTKNC--DFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVIV-AI 70 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ++ + + V++ A+ + + + + G TN S Sbjct: 71 ENPQDMIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTS------------- 117 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F++ P L+ + D + I+EA IP Sbjct: 118 ------FSE--------------------------PRLLILTDPRTDHQPIKEAALGNIP 145 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +A DT+S + VD IP N+ SI L+A Sbjct: 146 TIAFCDTDSPMNFVDIGIPANNKGKHSIGCLFWLLA 181 >gi|118481845|gb|ABK92859.1| unknown [Populus trichocarpa] Length = 316 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 49/216 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTV 63 + I+ +L + V G +N + +MERY+F RN+ +II+L +T L A +VI + Sbjct: 20 ELDIQMMLAAEVHLGTKNC--DFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVIV-AI 76 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ++ + + V++ A+ + + + + G TN S Sbjct: 77 ENPQDMIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTS------------- 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F++ P L+ + D + I+EA IP Sbjct: 124 ------FSE--------------------------PRLLILTDPRTDHQPIKEAALGNIP 151 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +A DT+S + VD IP N+ SI L+A Sbjct: 152 TIAFCDTDSPMNFVDIGIPANNKGKHSIGCLFWLLA 187 >gi|254167656|ref|ZP_04874507.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|289596976|ref|YP_003483672.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|197623465|gb|EDY36029.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|289534763|gb|ADD09110.1| ribosomal protein S2 [Aciduliprofundum boonei T469] Length = 199 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ + D + A++EA + +IPI+A+ D N+ VD +IP N+ R++AL L+ Sbjct: 112 PKVILINDPAADTQALKEAVKSKIPIIALCDANNRTSYVDLIIPTNNKGRRALALIYWLL 171 Query: 219 A 219 A Sbjct: 172 A 172 >gi|2129246|pir||F64422 ribosomal protein HS2 homolog - Methanococcus jannaschii Length = 225 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + +PIV + DT +D VIP N+ +++AL L+ Sbjct: 116 PEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLL 175 Query: 219 A 219 Sbjct: 176 T 176 >gi|157136928|ref|XP_001663866.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] gi|229891764|sp|Q16ZR8|RSSA_AEDAE RecName: Full=40S ribosomal protein SA gi|94468996|gb|ABF18347.1| 40S ribosomal protein SA [Aedes aegypti] gi|108869817|gb|EAT34042.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] Length = 288 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/220 (21%), Positives = 84/220 (38%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + ++L + G + N +ME Y++ R + HII+L +T L A + I Sbjct: 8 LALKDDDVTKMLAATTHVGSTSV--NFQMESYVYKRRPDGVHIINLGRTWEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ G + ++++ V++ A + ++ G TN Q R+ Sbjct: 66 A-SIEYPGEVFAISSRPYGQRAVLKFAHYTEATPTAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + + EA Sbjct: 119 ---------------------------------------PRLLIVTDPLTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S VD IP N+ S SI L L+A Sbjct: 140 VNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSIGLMWWLLA 179 >gi|45185548|ref|NP_983264.1| ACL140Cp [Ashbya gossypii ATCC 10895] gi|74695136|sp|Q75CQ9|RSSA_ASHGO RecName: Full=40S ribosomal protein S0 gi|44981266|gb|AAS51088.1| ACL140Cp [Ashbya gossypii ATCC 10895] Length = 253 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D S + VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRSDAQAIKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|15669172|ref|NP_247977.1| 30S ribosomal protein S2 [Methanocaldococcus jannaschii DSM 2661] gi|3334488|sp|P54109|RS2_METJA RecName: Full=30S ribosomal protein S2P gi|2826355|gb|AAB98985.1| SSU ribosomal protein S2P [Methanocaldococcus jannaschii DSM 2661] Length = 222 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + +PIV + DT +D VIP N+ +++AL L+ Sbjct: 113 PEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLL 172 Query: 219 A 219 Sbjct: 173 T 173 >gi|153012210|ref|YP_001381725.1| ribosomal protein S2 [Medicago truncatula] Length = 56 Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 28/46 (60%) Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IP + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 3 LGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 48 >gi|303271761|ref|XP_003055242.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463216|gb|EEH60494.1| predicted protein [Micromonas pusilla CCMP1545] Length = 266 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L +G G +N + +MERY++ R++ +II+L +T D + Sbjct: 11 IQMMLAAGCHLGTKNCDF--QMERYVWKRRSDGIYIINLGKT-----------WDKLMLA 57 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 RIL VA ++ A D V ++A+ Q V + T +++I N+ Sbjct: 58 ARIL-VAIENPA-DVVCQSARPYGQRAV-------LKYAQYTGAKAIAGRHTPGTYTNQI 108 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +GF + P ++ + D ++ I E + +P +A Sbjct: 109 QEGFHE--------------------------PRVLVLTDPRTDQQPISETAYVNLPTIA 142 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S LVD IP N+ + SI L+A Sbjct: 143 FCDTDSPLKLVDVAIPANNKAKHSIGCLYYLLA 175 >gi|34500109|gb|AAQ73638.1| ribosome-associated protein RAP1-like protein [Epichloe festucae] Length = 205 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S+ + VD IP N+ +I L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSSTEYVDVAIPTNNKGRHAIGTIWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|315229902|ref|YP_004070338.1| 30S ribosomal protein SAe (S2p) [Thermococcus barophilus MP] gi|315182930|gb|ADT83115.1| SSU ribosomal protein SAe (S2p) [Thermococcus barophilus MP] Length = 201 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 111 PDVLIVTDPRADHQALKEAVEVGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWIL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|148716965|dbj|BAF63699.1| ribosomal protein SA [Antheraea yamamai] Length = 189 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V+D ++ I EA + IP++A+ +T+S VD IP N SS SI L L+ Sbjct: 67 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 126 Query: 219 A 219 A Sbjct: 127 A 127 >gi|46138781|ref|XP_391081.1| hypothetical protein FG10905.1 [Gibberella zeae PH-1] Length = 294 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N ME Y++ R + ++I++ +T + A +VI+ + Sbjct: 17 IETLLAAQCHLGSKNL--QVHMENYLWKTRQDGVNVINVGKTWEKIVLAARVIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T R +E Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGSFTNYIT--------RSFKE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT+S + VD IP N+ +I ++A Sbjct: 149 LADTDSPTEYVDVAIPTNNKGRHAIGAVWWMLA 181 >gi|241953441|ref|XP_002419442.1| ribosomal protein SO-A homologue, putative; ribosomal protein of the small subunit, putative [Candida dubliniensis CD36] gi|269969628|sp|B9WEC5|RSSA_CANDC RecName: Full=40S ribosomal protein S0 gi|223642782|emb|CAX43036.1| ribosomal protein SO-A homologue, putative [Candida dubliniensis CD36] Length = 261 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLI 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|321467258|gb|EFX78249.1| hypothetical protein DAPPUDRAFT_320706 [Daphnia pulex] Length = 301 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/220 (20%), Positives = 88/220 (40%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G N + +ME+Y++ R++ HII+L +T L A + I Sbjct: 8 LSLKEDDVTKMLAATTHIGSTNV--DFQMEQYVYKRRSDGVHIINLRRTYEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + V+++ Q ++ A + + ++ G TN Q R+ Sbjct: 66 V-AIENSADVFVVSSRPQGQRAALKFASYTKATPIAGRFTPGAFTN-----QIQAAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ ++D + I EA Sbjct: 119 ---------------------------------------PRLLVIMDPRADHQPIVEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A+ +T+S VD IP N+ +S SI L ++A Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKASHSIGLMFYMLA 179 >gi|240104016|ref|YP_002960325.1| 30S ribosomal protein S2 [Thermococcus gammatolerans EJ3] gi|239911570|gb|ACS34461.1| SSU ribosomal protein S2P (rps2P) [Thermococcus gammatolerans EJ3] Length = 201 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 111 PDVIIVTDPRADHQAMKEAIEVGIPIVALVDTENFLSYVDLAIPTNNKGRKALALIYWIL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|212223258|ref|YP_002306494.1| 30S ribosomal protein S2 [Thermococcus onnurineus NA1] gi|212008215|gb|ACJ15597.1| SSU ribosomal protein S2P [Thermococcus onnurineus NA1] Length = 201 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + +PIVA+VDT + VD IP N+ +++AL ++ Sbjct: 111 PDVLIVTDPRADHQAMKEAIEIGVPIVALVDTENFLSYVDVAIPTNNKGRKALALIYWIL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|256811345|ref|YP_003128714.1| ribosomal protein S2 [Methanocaldococcus fervens AG86] gi|256794545|gb|ACV25214.1| ribosomal protein S2 [Methanocaldococcus fervens AG86] Length = 222 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + +PIV + DT +D VIP N+ +++AL L+ Sbjct: 113 PEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLL 172 Query: 219 A 219 Sbjct: 173 T 173 >gi|254172783|ref|ZP_04879457.1| ribosomal protein S2 [Thermococcus sp. AM4] gi|214032939|gb|EEB73767.1| ribosomal protein S2 [Thermococcus sp. AM4] Length = 201 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 111 PDVIIVTDPRADHQAMKEAIEVGIPIVALVDTENFLSYVDLAIPTNNKGRKALALIYWIL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|322698585|gb|EFY90354.1| 40S ribosomal protein S0 [Metarhizium acridum CQMa 102] gi|322709782|gb|EFZ01357.1| 40S ribosomal protein S0 [Metarhizium anisopliae ARSEF 23] Length = 280 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I L+ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSLTEYVDVAIPTNNKGRHAIGTIWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|8574703|gb|AAF77667.1|AF193934_1 mitochondrial protein [Ranunculus sp. Qiu 95024] Length = 134 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG TN K+ Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIG--CINDSQWRIGGFFTNKKS---- 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 TKK R R + PD + ++D +R+ Sbjct: 55 ------------------TKKIR----------SRNNNNNFGSNQQPDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRSQIPIASSVDSNIPLGSYKRITYPIPAND 122 >gi|332157857|ref|YP_004423136.1| 30S ribosomal protein S2 [Pyrococcus sp. NA2] gi|331033320|gb|AEC51132.1| 30S ribosomal protein S2 [Pyrococcus sp. NA2] Length = 205 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ + D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 115 PDVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWIL 174 Query: 219 A 219 A Sbjct: 175 A 175 >gi|302898982|ref|XP_003047956.1| hypothetical protein NECHADRAFT_68978 [Nectria haematococca mpVI 77-13-4] gi|269969652|sp|C7Z0Q8|RSSA_NECH7 RecName: Full=40S ribosomal protein S0 gi|256728888|gb|EEU42243.1| hypothetical protein NECHADRAFT_68978 [Nectria haematococca mpVI 77-13-4] Length = 296 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALTDTDSPTEYVDVAIPTNNKGRHAIGCVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|261402674|ref|YP_003246898.1| ribosomal protein S2 [Methanocaldococcus vulcanius M7] gi|261369667|gb|ACX72416.1| ribosomal protein S2 [Methanocaldococcus vulcanius M7] Length = 223 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + +PIV + DT +D VIP N+ +++AL L+ Sbjct: 114 PEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLL 173 Query: 219 A 219 Sbjct: 174 T 174 >gi|56199516|gb|AAV84247.1| ribosomal protein 2A [Culicoides sonorensis] Length = 210 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 49/211 (23%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++L + +G N N +ME+Y++ R + HII+L +T + A + I + + G Sbjct: 17 KMLVATTHWGSENV--NFQMEQYVYKRRQDGVHIINLGRTWEKILLAARAIV-AIEQPGE 73 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + ++++S V++ A + + + G TN Q R+ Sbjct: 74 VYAISSRSFGQRAVLKYAHYTGATPIAGRXTPGAFTN-----QIQPAFRE---------- 118 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 P L+ V D + + EA + IP++A Sbjct: 119 ------------------------------PRLLIVTDPLTDHQPLTEASYVNIPVIAFC 148 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 +T+S VD IP N+ S SI L L+A Sbjct: 149 NTDSPLKYVDIAIPCNNKSPYSIGLMWWLLA 179 >gi|14520753|ref|NP_126228.1| 30S ribosomal protein S2 [Pyrococcus abyssi GE5] gi|12230555|sp|Q9V191|RS2_PYRAB RecName: Full=30S ribosomal protein S2P gi|5457969|emb|CAB49459.1| rps2P SSU ribosomal protein S2P [Pyrococcus abyssi GE5] Length = 202 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ + D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 112 PDVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWIL 171 Query: 219 A 219 A Sbjct: 172 A 172 >gi|289193067|ref|YP_003459008.1| ribosomal protein S2 [Methanocaldococcus sp. FS406-22] gi|288939517|gb|ADC70272.1| ribosomal protein S2 [Methanocaldococcus sp. FS406-22] Length = 222 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D ++ A++EA + +PI+++ DT +D VIP N+ +++AL L+ Sbjct: 113 PEVVFISDPRVDRQALKEATEIGVPIISLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLL 172 Query: 219 A 219 Sbjct: 173 T 173 >gi|209892871|ref|YP_002290844.1| rps2 [Babesia bovis T2Bo] gi|154795880|gb|EDO05064.1| rps2 [Babesia bovis] Length = 221 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 38/205 (18%) Query: 39 NTHIIDLSQTVPMLQKALQVISDTVARGGRILFV-ATKSQASDCVMEAAKRSAQYCVNSK 97 N +II++ T L K ++I I + TK + + K + C+N+ Sbjct: 34 NCYIINILHTAVSLYKLYKIIFLLSKNKSYITLINTTKLNTNKFIYYLTKFTNSNCINTS 93 Query: 98 WLGGMMTNWKTVSQS-------IQKLRDLEELLN----------KENQGFTKKERLNIER 140 W+ G +TN KTV Q+ I KL +L+ ++ K FTK + NI Sbjct: 94 WINGTLTN-KTVIQNLIIIHLFISKLCELDNEIDMPLITKLKKLKIKYNFTKYLK-NISC 151 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 + +F+++ + LA++E + V D N N L D Sbjct: 152 SK------------------FVFILNLDSNILAVKECNSKNKFTMGVCDLNFNTLLTDLN 193 Query: 201 IPGNDDSSRSIALFCDLVASAAIDG 225 I N+ + +SI F + S I G Sbjct: 194 ILSNNVNFKSINFFIKFIISPIIRG 218 >gi|145605595|ref|XP_001406293.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|229891591|sp|A4R188|RSSA_MAGO7 RecName: Full=40S ribosomal protein S0 gi|145013412|gb|EDJ98053.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 287 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ DT+S + VD IP N+ +I ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHAIGCIWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|15790223|ref|NP_280047.1| 30S ribosomal protein S2 [Halobacterium sp. NRC-1] gi|169235952|ref|YP_001689152.1| 30S ribosomal protein S2 [Halobacterium salinarum R1] gi|12230551|sp|P57713|RS2_HALSA RecName: Full=30S ribosomal protein S2P gi|209573653|sp|B0R4Y9|RS2_HALS3 RecName: Full=30S ribosomal protein S2P gi|10580681|gb|AAG19527.1| 30S ribosomal protein S2P [Halobacterium sp. NRC-1] gi|167727018|emb|CAP13804.1| ribosomal protein S2 [Halobacterium salinarum R1] Length = 249 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 44/74 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ R++++ L+ Sbjct: 167 PDVLVVTDPIGDSQAVKEAITVGIPVIAMCDSNNQTGNVDLVVPTNNKGRRALSVVYWLL 226 Query: 219 ASAAIDGIARQHSY 232 A+ +D + +Y Sbjct: 227 ANETLDRRGAEPTY 240 >gi|255712075|ref|XP_002552320.1| KLTH0C02112p [Lachancea thermotolerans] gi|269969650|sp|C5DDM1|RSSA_LACTC RecName: Full=40S ribosomal protein S0 gi|238933699|emb|CAR21882.1| KLTH0C02112p [Lachancea thermotolerans] Length = 251 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNKGKHSIGLIWYLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|122066029|sp|Q0PXX8|RSSA_DIACI RecName: Full=40S ribosomal protein SA gi|110671460|gb|ABG81981.1| putative 40S ribosomal protein SA [Diaphorina citri] Length = 301 Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust. Identities = 46/220 (20%), Positives = 85/220 (38%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G N + +ME+Y++ RN+ HI++L +T L A + I Sbjct: 8 LSLKEDDVTKMLGAQTHIGSENS--DYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Q R+ Sbjct: 66 V-AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTN-----QIQAAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPHTDHQPITEAAY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T S VD IP N+ S SI L L+A Sbjct: 140 VNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLA 179 >gi|145510154|ref|XP_001441010.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408249|emb|CAK73613.1| unnamed protein product [Paramecium tetraurelia] Length = 236 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 45/214 (21%), Positives = 96/214 (44%), Gaps = 47/214 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I++L+ S G + ++ M+RY+ +N ++I++L +T ++ A +VI+ + + Sbjct: 8 IKRLIASQCHVGTKQLHFD--MKRYVSHRSDNGSYILNLEETWQHIKLAARVIA-AIEQP 64 Query: 67 GRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+++ V++ A + A +++W G +TN QS L+E Sbjct: 65 QDVMVVSSRPIGQRAVIKFAHYTLASSTRSARWTPGTLTN-----QSNSASGKLQE---- 115 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + ++ AI EA + IP++ Sbjct: 116 ---------------------------------PQLLIVTDPHLDRQAIVEASYVNIPVI 142 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ ++++ VD IP + ++SI++ L+A Sbjct: 143 ALTNSDTPLQYVDIPIPVGNRETKSISMIYWLLA 176 >gi|156848330|ref|XP_001647047.1| hypothetical protein Kpol_1050p46 [Vanderwaltozyma polyspora DSM 70294] gi|229891572|sp|A7TEU3|RSSA1_VANPO RecName: Full=40S ribosomal protein S0-A gi|156117730|gb|EDO19189.1| hypothetical protein Kpol_1050p46 [Vanderwaltozyma polyspora DSM 70294] Length = 252 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|126133949|ref|XP_001383499.1| ribosomal protein S0A [Scheffersomyces stipitis CBS 6054] gi|229891604|sp|A3LRZ0|RSSA_PICST RecName: Full=40S ribosomal protein S0 gi|126095648|gb|ABN65470.1| ribosomal protein S0A [Scheffersomyces stipitis CBS 6054] Length = 261 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLI 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|325958573|ref|YP_004290039.1| 30S ribosomal protein S2 [Methanobacterium sp. AL-21] gi|325330005|gb|ADZ09067.1| ribosomal protein S2 [Methanobacterium sp. AL-21] Length = 198 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 39/67 (58%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI EAR++ IP+VA+ DT + VD V+P N+ ++IAL L+ Sbjct: 111 PKVLVVTDPRSDSQAIIEARQIGIPVVALCDTENLLGNVDIVVPVNNKGRKAIALVYWLL 170 Query: 219 ASAAIDG 225 A + G Sbjct: 171 ARQNLRG 177 >gi|50309339|ref|XP_454677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74660381|sp|Q6CN12|RSSA_KLULA RecName: Full=40S ribosomal protein S0 gi|49643812|emb|CAG99764.1| KLLA0E16171p [Kluyveromyces lactis] Length = 254 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|157117892|ref|XP_001653087.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] gi|108875928|gb|EAT40153.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] Length = 362 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 47/195 (24%) Query: 26 NPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 N +ME Y++ R + HII+L +T L A + I+ ++ G + ++++ V++ Sbjct: 105 NFQMESYVYKRRPDGVHIINLGRTWEKLLLAARCIA-SIEYPGEVFAISSRPYGQRAVLK 163 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 A + ++ G TN IQ Sbjct: 164 FAHYTEATPTAGRFTPGAFTN------QIQP----------------------------- 188 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 R+ P L+ V D + + EA + IP++A +T+S VD IP N Sbjct: 189 ------AFRE----PRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCN 238 Query: 205 DDSSRSIALFCDLVA 219 + S SI L L+A Sbjct: 239 NKSPHSIGLMWWLLA 253 >gi|281201828|gb|EFA76036.1| 40S ribosomal protein SA [Polysphondylium pallidum PN500] Length = 277 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I ++L G N + ME Y++ ++N THI++L++T +Q A +VI + Sbjct: 46 ILKMLACQTHMGTTNC--DKNMETYVWKRKDNGTHILNLAKTWEKIQLAARVIV-AIENP 102 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ ++ V++ A + ++ G TN IQ Sbjct: 103 ADISIISAQAYGQRAVLKFANFVGATAFSGRFTPGTFTN------QIQ------------ 144 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 FT+ P L+ V D ++ + EA + IP +A Sbjct: 145 -SKFTE--------------------------PRLLIVCDPVSDRQPLMEASYVNIPTIA 177 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + +T+S D +D IP N+ SIAL L+A Sbjct: 178 LCNTDSKLDGIDIAIPCNNRGKNSIALMFWLLA 210 >gi|255072475|ref|XP_002499912.1| predicted protein [Micromonas sp. RCC299] gi|226515174|gb|ACO61170.1| predicted protein [Micromonas sp. RCC299] Length = 296 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L +G G +N + +MERY++ R + +II+L +T D + Sbjct: 12 IQMMLAAGCHLGTKNC--DFQMERYVWKRRQDGIYIINLGKTW-----------DKLMLA 58 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 RIL VA ++ SD V+++++ Q V + T +++I N+ Sbjct: 59 ARIL-VAIENP-SDVVVQSSRPYGQRAV-------LKYAQYTGAKAIAGRHTPGTYTNQI 109 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +GF + P ++ + D + I E + +P +A Sbjct: 110 QEGFHE--------------------------PRVLVLTDPRTDHQPISETAYVNLPTIA 143 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S LVD IP N+ + SI L+A Sbjct: 144 FCDTDSPLKLVDVAIPANNKAKHSIGCLYYLLA 176 >gi|169605389|ref|XP_001796115.1| hypothetical protein SNOG_05719 [Phaeosphaeria nodorum SN15] gi|229891761|sp|Q0UR95|RSSA_PHANO RecName: Full=40S ribosomal protein S0 gi|160706754|gb|EAT86783.2| hypothetical protein SNOG_05719 [Phaeosphaeria nodorum SN15] Length = 301 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDGDSPTEYVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|302495960|ref|XP_003009992.1| hypothetical protein ARB_03803 [Arthroderma benhamiae CBS 112371] gi|291173517|gb|EFE29347.1| hypothetical protein ARB_03803 [Arthroderma benhamiae CBS 112371] Length = 288 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|257076314|ref|ZP_05570675.1| 30S ribosomal protein S2 [Ferroplasma acidarmanus fer1] Length = 200 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 50/208 (24%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +SG+ G + + + M+RYIF RN+ +I+D+ +T L +A ++++ + +IL Sbjct: 15 KSGIHIGTQ--VKSKDMDRYIFKIRNDGLYILDIKKTNHALIEAGKMLARY--QPEQILV 70 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 VA + A V + ++ + +++ G +TN +L+ N + Sbjct: 71 VAQRQYAFKPVAKFSEIVGSSSIIGRFIPGTLTN-----------PNLKSYYNAK----- 114 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 ++ + D + A++EA R+ IP++++ D N Sbjct: 115 -----------------------------VILITDPLADTQAMKEAIRIGIPVISLCDAN 145 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + D VD +IP N+ S+A+ L++ Sbjct: 146 NKTDFVDLIIPTNNKGRMSLAVIYWLLS 173 >gi|149241133|ref|XP_001526275.1| 40S ribosomal protein S0 [Lodderomyces elongisporus NRRL YB-4239] gi|229891589|sp|A5DZP6|RSSA_LODEL RecName: Full=40S ribosomal protein S0 gi|146450398|gb|EDK44654.1| 40S ribosomal protein S0 [Lodderomyces elongisporus NRRL YB-4239] Length = 261 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|260945895|ref|XP_002617245.1| 40S ribosomal protein S0-A [Clavispora lusitaniae ATCC 42720] gi|269969647|sp|C4Y2C6|RSSA_CLAL4 RecName: Full=40S ribosomal protein S0 gi|238849099|gb|EEQ38563.1| 40S ribosomal protein S0-A [Clavispora lusitaniae ATCC 42720] Length = 263 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRTDAQAIKESSYVNIPVIALSDVDSPSEYVDVAIPCNNKGKHSIGLIWWLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|320584134|gb|EFW98345.1| 40S ribosomal protein S0 [Pichia angusta DL-1] Length = 265 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+VD +S + +D IP N+ S L L+ Sbjct: 115 PRLIIVTDPRTDAQAIKESSYVNIPVIALVDCDSPAEYIDVAIPCNNKGKHSTGLIWWLL 174 Query: 219 A 219 A Sbjct: 175 A 175 >gi|4809047|gb|AAD30064.1|AF133210_1 laminin receptor precursor-like protein/ p40 ribosome associated-like protein [Trypanosoma cruzi] Length = 298 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D ++ A +EA + IP++A DT++ + VD IP ND SI++ L+ Sbjct: 139 PRVLLVTDPRTDQQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYWLL 198 Query: 219 A 219 A Sbjct: 199 A 199 >gi|209573704|sp|Q46CL0|RS2_METBF RecName: Full=30S ribosomal protein S2P Length = 225 Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + ++EA + +PIVA+ DTN+ VD VIP N+ ++++L L+ Sbjct: 143 PDIVIVTDPAGDAQVLKEASSIGVPIVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLL 202 Query: 219 A 219 A Sbjct: 203 A 203 >gi|302656727|ref|XP_003020115.1| hypothetical protein TRV_05889 [Trichophyton verrucosum HKI 0517] gi|291183896|gb|EFE39491.1| hypothetical protein TRV_05889 [Trichophyton verrucosum HKI 0517] Length = 289 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|73668947|ref|YP_304962.1| 30S ribosomal protein S2 [Methanosarcina barkeri str. Fusaro] gi|72396109|gb|AAZ70382.1| SSU ribosomal protein S2P [Methanosarcina barkeri str. Fusaro] Length = 247 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + ++EA + +PIVA+ DTN+ VD VIP N+ ++++L L+ Sbjct: 165 PDIVIVTDPAGDAQVLKEASSIGVPIVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLL 224 Query: 219 A 219 A Sbjct: 225 A 225 >gi|119719192|ref|YP_919687.1| 30S ribosomal protein S2 [Thermofilum pendens Hrk 5] gi|209573784|sp|A1RWV4|RS2_THEPD RecName: Full=30S ribosomal protein S2P gi|119524312|gb|ABL77684.1| SSU ribosomal protein S2P [Thermofilum pendens Hrk 5] Length = 214 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 37/60 (61%) Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DLM V D ++ A+ EA + IP++A+ DT+S VD +IP N+ +++AL L+A Sbjct: 121 DLMMVTDPRVDEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLA 180 >gi|91774302|ref|YP_566994.1| 30S ribosomal protein S2 [Methanococcoides burtonii DSM 6242] gi|121686578|sp|Q12TI2|RS2_METBU RecName: Full=30S ribosomal protein S2P gi|91713317|gb|ABE53244.1| SSU ribosomal protein S2P [Methanococcoides burtonii DSM 6242] Length = 214 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + I+EA + IP+VA+ DTN+ VD VIP N+ ++++L L+ Sbjct: 132 PDVVIVTDPAGDAQVIREAVNVGIPVVALCDTNNMTSNVDLVIPTNNKGRKALSLVYWLL 191 Query: 219 A 219 A Sbjct: 192 A 192 >gi|50261299|ref|YP_052907.1| ribosomal protein S2 [Saprolegnia ferax] gi|48237612|gb|AAT40661.1| ribosomal protein S2 [Saprolegnia ferax] Length = 198 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 53/196 (27%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVIS---------DTVARGGRILFVATKSQASDCV 82 +I+ R+N II+L T+ LQKAL +I + I F+ ++S+ + Sbjct: 41 FIYGFRHNYSIINLKATIFFLQKALFLIKLCIKKNKKILIIGDSFDIKFLLSESKKINF- 99 Query: 83 MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKR 142 K N W+ G++TN KTVS F K ++N+ Sbjct: 100 --TQKNKNIILKNDIWINGLLTN-KTVS------------------NFLKHNKINL---- 134 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIP 202 ++ + +E + E IPI+ + +TNSN D ++Y I Sbjct: 135 ------------------IILLKSKTKENYLLTEFNHKNIPIITLNNTNSNIDYINYPIF 176 Query: 203 GNDDSSRSIALFCDLV 218 N + +S+ L+ Sbjct: 177 SNTKNLKSLFFLIYLI 192 >gi|312221376|emb|CBY01316.1| hypothetical protein [Leptosphaeria maculans] Length = 300 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDGDSPTEYVDVAIPTNNKGRHAIGLIWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|68482743|ref|XP_714681.1| likely cytosolic ribosomal protein S0 [Candida albicans SC5314] gi|46436269|gb|EAK95634.1| likely cytosolic ribosomal protein S0 [Candida albicans SC5314] Length = 217 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 74 PRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLL 133 Query: 219 A 219 A Sbjct: 134 A 134 >gi|298705166|emb|CBJ28597.1| conserved unknown protein [Ectocarpus siliculosus] Length = 350 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I ++L + V G RN + +M+ YI+ R + HI+++ +T L A ++I + Sbjct: 17 IHKMLAAQVHIGTRNS--DSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIV-AIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A+ + + ++ G TN Q ++ R+ Sbjct: 74 QDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTN-----QITKQFRE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + A++EA + +P++A Sbjct: 121 --------------------------------PRLLIITDPRPDAQAVKEASYVNVPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D++S VD IP N+ SI L L+A Sbjct: 149 FCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLA 181 >gi|74664714|sp|Q96VK7|RSSA_CANTR RecName: Full=40S ribosomal protein S0 gi|15020801|emb|CAC44623.1| ribosomal protein [Candida tropicalis] Length = 261 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|326474343|gb|EGD98352.1| 40S ribosomal protein S0 [Trichophyton tonsurans CBS 112818] gi|326482504|gb|EGE06514.1| 40S ribosomal protein S0 [Trichophyton equinum CBS 127.97] Length = 289 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|308487826|ref|XP_003106108.1| CRE-RPS-0 protein [Caenorhabditis remanei] gi|308254682|gb|EFO98634.1| CRE-RPS-0 protein [Caenorhabditis remanei] Length = 276 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ + D + A+ EA + +P+++ V+T S L+D +P N+ RSI L ++ Sbjct: 119 PRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWML 178 Query: 219 ASAAI---DGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 A + I+RQ ++ D K + ++ + E++ + + V + QE Sbjct: 179 AREILILRGKISRQTGFV-LDGKEIMPDLYFYRDPTETEKEETGAHAEVTETQE 231 >gi|254550634|ref|ZP_05141081.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 45 Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Query: 43 IDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS 89 +DL QT+ + KA + + +TVA GG +LFV TK QA + V AA R+ Sbjct: 1 MDLQQTLTFIDKAYEFVKETVAHGGSVLFVGTKKQAQESV--AASRT 45 >gi|242398340|ref|YP_002993764.1| 30S ribosomal protein S2P [Thermococcus sibiricus MM 739] gi|242264733|gb|ACS89415.1| 30S ribosomal protein S2P [Thermococcus sibiricus MM 739] Length = 204 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 34/55 (61%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 PD++ V D + A++EA + IP+VA+VDT + VD IP N+ +S+AL Sbjct: 114 PDVLVVTDPRADHQAMKEAIDIGIPVVALVDTENLLSYVDLAIPTNNKGRKSLAL 168 >gi|296824064|ref|XP_002850542.1| 40S ribosomal protein S0 [Arthroderma otae CBS 113480] gi|269969651|sp|C5FD74|RSSA_NANOT RecName: Full=40S ribosomal protein S0 gi|238838096|gb|EEQ27758.1| 40S ribosomal protein S0 [Arthroderma otae CBS 113480] Length = 290 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|229462742|sp|O42817|RSSA_CANAL RecName: Full=40S ribosomal protein S0 gi|269969627|sp|C4YNR7|RSSA_CANAW RecName: Full=40S ribosomal protein S0 gi|7270973|emb|CAB77627.1| YST1 protein [Candida albicans] gi|238880938|gb|EEQ44576.1| 40S ribosomal protein S0-A [Candida albicans WO-1] Length = 261 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|254566987|ref|XP_002490604.1| Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp [Pichia pastoris GS115] gi|269969659|sp|C4QYK0|RSSA_PICPG RecName: Full=40S ribosomal protein S0 gi|238030400|emb|CAY68323.1| Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp [Pichia pastoris GS115] gi|328350992|emb|CCA37392.1| 40S ribosomal protein S0 [Pichia pastoris CBS 7435] Length = 263 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IPI+A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLIIVTDPRTDSQAIKESSYVNIPIIALTDMDSPSEFVDVAIPCNNKGKHSIGLIWYLL 177 Query: 219 A 219 + Sbjct: 178 S 178 >gi|124023217|ref|YP_001017524.1| N-acetylmuramic acid-6-phosphate etherase [Prochlorococcus marinus str. MIT 9303] gi|166231081|sp|A2C9U9|MURQ_PROM3 RecName: Full=N-acetylmuramic acid 6-phosphate etherase; Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic acid 6-phosphate hydrolase; AltName: Full=N-acetylmuramic acid 6-phosphate lyase gi|123963503|gb|ABM78259.1| Predicted sugar phosphate isomerase [Prochlorococcus marinus str. MIT 9303] Length = 316 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 3/107 (2%) Query: 33 IFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQY 92 +FCE + ++ +P L +A++ I+D + GGR+ ++ + V++AA+ + Sbjct: 42 LFCEEDREPQRAVAAAIPELIQAVEAITDRLRSGGRLFYLGAGTSGRLGVLDAAECPPTF 101 Query: 93 CVNSKWLGGMMTNWKT-VSQSIQKLRDLEELLNKENQ--GFTKKERL 136 C + + G++ + + +S + L D+E+ K+ Q GF+ + L Sbjct: 102 CSDPDLVQGVLAGGSSALLKSSEGLEDIEQAGQKDLQQRGFSSADCL 148 >gi|315055725|ref|XP_003177237.1| 40S ribosomal protein S0 [Arthroderma gypseum CBS 118893] gi|311339083|gb|EFQ98285.1| 40S ribosomal protein S0 [Arthroderma gypseum CBS 118893] Length = 289 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|322491106|emb|CBZ26371.1| putative 40S ribosomal protein SA [Leishmania mexicana MHOM/GT/2001/U1103] Length = 246 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+EA + IP++A+ DT++ + VD IP N+ +SI + L+ Sbjct: 122 PRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|322491095|emb|CBZ26360.1| putative 40S ribosomal protein SA [Leishmania mexicana MHOM/GT/2001/U1103] Length = 246 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+EA + IP++A+ DT++ + VD IP N+ +SI + L+ Sbjct: 122 PRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|146104702|ref|XP_001469893.1| 40S ribosomal protein SA [Leishmania infantum] gi|146104747|ref|XP_001469903.1| 40S ribosomal protein SA [Leishmania infantum] gi|229891588|sp|A4IDS4|RSSA_LEIIN RecName: Full=40S ribosomal protein SA gi|134074263|emb|CAM73007.1| putative 40S ribosomal protein SA [Leishmania infantum JPCM5] gi|134074273|emb|CAM73018.1| putative 40S ribosomal protein SA [Leishmania infantum JPCM5] Length = 246 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+EA + IP++A+ DT++ + VD IP N+ +SI + L+ Sbjct: 122 PRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|157877540|ref|XP_001687087.1| 40S ribosomal protein SA [Leishmania major strain Friedlin] gi|157877562|ref|XP_001687098.1| 40S ribosomal protein SA [Leishmania major strain Friedlin] gi|75030566|sp|Q4Q0Q0|RSSA_LEIMA RecName: Full=40S ribosomal protein SA gi|68130162|emb|CAJ09473.1| putative 40S ribosomal protein SA [Leishmania major strain Friedlin] gi|68130173|emb|CAJ09484.1| putative 40S ribosomal protein SA [Leishmania major strain Friedlin] Length = 246 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+EA + IP++A+ DT++ + VD IP N+ +SI + L+ Sbjct: 122 PRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|302766523|ref|XP_002966682.1| hypothetical protein SELMODRAFT_36118 [Selaginella moellendorffii] gi|302792579|ref|XP_002978055.1| hypothetical protein SELMODRAFT_36138 [Selaginella moellendorffii] gi|300154076|gb|EFJ20712.1| hypothetical protein SELMODRAFT_36138 [Selaginella moellendorffii] gi|300166102|gb|EFJ32709.1| hypothetical protein SELMODRAFT_36118 [Selaginella moellendorffii] Length = 213 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L S V G +N + +MERY++ R++ II++ +T LQ A +VI + Sbjct: 9 IQMMLASAVHLGTKNC--DFQMERYVWKRRSDGIFIINVGKTWEKLQLAARVIVG-IENP 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN +L N Sbjct: 66 HDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTN---------------QLQNSF 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++ P L+ + D + I+EA IP++A Sbjct: 111 SE------------------------------PRLLILTDPRTDHQPIKEAALGNIPVIA 140 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI ++A Sbjct: 141 FCDTDSPMKYVDIAIPANNKGKHSIGCLFWMLA 173 >gi|40716462|gb|AAR88769.1| DMRT1 isoform e [Gallus gallus] Length = 228 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 18/130 (13%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ + S+ L ++ Sbjct: 51 PRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWML 110 Query: 219 ASAAI---DGIARQHSY--------------MGADTKSAGETVVHSKEGMQLEEDSQSSE 261 A + I+R+H + + + ++A E V +KE Q E + + E Sbjct: 111 AREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAV-TKEEFQTEWTAPAPE 169 Query: 262 SSVLDGQEVA 271 + EVA Sbjct: 170 FTAPPQPEVA 179 >gi|311713|emb|CAA29348.1| rps2 [Pisum sativum] Length = 52 Score = 43.1 bits (100), Expect = 0.048, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 27/44 (61%) Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 1 IPTICLIDTNCDPDLADMSIPANDDAIASIRLILNKLVFAICEG 44 >gi|66826691|ref|XP_646700.1| 40S ribosomal protein SA [Dictyostelium discoideum AX4] gi|74858259|sp|Q55BY1|RSSA_DICDI RecName: Full=40S ribosomal protein SA gi|60474571|gb|EAL72508.1| 40S ribosomal protein SA [Dictyostelium discoideum AX4] Length = 245 Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTH-IIDLSQTVPMLQKALQVISDTVARG 66 I ++L G N + +ME Y + ++N H II+L++T +Q A +VI + Sbjct: 15 ILKMLACQTHLGGNNV--DVEMESYTWKRKDNGHFIINLAKTWEKIQLAARVIV-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ K V++ A + ++ G TN IQ Sbjct: 72 ADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTN------QIQ------------ 113 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 FT+ P L+ V D +K + EA + IP +A Sbjct: 114 -SKFTE--------------------------PRLLIVADPLLDKQPLMEASYVNIPTIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DT S D VD IP N+ SIAL L+A Sbjct: 147 LCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLA 179 >gi|294655441|ref|XP_457580.2| DEHA2B14564p [Debaryomyces hansenii CBS767] gi|199429959|emb|CAG85591.2| DEHA2B14564p [Debaryomyces hansenii] Length = 257 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 43/212 (20%), Positives = 84/212 (39%), Gaps = 53/212 (25%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N ++ Y++ R + ++I++ +T + A ++I+ + Sbjct: 15 KLLLAANVHLGSKN------VQPYVYKTRPDGVNVINVGKTWEKIVLAARIIA-AIPNAA 67 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + +T++ V++ A + + ++ G TN+ T R +E Sbjct: 68 DVAVCSTRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYIT--------RSFKE------ 113 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 114 -------------------------------PRLVVVTDPRTDFQAIKESSYVNIPVIAL 142 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D +S + VD IP N+ SI L LVA Sbjct: 143 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLVA 174 >gi|189192641|ref|XP_001932659.1| 40S ribosomal protein SA [Pyrenophora tritici-repentis Pt-1C-BFP] gi|330916768|ref|XP_003297553.1| hypothetical protein PTT_07993 [Pyrenophora teres f. teres 0-1] gi|229891609|sp|B2VY36|RSSA_PYRTR RecName: Full=40S ribosomal protein S0 gi|187978223|gb|EDU44849.1| 40S ribosomal protein SA [Pyrenophora tritici-repentis Pt-1C-BFP] gi|311329712|gb|EFQ94353.1| hypothetical protein PTT_07993 [Pyrenophora teres f. teres 0-1] Length = 300 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLVIVTDPRTDAQAIKEASYVNIPVIALCDGDSPTEYVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|71406749|ref|XP_805888.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|70869468|gb|EAN84037.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] Length = 138 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++FV D + A++EA + IP++A DT++ + VD IP N+ SI++ L+ Sbjct: 15 PRVLFVTDPRTDHQALREASLVNIPVIAFCDTDAPLEFVDIAIPCNNRGRYSISMMYWLL 74 Query: 219 A 219 A Sbjct: 75 A 75 >gi|320165423|gb|EFW42322.1| 40S ribosomal protein SA [Capsaspora owczarzaki ATCC 30864] Length = 302 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL + V G +N +M Y++ R + H+I+L +T + A ++I V Sbjct: 45 IQKLLAANVHLGAKNV--EQQMLSYVYKRRIDGIHLINLHKTWEKIVLAARIIV-AVENP 101 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ ++ +++ A + + ++ G TN + Sbjct: 102 ADVAVISARTYGQRAILKFAAHTGAQSIAGRFTPGTFTN--------------------Q 141 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 Q K+ P ++ V D + AI+EA + IPI+A Sbjct: 142 IQAAFKE-------------------------PRVLIVTDPRADHQAIREAAYVNIPIIA 176 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ +++ L L+A Sbjct: 177 FCDTDSPLRYVDVAIPCNNKAAQPTGLIWWLLA 209 >gi|225706622|gb|ACO09157.1| 40S ribosomal protein SA [Osmerus mordax] Length = 312 Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust. Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 52/229 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 + + L +G G N + +ME Y++ +++ HII+L +T L A + I + Sbjct: 15 VLKFLAAGTHLGGTNV--DFQMEHYVYKRKSDGVHIINLKKTWEKLLLAARAIV-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + +++++ V++ A S + ++ G TN Q R+ Sbjct: 72 ADVCVISSRNTGQRAVLKFASASGATTFHGRFTPGTFTN-----QIQAAFRE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + + EA + IP +A Sbjct: 119 --------------------------------PRLLIVTDPRADHQPLTEASYVNIPTIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI---DGIARQHSY 232 + +T+S VD IP N+ S+ L ++A + I+R+H + Sbjct: 147 MCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPW 195 >gi|284165815|ref|YP_003404094.1| ribosomal protein S2 [Haloterrigena turkmenica DSM 5511] gi|284015470|gb|ADB61421.1| ribosomal protein S2 [Haloterrigena turkmenica DSM 5511] Length = 269 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 47/82 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ +++++ L+ Sbjct: 187 PDVLVVTDPIGDAQAVKEAITVGIPVIAMCDSNNQVSNVDLVVPTNNKGRKALSVVYWLL 246 Query: 219 ASAAIDGIARQHSYMGADTKSA 240 A+ +D + SY D +S Sbjct: 247 ANEVLDRRGAEPSYSLDDFESG 268 >gi|282164311|ref|YP_003356696.1| 30S ribosomal protein S2P [Methanocella paludicola SANAE] gi|282156625|dbj|BAI61713.1| 30S ribosomal protein S2P [Methanocella paludicola SANAE] Length = 211 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 39/65 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A+ EA ++ +P++A+ DTN+ +D VIP N+ +++AL L+ Sbjct: 128 PDVVVVTDPIGDMQAVNEAIKIGVPVIAMCDTNNMTTDIDLVIPTNNKGRKALALVYWLL 187 Query: 219 ASAAI 223 A + Sbjct: 188 AREVV 192 >gi|74659472|sp|Q6BW39|RSSA_DEBHA RecName: Full=40S ribosomal protein S0 Length = 261 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L LV Sbjct: 118 PRLVVVTDPRTDFQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLV 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|327307012|ref|XP_003238197.1| 40S ribosomal protein S0 [Trichophyton rubrum CBS 118892] gi|326458453|gb|EGD83906.1| 40S ribosomal protein S0 [Trichophyton rubrum CBS 118892] Length = 289 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I L ++ Sbjct: 121 PRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|126697324|gb|ABO26619.1| raminin receptor [Haliotis discus discus] Length = 324 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A+ +T+S VD IP N+ ++SI L L+ Sbjct: 119 PRLLVVTDPRIDHQPVTEASYVNIPVIALCNTDSPLRYVDIAIPCNNKGAQSIGLMWWLM 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRLRGTISREHQW 195 >gi|156845807|ref|XP_001645793.1| hypothetical protein Kpol_1010p51 [Vanderwaltozyma polyspora DSM 70294] gi|229891575|sp|A7TIJ7|RSSA2_VANPO RecName: Full=40S ribosomal protein S0-B gi|156116461|gb|EDO17935.1| hypothetical protein Kpol_1010p51 [Vanderwaltozyma polyspora DSM 70294] Length = 251 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLIIVTDPRSDFQAIKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|289580114|ref|YP_003478580.1| ribosomal protein S2 [Natrialba magadii ATCC 43099] gi|289529667|gb|ADD04018.1| ribosomal protein S2 [Natrialba magadii ATCC 43099] Length = 263 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 47/82 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ +++++ L+ Sbjct: 181 PDVVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNQVSNVDLVVPTNNKGRKALSVVYWLL 240 Query: 219 ASAAIDGIARQHSYMGADTKSA 240 A+ +D + SY D +S Sbjct: 241 ANEVLDRRGAEPSYSLEDFESG 262 >gi|41615290|ref|NP_963788.1| 30S ribosomal protein S2 [Nanoarchaeum equitans Kin4-M] gi|74579664|sp|Q74M65|RS2_NANEQ RecName: Full=30S ribosomal protein S2P gi|40069014|gb|AAR39349.1| NEQ508 [Nanoarchaeum equitans Kin4-M] Length = 201 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ + D +K A+ +A I I+A+ DTN + +D+ IP N+ S+S+AL ++ Sbjct: 110 PEVILITDPIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWIL 169 Query: 219 A 219 A Sbjct: 170 A 170 >gi|67624811|ref|XP_668688.1| ribosomal protein S2 [Cryptosporidium hominis TU502] gi|75002627|sp|Q5CPC9|RSSA_CRYHO RecName: Full=40S ribosomal protein SA gi|54659892|gb|EAL38453.1| ribosomal protein S2 [Cryptosporidium hominis] gi|323509441|dbj|BAJ77613.1| cgd3_2090 [Cryptosporidium parvum] gi|323510093|dbj|BAJ77940.1| cgd3_2090 [Cryptosporidium parvum] Length = 256 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ E+ IP++A+ DT+S VD IP N+ SIAL L+ Sbjct: 116 PRLLIVTDPRVDSQAVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLL 175 Query: 219 A 219 A Sbjct: 176 A 176 >gi|326366194|gb|ADZ54790.1| 40S ribosomal protein S0 [Candida orthopsilosis] Length = 205 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+ Sbjct: 118 PRLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|20089489|ref|NP_615564.1| 30S ribosomal protein S2 [Methanosarcina acetivorans C2A] gi|19914396|gb|AAM04044.1| ribosomal protein S2p [Methanosarcina acetivorans C2A] Length = 247 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + ++EA + +P+VA+ DTN+ VD VIP N+ ++++L L+ Sbjct: 165 PDVIIVTDPAGDAQVLKEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLL 224 Query: 219 A 219 A Sbjct: 225 A 225 >gi|66359200|ref|XP_626778.1| 40S ribosomal protein SAe [Cryptosporidium parvum Iowa II] gi|46228372|gb|EAK89271.1| 40S ribosomal protein SAe [Cryptosporidium parvum Iowa II] Length = 260 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ E+ IP++A+ DT+S VD IP N+ SIAL L+ Sbjct: 120 PRLLIVTDPRVDSQAVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLL 179 Query: 219 A 219 A Sbjct: 180 A 180 >gi|23822120|sp|Q8TT39|RS2_METAC RecName: Full=30S ribosomal protein S2P Length = 225 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + ++EA + +P+VA+ DTN+ VD VIP N+ ++++L L+ Sbjct: 143 PDVIIVTDPAGDAQVLKEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLL 202 Query: 219 A 219 A Sbjct: 203 A 203 >gi|308081909|ref|NP_001007824.1| 40S ribosomal protein SA [Gallus gallus] gi|326922143|ref|XP_003207311.1| PREDICTED: 40S ribosomal protein SA-like [Meleagris gallopavo] gi|1710781|sp|P50890|RSSA_CHICK RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|1149509|emb|CAA64147.1| 37kD Laminin receptor precursor /p40 ribosomal associated protein [Gallus gallus] Length = 296 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 18/130 (13%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ + S+ L ++ Sbjct: 119 PRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY--------------MGADTKSAGETVVHSKEGMQLEEDSQSSE 261 A + I+R+H + + + ++A E V +KE Q E + + E Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAV-TKEEFQTEWTAPAPE 237 Query: 262 SSVLDGQEVA 271 + EVA Sbjct: 238 FTAPPQPEVA 247 >gi|147921496|ref|YP_684689.1| 30S ribosomal protein S2 [uncultured methanogenic archaeon RC-I] gi|121683244|sp|Q0W8D0|RS2_UNCMA RecName: Full=30S ribosomal protein S2P gi|110620085|emb|CAJ35363.1| 30S ribosomal protein S2P [uncultured methanogenic archaeon RC-I] Length = 207 Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A+ EA + +P+VA+ DTN+ +D VIP N+ +++AL L+ Sbjct: 124 PDVVVVTDPIGDAQAVTEAISIGVPVVAMCDTNNMTSNIDLVIPTNNKGRKALALVYWLL 183 Query: 219 A 219 A Sbjct: 184 A 184 >gi|209880367|ref|XP_002141623.1| 40S ribosomal protein SA [Cryptosporidium muris RN66] gi|209557229|gb|EEA07274.1| 40S ribosomal protein SA, putative [Cryptosporidium muris RN66] Length = 257 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ E+ IP++A+ DT+S VD IP N+ SIAL L+ Sbjct: 116 PRLLIVTDPRVDSQAVIESSYANIPVIALCDTDSPLQYVDVAIPCNNKGKESIALMYYLL 175 Query: 219 A 219 A Sbjct: 176 A 176 >gi|1039443|gb|AAB02772.1| putative ribosome-associated protein [Neurospora crassa] Length = 293 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +IA ++ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDADSPTEYVDVAIPTNNKGRHAIACVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|307352918|ref|YP_003893969.1| 30S ribosomal protein S2 [Methanoplanus petrolearius DSM 11571] gi|307156151|gb|ADN35531.1| ribosomal protein S2 [Methanoplanus petrolearius DSM 11571] Length = 203 Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ V D + AI EA + +P+VA+ DTN+ +D VIP N+ ++++L L+ Sbjct: 121 PEVVIVTDPIGDSQAINEAVQCGVPVVALCDTNNITKYIDLVIPTNNKGRKALSLIYYLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|307179455|gb|EFN67779.1| 40S ribosomal protein SA [Camponotus floridanus] Length = 312 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 51/222 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER---NNTHIIDLSQTVPMLQKALQ 57 +AL + + ++L +G G N N +ME+Y++ +R ++I+L T L A + Sbjct: 8 LALKEDDVTKMLAAGTHLGAENV--NFQMEQYVYKKRVDGAGVNVINLRHTWEKLLLAAR 65 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 I + + ++ + V++ A + + ++ G TN Q R Sbjct: 66 AIV-AIEHPSEVFVISCRHSGQRAVLKFAAHTGATPIAGRFTPGAFTN-----QIQAAFR 119 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + P L+ V D + + I EA Sbjct: 120 E----------------------------------------PRLLIVTDPSTDHQPITEA 139 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S VD IP N S ++ L L+A Sbjct: 140 SYVNIPVIAFCNTDSPLRFVDIAIPCNTKSLHTVGLMWWLLA 181 >gi|224045519|ref|XP_002198906.1| PREDICTED: putative laminin receptor 1 [Taeniopygia guttata] gi|229891612|sp|B5FXT6|RSSA_TAEGU RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|197127349|gb|ACH43847.1| putative laminin receptor 1 [Taeniopygia guttata] gi|197127351|gb|ACH43849.1| putative laminin receptor 1 [Taeniopygia guttata] gi|197127352|gb|ACH43850.1| putative laminin receptor 1 [Taeniopygia guttata] gi|296399394|gb|ADH10516.1| ribosomal protein SA [Zonotrichia albicollis] gi|296399428|gb|ADH10545.1| ribosomal protein SA [Zonotrichia albicollis] Length = 296 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 18/130 (13%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ + S+ L ++ Sbjct: 119 PRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY--------------MGADTKSAGETVVHSKEGMQLEEDSQSSE 261 A + I+R+H + + + ++A E V +KE Q E + + E Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAV-TKEEFQTEWTAPAPE 237 Query: 262 SSVLDGQEVA 271 + EVA Sbjct: 238 FTAPPQPEVA 247 >gi|195457346|ref|XP_002075534.1| GK14587 [Drosophila willistoni] gi|229891617|sp|B4NPT0|RSSA_DROWI RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|194171619|gb|EDW86520.1| GK14587 [Drosophila willistoni] Length = 270 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +II+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNIINLGKTWEKLVLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Q R+ Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTN-----QIQPAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + I EA Sbjct: 119 ---------------------------------------PRLLVVTDPMTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S +D IP N+ S SI L L+A Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLA 179 >gi|218678964|ref|ZP_03526861.1| hypothetical protein RetlC8_08799 [Rhizobium etli CIAT 894] Length = 40 Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 19/33 (57%), Positives = 27/33 (81%), Gaps = 2/33 (6%) Query: 165 VDTNREKLAIQEARRLRIPIVAVVDTN--SNPD 195 +DTN+EK+AI EA+RL IP+VA++D+ S PD Sbjct: 2 IDTNKEKIAIDEAKRLGIPVVAIIDSKLRSGPD 34 >gi|15214300|sp|Q9ZSR8|RSSA_BRANA RecName: Full=40S ribosomal protein SA; AltName: Full=Laminin receptor-like protein; AltName: Full=p40 gi|3769681|gb|AAC97937.1| laminin receptor-like protein [Brassica napus] Length = 292 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I+ + + V G +N N +MERY+F RN+ +I +L +T L A +VI Sbjct: 16 IKMMCAAEVHLGTKNC--NYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVI------- 66 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 VA ++ D ++++A+ Q V + T + +I N+ Sbjct: 67 -----VAIEN-PQDIIVQSARPYGQRAV-------LKFAQYTGANAIAGRHTPGTFTNQM 113 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I+E IPI+A Sbjct: 114 QTSFSE--------------------------PRLLILTDPRTDHQPIKEGALGNIPIIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 148 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLA 180 >gi|12231015|sp|O59295|RS2_PYRHO RecName: Full=30S ribosomal protein S2P Length = 202 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ + D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 112 PEVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWIL 171 Query: 219 A 219 A Sbjct: 172 A 172 >gi|74025154|ref|XP_829143.1| 40S ribosomal protein SA [Trypanosoma brucei TREU927] gi|70834529|gb|EAN80031.1| 40S ribosomal protein SA, putative [Trypanosoma brucei] gi|261335096|emb|CBH18090.1| 40S ribosomal protein SA, putative [Trypanosoma brucei gambiense DAL972] gi|261335109|emb|CBH18103.1| 40S ribosomal protein SA, putative [Trypanosoma brucei gambiense DAL972] Length = 244 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + A++EA + IP++A DT++ + VD IP N+ SI++ L+ Sbjct: 122 PRVLVVTDPRTDHQALREASLVNIPVIAFCDTDAPLEFVDIAIPCNNRGRHSISMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|166952385|gb|ABZ04275.1| ribosomal protein rpsA [Lineus viridis] Length = 240 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + +QEA + IP++A+ +T+S VD IP N+ SI L ++ Sbjct: 119 PRLLVVTDPRTDHQPVQEASYVNIPVIALCNTDSPLKYVDIAIPCNNKGPHSIGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|145549468|ref|XP_001460413.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428243|emb|CAK93016.1| unnamed protein product [Paramecium tetraurelia] Length = 268 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 45/214 (21%), Positives = 97/214 (45%), Gaps = 47/214 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I++L+ S G + ++ M+RY+ +N ++I++L +T ++ A +VI+ + + Sbjct: 40 IKRLIASQCHVGTKQLHFD--MKRYVSHRSDNGSYILNLEETWQHIKLAARVIA-AIEQP 96 Query: 67 GRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+++ V++ A + A +++W G +TN QS N Sbjct: 97 QDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTN-----QS-----------NS 140 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + F + P L+ V D + ++ AI EA + IP++ Sbjct: 141 ASGKFQE--------------------------PQLLIVTDPHLDRQAIVEASYVNIPVI 174 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+ ++++ VD IP + ++SI++ L+A Sbjct: 175 ALTNSDTPLQYVDIPIPVGNRETKSISMIYWLLA 208 >gi|33862978|ref|NP_894538.1| N-acetylmuramic acid-6-phosphate etherase [Prochlorococcus marinus str. MIT 9313] gi|81577640|sp|Q7V7N4|MURQ_PROMM RecName: Full=N-acetylmuramic acid 6-phosphate etherase; Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic acid 6-phosphate hydrolase; AltName: Full=N-acetylmuramic acid 6-phosphate lyase gi|33634895|emb|CAE20881.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 316 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 33 IFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQY 92 +FCE + ++ +P L +A++ I+D + GGR+ ++ + V++AA+ + Sbjct: 42 LFCEEDREPQRAVAAAIPELIQAVEAITDRLRSGGRLFYLGAGTSGRLGVLDAAECPPTF 101 Query: 93 CVNSKWLGGMMTNWK-TVSQSIQKLRDLEELLNKE 126 C + + G++ + +S + L D+E+L K+ Sbjct: 102 CSDPDLVQGVLAGGSAALLKSSEGLEDIEQLGKKD 136 >gi|74025178|ref|XP_829155.1| 40S ribosomal protein SA [Trypanosoma brucei TREU927] gi|70834541|gb|EAN80043.1| 40S ribosomal protein SA, putative [Trypanosoma brucei] Length = 277 Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + A++EA + IP++A DT++ + VD IP N+ SI++ L+ Sbjct: 155 PRVLVVTDPRTDHQALREASLVNIPVIAFCDTDAPLEFVDIAIPCNNRGRHSISMMYWLL 214 Query: 219 A 219 A Sbjct: 215 A 215 >gi|322369527|ref|ZP_08044092.1| 30S ribosomal protein S2 [Haladaptatus paucihalophilus DX253] gi|320551259|gb|EFW92908.1| 30S ribosomal protein S2 [Haladaptatus paucihalophilus DX253] Length = 259 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 48/81 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N++ VD V+P N+ +++++ L+ Sbjct: 177 PDVVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNSTSNVDLVVPTNNKGRKALSVVYWLL 236 Query: 219 ASAAIDGIARQHSYMGADTKS 239 A+ +D + +Y D +S Sbjct: 237 ANETLDRRGAEPTYSLDDFES 257 >gi|14591402|ref|NP_143481.1| 30S ribosomal protein S2 [Pyrococcus horikoshii OT3] gi|3258058|dbj|BAA30741.1| 205aa long hypothetical 30S ribosomal protein S2 [Pyrococcus horikoshii OT3] Length = 205 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ + D + A++EA + IPIVA+VDT + VD IP N+ +++AL ++ Sbjct: 115 PEVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRKALALIYWIL 174 Query: 219 A 219 A Sbjct: 175 A 175 >gi|145537035|ref|XP_001454234.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145553453|ref|XP_001462401.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124421989|emb|CAK86837.1| unnamed protein product [Paramecium tetraurelia] gi|124430240|emb|CAK95028.1| unnamed protein product [Paramecium tetraurelia] Length = 238 Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust. Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 47/221 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 M+ + I++L+ S G + ++ K RY+ +N +I++L +T ++ A +VI Sbjct: 1 MSRKEQDIKRLIASQCHIGTKQLHFDQK--RYVSHRSDNGAYILNLEETWQHIKLAARVI 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 + V + ++ V+++ V++ A + A +++W G +TN QS Sbjct: 59 A-AVEQPQDVMVVSSRPIGQRAVIKFAHYTHASSTRSARWTPGTLTN-----QS------ 106 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 N + F + P L+ V D + +K AI EA Sbjct: 107 -----NSASGKFQE--------------------------PQLLIVTDPHLDKQAIVEAS 135 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A+ ++++ VD IP + ++SI++ L+A Sbjct: 136 YVNIPVIALCNSDNPLQYVDIPIPVGNRETKSISMIYWLLA 176 >gi|17554768|ref|NP_497978.1| Ribosomal Protein, Small subunit family member (rps-0) [Caenorhabditis elegans] gi|1173295|sp|P46769|RSSA_CAEEL RecName: Full=40S ribosomal protein SA gi|3873741|emb|CAA86061.1| C. elegans protein B0393.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 276 Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 4/114 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ + D + A+ EA + +P+++ V+T S L+D +P N+ RSI L ++ Sbjct: 119 PRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWML 178 Query: 219 ASAAI---DGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 A + I+RQ ++ + K + ++ + E++ + + V + QE Sbjct: 179 AREILILRGKISRQTGFV-LEGKEIMPDLYFYRDPTETEKEETGAHADVAEAQE 231 >gi|76802066|ref|YP_327074.1| 30S ribosomal protein S2 [Natronomonas pharaonis DSM 2160] gi|121717528|sp|Q3IQS9|RS2_NATPD RecName: Full=30S ribosomal protein S2P gi|76557931|emb|CAI49515.1| ribosomal protein S2 [Natronomonas pharaonis DSM 2160] Length = 277 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 44/74 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ +++++ L+ Sbjct: 195 PDVVVVTDPIGDSQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVIYWLL 254 Query: 219 ASAAIDGIARQHSY 232 A+ +D + +Y Sbjct: 255 ANETLDRRGAEPAY 268 >gi|298674292|ref|YP_003726042.1| 30S ribosomal protein S2 [Methanohalobium evestigatum Z-7303] gi|298287280|gb|ADI73246.1| ribosomal protein S2 [Methanohalobium evestigatum Z-7303] Length = 236 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 40/78 (51%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P++ V D + I+E+ + +P+VA DTN+ VD VIP N+ ++++L L+ Sbjct: 154 PEVTLVTDPTGDAQVIKESVNVGVPVVAFCDTNNQTSSVDLVIPTNNKGRKALSLVYWLL 213 Query: 219 ASAAIDGIARQHSYMGAD 236 A + +Y +D Sbjct: 214 AKEVAKNMGIPFNYEFSD 231 >gi|148233658|ref|NP_001089106.1| 40S ribosomal protein SA [Xenopus laevis] gi|123918051|sp|Q3ZM03|RSSA_XENLA RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|58003510|gb|AAW62261.1| 67kD laminin receptor precursor [Xenopus laevis] gi|114108053|gb|AAI23145.1| LOC733335 protein [Xenopus laevis] Length = 306 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 46/229 (20%), Positives = 89/229 (38%), Gaps = 52/229 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 + + L +G G N + +ME+YI+ +++ +II+L +T L A + I + Sbjct: 15 VLKFLAAGTHLGGTNL--DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + +++++ V++ A S + ++ G TN Q R+ Sbjct: 72 ADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTN-----QIQAAFRE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + I EA + IP +A Sbjct: 119 --------------------------------PRLLVVTDPRADHQPITEASYVNIPTIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI---DGIARQHSY 232 + +T+S VD IP N+ + S+ L ++A + I+R+H + Sbjct: 147 LCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPW 195 >gi|71403370|ref|XP_804492.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|71406414|ref|XP_805747.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|70867494|gb|EAN82641.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] gi|70869274|gb|EAN83896.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] gi|322828975|gb|EFZ32562.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] Length = 245 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + A++EA + IP++A DT++ + VD IP N+ SI++ L+ Sbjct: 122 PRVLLVTDPRTDHQALREASLVNIPVIAFCDTDAPLEFVDIAIPCNNRGRYSISMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|71402795|ref|XP_804266.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|70867145|gb|EAN82415.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] Length = 245 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + A++EA + IP++A DT++ + VD IP N+ SI++ L+ Sbjct: 122 PRVLLVTDPRTDHQALREASLVNIPVIAFCDTDAPLEFVDIAIPCNNRGRYSISMMYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|730682|sp|P38980|RSSA_TRIGR RecName: Full=40S ribosomal protein SA gi|476090|gb|AAA90977.1| 34/67 kD laminin binding protein [Tripneustes gratilla] Length = 316 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 42/214 (19%), Positives = 83/214 (38%), Gaps = 49/214 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + +++ L SG G N + +M +Y++ + + T+II+L +T L A ++I Sbjct: 8 LALKEDDVQKFLASGAHIGSSNL--DYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ + + ++ G TN Q R+ Sbjct: 66 V-AIENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTN-----QIQAAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + + EA Sbjct: 119 ---------------------------------------PRILIVTDPRSDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 + IP++A+ +T+S VD IP N+ S SI L Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKSIHSIGL 173 >gi|162606370|ref|XP_001713215.1| 40S ribosomal protein SSA [Guillardia theta] gi|12580681|emb|CAC26999.1| 40S ribosomal protein SSA [Guillardia theta] Length = 199 Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P L+ + D +K A+ EA + IP+++V +T+S +D IPGN+ S AL Sbjct: 112 PRLLIISDPLLDKQALLEASYVNIPVISVCNTDSFLSYIDIAIPGNNKDRYSFAL 166 >gi|330508375|ref|YP_004384803.1| 30S ribosomal protein S2 [Methanosaeta concilii GP-6] gi|328929183|gb|AEB68985.1| ribosomal protein S2 [Methanosaeta concilii GP-6] Length = 206 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ D + + A+ EA + IP++A+ DTN+ VD VIP N+ +++ L L+ Sbjct: 122 PDVIIATDPSGDAQAVNEAVDVGIPVIALCDTNNMTSNVDLVIPTNNKGRKALTLIYWLL 181 Query: 219 A 219 A Sbjct: 182 A 182 >gi|229891605|sp|A3RLT6|RSSA_PINFU RecName: Full=40S ribosomal protein SA gi|126362082|gb|ABO10190.1| 67kD laminin receptor precursor [Pinctada fucata] Length = 301 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A+ +T+S VD IP N+ S S+ L L+ Sbjct: 119 PRLLVVTDPRIDHQPVTEASYVNIPVIALCNTDSPLRYVDVAIPCNNKSVHSVGLMWWLL 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R H + Sbjct: 179 AREVLRLRGTISRDHPW 195 >gi|226474636|emb|CAX77565.1| stubarista [Schistosoma japonicum] gi|226474640|emb|CAX77567.1| stubarista [Schistosoma japonicum] gi|226474646|emb|CAX77570.1| stubarista [Schistosoma japonicum] Length = 279 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P++A+ +T+S VD VIP N+ S+ SIA+ + Sbjct: 119 PRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|56462168|gb|AAV91367.1| hypothetical protein 14 [Lonomia obliqua] Length = 264 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V+D ++ I EA + IP++A+ +T+S VD P N SS SI L L+ Sbjct: 79 PRLLIVLDPAQDHQPITEASNVNIPVIALCNTDSPLRFVDIANPCNTKSSHSIGLMWWLL 138 Query: 219 A 219 A Sbjct: 139 A 139 >gi|170059457|ref|XP_001865372.1| 40S ribosomal protein SA [Culex quinquefasciatus] gi|167878238|gb|EDS41621.1| 40S ribosomal protein SA [Culex quinquefasciatus] Length = 282 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A +T+S VD IP N S SI L L+ Sbjct: 111 PRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNTKSPHSIGLMWWLL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|292656891|ref|YP_003536788.1| 30S ribosomal protein S2 [Haloferax volcanii DS2] gi|291370311|gb|ADE02538.1| ribosomal protein S2 [Haloferax volcanii DS2] Length = 260 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 41/66 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ R++++ L+ Sbjct: 178 PDVVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNQTSNVDLVVPTNNKGRRALSVVYWLL 237 Query: 219 ASAAID 224 A+ +D Sbjct: 238 ANETLD 243 >gi|226474642|emb|CAX77568.1| stubarista [Schistosoma japonicum] Length = 279 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P++A+ +T+S VD VIP N+ S+ SIA+ + Sbjct: 119 PRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|215259533|gb|ACJ64258.1| 40S ribosomal protein SA [Culex tarsalis] Length = 257 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A +T+S VD IP N S SI L L+ Sbjct: 84 PRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNTKSPHSIGLMWWLL 143 Query: 219 A 219 A Sbjct: 144 A 144 >gi|8574697|gb|AAF77664.1|AF193931_1 mitochondrial protein [Magnolia grandiflora] Length = 110 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 36/139 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R + +N F ++ PD + ++D +R+ Sbjct: 55 PKKIRSRNKKIN-----FGSNQQ-----------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN 191 I EA R +IPI + VD+N Sbjct: 87 VILEADRSQIPIASSVDSN 105 >gi|164660494|ref|XP_001731370.1| hypothetical protein MGL_1553 [Malassezia globosa CBS 7966] gi|229891592|sp|A8PXY6|RSSA_MALGO RecName: Full=40S ribosomal protein S0 gi|159105270|gb|EDP44156.1| hypothetical protein MGL_1553 [Malassezia globosa CBS 7966] Length = 290 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 34/60 (56%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+E+ + IP++A+ DT++ VD IPGN+ SI L L+ Sbjct: 120 PRVIVVTDPRVDHQAIRESAYVNIPVIALCDTDAPLRHVDIAIPGNNKGRHSIGLLWWLL 179 >gi|74900189|sp|Q5DA90|RSSA_SCHJA RecName: Full=40S ribosomal protein SA gi|56758252|gb|AAW27266.1| SJCHGC06078 protein [Schistosoma japonicum] gi|226474238|emb|CAX71605.1| stubarista [Schistosoma japonicum] gi|226474626|emb|CAX77560.1| stubarista [Schistosoma japonicum] gi|226474628|emb|CAX77561.1| stubarista [Schistosoma japonicum] gi|226474630|emb|CAX77562.1| stubarista [Schistosoma japonicum] gi|226474634|emb|CAX77564.1| stubarista [Schistosoma japonicum] gi|226474638|emb|CAX77566.1| stubarista [Schistosoma japonicum] gi|226474644|emb|CAX77569.1| stubarista [Schistosoma japonicum] gi|226474648|emb|CAX77571.1| stubarista [Schistosoma japonicum] gi|226474650|emb|CAX77572.1| stubarista [Schistosoma japonicum] gi|226474652|emb|CAX77573.1| stubarista [Schistosoma japonicum] gi|226474654|emb|CAX77574.1| stubarista [Schistosoma japonicum] gi|226474656|emb|CAX77575.1| stubarista [Schistosoma japonicum] Length = 279 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P++A+ +T+S VD VIP N+ S+ SIA+ + Sbjct: 119 PRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|21227862|ref|NP_633784.1| 30S ribosomal protein S2 [Methanosarcina mazei Go1] gi|23822119|sp|Q8PW41|RS2_METMA RecName: Full=30S ribosomal protein S2P gi|20906276|gb|AAM31456.1| SSU ribosomal protein S2P [Methanosarcina mazei Go1] Length = 224 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + ++EA + +P++A+ DTN+ VD VIP N+ ++++L L+ Sbjct: 142 PDVIIVTDPAGDAQVLKEASSIGVPVIALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLL 201 Query: 219 A 219 A Sbjct: 202 A 202 >gi|242013672|ref|XP_002427526.1| 40S ribosomal protein SA, putative [Pediculus humanus corporis] gi|212511928|gb|EEB14788.1| 40S ribosomal protein SA, putative [Pediculus humanus corporis] Length = 288 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + I EA + IP++A +T+S VD IP N+ + SI L L+ Sbjct: 119 PRLLIVTDPQTDHQPITEASYVNIPVIAFCNTDSPLRFVDIAIPCNNKAPHSIGLMWWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|226474240|emb|CAX71606.1| stubarista [Schistosoma japonicum] Length = 279 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P++A+ +T+S VD VIP N+ S+ SIA+ + Sbjct: 119 PRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|313126010|ref|YP_004036280.1| SSU ribosomal protein s2p [Halogeometricum borinquense DSM 11551] gi|312292375|gb|ADQ66835.1| SSU ribosomal protein S2P [Halogeometricum borinquense DSM 11551] Length = 268 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 41/66 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ R++++ L+ Sbjct: 186 PDVVVVTDPIGDSQAVKEAITVGIPVIAMCDSNNQTSNVDLVVPTNNKGRRALSVVYWLL 245 Query: 219 ASAAID 224 A+ +D Sbjct: 246 ANETLD 251 >gi|55377006|ref|YP_134856.1| 30S ribosomal protein S2 [Haloarcula marismortui ATCC 43049] gi|57015337|sp|P29202|RS2_HALMA RecName: Full=30S ribosomal protein S2P; AltName: Full=HS2; AltName: Full=ORFMSG gi|55229731|gb|AAV45150.1| 30S ribosomal protein S2P [Haloarcula marismortui ATCC 43049] Length = 267 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 44/74 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ +++++ L+ Sbjct: 185 PDIVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLL 244 Query: 219 ASAAIDGIARQHSY 232 A+ +D + +Y Sbjct: 245 ANETLDRRGAEPTY 258 >gi|148782|gb|AAA73102.1| put. membrane protein; putative [Haloarcula marismortui] Length = 266 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 44/74 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ +++++ L+ Sbjct: 184 PDIVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLL 243 Query: 219 ASAAIDGIARQHSY 232 A+ +D + +Y Sbjct: 244 ANETLDRRGAEPTY 257 >gi|323650220|gb|ADX97196.1| 40S ribosomal protein SA [Perca flavescens] Length = 245 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLGYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|327278514|ref|XP_003224007.1| PREDICTED: 40S ribosomal protein SA-like [Anolis carolinensis] Length = 296 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 18/130 (13%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ + S+ L ++ Sbjct: 119 PRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY--------------MGADTKSAGETVVHSKEGMQLEEDSQSSE 261 A + I+R+H + + + ++A E V +KE Q E + + E Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAV-TKEEFQGEWTAPAPE 237 Query: 262 SSVLDGQEVA 271 + EVA Sbjct: 238 FTAPPQPEVA 247 >gi|308235004|ref|ZP_07665741.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14018] Length = 35 Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 26/35 (74%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER 37 + Q T+ ++L++G+ FGH+ WNPKM+++I +R Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQR 35 >gi|85082069|ref|XP_956840.1| 40S ribosomal protein S0 [Neurospora crassa OR74A] gi|30316337|sp|Q01291|RS0_NEUCR RecName: Full=40S ribosomal protein S0; AltName: Full=Ribosome-associated protein 1 gi|18376365|emb|CAD21142.1| ribosome-associated protein (Rap-1) [Neurospora crassa] gi|28917919|gb|EAA27604.1| 40S ribosomal protein S0 [Neurospora crassa OR74A] Length = 290 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I ++ Sbjct: 121 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDADSPTEYVDVAIPTNNKGRHAIGCVWWML 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|332024006|gb|EGI64224.1| 40S ribosomal protein SA [Acromyrmex echinatior] Length = 300 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + I EA + IP++A +T+S VD IP N S ++ L L+ Sbjct: 110 PRLLIVTDPSTDHQPITEASYVNIPVIAFCNTDSPLRFVDIAIPCNTKSLHTVGLMWWLL 169 Query: 219 A 219 A Sbjct: 170 A 170 >gi|222480238|ref|YP_002566475.1| ribosomal protein S2 [Halorubrum lacusprofundi ATCC 49239] gi|222453140|gb|ACM57405.1| ribosomal protein S2 [Halorubrum lacusprofundi ATCC 49239] Length = 268 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 41/66 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD VIP N+ R++++ L+ Sbjct: 186 PDVVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNQLSNVDLVIPTNNKGRRALSVVYWLL 245 Query: 219 ASAAID 224 A+ +D Sbjct: 246 ANETLD 251 >gi|8574681|gb|AAF77656.1|AF193923_1 mitochondrial protein [Peperomia argyreia] Length = 138 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 39/158 (24%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR V T S + + + A + C+N S+W +GG +TN + Sbjct: 1 ACHFIGSPIRQKGRSFIVNTNSLFDEIIEQMATKIG--CINDSQWRIGGFLTNCSS---- 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD--TNRE 170 R R K L+ I+ PD + ++D T + Sbjct: 55 --------------------------PRSRKKNACQLNSIKGSNQQPDCVVIMDAETINK 88 Query: 171 KLAIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA RL+IPI + VD+N + + Y IP ND Sbjct: 89 SSVILEADRLQIPIASSVDSNMPLGSYKRITYPIPAND 126 >gi|317575807|ref|NP_001187066.1| 40S ribosomal protein SA [Ictalurus punctatus] gi|82217273|sp|Q90YS4|RSSA_ICTPU RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|15294011|gb|AAK95182.1|AF402808_1 40S ribosomal protein Sa [Ictalurus punctatus] Length = 317 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|229891760|sp|Q01CH5|RSSA_OSTTA RecName: Full=40S ribosomal protein SA Length = 287 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I +L +G G +N + +MERY++ R + HII+L +T L A +VI V Sbjct: 12 IAMMLAAGCHLGTKNV--DFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIV-AVENP 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ A + V++ A+ + + + G TN Sbjct: 69 QDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTN--------------------- 107 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +K+ + E P ++ V D + I E + IP +A Sbjct: 108 -----QKDAVFAE-------------------PRVLVVTDPRTDAQPISETAFVNIPTIA 143 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ + +SI L+A Sbjct: 144 FCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLA 176 >gi|237862666|gb|ACR24958.1| ribosomal protein SA [Lepidochitona cinerea] Length = 217 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A+ +T+S VD IP N+ SI L L+ Sbjct: 113 PRLLVVTDPRTDHQPVTEASYVNIPVIALCNTDSPLRYVDIAIPCNNKGIHSIGLMWWLL 172 Query: 219 ASAAI---DGIARQHSY 232 A + I+R H + Sbjct: 173 AREVLRLRGSISRDHPW 189 >gi|257388639|ref|YP_003178412.1| 30S ribosomal protein S2 [Halomicrobium mukohataei DSM 12286] gi|257170946|gb|ACV48705.1| ribosomal protein S2 [Halomicrobium mukohataei DSM 12286] Length = 259 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 46/81 (56%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD V+P N+ +++++ L+ Sbjct: 177 PDVVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTANVDLVVPTNNKGRKALSVVYWLL 236 Query: 219 ASAAIDGIARQHSYMGADTKS 239 A+ +D Y AD +S Sbjct: 237 ANETLDRRGSDTVYELADFES 257 >gi|289614764|emb|CBI58488.1| unnamed protein product [Sordaria macrospora] Length = 264 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+EA + IP++A+ D +S + VD IP N+ +I ++ Sbjct: 95 PRLIIVTDPRTDAQAIKEASYVNIPVIALCDADSPTEYVDVAIPTNNKGRHAIGCVWWML 154 Query: 219 A 219 A Sbjct: 155 A 155 >gi|330818775|ref|XP_003291514.1| 40S ribosomal protein SA [Dictyostelium purpureum] gi|325078320|gb|EGC31978.1| 40S ribosomal protein SA [Dictyostelium purpureum] Length = 244 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D ++ + EA + IP +A+ DT+S D VD IP N+ SIAL L+ Sbjct: 119 PRLLIVADPLLDRQPLIEASYVNIPTIALCDTSSCLDGVDIAIPCNNRGKNSIALMFWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|159154157|gb|ABW93480.1| putative ribosomal protein SA [Barentsia elongata] Length = 252 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P L+ V D + ++EA + IP++A +T+S VD IP N+ S SI L Sbjct: 96 PRLLVVTDPRVDHQPVKEASYVNIPVIAFCNTDSPLRFVDIAIPCNNKSEHSIGL 150 >gi|2910999|emb|CAA72242.1| YST protein [Candida albicans] Length = 253 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI+E+ + IP++A+ D S + VD IP N+ I L L+ Sbjct: 118 PRLVVVTDPRTDAQAIKESSYVNIPVIALTDMQSPSEYVDVAIPCNNKGKHCIGLIWWLL 177 Query: 219 A 219 A Sbjct: 178 A 178 >gi|45360789|ref|NP_989068.1| 40S ribosomal protein SA [Xenopus (Silurana) tropicalis] gi|82202482|sp|Q6P8D1|RSSA_XENTR RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|38174038|gb|AAH61298.1| ribosomal protein SA [Xenopus (Silurana) tropicalis] gi|89272463|emb|CAJ82410.1| ribosomal protein SA [Xenopus (Silurana) tropicalis] gi|197246801|gb|AAI68799.1| ribosomal protein SA [Xenopus (Silurana) tropicalis] Length = 306 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ + S+ L ++ Sbjct: 119 PRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|300711104|ref|YP_003736918.1| 30S ribosomal protein S2 [Halalkalicoccus jeotgali B3] gi|299124787|gb|ADJ15126.1| 30S ribosomal protein S2 [Halalkalicoccus jeotgali B3] Length = 271 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 41/66 (62%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A+ EA + IP++A+ D+N++ VD VIP N+ +++++ L+ Sbjct: 189 PDVVVVTDPIGDAQAVTEAITVGIPVIAMCDSNNSTSNVDLVIPTNNKGRKALSVVYWLL 248 Query: 219 ASAAID 224 A+ +D Sbjct: 249 ANETLD 254 >gi|147902645|ref|NP_001080730.1| ribosomal protein SA [Xenopus laevis] gi|28277316|gb|AAH46271.1| Lamr1-prov protein [Xenopus laevis] Length = 306 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 52/229 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 + + L +G G N + +ME+YI+ +++ +II+L +T L A + I + Sbjct: 15 VLKFLAAGTHLGGTNL--DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + +++++ V++ A S + ++ G TN Q R+ Sbjct: 72 ADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTN-----QIQAAFRE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + + EA + IP +A Sbjct: 119 --------------------------------PRLLVVTDPRADHQPLTEASYVNIPTIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI---DGIARQHSY 232 + +T+S VD IP N+ + S+ L ++A + I+R+H + Sbjct: 147 LCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPW 195 >gi|229891611|sp|A2Q0U8|RSSA_SOLSE RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|124300851|dbj|BAF45921.1| ribosomal protein Sa [Solea senegalensis] Length = 313 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLLVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|229891758|sp|Q4QY71|RSSA_SPAAU RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 Length = 304 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|48476439|gb|AAT44424.1| 40S ribosomal protein Sa-like protein [Sparus aurata] Length = 294 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 21/138 (15%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY--------------MGADTKSAGETVVHSKEGMQLEEDSQSSE 261 A + I+R+H + + + ++A E V KE Q E + ++E Sbjct: 179 AREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAV-GKEEFQGEWSAPAAE 237 Query: 262 SS---VLDGQEVAVVPEL 276 + V D E VP + Sbjct: 238 FTQPEVADWSEGVAVPSV 255 >gi|308801849|ref|XP_003078238.1| B1056G08.113 gene product (ISS) [Ostreococcus tauri] gi|116056689|emb|CAL52978.1| B1056G08.113 gene product (ISS) [Ostreococcus tauri] Length = 313 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I +L +G G +N + +MERY++ R + HII+L +T L A +VI V Sbjct: 38 IAMMLAAGCHLGTKNV--DFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIV-AVENP 94 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ A + V++ A+ + + + G TN Sbjct: 95 QDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTN--------------------- 133 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +K+ + E P ++ V D + I E + IP +A Sbjct: 134 -----QKDAVFAE-------------------PRVLVVTDPRTDAQPISETAFVNIPTIA 169 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ + +SI L+A Sbjct: 170 FCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLA 202 >gi|114654607|ref|XP_510146.2| PREDICTED: hypothetical protein [Pan troglodytes] Length = 260 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + +P +A+ +T+S VD IP N+ +RS+ L + Sbjct: 119 PRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGARSVGLMWWTL 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|226474632|emb|CAX77563.1| stubarista [Schistosoma japonicum] Length = 181 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P++A+ +T+S VD VIP N+ S+ SIA+ + Sbjct: 21 PRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFL 80 Query: 219 A 219 A Sbjct: 81 A 81 >gi|8574673|gb|AAF77652.1|AF193919_1 mitochondrial protein [Nelumbo nucifera] Length = 110 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 36/139 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLLDEIMEQMATRIG--CINDSQWRIGGFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R + +N F ++ PD + ++D +R+ Sbjct: 55 PKKIRSRNKKIN-----FGSNQQ-----------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN 191 I EA R +IPI + VD+N Sbjct: 87 VILEADRSQIPIASSVDSN 105 >gi|20095014|ref|NP_614861.1| 30S ribosomal protein S2 [Methanopyrus kandleri AV19] gi|23822121|sp|Q8TV23|RS2_METKA RecName: Full=30S ribosomal protein S2P gi|19888277|gb|AAM02791.1| Ribosomal protein S2 [Methanopyrus kandleri AV19] Length = 203 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 50/222 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L +GV G + ME +I+ R + H+ID+ +T ++ A +S + Sbjct: 11 LNDYLAAGVHIGTQQ--KTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANFLS--MYNT 66 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + A+ + + +++ G +TN E Sbjct: 67 DEILVVSRRYYGQKPVSKFAEATGTTAIPGRFVPGTLTN-------------------PE 107 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 G+ + P+++ + D + A+ EA+ + IPIVA Sbjct: 108 YDGYLE--------------------------PEVIVLTDPRADFQALVEAQSVGIPIVA 141 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 + DT++ VD IP N+ +++AL L+A + + R Sbjct: 142 LCDTDNFTGNVDLAIPTNNKGRKALALVYWLLARELLKKLGR 183 >gi|41054972|ref|NP_957346.1| 40S ribosomal protein SA [Danio rerio] gi|82210121|sp|Q803F6|RSSA_DANRE RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|27882337|gb|AAH44504.1| Ribosomal protein SA [Danio rerio] gi|37362236|gb|AAQ91246.1| laminin receptor 1 [Danio rerio] gi|38541297|gb|AAH62859.1| Ribosomal protein SA [Danio rerio] gi|182888692|gb|AAI64084.1| Rpsa protein [Danio rerio] Length = 308 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|255710099|gb|ACU30869.1| 40S ribosomal protein SA (P40) [Ochlerotatus triseriatus] Length = 191 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A +T+S VD IP N+ S SI L L+ Sbjct: 19 PRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSIGLMWWLL 78 Query: 219 A 219 A Sbjct: 79 A 79 >gi|111572543|gb|ABH10628.1| laminin receptor [Litopenaeus vannamei] Length = 320 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D ++ I EA + IP++A +T+S VD IP N+ S SI L ++ Sbjct: 119 PRLLVVTDPISDRQPITEASYVSIPVIAFCNTDSPLRYVDIAIPCNNRSPHSIGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|322797859|gb|EFZ19764.1| hypothetical protein SINV_14378 [Solenopsis invicta] Length = 262 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + I EA + IP++A +T+S VD IP N S ++ L L+ Sbjct: 168 PRLLIVTDPSTDHQPITEASYVNIPVIAFCNTDSPLRFVDIAIPCNTKSLHTVGLMWWLL 227 Query: 219 A 219 A Sbjct: 228 A 228 >gi|168021317|ref|XP_001763188.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685671|gb|EDQ72065.1| predicted protein [Physcomitrella patens subsp. patens] Length = 305 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 81/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 ++ +L + V G +N + +MERY++ R++ II++ +T L+ A +VI Sbjct: 7 VQMMLAADVHLGTKNC--DFQMERYVWKRRSDGIFIINVGKTYEKLELAARVI------- 57 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 A D ++++A+ Q V + T Q+I N+ Sbjct: 58 ------AAIENPQDIIVQSARPYGQRAV-------LKFAQYTGCQAIAGRHTPGTFTNQL 104 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I EA IP++A Sbjct: 105 QNTFSE--------------------------PRLLILTDPRTDHQPIMEAALGNIPVIA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 139 FCDTDSPMKYVDIAIPANNKGKHSIGALFWLLA 171 >gi|66524293|ref|XP_393965.2| PREDICTED: 40S ribosomal protein SA [Apis mellifera] Length = 310 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + I EA + IP++A +T+S VD IP N S + L L+ Sbjct: 119 PRLLIVTDPSTDHQPITEASYVNIPVIAFCNTDSPLRFVDIAIPCNTKSLHCVGLMWWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|156548613|ref|XP_001608082.1| PREDICTED: similar to putative 40S ribosomal protein SA [Nasonia vitripennis] Length = 317 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + I EA + IP++A +T+S VD IP N+ S+ L L+ Sbjct: 121 PRLLIVTDPATDHQPITEASYVNIPVIAFCNTDSPLRFVDIAIPCNNKGPHSVGLMWWLL 180 Query: 219 A 219 A Sbjct: 181 A 181 >gi|260598847|ref|YP_003211418.1| transketolase [Cronobacter turicensis z3032] gi|260218024|emb|CBA32718.1| Transketolase 2 [Cronobacter turicensis z3032] Length = 664 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 10/111 (9%) Query: 130 FTKKERLNIERKRDKLKRALDG---IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +++ IER +LK G ++D GG PDL+ + + ++A+Q A +LR VA Sbjct: 517 LSRQNLAQIERSPQQLKEVARGGYILKDAGGKPDLILIATGSEVEIAVQAAEQLRGDGVA 576 Query: 187 V-VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID-GIA-RQHSYMG 234 V V + + D+ D D++ R L D+ A A++ GIA + Y+G Sbjct: 577 VRVVSLPSTDVFD----AQDEAYRESVLPSDVSARVAVEAGIADYWYKYVG 623 >gi|168043403|ref|XP_001774174.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674442|gb|EDQ60950.1| predicted protein [Physcomitrella patens subsp. patens] Length = 278 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 81/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 ++ +L + V G +N + +MERY++ R++ II++ +T L+ A +VI Sbjct: 4 VQMMLAADVHLGTKNC--DFQMERYVWKRRSDGIFIINVGKTYEKLELAARVI------- 54 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 A D ++++A+ Q V + T Q+I N+ Sbjct: 55 ------AAIENPQDIIVQSARPYGQRAV-------LKFAQYTGCQAIAGRHTPGTFTNQL 101 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F++ P L+ + D + I EA IP++A Sbjct: 102 QNTFSE--------------------------PRLLILTDPRTDHQPIMEAALGNIPVIA 135 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 136 FCDTDSPMKYVDIAIPANNKGKHSIGALFWLLA 168 >gi|168017628|ref|XP_001761349.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687355|gb|EDQ73738.1| predicted protein [Physcomitrella patens subsp. patens] Length = 292 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 ++ +L + V G +N + +MERY++ R++ II++ +T L+ A +VI+ + Sbjct: 6 VQMMLAADVHLGTKNC--DFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIA-AIENP 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN +L N Sbjct: 63 QDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTN---------------QLQNTF 107 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++ P L+ + D + I EA IP++A Sbjct: 108 SE------------------------------PRLLILTDPRTDHQPIMEAALGNIPVIA 137 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 138 FCDTDSPMKYVDIAIPANNKGKHSIGALFWLLA 170 >gi|168048391|ref|XP_001776650.1| predicted protein [Physcomitrella patens subsp. patens] gi|168048465|ref|XP_001776687.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671942|gb|EDQ58486.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671979|gb|EDQ58523.1| predicted protein [Physcomitrella patens subsp. patens] Length = 292 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 ++ +L + V G +N + +MERY++ R++ II++ +T L+ A +VI+ + Sbjct: 6 VQMMLAADVHLGTKNC--DFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIA-AIENP 62 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN +L N Sbjct: 63 QDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTN---------------QLQNTF 107 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++ P L+ + D + I EA IP++A Sbjct: 108 SE------------------------------PRLLILTDPRTDHQPIMEAALGNIPVIA 137 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT+S VD IP N+ SI L+A Sbjct: 138 FCDTDSPMKYVDIAIPANNKGKHSIGALFWLLA 170 >gi|294496195|ref|YP_003542688.1| 30S ribosomal protein S2P [Methanohalophilus mahii DSM 5219] gi|292667194|gb|ADE37043.1| SSU ribosomal protein S2P [Methanohalophilus mahii DSM 5219] Length = 242 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD + V D + I+EA + IP++ + DTN+ VD VIP N+ ++++L L+ Sbjct: 160 PDAIMVTDPAGDAQVIKEAVNIGIPVIGLCDTNNMISNVDLVIPTNNKGRKALSLIYWLL 219 Query: 219 A 219 A Sbjct: 220 A 220 >gi|218514370|ref|ZP_03511210.1| 30S ribosomal protein S2 [Rhizobium etli 8C-3] Length = 46 Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 19/36 (52%), Positives = 26/36 (72%) Query: 210 SIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +IAL+C+L++ AAIDGIARQ S G D ++ E V Sbjct: 1 AIALYCELISRAAIDGIARQQSSSGRDLGASSEVPV 36 >gi|257053578|ref|YP_003131411.1| 30S ribosomal protein S2 [Halorhabdus utahensis DSM 12940] gi|256692341|gb|ACV12678.1| ribosomal protein S2 [Halorhabdus utahensis DSM 12940] Length = 267 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 48/81 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ VD ++P N+ +++++ L+ Sbjct: 185 PDVVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTGNVDLIVPTNNKGRKALSVVYWLL 244 Query: 219 ASAAIDGIARQHSYMGADTKS 239 A+ +D + +Y +D +S Sbjct: 245 ANETLDRRGAKPAYSLSDFES 265 >gi|156932985|ref|YP_001436901.1| transketolase [Cronobacter sakazakii ATCC BAA-894] gi|156531239|gb|ABU76065.1| hypothetical protein ESA_00788 [Cronobacter sakazakii ATCC BAA-894] Length = 668 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 10/111 (9%) Query: 130 FTKKERLNIERKRDKLKRALDG---IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +++ IER +LK G ++D GG PDL+ + + ++A+Q A +LR VA Sbjct: 521 LSRQNLAQIERSPQQLKDVARGGYILKDAGGKPDLILIATGSEVEIAVQAAEKLRGDGVA 580 Query: 187 V-VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID-GIA-RQHSYMG 234 V V + + D+ D D++ R L D+ A A++ GIA + Y+G Sbjct: 581 VRVVSLPSTDVFD----AQDEAYRESVLPSDVSARVAVEAGIADYWYKYVG 627 >gi|296190805|ref|XP_002743353.1| PREDICTED: 40S ribosomal protein SA-like [Callithrix jacchus] Length = 294 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + +A + +P +A+ +TNS VD IP N+ + S+ L ++ Sbjct: 119 PRLLVVTDPRADHQPLTKASYVNLPTIALCNTNSPLRYVDIAIPYNNKGAHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 A + I+R+H + Sbjct: 179 AREVLRMRGTISREHPW 195 >gi|122125804|sp|Q4KTE2|RSSA_SUBDO RecName: Full=40S ribosomal protein SA gi|61654700|gb|AAX48876.1| SA [Suberites domuncula] Length = 325 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 49/212 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 + +LL +G G N + +M +Y+F + + II++ +T L A +VI+ + Sbjct: 15 VTKLLAAGTHLGDSNV--DIQMAQYVFKTKGDGVPIINVRKTWEKLLLAARVIA-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + +A K +++ A + + + ++ G TN IQK Sbjct: 72 ADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTN------QIQK----------- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 R+ P L+ V D + I EA + IP++A Sbjct: 115 ------------------------AFRE----PRLLIVSDARSDHQPITEAAYVNIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +TNS +D IP N+ S+ L L+ Sbjct: 147 FCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLL 178 >gi|730683|sp|P38981|RSSA_URECA RecName: Full=40S ribosomal protein SA; AltName: Full=Laminin-binding protein p40; Short=LBP/p40 gi|476088|gb|AAA90978.1| 34/67 kD laminin binding protein [Urechis caupo] Length = 317 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A+ +T+S VD IP N+ S S+ L ++ Sbjct: 119 PRLLVVTDPYTDHQPVTEASYVNIPVIALTNTDSPLKYVDIAIPCNNKSIHSVGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|110668827|ref|YP_658638.1| 30S ribosomal protein S2 [Haloquadratum walsbyi DSM 16790] gi|121687162|sp|Q18G63|RS2_HALWD RecName: Full=30S ribosomal protein S2P gi|109626574|emb|CAJ53038.1| ribosomal protein S2 [Haloquadratum walsbyi DSM 16790] Length = 279 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 40/66 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 PD++ V D + A++EA + IP++A+ D+N+ D V+P N+ R++++ L+ Sbjct: 197 PDVVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNQTSNTDLVVPTNNKGRRALSVVYWLL 256 Query: 219 ASAAID 224 A+ +D Sbjct: 257 ANETLD 262 >gi|161899531|ref|XP_001712991.1| ribosomal RNA S0 [Bigelowiella natans] gi|75756486|gb|ABA27379.1| ribosomal RNA S0 [Bigelowiella natans] Length = 211 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 34/62 (54%) Query: 158 LPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 LP+ V + + I+E + IPI+ + +T++N +D+V+P N +S S A+ L Sbjct: 110 LPEAAIVAEPKNDPRIIRELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIFYL 169 Query: 218 VA 219 + Sbjct: 170 IG 171 >gi|71022107|ref|XP_761284.1| hypothetical protein UM05137.1 [Ustilago maydis 521] gi|74700003|sp|Q4P426|RSSA_USTMA RecName: Full=40S ribosomal protein S0 gi|46097778|gb|EAK83011.1| hypothetical protein UM05137.1 [Ustilago maydis 521] Length = 276 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 32/60 (53%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI+EA + IP ++ VD++S VD IPGN S+ L L+ Sbjct: 119 PRVIVVTDPRVDHQAIREASYVNIPCISFVDSDSPLKFVDVAIPGNVRGRHSVGLLWWLL 178 >gi|326694054|gb|AEA03300.1| Rps2 [Populus alba] gi|326694058|gb|AEA03303.1| Rps2 [Populus deltoides] gi|326694060|gb|AEA03304.1| Rps2 [Populus tremula] gi|326694063|gb|AEA03306.1| Rps2 [Populus tremuloides] gi|326694066|gb|AEA03308.1| Rps2 [Populus nigra] gi|326694069|gb|AEA03310.1| Rps2 [Populus maximowiczii] Length = 40 Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 21/30 (70%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER 37 ++++LE+GV FGH WNPKM YI +R Sbjct: 10 LKEMLETGVHFGHATRKWNPKMAPYISAKR 39 >gi|268323601|emb|CBH37189.1| 30S ribosomal protein S2P [uncultured archaeon] Length = 217 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D ++ A++E +PIVA+ DTN++ +D++IP N+ +++A L+ Sbjct: 117 PAILVVTDPMTDEQALREGVAAGLPIVALCDTNNSTSELDFIIPTNNKGRKALATVYWLL 176 Query: 219 A 219 A Sbjct: 177 A 177 >gi|188572456|gb|ACD65134.1| putative 40S ribosomal protein RPSA [Phoronis muelleri] Length = 217 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D ++ I EA + IP++A+ +T+S VD IP N+ SI L+ Sbjct: 119 PRLLIVTDPRQDHQPITEASYVNIPVIALCNTDSPLRYVDIAIPCNNKGVHSIGFMWYLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|256066167|ref|XP_002570487.1| ribosomal protein S2 eukaryotic and archaeal form [Schistosoma mansoni] gi|227299159|emb|CAY18007.1| ribosomal protein S2, eukaryotic and archaeal form, putative [Schistosoma mansoni] Length = 301 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P++A +T+ VD VIP N+ S SIA+ L+ Sbjct: 141 PRLLVVSDPLSDHQAVYEANSVNVPLIAFCNTDVPLSRVDIVIPCNNKSRHSIAVVWWLL 200 Query: 219 A 219 A Sbjct: 201 A 201 >gi|324518583|gb|ADY47146.1| 40S ribosomal protein SA [Ascaris suum] Length = 312 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S VD IP N+ +SI L ++ Sbjct: 132 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWML 191 Query: 219 A 219 A Sbjct: 192 A 192 >gi|8574685|gb|AAF77658.1|AF193925_1 mitochondrial protein [Amborella trichopoda] Length = 134 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A + C+ KW +G +TN S Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATKIG--CIKYKKWRIGAFLTN----CSS 54 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+ ++K+++N + PD + +++ +RE Sbjct: 55 PKKI-------------CSRKKKINFGSNQQ---------------PDCVVIMNADRESS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA RL+IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRLQIPIASSVDSNIPLESYKRITYPIPAND 122 >gi|8574693|gb|AAF77662.1|AF193929_1 mitochondrial protein [Polyalthia suberosa] Length = 134 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 39/156 (25%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIG--CINDSQWRIGGFLTNCSSPKKI 58 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 + + + N++ PD + ++D +R+ Sbjct: 59 RSRKKKINFGSNQQ--------------------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI + VD+N + + Y IP ND Sbjct: 87 VILEADRSQIPIASSVDSNIPLGSHKRITYPIPAND 122 >gi|269146876|gb|ACZ28384.1| 40S ribosomal protein SA [Simulium nigrimanum] Length = 212 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP++A +T+S VD IP N S+ SI L + Sbjct: 48 PRLLIVTDPLTDHQPVTEASYVNIPVIAFTNTDSPLKFVDIAIPCNTKSTHSIGLMWWFL 107 Query: 219 A 219 A Sbjct: 108 A 108 >gi|154151754|ref|YP_001405372.1| 30S ribosomal protein S2 [Candidatus Methanoregula boonei 6A8] gi|209573660|sp|A7IAG8|RS2_METB6 RecName: Full=30S ribosomal protein S2P gi|154000306|gb|ABS56729.1| ribosomal protein S2 [Methanoregula boonei 6A8] Length = 203 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + I EA + IP+VA+ DTN+ VD VIP N+ +++++ L+ Sbjct: 121 PKVIVVTDPIGDAQVINEAVQCGIPVVALCDTNNMTKFVDLVIPTNNKGRKALSMIYFLL 180 Query: 219 ASAA--IDGIA 227 I GIA Sbjct: 181 TREMLRIRGIA 191 >gi|302565861|gb|ADL40393.1| putative 40S ribosomal protein SA [Phlebotomus perniciosus] Length = 191 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + I EA + IP++A +T+S VD IP N S SI L ++ Sbjct: 34 PRLLVVTDPSTDHQPIIEASYVNIPVIAFCNTDSPLRFVDIAIPCNTKSIYSIGLMWWML 93 Query: 219 ASAAI---DGIARQHSY 232 A + D I R+ + Sbjct: 94 AREVLRLRDKITREKKW 110 >gi|167515608|ref|XP_001742145.1| hypothetical protein [Monosiga brevicollis MX1] gi|229891593|sp|A9UPA2|RSSA_MONBE RecName: Full=40S ribosomal protein SA gi|163778769|gb|EDQ92383.1| predicted protein [Monosiga brevicollis MX1] Length = 278 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 44/213 (20%), Positives = 86/213 (40%), Gaps = 48/213 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66 I++LL + V G N M +Y++ R++ ++IDL++T + A ++I+ Sbjct: 15 IQKLLMAKVHLGASNC--TTAMSKYVYKRRSDGVNVIDLNKTYEKIVLAARIIA------ 66 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 A S A+ C + + Q R + + N Sbjct: 67 ------AVDSPANVCAISG---------------------RNFGQ-----RAILKFCNHI 94 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 F R +++++A P L+ + D + A++EA + IPI++ Sbjct: 95 GGAFPIAGRFTPGAFTNQIQKAFQE-------PRLLVLTDPLVDHQAVREASYVNIPIIS 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + D ++ VD VIP N+ S +I + ++A Sbjct: 148 LCDVDAPLRYVDVVIPCNNKSPHAIGIVWWMLA 180 >gi|256086184|ref|XP_002579284.1| ribosomal protein S2 eukaryotic and archaeal form [Schistosoma mansoni] gi|238664707|emb|CAZ35523.1| ribosomal protein S2, eukaryotic and archaeal form, putative [Schistosoma mansoni] Length = 279 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P++A +T+ VD VIP N+ S SIA+ L+ Sbjct: 119 PRLLVVSDPLSDHQAVYEANSVNVPLIAFCNTDVPLSRVDIVIPCNNKSRHSIAVVWWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|328768235|gb|EGF78282.1| hypothetical protein BATDEDRAFT_90776 [Batrachochytrium dendrobatidis JAM81] Length = 278 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + I EA + IP+++ DT+S+ VD IP N+ +I L L+ Sbjct: 119 PRLVVVTDPAMDHQPIIEASYVNIPVISFCDTDSSLKFVDVAIPTNNKGRHAIGLGWYLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|148643497|ref|YP_001274010.1| 30S ribosomal protein S2 [Methanobrevibacter smithii ATCC 35061] gi|222445005|ref|ZP_03607520.1| hypothetical protein METSMIALI_00621 [Methanobrevibacter smithii DSM 2375] gi|261350425|ref|ZP_05975842.1| ribosomal protein S2 [Methanobrevibacter smithii DSM 2374] gi|209573669|sp|A5UN64|RS2_METS3 RecName: Full=30S ribosomal protein S2P gi|148552514|gb|ABQ87642.1| ribosomal protein S2p [Methanobrevibacter smithii ATCC 35061] gi|222434570|gb|EEE41735.1| hypothetical protein METSMIALI_00621 [Methanobrevibacter smithii DSM 2375] gi|288861208|gb|EFC93506.1| ribosomal protein S2 [Methanobrevibacter smithii DSM 2374] Length = 198 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 54/211 (25%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARGGR-- 68 L +G+ G + ME+YIF R++ +++D+ +T + ++ I+ +AR Sbjct: 12 LAAGLHIGTQQ--KTSDMEKYIFRVRSDGLYVLDIQKT----DERIRQIAKLLARYDPED 65 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 IL VAT+ V + + + + +++ G +TN T ++ I+ Sbjct: 66 ILVVATRQYGQAPVKKFGEVTGAKTIPGRFIPGTLTN-PTYAKFIE-------------- 110 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 P ++ V D + A+ E+++ IP++A+ Sbjct: 111 ------------------------------PKIIVVTDPRSDAQAVLESKQNGIPVIALC 140 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 DT + VD IP N+ ++IAL L+A Sbjct: 141 DTENLLSFVDIAIPVNNKGRKAIALVYWLLA 171 >gi|324518528|gb|ADY47131.1| 40S ribosomal protein SA [Ascaris suum] Length = 299 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S VD IP N+ +SI L ++ Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|324518737|gb|ADY47191.1| 40S ribosomal protein SA [Ascaris suum] Length = 299 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S VD IP N+ +SI L ++ Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|223646786|gb|ACN10151.1| 40S ribosomal protein SA [Salmo salar] gi|223672641|gb|ACN12502.1| 40S ribosomal protein SA [Salmo salar] Length = 317 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 + + I+R+H + Sbjct: 179 SREVLRMRGTISREHPW 195 >gi|324522554|gb|ADY48079.1| 40S ribosomal protein SA [Ascaris suum] Length = 190 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S VD IP N+ +SI L ++ Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|324518296|gb|ADY47063.1| 40S ribosomal protein SA [Ascaris suum] Length = 299 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S VD IP N+ +SI L ++ Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|318087148|gb|ADV40166.1| putative ribosomal protein SA [Latrodectus hesperus] Length = 304 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 45/220 (20%), Positives = 84/220 (38%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 +AL + + L S G+ N + +ME+Y+F R++ ++I+L +T L A + I Sbjct: 8 LALKDEDVTKFLASSTHIGNENL--DFQMEQYVFKRRSDGIYLINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ A + + ++ G TN Q R+ Sbjct: 66 V-AIENPADICVISSRPFGQRAVLKFASATGATPIAGRFTPGTFTN-----QIQAAFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + + EA Sbjct: 119 ---------------------------------------PRLLVVTDPRIDHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + IP++A +T+S VD IP N+ + SI L ++A Sbjct: 140 VNIPVIAFCNTDSPLRYVDIAIPCNNKGAHSIGLMWWMLA 179 >gi|213515322|ref|NP_001134397.1| 40S ribosomal protein SA [Salmo salar] gi|269969661|sp|B5DGB6|RSSA_SALSA RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|197632133|gb|ACH70790.1| ribosomal protein SA [Salmo salar] gi|209732994|gb|ACI67366.1| 40S ribosomal protein SA [Salmo salar] gi|209736164|gb|ACI68951.1| 40S ribosomal protein SA [Salmo salar] gi|209738578|gb|ACI70158.1| 40S ribosomal protein SA [Salmo salar] Length = 317 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 + + I+R+H + Sbjct: 179 SREVLRMRGTISREHPW 195 >gi|291244299|ref|XP_002742035.1| PREDICTED: ribosomal protein SA-like [Saccoglossus kowalevskii] Length = 323 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P ++ V D + I EA + IP++A +T+S VD VIP N+ + SI L Sbjct: 119 PRILVVTDPRTDHQPITEASYVNIPVIAFCNTDSPLRYVDIVIPCNNKGANSIGL 173 >gi|225708482|gb|ACO10087.1| 40S ribosomal protein SA [Osmerus mordax] Length = 310 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 + + I+R+H + Sbjct: 179 SREVLRMRGTISREHPW 195 >gi|219852950|ref|YP_002467382.1| 30S ribosomal protein S2 [Methanosphaerula palustris E1-9c] gi|219547209|gb|ACL17659.1| ribosomal protein S2 [Methanosphaerula palustris E1-9c] Length = 202 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++F+ D + ++EA + IP+V + DTN+ +D VIP N+ +++++ L+ Sbjct: 120 PEVVFITDPIGDAQVVKEAVQSGIPVVGLCDTNNMTQFMDLVIPTNNKGRKALSMIYFLL 179 Query: 219 A 219 Sbjct: 180 T 180 >gi|209735958|gb|ACI68848.1| 40S ribosomal protein SA [Salmo salar] gi|303660487|gb|ADM15997.1| 40S ribosomal protein SA [Salmo salar] Length = 317 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVTDPRADHQPLTEASYVNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWML 178 Query: 219 ASAAI---DGIARQHSY 232 + + I+R+H + Sbjct: 179 SREVLRMRGTISREHPW 195 >gi|315425717|dbj|BAJ47373.1| small subunit ribosomal protein S2 [Candidatus Caldiarchaeum subterraneum] Length = 208 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 50/205 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + QL++ V G R + ME YIF R + ++ ++ + + L A ++IS Sbjct: 12 LEQLVKYNVHVGSR--IKVKHMEPYIFRMRYDGVYLFEVKKILTRLNLAAKLIS--YYDP 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +L V+T V + A+ + + K + GM+TN + L++ E Sbjct: 68 SEVLAVSTHVFGMKAVQKFAELTGGMAMAGKMMAGMLTN--------RTLKNYTE----- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ + D + A++EA RIP++A Sbjct: 115 --------------------------------PSIVIISDPRYDAQALEEAAIARIPVIA 142 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSI 211 + T++ VD VIP N+ S S+ Sbjct: 143 MCSTDNTCSNVDLVIPMNNRSRTSL 167 >gi|15678073|ref|NP_275187.1| 30S ribosomal protein S2 [Methanothermobacter thermautotrophicus str. Delta H] gi|3122812|sp|O26150|RS2_METTH RecName: Full=30S ribosomal protein S2P gi|2621079|gb|AAB84551.1| ribosomal protein Sa (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 198 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ D + AI EA+++ IP+VA+ DT + VD IP N+ ++IAL L+ Sbjct: 111 PEVLVATDPRSDSQAIIEAKQIGIPVVALCDTENLLGNVDIAIPVNNKGRKAIALVYWLL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|170589890|ref|XP_001899706.1| laminin receptor 1 [Brugia malayi] gi|158592832|gb|EDP31428.1| laminin receptor 1, putative [Brugia malayi] Length = 322 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S +D IP N+ +SI L L+ Sbjct: 140 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFIDIAIPCNNKGVQSIGLMWWLL 199 Query: 219 A 219 A Sbjct: 200 A 200 >gi|308158965|gb|EFO61522.1| Ribosomal protein SA [Giardia lamblia P15] Length = 245 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/213 (19%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++L + G RN + +M+ YIF +++ T + +L + + A +++ TV Sbjct: 20 VKKMLVATTHLGVRNI--DRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILV-TVDDP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I VA + A +++ K + +++ G TN + Sbjct: 77 AEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTN-------------------RM 117 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 N + + P L+ V D ++ AI EA + IP ++ Sbjct: 118 NPNYCE--------------------------PRLLLVNDPVVDRQAILEASYVNIPTIS 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++++N +D IP N+ + SI L L+A Sbjct: 152 LCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLA 184 >gi|291498618|gb|ADE08092.1| rps2 [Triticum aestivum] Length = 360 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 52/221 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + + + YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRR--VADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQY-----------CV-NSKW-LGGMMTNWK 107 + GR F+ T + E + A Y C +S+W +G +TN Sbjct: 59 SPSRQKGRSFFLKTNHL---FIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTN-- 113 Query: 108 TVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 S + K N G ++ PD + +++ Sbjct: 114 ----SFANKKKFRSRKKKINFGLNQQ-------------------------PDCVVILNA 144 Query: 168 NREKLAIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 +R+ I EA R +IPI ++VD+ + + Y IP ND Sbjct: 145 DRKSSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPAND 185 >gi|81176532|ref|YP_398416.1| rps2 [Triticum aestivum] gi|78675256|dbj|BAE47681.1| rps2 [Triticum aestivum] gi|169649065|gb|ACA62626.1| rps2 [Triticum aestivum] Length = 360 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 52/221 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + + + YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRR--VADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQY-----------CV-NSKW-LGGMMTNWK 107 + GR F+ T + E + A Y C +S+W +G +TN Sbjct: 59 SPSRQKGRSFFLKTNHL---FIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTN-- 113 Query: 108 TVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 S + K N G ++ PD + +++ Sbjct: 114 ----SFANKKKFRSRKKKINFGLNQQ-------------------------PDCVVILNA 144 Query: 168 NREKLAIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 +R+ I EA R +IPI ++VD+ + + Y IP ND Sbjct: 145 DRKSSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPAND 185 >gi|324519596|gb|ADY47425.1| 40S ribosomal protein SA [Ascaris suum] Length = 312 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S VD IP N+ +SI L ++ Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|312070710|ref|XP_003138272.1| laminin receptor 1 [Loa loa] gi|307766570|gb|EFO25804.1| laminin receptor 1 [Loa loa] Length = 294 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S +D IP N+ +SI L L+ Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFIDIAIPCNNKGVQSIGLMWWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|229891763|sp|A8Q2H5|RSSA_BRUMA RecName: Full=40S ribosomal protein SA Length = 301 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + A+ EA + +P+++ +T+S +D IP N+ +SI L L+ Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFIDIAIPCNNKGVQSIGLMWWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|324530679|gb|ADY49104.1| 40S ribosomal protein SA [Ascaris suum] Length = 178 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P L+ V D + A+ EA + +P+++ +T+S VD IP N+ +SI L Sbjct: 119 PRLLIVSDPRVDHQAVTEASYVGVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGL 173 >gi|330040320|ref|XP_003239854.1| 40S ribosomal protein SSA [Cryptomonas paramecium] gi|327206779|gb|AEA38956.1| 40S ribosomal protein SSA [Cryptomonas paramecium] Length = 208 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 31/55 (56%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P L+ V D + AI EA ++ +P++A +T++ VD VIP N+ + S A Sbjct: 114 PRLVIVADCSSGSQAISEASKVGLPVIAFCNTDTLLKFVDIVIPLNNKNKYSTAF 168 >gi|2547036|emb|CAA74226.1| ribosomal protein S2 [Triticum aestivum] Length = 362 Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 52/221 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + + + YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRR--VADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQY-----------CV-NSKW-LGGMMTNWK 107 + GR F+ T + E + A Y C +S+W +G +TN Sbjct: 59 SPSRQKGRSFFLKTNHL---FIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTN-- 113 Query: 108 TVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 S + K N G ++ PD + +++ Sbjct: 114 ----SFANKKKFRSRKKKINFGLNQQ-------------------------PDCVVILNA 144 Query: 168 NREKLAIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 +R+ I EA R +IPI ++VD+ + + Y IP ND Sbjct: 145 DRKSSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPAND 185 >gi|169837182|ref|ZP_02870370.1| 30S ribosomal protein S2 [candidate division TM7 single-cell isolate TM7a] Length = 30 Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 15/26 (57%), Positives = 19/26 (73%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERY 32 T++QLLE G FGH+ WNPKM+ Y Sbjct: 5 TMKQLLEVGAHFGHQAKRWNPKMKPY 30 >gi|290561877|gb|ADD38336.1| 40S ribosomal protein SA [Lepeophtheirus salmonis] Length = 266 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ + D + I EA R+ IP++A ++++ VD IP N+ S +I L+ Sbjct: 119 PRLLIISDPIADHQPIMEAARINIPVIAFCNSDTPLSYVDIAIPCNNKSPEAIGFIWWLL 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|84489660|ref|YP_447892.1| 30S ribosomal protein S2 [Methanosphaera stadtmanae DSM 3091] gi|121731100|sp|Q2NG04|RS2_METST RecName: Full=30S ribosomal protein S2P gi|84372979|gb|ABC57249.1| ribosomal protein S2P [Methanosphaera stadtmanae DSM 3091] Length = 198 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + A+ EA++ IP+VA+ DT + VD VIP N+ ++IAL L+ Sbjct: 111 PKILVVTDPRSDSQAVIEAKQNGIPVVALCDTENLLCNVDVVIPVNNKGRKAIALVYWLL 170 Query: 219 ASAAIDGIARQHSYMGAD 236 A I R+ + +D Sbjct: 171 ARQ----ILRERGILSSD 184 >gi|159114778|ref|XP_001707613.1| Ribosomal protein SA [Giardia lamblia ATCC 50803] gi|229891585|sp|A8BE86|RSSA_GIAIC RecName: Full=40S ribosomal protein SA gi|157435719|gb|EDO79939.1| Ribosomal protein SA [Giardia lamblia ATCC 50803] Length = 245 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 41/213 (19%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++L + G RN + +M+ YIF +++ T + +L + + A +++ T+ Sbjct: 20 VKKMLVATTHLGVRNI--DRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILV-TIDDP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I VA + A +++ K + +++ G TN + Sbjct: 77 AEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTN-------------------RM 117 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 N + + P L+ V D ++ AI EA + IP ++ Sbjct: 118 NPNYCE--------------------------PRLLLVNDPVVDRQAILEASYVNIPTIS 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++++N +D IP N+ + SI L L+A Sbjct: 152 LCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLA 184 >gi|6010099|emb|CAB57256.1| hypothetical protein [Entodinium caudatum] Length = 163 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 38/66 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI E+ + +P++A+ ++++ VD IP N+ ++ SIA+ L+ Sbjct: 23 PRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVDCAIPCNNRNNYSIAMIWYLL 82 Query: 219 ASAAID 224 A ++ Sbjct: 83 TKAVLE 88 >gi|260801725|ref|XP_002595746.1| hypothetical protein BRAFLDRAFT_200833 [Branchiostoma floridae] gi|229280993|gb|EEN51758.1| hypothetical protein BRAFLDRAFT_200833 [Branchiostoma floridae] Length = 299 Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V+D + + EA + IP++A +T+S VD IP N+ S+ L ++ Sbjct: 119 PRLLIVLDPRMDHQPVTEASYVNIPVIAFCNTDSPLRYVDIAIPCNNKGVHSVGLMVWML 178 Query: 219 A 219 A Sbjct: 179 A 179 >gi|325302798|tpg|DAA34051.1| TPA_exp: 40S ribosomal protein SA [Amblyomma variegatum] Length = 232 Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 29/55 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 P L+ V D + + EA + +P++A +T++ VD IP N+ S SI L Sbjct: 119 PRLLVVCDPRADHQPVTEASYVNLPVIAFCNTDATLRYVDIAIPCNNKSQHSIGL 173 >gi|253742932|gb|EES99556.1| Ribosomal protein SA [Giardia intestinalis ATCC 50581] Length = 244 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 41/213 (19%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++L + G RN + +M+ YIF +++ T + +L + + A +++ T+ Sbjct: 20 VKRMLVATTHLGVRNI--DRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILV-TIDDP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I VA + A +++ K + +++ G TN + Sbjct: 77 AEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTN-------------------RM 117 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 N + + P L+ V D ++ AI EA + IP ++ Sbjct: 118 NPNYCE--------------------------PRLLLVNDPVVDRQAILEASYVNIPTIS 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++++N +D IP N+ + SI L L+A Sbjct: 152 LCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLA 184 >gi|300521568|gb|ADK25995.1| r-protein S2p [Candidatus Nitrososphaera gargensis] Length = 243 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 37/61 (60%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P+++ V D ++ A+ EA R +P++A+ ++++ VD VIP N+ +++A L+ Sbjct: 149 PEIVVVTDPQADQQAVLEATRAGVPVIAIANSDNVTSKVDLVIPANNRGRKALATVYWLL 208 Query: 219 A 219 A Sbjct: 209 A 209 >gi|54261161|dbj|BAD61010.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare] Length = 562 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 46/218 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + + + YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRR--VADHHFKVYIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKS--------QASDCVMEAAKRSAQYCV-NSKW-LGGMMTNWKTVS 110 + + GR F+ T + + + + +C +S+W +G +TN Sbjct: 59 SPIRQKGRSFFLKTNHLFIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTN----- 113 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 S + K N G ++ PD + +++ +R+ Sbjct: 114 -SFANKKKFRSRKKKINFGLNQQ-------------------------PDCVVILNADRK 147 Query: 171 KLAIQEARRLRIPIVAVVDTN---SNPDLVDYVIPGND 205 I EA R +IPI ++VD+ + + Y IP ND Sbjct: 148 SSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPAND 185 >gi|88604125|ref|YP_504303.1| 30S ribosomal protein S2 [Methanospirillum hungatei JF-1] gi|121729244|sp|Q2FTN4|RS2_METHJ RecName: Full=30S ribosomal protein S2P gi|88189587|gb|ABD42584.1| SSU ribosomal protein S2P [Methanospirillum hungatei JF-1] Length = 202 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 31/46 (67%) Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 I+EA ++ IP+VA+ DTN+ LVD V+P N+ +++++ L+ Sbjct: 135 IREAIQVSIPVVALCDTNNMTSLVDVVVPTNNKGRKALSMIYFLLT 180 >gi|307006539|gb|ADN23554.1| 40S ribosomal protein SA (P40)/laminin receptor 1 [Hyalomma marginatum rufipes] Length = 239 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P L+ V D + + EA + +P++A +T++ VD IP N+ S SI L Sbjct: 46 PRLLVVCDPRADHQPVTEASYVNLPVIAFCNTDATLRYVDIAIPCNNKSQHSIGLL 101 >gi|325104582|ref|YP_004274236.1| glucokinase regulatory-like protein [Pedobacter saltans DSM 12145] gi|324973430|gb|ADY52414.1| glucokinase regulatory-like protein [Pedobacter saltans DSM 12145] Length = 269 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Query: 45 LSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 +++ +P ++K + V + + +GGRI ++ + V++A++ + V W+ G++ Sbjct: 37 VAKAIPQIEKLVAVAVECMKKGGRIFYIGAGTSGRLGVLDASECPPTFGVPFDWIVGIIA 96 Query: 105 NWKT-VSQSIQKLRDLEELLNKENQGFTKKE 134 T + ++++ D E K+ QGF E Sbjct: 97 GGDTAIRKAVENAEDDMEQAWKDLQGFGINE 127 >gi|187764108|ref|YP_001876557.1| ribosomal protein S2 [Dictyostelium fasciculatum] gi|160688816|gb|ABX45231.1| ribosomal protein S2 [Dictyostelium fasciculatum] Length = 333 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 34/218 (15%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP + +++ R II+L T+ ++ L +I + V G+I+ + K + ++ V Sbjct: 36 WNPLLVGFLYKIRKGMLIINLEYTIFQIKNGLNLIKNIVRNRGKIMILVLKKKINNIVKI 95 Query: 85 AAKRSAQYCVNSKWLGG---------MMTNWKTVSQSIQKLRDLEELLNKENQGFTKKER 135 ++ Q V K+ G + K + I KLR + L Sbjct: 96 LLTKNKQGYVVYKYSHGSLMRFRRMRRLFELKRMGYLIGKLRPITFL------------- 142 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 L G + P L+ + N+++ +E+ I +++ +DTN+ Sbjct: 143 ------------KLKGYVALRRPPALLVLTTGNKQEDIYRESLYAGIRVLSFIDTNTMTL 190 Query: 196 LVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + + GN ++++I L L+ A GI + + Sbjct: 191 WQSHTVVGNSKTNKNINLILLLINYAIFFGIKNESKFF 228 >gi|307006537|gb|ADN23553.1| 40S ribosomal protein SA [Hyalomma marginatum rufipes] Length = 208 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 P L+ V D + + EA + +P++A +T++ VD IP N+ S SI L Sbjct: 15 PRLLVVCDPRADHQPVTEASYVNLPVIAFCNTDATLRYVDIAIPCNNKSQHSIGLL 70 >gi|304314294|ref|YP_003849441.1| 30S ribosomal protein S2P [Methanothermobacter marburgensis str. Marburg] gi|302587753|gb|ADL58128.1| 30S ribosomal protein S2P [Methanothermobacter marburgensis str. Marburg] Length = 198 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ D + AI EA+++ +P+VA+ DT + VD IP N+ ++IAL L+ Sbjct: 111 PQVLVATDPRSDSQAIVEAKQIGLPVVALCDTENLLGNVDIAIPVNNKGRKAIALVYWLL 170 Query: 219 A 219 A Sbjct: 171 A 171 >gi|308478701|ref|XP_003101561.1| hypothetical protein CRE_10378 [Caenorhabditis remanei] gi|308263015|gb|EFP06968.1| hypothetical protein CRE_10378 [Caenorhabditis remanei] Length = 424 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 11/88 (12%) Query: 114 QKLRDLEELLNKENQ------GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 QK RDL++LLN EN +T+K E +L+ L+ +R + + ++ + DT Sbjct: 88 QKTRDLQKLLNDENGWLREELAYTQKRLQESESAVARLEEELNQLRFLDSMKNV--ICDT 145 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPD 195 N LA + + RIPI+ V+D +P+ Sbjct: 146 NTASLADESS---RIPIIDVLDLGFDPE 170 >gi|8574701|gb|AAF77666.1|AF193933_1 mitochondrial protein [Clematis sp. Qiu 95085] Length = 113 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 33/139 (23%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N S+W +GG +TN K Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIG--CINDSQWRIGGFLTNKKIKKSK 58 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 + ++ +++N + PD + ++D +R+ Sbjct: 59 QKIR--------------SRNKKINFGSNQQ---------------PDCVVIMDADRKSS 89 Query: 173 AIQEARRLRIPIVAVVDTN 191 I EA R +IPI + VD+N Sbjct: 90 VILEADRSQIPIASSVDSN 108 >gi|269859696|ref|XP_002649572.1| SSU ribosomal protein S2P [Enterocytozoon bieneusi H348] gi|269969649|sp|B7XHU4|RSSA_ENTBH RecName: Full=40S ribosomal protein S0 gi|220066935|gb|EED44404.1| SSU ribosomal protein S2P [Enterocytozoon bieneusi H348] Length = 240 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIA 212 P L+ V D +K AI+EA ++ P +A +T+ + VD IP N+ S ++I Sbjct: 117 PRLIIVSDPIVDKQAIEEAAKVNCPTIAFCNTDCDLKYVDIAIPLNNRSPKAIG 170 >gi|288560173|ref|YP_003423659.1| ribosomal protein S2P Rps2p [Methanobrevibacter ruminantium M1] gi|288542883|gb|ADC46767.1| ribosomal protein S2P Rps2p [Methanobrevibacter ruminantium M1] Length = 198 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P ++ V D + AI E+++ IP+V + DT + VD +P N+ ++IAL L+ Sbjct: 111 PKVIVVTDPRSDSQAILESKQNGIPVVGLCDTENLLANVDICVPSNNKGRKAIALIYWLL 170 Query: 219 ASAAIDGIARQHSYMGAD 236 A I R+ +G D Sbjct: 171 ARQ----ILRERGILGED 184 >gi|255521680|ref|ZP_05388917.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J1-175] Length = 60 Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 23/34 (67%) Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 N +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 1 NCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 34 >gi|269122421|ref|YP_003310598.1| glucokinase regulatory-like protein [Sebaldella termitidis ATCC 33386] gi|268616299|gb|ACZ10667.1| glucokinase regulatory-like protein [Sebaldella termitidis ATCC 33386] Length = 294 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 45/233 (19%), Positives = 103/233 (44%), Gaps = 35/233 (15%) Query: 45 LSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 + +T+P ++KA+++I + GGRI+++ + V++A + S + + G + Sbjct: 40 IKETLPDVEKAVKIIIKNLKNGGRIIYMGAGTSGRLGVLDAVECSPTFGTIDEVQGIIAG 99 Query: 105 NWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFV 164 ++++ D +EL KE + +LNI K D + GI G P +V Sbjct: 100 GEGAFVKAVEGAEDSKELAEKELK------KLNI-GKNDTIV----GIAASGRTP---YV 145 Query: 165 VDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDY------------VIPGND--DSSRS 210 + ++ ARR V+ + N N ++ Y V+ G+ + + Sbjct: 146 IG------GLEYARRAGADTVS-ISCNKNAEISKYADAAIEVDCGPEVLTGSTRLKAGSA 198 Query: 211 IALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESS 263 + +++++A++ G+ + + + D ++ E +V + + +E S E + Sbjct: 199 QKMILNMISTASMVGVGKVYGNLMVDVRATNEKLVERAKRIVMEATGASYEEA 251 >gi|150016789|ref|YP_001309043.1| N-acetylmuramic acid-6-phosphate etherase [Clostridium beijerinckii NCIMB 8052] gi|189030378|sp|A6LUQ7|MURQ_CLOB8 RecName: Full=N-acetylmuramic acid 6-phosphate etherase; Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic acid 6-phosphate hydrolase; AltName: Full=N-acetylmuramic acid 6-phosphate lyase gi|149903254|gb|ABR34087.1| glucokinase regulatory-like protein [Clostridium beijerinckii NCIMB 8052] Length = 304 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/79 (22%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Query: 45 LSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 + + +P + KA+ +I++ + RGGR++++ + V++A++ Y V+ + + G++ Sbjct: 44 VEKELPKIAKAIDMIAERIHRGGRLIYIGAGTSGRLGVLDASECPPTYGVSEELVQGIIA 103 Query: 105 NWK-TVSQSIQKLRDLEEL 122 K + ++ + D EEL Sbjct: 104 GGKEAIFRAKEGAEDSEEL 122 >gi|147810890|emb|CAN69492.1| hypothetical protein VITISV_042288 [Vitis vinifera] Length = 623 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 3/93 (3%) Query: 43 IDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGM 102 ++ S+ V M QKA ++ D +RG + L V TK +A A K Y V K LGG Sbjct: 9 LNGSRCVKMGQKACDLVFDAASRGKQFLIVGTKDKADSVARTAIKARCHY-VYKKCLGGP 67 Query: 103 MTNWKTVSQSI--QKLRDLEELLNKENQGFTKK 133 + + Q I Q L L G ++ Sbjct: 68 LVHGSNQYQIIIFQSLHTFPTPLPNRPYGVRRR 100 >gi|328873762|gb|EGG22128.1| 40S ribosomal protein SA [Dictyostelium fasciculatum] Length = 212 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + + EA + IP +A+ T + D +D IP N+ SIAL L+ Sbjct: 86 PRLLIVCDPDVDHQPLVEASYVNIPTIALCTTENKLDGIDIAIPCNNRGKNSIALMFWLL 145 Query: 219 A 219 A Sbjct: 146 A 146 >gi|154173847|ref|YP_001408597.1| phosphoheptose isomerase [Campylobacter curvus 525.92] gi|112803967|gb|EAU01311.1| phosphoheptose isomerase [Campylobacter curvus 525.92] Length = 188 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 39 NTHIIDLSQTVPM---LQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN 95 N H+ L++TV M LQKA +++ + GG+IL A+D AA+ + +Y Sbjct: 12 NAHLQTLNETVKMSEQLQKACEMVVRALKNGGKILICGNGGSAADAQHFAAELTGRYKSE 71 Query: 96 SKWLGGM 102 K L G+ Sbjct: 72 RKPLAGI 78 >gi|8574659|gb|AAF77645.1|AF193912_1 mitochondrial protein [Ceratophyllum demersum] Length = 110 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/33 (48%), Positives = 24/33 (72%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 PD + ++DT+R+ I EA RL+IPI + VD+N Sbjct: 73 PDCVVLLDTDRKSSVILEADRLQIPIASSVDSN 105 >gi|163791615|ref|ZP_02186014.1| N-acetylmuramic acid-6-phosphate etherase [Carnobacterium sp. AT7] gi|159873104|gb|EDP67209.1| N-acetylmuramic acid-6-phosphate etherase [Carnobacterium sp. AT7] Length = 296 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/79 (20%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Query: 45 LSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 + + +PM+ K ++ I+D+ ++GGR++++ + V++AA+ + V+ + G++ Sbjct: 41 VEEALPMITKVVETITDSFSKGGRLIYMGAGTSGRLGVLDAAECVPTFSVDPSMVQGLIA 100 Query: 105 -NWKTVSQSIQKLRDLEEL 122 K ++ +++ D + L Sbjct: 101 GGMKAMTVAVEGAEDSKTL 119 >gi|8574687|gb|AAF77659.1|AF193926_1 mitochondrial protein [Austrobaileya scandens] Length = 109 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 36/138 (26%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNS-KW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N KW +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRFFFVNTNSLFDEIMEQMATRIG--CINDDKWRIGGFLTNCSSPKKI 58 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 + + + N++ PD + ++D +R+ Sbjct: 59 RSRKKKINFGSNQQ--------------------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDT 190 I EA R +IPIV+ VD+ Sbjct: 87 VILEADRSQIPIVSSVDS 104 >gi|229029438|ref|ZP_04185521.1| hypothetical protein bcere0028_15290 [Bacillus cereus AH1271] gi|228731897|gb|EEL82796.1| hypothetical protein bcere0028_15290 [Bacillus cereus AH1271] Length = 300 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 44/217 (20%) Query: 30 ERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS 89 E Y FC+R+ +II+ IS V++ LF T+SQ + + K Sbjct: 69 EVYQFCQRHGLNIIN--------------ISKYVSKNELNLFPKTESQLQNTYYKLKKHE 114 Query: 90 AQYCVNSKWLGGMMTNWKTVSQSIQKLRD------LEELLNKENQ------------GFT 131 + K G + V ++I +++ +EE+ +KEN+ F Sbjct: 115 IPFENIEKQKPGRKRKYTPVKETIVEMKKENNHVLIEEVQHKENEKSLVTVISGIVDNFE 174 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL-----AIQ-EARRLRIPIV 185 + + ERK D+L + ++GI + + F ++NR L A+Q E RL+ Sbjct: 175 TISQ-HSERKEDELHQFMEGIYKLSSMAAGHFKEESNRSSLERELRALQLENERLKREKE 233 Query: 186 AVV-DTNSNPDLVDYVIPGND-DSSRSIALF---CDL 217 +V D + + Y I +D D R + F C L Sbjct: 234 ELVQDVKNMTQHLTYFIKSSDVDQIRKLPTFVQECKL 270 >gi|170290627|ref|YP_001737443.1| 30S ribosomal protein S2 [Candidatus Korarchaeum cryptofilum OPF8] gi|209573658|sp|B1L5N1|RS2_KORCO RecName: Full=30S ribosomal protein S2P gi|170174707|gb|ACB07760.1| ribosomal protein S2 [Candidatus Korarchaeum cryptofilum OPF8] Length = 217 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 34/55 (61%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 PD++ + D ++ E+ R+ IP+VA+VD ++ + +D IP N+ RS+AL Sbjct: 126 PDVVLLSDPRVDRQIHIESVRMGIPVVALVDADNMLENIDLAIPVNNKGRRSLAL 180 >gi|195124788|ref|XP_002006869.1| GI18357 [Drosophila mojavensis] gi|193911937|gb|EDW10804.1| GI18357 [Drosophila mojavensis] Length = 1745 Score = 35.8 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%) Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE--NQGFTKKERLNIERKRDK 144 +R+++ +N L G+ + S R L + + +G + LN E R++ Sbjct: 755 RRNSKSKMNMPCLEGIYQRLTRLQNSTSDQRILLNNIKSKLKERGLLQSAMLNQESSRNR 814 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 A+D + D +L VVDTNR KL+ Q+ + +R Sbjct: 815 TNEAVDTLADSILSMNLSHVVDTNRAKLSQQKLKSIR 851 >gi|324309733|gb|ADY18514.1| ribosomal protein S2 [Phaeodactylum tricornutum] Length = 245 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 39 NTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SK 97 NT + + T ++KAL VI RILFV T S A + + K + ++ S Sbjct: 28 NTANLKIEDTEYRIKKALHVIYKYHKHNKRILFVGTPSNAHKEIKQLLKETKHVLISESI 87 Query: 98 WLGGMMTN 105 W G +TN Sbjct: 88 WTNGCITN 95 >gi|17228671|ref|NP_485219.1| hypothetical protein all1176 [Nostoc sp. PCC 7120] gi|17130523|dbj|BAB73133.1| all1176 [Nostoc sp. PCC 7120] Length = 868 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%) Query: 100 GGMMTNWKTVSQSIQKLRDLEELLNKENQG----FTKKERLNIERK-RDKLKRALDGIRD 154 G ++++KTV S R++E+++ + Q F+ +ERLN+ RK D L R L+ Sbjct: 560 GKPLSSYKTVLSS----REIEDIIKQTRQSLNPIFSNEERLNVSRKLYDWLIRPLESELS 615 Query: 155 MGGLPDLMFVVD 166 G+ L FV+D Sbjct: 616 KSGIKTLAFVLD 627 >gi|258542495|ref|YP_003187928.1| DNA helicase [Acetobacter pasteurianus IFO 3283-01] gi|256633573|dbj|BAH99548.1| DNA helicase [Acetobacter pasteurianus IFO 3283-01] gi|256636632|dbj|BAI02601.1| DNA helicase [Acetobacter pasteurianus IFO 3283-03] gi|256639685|dbj|BAI05647.1| DNA helicase [Acetobacter pasteurianus IFO 3283-07] gi|256642741|dbj|BAI08696.1| DNA helicase [Acetobacter pasteurianus IFO 3283-22] gi|256645796|dbj|BAI11744.1| DNA helicase [Acetobacter pasteurianus IFO 3283-26] gi|256648849|dbj|BAI14790.1| DNA helicase [Acetobacter pasteurianus IFO 3283-32] gi|256654893|dbj|BAI20820.1| DNA helicase [Acetobacter pasteurianus IFO 3283-12] Length = 2008 Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 12/172 (6%) Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKR--SAQYCVNSKWLGGMMTNWKTVSQSIQK 115 +I++T+A+G +LFVA K A + V ++ A++C++ L + V Q Q Sbjct: 739 IIANTLAQGRTVLFVAEKRTALEVVRNRLEKLGIAEFCLD---LFSPKASKMGVLQQFQT 795 Query: 116 LRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 + E +E TK+ + + + AL R G P + L Q Sbjct: 796 AQAALEDFQQEEYAHTKQTLDTLRHELNAYVHALHAPRRNGWTPYRGIGI-----TLRAQ 850 Query: 176 EARRLRIPIVAV-VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 E + +RIP+V D +S D D ++ +D + A D+V S + G+ Sbjct: 851 EEKIVRIPLVWRDADAHSKTD-YDNLVQAAEDLATLYARIGDIVVSPQLAGL 901 Searching..................................................done Results from round 2 >gi|254780779|ref|YP_003065192.1| 30S ribosomal protein S2 [Candidatus Liberibacter asiaticus str. psy62] gi|254040456|gb|ACT57252.1| 30S ribosomal protein S2 [Candidatus Liberibacter asiaticus str. psy62] Length = 278 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS Sbjct: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE Sbjct: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL Sbjct: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA Sbjct: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS Sbjct: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 >gi|116251977|ref|YP_767815.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. viciae 3841] gi|241204504|ref|YP_002975600.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|123081925|sp|Q1MH54|RS2_RHIL3 RecName: Full=30S ribosomal protein S2 gi|115256625|emb|CAK07713.1| putative 30S ribosomal protein S2 [Rhizobium leguminosarum bv. viciae 3841] gi|240858394|gb|ACS56061.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 255 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 168/254 (66%), Positives = 210/254 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILNGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQGSSGRDLGAS 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 SEVPVEPALEEAAE 254 >gi|86357534|ref|YP_469426.1| 30S ribosomal protein S2 [Rhizobium etli CFN 42] gi|209549182|ref|YP_002281099.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|123738344|sp|Q2K8Y7|RS2_RHIEC RecName: Full=30S ribosomal protein S2 gi|238058199|sp|B5ZN83|RS2_RHILW RecName: Full=30S ribosomal protein S2 gi|86281636|gb|ABC90699.1| 30S ribosomal protein S2 [Rhizobium etli CFN 42] gi|209534938|gb|ACI54873.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 255 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 169/254 (66%), Positives = 211/254 (83%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILNGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSSGRDLGAS 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 SEVPVEPALEEAAE 254 >gi|190891607|ref|YP_001978149.1| 30S ribosomal protein S2 [Rhizobium etli CIAT 652] gi|238692537|sp|B3PYP2|RS2_RHIE6 RecName: Full=30S ribosomal protein S2 gi|190696886|gb|ACE90971.1| 30S ribosomal protein S2 [Rhizobium etli CIAT 652] Length = 255 Score = 362 bits (928), Expect = 5e-98, Method: Composition-based stats. Identities = 168/254 (66%), Positives = 210/254 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILGGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSSGRDLGAS 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 SEVPVEPALEEAAE 254 >gi|13470846|ref|NP_102415.1| 30S ribosomal protein S2 [Mesorhizobium loti MAFF303099] gi|25009218|sp|Q98MB2|RS2_RHILO RecName: Full=30S ribosomal protein S2 gi|14021589|dbj|BAB48201.1| 30S ribosomal protein S2 [Mesorhizobium loti MAFF303099] Length = 260 Score = 361 bits (926), Expect = 7e-98, Method: Composition-based stats. Identities = 156/260 (60%), Positives = 204/260 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G+ FGH+ WNPKM YI+ RNN HIIDLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QG TKKERLN++R+R+KL +AL GI+DMG PDLMFV+DTN+E +AI EA+RL Sbjct: 121 EMLAGEAQGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAIAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +D+ IPGNDD++R+I L+CDL+A AAIDGIARQ +G D ++ Sbjct: 181 GIPVVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGVDIGAS 240 Query: 241 GETVVHSKEGMQLEEDSQSS 260 E V ++ + Sbjct: 241 VEAPVEPALDPAPSTEAPQA 260 >gi|110633734|ref|YP_673942.1| 30S ribosomal protein S2 [Mesorhizobium sp. BNC1] gi|123057988|sp|Q11IJ8|RS2_MESSB RecName: Full=30S ribosomal protein S2 gi|110284718|gb|ABG62777.1| SSU ribosomal protein S2P [Chelativorans sp. BNC1] Length = 267 Score = 361 bits (926), Expect = 8e-98, Method: Composition-based stats. Identities = 166/261 (63%), Positives = 206/261 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM YIF ERNN HIIDLSQTVP+L +AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMTPYIFGERNNIHIIDLSQTVPLLHQALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTV RGGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVGRGGRLLFVGTKRQASDIVADAARRSAQYYVNSRWLGGMLTNWKTISNSIQRLRRLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L+ EN G TKKERLN+ER+RDKL+RAL GIRDMG PD+MFV+DTN+E +A+QEARRL Sbjct: 121 EMLSSENLGLTKKERLNLERERDKLERALGGIRDMGSTPDMMFVIDTNKEAIAVQEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AV+D+N +PD+VDY IPGNDD++R+IAL+CDL+A AAIDGI RQ +G D + Sbjct: 181 GIPVIAVIDSNCDPDVVDYPIPGNDDAARAIALYCDLIAKAAIDGIERQQGSLGVDIGES 240 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 E + E Sbjct: 241 AAAPSEPALETASAEATAEGE 261 >gi|327189222|gb|EGE56401.1| 30S ribosomal protein S2 [Rhizobium etli CNPAF512] Length = 255 Score = 360 bits (925), Expect = 9e-98, Method: Composition-based stats. Identities = 167/254 (65%), Positives = 210/254 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQ++S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQIVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILGGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSSGRDLGAS 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 SEVPVEPALEEAAE 254 >gi|222085857|ref|YP_002544388.1| ribosomal protein S2 [Agrobacterium radiobacter K84] gi|254764450|sp|B9JEX0|RS2_AGRRK RecName: Full=30S ribosomal protein S2 gi|221723305|gb|ACM26461.1| ribosomal protein S2 [Agrobacterium radiobacter K84] Length = 256 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 167/247 (67%), Positives = 210/247 (85%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVP+L +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPLLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASELIADSAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN + QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+RL Sbjct: 121 EILNGDAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+CDL+A AAIDGIARQ S G D ++ Sbjct: 181 GIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLIARAAIDGIARQQSASGRDLGAS 240 Query: 241 GETVVHS 247 E V Sbjct: 241 IEAPVEP 247 >gi|260459211|ref|ZP_05807466.1| ribosomal protein S2 [Mesorhizobium opportunistum WSM2075] gi|259034765|gb|EEW36021.1| ribosomal protein S2 [Mesorhizobium opportunistum WSM2075] Length = 260 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 156/260 (60%), Positives = 204/260 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G+ FGH+ WNPKM YI+ RNN HIIDLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QG TKKERLN++R+R+KL +AL GI+DMG PDLMFV+DTN+E +AI EA+RL Sbjct: 121 EMLAGEAQGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAIAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +D+ IPGNDD++R+I L+CDL+A AAIDGIARQ +G D ++ Sbjct: 181 GIPVVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGVDIGAS 240 Query: 241 GETVVHSKEGMQLEEDSQSS 260 E V ++ + Sbjct: 241 VEAPVEPALDPAPASETPEA 260 >gi|114704876|ref|ZP_01437784.1| 30S ribosomal protein S2 [Fulvimarina pelagi HTCC2506] gi|114539661|gb|EAU42781.1| 30S ribosomal protein S2 [Fulvimarina pelagi HTCC2506] Length = 284 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 165/280 (58%), Positives = 211/280 (75%), Gaps = 2/280 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH+ WNPKM YIF RNN HI+DL+QTVP+L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQTHRWNPKMSPYIFGARNNIHILDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA+RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAAQRSAQYYVNARWLGGMMTNWKTISHSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL+ E QGFTKKERL + R+RDKL+ AL GIRDMGG+PD+MF++DTN+E +AI EARRL Sbjct: 121 ELLSGEAQGFTKKERLTLTRERDKLETALGGIRDMGGVPDMMFIIDTNKESIAIDEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVD+N +P VDY IPGNDD+SR+IAL+CDL+A AA+DGIARQ G D Sbjct: 181 GIPVVAVVDSNCDPARVDYPIPGNDDASRAIALYCDLIARAAVDGIARQQGDSGMDIGEM 240 Query: 241 GETVVHSKEGMQLEEDSQSSE--SSVLDGQEVAVVPELMS 278 + E + E + + + ++ Q V + + Sbjct: 241 EDAPAEVIEEAKTEAEVPGDQPGEAPVEEQPVGQAAQTAA 280 >gi|222109130|ref|YP_002551395.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] gi|221738404|gb|ACM39269.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] Length = 307 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 162/270 (60%), Positives = 216/270 (80%), Gaps = 7/270 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +R+N HIIDL QTVP+L +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTGRWNPKMKPYIFGDRSNIHIIDLGQTVPLLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E G++KKERL +ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI+EA+RL Sbjct: 121 EILNSEGSGYSKKERLTLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD +D+ IPGNDD+SR+I+L+CDL+A AAIDGI RQ G D ++ Sbjct: 181 GIPVVAIIDTNCDPDSIDFPIPGNDDASRAISLYCDLIARAAIDGIGRQQRASGRDLGAS 240 Query: 241 GETVV-------HSKEGMQLEEDSQSSESS 263 E+ S + +++ ED + +++ Sbjct: 241 PESFALEDQSDGESAKVVKISEDVGAGDAN 270 >gi|159184736|ref|NP_354381.2| 30S ribosomal protein S2 [Agrobacterium tumefaciens str. C58] gi|25009204|sp|Q8UFM3|RS2_AGRT5 RecName: Full=30S ribosomal protein S2 gi|159140024|gb|AAK87166.2| 30S ribosomal protein S2 [Agrobacterium tumefaciens str. C58] Length = 255 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 162/257 (63%), Positives = 213/257 (82%), Gaps = 2/257 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR ++ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E G++KKERL +ER+R+KL++AL GIRDMGG+PDLMF++DTN+EK+AI+EA+RL Sbjct: 121 EILNSEGSGYSKKERLTLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +DY IPGNDD+SR+I+L+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDGIARQQGASGRDIGAS 240 Query: 241 GETVVHSKEGMQLEEDS 257 E + ++ E + Sbjct: 241 EEAPIEP--ALEDEAGA 255 >gi|23502040|ref|NP_698167.1| 30S ribosomal protein S2 [Brucella suis 1330] gi|62290075|ref|YP_221868.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. 9-941] gi|82700001|ref|YP_414575.1| 30S ribosomal protein S2 [Brucella melitensis biovar Abortus 2308] gi|161619113|ref|YP_001593000.1| 30S ribosomal protein S2 [Brucella canis ATCC 23365] gi|163843426|ref|YP_001627830.1| 30S ribosomal protein S2 [Brucella suis ATCC 23445] gi|189024314|ref|YP_001935082.1| 30S ribosomal protein S2 [Brucella abortus S19] gi|225852659|ref|YP_002732892.1| 30S ribosomal protein S2 [Brucella melitensis ATCC 23457] gi|254689385|ref|ZP_05152639.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870] gi|254693869|ref|ZP_05155697.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya] gi|254697520|ref|ZP_05159348.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59] gi|254701903|ref|ZP_05163731.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513] gi|254704448|ref|ZP_05166276.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686] gi|254710236|ref|ZP_05172047.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94] gi|254714232|ref|ZP_05176043.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1] gi|254717668|ref|ZP_05179479.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1] gi|254719224|ref|ZP_05181035.1| 30S ribosomal protein S2 [Brucella sp. 83/13] gi|254730415|ref|ZP_05188993.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292] gi|256031730|ref|ZP_05445344.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1] gi|256044817|ref|ZP_05447721.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1] gi|256061243|ref|ZP_05451394.1| 30S ribosomal protein S2 [Brucella neotomae 5K33] gi|256113722|ref|ZP_05454526.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether] gi|256159896|ref|ZP_05457618.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1] gi|256255130|ref|ZP_05460666.1| 30S ribosomal protein S2 [Brucella ceti B1/94] gi|256257631|ref|ZP_05463167.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68] gi|256263847|ref|ZP_05466379.1| ribosomal protein S2 [Brucella melitensis bv. 2 str. 63/9] gi|256369587|ref|YP_003107097.1| 30S ribosomal protein S2 [Brucella microti CCM 4915] gi|260168863|ref|ZP_05755674.1| 30S ribosomal protein S2 [Brucella sp. F5/99] gi|260546625|ref|ZP_05822364.1| ribosomal protein S2 [Brucella abortus NCTC 8038] gi|260565583|ref|ZP_05836067.1| ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M] gi|260566305|ref|ZP_05836775.1| ribosomal protein S2 [Brucella suis bv. 4 str. 40] gi|260754903|ref|ZP_05867251.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870] gi|260758120|ref|ZP_05870468.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292] gi|260761946|ref|ZP_05874289.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59] gi|260883915|ref|ZP_05895529.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68] gi|261214155|ref|ZP_05928436.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya] gi|261219509|ref|ZP_05933790.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1] gi|261222328|ref|ZP_05936609.1| 30S ribosomal protein S2 [Brucella ceti B1/94] gi|261317795|ref|ZP_05956992.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94] gi|261322004|ref|ZP_05961201.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1] gi|261325251|ref|ZP_05964448.1| 30S ribosomal protein S2 [Brucella neotomae 5K33] gi|261752467|ref|ZP_05996176.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513] gi|261755126|ref|ZP_05998835.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686] gi|261758351|ref|ZP_06002060.1| ribosomal protein S2 [Brucella sp. F5/99] gi|265984219|ref|ZP_06096954.1| 30S ribosomal protein S2 [Brucella sp. 83/13] gi|265988826|ref|ZP_06101383.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1] gi|265991241|ref|ZP_06103798.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1] gi|265995077|ref|ZP_06107634.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether] gi|265998292|ref|ZP_06110849.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1] gi|297248473|ref|ZP_06932191.1| 30S ribosomal protein S2 [Brucella abortus bv. 5 str. B3196] gi|306837973|ref|ZP_07470831.1| ribosomal protein S2 [Brucella sp. NF 2653] gi|306844026|ref|ZP_07476621.1| ribosomal protein S2 [Brucella sp. BO1] gi|38258384|sp|Q8G0D6|RS2_BRUSU RecName: Full=30S ribosomal protein S2 gi|75505270|sp|Q57CX7|RS2_BRUAB RecName: Full=30S ribosomal protein S2 gi|123768485|sp|Q2YRJ1|RS2_BRUA2 RecName: Full=30S ribosomal protein S2 gi|189044927|sp|A9M5H4|RS2_BRUC2 RecName: Full=30S ribosomal protein S2 gi|189044928|sp|B0CGV9|RS2_BRUSI RecName: Full=30S ribosomal protein S2 gi|238689378|sp|B2S611|RS2_BRUA1 RecName: Full=30S ribosomal protein S2 gi|254764461|sp|C0RJD0|RS2_BRUMB RecName: Full=30S ribosomal protein S2 gi|23347995|gb|AAN30082.1| ribosomal protein S2 [Brucella suis 1330] gi|62196207|gb|AAX74507.1| RpsB, ribosomal protein S2 [Brucella abortus bv. 1 str. 9-941] gi|82616102|emb|CAJ11140.1| Ribosomal protein S2:Ribosomal protein S2, bacterial and organelle form [Brucella melitensis biovar Abortus 2308] gi|161335924|gb|ABX62229.1| ribosomal protein S2 [Brucella canis ATCC 23365] gi|163674149|gb|ABY38260.1| ribosomal protein S2 [Brucella suis ATCC 23445] gi|189019886|gb|ACD72608.1| Ribosomal protein S2 [Brucella abortus S19] gi|225641024|gb|ACO00938.1| ribosomal protein S2 [Brucella melitensis ATCC 23457] gi|255999749|gb|ACU48148.1| 30S ribosomal protein S2 [Brucella microti CCM 4915] gi|260095675|gb|EEW79552.1| ribosomal protein S2 [Brucella abortus NCTC 8038] gi|260151651|gb|EEW86745.1| ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M] gi|260155823|gb|EEW90903.1| ribosomal protein S2 [Brucella suis bv. 4 str. 40] gi|260668438|gb|EEX55378.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292] gi|260672378|gb|EEX59199.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59] gi|260675011|gb|EEX61832.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870] gi|260873443|gb|EEX80512.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68] gi|260915762|gb|EEX82623.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya] gi|260920912|gb|EEX87565.1| 30S ribosomal protein S2 [Brucella ceti B1/94] gi|260924598|gb|EEX91166.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1] gi|261294694|gb|EEX98190.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1] gi|261297018|gb|EEY00515.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94] gi|261301231|gb|EEY04728.1| 30S ribosomal protein S2 [Brucella neotomae 5K33] gi|261738335|gb|EEY26331.1| ribosomal protein S2 [Brucella sp. F5/99] gi|261742220|gb|EEY30146.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513] gi|261744879|gb|EEY32805.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686] gi|262552760|gb|EEZ08750.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1] gi|262766190|gb|EEZ11979.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether] gi|263002025|gb|EEZ14600.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1] gi|263093978|gb|EEZ17912.1| ribosomal protein S2 [Brucella melitensis bv. 2 str. 63/9] gi|264661023|gb|EEZ31284.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1] gi|264662811|gb|EEZ33072.1| 30S ribosomal protein S2 [Brucella sp. 83/13] gi|297175642|gb|EFH34989.1| 30S ribosomal protein S2 [Brucella abortus bv. 5 str. B3196] gi|306275781|gb|EFM57505.1| ribosomal protein S2 [Brucella sp. BO1] gi|306406897|gb|EFM63118.1| ribosomal protein S2 [Brucella sp. NF 2653] gi|326409180|gb|ADZ66245.1| Ribosomal protein S2 [Brucella melitensis M28] gi|326538890|gb|ADZ87105.1| ribosomal protein S2 [Brucella melitensis M5-90] Length = 256 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 165/254 (64%), Positives = 205/254 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 VEAPVEPALQAPAE 254 >gi|153009359|ref|YP_001370574.1| 30S ribosomal protein S2 [Ochrobactrum anthropi ATCC 49188] gi|166225290|sp|A6X0J1|RS2_OCHA4 RecName: Full=30S ribosomal protein S2 gi|151561247|gb|ABS14745.1| ribosomal protein S2 [Ochrobactrum anthropi ATCC 49188] Length = 256 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 164/254 (64%), Positives = 205/254 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM YI+ +RNN HI+DLSQTVP+L AL+++S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPYIYGDRNNIHILDLSQTVPLLHNALKIVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 AEAPVEPALEAPAE 254 >gi|319408395|emb|CBI82050.1| 30S ribosomal protein S2 [Bartonella schoenbuchensis R1] Length = 258 Score = 358 bits (919), Expect = 5e-97, Method: Composition-based stats. Identities = 158/248 (63%), Positives = 202/248 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTQRWNPKMAPYIYGQRNNIHIIDLAQTVPLLYQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVAQGGRVLFVGTKRQASDIIADAASRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDLMF+VDTN+E +AIQEA+RL Sbjct: 121 KILTTEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLMFIVDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +P++A+VDTN +PD +DY IPGNDD+SR+I+L+CDLVA AA+DGIARQ M D + Sbjct: 181 GVPVIAIVDTNCDPDGIDYPIPGNDDASRAISLYCDLVARAALDGIARQQGAMNIDVGAQ 240 Query: 241 GETVVHSK 248 + V Sbjct: 241 ADVPVEPA 248 >gi|227821897|ref|YP_002825867.1| 30S ribosomal protein S2 [Sinorhizobium fredii NGR234] gi|254764486|sp|C3MBQ2|RS2_RHISN RecName: Full=30S ribosomal protein S2 gi|227340896|gb|ACP25114.1| 30S ribosomal protein S2 [Sinorhizobium fredii NGR234] Length = 255 Score = 358 bits (919), Expect = 5e-97, Method: Composition-based stats. Identities = 167/255 (65%), Positives = 206/255 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QAS+ + +AAKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVANGGRVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMF++DTN+E +AI+EA+RL Sbjct: 121 EILASEASGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD+SR++AL+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQGAAGRDLGAS 240 Query: 241 GETVVHSKEGMQLEE 255 E V E Sbjct: 241 AEVPVEPALDESSEA 255 >gi|239832049|ref|ZP_04680378.1| ribosomal protein S2 [Ochrobactrum intermedium LMG 3301] gi|239824316|gb|EEQ95884.1| ribosomal protein S2 [Ochrobactrum intermedium LMG 3301] Length = 256 Score = 358 bits (919), Expect = 5e-97, Method: Composition-based stats. Identities = 164/254 (64%), Positives = 205/254 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM YI+ +RNN HI+DLSQTVP+L AL+++S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPYIYGDRNNIHILDLSQTVPLLHNALKIVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDIGAQ 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 AEAPVEPALEAPAE 254 >gi|325292737|ref|YP_004278601.1| 30S ribosomal protein S2 [Agrobacterium sp. H13-3] gi|325060590|gb|ADY64281.1| 30S ribosomal protein S2 [Agrobacterium sp. H13-3] Length = 255 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 161/257 (62%), Positives = 212/257 (82%), Gaps = 2/257 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR ++ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+LN E G++KKERL +ER+R+KL++AL GIRDMGG+PDLMF++DTN+EK+AI+EA+RL Sbjct: 121 EILNSEGTGYSKKERLTLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +DY IPGNDD+SR+I+L+CDL+A AAIDGI RQ G D ++ Sbjct: 181 GIPVVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDGILRQQGSSGRDIGAS 240 Query: 241 GETVVHSKEGMQLEEDS 257 E + ++ E + Sbjct: 241 EEAPIEP--ALEDEAGA 255 >gi|319404371|emb|CBI77974.1| 30S ribosomal protein S2 [Bartonella rochalimae ATCC BAA-1498] gi|319407374|emb|CBI81025.1| 30S ribosomal protein S2 [Bartonella sp. 1-1C] Length = 266 Score = 358 bits (918), Expect = 7e-97, Method: Composition-based stats. Identities = 161/266 (60%), Positives = 208/266 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM YI+ +RNN HIIDLSQTVP+L +AL+V+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMAPYIYGQRNNIHIIDLSQTVPLLHQALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIISDAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L+ QGFTKKERLN+ER R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 KTLSSGVQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLMFIIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+DTN +PD +DY IPGNDD+SR++ +CDL+A AA+DGIARQ S MG D + Sbjct: 181 GIPVVAVIDTNCDPDNIDYPIPGNDDASRAVTFYCDLIARAALDGIARQQSTMGVDLGAQ 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 + + + +E + S + + Sbjct: 241 VDAPMEPVLDVPVEPVLEDSATVTEE 266 >gi|225627630|ref|ZP_03785667.1| ribosomal protein S2 [Brucella ceti str. Cudo] gi|237815581|ref|ZP_04594578.1| ribosomal protein S2 [Brucella abortus str. 2308 A] gi|294852501|ref|ZP_06793174.1| 30S ribosomal protein S2 [Brucella sp. NVSL 07-0026] gi|225617635|gb|EEH14680.1| ribosomal protein S2 [Brucella ceti str. Cudo] gi|237788879|gb|EEP63090.1| ribosomal protein S2 [Brucella abortus str. 2308 A] gi|294821090|gb|EFG38089.1| 30S ribosomal protein S2 [Brucella sp. NVSL 07-0026] Length = 266 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 165/254 (64%), Positives = 205/254 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 11 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 71 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 130 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 131 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 190 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 191 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 250 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 251 VEAPVEPALQAPAE 264 >gi|150396350|ref|YP_001326817.1| 30S ribosomal protein S2 [Sinorhizobium medicae WSM419] gi|166226757|sp|A6U8K2|RS2_SINMW RecName: Full=30S ribosomal protein S2 gi|150027865|gb|ABR59982.1| ribosomal protein S2 [Sinorhizobium medicae WSM419] Length = 255 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 170/259 (65%), Positives = 211/259 (81%), Gaps = 4/259 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QAS+ + +AAKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVASGGRVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMF++DTN+E +AI+EA+RL Sbjct: 121 EILASEASGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD+SR++AL+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQGASGRDLGAS 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V LEE S++ Sbjct: 241 EEVPVE----PALEEASEA 255 >gi|319783674|ref|YP_004143150.1| ribosomal protein S2 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169562|gb|ADV13100.1| ribosomal protein S2 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 262 Score = 357 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 156/245 (63%), Positives = 201/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G+ FGH+ WNPKM YI+ RNN HIIDLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QASD V +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QG TKKERLN++R+R+KL +AL GI+DMG PDLMFV+DTN+E +AI EA+RL Sbjct: 121 EMLAGEAQGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAIAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD +D+ IPGNDD++R+I L+CDL+A AAIDGIARQ +G D ++ Sbjct: 181 GIPVVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGVDIGAS 240 Query: 241 GETVV 245 E V Sbjct: 241 IEAPV 245 >gi|148558832|ref|YP_001259080.1| 30S ribosomal protein S2 [Brucella ovis ATCC 25840] gi|209573651|sp|A5VQT3|RS2_BRUO2 RecName: Full=30S ribosomal protein S2 gi|148370089|gb|ABQ60068.1| ribosomal protein S2 [Brucella ovis ATCC 25840] Length = 254 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 161/252 (63%), Positives = 202/252 (80%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+SDT Sbjct: 1 MPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+EL Sbjct: 61 VARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L E QGFTKKERLN+ER+R+KL R L GI+DMG +PDLMF++DTN+E +AIQEA+RL I Sbjct: 121 LAGEAQGFTKKERLNLEREREKLDRTLGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E Sbjct: 181 PVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVE 240 Query: 243 TVVHSKEGMQLE 254 V E Sbjct: 241 APVEPALQAPAE 252 >gi|306841885|ref|ZP_07474565.1| ribosomal protein S2 [Brucella sp. BO2] gi|306288015|gb|EFM59417.1| ribosomal protein S2 [Brucella sp. BO2] Length = 254 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 162/252 (64%), Positives = 203/252 (80%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+SDT Sbjct: 1 MPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+EL Sbjct: 61 VARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL I Sbjct: 121 LAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E Sbjct: 181 PVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVE 240 Query: 243 TVVHSKEGMQLE 254 V E Sbjct: 241 APVEPALQAPAE 252 >gi|161511149|ref|NP_539740.2| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M] gi|38258888|sp|Q8YHH6|RS2_BRUME RecName: Full=30S ribosomal protein S2 Length = 256 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 163/254 (64%), Positives = 204/254 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+L+V TK QASD + +A RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLYVGTKRQASDIIADAGNRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 121 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 181 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 240 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 241 VEAPVEPALQAPAE 254 >gi|319405845|emb|CBI79477.1| 30S ribosomal protein S2 [Bartonella sp. AR 15-3] Length = 287 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 162/266 (60%), Positives = 208/266 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LP FT+RQLLE+GV FGH+ WNPKM YI+ ERNN HIIDLSQTVP+L +AL+V+S Sbjct: 22 MPLPDFTMRQLLEAGVHFGHQTHRWNPKMAPYIYGERNNIHIIDLSQTVPLLHQALKVVS 81 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 82 DTVACGGRVLFVGTKRQASDIISDAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 141 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L+ E QGFTKKERLN+ER R++L RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 142 KTLSSEIQGFTKKERLNLERDRERLNRALGGIKDMGSVPDLMFIIDTNKENIAIQEAKRL 201 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+DTN NPD +DY IPGNDD+SR++A +CDL+A AA+DGIARQ S MG D + Sbjct: 202 GIPVVAVIDTNCNPDNIDYPIPGNDDASRAVAFYCDLIARAALDGIARQQSTMGVDLGAQ 261 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 + + + +E + S + + Sbjct: 262 VDAPIEPALDVPVEPVLKDSVAITEE 287 >gi|15965248|ref|NP_385601.1| 30S ribosomal protein S2 [Sinorhizobium meliloti 1021] gi|307309271|ref|ZP_07588939.1| ribosomal protein S2 [Sinorhizobium meliloti BL225C] gi|307317013|ref|ZP_07596454.1| ribosomal protein S2 [Sinorhizobium meliloti AK83] gi|25009215|sp|Q92Q55|RS2_RHIME RecName: Full=30S ribosomal protein S2 gi|15074428|emb|CAC46074.1| Probable 30S ribosomal protein S2 [Sinorhizobium meliloti 1021] gi|306897101|gb|EFN27846.1| ribosomal protein S2 [Sinorhizobium meliloti AK83] gi|306900272|gb|EFN30889.1| ribosomal protein S2 [Sinorhizobium meliloti BL225C] Length = 255 Score = 354 bits (909), Expect = 7e-96, Method: Composition-based stats. Identities = 171/259 (66%), Positives = 210/259 (81%), Gaps = 4/259 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK QAS+ + +AAKRSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVASGGRVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMF++DTN+E +AI EA+RL Sbjct: 121 EILASEASGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESIAIDEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD+SR+IAL+CDL+A AAIDGIARQ G D ++ Sbjct: 181 GIPVVAVIDSNCDPDQIDYAIPGNDDASRAIALYCDLIARAAIDGIARQQGASGRDLGAS 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V LEE S++ Sbjct: 241 EEVPVE----PALEEASEA 255 >gi|17982767|gb|AAL52004.1| ssu ribosomal protein s2p [Brucella melitensis bv. 1 str. 16M] Length = 266 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 163/254 (64%), Positives = 204/254 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 11 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+L+V TK QASD + +A RSAQY VN++WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 71 DTVARGGRVLYVGTKRQASDIIADAGNRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLD 130 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL E QGFTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 131 ELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRL 190 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + Sbjct: 191 GIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQ 250 Query: 241 GETVVHSKEGMQLE 254 E V E Sbjct: 251 VEAPVEPALQAPAE 264 >gi|121602757|ref|YP_988892.1| 30S ribosomal protein S2 [Bartonella bacilliformis KC583] gi|166225242|sp|A1USD9|RS2_BARBK RecName: Full=30S ribosomal protein S2 gi|120614934|gb|ABM45535.1| ribosomal protein S2 [Bartonella bacilliformis KC583] Length = 271 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 161/264 (60%), Positives = 207/264 (78%), Gaps = 1/264 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM RYI+ +RNN HIIDLSQTVP+L +AL+++S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQTQRWNPKMARYIYGQRNNVHIIDLSQTVPLLYQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTV RGGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVVRGGRVLFVGTKRQASDIIADAASRSAQYHVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E +GFTKKERLN+ER R+KL RAL GI+DMG +PDLMFV+DTN+E +AIQEA+RL Sbjct: 121 KILAAEARGFTKKERLNLERDREKLNRALGGIKDMGSIPDLMFVIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD +DY IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 181 GIPVVAIIDTNCDPDGIDYPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGVDLGAQ 240 Query: 241 GETVVHSK-EGMQLEEDSQSSESS 263 + E + ++ + S Sbjct: 241 AYAPIEPVLEDVAVDTSAADLISE 264 >gi|319899043|ref|YP_004159136.1| 30S ribosomal protein S2 [Bartonella clarridgeiae 73] gi|319403007|emb|CBI76562.1| 30S ribosomal protein S2 [Bartonella clarridgeiae 73] Length = 279 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 157/258 (60%), Positives = 205/258 (79%), Gaps = 2/258 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM YI+ +R+N HIIDLSQTVP+L +AL+ +S Sbjct: 22 MALPDFTMRQLLEAGVHFGHQTHRWNPKMASYIYGQRSNIHIIDLSQTVPLLHQALKAVS 81 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGM+TNWKTVS SI +LR L+ Sbjct: 82 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTVSNSIHRLRKLD 141 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L + QGFTKKERL +ER R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL Sbjct: 142 KTLASDVQGFTKKERLKLERDREKLNRALGGIKDMGSVPDLMFIIDTNKENIAIQEAKRL 201 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD +DY IPGNDD+SR+++ +CDL+A AA+DGIARQ MG D + Sbjct: 202 GIPVVAIIDTNCDPDNIDYPIPGNDDASRAVSFYCDLIARAALDGIARQQGTMGVDLGAQ 261 Query: 241 GETVVHS--KEGMQLEED 256 + V ++ + + E+ Sbjct: 262 VDVPVEPVLEDSVAVAEE 279 >gi|170742936|ref|YP_001771591.1| 30S ribosomal protein S2 [Methylobacterium sp. 4-46] gi|238688055|sp|B0UCS0|RS2_METS4 RecName: Full=30S ribosomal protein S2 gi|168197210|gb|ACA19157.1| ribosomal protein S2 [Methylobacterium sp. 4-46] Length = 349 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 157/277 (56%), Positives = 209/277 (75%), Gaps = 3/277 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G FGH++ WNPKM+ +IF RNN HIIDL+QTVP L +ALQ +S Sbjct: 1 MALPDFSMRQLLEAGAHFGHQSHRWNPKMQPFIFGTRNNIHIIDLAQTVPALYQALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+D V ++A+RSAQY VNS+WLGG +TNWKT+S SIQ+LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAADVVADSARRSAQYFVNSRWLGGTLTNWKTISGSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L QG TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL Sbjct: 121 EVLAGGGQGLTKKERLMLSREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTN +PD + YV+P NDD+ R+IAL+CDL+A AAIDGI+R +G D ++ Sbjct: 181 GIPVAAIVDTNCDPDGITYVVPANDDAGRAIALYCDLIARAAIDGISRGQGALGLDIGAS 240 Query: 241 GETVVHSKEGMQLE-EDSQSSESSVLDGQ--EVAVVP 274 E V E E +Q S G+ E+ P Sbjct: 241 EEPVAEELPANLNEPEVAQVDISEPYVGEPFELLAAP 277 >gi|288958467|ref|YP_003448808.1| small subunit ribosomal protein S2 [Azospirillum sp. B510] gi|288910775|dbj|BAI72264.1| small subunit ribosomal protein S2 [Azospirillum sp. B510] Length = 259 Score = 350 bits (899), Expect = 9e-95, Method: Composition-based stats. Identities = 137/259 (52%), Positives = 188/259 (72%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P FT+RQLLE+GV FGH WNPKM +YIF RN HIIDL QTVPML +ALQ + Sbjct: 1 MTMPTFTMRQLLEAGVHFGHHTRRWNPKMNQYIFGVRNGVHIIDLEQTVPMLHRALQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK QA + + EAA + QY VN +WLGGM+TNWKT+SQSI++LR++E Sbjct: 61 DVVAGGGRVLFVGTKRQAQERIAEAAAKCGQYYVNHRWLGGMLTNWKTISQSIKRLREME 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + G TK+E L + R+RDKL+RAL GI++MGGLPD++F++DTN+E +A++EA +L Sbjct: 121 ERLGGDTSGLTKREVLELTRERDKLERALGGIKEMGGLPDVIFIIDTNKESIAVKEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AV+D+NS+PD V + IPGNDD+ R+I ++CDL A +DG+ + S G D +A Sbjct: 181 GIPVIAVLDSNSDPDGVAFPIPGNDDALRAIEMYCDLTVGAVLDGLQAEMSAAGIDVGAA 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 + + E +Q+ Sbjct: 241 EDAPAEQLPEEETAETAQA 259 >gi|83858388|ref|ZP_00951910.1| 30S ribosomal protein S2 [Oceanicaulis alexandrii HTCC2633] gi|83853211|gb|EAP91063.1| 30S ribosomal protein S2 [Oceanicaulis alexandrii HTCC2633] Length = 279 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 145/273 (53%), Positives = 203/273 (74%), Gaps = 5/273 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+ YIF ER N HIIDLSQTVPML +AL + Sbjct: 1 MALPEFSMRQLLEAGCHFGHQTHRWNPKMKEYIFGERANIHIIDLSQTVPMLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A+GGR+LFV TK QA++ + +AA R AQY +N +WLGG +TNW+T+S+SI +LR+LE Sbjct: 61 EVAAKGGRVLFVGTKRQAAEPISQAASRCAQYYMNHRWLGGTLTNWQTISKSIARLRELE 120 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 LL+ E G TKKE L + R+R+KL+R+L GI++MGG PDLMFV+DTN+E +AIQEA+ Sbjct: 121 SLLDAEGGPTGLTKKEILMLTREREKLERSLGGIKEMGGTPDLMFVIDTNKESIAIQEAK 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 RL IP+VAVVDTN +PD +D+ IPGNDD+SR+++L+CDL+A A +DGI+ + +G D Sbjct: 181 RLGIPVVAVVDTNCDPDPIDFPIPGNDDASRALSLYCDLIADAVLDGISDSQAALGMDLG 240 Query: 239 SAG---ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 + + V+ EG E+ ++ E+ ++ Sbjct: 241 ESDMPSDVVLGLDEGEAASEEPKAEEAVAVEAP 273 >gi|258543014|ref|YP_003188447.1| 30S ribosomal protein S2 [Acetobacter pasteurianus IFO 3283-01] gi|256634092|dbj|BAI00068.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-01] gi|256637152|dbj|BAI03121.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-03] gi|256640204|dbj|BAI06166.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-07] gi|256643261|dbj|BAI09216.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-22] gi|256646316|dbj|BAI12264.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-26] gi|256649369|dbj|BAI15310.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-32] gi|256652355|dbj|BAI18289.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655413|dbj|BAI21340.1| SSU ribosomal protein S2P [Acetobacter pasteurianus IFO 3283-12] Length = 268 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 140/245 (57%), Positives = 185/245 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M Y+F RN HIIDL QTV +L +ALQ I Sbjct: 1 MAMPDFTLRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVGLLDRALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GGR+LFV TK A D + EAA+R QY VN +WLGGM+TNWKT+ SI++LR +E Sbjct: 61 NTVAGGGRVLFVGTKRAAQDPIAEAARRCGQYYVNHRWLGGMLTNWKTIQGSIKRLRGIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ G TKKE L++ R+RDKL+R+L GI++MGGLPD++FV+DTN+EKLAI+EA +L Sbjct: 121 ETLDGATAGLTKKEILDMTRQRDKLERSLGGIKEMGGLPDILFVIDTNKEKLAIEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+NS+P V + IPGNDD+ R+I L+CDLV+SA +DGI+ + G D +A Sbjct: 181 GIPVVAILDSNSDPRGVTFPIPGNDDAIRAIGLYCDLVSSAVLDGISAELGASGEDIGAA 240 Query: 241 GETVV 245 E V Sbjct: 241 EELPV 245 >gi|295689597|ref|YP_003593290.1| 30S ribosomal protein S2 [Caulobacter segnis ATCC 21756] gi|295431500|gb|ADG10672.1| ribosomal protein S2 [Caulobacter segnis ATCC 21756] Length = 274 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 140/247 (56%), Positives = 188/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+RYIF R+N HIIDLSQT+P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QASD V AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L E QG +KKE L + R+RDKL+ +L GI+DMGG+PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GVLAGEAQGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD + Y IPGNDD++R++ L+CDL+A A +DG+A + G D ++ Sbjct: 181 NIPVVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQAASGVDLGAS 240 Query: 241 GETVVHS 247 V + Sbjct: 241 VAPVEPA 247 >gi|329115621|ref|ZP_08244343.1| 30S ribosomal protein S2 [Acetobacter pomorum DM001] gi|326695049|gb|EGE46768.1| 30S ribosomal protein S2 [Acetobacter pomorum DM001] Length = 265 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 140/245 (57%), Positives = 185/245 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M Y+F RN HIIDL QTV +L +ALQ I Sbjct: 1 MAMPDFTLRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVGLLDRALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GGR+LFV TK A D + EAA+R QY VN +WLGGM+TNWKT+ SI++LR +E Sbjct: 61 NTVAGGGRVLFVGTKRAAQDPIAEAARRCGQYYVNHRWLGGMLTNWKTIQGSIKRLRGIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ G TKKE L++ R+RDKL+R+L GI++MGGLPD++FV+DTN+EKLAI+EA +L Sbjct: 121 ETLDGATAGLTKKEILDMTRQRDKLERSLGGIKEMGGLPDILFVIDTNKEKLAIEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+NS+P V + IPGNDD+ R+I L+CDLV+SA +DGI+ + G D +A Sbjct: 181 GIPVVAILDSNSDPRGVTFPIPGNDDAIRAIGLYCDLVSSAVLDGISAELGASGQDIGAA 240 Query: 241 GETVV 245 E V Sbjct: 241 EELPV 245 >gi|49475410|ref|YP_033451.1| 30S ribosomal protein S2 [Bartonella henselae str. Houston-1] gi|61215541|sp|Q6G5C9|RS2_BARHE RecName: Full=30S ribosomal protein S2 gi|49238216|emb|CAF27426.1| 30S ribosomal protein s2 [Bartonella henselae str. Houston-1] Length = 257 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 158/247 (63%), Positives = 202/247 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+F++DTN+E +AIQEA+RL Sbjct: 121 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD VD+ IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 181 GIPVIAIIDTNCDPDNVDHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGIDLGAQ 240 Query: 241 GETVVHS 247 + V Sbjct: 241 ADAPVDP 247 >gi|209573724|sp|B2IGT0|RS2_BEII9 RecName: Full=30S ribosomal protein S2 Length = 336 Score = 349 bits (895), Expect = 3e-94, Method: Composition-based stats. Identities = 153/266 (57%), Positives = 205/266 (77%), Gaps = 3/266 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++R LLESG FGH+ WNPKM YIF RNN HIIDL+QTVP+L +AL+ IS Sbjct: 1 MSLPEFSMRGLLESGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA + + +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQAQEAIADAAQRSAQYYVNSRWLGGMLTNWKTISASIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L G TKKERL + R+RDKL++AL GI+DMGG+PDL+FV+DTN+E+LAIQEA RL Sbjct: 121 EILASGAGGLTKKERLMMSRERDKLEKALGGIKDMGGVPDLIFVIDTNKEQLAIQEAERL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD + Y IPGNDD+ R+I+L+CDL+A AA+DGI+R G D A Sbjct: 181 HIPVAAILDTNCDPDGITYPIPGNDDAGRAISLYCDLIARAALDGISRSQGMGGFD---A 237 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 GE ++ +E + +++ + + + Sbjct: 238 GELEAPVEDLPPVEGEYEAAPTEIFE 263 >gi|222148862|ref|YP_002549819.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] gi|221735848|gb|ACM36811.1| 30S ribosomal protein S2 [Agrobacterium vitis S4] Length = 248 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 165/248 (66%), Positives = 203/248 (81%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+SDTVARGG Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QASD + +AAKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+E+LN E Sbjct: 61 RVLFVGTKRQASDLIADAAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNSEA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLM +VDTN+EK+AI EA+RL IP+VA+ Sbjct: 121 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMVIVDTNKEKIAIDEAKRLGIPVVAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 +D+N +PDL+DY IPGNDD+SR+IAL+CDL++ AAIDGIARQ G D ++ E + Sbjct: 181 IDSNCDPDLIDYPIPGNDDASRAIALYCDLISRAAIDGIARQQGSSGRDIGASVEAPIEP 240 Query: 248 KEGMQLEE 255 E Sbjct: 241 ALEGSAEA 248 >gi|182679184|ref|YP_001833330.1| 30S ribosomal protein S2 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635067|gb|ACB95841.1| ribosomal protein S2 [Beijerinckia indica subsp. indica ATCC 9039] Length = 361 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 153/266 (57%), Positives = 205/266 (77%), Gaps = 3/266 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++R LLESG FGH+ WNPKM YIF RNN HIIDL+QTVP+L +AL+ IS Sbjct: 26 MSLPEFSMRGLLESGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKAIS 85 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA + + +AA+RSAQY VNS+WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 86 DTVARGGRVLFVGTKRQAQEAIADAAQRSAQYYVNSRWLGGMLTNWKTISASIQRLRKLD 145 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L G TKKERL + R+RDKL++AL GI+DMGG+PDL+FV+DTN+E+LAIQEA RL Sbjct: 146 EILASGAGGLTKKERLMMSRERDKLEKALGGIKDMGGVPDLIFVIDTNKEQLAIQEAERL 205 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD + Y IPGNDD+ R+I+L+CDL+A AA+DGI+R G D A Sbjct: 206 HIPVAAILDTNCDPDGITYPIPGNDDAGRAISLYCDLIARAALDGISRSQGMGGFD---A 262 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 GE ++ +E + +++ + + + Sbjct: 263 GELEAPVEDLPPVEGEYEAAPTEIFE 288 >gi|240850304|ref|YP_002971697.1| 30S ribosomal protein S2 [Bartonella grahamii as4aup] gi|240267427|gb|ACS51015.1| 30S ribosomal protein S2 [Bartonella grahamii as4aup] Length = 259 Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats. Identities = 159/259 (61%), Positives = 205/259 (79%), Gaps = 1/259 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+FV+DTN+E +A+QEA+RL Sbjct: 121 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTNKENIALQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD V + IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 181 GIPVIAIIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGIDLGAQ 240 Query: 241 GETVVHSK-EGMQLEEDSQ 258 + V E + E S+ Sbjct: 241 VDAPVEPILEENAVAEVSE 259 >gi|197105243|ref|YP_002130620.1| 30S ribosomal protein S2 [Phenylobacterium zucineum HLK1] gi|238690150|sp|B4RBZ4|RS2_PHEZH RecName: Full=30S ribosomal protein S2 gi|196478663|gb|ACG78191.1| 30S ribosomal protein S2 [Phenylobacterium zucineum HLK1] Length = 295 Score = 347 bits (891), Expect = 9e-94, Method: Composition-based stats. Identities = 140/247 (56%), Positives = 189/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM++YIF R+N HIIDLSQ++P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDKYIFGARSNIHIIDLSQSIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGRILFV TK QAS+ + AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAGGGRILFVGTKRQASEPIATAAKRCAQYYVNHRWLGGTLTNWRTVSNSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L E QG +KKE L + R+RDKL+ +L GI+DMGG+PDLMFV+DTN+E +AIQEAR+L Sbjct: 121 SVLGGEGQGRSKKELLQLTRERDKLELSLGGIKDMGGIPDLMFVIDTNKEAIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN NPD + Y IPGNDD++R+I L+CDL+A A +DG+A + G D ++ Sbjct: 181 NIPVIAILDTNCNPDGITYPIPGNDDAARAIQLYCDLMADAILDGLAAGQAASGVDLGAS 240 Query: 241 GETVVHS 247 V + Sbjct: 241 EAPVEPT 247 >gi|114327943|ref|YP_745100.1| 30S ribosomal protein S2 [Granulibacter bethesdensis CGDNIH1] gi|122327094|sp|Q0BSM5|RS2_GRABC RecName: Full=30S ribosomal protein S2 gi|114316117|gb|ABI62177.1| SSU ribosomal protein S2P [Granulibacter bethesdensis CGDNIH1] Length = 258 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 138/255 (54%), Positives = 190/255 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH WNP+M +IF RN HI+DL QTVP+L ++L+ I Sbjct: 1 MAMPEFTLRQLLEAGVHFGHHTRRWNPRMAPFIFGVRNQVHILDLQQTVPLLDRSLRAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK A++ V E+A+R QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DVVAGGGRVLFVGTKRAAAEYVAESAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L + G TKKE L+I R R+KL+RAL GI+DMGGLPD++F++DTN+EKLA++EA +L Sbjct: 121 EMLAGDTTGLTKKEVLDITRDREKLERALGGIKDMGGLPDILFIIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+NS+P V Y IPGNDD+ R+I ++CDLVASA +DGI+ + G D +A Sbjct: 181 GIPVVAVLDSNSDPSGVTYPIPGNDDAIRAITMYCDLVASAVLDGISAEMIASGRDLGAA 240 Query: 241 GETVVHSKEGMQLEE 255 E + E+ Sbjct: 241 EELAPEILPEPEAEQ 255 >gi|296445471|ref|ZP_06887428.1| ribosomal protein S2 [Methylosinus trichosporium OB3b] gi|296257037|gb|EFH04107.1| ribosomal protein S2 [Methylosinus trichosporium OB3b] Length = 351 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 154/262 (58%), Positives = 203/262 (77%), Gaps = 1/262 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+R LLESG FGH++ WNPKM +IF RNN HIIDL+QTVP+L +AL+V+S Sbjct: 1 MALPDFTMRGLLESGAHFGHQSHRWNPKMAPFIFGARNNIHIIDLAQTVPLLHQALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA D + +AA+RSAQY +NS+WLGG +TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQAQDQIADAARRSAQYYINSRWLGGTLTNWKTISGSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKERL + R+++KL++AL GI+DMGG PDL+FV+DTN+E+LAI+EA RL Sbjct: 121 EQLSVGSGGVTKKERLLLTREKEKLEKALGGIKDMGGTPDLLFVIDTNKEQLAIKEAGRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD + Y IPGNDD+ R+IAL+CDL+A AAIDGI+R G D + Sbjct: 181 KIPVVAILDTNCDPDGITYPIPGNDDAGRAIALYCDLIARAAIDGISRSQGLSGMDIGAM 240 Query: 241 GETVVHSKEGMQLEEDSQSSES 262 + G + ED +S E+ Sbjct: 241 EAPMAEPALGT-VHEDLRSPET 261 >gi|315121996|ref|YP_004062485.1| 30S ribosomal protein S2 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495398|gb|ADR51997.1| 30S ribosomal protein S2 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 289 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 219/278 (78%), Positives = 243/278 (87%), Gaps = 2/278 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT++QLLESGVQFGHR FLWNPKM+ YIFCER+NTHIIDLSQTVPML KALQV+S Sbjct: 1 MAIPNFTMQQLLESGVQFGHRKFLWNPKMKPYIFCERSNTHIIDLSQTVPMLHKALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFVATK QAS+ VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL+ Sbjct: 61 DTVARGGRILFVATKPQASNVVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL+KENQ FTKKERLNIER+RDKLKRALDGIRDMGGLPDLMF++DTNREKLAI+EARRL Sbjct: 121 ELLSKENQDFTKKERLNIERRRDKLKRALDGIRDMGGLPDLMFIIDTNREKLAIEEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIPIVAVVD+N NPDL+DY+IPGNDDS+RSIALFCDLVASAAIDGIARQHSYMG DTK Sbjct: 181 RIPIVAVVDSNCNPDLIDYIIPGNDDSARSIALFCDLVASAAIDGIARQHSYMGGDTKPL 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 V +E + E + +++ EVA + S Sbjct: 241 DNDVKSLEEDSKNLEGEVAPSANL--EGEVAPSADSTS 276 >gi|220921690|ref|YP_002496991.1| 30S ribosomal protein S2 [Methylobacterium nodulans ORS 2060] gi|254764484|sp|B8IQY6|RS2_METNO RecName: Full=30S ribosomal protein S2 gi|219946296|gb|ACL56688.1| ribosomal protein S2 [Methylobacterium nodulans ORS 2060] Length = 349 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 157/277 (56%), Positives = 208/277 (75%), Gaps = 3/277 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G FGH+ WNPKM+ YIF RNN HIIDL+QTVP L +ALQ +S Sbjct: 1 MALPDFSMRQLLEAGAHFGHQAHRWNPKMQSYIFGTRNNIHIIDLAQTVPALYQALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+D V E+A+RSAQY VNS+WLGG +TNWKT+S SIQ+LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAADVVAESARRSAQYFVNSRWLGGTLTNWKTISGSIQRLRKVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L QG TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL Sbjct: 121 EILAGGGQGLTKKERLMLSREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTNS+PD + YV+P NDD+ R+IAL+CDL+A AAIDGI+R +G D ++ Sbjct: 181 GIPVAAIVDTNSDPDGITYVVPANDDAGRAIALYCDLIARAAIDGISRGQGALGMDLGAS 240 Query: 241 GETVVHSKEGMQLEEDSQ---SSESSVLDGQEVAVVP 274 E + E + +E V + E+ P Sbjct: 241 EEPLAEELPANLNEPEVAHLDIAEPYVGEPFELLAAP 277 >gi|330994744|ref|ZP_08318666.1| 30S ribosomal protein S2 [Gluconacetobacter sp. SXCC-1] gi|329758005|gb|EGG74527.1| 30S ribosomal protein S2 [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 145/261 (55%), Positives = 196/261 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH WNP+M Y+F RN HIIDL QTVPML +AL+ I Sbjct: 1 MAMPEFTMRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVPMLDRALKAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D + EAAKR QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DTVAGGGRVLFVGTKRAAADQIAEAAKRCGQYYVNHRWLGGMLTNWKTITGSIKRLRSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L QG TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L Sbjct: 121 EMLENGTQGLTKKEVLDITRDREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+NS+P V + IPGNDD+ R+IAL+C+LV+SA +DGI+ + G D ++ Sbjct: 181 GIPVVAVLDSNSDPRGVTFPIPGNDDAIRAIALYCELVSSAVLDGISAELGASGEDFGAS 240 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 E V + E + S+E Sbjct: 241 EELPVDPAVETAVTEAAASAE 261 >gi|146341069|ref|YP_001206117.1| 30S ribosomal protein S2 [Bradyrhizobium sp. ORS278] gi|166225244|sp|A4YVG6|RS2_BRASO RecName: Full=30S ribosomal protein S2 gi|146193875|emb|CAL77892.1| 30S ribosomal protein S2 [Bradyrhizobium sp. ORS278] Length = 329 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 158/268 (58%), Positives = 205/268 (76%), Gaps = 10/268 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L ALQ +S Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHTALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKR AQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDNVADAAKRCAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L + E +TKKERL ++R+RDKL R+L GI+DMGGLPD++FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGEANSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDMIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + YV+PGNDD+ R+I+L+CDL+A AAIDGI+R +G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYVVPGNDDAGRAISLYCDLIARAAIDGISRAQGELGIDVGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + LEED ++ +S G Sbjct: 241 SA---------APLEEDLPAASASTFQG 259 >gi|49474296|ref|YP_032338.1| 30S ribosomal protein S2 [Bartonella quintana str. Toulouse] gi|61215535|sp|Q6FZN0|RS2_BARQU RecName: Full=30S ribosomal protein S2 gi|49239800|emb|CAF26190.1| 30s ribosomal protein s2 [Bartonella quintana str. Toulouse] Length = 257 Score = 345 bits (884), Expect = 5e-93, Method: Composition-based stats. Identities = 159/245 (64%), Positives = 202/245 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM RYI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMIRYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QASD + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+F++DTN+E +AIQEA+RL Sbjct: 121 KILATETQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTNKENIAIQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN NPD VD+ IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 181 GIPVIAIIDTNCNPDNVDHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGIDLGAQ 240 Query: 241 GETVV 245 + V Sbjct: 241 ADAPV 245 >gi|167646767|ref|YP_001684430.1| 30S ribosomal protein S2 [Caulobacter sp. K31] gi|189044929|sp|B0SZ21|RS2_CAUSK RecName: Full=30S ribosomal protein S2 gi|167349197|gb|ABZ71932.1| ribosomal protein S2 [Caulobacter sp. K31] Length = 313 Score = 345 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 136/247 (55%), Positives = 188/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+RYIF R+N HIIDLSQ++P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQSIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QASD V AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ E+ G +KKE L + R+RDKL+ +L GI+DMGG+PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GIMGGESAGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD + Y IPGNDD++R++ L+CDL+A A +DG+A + G D ++ Sbjct: 181 NIPVVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQANSGVDLGAS 240 Query: 241 GETVVHS 247 + + Sbjct: 241 IAPIEPT 247 >gi|159044097|ref|YP_001532891.1| 30S ribosomal protein S2 [Dinoroseobacter shibae DFL 12] gi|189044937|sp|A8LK91|RS2_DINSH RecName: Full=30S ribosomal protein S2 gi|157911857|gb|ABV93290.1| ribosomal protein S2 [Dinoroseobacter shibae DFL 12] Length = 259 Score = 345 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 143/242 (59%), Positives = 185/242 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F IRQLLE+GV FGH+ WNP+M YI+ +RN HI+DL+QTVPML +ALQ + Sbjct: 1 MALPDFNIRQLLEAGVHFGHQTQRWNPRMAPYIYGDRNGIHIMDLTQTVPMLDQALQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + EAA+R AQY +N +WLGG +TNWKTVS SI +L+ ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAQKPIAEAAERCAQYYMNHRWLGGTLTNWKTVSNSIGRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EAMEGGFEGLTKKERLGMERDQGKLQASLGGIREMGGVPDLIFVIDVKKEDLAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +PD VDYVIPGNDD++R+IAL+CDLVA AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPDGVDYVIPGNDDAARAIALYCDLVARAALDGMSAQLGAAGVDLGAL 240 Query: 241 GE 242 E Sbjct: 241 EE 242 >gi|296536129|ref|ZP_06898258.1| 30S ribosomal protein S2 [Roseomonas cervicalis ATCC 49957] gi|296263541|gb|EFH10037.1| 30S ribosomal protein S2 [Roseomonas cervicalis ATCC 49957] Length = 274 Score = 344 bits (883), Expect = 7e-93, Method: Composition-based stats. Identities = 135/247 (54%), Positives = 180/247 (72%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+ ++RQLLE+GV FGH WNP+M YIF RN HI+DL QTVPM+ +AL+ I Sbjct: 1 MAMPEVSLRQLLEAGVHFGHHTRRWNPRMAPYIFGVRNQVHILDLQQTVPMMDRALRAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK A++ V EAA R QY VN +WLGGM+TNWKT++ SI++L+ ++ Sbjct: 61 DVVAGGGRVLFVGTKKSAAEYVAEAATRCGQYYVNHRWLGGMLTNWKTITGSIKRLKQMD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L QG TKKE L + R+R+KL RAL GIR+MGGLPD++FV+D +EKLAI+EA +L Sbjct: 121 EQLGGNTQGLTKKEVLMLTREREKLDRALGGIREMGGLPDIIFVIDVVKEKLAIEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVD+N++P+ V + IPGNDD+ R+I L+CD+VA+A DGI+ + G D S Sbjct: 181 GIPVVAVVDSNADPEGVAFPIPGNDDAIRAINLYCDMVAAAVFDGISAELQASGVDLGSV 240 Query: 241 GETVVHS 247 E Sbjct: 241 EELPAEE 247 >gi|170749850|ref|YP_001756110.1| 30S ribosomal protein S2 [Methylobacterium radiotolerans JCM 2831] gi|209573668|sp|B1LTQ8|RS2_METRJ RecName: Full=30S ribosomal protein S2 gi|170656372|gb|ACB25427.1| ribosomal protein S2 [Methylobacterium radiotolerans JCM 2831] Length = 355 Score = 344 bits (882), Expect = 8e-93, Method: Composition-based stats. Identities = 155/276 (56%), Positives = 207/276 (75%), Gaps = 3/276 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ F++RQLLE+G FGH+ WNPKM+ YIF RNN HIIDL+QTVP + +ALQ +S Sbjct: 1 MAV-DFSMRQLLEAGAHFGHQAHRWNPKMQPYIFGTRNNIHIIDLAQTVPAMHQALQAVS 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SI +LR + Sbjct: 60 DTVAKGGRVLFVGTKRQAADTIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSISRLRKVT 119 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L G TKKERL + R+++KL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA RL Sbjct: 120 ETLETGGPGLTKKERLMLSREKEKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEANRL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAIDGI+R G D ++ Sbjct: 180 GIPVAAIVDTNCNPDGISYIVPANDDAGRAIALYCDLIAKAAIDGISRAQGSSGMDLGAS 239 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 E + E ++ + + ES LD +VA++ E Sbjct: 240 EEPMAE--ELPANDDAAVTVESDALDPADVAMLAES 273 >gi|154248359|ref|YP_001419317.1| 30S ribosomal protein S2 [Xanthobacter autotrophicus Py2] gi|238686807|sp|A7INR6|RS2_XANP2 RecName: Full=30S ribosomal protein S2 gi|154162444|gb|ABS69660.1| ribosomal protein S2 [Xanthobacter autotrophicus Py2] Length = 334 Score = 344 bits (882), Expect = 9e-93, Method: Composition-based stats. Identities = 154/262 (58%), Positives = 204/262 (77%), Gaps = 5/262 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH++ WNPKM YIF RNN HIIDLSQTVP L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQSHRWNPKMAPYIFGVRNNIHIIDLSQTVPALHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + V +AA+RSAQY VNS+WLGGM+TNWKT+S SI +L+ LE Sbjct: 61 DTVAQGGRVLFVGTKRQAQEQVADAARRSAQYYVNSRWLGGMLTNWKTISNSIARLKKLE 120 Query: 121 ELLNK--ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E+L+ + G+TKKERL + R++DKL +AL GIRDMGGLPDL+FV+DTN+E +A++EA+ Sbjct: 121 EMLSGPEQGSGYTKKERLTLSREKDKLDKALGGIRDMGGLPDLLFVIDTNKEDIAVKEAQ 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 RL IP+ A++DTN +PD + + +PGNDD+ R+I L+C+LVA AAIDGI R HS +G D Sbjct: 181 RLGIPVAAILDTNCDPDGIAFPVPGNDDAGRAIQLYCELVARAAIDGIGRGHSDLGIDVG 240 Query: 239 SAGETVVHSKEGMQLEEDSQSS 260 + +V E + +E + SS Sbjct: 241 AEEAPLV---EDLPVETGAWSS 259 >gi|323137304|ref|ZP_08072382.1| ribosomal protein S2 [Methylocystis sp. ATCC 49242] gi|322397291|gb|EFX99814.1| ribosomal protein S2 [Methylocystis sp. ATCC 49242] Length = 338 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 151/238 (63%), Positives = 191/238 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+R LLE+G FGH+ WNPKM YIF RNN HIIDL+QTVP+L +AL+ +S Sbjct: 1 MALPDFTMRGLLEAGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKTVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D + +AAKRSAQY +NS+WLGG +TNWKT+S SI +LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDQIADAAKRSAQYYINSRWLGGTLTNWKTISGSINRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L+ G TKKERL + R+RDKL++AL GIRDMGG PDL+FV+DTN+E+LAI+EA RL Sbjct: 121 EMLSAGASGVTKKERLLLTRERDKLEKALGGIRDMGGTPDLIFVIDTNKEQLAIKEANRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +IP+VAV+DTN +PD V + IPGNDD+ R+IAL+CDL+A AAIDGI+R +G D Sbjct: 181 KIPVVAVLDTNCDPDGVTHPIPGNDDAGRAIALYCDLIARAAIDGISRSQGSLGVDLG 238 >gi|209573723|sp|A9ISJ8|RS2_BART1 RecName: Full=30S ribosomal protein S2 Length = 266 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 154/243 (63%), Positives = 199/243 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 1 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QAS+ + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 61 DTVARGGRILFVGTKRQASEIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+FV+DTN+E +A+QEA+RL Sbjct: 121 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTNKENIALQEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD V + IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 181 GIPVIAIIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGIDLGAQ 240 Query: 241 GET 243 + Sbjct: 241 VDA 243 >gi|90419592|ref|ZP_01227502.1| 30S ribosomal protein S2 [Aurantimonas manganoxydans SI85-9A1] gi|90336529|gb|EAS50270.1| 30S ribosomal protein S2 [Aurantimonas manganoxydans SI85-9A1] Length = 284 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 156/239 (65%), Positives = 197/239 (82%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH+ WNPKM YIF RNN HI+DL QTVP+L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQTHRWNPKMSSYIFGARNNIHILDLGQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QASD V +AA RSAQY VN++WLGGM+TNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASDIVADAANRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E QGFTKKERL ++R+RDKL RAL GI+DMGG+PD++F++DTN+E +AI+EA+RL Sbjct: 121 EMLAGEAQGFTKKERLTLQRERDKLDRALGGIKDMGGVPDMIFIIDTNKESIAIEEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPIVAVVD+N +P +DY IPGNDD++R+I L+CDL+A AA+DGIARQ G D + Sbjct: 181 HIPIVAVVDSNCDPAPIDYPIPGNDDAARAITLYCDLIARAAVDGIARQQGDSGMDIGA 239 >gi|163851497|ref|YP_001639540.1| 30S ribosomal protein S2 [Methylobacterium extorquens PA1] gi|218530304|ref|YP_002421120.1| 30S ribosomal protein S2 [Methylobacterium chloromethanicum CM4] gi|209573661|sp|A9W4G3|RS2_METEP RecName: Full=30S ribosomal protein S2 gi|254764483|sp|B7KZG0|RS2_METC4 RecName: Full=30S ribosomal protein S2 gi|163663102|gb|ABY30469.1| ribosomal protein S2 [Methylobacterium extorquens PA1] gi|218522607|gb|ACK83192.1| ribosomal protein S2 [Methylobacterium chloromethanicum CM4] Length = 355 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 157/277 (56%), Positives = 206/277 (74%), Gaps = 4/277 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ F++RQLLE+G FGH++ WNPKM+ YIF RNN HIIDL+QTVP L ALQ +S Sbjct: 1 MAV-DFSMRQLLEAGAHFGHQSHRWNPKMQPYIFGTRNNIHIIDLAQTVPALHAALQAVS 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SIQ+LR ++ Sbjct: 60 DTVARGGRVLFVGTKRQAADSIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSIQRLRKVD 119 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L G TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL Sbjct: 120 ETLEGGAVGLTKKERLMLTREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAQRL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAI+GI R +G D ++ Sbjct: 180 GIPVAAIVDTNCNPDGISYIVPANDDAGRAIALYCDLIARAAIEGIGRGQGALGLDVGAS 239 Query: 241 GETVVHSKEGMQLEED-SQSSESSVLDGQEVAVVPEL 276 E E +D + S S + +VA + E Sbjct: 240 EEPTAE--ELPPANDDVAVSVASDAIAPADVAALAES 274 >gi|114799137|ref|YP_760472.1| 30S ribosomal protein S2 [Hyphomonas neptunium ATCC 15444] gi|122942421|sp|Q0C1C1|RS2_HYPNA RecName: Full=30S ribosomal protein S2 gi|114739311|gb|ABI77436.1| ribosomal protein S2 [Hyphomonas neptunium ATCC 15444] Length = 263 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 132/263 (50%), Positives = 191/263 (72%), Gaps = 1/263 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNP+M+ YI+ ER+ HI+DLS TVP L ++L + Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPRMKPYIYGERSGIHIMDLSHTVPALHQSLVFVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + V EAA+R AQY +N +WLGG +TNW TVS SI++LR+L Sbjct: 61 DTVAKGGRVLFVGTKRQAQEPVAEAAQRCAQYYMNHRWLGGTLTNWSTVSNSIKQLRELN 120 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + G TKKE L+++R+RDKL+++L GI DMGGLP + V+DTN+E +A+QEAR+ Sbjct: 121 AMFESGGGSGLTKKELLDLQRRRDKLQKSLGGIADMGGLPAAIVVIDTNKEAIAVQEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAV+DTN NP D+ PGNDD++R+I+L+C+L A A +DG+A + +G D + Sbjct: 181 LGIPVVAVLDTNCNPSDADFGFPGNDDAARAISLYCNLFADAVLDGLAESTAGLGVDLGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 + + + ++L ++ + E+ Sbjct: 241 SADIASLADADVKLADEEAAGEA 263 >gi|312114733|ref|YP_004012329.1| ribosomal protein S2 [Rhodomicrobium vannielii ATCC 17100] gi|311219862|gb|ADP71230.1| ribosomal protein S2 [Rhodomicrobium vannielii ATCC 17100] Length = 351 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 157/275 (57%), Positives = 207/275 (75%), Gaps = 5/275 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LPQFT+RQLLE+GV FGH+ WNPKM Y+F RN HIIDLS+TVP+L +A+ S Sbjct: 1 MTLPQFTMRQLLEAGVHFGHQTHRWNPKMSDYLFGTRNKIHIIDLSKTVPLLHQAVVTAS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA+GGRILFV TK QASD V +AAKRSAQY VN +WLGGM+TNWKT++ SI++LR L+ Sbjct: 61 DVVAQGGRILFVGTKRQASDAVADAAKRSAQYYVNHRWLGGMLTNWKTITNSIKRLRYLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L++ E QGFTKKE LN+ R+RDKL++ L GI+DMGG+PDL+FV+DTN+E +AIQEA++L Sbjct: 121 DLVSGEGQGFTKKELLNLTRERDKLEQELGGIKDMGGVPDLLFVIDTNKESIAIQEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP++A++D+NSNPD V+Y IPGNDD+ R+I L+CDL++ AAIDGI R G D A Sbjct: 181 KIPVIAIIDSNSNPDGVNYPIPGNDDAGRAITLYCDLISRAAIDGIERAQGVSGIDIGEA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E + LEE ++ ++ D V V + Sbjct: 241 EEIA-----EVALEEVPEAPATNGKDEAPVVVATK 270 >gi|158423317|ref|YP_001524609.1| 30S ribosomal protein S2 [Azorhizobium caulinodans ORS 571] gi|172047939|sp|A8I460|RS2_AZOC5 RecName: Full=30S ribosomal protein S2 gi|158330206|dbj|BAF87691.1| ribosomal protein S2 [Azorhizobium caulinodans ORS 571] Length = 333 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 159/255 (62%), Positives = 203/255 (79%), Gaps = 4/255 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH++ WNPKM +YIF RNN HIIDLSQTVP L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQSHRWNPKMSQYIFGVRNNIHIIDLSQTVPALHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AA+RSAQY VNS+WLGGM+TNWKT+S SI +L+ LE Sbjct: 61 DTVAQGGRVLFVGTKRQAQDQVADAARRSAQYYVNSRWLGGMLTNWKTISNSIARLKKLE 120 Query: 121 ELLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ E G+TKKERL + R+++KL+RAL GIRDMGGLPDL+FV+DTN+E +A++EA+R Sbjct: 121 EMLSGPEQGGYTKKERLTLSREKEKLERALGGIRDMGGLPDLLFVIDTNKEDIAVKEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++DTNS+PD + Y +PGNDD+ R+I L+CDLVA AAIDGI R H +G D Sbjct: 181 LGIPVAAILDTNSDPDGITYPVPGNDDAGRAIQLYCDLVARAAIDGIGRGHVDLGVDL-- 238 Query: 240 AGETVVHSKEGMQLE 254 GET EG+ E Sbjct: 239 -GETEAPLSEGLPAE 252 >gi|169630278|ref|YP_001703927.1| 30s ribosomal protein S2 [Mycobacterium abscessus ATCC 19977] gi|238688779|sp|B1MDF2|RS2_MYCA9 RecName: Full=30S ribosomal protein S2 gi|169242245|emb|CAM63273.1| 30s ribosomal protein S2 [Mycobacterium abscessus] Length = 277 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 121/264 (45%), Positives = 177/264 (67%), Gaps = 2/264 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGSVMFVGTKKQAQEPIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P +FVVDTN+E LA+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIFVVDTNKEHLAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IPI+A++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ + G D K A Sbjct: 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAIAEGLQARSGLAGGDEKPEA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSV 264 GE + ++ + + + E+S Sbjct: 241 GEPLAEWEQELLASAVATTDEASA 264 >gi|209964520|ref|YP_002297435.1| 30S ribosomal protein S2 [Rhodospirillum centenum SW] gi|238058200|sp|B6ISV1|RS2_RHOCS RecName: Full=30S ribosomal protein S2 gi|209957986|gb|ACI98622.1| ribosomal protein S2 [Rhodospirillum centenum SW] Length = 261 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 142/261 (54%), Positives = 188/261 (72%), Gaps = 1/261 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNPKM Y+F RN HIIDL Q+VPM+ +A+Q + Sbjct: 1 MAIPTFTMRQLLEAGVHFGHHTRRWNPKMAPYLFGVRNGVHIIDLEQSVPMMYRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK A + V E+AKR QY VN +WLGGM+TNWKT+SQSI++L++++ Sbjct: 61 DVVAGGGRVLFVGTKRAAQEKVAESAKRCGQYYVNHRWLGGMLTNWKTISQSIRRLKEMD 120 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L E G TKKE LN+ R+R+KL+RAL GIRDMGGLPDL+F++DTN+E LAIQEA + Sbjct: 121 EQLAVGEQSGRTKKELLNMTREREKLERALGGIRDMGGLPDLLFIIDTNKESLAIQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVD+NS+PD V + +PGNDD+ R+I +C+L+A A +DG+ + S G D + Sbjct: 181 LGIPVVAVVDSNSDPDGVTFPVPGNDDALRAIDTYCELIAGAVLDGLQAEMSAAGIDLGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSS 260 A E E+ + Sbjct: 241 AEEAPEEVLPAEGAEQAPAQA 261 >gi|163760883|ref|ZP_02167962.1| putative 30S ribosomal protein S2 [Hoeflea phototrophica DFL-43] gi|162281927|gb|EDQ32219.1| putative 30S ribosomal protein S2 [Hoeflea phototrophica DFL-43] Length = 262 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 153/240 (63%), Positives = 196/240 (81%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ +IF RNN HI+DL QTVPML +AL+++SDTV++GG Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPFIFGARNNLHILDLGQTVPMLNQALKLVSDTVSKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QAS+ V +AA RSAQY VN++WLGGM+TNWKT+S SIQ+LR L+E+L E Sbjct: 61 RVLFVGTKRQASEIVADAASRSAQYYVNARWLGGMLTNWKTISHSIQRLRKLDEILQAEA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 GFTKKERLN+ER+R+KL RAL GIRDMGG PDLMFV+DTN+E +AIQEA+RL IP+VA+ Sbjct: 121 SGFTKKERLNLEREREKLDRALGGIRDMGGTPDLMFVIDTNKEGIAIQEAKRLGIPVVAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 +D+N +PD+VDY IPGNDD+SR+I+L+CDL++ A IDGIARQ G D + V + Sbjct: 181 IDSNCDPDVVDYPIPGNDDASRAISLYCDLISRACIDGIARQQGASGVDLGAMDAPVEPA 240 >gi|163868101|ref|YP_001609305.1| 30S ribosomal protein S2 [Bartonella tribocorum CIP 105476] gi|161017752|emb|CAK01310.1| 30S ribosomal protein S2 [Bartonella tribocorum CIP 105476] Length = 296 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 154/243 (63%), Positives = 199/243 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+ QLLE+GV FGH+ WNPKM YI+ +RNN HIIDL+QTVP+L +AL+++S Sbjct: 31 MALPDFTMHQLLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVS 90 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QAS+ + +AA RSAQY VN++WLGGM+TNWKT+S SI +LR L+ Sbjct: 91 DTVARGGRILFVGTKRQASEIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLD 150 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L E QGFTKKERLN+ER R+KL RAL GI+DMG +PDL+FV+DTN+E +A+QEA+RL Sbjct: 151 KILAAEAQGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTNKENIALQEAKRL 210 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD V + IPGNDD+SR+I+L+CDL A AA+DGIARQ MG D + Sbjct: 211 GIPVIAIIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGIDLGAQ 270 Query: 241 GET 243 + Sbjct: 271 VDA 273 >gi|85716996|ref|ZP_01047959.1| 30S ribosomal protein S2 [Nitrobacter sp. Nb-311A] gi|85696198|gb|EAQ34093.1| 30S ribosomal protein S2 [Nitrobacter sp. Nb-311A] Length = 332 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 153/257 (59%), Positives = 199/257 (77%), Gaps = 1/257 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP++ +ALQ +S Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLMHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYIVPGNDDAGRAISLYCDLIARAAIDGISRAQGDSGIDVGA 240 Query: 240 AGETVVHSKEGMQLEED 256 + E V Sbjct: 241 SVEPVQEELPAAAQPAG 257 >gi|299135001|ref|ZP_07028192.1| ribosomal protein S2 [Afipia sp. 1NLS2] gi|298589978|gb|EFI50182.1| ribosomal protein S2 [Afipia sp. 1NLS2] Length = 332 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 157/257 (61%), Positives = 196/257 (76%), Gaps = 1/257 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L +ALQ +S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V EAAKRSAQY VNS+WLGG +TNWKTVS SI++LR LE Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVAEAAKRSAQYFVNSRWLGGTLTNWKTVSGSIKRLRQLE 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L + E +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EMLGSAEGNQYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + YV+PGNDD+ R+IAL+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYVVPGNDDAGRAIALYCDLIARAAIDGISRGQGDAGIDIGA 240 Query: 240 AGETVVHSKEGMQLEED 256 + Sbjct: 241 MANPPKEDAAAAPKADG 257 >gi|325001879|ref|ZP_08122991.1| 30S ribosomal protein S2 [Pseudonocardia sp. P1] Length = 286 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 118/281 (41%), Positives = 180/281 (64%), Gaps = 5/281 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYEFVRET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L++LE + Sbjct: 61 VAHGGTIMFVGTKKQAQEAIAEEAGRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TK+E L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKREILTLTREKDKLEKTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V+++DTN +PD VD+ IPGNDD+ RS AL ++A AA DG+ + G +A Sbjct: 181 IPVVSILDTNCDPDEVDFPIPGNDDAIRSAALLTKVIAKAAADGLVSRGQRRGEGEAAAE 240 Query: 242 ETVVHSKE----GMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + + ++ G ++ D S ++ DG + A P S Sbjct: 241 QPLAEWEQDVLAGNEVGSDGASLAAAGGDGADSAPAPASSS 281 >gi|115524560|ref|YP_781471.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris BisA53] gi|122296190|sp|Q07NJ3|RS2_RHOP5 RecName: Full=30S ribosomal protein S2 gi|115518507|gb|ABJ06491.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris BisA53] Length = 330 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 150/248 (60%), Positives = 196/248 (79%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L AL+ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLLHNALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDVVADAAKRSAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELLNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LN + G +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EMLNSGDAGSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLLFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I L+CDLVA A IDG++R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGISYLVPGNDDAGRAITLYCDLVARAVIDGLSRAQGDSGYDAGA 240 Query: 240 AGETVVHS 247 + + Sbjct: 241 MAQPLREE 248 >gi|209885084|ref|YP_002288941.1| ribosomal protein S2 [Oligotropha carboxidovorans OM5] gi|229470518|sp|B6JH66|RS2_OLICO RecName: Full=30S ribosomal protein S2 gi|209873280|gb|ACI93076.1| ribosomal protein S2 [Oligotropha carboxidovorans OM5] Length = 332 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 158/256 (61%), Positives = 199/256 (77%), Gaps = 2/256 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNPKM +IF RNN HIIDL+QTVP++ +ALQ +S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQAHRWNPKMADFIFGARNNIHIIDLAQTVPLMHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKTVS SI++LR LE Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTVSGSIRRLRQLE 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L + E +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EMLGSAEGSQYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + YV+PGNDD+ R+IAL+CDL+A AAIDGI+R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYVVPGNDDAGRAIALYCDLIARAAIDGISRAQGDAGIDVGA 240 Query: 240 -AGETVVHSKEGMQLE 254 A + E + E Sbjct: 241 LAAPPQEDAVEASKTE 256 >gi|154253635|ref|YP_001414459.1| 30S ribosomal protein S2 [Parvibaculum lavamentivorans DS-1] gi|171769680|sp|A7HY19|RS2_PARL1 RecName: Full=30S ribosomal protein S2 gi|154157585|gb|ABS64802.1| ribosomal protein S2 [Parvibaculum lavamentivorans DS-1] Length = 253 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 146/253 (57%), Positives = 197/253 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKME ++F +RNN HIIDL+QTVP+L +AL + Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMEPFLFGDRNNIHIIDLAQTVPLLHQALVTVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK QASD V AA++ AQY +N +WLGGM+TNWKT+S SI++LR L+ Sbjct: 61 DVVAGGGRVLFVGTKRQASDPVAAAARQCAQYYINHRWLGGMLTNWKTISNSIRRLRQLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L E +G TKKE LN+ R+RDKL+RA+ GI+DMGGLPDL+FV+DTN+E++AIQEAR+L Sbjct: 121 EMLAGEAKGLTKKEVLNLTRERDKLERAIGGIKDMGGLPDLIFVIDTNKEEIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 I +VA++D+NSNPD + + +PGNDD++R+I+L+CDLV+ A IDGI++ S G D + Sbjct: 181 GIAVVAILDSNSNPDGIAFPVPGNDDAARAISLYCDLVSRAVIDGISQSQSASGVDVGAE 240 Query: 241 GETVVHSKEGMQL 253 E V + Sbjct: 241 AEPAVEIPAAAEA 253 >gi|262202041|ref|YP_003273249.1| 30S ribosomal protein S2 [Gordonia bronchialis DSM 43247] gi|262085388|gb|ACY21356.1| ribosomal protein S2 [Gordonia bronchialis DSM 43247] Length = 272 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 116/270 (42%), Positives = 174/270 (64%), Gaps = 4/270 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELETM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAVWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA- 240 IP++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + D+K Sbjct: 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTRVVASAVAEGVQARAGQASDDSKPEA 240 Query: 241 --GETVVHSKEGMQLEEDSQSSESSVLDGQ 268 GE + ++ + + + + ++ Sbjct: 241 GGGEPLAEWEQELLTQAAAPAGDAGTESTP 270 >gi|148255870|ref|YP_001240455.1| 30S ribosomal protein S2 [Bradyrhizobium sp. BTAi1] gi|166225243|sp|A5EK55|RS2_BRASB RecName: Full=30S ribosomal protein S2 gi|146408043|gb|ABQ36549.1| SSU ribosomal protein S2P [Bradyrhizobium sp. BTAi1] Length = 330 Score = 341 bits (875), Expect = 6e-92, Method: Composition-based stats. Identities = 155/266 (58%), Positives = 204/266 (76%), Gaps = 10/266 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L ALQ +S Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHTALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKR AQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDNVADAAKRCAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L + E +TKKERL ++R+RDKL R+L GI+DMGGLPD++FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGEANSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDMIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + YV+PGNDD+ R+I+L+CDL+A AAIDGI+R +G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYVVPGNDDAGRAISLYCDLIARAAIDGISRAQGELGIDIGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVL 265 + LEE+ ++ ++ Sbjct: 241 SA---------APLEEELPAATAAST 257 >gi|27379972|ref|NP_771501.1| 30S ribosomal protein S2 [Bradyrhizobium japonicum USDA 110] gi|81736819|sp|Q89KP3|RS2_BRAJA RecName: Full=30S ribosomal protein S2 gi|27353125|dbj|BAC50126.1| 30S ribosomal protein S2 [Bradyrhizobium japonicum USDA 110] Length = 331 Score = 341 bits (874), Expect = 8e-92, Method: Composition-based stats. Identities = 152/248 (61%), Positives = 195/248 (78%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH++ WNPKM +IF RNN HI+DL+QTVPML ALQ +S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQSHRWNPKMAPFIFGTRNNIHIVDLAQTVPMLHHALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKR AQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRCAQYFVNSRWLGGTLTNWKTISASIKRLRHLD 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++L E +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLAGGEANSYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+P + YV+PGNDD+ R+I+L+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNSDPKGITYVVPGNDDAGRAISLYCDLIARAAIDGISRAQGDSGIDIGA 240 Query: 240 AGETVVHS 247 + + Sbjct: 241 SARPLAEE 248 >gi|240170590|ref|ZP_04749249.1| 30S ribosomal protein S2 [Mycobacterium kansasii ATCC 12478] Length = 281 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 119/273 (43%), Positives = 173/273 (63%), Gaps = 1/273 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMSKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGLGRGDGKPEA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 ET E Q + ++ + G A P Sbjct: 241 ETAEPLAEWEQELLAAATTPVTAGAGDPTAETP 273 >gi|296139383|ref|YP_003646626.1| ribosomal protein S2 [Tsukamurella paurometabola DSM 20162] gi|296027517|gb|ADG78287.1| ribosomal protein S2 [Tsukamurella paurometabola DSM 20162] Length = 282 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 118/279 (42%), Positives = 178/279 (63%), Gaps = 5/279 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + + Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R VN +WLGGM+TN++TV + +Q++++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRMKELETM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-- 239 IP++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + G D K Sbjct: 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGVAGGDAKPEA 240 Query: 240 -AGETVVHSK-EGMQLEEDSQSSESSVLDGQEVAVVPEL 276 AGE + + E ++ + + + + + E Sbjct: 241 GAGEPLAEWEQELLESATVATAGDEAKATEAPASAPTET 279 >gi|75676050|ref|YP_318471.1| 30S ribosomal protein S2 [Nitrobacter winogradskyi Nb-255] gi|123773231|sp|Q3SRH2|RS2_NITWN RecName: Full=30S ribosomal protein S2 gi|74420920|gb|ABA05119.1| SSU ribosomal protein S2P [Nitrobacter winogradskyi Nb-255] Length = 332 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 155/257 (60%), Positives = 198/257 (77%), Gaps = 1/257 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L ALQ +S Sbjct: 1 MAIPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLLHHALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVARGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDLMFV+DTN+E +AIQEA+R Sbjct: 121 EVLNSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLMFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYIVPGNDDAGRAISLYCDLIARAAIDGISRAQGESGIDVGA 240 Query: 240 AGETVVHSKEGMQLEED 256 + + V Sbjct: 241 SVQPVQEEIPAAAQPAG 257 >gi|118580460|ref|YP_901710.1| 30S ribosomal protein S2 [Pelobacter propionicus DSM 2379] gi|166225292|sp|A1AQN2|RS2_PELPD RecName: Full=30S ribosomal protein S2 gi|118503170|gb|ABK99652.1| SSU ribosomal protein S2P [Pelobacter propionicus DSM 2379] Length = 257 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 109/253 (43%), Positives = 166/253 (65%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A + ++ Sbjct: 1 MSSISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKES 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA D V E A+R + VN +WLGGM+TN+ TV QSI +L+ ++ + Sbjct: 61 VLNGDTVLFVGTKKQAQDSVCEEAQRCGMHYVNQRWLGGMLTNFTTVKQSIDRLKRIDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + KKE L E++R KL++ L GI+ M LP LMFV+D E++AIQEA++L Sbjct: 121 FEDGTIEAYPKKEALQFEKERVKLQKILGGIKGMNRLPGLMFVIDPKNEEIAIQEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +PD +DYVIPGNDD+ R+I L +A A I+G +++ + A+ + A Sbjct: 181 IPVVAIVDTNCDPDPIDYVIPGNDDAIRAIRLLSSKMADAVIEGAQARNAALQAEKEGAA 240 Query: 242 ETVVHSKEGMQLE 254 + ++ ++ E Sbjct: 241 DAETAGEQVVEEE 253 >gi|92117241|ref|YP_576970.1| 30S ribosomal protein S2 [Nitrobacter hamburgensis X14] gi|123265289|sp|Q1QMN7|RS2_NITHX RecName: Full=30S ribosomal protein S2 gi|91800135|gb|ABE62510.1| SSU ribosomal protein S2P [Nitrobacter hamburgensis X14] Length = 332 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 152/257 (59%), Positives = 199/257 (77%), Gaps = 1/257 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L +ALQ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQSHRWNPKMADYIFGARNNIHIIDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EVLSSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A AAIDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYLVPGNDDAGRAISLYCDLIARAAIDGISRAQGDSGIDIGA 240 Query: 240 AGETVVHSKEGMQLEED 256 + + V Sbjct: 241 SVQPVQEELPAAAQPAG 257 >gi|90423936|ref|YP_532306.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris BisB18] gi|123089656|sp|Q215E9|RS2_RHOPB RecName: Full=30S ribosomal protein S2 gi|90105950|gb|ABD87987.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris BisB18] Length = 334 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 152/248 (61%), Positives = 196/248 (79%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP+L +ALQ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLLHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V EAAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDGVAEAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 EVLNSGDANAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I L+CDL+A A IDGI+R G D + Sbjct: 181 LNIPVAAIVDTNCDPKGITYLVPGNDDAGRAITLYCDLIARAVIDGISRAQGDSGFDIGA 240 Query: 240 AGETVVHS 247 + V Sbjct: 241 SVAPVREE 248 >gi|118469915|ref|YP_886856.1| 30S ribosomal protein S2 [Mycobacterium smegmatis str. MC2 155] gi|118171202|gb|ABK72098.1| ribosomal protein S2 [Mycobacterium smegmatis str. MC2 155] Length = 291 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 113/250 (45%), Positives = 169/250 (67%), Gaps = 1/250 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 +A+ T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + Sbjct: 13 LAMAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVK 72 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 73 ETVAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE 132 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+ Sbjct: 133 AMEQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEARK 192 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A++DTN +PD+VDY IPGNDD+ RS AL ++ASA +G+ + + + Sbjct: 193 LGIPVIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGQGSGEKPA 252 Query: 240 AGETVVHSKE 249 G + E Sbjct: 253 EGAEPLAEWE 262 >gi|331698490|ref|YP_004334729.1| 30S ribosomal protein S2 [Pseudonocardia dioxanivorans CB1190] gi|326953179|gb|AEA26876.1| ribosomal protein S2 [Pseudonocardia dioxanivorans CB1190] Length = 300 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 117/256 (45%), Positives = 173/256 (67%), Gaps = 2/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYEFVRET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L++LE + Sbjct: 61 VAHGGTIMFVGTKKQAQEAIAEEAGRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKDKLEKTLGGIRDMSKVPSAVWVVDTKKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V+++DTN +PD VD+ IPGNDD+ RS AL ++A AA DG+ + + G + G Sbjct: 181 IPVVSILDTNCDPDEVDFPIPGNDDAIRSAALLTKVIARAAADGLMARSARSGGRDGAEG 240 Query: 242 ETVVHSKEGM-QLEED 256 + V S E + + E+D Sbjct: 241 KPEVGSDEPLPEWEQD 256 >gi|83311597|ref|YP_421861.1| 30S ribosomal protein S2 [Magnetospirillum magneticum AMB-1] gi|123767989|sp|Q2W4C3|RS2_MAGMM RecName: Full=30S ribosomal protein S2 gi|82946438|dbj|BAE51302.1| Ribosomal protein S2 [Magnetospirillum magneticum AMB-1] Length = 266 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 137/247 (55%), Positives = 182/247 (73%), Gaps = 1/247 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQL+E+GV FGH WNPKM Y+F RN HIIDL Q+VPML +A+Q + Sbjct: 1 MALPTFTMRQLVEAGVHFGHNTRRWNPKMASYLFGIRNGIHIIDLQQSVPMLHRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A GGR+LFV TK QASD V E+AKR QY VN +WLGGM+TNWKT+S SI++LR+L+ Sbjct: 61 DVTAGGGRVLFVGTKHQASDVVAESAKRCGQYFVNHRWLGGMLTNWKTISNSIRRLRELD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L G TKKE+L + R+++KL RAL GI+DMGGLPD++F++DTN+E LA+QEA + Sbjct: 121 EQLASGALAGLTKKEQLVLSREKEKLDRALGGIKDMGGLPDILFIIDTNKEALAVQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++D+N +P + Y IPGNDD+ R+I +CDL++ A +DGI + + G D + Sbjct: 181 LGIPVVAIIDSNCDPAGITYPIPGNDDAIRAIQTYCDLMSGAVLDGIQAEITRGGGDVGA 240 Query: 240 AGETVVH 246 A E V Sbjct: 241 AAEAPVE 247 >gi|58038564|ref|YP_190528.1| 30S ribosomal protein S2 [Gluconobacter oxydans 621H] gi|81672763|sp|Q5FUV7|RS2_GLUOX RecName: Full=30S ribosomal protein S2 gi|58000978|gb|AAW59872.1| SSU ribosomal protein S2P [Gluconobacter oxydans 621H] Length = 265 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 142/244 (58%), Positives = 187/244 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP M Y+F RN HIIDL QTVPML +AL+V+ Sbjct: 1 MAMPDFTMRQLLEAGVHFGHHTRRWNPAMAPYLFGVRNQVHIIDLQQTVPMLDRALKVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D V EAA+R QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DTVANGGRVLFVGTKRAAADHVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L+ + G TKKE L+I R R+KL+R+L GI++MGGLPDL+FV+DTN+EKLAI+EA +L Sbjct: 121 EMLSGDTAGLTKKEVLDITRDREKLERSLGGIKEMGGLPDLLFVIDTNKEKLAIEEATKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++ V+D+NSNP V Y IPGNDD+ R+I L+CDLV+ A +DGI+ + + G D +A Sbjct: 181 GIPVIGVLDSNSNPAGVTYPIPGNDDAIRAITLYCDLVSGAVLDGISAELAASGQDIGAA 240 Query: 241 GETV 244 E Sbjct: 241 EELP 244 >gi|304320075|ref|YP_003853718.1| 30S ribosomal protein S2 [Parvularcula bermudensis HTCC2503] gi|303298978|gb|ADM08577.1| 30S ribosomal protein S2 [Parvularcula bermudensis HTCC2503] Length = 306 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 149/263 (56%), Positives = 196/263 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M YIF +R+ HIIDLSQTVP+L +AL + Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTHRWNPRMREYIFGDRSGIHIIDLSQTVPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA GGR+LFV TK QA V EAA R AQY +N++WLGG +TNW+TVS SIQ++R +E Sbjct: 61 DIVAGGGRVLFVGTKRQAQQPVAEAAGRCAQYYMNNRWLGGTLTNWETVSNSIQRMRVIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L E +GFTKKE+LN+ R+RDKL+ +L GIR+MGGLPDLMFV+D N+E +AI+EA++L Sbjct: 121 ESLEAEARGFTKKEQLNMTRERDKLELSLGGIREMGGLPDLMFVIDVNKEDIAIKEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +P+ VDY+IPGNDD+SR+I+L+C+LVA A IDG++ G D Sbjct: 181 GIPVVAVVDTNCSPEGVDYIIPGNDDASRAISLYCNLVADAVIDGLSASALEFGEDLGEL 240 Query: 241 GETVVHSKEGMQLEEDSQSSESS 263 E + D ++E+S Sbjct: 241 EELPDETALAEAEVMDPAATEAS 263 >gi|114569930|ref|YP_756610.1| 30S ribosomal protein S2 [Maricaulis maris MCS10] gi|122316103|sp|Q0APW5|RS2_MARMM RecName: Full=30S ribosomal protein S2 gi|114340392|gb|ABI65672.1| SSU ribosomal protein S2P [Maricaulis maris MCS10] Length = 288 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 143/249 (57%), Positives = 189/249 (75%), Gaps = 3/249 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+G FGH+ WNPKM+ +IF ER+N HIIDLSQTVP+L +AL + Sbjct: 1 MALPDFSMRQLLEAGCHFGHQTHRWNPKMKDFIFGERSNIHIIDLSQTVPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +T A+GGR+LFV TK QA D + +AA R AQY +N +WLGG +TNW+T+S SI +LR+LE Sbjct: 61 ETAAKGGRVLFVGTKRQAQDPLAQAAGRCAQYYMNQRWLGGTLTNWRTISNSIARLRELE 120 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + E G TKKE+L + R+R+KL R+L GI+DMGG PDLMFV+DTN+E +AIQEA+ Sbjct: 121 GMFENEGGMAGLTKKEQLMLTREREKLDRSLGGIKDMGGTPDLMFVIDTNKEGIAIQEAK 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IP++AVVDTN +PDLVD+ IPGNDD+SR+I+L+CDL+A A +DG+ MG D Sbjct: 181 KLGIPVIAVVDTNCDPDLVDFPIPGNDDASRAISLYCDLIADAVLDGMGDSQLAMGMDLG 240 Query: 239 SAGETVVHS 247 A E V + Sbjct: 241 EA-EAPVET 248 >gi|240138663|ref|YP_002963135.1| 30S ribosomal protein S2 [Methylobacterium extorquens AM1] gi|254561260|ref|YP_003068355.1| 30S ribosomal protein S2 [Methylobacterium extorquens DM4] gi|240008632|gb|ACS39858.1| 30S ribosomal protein S2 [Methylobacterium extorquens AM1] gi|254268538|emb|CAX24495.1| 30S ribosomal protein S2 [Methylobacterium extorquens DM4] Length = 349 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 154/270 (57%), Positives = 201/270 (74%), Gaps = 3/270 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+G FGH++ WNPKM+ YIF RNN HIIDL+QTVP L ALQ +SDTVARGG Sbjct: 1 MRQLLEAGAHFGHQSHRWNPKMQPYIFGTRNNIHIIDLAQTVPALHAALQAVSDTVARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SIQ+LR ++E L Sbjct: 61 RVLFVGTKRQAADSIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSIQRLRKVDETLEGGA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 G TKKERL + R++DKL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL IP+ A+ Sbjct: 121 VGLTKKERLMLTREKDKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAQRLGIPVAAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAI+GI R +G D ++ E Sbjct: 181 VDTNCNPDGISYIVPANDDAGRAIALYCDLIARAAIEGIGRGQGALGLDVGASEEPTAE- 239 Query: 248 KEGMQLEED-SQSSESSVLDGQEVAVVPEL 276 E +D + S S + +VA + E Sbjct: 240 -ELPPANDDVAVSVASDAIAPADVAALAES 268 >gi|114768793|ref|ZP_01446419.1| 30S ribosomal protein S2 [alpha proteobacterium HTCC2255] gi|114549710|gb|EAU52591.1| 30S ribosomal protein S2 [alpha proteobacterium HTCC2255] Length = 344 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 138/278 (49%), Positives = 194/278 (69%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M++YI+ RN HI+DL+QTVP+L +AL V+ Sbjct: 1 MALPEFSLRQLLEAGVHFGHQTHRWNPRMDQYIYGSRNGIHIMDLTQTVPLLDQALNVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TV++GGRILFV TK QAS V EAA+RSAQY +N +WLGG +TNW+TVS+SIQ+L+ + Sbjct: 61 ETVSKGGRILFVGTKRQASKAVAEAAERSAQYYMNHRWLGGTLTNWQTVSKSIQRLKAIS 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKERL +ER+ KL +L+GI +MGG PDL+FV+DTN+E LA+ EA +L Sbjct: 121 AQMETGFDGLTKKERLGMEREHAKLHASLNGIAEMGGTPDLLFVIDTNKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++ ++DTNS P+ +DY IPGNDD++R+I L+CDL+A +A+DG+A Q G D Sbjct: 181 GIPVIGILDTNSAPEGIDYPIPGNDDAARAIGLYCDLIARSALDGMAAQMGSAGVDLGEL 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + V + E+ G + + E S Sbjct: 241 VDAPVEEILDVVETSKEVEEETPESVGTKPTLFSEAPS 278 >gi|260433686|ref|ZP_05787657.1| ribosomal protein S2 [Silicibacter lacuscaerulensis ITI-1157] gi|260417514|gb|EEX10773.1| ribosomal protein S2 [Silicibacter lacuscaerulensis ITI-1157] Length = 259 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 148/259 (57%), Positives = 193/259 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M YI+ RN HIIDL+QTVPML +ALQVI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMAPYIYGARNGIHIIDLTQTVPMLDQALQVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QAS + EAA++SAQY +N +WLGG +TNWKTVSQSIQ+L ++ Sbjct: 61 DTVAKGGRVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLNQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EAMQSGAEGLTKKERLGMERDQAKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +PD VDYVIPGNDD++R+IAL+CDL A AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPDGVDYVIPGNDDAARAIALYCDLAARAALDGMSAQLGAAGVDLGAL 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E E +++ Sbjct: 241 EEAPAEEAVAETSEAPAEA 259 >gi|310815885|ref|YP_003963849.1| 30S ribosomal protein S2 [Ketogulonicigenium vulgare Y25] gi|308754620|gb|ADO42549.1| 30S ribosomal protein S2 [Ketogulonicigenium vulgare Y25] Length = 265 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 138/241 (57%), Positives = 190/241 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVP+L KALQV+ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTSRWNPRMGEFIYGSRNGIHILDLTQTVPLLDKALQVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA + +AA++SAQY +N +WLGG +TNW+T+SQ IQ L+ ++ Sbjct: 61 DTVARGGRVLFVGTKRQAQSAIADAAEKSAQYYINHRWLGGTLTNWQTISQRIQALKQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E ++ +G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E+LAI+EA +L Sbjct: 121 EYSDRGFEGMTKKERLGLEREQAKLQASLGGIREMGGVPDLLFVIDVNKEQLAIKEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +P+ VDYVIPGNDD++R+IAL+ DL+A AA+DG+ Q G D + Sbjct: 181 GIPVVAIVDTNCSPEGVDYVIPGNDDAARAIALYTDLIARAALDGMDAQLGAAGVDLGAM 240 Query: 241 G 241 Sbjct: 241 E 241 >gi|328543711|ref|YP_004303820.1| 30S ribosomal protein S2 [polymorphum gilvum SL003B-26A1] gi|326413455|gb|ADZ70518.1| 30S ribosomal protein S2 [Polymorphum gilvum SL003B-26A1] Length = 266 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 151/266 (56%), Positives = 202/266 (75%), Gaps = 4/266 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+GV FGH+ WNP+M YIF RN+ HIIDL+QTVP+L +AL+ +S Sbjct: 1 MALPDFTMRQLLEAGVHFGHQKHRWNPRMAPYIFGVRNDIHIIDLAQTVPLLHQALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+L V TK QA + V AA+ SAQY VN++WLGGM+TNWKT+S SIQ+LR LE Sbjct: 61 DTVAGGGRVLLVGTKRQAQESVAGAARNSAQYFVNARWLGGMLTNWKTISGSIQRLRKLE 120 Query: 121 ELLNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L+ + G TKKERL ++R+R+KL+R L GI+DMGGLPDL+FV+DTNRE +AIQEARR Sbjct: 121 ETLSTDAAGLLTKKERLFMDREREKLERNLGGIKDMGGLPDLIFVIDTNREAIAIQEARR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++D+N +PD + Y +PGNDD+ R+I L+CDL+A AAIDGI+R MG D + Sbjct: 181 LGIPVAAILDSNCDPDGITYPVPGNDDAGRAITLYCDLIARAAIDGISRAQGNMGMDIGA 240 Query: 240 AGETVVHS---KEGMQLEEDSQSSES 262 + V + EG ++ + ++++ Sbjct: 241 SEVAPVETVLADEGAEVASEETATDA 266 >gi|46202352|ref|ZP_00053343.2| COG0052: Ribosomal protein S2 [Magnetospirillum magnetotacticum MS-1] Length = 266 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 135/247 (54%), Positives = 182/247 (73%), Gaps = 1/247 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQL+E+GV FGH WNPKM Y+F RN HIIDL Q+VPML +A+Q + Sbjct: 1 MALPTFTMRQLVEAGVHFGHNTRRWNPKMASYLFGIRNGIHIIDLQQSVPMLHRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A GGR+LFV TK QAS+ V E+AKR QY VN +WLGGM+TNWKT+S SI++LR+L+ Sbjct: 61 DVTAGGGRVLFVGTKHQASEVVAESAKRCGQYFVNHRWLGGMLTNWKTISNSIRRLRELD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L G TKKE+L + R+++KL RAL GI+DMGGLPD++F++DTN+E LA+QEA + Sbjct: 121 EQLASGALAGLTKKEQLVLSREKEKLDRALGGIKDMGGLPDILFIIDTNKEALAVQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++D+N +P + Y IPGNDD+ R+I +CDL++ A +DGI + + G D + Sbjct: 181 LGIPVVAIIDSNCDPAGITYPIPGNDDAIRAIQTYCDLMSGAVLDGIQAEITRGGGDVGA 240 Query: 240 AGETVVH 246 + E V Sbjct: 241 SAEAPVE 247 >gi|332982471|ref|YP_004463912.1| 30S ribosomal protein S2P [Mahella australiensis 50-1 BON] gi|332700149|gb|AEE97090.1| SSU ribosomal protein S2P [Mahella australiensis 50-1 BON] Length = 277 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 117/279 (41%), Positives = 169/279 (60%), Gaps = 6/279 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L A + I + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKNLDVAYKFIKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA + + E AKR + VN +WLGGM+TN+KT+ Q +Q+L +LE + Sbjct: 61 AESGQDILFVGTKKQAQEAIEEEAKRCGMHYVNQRWLGGMLTNFKTIRQRVQRLTELENM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++KL++ L GI++M LP M+VVD +E +A+ EAR L Sbjct: 121 EQDGTFDMLPKKEVIKLRLEKEKLEKNLSGIKNMRSLPGAMYVVDPRKEHIAVSEARILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD VDYVIPGNDD+ R+I L L+A A ++ ARQ +G + S+ Sbjct: 181 IPIVAIVDTNCDPDEVDYVIPGNDDAIRAIKLISQLIADAVLE--ARQGEQLGDEETSSP 238 Query: 242 ETV---VHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E V E +++ + + + VPE + Sbjct: 239 EQPEQDVTDDYSADQPEKDVITKNEIDETDDFIDVPETL 277 >gi|86138886|ref|ZP_01057458.1| 30S ribosomal protein S2 [Roseobacter sp. MED193] gi|85824533|gb|EAQ44736.1| 30S ribosomal protein S2 [Roseobacter sp. MED193] Length = 251 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 144/248 (58%), Positives = 191/248 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M YI+ RN HI+DL+QTVPML ++LQ++ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMAPYIYGARNGIHIMDLTQTVPMLDQSLQIVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI++L ++ Sbjct: 61 DTVAKGGRILFVGTKRQAAGPIAEAAEKSAQYFMNHRWLGGTLTNWKTVSQSIKRLNEIN 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L +G TKKERL +ER + KL+ +L GI +MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EKLEGGAEGLTKKERLGMERDQQKLQASLGGIAEMGGVPDLLFVIDVKKEALAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +PD VD+VIPGNDD+SR+I+L+CDLVA AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPDGVDFVIPGNDDASRAISLYCDLVARAALDGMSAQLGAAGVDLGAL 240 Query: 241 GETVVHSK 248 E V Sbjct: 241 EEAPVEEA 248 >gi|254421050|ref|ZP_05034774.1| ribosomal protein S2 [Brevundimonas sp. BAL3] gi|196187227|gb|EDX82203.1| ribosomal protein S2 [Brevundimonas sp. BAL3] Length = 302 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 140/262 (53%), Positives = 195/262 (74%), Gaps = 2/262 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++R LLE+G FGH+ WNPKM+RYIF R+N HIIDLSQT+P+ +AL + Sbjct: 1 MALPEFSMRTLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTMPLFHQALVAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A+GGR+LFV TK QAS+ V EAAKR AQY +N++WLGG +TNW+TVS SI +LR+LE Sbjct: 61 DVAAKGGRVLFVGTKRQASEPVAEAAKRCAQYYMNNRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L +G KKE LN++R++DKL+ +L GI+DMG +PD+MFV+DTN+E +AIQEAR+L Sbjct: 121 GILENGGEGRVKKELLNLQREKDKLELSLGGIKDMGSIPDIMFVIDTNKEAIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A++DTNS+PD + Y +PGNDD++R+I +CDL+A A +DG+A S G D +A Sbjct: 181 NIPIIAILDTNSDPDGITYPVPGNDDAARAIQTYCDLIADAVLDGLAAGASASGVDLGAA 240 Query: 241 --GETVVHSKEGMQLEEDSQSS 260 E + + +E D+ + Sbjct: 241 INPEEPMLREASTPVEADAAPA 262 >gi|217977856|ref|YP_002362003.1| 30S ribosomal protein S2 [Methylocella silvestris BL2] gi|254764485|sp|B8EKA1|RS2_METSB RecName: Full=30S ribosomal protein S2 gi|217503232|gb|ACK50641.1| ribosomal protein S2 [Methylocella silvestris BL2] Length = 349 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 151/270 (55%), Positives = 200/270 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP FT+R LL++G FGH++ WNPKME +IF RNN HIIDL+QTVP+L +AL+ +S Sbjct: 1 MSLPDFTMRSLLDAGAHFGHQSHRWNPKMEPFIFGTRNNIHIIDLAQTVPLLHQALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA D + +AA RSAQY +NS+WLGGM+TNWKT+S SIQ+LR +E Sbjct: 61 DTVARGGRVLFVGTKRQAQDAIADAAHRSAQYYINSRWLGGMLTNWKTISASIQRLRKVE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L G TKKERL + R+RDKL++AL GI++MGG+PDL+FV+DTN+E+LAI+EA RL Sbjct: 121 ETLQGGGSGLTKKERLMMSRERDKLEKALGGIKEMGGIPDLIFVIDTNKEQLAIKEAERL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN NPD + + IPGNDD+ R+IAL+CDL+A AA+DGIAR G D A Sbjct: 181 HIPVAAILDTNCNPDGITFPIPGNDDAGRAIALYCDLIARAALDGIARGQGAGGVDFGEA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + L ++ ++V + E Sbjct: 241 DQPPAEDLPAADLPAETPEPTTAVTEAYEA 270 >gi|119386434|ref|YP_917489.1| 30S ribosomal protein S2 [Paracoccus denitrificans PD1222] gi|209573674|sp|A1B8E9|RS2_PARDP RecName: Full=30S ribosomal protein S2 gi|119377029|gb|ABL71793.1| SSU ribosomal protein S2P [Paracoccus denitrificans PD1222] Length = 261 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 146/247 (59%), Positives = 192/247 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNP+M +I+ ERN HI+DL+QTVPML ALQV+ Sbjct: 3 MALPEFSMRQLLEAGVHYGHQTQRWNPRMAEFIYGERNGIHIVDLTQTVPMLDAALQVVR 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA V +AA+RSAQ+ +N +WLGG +TNWKTVSQSIQ+L+ L+ Sbjct: 63 DTVAKGGRVLFVGTKRQAQKAVADAAERSAQFYMNHRWLGGTLTNWKTVSQSIQRLKALD 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L +G TKKERL +ER++ KL+ +L GIR+MGGLPDL+FV+D N+E LAI EA++L Sbjct: 123 ETLGSGAEGLTKKERLQMEREQAKLQASLGGIREMGGLPDLLFVIDVNKEDLAIAEAKKL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +P VDYVIPGNDD++R+IAL+CDLV+ AA+DG+ Q G D + Sbjct: 183 GIPVVAVVDTNCSPKGVDYVIPGNDDAARAIALYCDLVSRAALDGMTAQMGAAGVDLGAL 242 Query: 241 GETVVHS 247 +V Sbjct: 243 EASVEEE 249 >gi|254466088|ref|ZP_05079499.1| ribosomal protein S2 [Rhodobacterales bacterium Y4I] gi|206686996|gb|EDZ47478.1| ribosomal protein S2 [Rhodobacterales bacterium Y4I] Length = 257 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 143/238 (60%), Positives = 191/238 (80%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQV+ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHIMDLTQTVPMLDQALQVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ V EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAGPVAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER ++KL+ +L GIR+MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EKMAGGAEGLTKKERLGMERDQEKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP+VAVVDTN +PD VDY+IPGNDD+SR+I+L+CDLVA AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDASRAISLYCDLVARAALDGMSAQLGAAGVDLG 238 >gi|95928708|ref|ZP_01311454.1| ribosomal protein S2 [Desulfuromonas acetoxidans DSM 684] gi|95135053|gb|EAT16706.1| ribosomal protein S2 [Desulfuromonas acetoxidans DSM 684] Length = 256 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 113/256 (44%), Positives = 164/256 (64%), Gaps = 3/256 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A + Sbjct: 1 MAKVTMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQRTVRYFRSAYNFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA D + E A R+ QY VN +WLGGM+TN+ T+ SI +L+ +E + Sbjct: 61 VENGDSILFVGTKKQAQDSIREEADRAGQYYVNHRWLGGMLTNFATIKGSIDRLKKIETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L ++R+R KL++ L GI+ M LP MFV+D +E +A+ EA++L Sbjct: 121 SEDGTFELLTKKECLQLDRERIKLEKNLGGIKGMTKLPGAMFVIDPKKEAIAVCEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--S 239 IP+VAVVDTN +PD +DY+IPGNDD+ R+I LF +A A+I+G + + + ++ + + Sbjct: 181 IPVVAVVDTNCDPDEIDYIIPGNDDAIRAIRLFVSSMADASIEGAQAREAAICSENEGAA 240 Query: 240 AGETVVHSKEGMQLEE 255 A E EG E Sbjct: 241 AAEKTAEVVEGEAKEA 256 >gi|304391645|ref|ZP_07373587.1| 30S ribosomal protein S2 [Ahrensia sp. R2A130] gi|303295874|gb|EFL90232.1| 30S ribosomal protein S2 [Ahrensia sp. R2A130] Length = 378 Score = 338 bits (866), Expect = 7e-91, Method: Composition-based stats. Identities = 152/247 (61%), Positives = 202/247 (81%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HI+DLSQTVP++ +AL+ +S Sbjct: 1 MALPEFSMRQLLEAGVHFGHQAHRWNPKMDPYIFGKRNNIHILDLSQTVPLMHQALKQVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK AS+ V +AA+RSAQY VN++WLGGM+TNWKT+S SI++LR+LE Sbjct: 61 DTVARGGRVLFVGTKRTASEAVADAARRSAQYYVNARWLGGMLTNWKTISNSIKRLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL + +TKKE LN+ R+RDKL+RAL GI+DMGG PDL+FV+DTN+E +AIQEA++L Sbjct: 121 ELLTADQSSYTKKELLNLTRERDKLERALGGIKDMGGTPDLIFVIDTNKEAIAIQEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+ AV+D+NS+ D +D+ IPGNDD+SR++AL+CDL+A A IDGIARQ G D + Sbjct: 181 KIPVCAVLDSNSSTDNIDFPIPGNDDASRAVALYCDLIAKACIDGIARQQGSSGVDLGAQ 240 Query: 241 GETVVHS 247 E + Sbjct: 241 AEAPQET 247 >gi|260575091|ref|ZP_05843092.1| ribosomal protein S2 [Rhodobacter sp. SW2] gi|259022713|gb|EEW26008.1| ribosomal protein S2 [Rhodobacter sp. SW2] Length = 252 Score = 338 bits (866), Expect = 7e-91, Method: Composition-based stats. Identities = 139/248 (56%), Positives = 190/248 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV +GH+ WNPKM YI+ +RN HI+DL+QTVP+L +AL+V+ Sbjct: 1 MALPEFTMRQLLEAGVHYGHQTARWNPKMGEYIYGDRNGIHILDLTQTVPLLDQALKVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA+R AQ+ +N +WLGG +TNWKTVSQSI +L+ ++ Sbjct: 61 DTVAKGGRILFVGTKRQAQKPISEAAERCAQFYMNHRWLGGTLTNWKTVSQSINRLKQVD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EL+ G TKKERLNIER++ KL+ +L GIR+MGG+PDL+F++D +E LAI EA++L Sbjct: 121 ELMAHGADGLTKKERLNIEREQTKLQASLGGIREMGGVPDLIFIIDVGKEDLAILEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AVVDTN +P VDY+IPGNDD++R+IAL+CDL++ AA+DG+ Q G D + Sbjct: 181 GIPVIAVVDTNCSPKGVDYIIPGNDDAARAIALYCDLISRAALDGMTAQMGAAGIDLGAL 240 Query: 241 GETVVHSK 248 + Sbjct: 241 DQAPEEDA 248 >gi|167630324|ref|YP_001680823.1| 30S ribosomal protein s2 [Heliobacterium modesticaldum Ice1] gi|238687987|sp|B0THD7|RS2_HELMI RecName: Full=30S ribosomal protein S2 gi|167593064|gb|ABZ84812.1| 30S ribosomal protein s2 [Heliobacterium modesticaldum Ice1] Length = 232 Score = 337 bits (865), Expect = 8e-91, Method: Composition-based stats. Identities = 105/231 (45%), Positives = 153/231 (66%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVRKVDEAYNFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +ILFV TK QA D V E A+R Y VN +WLGGM+TN++T+ + I +LR+LE++ Sbjct: 61 ATQGKKILFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNFQTIQKRISRLRELEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++KL+R L GI+DM LP +FV+D +E++A+ EARRL Sbjct: 121 EADGTFEVLPKKEVSKLLHEKEKLERFLGGIKDMKELPGAIFVIDPRKERIAVAEARRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+V +VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Q Sbjct: 181 IPLVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADAVLEGNQGQSDA 231 >gi|15827838|ref|NP_302101.1| 30S ribosomal protein S2 [Mycobacterium leprae TN] gi|221230315|ref|YP_002503731.1| 30S ribosomal protein S2 [Mycobacterium leprae Br4923] gi|3122831|sp|O33038|RS2_MYCLE RecName: Full=30S ribosomal protein S2 gi|2251179|emb|CAB10657.1| 30s ribosomal protein s2 [Mycobacterium leprae] gi|13093390|emb|CAC30549.1| 30S ribosomal protein S2 [Mycobacterium leprae] gi|219933422|emb|CAR71693.1| 30S ribosomal protein S2 [Mycobacterium leprae Br4923] Length = 277 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 117/277 (42%), Positives = 173/277 (62%), Gaps = 1/277 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VARGGLVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P++A++DTN +PD VDY IPGNDD+ RS L ++ASA +G+ + D K Sbjct: 181 VPVIAILDTNCDPDEVDYPIPGNDDAIRSAELLTTVIASAVAEGLQVRAGLRCGDGKPET 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E V E Q S + G +++ + Sbjct: 241 EAVEPLPEWEQELLAGAGSSALNDSGADLSEANPTEA 277 >gi|317125399|ref|YP_004099511.1| 30S ribosomal protein S2P [Intrasporangium calvum DSM 43043] gi|315589487|gb|ADU48784.1| SSU ribosomal protein S2P [Intrasporangium calvum DSM 43043] Length = 342 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 116/276 (42%), Positives = 175/276 (63%), Gaps = 3/276 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLTYINNAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++T+S+ + +L++LEE Sbjct: 61 VAHGGTILFVGTKKQAQEPVAEQATRVGMPYVNHRWLGGMLTNFQTISKRLTRLKELEEL 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G+TKKE L ++R++DKL++ L GIR M +P +++VDT +E LA+ EAR+L Sbjct: 121 NFDDVAGSGYTKKELLILKREKDKLEKTLGGIRTMSKVPSAVWIVDTKKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +P++A++DTN +PD VDY IPGNDD+ RS+AL ++A A +G+ ++ + Sbjct: 181 GLPVIAILDTNCDPDEVDYKIPGNDDAIRSVALLTRVIADAVAEGLVQRSTGRSGVEAGV 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 E + + + E + + D E A PE+ Sbjct: 241 EEPLAEWERELYAEAAVTADGAVATDAAEPA-APEV 275 >gi|269955980|ref|YP_003325769.1| 30S ribosomal protein S2 [Xylanimonas cellulosilytica DSM 15894] gi|269304661|gb|ACZ30211.1| ribosomal protein S2 [Xylanimonas cellulosilytica DSM 15894] Length = 317 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 118/251 (47%), Positives = 168/251 (66%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + A + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLTYIDNAYNFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + V E A R VN +WLGGM+TN+ TV + +Q+L++LEE Sbjct: 61 VAHGGSVLFVGTKKQAQEPVAEQAARVGMPYVNHRWLGGMLTNFTTVHKRLQRLKELEEI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL R L GIRDM +P +++VDTN+E LA+ EAR+L Sbjct: 121 NFDDVAGSGLTKKELLVLRREKDKLSRTLGGIRDMAKVPSAVWIVDTNKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD+VDY IPGNDD+ RS+ L ++A A +G+ ++HS A T+ Sbjct: 181 NIPVVAILDTNCDPDMVDYAIPGNDDAIRSVTLLTRVIADAVAEGLLQRHSGKAAATEGE 240 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 241 SEPLAEWEREL 251 >gi|16126166|ref|NP_420730.1| 30S ribosomal protein S2 [Caulobacter crescentus CB15] gi|221234937|ref|YP_002517373.1| 30S ribosomal protein S2 [Caulobacter crescentus NA1000] gi|25009221|sp|Q9A703|RS2_CAUCR RecName: Full=30S ribosomal protein S2 gi|254764465|sp|B8GWS3|RS2_CAUCN RecName: Full=30S ribosomal protein S2 gi|13423378|gb|AAK23898.1| ribosomal protein S2 [Caulobacter crescentus CB15] gi|220964109|gb|ACL95465.1| SSU ribosomal protein S2P [Caulobacter crescentus NA1000] Length = 268 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 139/247 (56%), Positives = 188/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+G FGH+ WNPKM+RYIF R+N HIIDLSQ++P+L +AL + Sbjct: 1 MALPEFSMRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQSIPLLHQALVKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QASD V AAKR AQY VN +WLGG +TNW+TVS SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L E QG +KKE L + R+RDKL+ +L GI+DMGG+PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GVLAGEGQGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD + Y IPGNDD++R++ L+CDL+A A +DG+A + G D ++ Sbjct: 181 NIPVVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQAAAGVDLGAS 240 Query: 241 GETVVHS 247 V + Sbjct: 241 VAPVEPA 247 >gi|256750772|ref|ZP_05491657.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus CCSD1] gi|300914382|ref|ZP_07131698.1| ribosomal protein S2 [Thermoanaerobacter sp. X561] gi|256750355|gb|EEU63374.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus CCSD1] gi|300889317|gb|EFK84463.1| ribosomal protein S2 [Thermoanaerobacter sp. X561] Length = 261 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 152/235 (64%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + Sbjct: 27 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKL 86 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ Sbjct: 87 AMEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM 146 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L Sbjct: 147 EEDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLE 206 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G + + Sbjct: 207 IPIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQFAASEE 261 >gi|289645349|ref|ZP_06477336.1| ribosomal protein S2 [Frankia symbiont of Datisca glomerata] gi|289504841|gb|EFD25952.1| ribosomal protein S2 [Frankia symbiont of Datisca glomerata] Length = 305 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 122/271 (45%), Positives = 173/271 (63%), Gaps = 4/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ + +A + +T Sbjct: 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRFIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LF+ TK QA + + E A+R V +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 61 VAHGGTVLFIGTKKQAQEAIEEQAQRVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L Sbjct: 121 ELTGGTEVRTKKEQLVLSREKAKLERTLGGIRDMTRVPSAVWVVDTKKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ RS L +VA A DG+ AR AD K Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSATLLTRVVADAVADGLVARAGGTTSADVKP- 239 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 ET + + E++ + S D A Sbjct: 240 -ETPSGGEPLTEWEQELLRGQVSSADAPATA 269 >gi|209573699|sp|A0QVB8|RS2_MYCS2 RecName: Full=30S ribosomal protein S2 Length = 277 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 112/248 (45%), Positives = 167/248 (67%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAVWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD+VDY IPGNDD+ RS AL ++ASA +G+ + + + G Sbjct: 181 IPVIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGQGSGEKPAEG 240 Query: 242 ETVVHSKE 249 + E Sbjct: 241 AEPLAEWE 248 >gi|229820993|ref|YP_002882519.1| ribosomal protein S2 [Beutenbergia cavernae DSM 12333] gi|259494990|sp|C5BWU1|RS2_BEUC1 RecName: Full=30S ribosomal protein S2 gi|229566906|gb|ACQ80757.1| ribosomal protein S2 [Beutenbergia cavernae DSM 12333] Length = 353 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 122/268 (45%), Positives = 176/268 (65%), Gaps = 4/268 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + DT Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLTDIDRAFSFVKDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ + +L++LEE Sbjct: 61 VAHGGSILFVGTKKQAQEAVAEQASRVGMPYVNQRWLGGMLTNFQTVSKRLSRLKELEEI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL+R L GIR+M +P +++VDT +E LA+ EAR+L Sbjct: 121 DFDDVAASGRTKKELLMMRREKDKLERTLGGIREMAKVPSAVWIVDTKKEHLAVAEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-ADTKS 239 IP+VA++DTN +PD VDY IPGNDD+ R++ L ++A A +G +H + + Sbjct: 181 NIPVVAILDTNCDPDEVDYPIPGNDDAIRAVGLLTRVIADAVAEGTVARHGGSAPGEAGT 240 Query: 240 AGETVVH-SKEGMQLEEDSQSSESSVLD 266 A E + +E +Q + D QSS ++ + Sbjct: 241 AEEPLAEWERELLQGDTDEQSSAANTEE 268 >gi|163736431|ref|ZP_02143850.1| ribosomal protein S2 [Phaeobacter gallaeciensis BS107] gi|163741034|ref|ZP_02148426.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis 2.10] gi|161385387|gb|EDQ09764.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis 2.10] gi|161390301|gb|EDQ14651.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis BS107] Length = 257 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 138/244 (56%), Positives = 188/244 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL + Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMSPFIYGSRNGIHILDLTQTVPMLDAALNAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + +AA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAQPIADAAEKSAQYFMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIRDMGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EKMASGAEGLTKKERLGMERDQLKLEASLGGIRDMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +PD VDY+IPGNDD++R+IAL+CDLVA AA+DG++ Q G D + Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAIALYCDLVARAALDGMSAQLGAAGVDLGAL 240 Query: 241 GETV 244 + Sbjct: 241 EDAP 244 >gi|311110894|ref|ZP_07712291.1| ribosomal protein S2 [Lactobacillus gasseri MV-22] gi|209573705|sp|Q044D0|RS2_LACGA RecName: Full=30S ribosomal protein S2 gi|311066048|gb|EFQ46388.1| ribosomal protein S2 [Lactobacillus gasseri MV-22] Length = 261 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 158/260 (60%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + Sbjct: 1 MTVVTMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIRMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ Sbjct: 61 AQDGGVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L Sbjct: 121 SEDGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A Sbjct: 181 IPVVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMAD 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 + + + +EE + SE Sbjct: 241 KAAAENDDEESIEEVVEKSE 260 >gi|254819056|ref|ZP_05224057.1| 30S ribosomal protein S2 [Mycobacterium intracellulare ATCC 13950] Length = 278 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDQAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLDRSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEA 240 Query: 242 ETVVHSKEGMQ 252 E E Q Sbjct: 241 EAAEPLPEWEQ 251 >gi|320116052|ref|YP_004186211.1| 30S ribosomal protein S2 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319929143|gb|ADV79828.1| ribosomal protein S2 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 261 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 152/235 (64%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + Sbjct: 27 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKL 86 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ Sbjct: 87 AMEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM 146 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L Sbjct: 147 EEDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVAEARSLE 206 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G + + Sbjct: 207 IPIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQFAASEE 261 >gi|116629458|ref|YP_814630.1| 30S ribosomal protein S2 [Lactobacillus gasseri ATCC 33323] gi|116095040|gb|ABJ60192.1| SSU ribosomal protein S2P [Lactobacillus gasseri ATCC 33323] Length = 271 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 158/260 (60%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + Sbjct: 11 MTVVTMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIRMLDDAYNYVKAV 70 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ Sbjct: 71 AQDGGVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM 130 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L Sbjct: 131 SEDGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILG 190 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A Sbjct: 191 IPVVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMAD 250 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 + + + +EE + SE Sbjct: 251 KAAAENDDEESIEEVVEKSE 270 >gi|149914865|ref|ZP_01903394.1| ribosomal protein S2 [Roseobacter sp. AzwK-3b] gi|149811053|gb|EDM70890.1| ribosomal protein S2 [Roseobacter sp. AzwK-3b] Length = 267 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 138/239 (57%), Positives = 181/239 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HIIDL+QTVPML AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIIDLTQTVPMLDAALNAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V++GGRILFV TK QA+ V +AA R AQY +N +WLGG +TNW+TVSQSI++L +++ Sbjct: 61 DVVSKGGRILFVGTKRQAAQPVADAADRCAQYYMNHRWLGGTLTNWQTVSQSIKRLNEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L G TKKERL IER + KL+ +L GIR+MGGLPD++FV+D +E LA+ EA +L Sbjct: 121 EILGAGAGGLTKKERLGIERDQQKLQASLGGIREMGGLPDMLFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA+VDTN +PD VDY+IPGNDD++R+I+L+CDLV+ A+DG A Q G D Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVSRTALDGTAVQLGAAGVDLGG 239 >gi|218288324|ref|ZP_03492623.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius LAA1] gi|258511400|ref|YP_003184834.1| 30S ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218241683|gb|EED08856.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius LAA1] gi|257478126|gb|ACV58445.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 233 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 101/233 (43%), Positives = 156/233 (66%), Gaps = 1/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A + D Sbjct: 1 MAIISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVEEAYNFVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++L++LE++ Sbjct: 61 AASGGTVLFVGTKKQAQEAVKEEAERCGMFYVNQRWLGGTLTNFNTIQKRIRRLQELEQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++R++L++ L GI+ M LPD +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVILLRKERERLEKFLGGIKGMKKLPDALFIIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKIADAVLEGTQGGEETTA 233 >gi|126731215|ref|ZP_01747022.1| 30S ribosomal protein S2 [Sagittula stellata E-37] gi|126708126|gb|EBA07185.1| 30S ribosomal protein S2 [Sagittula stellata E-37] Length = 255 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 135/247 (54%), Positives = 186/247 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVP+L +ALQ I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIMDLTQTVPLLDQALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA+ GR+LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +LR ++ Sbjct: 61 DCVAKNGRVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLRSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERLN+ER + KL+ +L GIR+MGG+PD++FV+D +E LA+ EA +L Sbjct: 121 EQMENGAEGLTKKERLNMERDQQKLQASLGGIREMGGVPDMLFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +PD +DY+IPGNDD++R+IAL+CDLV+ AA+DG+ Q G D + Sbjct: 181 GIPVVAIVDTNCSPDGIDYIIPGNDDAARAIALYCDLVSRAALDGMTGQMEAAGVDLGAL 240 Query: 241 GETVVHS 247 E Sbjct: 241 EEAPAEE 247 >gi|56696849|ref|YP_167211.1| 30S ribosomal protein S2 [Ruegeria pomeroyi DSS-3] gi|61215365|sp|Q5LRZ4|RS2_SILPO RecName: Full=30S ribosomal protein S2 gi|56678586|gb|AAV95252.1| ribosomal protein S2 [Ruegeria pomeroyi DSS-3] Length = 257 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 140/238 (58%), Positives = 186/238 (78%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL+ + Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHILDLTQTVPMLDQALKAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QAS + EAA++SAQY +N +WLGG +TNWKTVSQSIQ+LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLRMID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EKMEGGAEGLTKKERLGMERDQAKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP+VAVVDTN +PD VDY+IPGNDD++R+I+L+CDL A AA+DG+ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMTAQLGAAGVDLG 238 >gi|83592921|ref|YP_426673.1| 30S ribosomal protein S2 [Rhodospirillum rubrum ATCC 11170] gi|123767063|sp|Q2RU09|RS2_RHORT RecName: Full=30S ribosomal protein S2 gi|29028250|gb|AAO62351.1| putative ribosomal protein S2 [Rhodospirillum rubrum] gi|83575835|gb|ABC22386.1| SSU ribosomal protein S2P [Rhodospirillum rubrum ATCC 11170] Length = 262 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 133/248 (53%), Positives = 179/248 (72%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQL+E+G FGH WNPKM Y++ +R+N HIIDL QTVPML +A+Q + Sbjct: 1 MALPTFSMRQLIEAGCHFGHNTRRWNPKMAPYLYGQRDNVHIIDLQQTVPMLYRAMQAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A GGR+LFV TK QA D V E A+R QY VN +WLGGM+TNWKT+S SI++LRDLE Sbjct: 61 DVTAGGGRVLFVGTKRQAQDVVAEHARRCGQYYVNHRWLGGMLTNWKTISHSIKRLRDLE 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + G TKKE+LN+ R++DKL AL GI++MGGLPD++F++DT +E LA+ EA + Sbjct: 121 ERFGGGDLLGLTKKEQLNLGREKDKLDMALGGIKEMGGLPDMLFIIDTVKESLAVNEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L +P+VAV+D+NS+P + Y IPGNDD+ R+I +C+L++ AAIDGI Q G D + Sbjct: 181 LGLPVVAVIDSNSDPRGITYPIPGNDDAIRAIQTYCELISGAAIDGIQAQLGAAGVDVGA 240 Query: 240 AGETVVHS 247 A + Sbjct: 241 AEIVPAET 248 >gi|317508976|ref|ZP_07966609.1| ribosomal protein S2 [Segniliparus rugosus ATCC BAA-974] gi|316252741|gb|EFV12178.1| ribosomal protein S2 [Segniliparus rugosus ATCC BAA-974] Length = 279 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 116/253 (45%), Positives = 169/253 (66%), Gaps = 2/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTSIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + A R VN +WLGGM+TN++TV + +Q+L++LE + Sbjct: 61 VAHGGTILFVGTKKQAQEPIATEALRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 G TKKE L + R+ +KL R+L G+RDM LP ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFAGRTKKEILGLTREMNKLDRSLGGLRDMAKLPSALWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PDLVDY IP NDD+ RS AL +VA+A DG+ ++ S G+ A Sbjct: 181 IPVVAILDTNCDPDLVDYPIPANDDAIRSAALLTRVVATAVADGLQQRSSQRGSQGGEA- 239 Query: 242 ETVVHSKEGMQLE 254 E + ++ + + Sbjct: 240 EPLAEWEQELLAQ 252 >gi|289450066|ref|YP_003475252.1| 30S ribosomal protein S2 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184613|gb|ADC91038.1| ribosomal protein S2 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 262 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 107/274 (39%), Positives = 163/274 (59%), Gaps = 14/274 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL +TV ++A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKTVRKAEEAYNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG++LFV TK QA D + E A+R + +N++WLGG +TN+ T+ + I +L +L ++ Sbjct: 61 AANGGKVLFVGTKKQAQDSIKEEAERCGMFYINNRWLGGTLTNYTTIRKRIGRLFELHKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++ + +KL + L GI++M G+PD +FVVD +E +A+ EARRL Sbjct: 121 EEDGTFDLLPKKEVAKLKLEMEKLDKNLGGIKEMNGIPDCLFVVDPKKEHIAVMEARRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P+V +VDTN +P+ VDYVIPGNDD+ R++ L +A A I+G G Sbjct: 181 VPVVGIVDTNCDPEEVDYVIPGNDDAIRAVKLIAGKMADAVIEGKQ-------------G 227 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E VV E E+ ++S+ E V E Sbjct: 228 EDVVAETEQADSEQTPEASDEDAKPSIEEVVAAE 261 >gi|238852608|ref|ZP_04643018.1| ribosomal protein S2 [Lactobacillus gasseri 202-4] gi|282850826|ref|ZP_06260200.1| ribosomal protein S2 [Lactobacillus gasseri 224-1] gi|238834754|gb|EEQ26981.1| ribosomal protein S2 [Lactobacillus gasseri 202-4] gi|282557778|gb|EFB63366.1| ribosomal protein S2 [Lactobacillus gasseri 224-1] Length = 261 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 158/260 (60%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + Sbjct: 1 MTVVTMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ Sbjct: 61 AQDGGVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L Sbjct: 121 SEDGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A Sbjct: 181 IPVVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMAD 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 + + + +EE + SE Sbjct: 241 KAAAENDDEESIEEVVEKSE 260 >gi|296171502|ref|ZP_06852766.1| 30S ribosomal protein S2 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894064|gb|EFG73825.1| 30S ribosomal protein S2 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 277 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 115/251 (45%), Positives = 165/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEA 240 Query: 242 ETVVHSKEGMQ 252 E E Q Sbjct: 241 EAAEPLPEWEQ 251 >gi|159036874|ref|YP_001536127.1| ribosomal protein S2 [Salinispora arenicola CNS-205] gi|189045000|sp|A8M6B1|RS2_SALAI RecName: Full=30S ribosomal protein S2 gi|157915709|gb|ABV97136.1| ribosomal protein S2 [Salinispora arenicola CNS-205] Length = 279 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 134/280 (47%), Positives = 179/280 (63%), Gaps = 8/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYDFVRGT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L Sbjct: 61 VAEGGSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEAL 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+ G+TKKE L + R+++KL R L G+RDM LP ++VVDT +E +A+ EAR+L Sbjct: 121 GDLSGTAAGYTKKETLQLSREKEKLSRTLGGLRDMQKLPAAIWVVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP++AV+DTN +PD VDY IPGNDD+ RS L +VA+A DG IAR G D K Sbjct: 181 GIPVIAVLDTNCDPDEVDYPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRRRGTDEKP 240 Query: 240 ----AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 A + + E LEE +S E D Q A E Sbjct: 241 EAGVASDEPLAEWERELLEEPKKSDE-PKSDEQPAAAAAE 279 >gi|209545460|ref|YP_002277689.1| 30S ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] gi|221222512|sp|A9HRQ9|RS2_GLUDA RecName: Full=30S ribosomal protein S2 gi|209533137|gb|ACI53074.1| ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] Length = 260 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 139/247 (56%), Positives = 190/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML +AL+ I Sbjct: 1 MAMPDFTMRQLLEAGVHFGHHTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLDRALKAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D + EAAKRS QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 61 DTVAGGGRVLFVGTKRAAADQIAEAAKRSGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L + G TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L Sbjct: 121 DMLTGDTHGLTKKEILDITRNREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+NS+P V + IPGNDD+ R+IAL+C+LV+ A +DGI+ + G D +A Sbjct: 181 GIPVVAILDSNSDPRGVTFPIPGNDDAIRAIALYCELVSGAVLDGISAELGASGQDFGAA 240 Query: 241 GETVVHS 247 E V + Sbjct: 241 EELPVDT 247 >gi|183981832|ref|YP_001850123.1| 30S ribosomal protein S2 RpsB [Mycobacterium marinum M] gi|183175158|gb|ACC40268.1| 30S ribosomal protein S2 RpsB [Mycobacterium marinum M] Length = 276 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 115/251 (45%), Positives = 165/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDGKPVV 240 Query: 242 ETVVHSKEGMQ 252 E E Q Sbjct: 241 EAAEPLAEWEQ 251 >gi|296268978|ref|YP_003651610.1| 30S ribosomal protein S2 [Thermobispora bispora DSM 43833] gi|296091765|gb|ADG87717.1| ribosomal protein S2 [Thermobispora bispora DSM 43833] Length = 303 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 120/257 (46%), Positives = 172/257 (66%), Gaps = 7/257 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + + Sbjct: 1 MA-PVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLSYIDRAYEFVK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG ILF+ TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 60 ETVAHGGTILFIGTKKQAQEAIAEQASRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE 119 Query: 121 EL--LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E+ N G TKKE L R+++KL+R L GIRDM +P ++VVDT +E++A+ EAR Sbjct: 120 EMDFDNVAGSGLTKKELLMRRREKEKLERTLGGIRDMTRVPSAVWVVDTKKEQIAVNEAR 179 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A A DG+ + D K Sbjct: 180 KLGIPVVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVIADAVADGLMSRAGGARGDDK 239 Query: 239 ----SAGETVVHSKEGM 251 +AGE + + + Sbjct: 240 PSGVAAGEPLAEWEREL 256 >gi|296395047|ref|YP_003659931.1| 30S ribosomal protein S2 [Segniliparus rotundus DSM 44985] gi|296182194|gb|ADG99100.1| ribosomal protein S2 [Segniliparus rotundus DSM 44985] Length = 287 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 116/253 (45%), Positives = 168/253 (66%), Gaps = 2/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTAIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + A R VN +WLGGM+TN++TV + +Q+L++LE + Sbjct: 61 VAHGGTILFVGTKKQAQEPIATEAARVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 G TKKE L + R+ +KL R+L G+RDM LP ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFSGRTKKEILGLTREMNKLDRSLGGLRDMAKLPSALWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PDLVDY IP NDD+ RS AL +VA+A DG+ ++ S G A Sbjct: 181 IPVVAILDTNCDPDLVDYPIPANDDAIRSAALLTRVVATAVADGLQQRASQRGGKGGEA- 239 Query: 242 ETVVHSKEGMQLE 254 E + ++ + + Sbjct: 240 EPLAEWEQELLAQ 252 >gi|222054620|ref|YP_002536982.1| ribosomal protein S2 [Geobacter sp. FRC-32] gi|254764478|sp|B9M5C6|RS2_GEOSF RecName: Full=30S ribosomal protein S2 gi|221563909|gb|ACM19881.1| ribosomal protein S2 [Geobacter sp. FRC-32] Length = 255 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 111/255 (43%), Positives = 165/255 (64%), Gaps = 2/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + + Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKSAYNFVFEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R + VN +WLGGM+TN+ TV QSI++L+ ++ + Sbjct: 61 AQAGETMLFVGTKKQAQDSVAEEAQRCGMFFVNDRWLGGMLTNFSTVKQSIERLKRIDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +TKKE L +E++R KL++ L GI+ M LP L+FV+D E++A+ EA++L Sbjct: 121 FADGTIEAYTKKEALQMEKERVKLEKTLGGIKGMNKLPGLLFVIDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +PD +DYVIPGNDD+ R+I L VA A I+G +++ + DT+ A Sbjct: 181 IPVVAIVDTNCDPDNIDYVIPGNDDAIRAIRLLTSKVADAMIEGGQARNTQLQTDTEGAE 240 Query: 242 -ETVVHSKEGMQLEE 255 + EG E Sbjct: 241 FAAGEETGEGTVAEA 255 >gi|209573701|sp|A0PQ79|RS2_MYCUA RecName: Full=30S ribosomal protein S2 Length = 276 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 165/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G +KKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRSKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDGKPVV 240 Query: 242 ETVVHSKEGMQ 252 E E Q Sbjct: 241 EAAEPLAEWEQ 251 >gi|163746350|ref|ZP_02153708.1| 30S ribosomal protein S2 [Oceanibulbus indolifex HEL-45] gi|161380235|gb|EDQ04646.1| 30S ribosomal protein S2 [Oceanibulbus indolifex HEL-45] Length = 292 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 142/271 (52%), Positives = 194/271 (71%), Gaps = 4/271 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M YI+ RN HI+DL+QTVPML AL++I Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGPYIYGARNGIHIMDLTQTVPMLDDALKIIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GG +LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +L++++ Sbjct: 61 DTVAKGGSVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKNID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LAI EA +L Sbjct: 121 EQSERGFEGLTKKERLGMERDQYKLEASLGGIREMGGRPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +PD VDY+IPGNDD++R+I+L+CDL A AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMSAQLGAAGVDLGAM 240 Query: 241 GETVVHSK----EGMQLEEDSQSSESSVLDG 267 E E +E + S E+ D Sbjct: 241 EEAPEEEAVSEGESTGVEIGNASDETVHNDA 271 >gi|300361912|ref|ZP_07058089.1| 30S ribosomal protein S2 [Lactobacillus gasseri JV-V03] gi|300354531|gb|EFJ70402.1| 30S ribosomal protein S2 [Lactobacillus gasseri JV-V03] Length = 261 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 158/260 (60%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + Sbjct: 1 MTVVTMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ Sbjct: 61 AQDGGVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L Sbjct: 121 SEDGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A Sbjct: 181 IPVVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMAD 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 + + + +EE + SE Sbjct: 241 KAAAENGDEESIEEVVEKSE 260 >gi|54026102|ref|YP_120344.1| 30S ribosomal protein S2 [Nocardia farcinica IFM 10152] gi|61215421|sp|Q5YS61|RS2_NOCFA RecName: Full=30S ribosomal protein S2 gi|54017610|dbj|BAD58980.1| putative ribosomal protein S2 [Nocardia farcinica IFM 10152] Length = 285 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 116/257 (45%), Positives = 169/257 (65%), Gaps = 4/257 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+ +KL+R L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREMNKLERTLGGIRDMQKVPSAIWVVDTNKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-- 239 IP++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLASGDAKPEA 240 Query: 240 -AGETVVHSKEGMQLEE 255 AGE + ++ + + Sbjct: 241 GAGEPLAEWEQELLAQA 257 >gi|41409054|ref|NP_961890.1| 30S ribosomal protein S2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118464674|ref|YP_882916.1| 30S ribosomal protein S2 [Mycobacterium avium 104] gi|254776172|ref|ZP_05217688.1| 30S ribosomal protein S2 [Mycobacterium avium subsp. avium ATCC 25291] gi|61215644|sp|Q73VQ7|RS2_MYCPA RecName: Full=30S ribosomal protein S2 gi|41397413|gb|AAS05273.1| RpsB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165961|gb|ABK66858.1| ribosomal protein S2 [Mycobacterium avium 104] Length = 276 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 165/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMSKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGVGRGDGKPEV 240 Query: 242 ETVVHSKEGMQ 252 E E Q Sbjct: 241 EAAEPLAEWEQ 251 >gi|307264899|ref|ZP_07546461.1| ribosomal protein S2 [Thermoanaerobacter wiegelii Rt8.B1] gi|306920157|gb|EFN50369.1| ribosomal protein S2 [Thermoanaerobacter wiegelii Rt8.B1] Length = 261 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 152/235 (64%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + Sbjct: 27 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKL 86 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ Sbjct: 87 AMEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM 146 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L Sbjct: 147 EEDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLE 206 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G + + Sbjct: 207 IPIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQFAASEE 261 >gi|167040298|ref|YP_001663283.1| 30S ribosomal protein S2 [Thermoanaerobacter sp. X514] gi|307724382|ref|YP_003904133.1| 30S ribosomal protein S2 [Thermoanaerobacter sp. X513] gi|326389451|ref|ZP_08211018.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus JW 200] gi|238687581|sp|B0K1P9|RS2_THEPX RecName: Full=30S ribosomal protein S2 gi|166854538|gb|ABY92947.1| ribosomal protein S2 [Thermoanaerobacter sp. X514] gi|307581443|gb|ADN54842.1| ribosomal protein S2 [Thermoanaerobacter sp. X513] gi|325994456|gb|EGD52881.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus JW 200] Length = 235 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 152/235 (64%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ Sbjct: 61 AMEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L Sbjct: 121 EEDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLE 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQFAASEE 235 >gi|296116244|ref|ZP_06834861.1| 30S ribosomal protein S2 [Gluconacetobacter hansenii ATCC 23769] gi|295977178|gb|EFG83939.1| 30S ribosomal protein S2 [Gluconacetobacter hansenii ATCC 23769] Length = 265 Score = 335 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 141/246 (57%), Positives = 187/246 (76%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P+FT+RQLLESGV FGH WNP+M ++F RN HIIDL QTVPML +AL+ I DT Sbjct: 1 MPEFTMRQLLESGVHFGHHTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLDRALKAIRDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR+LFV TK A+D + EAAKR QY VN +WLGGM+TNWKT++ SI++LR ++E+ Sbjct: 61 VAGGGRVLFVGTKRAAADQIAEAAKRCGQYYVNHRWLGGMLTNWKTITGSIKRLRGIDEM 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L QG TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L I Sbjct: 121 LENGTQGLTKKEVLDITRDREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VAV+D+NS+P V Y IPGNDD+ R+IAL+C+LV+ A +DGI+ + G D +A E Sbjct: 181 PVVAVLDSNSDPRGVTYPIPGNDDAIRAIALYCELVSGAVLDGISAELGASGEDFGAAEE 240 Query: 243 TVVHSK 248 V Sbjct: 241 LPVDPA 246 >gi|289578402|ref|YP_003477029.1| ribosomal protein S2 [Thermoanaerobacter italicus Ab9] gi|297544678|ref|YP_003676980.1| 30S ribosomal protein S2 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528115|gb|ADD02467.1| ribosomal protein S2 [Thermoanaerobacter italicus Ab9] gi|296842453|gb|ADH60969.1| ribosomal protein S2 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 235 Score = 335 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 153/235 (65%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKGL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ Sbjct: 61 VMEGGTILFVGTKKQAQDSIREEAERCGMFYVNQRWLGGTLTNFKTIKGRIQRLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L Sbjct: 121 EEDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLE 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +PDL+DY IPGNDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAIVDTNCDPDLIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQFAAAEE 235 >gi|295425174|ref|ZP_06817877.1| 30S ribosomal protein S2 [Lactobacillus amylolyticus DSM 11664] gi|295064950|gb|EFG55855.1| 30S ribosomal protein S2 [Lactobacillus amylolyticus DSM 11664] Length = 258 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 151/257 (58%), Gaps = 1/257 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D + E A R QY VN +WLGG +TNW T+ +++L+ L+E+ Sbjct: 61 AQEGGVFLFVGTKKQAQDSIAEEATRCGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +KL+R L GI DM +PD++FVVD +EK+A+ EA L Sbjct: 121 SQDGTFDVLPKKEAALLTKEMNKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A ++G Q + Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIVGAMADAIVEGQQGQDDDKNSVEVGFK 240 Query: 242 ETVVHSKEGMQLEEDSQ 258 E + + EE + Sbjct: 241 EDADGKDKVVGAEEHKE 257 >gi|86742262|ref|YP_482662.1| 30S ribosomal protein S2 [Frankia sp. CcI3] gi|86569124|gb|ABD12933.1| SSU ribosomal protein S2P [Frankia sp. CcI3] Length = 289 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 123/269 (45%), Positives = 175/269 (65%), Gaps = 5/269 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +T Sbjct: 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 61 VAHGGTVLFIGTKKQAQEAIEEHAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L Sbjct: 121 EVTGGTEVRTKKEQLVLTREKVKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK-- 238 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA A DG +AR + AD K Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASSSADAKPE 240 Query: 239 -SAGETVVHSKEGMQLEEDSQSSESSVLD 266 SAGE + E L ++ + ++ Sbjct: 241 QSAGEEPLAEWEQALLRGEAPAEAPGAVE 269 >gi|167037637|ref|YP_001665215.1| 30S ribosomal protein S2 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|238687715|sp|B0K9R6|RS2_THEP3 RecName: Full=30S ribosomal protein S2 gi|166856471|gb|ABY94879.1| ribosomal protein S2 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 235 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 101/235 (42%), Positives = 152/235 (64%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ IQ+L++L+++ Sbjct: 61 AMEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L Sbjct: 121 EEDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVAEARSLE 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +P+L+DY IPGNDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQFAASEE 235 >gi|126737740|ref|ZP_01753470.1| 30S ribosomal protein S2 [Roseobacter sp. SK209-2-6] gi|126721133|gb|EBA17837.1| 30S ribosomal protein S2 [Roseobacter sp. SK209-2-6] Length = 255 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 143/239 (59%), Positives = 190/239 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M YI+ RN HI+DL+QTVPML +ALQ++ Sbjct: 1 MALPEFTLRQLLEAGVHFGHQTQRWNPRMSTYIYGARNGIHIMDLTQTVPMLDQALQIVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRILFVGTKRQAAGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EKMESGAEGLTKKERLGMERDQQKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VAVVDTN +PD VD+VIPGNDD+SR+I+L+CDLVA AA+DG+ Q G D + Sbjct: 181 GIPVVAVVDTNCSPDGVDFVIPGNDDASRAISLYCDLVARAALDGMTAQLGAAGVDLGA 239 >gi|110679879|ref|YP_682886.1| 30S ribosomal protein S2 [Roseobacter denitrificans OCh 114] gi|123361841|sp|Q165Z3|RS2_ROSDO RecName: Full=30S ribosomal protein S2 gi|109455995|gb|ABG32200.1| ribosomal protein S2 [Roseobacter denitrificans OCh 114] Length = 260 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 135/239 (56%), Positives = 182/239 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQ I Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GG ILFV TK QA + +AA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 DTVAKGGSILFVGTKRQAQQPIADAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LA+ EA +L Sbjct: 121 EQSERGFEGLTKKERLGMERDQGKLQASLGGIREMGGRPDLIFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VAVVDTN PD +DY+IPGNDD+SR+I+L+CDL A AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCAPDGIDYIIPGNDDASRAISLYCDLAARAALDGMSAQLGAAGVDLGA 239 >gi|114765356|ref|ZP_01444473.1| 30S ribosomal protein S2 [Pelagibaca bermudensis HTCC2601] gi|114542336|gb|EAU45365.1| 30S ribosomal protein S2 [Roseovarius sp. HTCC2601] Length = 255 Score = 334 bits (856), Expect = 9e-90, Method: Composition-based stats. Identities = 135/247 (54%), Positives = 189/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL VI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHILDLTQTVPMLDAALNVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+GGR+LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 ETVAKGGRVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER++ KL+ +L GIR+MGGLP+L+FV+D +E+LAI EA++L Sbjct: 121 EQMEAGAEGLTKKERLGMEREQAKLQASLGGIREMGGLPELLFVIDVKKEQLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +P+ VDY+IPGNDD++R+IAL+CDLV+ AA+DG+ Q G D + Sbjct: 181 GIPVVAIVDTNCSPEGVDYIIPGNDDAARAIALYCDLVSRAALDGMTGQMEAAGVDLGAL 240 Query: 241 GETVVHS 247 + Sbjct: 241 EDAPAEE 247 >gi|326382899|ref|ZP_08204589.1| 30S ribosomal protein S2 [Gordonia neofelifaecis NRRL B-59395] gi|326198489|gb|EGD55673.1| 30S ribosomal protein S2 [Gordonia neofelifaecis NRRL B-59395] Length = 272 Score = 334 bits (856), Expect = 9e-90, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 174/277 (62%), Gaps = 9/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q++++LE + Sbjct: 61 VAHGGTILFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFNTVHKRLQRMKELETM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R L GIRDM +P +++VDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGIRDMAKVPSAVWIVDTNKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-- 239 IP++A++DTN +PD+VDY IP NDD+ RS AL ++ASA +G+ + D K Sbjct: 181 IPVIAILDTNCDPDVVDYPIPANDDAIRSAALLTRVIASAVAEGVQARAGQTAGDAKPEA 240 Query: 240 -AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 GE + ++ + E + + DG A E Sbjct: 241 GEGEPLAEWEQELLAE-----ATAPATDGATEAPAAE 272 >gi|317121840|ref|YP_004101843.1| 30S ribosomal protein S2P [Thermaerobacter marianensis DSM 12885] gi|315591820|gb|ADU51116.1| SSU ribosomal protein S2P [Thermaerobacter marianensis DSM 12885] Length = 233 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +L +A + + Sbjct: 1 MPVVAMKQLLEAGVHFGHQTRRWNPKMRPYIFMERNGIYIIDLQKTVRLLDEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GGR+LFV TK QA + + E A R ++ +N +WLGG +TN+ T+ I +L +LE++ Sbjct: 61 VAQGGRVLFVGTKKQAREAIAEEATRCGEFYINERWLGGTLTNFSTIRTRIDRLAELEQM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+++KL++ L GI+ M LPD ++VVD +EK+A+ EAR+L Sbjct: 121 EAEGHFERLPKKEVARLVREKEKLEKYLGGIKGMKDLPDAVYVVDPRKEKIAVTEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN +P+ +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPVVAIVDTNCDPEEIDYVIPGNDDAIRAVRLITGKIADAVLEGKQ 226 >gi|326803587|ref|YP_004321405.1| ribosomal protein S2 [Aerococcus urinae ACS-120-V-Col10a] gi|326650183|gb|AEA00366.1| ribosomal protein S2 [Aerococcus urinae ACS-120-V-Col10a] Length = 261 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 114/261 (43%), Positives = 165/261 (63%), Gaps = 1/261 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL QTV +L KA V+ D Sbjct: 1 MSQVTMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQQTVKLLDKAYNVVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + E A R QY VN +WLGG++TNW T+ +SIQ++RD++ + Sbjct: 61 AANGGNILFVGTKKQAQQAIEEEALRCGQYYVNHRWLGGLLTNWDTIQKSIQRMRDIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+ L G+ DM LPD +FVVD +E++A+ EA++L Sbjct: 121 EEDGTFDVLPKKEVSELNKEREKLENNLGGMADMPSLPDAIFVVDPRKEEIAVNEAKKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A+VDTN +PD +DYVIP NDD+ R+I L +A A ++G + ++ + Sbjct: 181 IPIIAMVDTNCDPDDIDYVIPSNDDAIRAIRLIASTLADAVLEGNQGEDDEDASEELATD 240 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 E + E + ++ Sbjct: 241 EDLEKVAAQFASENEEAEAQE 261 >gi|302383609|ref|YP_003819432.1| ribosomal protein S2 [Brevundimonas subvibrioides ATCC 15264] gi|302194237|gb|ADL01809.1| ribosomal protein S2 [Brevundimonas subvibrioides ATCC 15264] Length = 298 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 143/278 (51%), Positives = 199/278 (71%), Gaps = 5/278 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++R LLE+G FGH+ WNPKMERYIF R+N HIIDLSQT+P+ +AL + Sbjct: 1 MALPDFSMRTLLEAGAHFGHQTHRWNPKMERYIFGSRSNIHIIDLSQTMPLFHQALVAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A+GGR+LFV TK QA++ V EAAKR AQY +N++WLGG +TNWKTVS SI +LR+LE Sbjct: 61 EVAAKGGRVLFVGTKRQAAEPVAEAAKRCAQYYMNNRWLGGTLTNWKTVSGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L + +G KKE +N+ R+++KL+ +L GIRDMG +PD+MFV+DTN+E +AI EAR+L Sbjct: 121 GILERGGEGRVKKELVNLSREKEKLELSLGGIRDMGSIPDIMFVIDTNKEAIAILEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A++DTNS+PD + Y IPGNDD++R+I +CDL+A A +DG+A ++ G D + Sbjct: 181 NIPIIAILDTNSDPDGITYPIPGNDDAARAIQTYCDLIADAVLDGLAAGAAHSGVDLGAM 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 V E M E + + G E AV E+++ Sbjct: 241 ENPV----EPMLAEASAPVDADAAPAGTE-AVAEEMLA 273 >gi|300023429|ref|YP_003756040.1| ribosomal protein S2 [Hyphomicrobium denitrificans ATCC 51888] gi|299525250|gb|ADJ23719.1| ribosomal protein S2 [Hyphomicrobium denitrificans ATCC 51888] Length = 329 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 149/247 (60%), Positives = 190/247 (76%), Gaps = 1/247 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F +RQLLE+GV FGH+ WNPKM +I+ RN HI+DL+QTVPML +AL +S Sbjct: 1 MALPAFNMRQLLEAGVHFGHQAHRWNPKMAPFIYGSRNKIHILDLTQTVPMLHQALLKVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFVATK QASD + EAAKRSAQY +N +WLGG +TNWKTVSQSI++LR L+ Sbjct: 61 DTVAGGGRVLFVATKRQASDGIAEAAKRSAQYFINHRWLGGTLTNWKTVSQSIRRLRQLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L + QG TKKE LN+ R+RDKL ++L GI+DMGG PDL+ V+DTN+E +AIQEAR+L Sbjct: 121 DIL-ADPQGRTKKEVLNLTRERDKLNQSLGGIKDMGGTPDLLVVIDTNKESIAIQEARKL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVA+VDTN +PD +DY +PGNDD+ R+I L+CDL+A AA+DGI R G D ++ Sbjct: 180 NIPIVAIVDTNCDPDGIDYPVPGNDDAGRAITLYCDLMARAALDGIERAQGSSGIDIGAS 239 Query: 241 GETVVHS 247 Sbjct: 240 EAPPAED 246 >gi|296129331|ref|YP_003636581.1| ribosomal protein S2 [Cellulomonas flavigena DSM 20109] gi|296021146|gb|ADG74382.1| ribosomal protein S2 [Cellulomonas flavigena DSM 20109] Length = 326 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 117/260 (45%), Positives = 172/260 (66%), Gaps = 5/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A + +S T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYEFVSQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN+ TV + +Q+L++LE++ Sbjct: 61 VAHGGSILFVGTKKQAQEPVAEQAARVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEQI 120 Query: 123 LNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL + L GIRDM +P +++VDTN+E LA+ EAR+L Sbjct: 121 DFDDVAGSALTKKELLVLRREKDKLTKTLGGIRDMVKVPSAVWIVDTNKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-- 238 IP+VA++DTN +PD+VDY IPGNDD+ R++ L ++A A DG R+HS + + Sbjct: 181 GIPVVAILDTNCDPDVVDYPIPGNDDAIRAVQLLTRVIADAVADGTLRRHSGGSSAAQGG 240 Query: 239 -SAGETVVHSKEGMQLEEDS 257 + E + + + ++ Sbjct: 241 DADAEPLAEWERELLAGAEA 260 >gi|126462201|ref|YP_001043315.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides ATCC 17029] gi|166226745|sp|A3PJM7|RS2_RHOS1 RecName: Full=30S ribosomal protein S2 gi|126103865|gb|ABN76543.1| SSU ribosomal protein S2P [Rhodobacter sphaeroides ATCC 17029] Length = 251 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 143/253 (56%), Positives = 197/253 (77%), Gaps = 2/253 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 1 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L+ L+ Sbjct: 61 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKQLD 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 121 EVLATGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLLFIIDVGKEDLAIAEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN++P VDYVIPGNDD++R+IAL+CDLV+ AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNNSPKGVDYVIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGIDLGAL 240 Query: 241 GETVVHSKEGMQL 253 V +E ++ Sbjct: 241 D--VAPEEETLEA 251 >gi|138894769|ref|YP_001125222.1| 30S ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2] gi|166225274|sp|A4IMC3|RS2_GEOTN RecName: Full=30S ribosomal protein S2 gi|134266282|gb|ABO66477.1| Ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2] Length = 235 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 61 AGNGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|121533730|ref|ZP_01665557.1| ribosomal protein S2 [Thermosinus carboxydivorans Nor1] gi|121307721|gb|EAX48636.1| ribosomal protein S2 [Thermosinus carboxydivorans Nor1] Length = 234 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 103/229 (44%), Positives = 153/229 (66%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFIRDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G ILFV TK QA + V E A R + VN +WLGGM+TN++T+ + I +LR+LE++ Sbjct: 61 AAQGQSILFVGTKKQAQEAVKEEATRCDMFYVNERWLGGMLTNFQTIQKRINRLRELEDM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K KKE + + + ++L++ L GI++M LP +F++D +E++A+ EAR+L Sbjct: 121 EEKGVFDVLPKKEVMALRHEMERLQKFLGGIKNMNKLPGALFIIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +PD VDYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 IPIVAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTSKMADAVLEGRQGEQ 229 >gi|302542192|ref|ZP_07294534.1| ribosomal protein S2 [Streptomyces hygroscopicus ATCC 53653] gi|302459810|gb|EFL22903.1| ribosomal protein S2 [Streptomyces himastatinicus ATCC 53653] Length = 345 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 115/267 (43%), Positives = 174/267 (65%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS- 239 RIP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K+ Sbjct: 181 RIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDEKAD 240 Query: 240 --AGETVVHSKEGMQLEEDSQSSESSV 264 AGE + + + LE + ++ E Sbjct: 241 KGAGEPLAEWERDL-LEGEKKADEPEA 266 >gi|196247608|ref|ZP_03146310.1| ribosomal protein S2 [Geobacillus sp. G11MC16] gi|196212392|gb|EDY07149.1| ribosomal protein S2 [Geobacillus sp. G11MC16] Length = 235 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 61 AGNGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVPAE 235 >gi|134102476|ref|YP_001108137.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338] gi|291004133|ref|ZP_06562106.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338] gi|133915099|emb|CAM05212.1| 30S ribosomal protein S2 [Saccharopolyspora erythraea NRRL 2338] Length = 274 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 114/255 (44%), Positives = 165/255 (64%), Gaps = 6/255 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + A + T Sbjct: 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDGAYDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L++LE + Sbjct: 61 VAHGGTILFVGTKKQAQEAIAEQALRVGMPFVNQRWLGGMLTNFQTVHKRLQRLKELETM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKDKLEKTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-----HSYMGAD 236 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA DG+ + + G + Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADGVADGLMARSGRTNGAAEGEE 240 Query: 237 TKSAGETVVHSKEGM 251 + GE + ++ + Sbjct: 241 KPAGGEPLAEWEKEL 255 >gi|297626640|ref|YP_003688403.1| 30S ribosomal protein S2 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922405|emb|CBL56977.1| 30S ribosomal protein S2 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 325 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 124/278 (44%), Positives = 183/278 (65%), Gaps = 5/278 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + DT Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFNERNGIYIIDLRQSLTYIDKAYAFVKDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG++LFV TK QA + V+E A R V+ +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQVLFVGTKKQAQEAVVEQASRVGMPYVDQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + Q GFTKKE L R++ KL+++L GIRDM +P ++++DTN+E LA+ EAR+L Sbjct: 121 DLETVQPGGFTKKELLGFSREKTKLEKSLGGIRDMAKVPQAVWIIDTNKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD--TK 238 IP+VA++DTN +PD VDY IPGNDD+ RS+AL ++A A +G+ + + AD Sbjct: 181 HIPVVAILDTNCDPDEVDYPIPGNDDAIRSVALLTRIIADACAEGLVARQAKNQADGTEG 240 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 +A E + E LE ++ ++ D Q + E+ Sbjct: 241 AAAEPMAEW-EKELLESGEKAEKTEQTDEQAGELNAEV 277 >gi|189425764|ref|YP_001952941.1| 30S ribosomal protein S2 [Geobacter lovleyi SZ] gi|238692130|sp|B3E716|RS2_GEOLS RecName: Full=30S ribosomal protein S2 gi|189422023|gb|ACD96421.1| ribosomal protein S2 [Geobacter lovleyi SZ] Length = 257 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 106/256 (41%), Positives = 168/256 (65%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A + ++ Sbjct: 1 MSSISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKES 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +LFV TK QA D V E A R QY VN +WLGGM+TN+ TV QSI++L+ L+ + Sbjct: 61 AEQGNTVLFVGTKKQAQDSVAEEATRCGQYYVNQRWLGGMLTNFSTVKQSIERLKKLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +TKKE L ++++R+KL++ L GI++M LP +MFV+D E++A+QEA++L Sbjct: 121 FEDGTIEAYTKKEALKMDKEREKLEKVLGGIKNMNKLPGMMFVIDPKNEEIAVQEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +PD++D+VIPGNDD+ R+I L +A A +G ++ + + + A Sbjct: 181 IPVVAIVDTNCDPDMIDHVIPGNDDAIRAIRLLTAKIADAVQEGADARNVVLQSGAEGAD 240 Query: 242 ETVVHSKEGMQLEEDS 257 + + + E + Sbjct: 241 DLEEALADEVACEASA 256 >gi|326403885|ref|YP_004283967.1| 30S ribosomal protein S2 [Acidiphilium multivorum AIU301] gi|325050747|dbj|BAJ81085.1| 30S ribosomal protein S2 [Acidiphilium multivorum AIU301] Length = 256 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 142/259 (54%), Positives = 195/259 (75%), Gaps = 5/259 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P ++RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML++AL+ I Sbjct: 1 MAMPDVSLRQLLEAGVHFGHNTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLERALREIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK A++ V +AAKR QY VN +WLGGM+TNWKT++ SI+KLR +E Sbjct: 61 NVTAGGGRVLFVGTKRAAAEHVADAAKRCGQYYVNHRWLGGMLTNWKTITNSIRKLRQME 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + QG TKKE LN+ R+RDKL RAL GI++MGGLPD++F++DTN+EKLA++EA +L Sbjct: 121 ETLAGDGQGLTKKEMLNLMRERDKLDRALGGIKEMGGLPDILFIIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+NSNP+ V Y IPGNDD+ R+I L+CDLVA+A +DGI+ + + GAD + Sbjct: 181 GIPVVAVLDSNSNPEGVTYPIPGNDDAIRAITLYCDLVANAVLDGISAEMAASGADIGAL 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E + ++ED+++ Sbjct: 241 EELPAEA-----VDEDAEA 254 >gi|89068228|ref|ZP_01155638.1| ribosomal protein S2 [Oceanicola granulosus HTCC2516] gi|89046145|gb|EAR52203.1| ribosomal protein S2 [Oceanicola granulosus HTCC2516] Length = 298 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 142/239 (59%), Positives = 185/239 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNPKM YI+ RN HI+DL+QTVPML ALQ I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPKMAEYIYGARNGIHIMDLTQTVPMLDAALQAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA + EAA++ AQY +N +WLGG +TNW+TVSQSI +LR ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAQKPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLRAID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER++ KL +L GIR+MGG+PD++FV+D N+E LAI EA++L Sbjct: 121 EAADVGFEGLTKKERLGMEREQAKLTASLGGIREMGGVPDMLFVIDVNKEDLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VAVVDTN +P VDYVIPGNDD++R+IAL+CDLV+ AA+DG++ Q G D Sbjct: 181 GIPVVAVVDTNCSPAGVDYVIPGNDDAARAIALYCDLVSRAALDGMSAQLGAAGVDLGE 239 >gi|77463347|ref|YP_352851.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides 2.4.1] gi|221639196|ref|YP_002525458.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides KD131] gi|332558223|ref|ZP_08412545.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides WS8N] gi|123591999|sp|Q3J2N4|RS2_RHOS4 RecName: Full=30S ribosomal protein S2 gi|254764488|sp|B9KSF0|RS2_RHOSK RecName: Full=30S ribosomal protein S2 gi|77387765|gb|ABA78950.1| SSU ribosomal protein S2P [Rhodobacter sphaeroides 2.4.1] gi|221159977|gb|ACM00957.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides KD131] gi|332275935|gb|EGJ21250.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides WS8N] Length = 253 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 143/253 (56%), Positives = 197/253 (77%), Gaps = 2/253 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 3 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L+ L+ Sbjct: 63 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKQLD 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+L +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 123 EVLATGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLLFIIDVGKEDLAIAEAQKL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN++P VDYVIPGNDD++R+IAL+CDLV+ AA+DG++ Q G D + Sbjct: 183 GIPVVAVVDTNNSPKGVDYVIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGIDLGAL 242 Query: 241 GETVVHSKEGMQL 253 V +E ++ Sbjct: 243 D--VAPEEETLEA 253 >gi|209573717|sp|Q0RDQ4|RS2_FRAAA RecName: Full=30S ribosomal protein S2 Length = 291 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 124/266 (46%), Positives = 174/266 (65%), Gaps = 5/266 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +T Sbjct: 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 61 VAHGGTVLFIGTKKQAQEAIEEQAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L Sbjct: 121 EVTGGTEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK-- 238 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA A DG +AR + AD K Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASKAADAKPE 240 Query: 239 -SAGETVVHSKEGMQLEEDSQSSESS 263 SAGE + E L + + +S Sbjct: 241 QSAGEEPLAEWEQALLRGEGTAPAAS 266 >gi|313836790|gb|EFS74504.1| ribosomal protein S2 [Propionibacterium acnes HL037PA2] gi|314929802|gb|EFS93633.1| ribosomal protein S2 [Propionibacterium acnes HL044PA1] gi|314972231|gb|EFT16328.1| ribosomal protein S2 [Propionibacterium acnes HL037PA3] gi|328907658|gb|EGG27422.1| 30S ribosomal protein S2 [Propionibacterium sp. P08] Length = 283 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 119/276 (43%), Positives = 179/276 (64%), Gaps = 2/276 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYTFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + + E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIAEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P +++VDT +E LAI EAR+L Sbjct: 121 DLDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWIVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L +VA A +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIVADAVAEGLMARSAGKSGEQTAE 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 E + + + +D+++ + D E E+ Sbjct: 241 AEPMPDWERELLEGDDAKAEDKKTEDKTEANKADEV 276 >gi|255263690|ref|ZP_05343032.1| ribosomal protein S2 [Thalassiobium sp. R2A62] gi|255106025|gb|EET48699.1| ribosomal protein S2 [Thalassiobium sp. R2A62] Length = 264 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 140/239 (58%), Positives = 186/239 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNPKM++YI+ RN HI+DL+QTVPML AL V+ Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPKMQQYIYGSRNGIHIMDLTQTVPMLDAALNVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+GGR+LFV TK QA + +AA++SAQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 ETVAKGGRVLFVGTKRQAQRPIADAAEKSAQYYMNHRWLGGTLTNWQTVSQSINRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA++L Sbjct: 121 EAMETGFEGLTKKERLGMERDQGKLQASLGGIREMGGVPDLLFVIDVRKEDLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VAVVDTN +PD VDYVIPGNDD++R+IAL+ DLVA AA+DG+ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGVDYVIPGNDDAARAIALYTDLVARAALDGMTAQMGAAGIDLGE 239 >gi|229544422|ref|ZP_04433480.1| ribosomal protein S2 [Bacillus coagulans 36D1] gi|229324907|gb|EEN90584.1| ribosomal protein S2 [Bacillus coagulans 36D1] Length = 251 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 9/254 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA + V + A+RS + VN +WLGG +TN++T+ + I +L+ +E++ Sbjct: 61 AGNGGNILFVGTKKQAQESVKDEAERSGMFYVNHRWLGGTLTNFETIQKRIDRLKQIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L + L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVVQLKKEHDRLVKFLGGIKDMRNLPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + A Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAIVEAKQGE--------EGAA 232 Query: 242 ETVVHSKEGMQLEE 255 E S E EE Sbjct: 233 EVPAESGEAAGTEE 246 >gi|116492643|ref|YP_804378.1| SSU ribosomal protein S2P [Pediococcus pentosaceus ATCC 25745] gi|122265893|sp|Q03FT6|RS2_PEDPA RecName: Full=30S ribosomal protein S2 gi|116102793|gb|ABJ67936.1| SSU ribosomal protein S2P [Pediococcus pentosaceus ATCC 25745] Length = 260 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 111/266 (41%), Positives = 165/266 (62%), Gaps = 7/266 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV ++ A + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + E AKR+ QY VN +WLGG +TNW T+ + I++L+DL+ + Sbjct: 61 AANDGVVLFVGTKKQAQTAIEEEAKRAGQYFVNHRWLGGTLTNWNTIQKRIKRLKDLKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++DKL++ L GI DM PD++FVVD +E++AI+EA++L Sbjct: 121 EEDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHTPDVLFVVDPRKEQIAIKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTNS+PD VD +IP NDD+ R++ L +A A I+G G D + A Sbjct: 181 IPVVAMVDTNSDPDQVDVIIPSNDDAIRAVRLITAKMADAVIEGRQ------GEDEEEAS 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG 267 + V LE+ +S E + Sbjct: 235 QEVAEGVSKDSLEDLKKSVEEGSNEE 260 >gi|322420126|ref|YP_004199349.1| 30S ribosomal protein S2 [Geobacter sp. M18] gi|320126513|gb|ADW14073.1| ribosomal protein S2 [Geobacter sp. M18] Length = 255 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 104/236 (44%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A ++D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R Q+ VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQSGDTVLFVGTKKQAQDSVAEEAQRCGQFFVNDRWLGGMLTNFSTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE+L + ++R+KL++ L GI+ MG +P ++FVVD E++A+ EA++L Sbjct: 121 IADGTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+VA+VDTN +PD ++YVIPGNDD+ R+I L +A A ++G +++ + Sbjct: 181 IPVVAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGAQARNARLQTGA 236 >gi|89054797|ref|YP_510248.1| 30S ribosomal protein S2 [Jannaschia sp. CCS1] gi|123286546|sp|Q28PY9|RS2_JANSC RecName: Full=30S ribosomal protein S2 gi|88864346|gb|ABD55223.1| SSU ribosomal protein S2P [Jannaschia sp. CCS1] Length = 276 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 141/246 (57%), Positives = 192/246 (78%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ +RN HI+DL+QT PML++ALQV+ Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGEFIYGDRNGIHILDLTQTHPMLEQALQVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+GGRILFV TK QA V +AA+R AQY +N +WLGG +TNWKTVS SI +L++++ Sbjct: 61 ETVAKGGRILFVGTKRQAQKPVADAAERCAQYYMNHRWLGGTLTNWKTVSNSISRLKEID 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + +G TKKERL +ER + KL+ +L GIR+MGGLPDL+FV+D N+E LAI EA++ Sbjct: 121 EKTADGSLEGLTKKERLGMERDQIKLQASLGGIREMGGLPDLIFVIDVNKEDLAIAEAKK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVDTN +PD VDY+IPGNDD++R+IAL+CDL++ AA+DG++ Q G D + Sbjct: 181 LGIPVVAVVDTNCSPDGVDYIIPGNDDAARAIALYCDLISRAALDGMSTQLETAGVDLGA 240 Query: 240 AGETVV 245 E V Sbjct: 241 LEEGSV 246 >gi|15610027|ref|NP_217406.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Rv] gi|15842432|ref|NP_337469.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis CDC1551] gi|31794066|ref|NP_856559.1| 30S ribosomal protein S2 [Mycobacterium bovis AF2122/97] gi|121638771|ref|YP_978995.1| 30S ribosomal protein S2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662734|ref|YP_001284257.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Ra] gi|148824079|ref|YP_001288833.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis F11] gi|167969518|ref|ZP_02551795.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Ra] gi|215404864|ref|ZP_03417045.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis 02_1987] gi|215412732|ref|ZP_03421444.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis 94_M4241A] gi|215428331|ref|ZP_03426250.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T92] gi|215431837|ref|ZP_03429756.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis EAS054] gi|215447153|ref|ZP_03433905.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T85] gi|218754642|ref|ZP_03533438.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis GM 1503] gi|219558912|ref|ZP_03537988.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T17] gi|224991263|ref|YP_002645952.1| 30S ribosomal protein S2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253798022|ref|YP_003031023.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 1435] gi|254232985|ref|ZP_04926312.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis C] gi|254365530|ref|ZP_04981575.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis str. Haarlem] gi|254551961|ref|ZP_05142408.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187908|ref|ZP_05765382.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis CPHL_A] gi|260202023|ref|ZP_05769514.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis T46] gi|260206206|ref|ZP_05773697.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis K85] gi|289444445|ref|ZP_06434189.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T46] gi|289448556|ref|ZP_06438300.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis CPHL_A] gi|289553321|ref|ZP_06442531.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 605] gi|289571080|ref|ZP_06451307.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T17] gi|289575595|ref|ZP_06455822.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis K85] gi|289746689|ref|ZP_06506067.1| ribosomal protein S2 [Mycobacterium tuberculosis 02_1987] gi|289751555|ref|ZP_06510933.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T92] gi|289755002|ref|ZP_06514380.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis EAS054] gi|289759011|ref|ZP_06518389.1| ribosomal protein S2 [Mycobacterium tuberculosis T85] gi|289763067|ref|ZP_06522445.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis GM 1503] gi|294994015|ref|ZP_06799706.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis 210] gi|297635507|ref|ZP_06953287.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis KZN 4207] gi|297732506|ref|ZP_06961624.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis KZN R506] gi|298526359|ref|ZP_07013768.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis 94_M4241A] gi|306777177|ref|ZP_07415514.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu001] gi|306781084|ref|ZP_07419421.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu002] gi|306785723|ref|ZP_07424045.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu003] gi|306789763|ref|ZP_07428085.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu004] gi|306794577|ref|ZP_07432879.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu005] gi|306798818|ref|ZP_07437120.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu006] gi|306804665|ref|ZP_07441333.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu008] gi|306808858|ref|ZP_07445526.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu007] gi|306968957|ref|ZP_07481618.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu009] gi|306973294|ref|ZP_07485955.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu010] gi|307081002|ref|ZP_07490172.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu011] gi|307085599|ref|ZP_07494712.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu012] gi|313659838|ref|ZP_07816718.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis KZN V2475] gi|54039452|sp|P66538|RS2_MYCBO RecName: Full=30S ribosomal protein S2 gi|54041953|sp|P66537|RS2_MYCTU RecName: Full=30S ribosomal protein S2 gi|1403411|emb|CAA98366.1| PROBABLE 30S RIBOSOMAL PROTEIN S2 RPSB [Mycobacterium tuberculosis H37Rv] gi|13882734|gb|AAK47283.1| ribosomal protein S2 [Mycobacterium tuberculosis CDC1551] gi|31619661|emb|CAD96601.1| PROBABLE 30S RIBOSOMAL PROTEIN S2 RPSB [Mycobacterium bovis AF2122/97] gi|121494419|emb|CAL72900.1| Probable 30S ribosomal protein S2 rpsB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124602044|gb|EAY61054.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis C] gi|134151043|gb|EBA43088.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis str. Haarlem] gi|148506886|gb|ABQ74695.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis H37Ra] gi|148722606|gb|ABR07231.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis F11] gi|224774378|dbj|BAH27184.1| 30S ribosomal protein S2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319525|gb|ACT24128.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 1435] gi|289417364|gb|EFD14604.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T46] gi|289421514|gb|EFD18715.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis CPHL_A] gi|289437953|gb|EFD20446.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 605] gi|289540026|gb|EFD44604.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis K85] gi|289544834|gb|EFD48482.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T17] gi|289687217|gb|EFD54705.1| ribosomal protein S2 [Mycobacterium tuberculosis 02_1987] gi|289692142|gb|EFD59571.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis T92] gi|289695589|gb|EFD63018.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis EAS054] gi|289710573|gb|EFD74589.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis GM 1503] gi|289714575|gb|EFD78587.1| ribosomal protein S2 [Mycobacterium tuberculosis T85] gi|298496153|gb|EFI31447.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis 94_M4241A] gi|308214461|gb|EFO73860.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu001] gi|308326072|gb|EFP14923.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu002] gi|308329636|gb|EFP18487.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu003] gi|308333775|gb|EFP22626.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu004] gi|308337169|gb|EFP26020.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu005] gi|308340936|gb|EFP29787.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu006] gi|308344812|gb|EFP33663.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu007] gi|308348760|gb|EFP37611.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu008] gi|308353461|gb|EFP42312.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu009] gi|308357326|gb|EFP46177.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu010] gi|308361210|gb|EFP50061.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu011] gi|308364906|gb|EFP53757.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis SUMu012] gi|323718500|gb|EGB27671.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis CDC1551A] gi|326904504|gb|EGE51437.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis W-148] gi|328457796|gb|AEB03219.1| 30S ribosomal protein S2 rpsB [Mycobacterium tuberculosis KZN 4207] Length = 287 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 118/286 (41%), Positives = 176/286 (61%), Gaps = 10/286 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGSVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + AD K Sbjct: 181 IPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQARAGLGRADGKPEA 240 Query: 242 ---------ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E + + + +S +++ D A P + Sbjct: 241 EAAEPLAEWEQELLASATASATPSATASTTALTDAPAGATEPTTDA 286 >gi|239944633|ref|ZP_04696570.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 15998] gi|239991097|ref|ZP_04711761.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 11379] gi|291448097|ref|ZP_06587487.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 15998] gi|291351044|gb|EFE77948.1| 30S ribosomal protein S2 [Streptomyces roseosporus NRRL 15998] Length = 304 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 116/277 (41%), Positives = 176/277 (63%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELELI 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSK----EGMQLEEDSQSSESSVLDGQE 269 K+AGE + + EG + +E + ++E E Sbjct: 241 EKAAGEPLAEWERDLLEGDKKDETAAAAEVQSSAETE 277 >gi|312194962|ref|YP_004015023.1| ribosomal protein S2 [Frankia sp. EuI1c] gi|311226298|gb|ADP79153.1| ribosomal protein S2 [Frankia sp. EuI1c] Length = 292 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 122/287 (42%), Positives = 176/287 (61%), Gaps = 11/287 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTKRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG +LF+ TK QA + V E A+R V +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 61 VGHGGTVLFIGTKKQAQEAVEEQARRVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L Sbjct: 121 ELTGGTEVRTKKEQLVLSREKTKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--- 238 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA A G+ + AD K Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAAGLMSRAGASAADVKPDQ 240 Query: 239 -SAGETVVHSKEGMQLEEDSQSSES------SVLDGQEVAVVPELMS 278 +A E + ++ + + + +V + EV E +S Sbjct: 241 IAAAEPLAEWEQEVLRRDAEAAPAEAAVETPAVTEAVEVEAPAETVS 287 >gi|20807856|ref|NP_623027.1| 30S ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4] gi|25009202|sp|Q8RA21|RS2_THETN RecName: Full=30S ribosomal protein S2 gi|20516420|gb|AAM24631.1| Ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4] Length = 235 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 100/235 (42%), Positives = 153/235 (65%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV L++A + + Sbjct: 1 MSIVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG ILFV TK QA + + E A+R + VN +WLGG +TN+KT+ IQ+L++L+ + Sbjct: 61 VMDGGTILFVGTKKQAQESIKEEAERCGMFYVNQRWLGGTLTNFKTIKTRIQRLKELKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +++++L++ L GI +M LP +F+VD +E +A+ EAR L Sbjct: 121 EEDGTFEVLPKKEVIRLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVSEARALE 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVA+VDTN +P+L+DY IPGNDD+ R++ L +A A ++G + + Sbjct: 181 IPIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVLEGKQGEQFEAAEE 235 >gi|297717884|gb|ADI50085.1| SSU ribosomal protein S2p [Candidatus Odyssella thessalonicensis L13] Length = 254 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 139/252 (55%), Positives = 188/252 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQLLE+G+ +GH WNPKM ++F RNN HIIDL QTV +L +AL+ I Sbjct: 1 MALPTFTMRQLLEAGIHYGHHTRRWNPKMAPFLFGVRNNIHIIDLEQTVNLLHRALEAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GGR+LFV TK QAS V EAA + QY +N +WLGG +TNWKTV+QSI+++++ E Sbjct: 61 NTVAAGGRVLFVGTKPQASAKVKEAALKCGQYYINHRWLGGTLTNWKTVNQSIKRMKEQE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E LN+ +QG TKKE+L+++R+ +KL+ AL GIRDMGGLPDL+FV+DTN+E +AIQEARRL Sbjct: 121 ERLNQHSQGLTKKEQLDLQREYNKLELALGGIRDMGGLPDLLFVIDTNKEAIAIQEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+V V+D+NS+P V Y IPGNDD+ R+I ++C+LVA A +DG+ + + G D +A Sbjct: 181 GIPVVGVLDSNSDPAGVSYPIPGNDDAQRAIQMYCELVAGAVLDGLQAEMASAGIDIGAA 240 Query: 241 GETVVHSKEGMQ 252 E + Sbjct: 241 AELPAEMLASEE 252 >gi|148260691|ref|YP_001234818.1| 30S ribosomal protein S2 [Acidiphilium cryptum JF-5] gi|166225232|sp|A5FZ67|RS2_ACICJ RecName: Full=30S ribosomal protein S2 gi|146402372|gb|ABQ30899.1| SSU ribosomal protein S2P [Acidiphilium cryptum JF-5] Length = 256 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 142/259 (54%), Positives = 194/259 (74%), Gaps = 5/259 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P ++RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML++AL+ I Sbjct: 1 MAMPDVSLRQLLEAGVHFGHNTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLERALREIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK A++ V AAKR QY VN +WLGGM+TNWKT++ SI+KLR +E Sbjct: 61 NVTAGGGRVLFVGTKRAAAEHVAYAAKRCGQYYVNHRWLGGMLTNWKTITNSIRKLRQME 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + QG TKKE LN+ R+RDKL RAL GI++MGGLPD++F++DTN+EKLA++EA +L Sbjct: 121 ETLAGDGQGLTKKEMLNLMRERDKLDRALGGIKEMGGLPDILFIIDTNKEKLAVEEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+D+NSNP+ V Y IPGNDD+ R+I L+CDLVA+A +DGI+ + + GAD + Sbjct: 181 GIPVVAVLDSNSNPEGVTYPIPGNDDAIRAITLYCDLVANAVLDGISAEMAASGADIGAL 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E + ++ED+++ Sbjct: 241 EELPAEA-----VDEDAEA 254 >gi|78222464|ref|YP_384211.1| 30S ribosomal protein S2 [Geobacter metallireducens GS-15] gi|123756464|sp|Q39W88|RS2_GEOMG RecName: Full=30S ribosomal protein S2 gi|78193719|gb|ABB31486.1| SSU ribosomal protein S2P [Geobacter metallireducens GS-15] Length = 251 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 106/232 (45%), Positives = 153/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + + Sbjct: 1 MSSVTMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVREC 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA D + E A R Y VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQSGETILFVGTKKQAQDAIGEEASRCNMYYVNQRWLGGMLTNFATVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +TKKE L +E++R KL++ L GI+ MG +P +FV+D E +AI EA++L Sbjct: 121 FADGTVEAYTKKEALQLEKERQKLEKTLGGIKGMGKVPGALFVIDPKNETIAINEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP+VAVVDTN +PD +DYVIPGNDD+ R+I L +A A ++G + + + Sbjct: 181 IPVVAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVLEGAQARDAQL 232 >gi|326776290|ref|ZP_08235555.1| ribosomal protein S2 [Streptomyces cf. griseus XylebKG-1] gi|326656623|gb|EGE41469.1| ribosomal protein S2 [Streptomyces cf. griseus XylebKG-1] Length = 304 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 116/277 (41%), Positives = 176/277 (63%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELELI 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSK----EGMQLEEDSQSSESSVLDGQE 269 K+AGE + + EG + +E + ++E E Sbjct: 241 EKAAGEPLAEWERDLLEGDKKDETAAAAEVQTSAETE 277 >gi|182435656|ref|YP_001823375.1| 30S ribosomal protein S2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|238689006|sp|B1VYT7|RS2_STRGG RecName: Full=30S ribosomal protein S2 gi|178464172|dbj|BAG18692.1| putative 30S ribosomal protein S2 [Streptomyces griseus subsp. griseus NBRC 13350] Length = 306 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 116/277 (41%), Positives = 176/277 (63%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELELI 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSK----EGMQLEEDSQSSESSVLDGQE 269 K+AGE + + EG + +E + ++E E Sbjct: 241 EKAAGEPLAEWERDLLEGDKKDETAAAAEVQTSAETE 277 >gi|144897594|emb|CAM74458.1| 30S ribosomal protein S2 [Magnetospirillum gryphiswaldense MSR-1] Length = 264 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 130/247 (52%), Positives = 180/247 (72%), Gaps = 1/247 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M++P F++RQL+E+GV FGH WNPKM ++F RN HIIDL Q+VPML A+ + Sbjct: 1 MSMPTFSMRQLVEAGVHFGHNTRRWNPKMAPFLFGIRNGIHIIDLQQSVPMLHAAMTAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + VA GGR+LFV TK ASD V EAAK+ QY VN +WLGGM+TNWKT+S SI++LR+L+ Sbjct: 61 NVVAGGGRVLFVGTKRAASDTVAEAAKKCGQYYVNHRWLGGMLTNWKTISHSIKRLRELD 120 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+L + G TKKE+L + R+++KL RAL GI+DMGGLPD++F++DTN+E LA+QEA + Sbjct: 121 EMLASGTLAGLTKKEQLVLAREKEKLDRALGGIKDMGGLPDILFIIDTNKEALAVQEANK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++D+NS+P V + +PGNDD+ R+I +CDL+ A +DGI + G D + Sbjct: 181 LGIPVVAILDSNSDPSGVQFPVPGNDDAIRAIQTYCDLMVGAVLDGIQAEIGRSGGDIGA 240 Query: 240 AGETVVH 246 E V Sbjct: 241 QAEAPVE 247 >gi|289522431|ref|ZP_06439285.1| ribosomal protein S2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504267|gb|EFD25431.1| ribosomal protein S2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 320 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 103/234 (44%), Positives = 161/234 (68%), Gaps = 1/234 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +L +++QLLE GV FGH+ W+PKM+ YIF ERN +IIDL +TV +++A + + Sbjct: 38 SLSVVSMKQLLECGVHFGHQTRRWDPKMKPYIFAERNGIYIIDLQKTVRAIERAYDFLRE 97 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG +LFV TK QA + + E A+R Q+ +N +WLGG++TN+ T+S+ ++++ +L+E Sbjct: 98 VSKGGGTVLFVGTKRQAQETIKEEAERCGQFYINQRWLGGLLTNFSTLSKRVRRMIELQE 157 Query: 122 LLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + K E Q + KKE + + +++++L++ L GIR+M LPD +FV+D RE +A+ EAR+L Sbjct: 158 MEEKGEFQKYPKKEVIKLRKEKERLEKYLGGIRNMRDLPDALFVIDPRREYIAVAEARKL 217 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IPI++VVDTN +P L+D+ IPGNDD+ R+I L L+A A I+G S G Sbjct: 218 YIPIISVVDTNCDPTLIDFPIPGNDDAIRAIRLITSLMADAVIEGRQGVDSMGG 271 >gi|253700110|ref|YP_003021299.1| 30S ribosomal protein S2 [Geobacter sp. M21] gi|259495215|sp|C6E512|RS2_GEOSM RecName: Full=30S ribosomal protein S2 gi|251774960|gb|ACT17541.1| ribosomal protein S2 [Geobacter sp. M21] Length = 255 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 104/236 (44%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A ++D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R Q+ VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQAGETVLFVGTKKQAQDSVAEEAQRCGQFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE+L + ++R+KL++ L GI+ MG +P ++FVVD E++A+ EA++L Sbjct: 121 IADGTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+VA+VDTN +PD ++YVIPGNDD+ R+I L +A A ++G +++ + Sbjct: 181 IPVVAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGGQARNARLQTGA 236 >gi|301062044|ref|ZP_07202752.1| ribosomal protein S2 [delta proteobacterium NaphS2] gi|300443852|gb|EFK07909.1| ribosomal protein S2 [delta proteobacterium NaphS2] Length = 288 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 177/277 (63%), Gaps = 7/277 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH+ WNPKM+ YIF RN HIIDL +TV + + A + T Sbjct: 1 MSAINMKQLLEAGVHFGHQTRRWNPKMKPYIFGARNGIHIIDLQKTVRLFKTAYDFVVKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK Q D V+E ++R + + ++WLGG +TN++T+ QSI++L+DLE++ Sbjct: 61 VADGYPVLFVGTKKQGHDAVIEESERCGMFFMVNRWLGGTLTNFQTIKQSIKRLKDLEKM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +TKKE L +E++ KL++ L GI++M LP +FV+D REK+A++EAR+L Sbjct: 121 KEDGSIARYTKKEVLQMEKELSKLEKNLGGIKNMDELPGAVFVIDPKREKIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+ D+N +PD +D +IPGNDD+ R+I L +A A I+G A + A+ + Sbjct: 181 IPVVAIADSNCDPDDIDLIIPGNDDAIRAIRLITSKIADACIEGHAIAEQRLRAEDAAKK 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E KE +EE ++S + G EV ++P+ S Sbjct: 241 E-----KEAASVEEKPEAS-AGEDGGPEVIILPKTES 271 >gi|307330050|ref|ZP_07609201.1| ribosomal protein S2 [Streptomyces violaceusniger Tu 4113] gi|306884311|gb|EFN15346.1| ribosomal protein S2 [Streptomyces violaceusniger Tu 4113] Length = 325 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 119/282 (42%), Positives = 179/282 (63%), Gaps = 9/282 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--- 237 RIP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 RIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSGVATGDEKAD 240 Query: 238 KSAGETVVHSK----EGMQLEEDSQSSESSVLDGQEVAVVPE 275 K+AGE + + EG + ED+++ + E A E Sbjct: 241 KAAGEPLAEWERDLLEGEKKAEDAEAKPAEDAKPAEDAKPAE 282 >gi|72161080|ref|YP_288737.1| 30S ribosomal protein S2 [Thermobifida fusca YX] gi|123774765|sp|Q47S53|RS2_THEFY RecName: Full=30S ribosomal protein S2 gi|71914812|gb|AAZ54714.1| SSU ribosomal protein S2P [Thermobifida fusca YX] Length = 292 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 117/248 (47%), Positives = 168/248 (67%), Gaps = 2/248 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 TIRQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + + +TVA Sbjct: 5 VTIRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLSYIDRAYEFVKETVAH 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE--LL 123 GG ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + +Q+L++LEE Sbjct: 65 GGTILFVGTKKQAQEAIYEQARRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEEIDFD 124 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + G TKKE L + R+++KL+R L GIRDM +P +++VDT +E +AI EAR+L IP Sbjct: 125 DVASSGLTKKELLGLRREKEKLERTLGGIRDMNRVPSAVWIVDTKKEHIAISEARKLNIP 184 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA++DTN +PD VDY IPGNDD+ RS++L +VA A +G+ + K AGE Sbjct: 185 VVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVVADAVAEGLMIRSGGAPGSEKGAGEP 244 Query: 244 VVHSKEGM 251 + + + Sbjct: 245 LAEWEREL 252 >gi|304384857|ref|ZP_07367203.1| 30S ribosomal protein S2 [Pediococcus acidilactici DSM 20284] gi|1350975|sp|P49668|RS2_PEDAC RecName: Full=30S ribosomal protein S2 gi|897795|emb|CAA50276.1| 30S ribosomal protein [Pediococcus acidilactici] gi|304329051|gb|EFL96271.1| 30S ribosomal protein S2 [Pediococcus acidilactici DSM 20284] Length = 261 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 105/261 (40%), Positives = 165/261 (63%), Gaps = 1/261 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV ++ A + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + E AKR+ Q+ VN +WLGG +TNW T+ + I++L+DL+++ Sbjct: 61 AANDGVVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++DKL++ L GI DM +PD++FVVD +E++AI+EA++L Sbjct: 121 EEDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFVVDPRKEQIAIKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD VD +IP NDD+ R++ L +A A ++G + + A Sbjct: 181 IPVVAMVDTNTDPDQVDVIIPSNDDAIRAVRLITSKMADAVVEGRQGEDDEAVQQEEVAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 S E ++ + S+E Sbjct: 241 GVSKDSLEDLKKTVEEGSNEE 261 >gi|270290324|ref|ZP_06196549.1| 30S ribosomal protein S2 [Pediococcus acidilactici 7_4] gi|270281105|gb|EFA26938.1| 30S ribosomal protein S2 [Pediococcus acidilactici 7_4] Length = 261 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 106/261 (40%), Positives = 165/261 (63%), Gaps = 1/261 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV ++ A + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + E AKR+ Q+ VN +WLGG +TNW T+ + I++L+DL+++ Sbjct: 61 AANDGVVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++DKL++ L GI DM +PD++FVVD +E++AI+EA++L Sbjct: 121 EEDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFVVDPRKEQIAIKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD VD +IP NDD+ R+I L +A A ++G + + A Sbjct: 181 IPVVAMVDTNTDPDQVDVIIPSNDDAIRAIRLITSKMADAVVEGRQGEDDEAVQQEEVAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 S E ++ + S+E Sbjct: 241 GVSKDSLEDLKKTVEEGSNEE 261 >gi|169830790|ref|YP_001716772.1| 30S ribosomal protein S2 [Candidatus Desulforudis audaxviator MP104C] gi|238688233|sp|B1I2K0|RS2_DESAP RecName: Full=30S ribosomal protein S2 gi|169637634|gb|ACA59140.1| ribosomal protein S2 [Candidatus Desulforudis audaxviator MP104C] Length = 244 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 102/244 (41%), Positives = 155/244 (63%), Gaps = 1/244 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++A I Sbjct: 1 MAIVTMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVRKIEEAYNFIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA V+E A R + VN +WLGGM+TN++T+ + I +L++LE++ Sbjct: 61 VAEGQTVLFVGTKKQAQLTVVEEAGRCGMFYVNQRWLGGMLTNFQTIRRRIDRLKELEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +L++ L GI+DM LP +FV+D +E++A+ EAR+L Sbjct: 121 EAEGRFEVLPKKEVAELMHEKQRLEKYLKGIKDMTKLPGALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DY+IPGNDD+ R++ L +A A ++G + D ++ Sbjct: 181 IPIVAIVDTNCDPDEIDYIIPGNDDAIRAVRLLTSRMADAVLEGRQGEQLAPEPDQEAVV 240 Query: 242 ETVV 245 E Sbjct: 241 EAEA 244 >gi|318056581|ref|ZP_07975304.1| 30S ribosomal protein S2 [Streptomyces sp. SA3_actG] gi|318075682|ref|ZP_07983014.1| 30S ribosomal protein S2 [Streptomyces sp. SA3_actF] Length = 307 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 114/277 (41%), Positives = 175/277 (63%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSK----EGMQLEEDSQSSESSVLDGQE 269 K+AGE + + +G + +E + +E E Sbjct: 241 EKAAGEPLAEWERDLLDGDKKDESAAEAEVQTSAETE 277 >gi|302522175|ref|ZP_07274517.1| ribosomal protein S2 [Streptomyces sp. SPB78] gi|333024155|ref|ZP_08452219.1| putative 30S ribosomal protein S2 [Streptomyces sp. Tu6071] gi|302431070|gb|EFL02886.1| ribosomal protein S2 [Streptomyces sp. SPB78] gi|332744007|gb|EGJ74448.1| putative 30S ribosomal protein S2 [Streptomyces sp. Tu6071] Length = 302 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 114/277 (41%), Positives = 175/277 (63%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSK----EGMQLEEDSQSSESSVLDGQE 269 K+AGE + + +G + +E + +E E Sbjct: 241 EKAAGEPLAEWERDLLDGDKKDESAAEAEVQTSAETE 277 >gi|116495068|ref|YP_806802.1| 30S ribosomal protein S2 [Lactobacillus casei ATCC 334] gi|191638571|ref|YP_001987737.1| 30S ribosomal protein S2 [Lactobacillus casei BL23] gi|227534920|ref|ZP_03964969.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631337|ref|ZP_04674368.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066631|ref|YP_003788654.1| 30S ribosomal protein L2 [Lactobacillus casei str. Zhang] gi|122263515|sp|Q038L2|RS2_LACC3 RecName: Full=30S ribosomal protein S2 gi|238693050|sp|B3WES8|RS2_LACCB RecName: Full=30S ribosomal protein S2 gi|116105218|gb|ABJ70360.1| SSU ribosomal protein S2P [Lactobacillus casei ATCC 334] gi|190712873|emb|CAQ66879.1| 30S ribosomal protein S2 [Lactobacillus casei BL23] gi|227187676|gb|EEI67743.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525802|gb|EEQ64803.1| 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439038|gb|ADK18804.1| Ribosomal protein S2 [Lactobacillus casei str. Zhang] gi|327382610|gb|AEA54086.1| 30S ribosomal protein S2 [Lactobacillus casei LC2W] gi|327385807|gb|AEA57281.1| 30S ribosomal protein S2 [Lactobacillus casei BD-II] Length = 262 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 108/262 (41%), Positives = 169/262 (64%), Gaps = 3/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + + Sbjct: 1 MAVLSMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDDAYNFVKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ I++L+D++++ Sbjct: 61 AQNGGVFLFVGTKKQAQDAIAEEATRAGQYYVNHRWLGGTLTNWNTIQTRIKRLKDIKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +++++DKL++ L GI DM +PD++F+VD +EK+A+QEA++L Sbjct: 121 ATDGTFDVLPKKEVSLLKKQQDKLEKFLGGIEDMPRIPDVLFIVDPRKEKIAVQEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + A Sbjct: 181 IPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAIIEGNQGEDQDDAQEQQVAA 240 Query: 242 ETVVHSKEGM--QLEEDSQSSE 261 + S E + +E D++S++ Sbjct: 241 DKKADSMEDIVEAVEGDNKSAK 262 >gi|313901481|ref|ZP_07834934.1| SSU ribosomal protein S2P [Thermaerobacter subterraneus DSM 13965] gi|313468255|gb|EFR63716.1| SSU ribosomal protein S2P [Thermaerobacter subterraneus DSM 13965] Length = 233 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 152/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +L +A + + Sbjct: 1 MPVVAMKQLLEAGVHFGHQTRRWNPKMRPYIFMERNGIYIIDLQKTVRLLDEAYHFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GGRILFV TK QA + + E A R ++ +N +WLGG +TN+ T+ I +L +LE++ Sbjct: 61 VAQGGRILFVGTKKQAREAIAEEATRCGEFYINERWLGGTLTNFATIRTRIDRLAELEQM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+++KL++ L GI+ M LPD ++VVD +EK+A+ EAR+L Sbjct: 121 EAEGHFDRLPKKEVARLLREKEKLEKYLGGIKGMKDLPDAVYVVDPRKEKIAVSEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPVVAIVDTNCDPEEVDYVIPGNDDAIRAVRLITGKIADAVLEGKQ 226 >gi|328885350|emb|CCA58589.1| SSU ribosomal protein S2p [Streptomyces venezuelae ATCC 10712] Length = 299 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 171/273 (62%), Gaps = 6/273 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 K+AGE + + + E +E E Sbjct: 241 EKAAGEPLAEWERDLLEGEKKDEAEVQTSAETE 273 >gi|297530576|ref|YP_003671851.1| ribosomal protein S2 [Geobacillus sp. C56-T3] gi|319766264|ref|YP_004131765.1| ribosomal protein S2 [Geobacillus sp. Y412MC52] gi|297253828|gb|ADI27274.1| ribosomal protein S2 [Geobacillus sp. C56-T3] gi|317111130|gb|ADU93622.1| ribosomal protein S2 [Geobacillus sp. Y412MC52] Length = 235 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 61 AANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|295836274|ref|ZP_06823207.1| ribosomal protein S2 [Streptomyces sp. SPB74] gi|197697361|gb|EDY44294.1| ribosomal protein S2 [Streptomyces sp. SPB74] Length = 302 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 113/280 (40%), Positives = 178/280 (63%), Gaps = 11/280 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSKEGM-----QLEEDSQSSESSVLDGQEVA 271 K+AGE + + + + E +++ + + ++VA Sbjct: 241 EKAAGEPLAEWERDLLDTDKKDETPAEAEVQTSAETEKVA 280 >gi|464713|sp|P34831|RS2_SPIPL RecName: Full=30S ribosomal protein S2 gi|296030|emb|CAA37700.1| ribosomal protein S2 [Arthrospira platensis] gi|227458|prf||1704175A ribosomal protein S2 Length = 251 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 118/254 (46%), Positives = 163/254 (64%), Gaps = 4/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R +L++GV FGH+ WNPKM+ YIF RN HI++L +T+P+ AL ++ Sbjct: 1 MPSVTMRDMLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIVNLEKTLPLFNDALGFVNKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK A V E A R V+ +WLGGM+TNWKT+ QSI++ RDLE Sbjct: 61 ASSNNTILFVGTKRAAQKAVAEEATRCGMPYVDHRWLGGMLTNWKTIRQSIKRFRDLEAQ 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N TKKE L R+ +KL+R++ GI+DMGGLPD +FV+D + E +A+QEAR+L Sbjct: 121 ANDGTFDKLTKKEALMRRREMEKLERSIGGIKDMGGLPDALFVIDVDHEDIAVQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTNSNPD VDY IPGNDD+ R+I L+ VA A I+G RQ++ A Sbjct: 181 IPVIAVVDTNSNPDGVDYFIPGNDDAIRAIQLYVGAVADAIIEG--RQYAATQAP-GGDS 237 Query: 242 ETVVHSKEGMQLEE 255 + V +E + + Sbjct: 238 DGFVEVEEAGEAQA 251 >gi|83942429|ref|ZP_00954890.1| 30S ribosomal protein S2 [Sulfitobacter sp. EE-36] gi|83846522|gb|EAP84398.1| 30S ribosomal protein S2 [Sulfitobacter sp. EE-36] Length = 289 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 140/274 (51%), Positives = 193/274 (70%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQVI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GG ILFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVS+SIQ+L+ ++ Sbjct: 61 DTVAKGGSILFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSKSIQRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LA+ EA +L Sbjct: 121 EQSERGFSGLTKKERLGMERDQAKLEASLGGIREMGGRPDLIFVIDVKKEALAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AVVDTN +PD +DY+IPGNDD++R+I ++CDL A AA+DG++ Q G D + Sbjct: 181 GIPVIAVVDTNCSPDGIDYIIPGNDDAARAIHMYCDLAARAALDGMSAQLGAAGVDIGAM 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 E E +SE +V + P Sbjct: 241 EEAPEEEALIDGGVEVGNASEETVSNDAMAKDAP 274 >gi|261419449|ref|YP_003253131.1| 30S ribosomal protein S2 [Geobacillus sp. Y412MC61] gi|261375906|gb|ACX78649.1| ribosomal protein S2 [Geobacillus sp. Y412MC61] Length = 235 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVEKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 61 AANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|332186190|ref|ZP_08387936.1| ribosomal protein S2 [Sphingomonas sp. S17] gi|332014005|gb|EGI56064.1| ribosomal protein S2 [Sphingomonas sp. S17] Length = 269 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 137/264 (51%), Positives = 187/264 (70%), Gaps = 1/264 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNPKM+ YIF +RN HI+DLSQTVP+ +AL+ IS Sbjct: 1 MAAPVVTMQQLVETGAHFGHQTHRWNPKMKPYIFGDRNGVHILDLSQTVPLFARALEFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA + V EAA+R+ Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 STVAGGGKVLFVGTKRQAQEPVAEAARRAGQHFVNHRWLGGMLTNWKTISNSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN+ R+RDKL+ +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTHGLTKKEVLNLTRERDKLELSLGGIRDMGGVPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD+SR+I L+C+ VA AA G Q GAD + Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCEAVAIAATRGNNEQQRRSGADFGAM 240 Query: 241 GETVVHSK-EGMQLEEDSQSSESS 263 E V E Q+ E+ Sbjct: 241 AEPPVEEALTVAPTETAEQAVEAE 264 >gi|282855673|ref|ZP_06264982.1| ribosomal protein S2 [Pyramidobacter piscolens W5455] gi|282586473|gb|EFB91732.1| ribosomal protein S2 [Pyramidobacter piscolens W5455] Length = 271 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 112/268 (41%), Positives = 171/268 (63%), Gaps = 14/268 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L+KA + Sbjct: 1 MSVVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVKGLEKAYDFVRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG +LFV TK QA D + E A+R Q+ +N +WLGG+MTN+ T+ + +Q++ +LE+ Sbjct: 61 AKDGGSVLFVGTKRQAQDTIREEAQRCGQFYINQRWLGGLMTNFATIRKRVQRMIELEKH 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + G +TKKE ++ KL++ L GI+DM LPD +FV+D RE +A+ EAR+L Sbjct: 121 EADNDWGDYTKKEISLFRKELAKLEKYLLGIKDMRALPDALFVIDPRRENIAVMEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P++++VDTN +P+++DY IPGNDD+ R+I L C L+A+A I+G G Sbjct: 181 VPVISIVDTNCDPEMIDYPIPGNDDAIRAIKLICGLMANAVIEGRG-------------G 227 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 E S + E++ +S++S+LD +E Sbjct: 228 EDGAVSDAQLPDVEEAAASDASILDMKE 255 >gi|323340806|ref|ZP_08081058.1| 30S ribosomal protein S2 [Lactobacillus ruminis ATCC 25644] gi|323091929|gb|EFZ34549.1| 30S ribosomal protein S2 [Lactobacillus ruminis ATCC 25644] Length = 264 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 106/268 (39%), Positives = 168/268 (62%), Gaps = 14/268 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+++IF ERN +IIDL +TV ++ +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKQFIFTERNGIYIIDLQKTVKLIDEAYDFVKDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK QA D V E AKR QY VN +WLGG +TNW T+ I++L++++ + Sbjct: 61 ASNDGVVLFVGTKKQAQDAVEEEAKRCGQYYVNHRWLGGTLTNWNTIQTRIKRLKEIKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++RD+L++ L GI DM +PD++F+VD +E++A++EA++L Sbjct: 121 EEDGTFERLPKKEVALLVKQRDRLQKFLGGIEDMPRIPDILFIVDPRKERIAVKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G G Sbjct: 181 IPIVAMVDTNADPDEIDVKIPSNDDAIRAVRLITAKMADAVIEGRQ-------------G 227 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 E +E + E++S S +++ E Sbjct: 228 EDEAPVEEAFKAEDESVDSIEDIVEAVE 255 >gi|188581286|ref|YP_001924731.1| 30S ribosomal protein S2 [Methylobacterium populi BJ001] gi|209573667|sp|B1ZLB5|RS2_METPB RecName: Full=30S ribosomal protein S2 gi|179344784|gb|ACB80196.1| ribosomal protein S2 [Methylobacterium populi BJ001] Length = 354 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 155/276 (56%), Positives = 205/276 (74%), Gaps = 3/276 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ F++RQLLE+G FGH++ WNPKM+ YIF RNN HIIDL+QTVP L ALQ +S Sbjct: 1 MAV-DFSMRQLLEAGAHFGHQSHRWNPKMQPYIFGTRNNIHIIDLAQTVPALHAALQAVS 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA+D + EAAKRSAQY VNS+WLGGM+TNWKT+S SIQ+LR ++ Sbjct: 60 DTVARGGRVLFVGTKRQAADAIAEAAKRSAQYYVNSRWLGGMLTNWKTISGSIQRLRKVD 119 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L G TKKERL + R+++KL++AL GI+DMGG+PDL+FV+DTN+E+LAI+EA+RL Sbjct: 120 ETLEGGAVGLTKKERLMLTREKEKLEKALGGIKDMGGVPDLLFVIDTNKEQLAIKEAQRL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTN NPD + Y++P NDD+ R+IAL+CDL+A AAI+GI R +G D ++ Sbjct: 180 GIPVAAIVDTNCNPDGISYIVPANDDAGRAIALYCDLIARAAIEGIGRGQGALGIDVGAS 239 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 E E ++ S S + +VA + E Sbjct: 240 EEPTAE--ELPANDDVVASVASDAIAPADVAALAES 273 >gi|115378600|ref|ZP_01465753.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] gi|310823277|ref|YP_003955635.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] gi|115364387|gb|EAU63469.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] gi|309396349|gb|ADO73808.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1] Length = 333 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 112/238 (47%), Positives = 161/238 (67%), Gaps = 1/238 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV M + A + ++D +R Sbjct: 38 ITMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVVMARSAFRFVADITSR 97 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D + E A R+ Q+ V S+WLGG +TN+KT+ Q I +L+ LE++ + Sbjct: 98 GGSVLFVGTKKQAQDVIREEAARAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMSED 157 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE ++ER+R+KL++ L G+++M LP +FV+D +E +AI EA RL IP+ Sbjct: 158 GTFERLPKKEVASLEREREKLEKNLGGVKEMAKLPRCVFVIDPKKEHIAIHEATRLGIPV 217 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 + VVDTN +PD +D+VIPGNDD+ RSI LF +A A ++G AR + AD E Sbjct: 218 IGVVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIADACLEGAARYRASGAADRDEQEE 275 >gi|254422433|ref|ZP_05036151.1| ribosomal protein S2 [Synechococcus sp. PCC 7335] gi|196189922|gb|EDX84886.1| ribosomal protein S2 [Synechococcus sp. PCC 7335] Length = 273 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 157/271 (57%), Gaps = 2/271 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LLESGV FGH+ WNPKM+ YIF RN HIIDL QT +L++A Q + + Sbjct: 1 MPVVSLSDLLESGVHFGHQTRRWNPKMDEYIFTSRNGVHIIDLVQTATLLEEAYQYVLKS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA+ V + A R Y VN +WLGGM+TNW T+ + +L+DLE + Sbjct: 61 AESGKSFLFVGTKRQAAGIVAQEASRCGSYYVNQRWLGGMLTNWSTIKTRVDRLKDLERM 120 Query: 123 LNKENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ DKL++ L GI+ M +PD + +VD RE A+QE ++L Sbjct: 121 EQSGALAMRPKKEGSMLRRELDKLQKYLGGIKTMRRIPDAVIIVDVRREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA- 240 +PI++++DTN +PD+VD IPGNDD+ R+I L +A A +G ++ G+ T SA Sbjct: 181 LPIISLLDTNCDPDVVDVPIPGNDDAIRAIKLVIGRLADAIYEGSTGGNTASGSGTASAH 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 + +G ++ + ++ D A Sbjct: 241 AADIYDGYDGADYNDEGEELNANAADEAPSA 271 >gi|197119129|ref|YP_002139556.1| 30S ribosomal protein S2 [Geobacter bemidjiensis Bem] gi|238690890|sp|B5EHW1|RS2_GEOBB RecName: Full=30S ribosomal protein S2 gi|197088489|gb|ACH39760.1| ribosomal protein S2 [Geobacter bemidjiensis Bem] Length = 255 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 104/236 (44%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A ++D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R Q+ VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQAGETVLFVGTKKQAQDSVAEEAQRCGQFYVNDRWLGGMLTNFATVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE+L + ++R+KL++ L GI+ MG +P ++FVVD E++A+ EA++L Sbjct: 121 IADGTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+VA+VDTN +PD ++YVIPGNDD+ R+I L +A A ++G +++ + Sbjct: 181 IPVVAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGGQARNARLQTGA 236 >gi|145593873|ref|YP_001158170.1| ribosomal protein S2 [Salinispora tropica CNB-440] gi|189044998|sp|A4X4J2|RS2_SALTO RecName: Full=30S ribosomal protein S2 gi|145303210|gb|ABP53792.1| SSU ribosomal protein S2P [Salinispora tropica CNB-440] Length = 295 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 130/273 (47%), Positives = 176/273 (64%), Gaps = 7/273 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRGT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L Sbjct: 61 VAEGGSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEAL 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+ G+TKKE L + R++ KL R L G+RDM LP ++VVDT +E +A+ EAR+L Sbjct: 121 GDLSGTAAGYTKKETLQLNREKGKLSRTLGGLRDMQKLPAAIWVVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP++AV+DTN +PD VDY IPGNDD+ RS L +VA+A DG IAR G D K Sbjct: 181 GIPVIAVLDTNCDPDEVDYPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRRRGTDEKP 240 Query: 240 ----AGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 A + + E LEE +S E + Sbjct: 241 EAGVATDEPLAEWERELLEEPKKSDEQPAKSDE 273 >gi|146297357|ref|YP_001181128.1| ribosomal protein S2 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166225252|sp|A4XM02|RS2_CALS8 RecName: Full=30S ribosomal protein S2 gi|145410933|gb|ABP67937.1| SSU ribosomal protein S2P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 258 Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats. Identities = 102/254 (40%), Positives = 164/254 (64%), Gaps = 5/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA + + E A+R Y +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VQEGKIILFVGTKKQAQETIKEEAERCGMYYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + ++ K Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEGKEGEQFAPASEQK--- 237 Query: 242 ETVVHSKEGMQLEE 255 V ++E ++E+ Sbjct: 238 -EEVKTQEVQEVED 250 >gi|146277550|ref|YP_001167709.1| 30S ribosomal protein S2 [Rhodobacter sphaeroides ATCC 17025] gi|145555791|gb|ABP70404.1| SSU ribosomal protein S2P [Rhodobacter sphaeroides ATCC 17025] Length = 274 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 143/253 (56%), Positives = 198/253 (78%), Gaps = 2/253 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 24 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 83 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L++L+ Sbjct: 84 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKNLD 143 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 144 ELLAHGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLIFIIDVGKEDLAIAEAQKL 203 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN++P VDY+IPGNDD++R+IAL+CDLV+ AA+DG++ Q G D + Sbjct: 204 GIPVVAVVDTNNSPKGVDYIIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGIDLGAL 263 Query: 241 GETVVHSKEGMQL 253 V +E ++ Sbjct: 264 D--VAPEEETLEA 274 >gi|282861388|ref|ZP_06270453.1| ribosomal protein S2 [Streptomyces sp. ACTE] gi|282564046|gb|EFB69583.1| ribosomal protein S2 [Streptomyces sp. ACTE] Length = 310 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 171/273 (62%), Gaps = 6/273 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELELI 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 K+AGE + + + E +E E Sbjct: 241 EKAAGEPLAEWERDLLEGEKKDDAEVQSSVETE 273 >gi|209573693|sp|A4WSP0|RS2_RHOS5 RecName: Full=30S ribosomal protein S2 Length = 253 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 143/253 (56%), Positives = 198/253 (78%), Gaps = 2/253 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV +GH+ WNPKM +I+ +RN HI+DL+QTVPML +AL+V+ Sbjct: 3 MALPEFSMRQLLEAGVHYGHQTARWNPKMAEFIYGDRNGIHIVDLTQTVPMLDQALKVVR 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA + EAA++ AQ+ +N +WLGG +TNWKTVSQSIQ+L++L+ Sbjct: 63 DTVAKGGRILFVGTKRQAQKPIAEAAEKCAQHYMNHRWLGGTLTNWKTVSQSIQRLKNLD 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ELL +G TKKERLN+ER++ KL+ +L GIR+MGG PDL+F++D +E LAI EA++L Sbjct: 123 ELLAHGAEGLTKKERLNMEREQQKLQASLGGIREMGGTPDLIFIIDVGKEDLAIAEAQKL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN++P VDY+IPGNDD++R+IAL+CDLV+ AA+DG++ Q G D + Sbjct: 183 GIPVVAVVDTNNSPKGVDYIIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGIDLGAL 242 Query: 241 GETVVHSKEGMQL 253 V +E ++ Sbjct: 243 D--VAPEEETLEA 253 >gi|300783892|ref|YP_003764183.1| 30S ribosomal protein S2 [Amycolatopsis mediterranei U32] gi|299793406|gb|ADJ43781.1| small subunit ribosomal protein S2 [Amycolatopsis mediterranei U32] Length = 291 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 118/256 (46%), Positives = 168/256 (65%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + I +T Sbjct: 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQQTLTYIDRAYEFIKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + A R VN +WLGGM+TN++TV + + +L++LE Sbjct: 61 VAHGGTIMFVGTKKQAQEAIANEAARVGMPYVNQRWLGGMLTNFQTVHKRLLRLKELEAR 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TK+E L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 EQTGGFEGLTKREILTLTREKDKLEKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA AA G+ ++ S GA S Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMQRSSRNGASADSKP 240 Query: 242 ETVVHSKEGMQLEEDS 257 E V + E + E Sbjct: 241 EPGVAADEPLAEWEKE 256 >gi|222529800|ref|YP_002573682.1| 30S ribosomal protein S2 [Caldicellulosiruptor bescii DSM 6725] gi|254764451|sp|B9MKQ1|RS2_ANATD RecName: Full=30S ribosomal protein S2 gi|222456647|gb|ACM60909.1| ribosomal protein S2 [Caldicellulosiruptor bescii DSM 6725] Length = 257 Score = 331 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 99/257 (38%), Positives = 161/257 (62%), Gaps = 1/257 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEGREGEQFTPATTSSQEV 240 Query: 242 ETVVHSKEGMQLEEDSQ 258 + E + D + Sbjct: 241 DKASEQVEIAADDIDEE 257 >gi|42519372|ref|NP_965302.1| 30S ribosomal protein S2 [Lactobacillus johnsonii NCC 533] gi|227890237|ref|ZP_04008042.1| 30S ribosomal protein S2 [Lactobacillus johnsonii ATCC 33200] gi|61215652|sp|Q74IR7|RS2_LACJO RecName: Full=30S ribosomal protein S2 gi|41583660|gb|AAS09268.1| 30S ribosomal protein S2 [Lactobacillus johnsonii NCC 533] gi|227849239|gb|EEJ59325.1| 30S ribosomal protein S2 [Lactobacillus johnsonii ATCC 33200] gi|329667109|gb|AEB93057.1| 30S ribosomal protein S2 [Lactobacillus johnsonii DPC 6026] Length = 261 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 109/260 (41%), Positives = 157/260 (60%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + Sbjct: 1 MTVVTMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L++L+++ Sbjct: 61 AQDGGVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKELKQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L Sbjct: 121 SEDGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A Sbjct: 181 IPVVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSEDVEKEMAD 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 + E +E + SE Sbjct: 241 KAAAEDDEEESIEVVVEKSE 260 >gi|312793069|ref|YP_004025992.1| 30S ribosomal protein S2 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876741|ref|ZP_07736720.1| ribosomal protein S2 [Caldicellulosiruptor lactoaceticus 6A] gi|311796472|gb|EFR12822.1| ribosomal protein S2 [Caldicellulosiruptor lactoaceticus 6A] gi|312180209|gb|ADQ40379.1| ribosomal protein S2 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 258 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 98/248 (39%), Positives = 158/248 (63%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEGREGEQFTPATTSSQEA 240 Query: 242 ETVVHSKE 249 + + E Sbjct: 241 DKEIEQAE 248 >gi|312621975|ref|YP_004023588.1| 30S ribosomal protein S2 [Caldicellulosiruptor kronotskyensis 2002] gi|312202442|gb|ADQ45769.1| ribosomal protein S2 [Caldicellulosiruptor kronotskyensis 2002] Length = 258 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 100/248 (40%), Positives = 159/248 (64%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + T Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEGREGEQFTPATATSQEA 240 Query: 242 ETVVHSKE 249 + V E Sbjct: 241 DKEVEQAE 248 >gi|329850616|ref|ZP_08265461.1| ribosomal protein S2 [Asticcacaulis biprosthecum C19] gi|328840931|gb|EGF90502.1| ribosomal protein S2 [Asticcacaulis biprosthecum C19] Length = 266 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 130/240 (54%), Positives = 180/240 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+ ++R LLE+G FGH+ WNPKMERY+F R+N HIIDLSQT+P+ +AL Sbjct: 1 MAMPEISMRLLLEAGAHFGHQTHRWNPKMERYLFGARSNIHIIDLSQTLPLFHQALLKAR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QA V AAKRSAQY VN +WLGG +TNW+T+S SI +LR+LE Sbjct: 61 EVAAAGGRVLFVGTKRQAQGPVAVAAKRSAQYYVNHRWLGGTLTNWRTISGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L+ G +KKE L + R+R+KL+ +L GI+DMGG+PDLMFV+DTN+E +AIQEAR+L Sbjct: 121 NVLDSNPAGRSKKELLTLTREREKLELSLGGIKDMGGIPDLMFVIDTNKESIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++ ++D+NS+PD + Y +PGNDD++R++ L+CDL+A A +DG+A G D +A Sbjct: 181 NIPVIGILDSNSDPDGITYPVPGNDDAARALQLYCDLIADAVLDGLAAGQVASGVDLGAA 240 >gi|134299825|ref|YP_001113321.1| 30S ribosomal protein S2 [Desulfotomaculum reducens MI-1] gi|172044310|sp|A4J5Z3|RS2_DESRM RecName: Full=30S ribosomal protein S2 gi|134052525|gb|ABO50496.1| SSU ribosomal protein S2P [Desulfotomaculum reducens MI-1] Length = 232 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 97/229 (42%), Positives = 148/229 (64%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++ + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEECYDFVKQL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG +LFV TK QA + V E A+R + VN +WLGGM+TN++T+ I +L +LE + Sbjct: 61 AGEGGTLLFVGTKKQAQEAVKEEAERCGMFFVNQRWLGGMLTNFQTIRNRIDRLHELERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++KL + L GI++M LP +FV+D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVAQLLHEKEKLDKFLGGIKNMRRLPGALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKIADAILEGKQGEQ 229 >gi|91977327|ref|YP_569986.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris BisB5] gi|123735355|sp|Q136A4|RS2_RHOPS RecName: Full=30S ribosomal protein S2 gi|91683783|gb|ABE40085.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris BisB5] Length = 331 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 152/254 (59%), Positives = 198/254 (77%), Gaps = 1/254 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP++ +ALQ IS Sbjct: 1 MAIPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLMHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLNSGDASAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+IAL+CDL+A A IDGI+R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLIARAVIDGISRAQGDSGIDIGA 240 Query: 240 AGETVVHSKEGMQL 253 A + Q Sbjct: 241 ASRPLREDLPAAQA 254 >gi|294677358|ref|YP_003577973.1| 30S ribosomal protein S2 [Rhodobacter capsulatus SB 1003] gi|294476178|gb|ADE85566.1| 30S ribosomal protein S2 [Rhodobacter capsulatus SB 1003] Length = 251 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 141/251 (56%), Positives = 191/251 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV +GH+ WNP+M +I+ ERN HIIDL+QTVPML AL V+ Sbjct: 1 MALPDFSLRQLLEAGVHYGHQTQRWNPRMAEFIYGERNGIHIIDLTQTVPMLDAALNVVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ V +AA++ AQY +N +WLGG +TNWKTVSQSI +L+ ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAKAVADAAEKCAQYYMNHRWLGGTLTNWKTVSQSIARLKQID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E++ +G TKKERL +ER++ KL+ +L GIR+MGGLPDL+FV+D ++E LAI EA++L Sbjct: 121 EIMASGAEGLTKKERLGMEREQAKLQASLGGIREMGGLPDLLFVIDVSKEDLAILEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +P VDY+IPGNDD++R+IAL+CDLV+ AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPKGVDYIIPGNDDAARAIALYCDLVSRAALDGMSAQMGAAGVDLGAL 240 Query: 241 GETVVHSKEGM 251 E V Sbjct: 241 EEAPVEDVAEA 251 >gi|268319251|ref|YP_003292907.1| ribosomal protein S2 [Lactobacillus johnsonii FI9785] gi|262397626|emb|CAX66640.1| ribosomal protein S2 [Lactobacillus johnsonii FI9785] Length = 261 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 109/260 (41%), Positives = 157/260 (60%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + Sbjct: 1 MTVVTMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V E A R+ QY VN +WLGG +TNW T+ +++L++L+++ Sbjct: 61 AQDGGVFLFVGTKKQAQDAVKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKELKQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +KL+R L GI DM +PD+MFVVD +EK+A+ EA L Sbjct: 121 SEDGTFDVLPKKEVALLTKEMEKLERFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G Q + + A Sbjct: 181 IPVVAMVDTNTDPDPIDVVIPANDDAIRAIRLISGAMADAIIEGKQGQDDSENVEKEMAD 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 + E +E + SE Sbjct: 241 KAAAEDDEEESIEVVVEKSE 260 >gi|320008279|gb|ADW03129.1| ribosomal protein S2 [Streptomyces flavogriseus ATCC 33331] Length = 306 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 115/281 (40%), Positives = 173/281 (61%), Gaps = 10/281 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELELI 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSKPG 240 Query: 237 TKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 K+AGE + + + + +E EV E Sbjct: 241 EKAAGEPLAEWERDLLAGDKKADAEG----TDEVQSSAETE 277 >gi|85708120|ref|ZP_01039186.1| ribosomal protein S2 [Erythrobacter sp. NAP1] gi|85689654|gb|EAQ29657.1| ribosomal protein S2 [Erythrobacter sp. NAP1] Length = 256 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 125/256 (48%), Positives = 176/256 (68%), Gaps = 1/256 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP+ +AL + Sbjct: 1 MAATTVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGNRNGVHIIDLSQTVPLFARALDFVE 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + EAA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 QTVRAGGKVLFVGTKRQAQEPIAEAARQSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+RDKL+ +L GIRDMGG+PD+MFV+D N+E LAI+EA L Sbjct: 121 EQLSGDTSGFTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEDLAIKEAAVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AV+DTN +P + + +PGNDD+SR++ L+C ++ AA G + G D ++ Sbjct: 181 GIPVIAVLDTNVDPTGIAFPVPGNDDASRAVRLYCQAISDAANAGRGQAVEQSGEDFGAS 240 Query: 241 GETVVH-SKEGMQLEE 255 + E E Sbjct: 241 ETPPAEPTAEEAPAEA 256 >gi|256832236|ref|YP_003160963.1| 30S ribosomal protein S2 [Jonesia denitrificans DSM 20603] gi|256685767|gb|ACV08660.1| ribosomal protein S2 [Jonesia denitrificans DSM 20603] Length = 283 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 119/252 (47%), Positives = 172/252 (68%), Gaps = 2/252 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL++GV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A + + +T Sbjct: 1 MAVVTMRQLLDAGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG +LFV TK QA + V E A R VN +WLGGM+TN++TV++ +Q+L++LE++ Sbjct: 61 VARGGSVLFVGTKKQAQEPVAEQASRVGMPYVNHRWLGGMLTNFQTVNKRLQRLKELEQI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R++DKL R L G+RDM LP ++VVDTN+E LA+ EAR+L Sbjct: 121 DFDDVAGSVYTKKELLIMRREKDKLARTLGGLRDMSRLPSALWVVDTNKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ R++AL +VA A +G+ + AD + Sbjct: 181 GIPVVAILDTNCDPDHVDYKIPGNDDAIRAVALLTRVVADAVAEGLVARSKGGKADAEPL 240 Query: 241 GETVVHSKEGMQ 252 E EG Q Sbjct: 241 AEWERELLEGGQ 252 >gi|119511269|ref|ZP_01630384.1| 30S ribosomal protein S2 [Nodularia spumigena CCY9414] gi|119464060|gb|EAW44982.1| 30S ribosomal protein S2 [Nodularia spumigena CCY9414] Length = 263 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 100/270 (37%), Positives = 150/270 (55%), Gaps = 10/270 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAQLMDNAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ +L+DLE Sbjct: 61 SEQGKKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRADRLKDLERR 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE ++L Sbjct: 121 EENGALDLLPKKEASMLRREMTKLQKYLGGIKNMRKVPDVVVIVDQRREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +PIV+++DTN +PD+VD IP NDD+ RSI L +A A +G G Sbjct: 181 LPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEGRGGTLE---------G 231 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 E +G + ++D SE + E + Sbjct: 232 EDDYEDYDGSEYDDDYDESEYAQGSSDESS 261 >gi|86749945|ref|YP_486441.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris HaA2] gi|123004092|sp|Q2IW80|RS2_RHOP2 RecName: Full=30S ribosomal protein S2 gi|86572973|gb|ABD07530.1| SSU ribosomal protein S2P [Rhodopseudomonas palustris HaA2] Length = 331 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 151/254 (59%), Positives = 197/254 (77%), Gaps = 1/254 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH++ WNPKM YIF RNN HIIDL+QTVP++ +ALQ IS Sbjct: 1 MALPEFTMRQLLEAGVHFGHQSHRWNPKMAEYIFGARNNIHIIDLAQTVPLMHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR L+ Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIKRLRHLD 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++LN + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLNSGDASAYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+I+L+CDL+A A IDGI+R G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAISLYCDLIARAVIDGISRAQGESGIDIGA 240 Query: 240 AGETVVHSKEGMQL 253 + Q Sbjct: 241 SSRPPREDLPAAQA 254 >gi|254392084|ref|ZP_05007273.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|294815386|ref|ZP_06774029.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|326443738|ref|ZP_08218472.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|197705760|gb|EDY51572.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] gi|294327985|gb|EFG09628.1| 30S ribosomal protein S2 [Streptomyces clavuligerus ATCC 27064] Length = 302 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 115/265 (43%), Positives = 174/265 (65%), Gaps = 7/265 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--- 237 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D+ Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDSKPG 240 Query: 238 -KSAGETVVHSKEGMQLEEDSQSSE 261 K+AGE + + + LE D ++ E Sbjct: 241 DKAAGEPLAEWERDL-LEGDKKADE 264 >gi|145224713|ref|YP_001135391.1| 30S ribosomal protein S2 [Mycobacterium gilvum PYR-GCK] gi|315445043|ref|YP_004077922.1| 30S ribosomal protein S2P [Mycobacterium sp. Spyr1] gi|189044945|sp|A4TC67|RS2_MYCGI RecName: Full=30S ribosomal protein S2 gi|145217199|gb|ABP46603.1| SSU ribosomal protein S2P [Mycobacterium gilvum PYR-GCK] gi|315263346|gb|ADU00088.1| SSU ribosomal protein S2P [Mycobacterium sp. Spyr1] Length = 279 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 115/255 (45%), Positives = 175/255 (68%), Gaps = 2/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + A + + +T Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDSAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + + A R VN +WLGGM+TN++TV + +Q++++LE + Sbjct: 61 VAHGGSIMFVGTKKQAQESIAQEATRVGMPYVNQRWLGGMLTNFQTVHKRLQRMKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E LA+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHLAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A++DTN +PD+VDY IPGNDD+ RS AL ++ASA +G+ + + GAD AG Sbjct: 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVIASAVAEGLQAR-AGAGADKAEAG 239 Query: 242 ETVVHSKEGMQLEED 256 + ++ + E++ Sbjct: 240 QDGAAAEPLAEWEQE 254 >gi|302537206|ref|ZP_07289548.1| ribosomal protein S2 [Streptomyces sp. C] gi|302446101|gb|EFL17917.1| ribosomal protein S2 [Streptomyces sp. C] Length = 292 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 113/263 (42%), Positives = 169/263 (64%), Gaps = 6/263 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + Sbjct: 1 MAMAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 ETVAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELE 120 Query: 121 --ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR Sbjct: 121 AIDFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEAR 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD-- 236 +L IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 KLHIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSK 240 Query: 237 --TKSAGETVVHSKEGMQLEEDS 257 K+A E + + + E Sbjct: 241 PGEKAAAEPLAEWERDLLEGEKK 263 >gi|297559218|ref|YP_003678192.1| ribosomal protein S2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843666|gb|ADH65686.1| ribosomal protein S2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 314 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 173/257 (67%), Gaps = 3/257 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 TIRQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + + TVA Sbjct: 5 VTIRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLAYIDRAYEFVKQTVAH 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV TK QA + + E A+R VN +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 65 GGTVLFVGTKKQAQEAIDEQARRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEEIDFD 124 Query: 126 ENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G TKKE LN+ R+++KL+R L GIRDM +P +++VDT +E +AI EAR+L IP Sbjct: 125 DVAGSSLTKKELLNLRREKEKLERTLGGIRDMSRVPSAVWIVDTKKEHIAISEARKLNIP 184 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSAGE 242 +VA++DTN +PD VDY IPGNDD+ RS++L +VA A DG +AR + + + + E Sbjct: 185 VVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVVADAVADGLMARSGASEASGERKSAE 244 Query: 243 TVVHSKEGMQLEEDSQS 259 + E LE + S Sbjct: 245 EPLAEWERELLEGKADS 261 >gi|239826643|ref|YP_002949267.1| 30S ribosomal protein S2 [Geobacillus sp. WCH70] gi|259495216|sp|C5D9B5|RS2_GEOSW RecName: Full=30S ribosomal protein S2 gi|239806936|gb|ACS24001.1| ribosomal protein S2 [Geobacillus sp. WCH70] Length = 235 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKMEEAYNFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++L+++E++ Sbjct: 61 AANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLKEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I++++++L++ L GI++M LPD +FV+D +E++A+ EAR+L Sbjct: 121 AEDGTFDVLPKKEVIRIKKEQERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAVVAAE 235 >gi|302872262|ref|YP_003840898.1| ribosomal protein S2 [Caldicellulosiruptor obsidiansis OB47] gi|302575121|gb|ADL42912.1| ribosomal protein S2 [Caldicellulosiruptor obsidiansis OB47] Length = 258 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 98/248 (39%), Positives = 157/248 (63%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEGREGEQFTPANTSSQEA 240 Query: 242 ETVVHSKE 249 + E Sbjct: 241 DKASEQVE 248 >gi|260662310|ref|ZP_05863206.1| 30S ribosomal protein S2 [Lactobacillus fermentum 28-3-CHN] gi|260553693|gb|EEX26585.1| 30S ribosomal protein S2 [Lactobacillus fermentum 28-3-CHN] Length = 259 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 109/251 (43%), Positives = 165/251 (65%), Gaps = 3/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV M+ A + D Sbjct: 1 MPVVSMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKMIDTAYNYVKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRISRLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD++++VD ++E++A++EA++L Sbjct: 121 AEDGTFDRLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLYIVDPHKEQIAVKEAQKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + A + Sbjct: 181 IPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITAKMADAVIEGKQGEDDQQVAPAEDVA 240 Query: 242 ETVVHSKEGMQ 252 E V S E +Q Sbjct: 241 EEV--SDESLQ 249 >gi|332670028|ref|YP_004453036.1| 30S ribosomal protein S2 [Cellulomonas fimi ATCC 484] gi|332339066|gb|AEE45649.1| ribosomal protein S2 [Cellulomonas fimi ATCC 484] Length = 322 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 116/231 (50%), Positives = 163/231 (70%), Gaps = 2/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A +S T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYDFVSQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILFV TK QA + V E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGSILFVGTKKQAQEPVAEQAARVGMPYVNQRWLGGMLTNFTTVHKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL + L GIRDM +P +++VDTN+E LA+ EAR+L Sbjct: 121 DFDDVAASGLTKKELLVLRREKDKLSKTLGGIRDMAKVPSAVWIVDTNKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+VA++DTN +PD+VDY IPGNDD+ R++ L ++A AA DG+ ++HS Sbjct: 181 GIPVVAILDTNCDPDVVDYPIPGNDDAIRAVQLLTRVIADAAADGLLKRHS 231 >gi|313813388|gb|EFS51102.1| ribosomal protein S2 [Propionibacterium acnes HL025PA1] Length = 283 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 120/283 (42%), Positives = 180/283 (63%), Gaps = 11/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A A +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAVAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 241 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---APEAE 280 >gi|103487444|ref|YP_617005.1| 30S ribosomal protein S2 [Sphingopyxis alaskensis RB2256] gi|123379689|sp|Q1GRQ0|RS2_SPHAL RecName: Full=30S ribosomal protein S2 gi|98977521|gb|ABF53672.1| SSU ribosomal protein S2P [Sphingopyxis alaskensis RB2256] Length = 277 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 134/278 (48%), Positives = 185/278 (66%), Gaps = 3/278 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++ L+E+G FGH+ WNP+M+ YIF RN HI+DLSQTVP+ +AL I+ Sbjct: 1 MAAPVVTMQNLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHILDLSQTVPLFARALDFIA 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T A GG++LFV TK QA + +AA+ S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 STAASGGKVLFVGTKRQAQGPIADAARASGQHFVNHRWLGGMLTNWKTISNSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN R+RDKL+ +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTSGLTKKEVLNKTRERDKLEMSLGGIRDMGGIPDVMFVIDANKEELAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD++R+I L+CD VA AA G + + G D +A Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDAARAIRLYCDAVAQAATRGGQQARADRGEDLGAA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E V E +EE + E A E S Sbjct: 241 VEPVA---EPALVEEAAAPVTEDEQVPAEAAAETERQS 275 >gi|325290377|ref|YP_004266558.1| SSU ribosomal protein S2P [Syntrophobotulus glycolicus DSM 8271] gi|324965778|gb|ADY56557.1| SSU ribosomal protein S2P [Syntrophobotulus glycolicus DSM 8271] Length = 266 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + D Sbjct: 24 TMAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVDEAYNFVRD 83 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + GG +LFV TK QA + V E A+R Y VN +WLGGM+TN++T+ + +Q+LR+LE+ Sbjct: 84 FSSNGGTVLFVGTKKQAQESVKEEAERCGMYFVNERWLGGMLTNFQTIQKRVQRLRELEK 143 Query: 122 LLNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + + KKE + + KL+R L GI++M LPD++FVVD +E++A+ EARRL Sbjct: 144 MEQEGVFEVLPKKEVAALRHEMGKLERFLGGIKEMKKLPDVLFVVDPRKERIAVAEARRL 203 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 204 NIPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTAKIADAIIEGQQ 250 >gi|297156860|gb|ADI06572.1| 30S ribosomal protein S2 [Streptomyces bingchenggensis BCW-1] Length = 320 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 114/267 (42%), Positives = 176/267 (65%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--- 237 RIP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 RIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDEKAG 240 Query: 238 KSAGETVVH-SKEGMQLEEDSQSSESS 263 K+AGE + ++ ++ E+ + E++ Sbjct: 241 KAAGEPLAEWERDLLEGEKKADEPEAA 267 >gi|158313013|ref|YP_001505521.1| ribosomal protein S2 [Frankia sp. EAN1pec] gi|158108418|gb|ABW10615.1| ribosomal protein S2 [Frankia sp. EAN1pec] Length = 300 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 114/254 (44%), Positives = 169/254 (66%), Gaps = 2/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +T Sbjct: 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LF+ TK QA + + E A+R V +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 61 VAHGGTVLFIGTKKQAQEAIEEQAQRVGMPFVKERWLGGMLTNFSTVYKRLQRLKELEEI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L Sbjct: 121 ELTGGTEVRTKKEQLVLTREKAKLERTLGGIRDMARVPSAVWVVDTKKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA A +G+ + + ++ ++ Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAEGLMSR-AGASSNAEAKP 239 Query: 242 ETVVHSKEGMQLEE 255 E + + E+ Sbjct: 240 EQSTGEEPLAEWEQ 253 >gi|239928672|ref|ZP_04685625.1| 30S ribosomal protein S2 [Streptomyces ghanaensis ATCC 14672] gi|291436996|ref|ZP_06576386.1| 30S ribosomal protein S2 [Streptomyces ghanaensis ATCC 14672] gi|291339891|gb|EFE66847.1| 30S ribosomal protein S2 [Streptomyces ghanaensis ATCC 14672] Length = 293 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 112/262 (42%), Positives = 174/262 (66%), Gaps = 5/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVASSGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH--SYMGADTK 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + + G K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATEGKGEK 240 Query: 239 SAGETVVHSKEGMQLEEDSQSS 260 +AGE + + + LE + ++ Sbjct: 241 AAGEPLAEWERDL-LEGEKKAD 261 >gi|184155190|ref|YP_001843530.1| 30S ribosomal protein S2 [Lactobacillus fermentum IFO 3956] gi|227514721|ref|ZP_03944770.1| ribosomal protein S2 [Lactobacillus fermentum ATCC 14931] gi|238692963|sp|B2GBL8|RS2_LACF3 RecName: Full=30S ribosomal protein S2 gi|183226534|dbj|BAG27050.1| 30S ribosomal protein S2 [Lactobacillus fermentum IFO 3956] gi|227086925|gb|EEI22237.1| ribosomal protein S2 [Lactobacillus fermentum ATCC 14931] gi|299783099|gb|ADJ41097.1| 30S ribosomal protein S2 [Lactobacillus fermentum CECT 5716] Length = 259 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 109/251 (43%), Positives = 165/251 (65%), Gaps = 3/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM+ +IF ERN +IIDL +TV M+ A + D Sbjct: 1 MPVVSMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKMIDTAYNYVKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRISRLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD++++VD ++E++A++EA++L Sbjct: 121 AEDGTFDRLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLYIVDPHKEQIAVKEAQKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + A + Sbjct: 181 IPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITAKMADAVIEGKQGEDDQQVAPAEDVA 240 Query: 242 ETVVHSKEGMQ 252 E V S E +Q Sbjct: 241 EEV--SDESLQ 249 >gi|56419784|ref|YP_147102.1| 30S ribosomal protein S2 [Geobacillus kaustophilus HTA426] gi|61215361|sp|Q5L0K2|RS2_GEOKA RecName: Full=30S ribosomal protein S2 gi|56379626|dbj|BAD75534.1| 30S ribosomal protein S2 [Geobacillus kaustophilus HTA426] Length = 235 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++LR++E++ Sbjct: 61 AANGGKILFVGTKKQAQESVKEEAERCDMFYVNQRWLGGTLTNFATIQKRIKRLREIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + +++++++L++ L GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|148265753|ref|YP_001232459.1| 30S ribosomal protein S2 [Geobacter uraniireducens Rf4] gi|189044940|sp|A5G7W8|RS2_GEOUR RecName: Full=30S ribosomal protein S2 gi|146399253|gb|ABQ27886.1| SSU ribosomal protein S2P [Geobacter uraniireducens Rf4] Length = 256 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 108/236 (45%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + D Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKGAYNFVVDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R + VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQSGETMLFVGTKKQAQDSVSEEAQRCGMFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE L +E+ R KL++ L GI+ M LP ++FV+D E++A+ EA++L Sbjct: 121 VADGTIEAYTKKEALQMEKDRQKLEKTLGGIKGMNKLPGVLFVIDPKNEEIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+VA+VDTN +PD +DYVIPGNDD+ R+I L VA A I+G ++ + DT Sbjct: 181 IPVVAIVDTNCDPDDIDYVIPGNDDAIRAIRLLTSKVADAMIEGGQARNIKLQTDT 236 >gi|291533219|emb|CBL06332.1| SSU ribosomal protein S2P [Megamonas hypermegale ART12/1] Length = 243 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 104/243 (42%), Positives = 160/243 (65%), Gaps = 1/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYDFLRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA + V E A +S + VN +WLGGMMTN+ T+ +SI +L++LE + Sbjct: 61 AEEGKSILFVGTKKQAQEAVKEEALKSGMFYVNERWLGGMMTNFATIRKSINRLKELEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +KKE L ++R+++KL+++L GI+DM LP +F+VD +E++A+ EA++L Sbjct: 121 EEDGTFEVLSKKEVLALKREQEKLEKSLGGIKDMEELPGALFIVDPRKERIAVAEAKKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + + + ++ Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSRMADAVIEGRQGEAGEVVEEVATSE 240 Query: 242 ETV 244 + Sbjct: 241 DAE 243 >gi|220931609|ref|YP_002508517.1| ribosomal protein S2 [Halothermothrix orenii H 168] gi|254764480|sp|B8CW53|RS2_HALOH RecName: Full=30S ribosomal protein S2 gi|219992919|gb|ACL69522.1| ribosomal protein S2 [Halothermothrix orenii H 168] Length = 262 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 105/242 (43%), Positives = 160/242 (66%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESGV FGH+ WNPKM+ YIF ERN +IIDL +TV +L KA + D Sbjct: 1 MAVVTMKQLLESGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVALLDKAYDYVRDM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + + A+R VN +WLGGM+TN++T+ + +++L +LE++ Sbjct: 61 ASKGKTILFVGTKKQAQETIKTEAERCGMPYVNQRWLGGMLTNFRTIKKRVKRLNELEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++RDKL+R L GIRDM LPD++++ D +E +A+ EAR+L Sbjct: 121 EEDGLFEVLPKKEVILLKKERDKLERFLGGIRDMKNLPDVVYITDPRKESIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV++VDTN +PDL+DY+IPGNDD+ R++ L +A A + G + A + Sbjct: 181 IPIVSIVDTNCDPDLIDYIIPGNDDAIRAVKLISSKIADAVLAGKQGEQLTEEAKPEDKE 240 Query: 242 ET 243 + Sbjct: 241 DE 242 >gi|84501132|ref|ZP_00999367.1| 30S ribosomal protein S2 [Oceanicola batsensis HTCC2597] gi|84391199|gb|EAQ03617.1| 30S ribosomal protein S2 [Oceanicola batsensis HTCC2597] Length = 255 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 135/239 (56%), Positives = 185/239 (77%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL VI Sbjct: 1 MALPEFSMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIVDLTQTVPMLDQALNVIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA+ GR+LFV TK QAS + EAA++ AQY +N +WLGG +TNWKTVSQSI +L +++ Sbjct: 61 ETVAKNGRVLFVGTKRQASAPIAEAAEKCAQYYMNHRWLGGTLTNWKTVSQSINRLNEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ +G TKKERL +ER ++KL +L GIR+MGG+PDL+FV+D +E+LA+ EA +L Sbjct: 121 EKLSAGAEGLTKKERLGMERDQEKLTASLGGIREMGGVPDLLFVIDVKKEQLAVAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VAVVDTN +PD +DY+IPGNDD++R+I+L+CDL + AA+DG+ Q G D Sbjct: 181 GIPVVAVVDTNCSPDGIDYIIPGNDDAARAISLYCDLASRAALDGMTAQLGAAGVDVGE 239 >gi|329936705|ref|ZP_08286412.1| 30S ribosomal protein S2 (SSU) [Streptomyces griseoaurantiacus M045] gi|329303935|gb|EGG47818.1| 30S ribosomal protein S2 (SSU) [Streptomyces griseoaurantiacus M045] Length = 307 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 115/263 (43%), Positives = 174/263 (66%), Gaps = 4/263 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G IAR + K+ Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAENKGEKA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 AGE + + + LE + ++S Sbjct: 241 AGEPLAEWERDL-LEGGEKKADS 262 >gi|302554443|ref|ZP_07306785.1| ribosomal protein S2 [Streptomyces viridochromogenes DSM 40736] gi|302472061|gb|EFL35154.1| ribosomal protein S2 [Streptomyces viridochromogenes DSM 40736] Length = 310 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 112/262 (42%), Positives = 173/262 (66%), Gaps = 5/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH--SYMGADTK 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + + G K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSGVATEGKGEK 240 Query: 239 SAGETVVHSKEGMQLEEDSQSS 260 +AGE + + + LE + ++ Sbjct: 241 AAGEPLAEWERDL-LEGEKKAD 261 >gi|238063323|ref|ZP_04608032.1| 30S ribosomal protein S2 [Micromonospora sp. ATCC 39149] gi|237885134|gb|EEP73962.1| 30S ribosomal protein S2 [Micromonospora sp. ATCC 39149] Length = 279 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 126/266 (47%), Positives = 173/266 (65%), Gaps = 8/266 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYDFVRNT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L Sbjct: 61 VAEGGSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEAL 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+ G+TKKE L + R++ KL R L G+RDM LP ++VVDT +E +A+ EAR+L Sbjct: 121 GDLSGTAAGYTKKETLQLSREKIKLTRTLGGLRDMQKLPAAIWVVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP++AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG IAR G D K Sbjct: 181 GIPVIAVLDTNCDPDEVDFPIPGNDDAIRSAELLTRVVAAAVADGLIARSGRRRGGDEKP 240 Query: 240 A-----GETVVHSKEGMQLEEDSQSS 260 + + E LEE ++ Sbjct: 241 EPGQVGADEPLAEWERELLEEPKKAD 266 >gi|116749213|ref|YP_845900.1| 30S ribosomal protein S2 [Syntrophobacter fumaroxidans MPOB] gi|166226763|sp|A0LJ63|RS2_SYNFM RecName: Full=30S ribosomal protein S2 gi|116698277|gb|ABK17465.1| SSU ribosomal protein S2P [Syntrophobacter fumaroxidans MPOB] Length = 274 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 109/265 (41%), Positives = 164/265 (61%), Gaps = 1/265 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A Q ++ T Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKTYIFGARNGIYIIDLQRTVRLFHTAYQFVTQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA D + E A+R Y +N +WLGGM+TN+KT+ + +L++L+ + Sbjct: 61 VGSGEHVLFVGTKQQARDTIAEEAQRCGMYYINQRWLGGMLTNFKTIKLRVDRLKELDAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE L + +R+KL++ L GI++M LP ++VVDT RE +A+ EA RL Sbjct: 121 VEDGSINRFPKKEILQLMGEREKLEKNLGGIKNMARLPGALYVVDTQRENIAVLEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +PDL++Y IPGNDD+ R+I L VA A +G R AD Sbjct: 181 IPVVAIVDTNCDPDLINYPIPGNDDAIRAIRLITSKVADACAEGRRRLEETEQADHDKEF 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLD 266 + G L++++ +++ Sbjct: 241 TALEEVPAGQILKDEASGPIVEIVN 265 >gi|323701845|ref|ZP_08113515.1| ribosomal protein S2 [Desulfotomaculum nigrificans DSM 574] gi|323533149|gb|EGB23018.1| ribosomal protein S2 [Desulfotomaculum nigrificans DSM 574] Length = 232 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 99/229 (43%), Positives = 151/229 (65%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVRKVEEAYEFVKQL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG I+FV TK QA + V E A+R Y VN +WLGGM+TN++T+ I +L +LE + Sbjct: 61 AAEGGSIMFVGTKKQAQEAVKEEAERCGMYYVNQRWLGGMLTNFQTIRHRIDRLHELERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++KL + L GI++M LP +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVAQLLHEKEKLDKFLGGIKNMRRLPGALFIIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKIADAVLEGKQGEQ 229 >gi|254382044|ref|ZP_04997406.1| 30S ribosomal protein S2 [Streptomyces sp. Mg1] gi|194340951|gb|EDX21917.1| 30S ribosomal protein S2 [Streptomyces sp. Mg1] Length = 309 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 113/263 (42%), Positives = 169/263 (64%), Gaps = 6/263 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + Sbjct: 1 MAMAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 ETVAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELE 120 Query: 121 --ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR Sbjct: 121 AIDFEDVAASGLTKKELLVLSREKIKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEAR 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD-- 236 +L IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 KLHIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAATGDSK 240 Query: 237 --TKSAGETVVHSKEGMQLEEDS 257 K+A E + + + E Sbjct: 241 PGEKAAAEPLAEWERDLLEGEKK 263 >gi|330466304|ref|YP_004404047.1| 30S ribosomal protein S2 [Verrucosispora maris AB-18-032] gi|328809275|gb|AEB43447.1| 30S ribosomal protein S2 [Verrucosispora maris AB-18-032] Length = 289 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 120/265 (45%), Positives = 173/265 (65%), Gaps = 7/265 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRNT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L Sbjct: 61 VAEGGSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEAL 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+ G+TKKE L + R++ KL + L G+RDM LP +++VDT +E +A+ EAR+L Sbjct: 121 GDLSGTAAGYTKKETLQLSREKIKLTKTLGGLRDMQKLPAAVWIVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-----ARQHSYMGA 235 IP++AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG+ R+ Sbjct: 181 GIPVIAVLDTNCDPDEVDFPIPGNDDAIRSAELLTRVVAAAVADGLIARSGRRRGGDEKP 240 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSS 260 + A + + E LEE ++ Sbjct: 241 EAGVATDEPLAEWERELLEEPKKAD 265 >gi|256784934|ref|ZP_05523365.1| 30S ribosomal protein S2 [Streptomyces lividans TK24] gi|289768827|ref|ZP_06528205.1| 30S ribosomal protein S2 [Streptomyces lividans TK24] gi|289699026|gb|EFD66455.1| 30S ribosomal protein S2 [Streptomyces lividans TK24] Length = 315 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 111/263 (42%), Positives = 171/263 (65%), Gaps = 4/263 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--K 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + G K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAGGAKGDK 240 Query: 239 SAGETVVHSKEGMQLEEDSQSSE 261 +AGE + + + E ++ + Sbjct: 241 AAGEPLAAWERDLLEGEKAEKKD 263 >gi|125973521|ref|YP_001037431.1| SSU ribosomal protein S2P [Clostridium thermocellum ATCC 27405] gi|256003339|ref|ZP_05428330.1| ribosomal protein S2 [Clostridium thermocellum DSM 2360] gi|281417724|ref|ZP_06248744.1| ribosomal protein S2 [Clostridium thermocellum JW20] gi|166225265|sp|A3DE59|RS2_CLOTH RecName: Full=30S ribosomal protein S2 gi|125713746|gb|ABN52238.1| SSU ribosomal protein S2P [Clostridium thermocellum ATCC 27405] gi|255992629|gb|EEU02720.1| ribosomal protein S2 [Clostridium thermocellum DSM 2360] gi|281409126|gb|EFB39384.1| ribosomal protein S2 [Clostridium thermocellum JW20] gi|316940239|gb|ADU74273.1| ribosomal protein S2 [Clostridium thermocellum DSM 1313] Length = 252 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 107/254 (42%), Positives = 164/254 (64%), Gaps = 3/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVEEAYYFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A+R+ QY VN++WLGGM+TN+KT+ I +L++L ++ Sbjct: 61 AMNGQGVLFVGTKKQAQDSIREEAQRADQYYVNARWLGGMLTNFKTIKGRINRLKELTKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++KL++ L GI++M LP +FVVD +E++A+ EARRL Sbjct: 121 EEEGVFDVLPKKEVTKLRAEKEKLEKYLGGIKEMKELPGALFVVDPRKERIAVLEARRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G RQ + ++ + Sbjct: 181 IPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLIASKMADAIIEG--RQGEQLSVESTAQE 238 Query: 242 ETVVHSKEGMQLEE 255 + ++E +E Sbjct: 239 QVEETAQEETAVEA 252 >gi|302389815|ref|YP_003825636.1| SSU ribosomal protein S2P [Thermosediminibacter oceani DSM 16646] gi|302200443|gb|ADL08013.1| SSU ribosomal protein S2P [Thermosediminibacter oceani DSM 16646] Length = 233 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 107/232 (46%), Positives = 162/232 (69%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV +++A + + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTVKKMEEAYEFVKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA + + E AKR + VN +WLGGM+TN+KT+ + I++L++LE + Sbjct: 61 AAEGGKILFVGTKKQAQESIQEEAKRCEMFYVNQRWLGGMLTNFKTIKKRIERLKELERM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE LN+ R++++L++ L GI++M LPD +FVVD +EK+A+ EAR+L+ Sbjct: 121 EEEGVFNVLPKKEVLNLRREKERLEKYLGGIKNMTSLPDALFVVDPRKEKIAVSEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPI+A+VDTN +PD VDYVIPGNDD+ R++ L + +A A ++G Sbjct: 181 IPIIAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTEKIADAVLEGKQGVQMAA 232 >gi|292670553|ref|ZP_06603979.1| 30S ribosomal protein S2 [Selenomonas noxia ATCC 43541] gi|292647719|gb|EFF65691.1| 30S ribosomal protein S2 [Selenomonas noxia ATCC 43541] Length = 248 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 158/242 (65%), Gaps = 6/242 (2%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 ++ +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 12 SMAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLRS 71 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 G +LF+ TK QA + + E A R+ + VN +WLGGMMTN++T+ + I +L+ LEE Sbjct: 72 VAQEGKSVLFIGTKKQAQEAIREEALRANMFYVNERWLGGMMTNFQTIQRRIHRLKTLEE 131 Query: 122 L-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + N TKKE + +++KL+R L GI+DM LP +FVVD +E++A+ EAR+L Sbjct: 132 MEENGTFDLLTKKEVQGLRHEKEKLERYLGGIKDMNRLPGALFVVDPRKERIAVAEARKL 191 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G S GA ++A Sbjct: 192 NIPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEG-----SQGGASEEAA 246 Query: 241 GE 242 E Sbjct: 247 AE 248 >gi|21223979|ref|NP_629758.1| 30S ribosomal protein S2 [Streptomyces coelicolor A3(2)] gi|3192017|emb|CAA19416.1| 30S ribosomal protein S2 [Streptomyces coelicolor A3(2)] Length = 310 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 111/263 (42%), Positives = 171/263 (65%), Gaps = 4/263 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--K 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + G K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAGGAKGDK 240 Query: 239 SAGETVVHSKEGMQLEEDSQSSE 261 +AGE + + + E ++ + Sbjct: 241 AAGEPLAAWERDLLEGEKAEKKD 263 >gi|288922421|ref|ZP_06416609.1| ribosomal protein S2 [Frankia sp. EUN1f] gi|288346224|gb|EFC80565.1| ribosomal protein S2 [Frankia sp. EUN1f] Length = 305 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 114/254 (44%), Positives = 168/254 (66%), Gaps = 2/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +T Sbjct: 1 MAVVTMKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ Sbjct: 61 VAHGGTVLFIGTKKQAQEAIEEQALRVGMPFVKERWLGGMLTNFSTVYKRLQRLKELEEI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L Sbjct: 121 ELTGGTEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA A +G+ + + ++ ++ Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVAEGLMSR-AGASSNAEAKP 239 Query: 242 ETVVHSKEGMQLEE 255 E + + E+ Sbjct: 240 EQSTGEEPLAEWEQ 253 >gi|28378686|ref|NP_785578.1| 30S ribosomal protein S2 [Lactobacillus plantarum WCFS1] gi|254556884|ref|YP_003063301.1| 30S ribosomal protein S2 [Lactobacillus plantarum JDM1] gi|300768199|ref|ZP_07078104.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180827|ref|YP_003924955.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258330|sp|Q88VJ4|RS2_LACPL RecName: Full=30S ribosomal protein S2 gi|28271523|emb|CAD64427.1| ribosomal protein S2 [Lactobacillus plantarum WCFS1] gi|254045811|gb|ACT62604.1| 30S ribosomal protein S2 [Lactobacillus plantarum JDM1] gi|300494263|gb|EFK29426.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046318|gb|ADN98861.1| 30S ribosomal protein S2 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 267 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 108/267 (40%), Positives = 170/267 (63%), Gaps = 8/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDSAYNFVKDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA D + E A R+ QY VN +WLGG +TNW T+ I++L+DL+++ Sbjct: 61 AADDGVILFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWNTIQTRIKRLKDLKKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R KL++ L GI DM +PD++F+VD +E++A++EA++L Sbjct: 121 EADGTFERLPKKEVSLLMKQRAKLEKFLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA------ 235 IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAVIEGRQGEDEDVTEDSFKDN 240 Query: 236 -DTKSAGETVVHSKEGMQLEEDSQSSE 261 D K + +++ E ++ + D++S + Sbjct: 241 KDAKKSVDSLEDIVEAVEGDNDAKSDK 267 >gi|300865575|ref|ZP_07110354.1| 30S ribosomal protein S2 [Oscillatoria sp. PCC 6506] gi|300336447|emb|CBN55504.1| 30S ribosomal protein S2 [Oscillatoria sp. PCC 6506] Length = 269 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 108/269 (40%), Positives = 153/269 (56%), Gaps = 5/269 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ Q+LESGV FGH+ WNPKM YIF ERN HIIDL QT +++ A + + + Sbjct: 1 MSVVSLAQMLESGVHFGHQTRRWNPKMSPYIFTERNGVHIIDLVQTAQLMEDAYEYMREA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ V + A R Y VN +WLGGM+TNW T+ +++L+DLE Sbjct: 61 SEKGKKFLFVGTKRQAAGIVAQEAHRCGAYYVNQRWLGGMLTNWTTIKSRVERLKDLERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD + +VD RE A+ E ++L Sbjct: 121 EETGALDLLPKKEASTLRRELAKLQKYLGGIKSMRKIPDAVVLVDQRREYNAVLECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +PDLVD IP NDD+ RSI L +A A +G Q D Sbjct: 181 IPIVSLLDTNCDPDLVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQLESEVEDYYEEY 240 Query: 242 ETVVHSKEGMQLEE----DSQSSESSVLD 266 E E +LEE DS++ E + + Sbjct: 241 EGGEDDYEAGELEELDIPDSEADEDAEAE 269 >gi|147677587|ref|YP_001211802.1| 30S ribosomal protein S2 [Pelotomaculum thermopropionicum SI] gi|189044947|sp|A5D2T5|RS2_PELTS RecName: Full=30S ribosomal protein S2 gi|146273684|dbj|BAF59433.1| ribosomal protein S2 [Pelotomaculum thermopropionicum SI] Length = 232 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 153/229 (66%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +TV +++A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEEAYNFIKQL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + V E A+R + VN +WLGGM+TN++T+ + I +L++LE++ Sbjct: 61 AAEGETVLFVGTKKQAQEAVQEEAERCGMFYVNQRWLGGMLTNFQTIRRRIDRLQELEKM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++KL++ L GI++M LP +FV+D +E++A+ EAR+L Sbjct: 121 EENGSLEVLPKKEVAELMHEKEKLQKFLGGIKEMRRLPGALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +PD VDYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 IPIVAIVDTNCDPDEVDYVIPGNDDAIRAVRLLTAKMADAVLEGKQGEQ 229 >gi|327329706|gb|EGE71462.1| ribosomal protein S2 [Propionibacterium acnes HL096PA3] Length = 274 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 122/271 (45%), Positives = 179/271 (66%), Gaps = 3/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 E + + + LE D +E+ D A Sbjct: 241 AEPMPDWEREL-LEGDGAKTEAKKADEAPEA 270 >gi|312135569|ref|YP_004002907.1| 30S ribosomal protein S2 [Caldicellulosiruptor owensensis OL] gi|311775620|gb|ADQ05107.1| ribosomal protein S2 [Caldicellulosiruptor owensensis OL] Length = 258 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 100/258 (38%), Positives = 165/258 (63%), Gaps = 6/258 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFDVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH-----SYMGAD 236 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEGREGEQFTPANTSSQEA 240 Query: 237 TKSAGETVVHSKEGMQLE 254 K++G+ + + + + E Sbjct: 241 DKASGQVEITADDDIDEE 258 >gi|269127616|ref|YP_003300986.1| 30S ribosomal protein S2 [Thermomonospora curvata DSM 43183] gi|268312574|gb|ACY98948.1| ribosomal protein S2 [Thermomonospora curvata DSM 43183] Length = 283 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 120/278 (43%), Positives = 175/278 (62%), Gaps = 3/278 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + I +TV Sbjct: 3 PVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFIKETV 62 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL- 122 A GG ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + + +L++LEE+ Sbjct: 63 AHGGTILFVGTKKQAQEAIAEQAQRVGMPYVNQRWLGGMLTNFSTVHKRLTRLKELEEIN 122 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + G TKKE L ++R++DKL R L GIRDM +P +++VDT +E +A+ EA++L Sbjct: 123 YDDVAGSGMTKKELLGLKREKDKLARTLGGIRDMNKVPSAIWIVDTKKEHIAVNEAKKLG 182 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PD VDY IPGNDD+ RS++L +VA A DG+ + ++ Sbjct: 183 IPVVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVVADAVADGLLARAGAATGESDKPA 242 Query: 242 ETVVHSKEGMQLEED-SQSSESSVLDGQEVAVVPELMS 278 E ++ + E + + + E A E S Sbjct: 243 EAAASAEPLAEWERELLEGGKEKKEQSAEAAPQAEGSS 280 >gi|332307505|ref|YP_004435356.1| ribosomal protein S2 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174834|gb|AEE24088.1| ribosomal protein S2 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 243 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 118/248 (47%), Positives = 167/248 (67%), Gaps = 6/248 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL IS Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK ASD V EAA + Q+ VN +WLGGM+TNWKTV QSI++L+DLE+ Sbjct: 61 ASKKGKILFVGTKRAASDSVREAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L ++R+ KL+ +L GI++MGGLPD +FVVD + E +AI EAR L Sbjct: 121 SQDGTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V++VDTNSNPD VDY+IPGNDD+ R++ L+ + A A I+G + + ++ Sbjct: 181 IPVVSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGREK-----NIEVQAEE 235 Query: 242 ETVVHSKE 249 V + E Sbjct: 236 GEFVEAAE 243 >gi|284992375|ref|YP_003410929.1| 30S ribosomal protein S2 [Geodermatophilus obscurus DSM 43160] gi|284065620|gb|ADB76558.1| ribosomal protein S2 [Geodermatophilus obscurus DSM 43160] Length = 316 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 113/252 (44%), Positives = 167/252 (66%), Gaps = 2/252 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLL+SGV FGH+ WNPKM+R+IF ERN +IIDL QT+ + A + + T Sbjct: 1 MAVVSMKQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLGYIDNAYEFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + +Q+L++LE++ Sbjct: 61 VAHGGSILFVGTKRQAQEVIAEQAQRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEDM 120 Query: 123 LNKENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +KKE+L + R++ KL+R+L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 EQTGVLVSLSKKEQLGLTREKAKLERSLGGIRDMQKVPSAVWIVDTKKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ RS AL ++A A +G +AR S A + Sbjct: 181 IPVVAILDTNCDPDEVDYKIPGNDDAIRSAALLTRVIADAVAEGLMARSASQANAGREDG 240 Query: 241 GETVVHSKEGMQ 252 G+ + E + Sbjct: 241 GQQAIGGDEPLA 252 >gi|154249917|ref|YP_001410742.1| 30S ribosomal protein S2 [Fervidobacterium nodosum Rt17-B1] gi|171769413|sp|A7HMF2|RS2_FERNB RecName: Full=30S ribosomal protein S2 gi|154153853|gb|ABS61085.1| ribosomal protein S2 [Fervidobacterium nodosum Rt17-B1] Length = 259 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 109/261 (41%), Positives = 165/261 (63%), Gaps = 4/261 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGHR WNPKM+ YI+ R +IIDL +TV ++ +A + D Sbjct: 1 MPVVTMKQLLEAGVHFGHRTQRWNPKMKPYIYGARKGIYIIDLQKTVKLIDEAYDFVRDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++GG ILFV TK QA V A+R + VN++WLGG++TN++T+ IQ+L +LEE+ Sbjct: 61 ASKGGTILFVGTKKQAQQVVKNEAERCGGFYVNNRWLGGLLTNFQTIQSRIQRLIELEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E KKE+ + + +KL++ L G+++M GLPD++FVVD +EK+A++EA L Sbjct: 121 EANGELDKLPKKEQSKLRKTLEKLRKNLGGLKNMRGLPDVIFVVDPRKEKIAVEEANYLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIP NDD+ R+IAL +A A ++G + + ++A Sbjct: 181 IPIVAMVDTNCDPDPIDYVIPSNDDAIRAIALIASKIADAYLEG---REGVPYSSEEAAA 237 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 + +E + E Sbjct: 238 QPEEKIEEIEINIPEGIGEEE 258 >gi|118617637|ref|YP_905969.1| 30S ribosomal protein S2 [Mycobacterium ulcerans Agy99] gi|118569747|gb|ABL04498.1| 30S ribosomal protein S2 RpsB [Mycobacterium ulcerans Agy99] Length = 271 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 113/246 (45%), Positives = 163/246 (66%), Gaps = 1/246 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA GG Sbjct: 1 MKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 +LFV TK QA + V A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 TVLFVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGG 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G +KKE L + R+++KL+R+L GIRDM +P ++VVDTN+E +A+ EAR+L IP++A Sbjct: 121 FEGRSKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 ++DTN +PD VDY IPGNDD+ RS AL ++ASA +G+ + D K E Sbjct: 181 ILDTNCDPDEVDYPIPGNDDAIRSAALLTKVIASAVAEGLQARAGAGRGDGKPVVEAAEP 240 Query: 247 SKEGMQ 252 E Q Sbjct: 241 LAEWEQ 246 >gi|83589880|ref|YP_429889.1| SSU ribosomal protein S2P [Moorella thermoacetica ATCC 39073] gi|123766794|sp|Q2RJP3|RS2_MOOTA RecName: Full=30S ribosomal protein S2 gi|83572794|gb|ABC19346.1| SSU ribosomal protein S2P [Moorella thermoacetica ATCC 39073] Length = 238 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 105/241 (43%), Positives = 157/241 (65%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I D Sbjct: 1 MAIISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQRTVKKIEEAYNFIRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V E A+R + VN +WLGG +TN++T+ + I++L++LE + Sbjct: 61 SRDGGKVLFVGTKKQAQESVKEEAERCGMFYVNVRWLGGTLTNFQTIRRRIERLKELERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE ++ +R+KL+R L GI++M LPD +F++D +E++A+ E RRL Sbjct: 121 EEEGTFDLLPKKEVAHLRGEREKLERFLGGIKEMKSLPDALFIIDPRKERIAVAEGRRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Q + ++ Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKMADAVIEG---QQGQDQPEEEAVV 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|323705416|ref|ZP_08116991.1| ribosomal protein S2 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535318|gb|EGB25094.1| ribosomal protein S2 [Thermoanaerobacterium xylanolyticum LX-11] Length = 235 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 153/229 (66%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIEEAYDFIKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ G +LFV TK QA D V E A+R Y VN +WLGGM+TN+KT+ +++L++L+++ Sbjct: 61 VSNDGTVLFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNYKTIRSRVERLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++++KL++ L GI +M LP ++FVVD +E +AI EA+ L Sbjct: 121 EEDGTFEVLPKKEVIKLRKEKEKLQKYLGGIENMNSLPSVLFVVDPKKEAIAIAEAKNLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +P+ VDY IPGNDD+ R++ L +A A I+ + Sbjct: 181 IPIVAIVDTNCDPEEVDYPIPGNDDAIRAVKLIASKIADAVIEAKQGEQ 229 >gi|294631667|ref|ZP_06710227.1| ribosomal protein S2 [Streptomyces sp. e14] gi|292835000|gb|EFF93349.1| ribosomal protein S2 [Streptomyces sp. e14] Length = 303 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 111/258 (43%), Positives = 168/258 (65%), Gaps = 4/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD--TK 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVNAGDKGEK 240 Query: 239 SAGETVVHSKEGMQLEED 256 +AGE + + + E Sbjct: 241 AAGEPLAEWERDLLEGEK 258 >gi|311030100|ref|ZP_07708190.1| 30S ribosomal protein S2 [Bacillus sp. m3-13] Length = 235 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 99/231 (42%), Positives = 156/231 (67%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG +LFV TK QA D V E A+RS Y VN +WLGG +TN++T+ + I +L+ +E++ Sbjct: 61 AGNGGTVLFVGTKKQAQDSVKEEAERSGMYYVNQRWLGGTLTNFETIQKRISRLKAIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L++ L GI+DM GLPD +F++D +E++A+ EAR+L Sbjct: 121 QEDGTFEVLPKKEVVMLKKELDRLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ + + Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQGEETA 231 >gi|315083596|gb|EFT55572.1| ribosomal protein S2 [Propionibacterium acnes HL027PA2] Length = 283 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 121/283 (42%), Positives = 181/283 (63%), Gaps = 11/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 241 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---TPEAE 280 >gi|312139236|ref|YP_004006572.1| 30S ribosomal protein s2 rpsb [Rhodococcus equi 103S] gi|311888575|emb|CBH47887.1| 30S ribosomal protein S2 RpsB [Rhodococcus equi 103S] Length = 276 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 114/254 (44%), Positives = 163/254 (64%), Gaps = 5/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGTILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+ KL R L GIRDM +P ++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM----GADT 237 IP++A++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ + Sbjct: 181 IPVIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGASADKDAKPE 240 Query: 238 KSAGETVVHSKEGM 251 GE + ++ + Sbjct: 241 AGTGEPLAEWEQEL 254 >gi|323466328|gb|ADX70015.1| 30S ribosomal protein S2 [Lactobacillus helveticus H10] Length = 257 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 108/253 (42%), Positives = 151/253 (59%), Gaps = 2/253 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + Sbjct: 5 VTMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKTVAED 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 65 GGVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEMSQD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP+ Sbjct: 125 GTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM-GADTKSAGET 243 VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Q D K + Sbjct: 185 VAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIVEGKQGQDDESVEVDFKKNADG 244 Query: 244 VVHSKEGMQLEED 256 + ED Sbjct: 245 SEEIVSAEENPED 257 >gi|313839936|gb|EFS77650.1| ribosomal protein S2 [Propionibacterium acnes HL086PA1] Length = 283 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 121/283 (42%), Positives = 181/283 (63%), Gaps = 11/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 241 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---APEAE 280 >gi|313763563|gb|EFS34927.1| ribosomal protein S2 [Propionibacterium acnes HL013PA1] gi|313816743|gb|EFS54457.1| ribosomal protein S2 [Propionibacterium acnes HL059PA1] gi|314914717|gb|EFS78548.1| ribosomal protein S2 [Propionibacterium acnes HL005PA4] gi|314919321|gb|EFS83152.1| ribosomal protein S2 [Propionibacterium acnes HL050PA1] gi|314920769|gb|EFS84600.1| ribosomal protein S2 [Propionibacterium acnes HL050PA3] gi|314930649|gb|EFS94480.1| ribosomal protein S2 [Propionibacterium acnes HL067PA1] gi|314954395|gb|EFS98801.1| ribosomal protein S2 [Propionibacterium acnes HL027PA1] gi|314968480|gb|EFT12578.1| ribosomal protein S2 [Propionibacterium acnes HL037PA1] gi|315099190|gb|EFT71166.1| ribosomal protein S2 [Propionibacterium acnes HL059PA2] gi|315100327|gb|EFT72303.1| ribosomal protein S2 [Propionibacterium acnes HL046PA1] gi|315108989|gb|EFT80965.1| ribosomal protein S2 [Propionibacterium acnes HL030PA2] gi|327454942|gb|EGF01597.1| ribosomal protein S2 [Propionibacterium acnes HL087PA3] gi|327457772|gb|EGF04427.1| ribosomal protein S2 [Propionibacterium acnes HL083PA2] gi|328755225|gb|EGF68841.1| ribosomal protein S2 [Propionibacterium acnes HL087PA1] gi|328758296|gb|EGF71912.1| ribosomal protein S2 [Propionibacterium acnes HL025PA2] Length = 283 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 121/283 (42%), Positives = 181/283 (63%), Gaps = 11/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 241 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---APEAE 280 >gi|199597110|ref|ZP_03210542.1| Ribosomal protein S2 [Lactobacillus rhamnosus HN001] gi|229552430|ref|ZP_04441155.1| ribosomal protein S2 [Lactobacillus rhamnosus LMS2-1] gi|258508623|ref|YP_003171374.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus GG] gi|258539800|ref|YP_003174299.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus Lc 705] gi|199591914|gb|EDY99988.1| Ribosomal protein S2 [Lactobacillus rhamnosus HN001] gi|229314167|gb|EEN80140.1| ribosomal protein S2 [Lactobacillus rhamnosus LMS2-1] gi|257148550|emb|CAR87523.1| SSU/30S ribosomal protein S2P [Lactobacillus rhamnosus GG] gi|257151476|emb|CAR90448.1| SSU/30S ribosomal protein S2P [Lactobacillus rhamnosus Lc 705] gi|259649929|dbj|BAI42091.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus GG] Length = 262 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 106/261 (40%), Positives = 167/261 (63%), Gaps = 3/261 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + + Sbjct: 1 MAVLSMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDDAYNFVKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D + E A R+ Q+ VN +WLGG +TNW T+ I++L+D++++ Sbjct: 61 AQNGGVFLFVGTKKQAQDAIAEEATRAGQFYVNHRWLGGTLTNWNTIQTRIKRLKDIKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +++++DKL++ L GI DM +PD++F+VD +EK+A+QEA++L Sbjct: 121 ATDGTFDVLPKKEVSLLKKQQDKLEKFLGGIEDMPRIPDVLFIVDPRKEKIAVQEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + A Sbjct: 181 IPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAIIEGNQGEDQEDDQEQQPAA 240 Query: 242 ETVVHSKEGM--QLEEDSQSS 260 + S E + +E D++ + Sbjct: 241 DKKADSMEDIVEAVEGDNKRA 261 >gi|312127154|ref|YP_003992028.1| 30S ribosomal protein S2 [Caldicellulosiruptor hydrothermalis 108] gi|311777173|gb|ADQ06659.1| ribosomal protein S2 [Caldicellulosiruptor hydrothermalis 108] Length = 258 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 102/258 (39%), Positives = 165/258 (63%), Gaps = 5/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVLTMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKMDEAYEFVKSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A+R + +N +WLGG++TN++T+ I++L++L+ + Sbjct: 61 VAEGKIVLFVGTKKQAQETIKEEAERCGMFYINQRWLGGLLTNFRTIKTRIERLKELQRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++++L + L GI++M +PD++++VD +E+ A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVNLLRKEKERLLKYLGGIQNMPRIPDILYIVDPRKERNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH----SYMGADT 237 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + + +T Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKIADAVIEGREGEQFTPATTSSQET 240 Query: 238 KSAGETVVHSKEGMQLEE 255 A E + + + EE Sbjct: 241 DKASEQMEITVDDGIDEE 258 >gi|161507691|ref|YP_001577647.1| 30S ribosomal protein S2 [Lactobacillus helveticus DPC 4571] gi|260101375|ref|ZP_05751612.1| 30S ribosomal protein S2 [Lactobacillus helveticus DSM 20075] gi|209573657|sp|A8YVR9|RS2_LACH4 RecName: Full=30S ribosomal protein S2 gi|160348680|gb|ABX27354.1| ribosomal protein S2 [Lactobacillus helveticus DPC 4571] gi|260084827|gb|EEW68947.1| 30S ribosomal protein S2 [Lactobacillus helveticus DSM 20075] gi|328465735|gb|EGF36939.1| 30S ribosomal protein S2 [Lactobacillus helveticus MTCC 5463] Length = 257 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 108/253 (42%), Positives = 151/253 (59%), Gaps = 2/253 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + Sbjct: 5 VTMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKTVAED 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 65 GGVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKEMSQD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP+ Sbjct: 125 GTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM-GADTKSAGET 243 VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Q D K + Sbjct: 185 VAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIVEGKQGQDDESVEVDFKKNADG 244 Query: 244 VVHSKEGMQLEED 256 + ED Sbjct: 245 SEEIVSAEENPED 257 >gi|314923768|gb|EFS87599.1| ribosomal protein S2 [Propionibacterium acnes HL001PA1] gi|314966218|gb|EFT10317.1| ribosomal protein S2 [Propionibacterium acnes HL082PA2] gi|314981984|gb|EFT26077.1| ribosomal protein S2 [Propionibacterium acnes HL110PA3] gi|315090895|gb|EFT62871.1| ribosomal protein S2 [Propionibacterium acnes HL110PA4] gi|315095108|gb|EFT67084.1| ribosomal protein S2 [Propionibacterium acnes HL060PA1] gi|315104337|gb|EFT76313.1| ribosomal protein S2 [Propionibacterium acnes HL050PA2] gi|327328114|gb|EGE69883.1| ribosomal protein S2 [Propionibacterium acnes HL103PA1] Length = 296 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 121/284 (42%), Positives = 185/284 (65%), Gaps = 9/284 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 10 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 70 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 129 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 130 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 189 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 190 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 249 Query: 241 GETVVHSK------EGMQLEEDSQS-SESSVLDGQEVAVVPELM 277 E + + +G + E+ +++ +E + ++ PE Sbjct: 250 AEPMPDWERELLEGDGAKPEDKTEAKAEEPKAEAKKADEAPEAE 293 >gi|331003451|ref|ZP_08326950.1| 30S ribosomal protein S2 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412497|gb|EGG91886.1| 30S ribosomal protein S2 [Lachnospiraceae oral taxon 107 str. F0167] Length = 258 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 110/253 (43%), Positives = 160/253 (63%), Gaps = 4/253 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL Q+V M+ A +SD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQQSVGMVDTAYNAMSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK QA D + E A+R Y VN +WLGGM+TN+KT+ I++LR LEE+ Sbjct: 61 AKDGGKILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLRQLEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI+DM +PD +F++D +E++ +QEA L Sbjct: 121 SEDGTFDLLPKKEVIQLKKEWEKLEKNLGGIKDMKDVPDAIFIIDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQHSYMGADTK 238 IP++ + DTN +PD +DY+IPGNDD+ R++ L +A A I+ G S AD Sbjct: 181 IPLIGICDTNCDPDELDYLIPGNDDAIRAVKLIVAKMADAVIEANQGEILSTSEDVADDA 240 Query: 239 SAGETVVHSKEGM 251 GET KE + Sbjct: 241 LEGETFAPEKEAL 253 >gi|298291822|ref|YP_003693761.1| ribosomal protein S2 [Starkeya novella DSM 506] gi|296928333|gb|ADH89142.1| ribosomal protein S2 [Starkeya novella DSM 506] Length = 333 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 156/248 (62%), Positives = 198/248 (79%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP +++RQLLE+GV FGH++ WNPKM +IF RNN HIIDL+QTVP L +ALQ +S Sbjct: 1 MALPDYSMRQLLEAGVHFGHQSHRWNPKMAPFIFGTRNNIHIIDLAQTVPALHRALQAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QA+D V +AAKRSAQY VNS+WLGGM+TNWKT+S SI +L+ LE Sbjct: 61 DTVARGGRVLFVGTKRQAADAVADAAKRSAQYYVNSRWLGGMLTNWKTISHSIARLKKLE 120 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ELLN E G+TKKERL ++R+++KL RAL GIRDMGG+PDL+FV+DTN+E LA+ EARR Sbjct: 121 ELLNAGEGVGYTKKERLTLQREKEKLDRALGGIRDMGGIPDLLFVIDTNKEDLAVAEARR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++DTNS+PD + + +PGNDD+ R+I L+CDLVA AAIDGI R +G D + Sbjct: 181 LGIPVAAILDTNSDPDGIAFPVPGNDDAGRAINLYCDLVARAAIDGIGRAQGDLGIDVGA 240 Query: 240 AGETVVHS 247 A +V Sbjct: 241 AEAPLVEE 248 >gi|50842999|ref|YP_056226.1| 30S ribosomal protein S2 [Propionibacterium acnes KPA171202] gi|289426391|ref|ZP_06428134.1| ribosomal protein S2 [Propionibacterium acnes SK187] gi|289428673|ref|ZP_06430356.1| ribosomal protein S2 [Propionibacterium acnes J165] gi|295131070|ref|YP_003581733.1| ribosomal protein S2 [Propionibacterium acnes SK137] gi|61215509|sp|Q6A7J7|RS2_PROAC RecName: Full=30S ribosomal protein S2 gi|50840601|gb|AAT83268.1| 30S ribosomal protein S2 [Propionibacterium acnes KPA171202] gi|289153119|gb|EFD01837.1| ribosomal protein S2 [Propionibacterium acnes SK187] gi|289158071|gb|EFD06291.1| ribosomal protein S2 [Propionibacterium acnes J165] gi|291375319|gb|ADD99173.1| ribosomal protein S2 [Propionibacterium acnes SK137] gi|313773502|gb|EFS39468.1| ribosomal protein S2 [Propionibacterium acnes HL074PA1] gi|313793956|gb|EFS41980.1| ribosomal protein S2 [Propionibacterium acnes HL110PA1] gi|313801343|gb|EFS42594.1| ribosomal protein S2 [Propionibacterium acnes HL110PA2] gi|313807977|gb|EFS46458.1| ribosomal protein S2 [Propionibacterium acnes HL087PA2] gi|313811554|gb|EFS49268.1| ribosomal protein S2 [Propionibacterium acnes HL083PA1] gi|313819546|gb|EFS57260.1| ribosomal protein S2 [Propionibacterium acnes HL046PA2] gi|313822131|gb|EFS59845.1| ribosomal protein S2 [Propionibacterium acnes HL036PA1] gi|313823635|gb|EFS61349.1| ribosomal protein S2 [Propionibacterium acnes HL036PA2] gi|313825959|gb|EFS63673.1| ribosomal protein S2 [Propionibacterium acnes HL063PA1] gi|313831294|gb|EFS69008.1| ribosomal protein S2 [Propionibacterium acnes HL007PA1] gi|313834905|gb|EFS72619.1| ribosomal protein S2 [Propionibacterium acnes HL056PA1] gi|314924716|gb|EFS88547.1| ribosomal protein S2 [Propionibacterium acnes HL036PA3] gi|314962113|gb|EFT06214.1| ribosomal protein S2 [Propionibacterium acnes HL002PA2] gi|314963692|gb|EFT07792.1| ribosomal protein S2 [Propionibacterium acnes HL082PA1] gi|314974170|gb|EFT18266.1| ribosomal protein S2 [Propionibacterium acnes HL053PA1] gi|314976540|gb|EFT20635.1| ribosomal protein S2 [Propionibacterium acnes HL045PA1] gi|314979005|gb|EFT23099.1| ribosomal protein S2 [Propionibacterium acnes HL072PA2] gi|314984359|gb|EFT28451.1| ribosomal protein S2 [Propionibacterium acnes HL005PA1] gi|314986549|gb|EFT30641.1| ribosomal protein S2 [Propionibacterium acnes HL005PA2] gi|314990908|gb|EFT34999.1| ribosomal protein S2 [Propionibacterium acnes HL005PA3] gi|315079542|gb|EFT51535.1| ribosomal protein S2 [Propionibacterium acnes HL053PA2] gi|315081230|gb|EFT53206.1| ribosomal protein S2 [Propionibacterium acnes HL078PA1] gi|315087113|gb|EFT59089.1| ribosomal protein S2 [Propionibacterium acnes HL002PA3] gi|315089286|gb|EFT61262.1| ribosomal protein S2 [Propionibacterium acnes HL072PA1] gi|315095309|gb|EFT67285.1| ribosomal protein S2 [Propionibacterium acnes HL038PA1] gi|327328428|gb|EGE70190.1| ribosomal protein S2 [Propionibacterium acnes HL096PA2] gi|327334222|gb|EGE75936.1| ribosomal protein S2 [Propionibacterium acnes HL097PA1] gi|327444215|gb|EGE90869.1| ribosomal protein S2 [Propionibacterium acnes HL043PA2] gi|327444906|gb|EGE91560.1| ribosomal protein S2 [Propionibacterium acnes HL043PA1] gi|327446391|gb|EGE93045.1| ribosomal protein S2 [Propionibacterium acnes HL013PA2] gi|327452021|gb|EGE98675.1| ribosomal protein S2 [Propionibacterium acnes HL092PA1] gi|328752381|gb|EGF65997.1| ribosomal protein S2 [Propionibacterium acnes HL020PA1] gi|328760016|gb|EGF73598.1| ribosomal protein S2 [Propionibacterium acnes HL099PA1] gi|332675949|gb|AEE72765.1| 30S ribosomal protein S2 [Propionibacterium acnes 266] Length = 283 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 121/283 (42%), Positives = 181/283 (63%), Gaps = 11/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 241 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---APEAE 280 >gi|282854670|ref|ZP_06264005.1| ribosomal protein S2 [Propionibacterium acnes J139] gi|282582252|gb|EFB87634.1| ribosomal protein S2 [Propionibacterium acnes J139] Length = 287 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 121/284 (42%), Positives = 185/284 (65%), Gaps = 9/284 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQS-SESSVLDGQEVAVVPELM 277 E + + +G + E+ +++ +E + ++ PE Sbjct: 241 AEPMPDWERELLEGDGAKPEDKTEAKAEEPKAEAKKADEAPEAE 284 >gi|58337547|ref|YP_194132.1| 30S ribosomal protein S2 [Lactobacillus acidophilus NCFM] gi|227904188|ref|ZP_04021993.1| 30S ribosomal protein S2 [Lactobacillus acidophilus ATCC 4796] gi|75507581|sp|Q5FJM3|RS2_LACAC RecName: Full=30S ribosomal protein S2 gi|58254864|gb|AAV43101.1| 30s ribosomal proteinS2 [Lactobacillus acidophilus NCFM] gi|227868207|gb|EEJ75628.1| 30S ribosomal protein S2 [Lactobacillus acidophilus ATCC 4796] Length = 258 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 114/262 (43%), Positives = 158/262 (60%), Gaps = 9/262 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + Sbjct: 5 VTMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAED 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 65 GGVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVRRLKQLKEMSED 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP+ Sbjct: 125 GTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN++PD +D VIP NDD+ R+I L +A A I+G G D + E Sbjct: 185 VAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIIEGKQ------GQDDEETLE-- 236 Query: 245 VHSKEGMQLEEDSQSSESSVLD 266 V KE E+ S+E + D Sbjct: 237 VDFKENADGSEEIVSAEENPED 258 >gi|260426326|ref|ZP_05780305.1| ribosomal protein S2 [Citreicella sp. SE45] gi|260420818|gb|EEX14069.1| ribosomal protein S2 [Citreicella sp. SE45] Length = 255 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 136/247 (55%), Positives = 189/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL+ I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHILDLTQTVPMLDAALKAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + EAA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAAPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSIARLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E ++ +G TKKERL +ER + KL+ +L GIR+MGGLPD++FV+D +E+LAI EA++L Sbjct: 121 EQMDTGAEGLTKKERLGMERDQQKLQASLGGIREMGGLPDMLFVIDVKKEQLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +PD VDY+IPGNDD++R+I+L+CDLV+ AA+DG+ Q G D + Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVSRAALDGMTGQMEAAGVDLGAL 240 Query: 241 GETVVHS 247 + Sbjct: 241 EDAPAEE 247 >gi|315038585|ref|YP_004032153.1| 30S ribosomal protein S2 [Lactobacillus amylovorus GRL 1112] gi|325957060|ref|YP_004292472.1| 30S ribosomal protein S2 [Lactobacillus acidophilus 30SC] gi|312276718|gb|ADQ59358.1| 30S ribosomal protein S2 [Lactobacillus amylovorus GRL 1112] gi|325333625|gb|ADZ07533.1| 30S ribosomal protein S2 [Lactobacillus acidophilus 30SC] gi|327183782|gb|AEA32229.1| 30S ribosomal protein S2 [Lactobacillus amylovorus GRL 1118] Length = 257 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 107/253 (42%), Positives = 152/253 (60%), Gaps = 2/253 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + Sbjct: 5 VTMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAQD 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 65 GGVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVRRLKQLKEMSQD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++ DKL++ L GI DM +PD++FVVD +EK+A+ EA L IP+ Sbjct: 125 GTFDVLPKKEVALLTKEMDKLEKFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Q + D K + Sbjct: 185 VAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAIVEGKQGQDDETVEVDFKENADG 244 Query: 244 VVHSKEGMQLEED 256 + ED Sbjct: 245 SDEIVSAEENPED 257 >gi|255325240|ref|ZP_05366346.1| ribosomal protein S2 [Corynebacterium tuberculostearicum SK141] gi|255297805|gb|EET77116.1| ribosomal protein S2 [Corynebacterium tuberculostearicum SK141] Length = 344 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 114/272 (41%), Positives = 171/272 (62%), Gaps = 2/272 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 68 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 127 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 128 VAHGGTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 187 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E+ G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA +L Sbjct: 188 DEREDGYKGRTKKEVLMLNRERAKLERVLGGISDMAKTPSALWIVDTNKEHIAVKEAHKL 247 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G + A K A Sbjct: 248 NIPVVAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEA 307 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 ++ + S +S +E + Sbjct: 308 AGDSAEKEKRDAEAAAAASDPASAEKSEEASA 339 >gi|109897574|ref|YP_660829.1| ribosomal protein S2 [Pseudoalteromonas atlantica T6c] gi|123171513|sp|Q15WG3|RS2_PSEA6 RecName: Full=30S ribosomal protein S2 gi|109699855|gb|ABG39775.1| SSU ribosomal protein S2P [Pseudoalteromonas atlantica T6c] Length = 243 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 116/248 (46%), Positives = 166/248 (66%), Gaps = 6/248 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL I Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYIGSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK ASD V +AA + Q+ VN +WLGGM+TNWKTV QSI++L+DLE+ Sbjct: 61 ASKKGKILFVGTKRAASDSVRDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L ++R+ KL+ +L GI++MGGLPD +FVVD + E +AI EAR L Sbjct: 121 SQDGTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V++VDTNSNPD VDY+IPGNDD+ R++ L+ + A A I+G + + ++ Sbjct: 181 IPVVSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGREK-----NIEVQAEE 235 Query: 242 ETVVHSKE 249 V + E Sbjct: 236 GEFVEAAE 243 >gi|258653279|ref|YP_003202435.1| 30S ribosomal protein S2 [Nakamurella multipartita DSM 44233] gi|258556504|gb|ACV79446.1| ribosomal protein S2 [Nakamurella multipartita DSM 44233] Length = 296 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 114/262 (43%), Positives = 171/262 (65%), Gaps = 3/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+L++GV FGH+ WNPKM+R+IF ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRQMLDAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLQYVDRAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN++TV + +Q+L+DLE + Sbjct: 61 VAHGGTILFVGTKRQAQEAIAEQATRVNMPYVNQRWLGGMLTNFQTVHKRLQRLKDLEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + E +G TKKE L + R++DKL + L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 ETSGEFEGRTKKEVLLLTREKDKLAKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAV+DTN +PD VDY +PGNDD+ RS AL ++A A G+ + GA + Sbjct: 181 IPVVAVLDTNCDPDEVDYPVPGNDDAIRSAALLTKVIAEAVAAGLIARSG--GAAGGTQE 238 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 E + + + + + ++ Sbjct: 239 EPLAEWERELLAASEQPVATTA 260 >gi|239982583|ref|ZP_04705107.1| 30S ribosomal protein S2 [Streptomyces albus J1074] gi|291454426|ref|ZP_06593816.1| 30S ribosomal protein S2 [Streptomyces albus J1074] gi|291357375|gb|EFE84277.1| 30S ribosomal protein S2 [Streptomyces albus J1074] Length = 312 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 117/297 (39%), Positives = 180/297 (60%), Gaps = 23/297 (7%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--- 237 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D+ Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDSKPG 240 Query: 238 -KSAGETVVHSKEGM-----------------QLEEDSQSSESSVLDGQEVAVVPEL 276 K+AGE + + + +E S+E+ + E AV P + Sbjct: 241 DKAAGEPLAEWERDLLEGDKTPAEAAEAETPAAKDEVQTSAETEKVADAEQAVAPAV 297 >gi|218438143|ref|YP_002376472.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 7424] gi|218170871|gb|ACK69604.1| ribosomal protein S2 [Cyanothece sp. PCC 7424] Length = 269 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 103/260 (39%), Positives = 151/260 (58%), Gaps = 6/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +LLESGV FGH+ WNPKM YI+ RN HIIDL QT ++++A + Sbjct: 1 MSVVSLNELLESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAELMEEAYDYMRKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R VN +WLGGM+TNW+T+ ++L++LEE+ Sbjct: 61 SDQGKKFLFVGTKRQAAGIIAQEALRCGSNYVNQRWLGGMLTNWETIRTRAERLKELEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD++ ++D RE A+QE ++L Sbjct: 121 EESGALARRPKKEAAVLRREMYKLQKYLGGIKTMRRIPDVVIIIDLKREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA++DTN +PD VD IP NDD+ RSI L +A A +G +H + +D Sbjct: 181 IPIVALLDTNCDPDYVDVPIPANDDAIRSIKLIIGKLADAIYEG---RHGEVASDEDY-- 235 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 E S E EED Q + Sbjct: 236 EEFDESLEEDDYEEDYQQQD 255 >gi|254462701|ref|ZP_05076117.1| ribosomal protein S2 [Rhodobacterales bacterium HTCC2083] gi|206679290|gb|EDZ43777.1| ribosomal protein S2 [Rhodobacteraceae bacterium HTCC2083] Length = 256 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 139/247 (56%), Positives = 183/247 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDAALNAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGRILFV TK QA+ V AA++ AQY +N +WLGG +TNWKTVSQSI +L+ ++ Sbjct: 61 DTVAKGGRILFVGTKRQAAAPVAAAAEQCAQYYMNHRWLGGTLTNWKTVSQSINRLKSID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L Sbjct: 121 EKFETGFEGLTKKERLGMERDQGKLQASLGGIREMGGVPDLIFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVD+N +PD +DY+IPGNDD++R+IAL+ DL A AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDSNCSPDGIDYIIPGNDDAARAIALYTDLAARAALDGMSAQLGAAGVDLGAM 240 Query: 241 GETVVHS 247 E V Sbjct: 241 EEAPVEE 247 >gi|317051927|ref|YP_004113043.1| 30S ribosomal protein S2 [Desulfurispirillum indicum S5] gi|316947011|gb|ADU66487.1| ribosomal protein S2 [Desulfurispirillum indicum S5] Length = 256 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 99/239 (41%), Positives = 153/239 (64%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+++LLE+GV FGH+ WNPKM+RYIF RN HIIDL +T+ + ++A Sbjct: 1 MPTITMKELLEAGVHFGHQTRRWNPKMKRYIFSSRNGIHIIDLQKTLKLFKRAYDEARLD 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA D + E A R Y +N +WLGG++TN+ T+ + +++L++L L Sbjct: 61 ARGGAKFLFVGTKKQAQDSIKEEALRCGMYFINHRWLGGLLTNFGTIRKRVERLKNLSAL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G++K E +E++R+KL+R L GIRDM +PD+M ++D E A+ EAR L I Sbjct: 121 AEEGYPGYSKLEASRMEKEREKLERNLGGIRDMEKIPDVMVIIDPKNEHNAVLEARNLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +A+VD+N +PD +D+ IPGNDD+ R+I L C +A A ++G ++ +D+ A Sbjct: 181 KTIAIVDSNCDPDYIDFPIPGNDDAIRAIRLICTKIADAILEGNSQLDQQDVSDSGDAA 239 >gi|29829169|ref|NP_823803.1| 30S ribosomal protein S2 [Streptomyces avermitilis MA-4680] gi|38258303|sp|Q82JX7|RS2_STRAW RecName: Full=30S ribosomal protein S2 gi|29606275|dbj|BAC70338.1| putative ribosomal protein S2 [Streptomyces avermitilis MA-4680] Length = 308 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 110/257 (42%), Positives = 167/257 (64%), Gaps = 2/257 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + A+ A Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAGKAEGDKA 240 Query: 241 GETVVHSKEGMQLEEDS 257 + + E LE + Sbjct: 241 AGEPLAAWERDLLEGEK 257 >gi|257068195|ref|YP_003154450.1| 30S ribosomal protein S2P [Brachybacterium faecium DSM 4810] gi|256559013|gb|ACU84860.1| SSU ribosomal protein S2P [Brachybacterium faecium DSM 4810] Length = 318 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 116/270 (42%), Positives = 169/270 (62%), Gaps = 6/270 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPK+ R+IF ERN +I+DL QT+ + KA + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKVRRFIFTERNGIYIVDLMQTLTYIDKAYDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILFV TK QA + V E A R VN +WLGGM+TN +TVS + +L++LE+ Sbjct: 61 VAHGGTILFVGTKKQAQESVQEQATRVGMPYVNQRWLGGMLTNLQTVSARVNRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++DKL++ L GIRDMG P ++VVDTN+E LA+ EA++L Sbjct: 121 DFEDVASSGRTKKELLMMRREKDKLEKTLGGIRDMGKAPSALWVVDTNKEHLAVDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD + Y IPGNDD+ RS+ L ++A A G+ +H+ K+ Sbjct: 181 NIPVVAILDTNCDPDEISYPIPGNDDAIRSVTLLTRVIADAVAAGLQERHAKSTGGEKNV 240 Query: 241 ----GETVVHSKEGMQLEEDSQSSESSVLD 266 E + ++ + + + Q ++ Sbjct: 241 SAVDAEPLAEWEQELLKQSEVQQQDAPAEQ 270 >gi|39997019|ref|NP_952970.1| 30S ribosomal protein S2 [Geobacter sulfurreducens PCA] gi|61215648|sp|Q74BW1|RS2_GEOSL RecName: Full=30S ribosomal protein S2 gi|39983907|gb|AAR35297.1| ribosomal protein S2 [Geobacter sulfurreducens PCA] gi|298506036|gb|ADI84759.1| ribosomal protein S2 [Geobacter sulfurreducens KN400] Length = 251 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 107/230 (46%), Positives = 153/230 (66%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A + + Sbjct: 1 MSNITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYNFVREN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A R Y VN +WLGGM+TN+ TV QSI +L+ L+ + Sbjct: 61 AQAGETMLFVGTKKQAQDAIGEEAVRCGMYFVNQRWLGGMLTNFVTVKQSIDRLKRLDAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +TKKE L +E++R+KL++ L GI+ MG LP +FV+D E +AI EA++L Sbjct: 121 FADGSIEAYTKKEALQLEKEREKLEKILGGIKGMGKLPGALFVIDPKNETIAISEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+VAVVDTN +PD +DYVIPGNDD+ R+I L +A A I+G + + Sbjct: 181 IPVVAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVIEGSQARDA 230 >gi|297191776|ref|ZP_06909174.1| 30S ribosomal protein S2 [Streptomyces pristinaespiralis ATCC 25486] gi|197721706|gb|EDY65614.1| 30S ribosomal protein S2 [Streptomyces pristinaespiralis ATCC 25486] Length = 301 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 113/264 (42%), Positives = 172/264 (65%), Gaps = 7/264 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---- 236 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D Sbjct: 181 HIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGVATGDSKPG 240 Query: 237 TKSAGETVVHSKEGMQLEEDSQSS 260 K+AGE + + + LE + ++ Sbjct: 241 EKAAGEPLAEWERDL-LEGEKKAD 263 >gi|227529096|ref|ZP_03959145.1| ribosomal protein S2 [Lactobacillus vaginalis ATCC 49540] gi|227350940|gb|EEJ41231.1| ribosomal protein S2 [Lactobacillus vaginalis ATCC 49540] Length = 262 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 116/262 (44%), Positives = 165/262 (62%), Gaps = 1/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L Sbjct: 121 SEDGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPKIPDVMFIVDPHKEQIAVKEAQKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +DYVIP NDD+ R++ L +A A I+G Q AD A Sbjct: 181 IPIVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAVIEGKQGQDDNKQADANDAA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 E L+ S E Sbjct: 241 EEEHEEVSEDSLKNLKDSVEGK 262 >gi|226366021|ref|YP_002783804.1| 30S ribosomal protein S2 [Rhodococcus opacus B4] gi|254764487|sp|C1B2U2|RS2_RHOOB RecName: Full=30S ribosomal protein S2 gi|226244511|dbj|BAH54859.1| 30S ribosomal protein S2 [Rhodococcus opacus B4] Length = 288 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 114/254 (44%), Positives = 163/254 (64%), Gaps = 5/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + A R VN +WLGGM+TN+ TV + + +L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+ KL R L GIRDM +P ++VVDTN+E LA+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWVVDTNKEHLAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM----GADT 237 IP++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + Sbjct: 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLSSDKDAKPE 240 Query: 238 KSAGETVVHSKEGM 251 AGE + ++ + Sbjct: 241 AGAGEPLAEWEQEL 254 >gi|315499829|ref|YP_004088632.1| ribosomal protein s2 [Asticcacaulis excentricus CB 48] gi|315417841|gb|ADU14481.1| ribosomal protein S2 [Asticcacaulis excentricus CB 48] Length = 255 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 131/255 (51%), Positives = 188/255 (73%), Gaps = 1/255 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P+ ++R LLE+G FGH+ WNPKMERY+F R+N HIIDLSQT+P+L +AL + Sbjct: 1 MAMPELSMRALLEAGAHFGHQTHRWNPKMERYLFGSRSNIHIIDLSQTLPLLHQALLKVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + A GGR+LFV TK QA+ V AAKRSAQY VN +WLGG +TNW+T+S SI +LR+LE Sbjct: 61 EVAANGGRVLFVGTKRQAAGPVAVAAKRSAQYYVNHRWLGGTLTNWRTISGSIARLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +++ G +KKE L + R+RDKL+ +L GI+DMGG+PDLMFV+DTN+E +AIQEAR+L Sbjct: 121 QVMENPV-GRSKKELLTLTRERDKLELSLGGIKDMGGIPDLMFVIDTNKEAIAIQEARKL 179 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++ ++D+NS+PD + + +PGNDD++R++ L+CDL+A A +DG+A S G D ++ Sbjct: 180 NIPVIGILDSNSDPDGITFPVPGNDDAARALQLYCDLIADAVLDGLAAGQSASGIDLGAS 239 Query: 241 GETVVHSKEGMQLEE 255 + + + E Sbjct: 240 EAPIEPALIAEETGE 254 >gi|297202663|ref|ZP_06920060.1| ribosomal protein S2 [Streptomyces sviceus ATCC 29083] gi|197713238|gb|EDY57272.1| ribosomal protein S2 [Streptomyces sviceus ATCC 29083] Length = 308 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 110/253 (43%), Positives = 167/253 (66%), Gaps = 4/253 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD--TK 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSRVATGDKGEK 240 Query: 239 SAGETVVHSKEGM 251 +AGE + + + Sbjct: 241 AAGEPLAEWERDL 253 >gi|227892611|ref|ZP_04010416.1| ribosomal protein S2 [Lactobacillus ultunensis DSM 16047] gi|227865596|gb|EEJ73017.1| ribosomal protein S2 [Lactobacillus ultunensis DSM 16047] Length = 257 Score = 328 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 108/252 (42%), Positives = 152/252 (60%), Gaps = 5/252 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + Sbjct: 5 VTMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAQD 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ +++L+ L+E+ + Sbjct: 65 GGVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVRRLKQLKEMSQD 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++ DKL+R L GI DM +PD++FVVD +EK+A+ EA L IP+ Sbjct: 125 GTFDVLPKKEVALLTKEMDKLERFLGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM----GADTKSA 240 VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G Q + Sbjct: 185 VAMVDTNTDPDPIDVVIPSNDDAIRAIRLISGAMADAIVEGKQGQDDESVEVDFKENADG 244 Query: 241 GETVVHSKEGMQ 252 E V +KE + Sbjct: 245 SEEVTGAKENPE 256 >gi|302558128|ref|ZP_07310470.1| ribosomal protein S2 [Streptomyces griseoflavus Tu4000] gi|302475746|gb|EFL38839.1| ribosomal protein S2 [Streptomyces griseoflavus Tu4000] Length = 308 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 110/253 (43%), Positives = 168/253 (66%), Gaps = 4/253 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPFVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH--SYMGADTK 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + + G K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLMSRSGAAEAGKGEK 240 Query: 239 SAGETVVHSKEGM 251 +AGE + + + Sbjct: 241 AAGEPLAEWERDL 253 >gi|295399839|ref|ZP_06809820.1| ribosomal protein S2 [Geobacillus thermoglucosidasius C56-YS93] gi|312111649|ref|YP_003989965.1| ribosomal protein S2 [Geobacillus sp. Y4.1MC1] gi|294978242|gb|EFG53839.1| ribosomal protein S2 [Geobacillus thermoglucosidasius C56-YS93] gi|311216750|gb|ADP75354.1| ribosomal protein S2 [Geobacillus sp. Y4.1MC1] Length = 235 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 96/235 (40%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKMEEAYNFAKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA + V E A+R + VN +WLGG +TN+ T+ + I++L+++E++ Sbjct: 61 AANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLKEIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + +++++++L++ L GI++M LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVIRLKKEQERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAVVAAE 235 >gi|99081051|ref|YP_613205.1| 30S ribosomal protein S2 [Ruegeria sp. TM1040] gi|123252399|sp|Q1GHC3|RS2_SILST RecName: Full=30S ribosomal protein S2 gi|99037331|gb|ABF63943.1| SSU ribosomal protein S2P [Ruegeria sp. TM1040] Length = 256 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 141/239 (58%), Positives = 189/239 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHIMDLTQTVPMLDQALTAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAAPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER ++KL+ +L GIRDMGG+PDL+FV+D +E LAI EA +L Sbjct: 121 ERMAAGAEGLTKKERLGMERDQEKLQASLGGIRDMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VAVVDTN +PD VDY+IPGNDD++R+I+L+CDLVA AA+DG++ Q G D + Sbjct: 181 GIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLVARAALDGMSAQLGAAGVDLGA 239 >gi|307942142|ref|ZP_07657493.1| ribosomal protein S2 [Roseibium sp. TrichSKD4] gi|307774428|gb|EFO33638.1| ribosomal protein S2 [Roseibium sp. TrichSKD4] Length = 263 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 149/245 (60%), Positives = 192/245 (78%), Gaps = 1/245 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNP+M +YIF RN+ HI+DLSQTVP+L +AL+ +S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQKHRWNPRMGQYIFGVRNDVHILDLSQTVPLLHQALKAVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+L V TK QA + V A+ SAQY VN++WLGGM+TNWKT+SQSIQ+LR LE Sbjct: 61 DTVAGGGRVLIVGTKRQAQEAVASGARNSAQYFVNARWLGGMLTNWKTISQSIQRLRKLE 120 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E LN + TKKERL ++R+R+KL+R L GI+DMGG+PDL+FV+DTNRE +AIQEARR Sbjct: 121 ETLNSDQANALTKKERLFMDREREKLERNLGGIKDMGGIPDLLFVIDTNREAIAIQEARR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++DTNSNP + Y +PGNDD+ R+IAL+CDL+A AAIDGI+R G D + Sbjct: 181 LGIPVAAILDTNSNPYGITYPVPGNDDAGRAIALYCDLIARAAIDGISRAQCAAGVDVGA 240 Query: 240 AGETV 244 + E Sbjct: 241 SEEAP 245 >gi|316933921|ref|YP_004108903.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris DX-1] gi|315601635|gb|ADU44170.1| ribosomal protein S2 [Rhodopseudomonas palustris DX-1] Length = 331 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 157/268 (58%), Positives = 207/268 (77%), Gaps = 10/268 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++RQLLE+GV FGH++ WNPKM YIF RNN HI+DL+QTVPML +ALQ IS Sbjct: 1 MSLPEFSMRQLLEAGVHFGHQSHRWNPKMADYIFGVRNNIHIVDLTQTVPMLHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR LE Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIRRLRHLE 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLSSADANAYTKKERLELQRERDKLNRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+IAL+CDLVA A IDGI+R +G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLVARAVIDGISRAQGDVGIDIGA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + L ED ++++S G Sbjct: 241 ASQP---------LREDLPAAQASSFQG 259 >gi|259419260|ref|ZP_05743177.1| ribosomal protein S2 [Silicibacter sp. TrichCH4B] gi|259345482|gb|EEW57336.1| ribosomal protein S2 [Silicibacter sp. TrichCH4B] Length = 256 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 140/239 (58%), Positives = 189/239 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +AL I Sbjct: 1 MALPEFTMRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALTAIR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA+ + EAA++SAQY +N +WLGG +TNWKTVSQSI +L++++ Sbjct: 61 DTVAKGGRVLFVGTKRQAAAPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEID 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E + +G TKKERL +ER ++KL+ +L GIRDMGG+PDL+FV+D +E LAI EA +L Sbjct: 121 ERMAAGAEGLTKKERLGMERDQEKLQASLGGIRDMGGVPDLLFVIDVKKEALAIAEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA+VDTN +PD VDY+IPGNDD++R+I+L+CDLVA AA+DG++ Q G D + Sbjct: 181 GIPVVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVARAALDGMSAQLGAAGVDLGA 239 >gi|254294079|ref|YP_003060102.1| ribosomal protein S2 [Hirschia baltica ATCC 49814] gi|254042610|gb|ACT59405.1| ribosomal protein S2 [Hirschia baltica ATCC 49814] Length = 286 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 142/252 (56%), Positives = 195/252 (77%), Gaps = 1/252 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+FT+RQLLE+GV FGH+ WNPKM+RYIF R+ HI+DLSQTVP+L +AL + Sbjct: 1 MALPEFTMRQLLEAGVHFGHQKHRWNPKMDRYIFGARSGIHILDLSQTVPLLHQALVQVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QAS+ V EAA+RSAQY +N +WLGG +TNW TVS SI++LR+L+ Sbjct: 61 DTVAKGGRVLFVGTKRQASEAVAEAAERSAQYFMNDRWLGGTLTNWSTVSNSIKRLRELD 120 Query: 121 ELLNKENQ-GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +LL++ + G TKKE L + R+++KL+R L GIR+MGGLP +MFV+DTN+E +A++EAR+ Sbjct: 121 DLLSQGDGTGLTKKELLKLTREQEKLQRVLGGIRNMGGLPSIMFVIDTNKESIAVKEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN +PD VD+ IPGNDD++R+I L+ +L A A +DG+A +G D Sbjct: 181 LGIPVVAIVDTNCDPDEVDFPIPGNDDATRAIQLYTNLFADAVLDGLAESSMELGVDLGE 240 Query: 240 AGETVVHSKEGM 251 A + + E + Sbjct: 241 AEDISEVALESI 252 >gi|269792353|ref|YP_003317257.1| 30S ribosomal protein S2 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099988|gb|ACZ18975.1| ribosomal protein S2 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 281 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 107/274 (39%), Positives = 171/274 (62%), Gaps = 8/274 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L++A + + Sbjct: 1 MAVVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKGLERAYSFVREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG +LFV TK QA + + A R Q+ +N +WLGG++TN+ T+ + + ++ +L+++ Sbjct: 61 AKEGGSMLFVGTKRQAQEPIRNEALRCGQFYINQRWLGGLLTNFATIRRRVNRMVELQKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++R+KL++ L GI+DM +PD +F++D RE +AI EA +L Sbjct: 121 EADGTINRYPKKEIIQLRKEREKLEKYLSGIKDMRDVPDALFIIDPRRENIAILEAAKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG------IARQHSYMGA 235 IP+VA+VDTN +P+L+ Y IPGNDD+ R+I L L+ASA I+G +A + Sbjct: 181 IPVVAIVDTNCDPELITYPIPGNDDAIRAIELITGLMASAFIEGRQGVDGMATPQADQEE 240 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 A E V+ +E + +E S+ +E+ V E Sbjct: 241 AVSGAAEDVIEIREKLH-DEYSEVAETLVNQELE 273 >gi|111023537|ref|YP_706509.1| 30S ribosomal protein S2 [Rhodococcus jostii RHA1] gi|123339669|sp|Q0S285|RS2_RHOSR RecName: Full=30S ribosomal protein S2 gi|110823067|gb|ABG98351.1| 30S ribosomal protein S2 [Rhodococcus jostii RHA1] Length = 300 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 114/254 (44%), Positives = 163/254 (64%), Gaps = 5/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + A R VN +WLGGM+TN+ TV + + +L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESIAAEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+ KL R L GIRDM +P ++VVDTN+E LA+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWVVDTNKEHLAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM----GADT 237 IP++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + Sbjct: 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLSADKDAKPE 240 Query: 238 KSAGETVVHSKEGM 251 AGE + ++ + Sbjct: 241 AGAGEPLAEWEQEL 254 >gi|290957083|ref|YP_003488265.1| 30S ribosomal protein S2 [Streptomyces scabiei 87.22] gi|260646609|emb|CBG69706.1| 30S ribosomal protein S2 [Streptomyces scabiei 87.22] Length = 308 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 112/262 (42%), Positives = 173/262 (66%), Gaps = 5/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMQKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH--SYMGADTK 238 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + + G K Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSRVATEGKGDK 240 Query: 239 SAGETVVHSKEGMQLEEDSQSS 260 +AGE + + + LE + ++ Sbjct: 241 AAGEPLAAWERDL-LEGEKKAD 261 >gi|269795655|ref|YP_003315110.1| 30S ribosomal protein S2P [Sanguibacter keddieii DSM 10542] gi|269097840|gb|ACZ22276.1| SSU ribosomal protein S2P [Sanguibacter keddieii DSM 10542] Length = 317 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 176/258 (68%), Gaps = 2/258 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +I+DL Q++ + +A + + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIVDLQQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TV++ +Q+L++LE++ Sbjct: 61 VAHGGSILFVGTKKQAQEPVAEQAARVGMPYVNHRWLGGMLTNFQTVNKRLQRLKELEQI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G FTKKE L + R+RDKL R L GIRDM +P +++VDTN+E LA+ EAR+L Sbjct: 121 DFDDVAGSAFTKKELLIMRRERDKLARTLGGIRDMAKIPSAVWIVDTNKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIPIVA++DTN +PD+VDY IPGNDD+ R++AL ++A A +G+ +H+ ++ Sbjct: 181 RIPIVAILDTNCDPDVVDYKIPGNDDAIRAVALLTRVIADAVAEGLIARHAGKSGGAEAT 240 Query: 241 GETVVHSKEGMQLEEDSQ 258 + E LE S+ Sbjct: 241 EAEPLAEWERELLEGASK 258 >gi|315106861|gb|EFT78837.1| ribosomal protein S2 [Propionibacterium acnes HL030PA1] Length = 283 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 121/283 (42%), Positives = 180/283 (63%), Gaps = 11/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYTDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNQRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 241 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---APEAE 280 >gi|302342177|ref|YP_003806706.1| ribosomal protein S2 [Desulfarculus baarsii DSM 2075] gi|301638790|gb|ADK84112.1| ribosomal protein S2 [Desulfarculus baarsii DSM 2075] Length = 273 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 165/263 (62%), Gaps = 2/263 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLE+GV FGH WNPKM YIF RN HI+DL +TV + + A + Sbjct: 1 MAYVTMRQLLEAGVHFGHHTGRWNPKMRGYIFGARNGIHIVDLQKTVKLFRDAYDAVVKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 V+RGG +LFV TK QA+D VME A+R Y VN +WLGGM+TN++T+ +SI + + LE Sbjct: 61 VSRGGDVLFVGTKRQAADIVMEEARRCGMYYVNHRWLGGMLTNFQTIKKSIDRYKWLEGI 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + KKE + + R+ +KL+ L GI+DM LP ++F+VD +E++A+ EA+RL Sbjct: 121 IADGTIDNYPKKEAIGLRRELEKLELNLGGIKDMTRLPSVIFIVDIRKERIAVSEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP VA+VDTN +PD +DYVIPGNDD+ R+I L C VA A ++G+A + GAD + Sbjct: 181 IPTVAIVDTNCDPDNIDYVIPGNDDAIRAIRLMCSKVAEATMEGLALR-DQRGADRAARA 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 + V E L E Sbjct: 240 DGVDMQMEVPGLTVGRADEEGGP 262 >gi|294084088|ref|YP_003550846.1| 30S ribosomal protein S2 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663661|gb|ADE38762.1| Ribosomal protein S2 [Candidatus Puniceispirillum marinum IMCC1322] Length = 287 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 137/246 (55%), Positives = 184/246 (74%), Gaps = 1/246 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP FT+RQ+LE+GV FGH W+P+ME +IF ERN THI+DL QTVPML AL+ IS Sbjct: 1 MALPTFTMRQMLEAGVHFGHSTRRWDPRMEPFIFGERNKTHILDLQQTVPMLHHALKAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A+GGR+LFV TK AS+ + E A+ QY VN +WLGGM+TNW TVSQSI++LRDLE Sbjct: 61 DVAAKGGRVLFVGTKRAASEKIAETARDCGQYYVNHRWLGGMLTNWATVSQSIRRLRDLE 120 Query: 121 E-LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + E TKKE L + R+++KL+R L GI++MGGLPD++F++DTN+E +A+QEA R Sbjct: 121 ARMESGEINQLTKKEILQLTREQEKLERTLGGIKEMGGLPDILFILDTNKEAIAVQEANR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVD+N++P+ VDY+IPGNDD+ R+I +C+LV A +DG+ + G D + Sbjct: 181 LNIPVVAVVDSNASPEGVDYLIPGNDDAMRAITFYCELVQGAVLDGLQTELMKSGGDVGA 240 Query: 240 AGETVV 245 A E V Sbjct: 241 AVEAPV 246 >gi|306834515|ref|ZP_07467628.1| 30S ribosomal protein S2 [Streptococcus bovis ATCC 700338] gi|304423317|gb|EFM26470.1| 30S ribosomal protein S2 [Streptococcus bovis ATCC 700338] Length = 285 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 101/255 (39%), Positives = 168/255 (65%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D Sbjct: 31 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADVAYEFVRDA 90 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 91 AANDAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM 150 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 151 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 210 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + +++ Sbjct: 211 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADVDFASEAQA 270 Query: 242 ETVVHSKEGMQLEED 256 +++ E ++ + + Sbjct: 271 DSIEEIVEVVEGDNE 285 >gi|113474934|ref|YP_720995.1| 30S ribosomal protein S2 [Trichodesmium erythraeum IMS101] gi|123056931|sp|Q116Q2|RS2_TRIEI RecName: Full=30S ribosomal protein S2 gi|110165982|gb|ABG50522.1| SSU ribosomal protein S2P [Trichodesmium erythraeum IMS101] Length = 272 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 110/270 (40%), Positives = 155/270 (57%), Gaps = 3/270 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ QLLESGV FGH+ WNP+M +YIF ERN HIIDL QT ++ +A I Sbjct: 1 MPVVSLAQLLESGVHFGHQTRRWNPRMSQYIFTERNGVHIIDLVQTAQLMDEAYNYIRTA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R Y +N +WLGGM+TNW T+ +++L+DLE Sbjct: 61 SEQGKKFLFVGTKRQAAGIIAQEATRCGGYYINQRWLGGMLTNWTTIKTRVERLKDLERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ KL++ L GI++M LPD + +VD RE A+QE ++L Sbjct: 121 EESKALDLLPKKEASVLRREMAKLQKYLGGIKNMRRLPDGVIMVDQRREYNAVQECQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +P VD IP NDD+ RSI L +A A +G Q D Sbjct: 181 IPIVSLLDTNCDPTQVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQLEADYEDYYEDY 240 Query: 242 ETVVHSKEGMQ--LEEDSQSSESSVLDGQE 269 E EG + L+ DS + E S+ D E Sbjct: 241 EEYEDDYEGAEGDLDLDSANEEESLEDNNE 270 >gi|119717467|ref|YP_924432.1| SSU ribosomal protein S2P [Nocardioides sp. JS614] gi|166225289|sp|A1SLR0|RS2_NOCSJ RecName: Full=30S ribosomal protein S2 gi|119538128|gb|ABL82745.1| SSU ribosomal protein S2P [Nocardioides sp. JS614] Length = 307 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 117/280 (41%), Positives = 178/280 (63%), Gaps = 6/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ + ++ + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLAYIDRSYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV Q I +L++L+E+ Sbjct: 61 VAKGGTIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVHQRINRLKELDEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R+RDKL ++L GIR+M P +++VDTN+E LA++EAR+L Sbjct: 121 DFDDVAGSSRTKKELLQMRRERDKLNKSLGGIREMTRTPSAVWIVDTNKEHLAVEEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ---HSYMGADT 237 RIPI+ ++D+N +PDLVD+ IPGNDD+ R++ L +VA A +G+ + + GA+ Sbjct: 181 RIPIIGILDSNCDPDLVDFPIPGNDDAIRAVGLLTRVVADAVAEGLIARSGVKAGEGAEA 240 Query: 238 KSAGETVVH-SKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 A E + +E + E + + +++ E E Sbjct: 241 VGAEEPLAEWERELLGGEAEQAAVDATGGAATEETPAAES 280 >gi|294635118|ref|ZP_06713629.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685] gi|291091495|gb|EFE24056.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685] Length = 241 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD+VIPGNDD+ R++ L+ VA A +G ++ + +T + Sbjct: 181 IPVFSIVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREGRSQDLASQAEETMAEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|296132867|ref|YP_003640114.1| ribosomal protein S2 [Thermincola sp. JR] gi|296031445|gb|ADG82213.1| ribosomal protein S2 [Thermincola potens JR] Length = 239 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 107/241 (44%), Positives = 164/241 (68%), Gaps = 3/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF +RN +IIDL +TV M++ A + I +T Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAQYIFTDRNGIYIIDLQKTVKMVEIAYEFIKNT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G ILFV TK QA + V E A+R + VN +WLGGM+TN+ T+ + I +L++LE++ Sbjct: 61 VAEGKTILFVGTKKQAQEAVKEEAERCGMFYVNQRWLGGMLTNFHTIRKRINRLQELEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + KKE ++ +++KL++ L GI+DM LP +FV+D +E++A+ EAR+L Sbjct: 121 EVDGTFEVLPKKEVAALQHEKEKLQKFLGGIKDMKELPGALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Q + + +A Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAVLEG--NQGQDVVDEETAAA 238 Query: 242 E 242 E Sbjct: 239 E 239 >gi|170781202|ref|YP_001709534.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. sepedonicus] gi|189044930|sp|B0REP4|RS2_CLAMS RecName: Full=30S ribosomal protein S2 gi|169155770|emb|CAQ00891.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. sepedonicus] Length = 320 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 116/269 (43%), Positives = 178/269 (66%), Gaps = 2/269 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TIRQLL+ GV FGH WNPKM+R+IF ER+ +IIDL Q++ ++ KA + +T Sbjct: 1 MAVVTIRQLLDCGVHFGHPKTRWNPKMKRFIFTERSGIYIIDLQQSLALIDKAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A+R Q VN +WLGG++TN++TV + + +L++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQESIAEQAQRVGQPYVNQRWLGGLLTNFQTVHKRLNRLKELDLV 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +GFTKKE L R+RDKL+++L GIR++ P M+VVDT +E LAI EAR+L Sbjct: 121 DFDDTTRGFTKKELLIQRRERDKLEKSLGGIRNLTKTPSAMWVVDTKKEHLAIDEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ ++DTN +PD V Y IPGNDD+ RS+AL ++A AA +G+ ++H A+ + Sbjct: 181 IPVIGILDTNCDPDEVQYPIPGNDDAIRSVALLTRIIADAAAEGLIQRHQKPDAEGSAPA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E + + + LE+ + + ++ +V Sbjct: 241 EPLADWEREL-LEQGDAAKAALPVEENDV 268 >gi|89895292|ref|YP_518779.1| 30S ribosomal protein S2 [Desulfitobacterium hafniense Y51] gi|219669726|ref|YP_002460161.1| 30S ribosomal protein S2 [Desulfitobacterium hafniense DCB-2] gi|122997250|sp|Q24UF7|RS2_DESHY RecName: Full=30S ribosomal protein S2 gi|254764473|sp|B8FRG5|RS2_DESHD RecName: Full=30S ribosomal protein S2 gi|89334740|dbj|BAE84335.1| 30S ribosomal protein S2 [Desulfitobacterium hafniense Y51] gi|219539986|gb|ACL21725.1| ribosomal protein S2 [Desulfitobacterium hafniense DCB-2] Length = 244 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVEEAYNYVRNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA + V E A+R Y VN +WLGGMMTN++T+ + + +LR+LE++ Sbjct: 61 AADGGTVLFVGTKKQAQESVKEEAERCGMYYVNERWLGGMMTNFQTIQKRVSRLRELEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +KL+R L GI+ M LPD +FVVD +E++A+ EARRL Sbjct: 121 EAEGVFEVLPKKEVAALRHEMEKLERFLGGIKSMKKLPDALFVVDPRKERIAVAEARRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A I+G Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGRIADAIIEGQQ 226 >gi|330838367|ref|YP_004412947.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] gi|329746131|gb|AEB99487.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] Length = 240 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 104/240 (43%), Positives = 156/240 (65%), Gaps = 4/240 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVRKVDEAYNFLRSL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A ++ + VN +WLGGM+TN++T+ + I++L+DLE + Sbjct: 61 AEEGKSVLFVGTKKQAQDAVKEEATKAEMFYVNERWLGGMLTNYQTIQKRIRRLKDLERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L + + KL++ L GI++M LP +FVVD +E++A+ EA++L Sbjct: 121 EEDGTFDVLTKKEVLQLRHEMTKLEKFLGGIKEMNRLPGALFVVDPRKERIAVAEAKKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +ASA ++G + GA ++ Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSAMASAIVEG---RQGQAGAGEEAQD 237 >gi|111225139|ref|YP_715933.1| 30S ribosomal protein S2 [Frankia alni ACN14a] gi|111152671|emb|CAJ64412.1| 30S ribosomal protein S2 [Frankia alni ACN14a] Length = 286 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 123/261 (47%), Positives = 172/261 (65%), Gaps = 5/261 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLESGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + +TVA GG Sbjct: 1 MKQLLESGVHFGHQTKRWNPKMKRYIFTERNGIYIIDLQQTLSYIDRAYDFVKETVAHGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LF+ TK QA + + E A R V +WLGGM+TN+ TV + +Q+L++LEE+ + Sbjct: 61 TVLFIGTKKQAQEAIEEQAARVGMPYVKERWLGGMLTNFSTVYKRLQRLKELEEIEVTGG 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE+L + R++ KL+R L GIRDM +P ++VVDT +E +A+ EAR+L IP+VA Sbjct: 121 TEVRTKKEQLVLTREKAKLERTLGGIRDMSRVPSAVWVVDTKKEHIAVGEARKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTK---SAGE 242 ++DTN +PD VDY IPGNDD+ RS AL +VA A DG +AR + AD K SAGE Sbjct: 181 ILDTNCDPDEVDYPIPGNDDAIRSAALLTRVVADAVADGLMARAGASKAADAKPEQSAGE 240 Query: 243 TVVHSKEGMQLEEDSQSSESS 263 + E L + + +S Sbjct: 241 EPLAEWEQALLRGEGTAPAAS 261 >gi|39935987|ref|NP_948263.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris CGA009] gi|192291640|ref|YP_001992245.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris TIE-1] gi|61215591|sp|Q6N5Q2|RS2_RHOPA RecName: Full=30S ribosomal protein S2; AltName: Full=RRP-S2 gi|229484899|sp|B3Q7K4|RS2_RHOPT RecName: Full=30S ribosomal protein S2 gi|39649841|emb|CAE28363.1| 30S ribosomal protein S2 [Rhodopseudomonas palustris CGA009] gi|192285389|gb|ACF01770.1| ribosomal protein S2 [Rhodopseudomonas palustris TIE-1] Length = 331 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 152/254 (59%), Positives = 200/254 (78%), Gaps = 1/254 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP+F++RQLLE+GV FGH++ WNPKM YIF RNN HI+DL+QTVP+L +ALQ IS Sbjct: 1 MSLPEFSMRQLLEAGVHFGHQSHRWNPKMADYIFGVRNNIHIVDLTQTVPLLHRALQAIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA D V +AAKRSAQY VNS+WLGG +TNWKT+S SI++LR LE Sbjct: 61 DTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIRRLRHLE 120 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++L+ + +TKKERL ++R+RDKL R+L GI+DMGGLPDL+FV+DTN+E +AIQEA+R Sbjct: 121 DVLSSADANAYTKKERLELQRERDKLNRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTN +P + Y++PGNDD+ R+IAL+CDLVA A IDGI+R +G D + Sbjct: 181 LGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLVARAVIDGISRAQGDVGIDIGA 240 Query: 240 AGETVVHSKEGMQL 253 A + + Q Sbjct: 241 AAQPLREDLPAAQA 254 >gi|304436538|ref|ZP_07396511.1| 30S ribosomal protein S2 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370481|gb|EFM24133.1| 30S ribosomal protein S2 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 234 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 104/224 (46%), Positives = 151/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LF+ TK QA + + E A R+ Y VN +WLGGM+TN++T+ + I +L+ LEE+ Sbjct: 61 AQEGKSVLFIGTKKQAQEAIREEALRANMYYVNERWLGGMLTNFQTIQRRIHRLKALEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + TKKE + +++KL+R L GI+DM LP +FVVD +E++A+ EAR+L Sbjct: 121 EENGTFEVLTKKEVQGLRHEKEKLERYLGGIKDMNRLPGALFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEG 224 >gi|297584067|ref|YP_003699847.1| 30S ribosomal protein S2 [Bacillus selenitireducens MLS10] gi|297142524|gb|ADH99281.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] Length = 242 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 105/244 (43%), Positives = 159/244 (65%), Gaps = 3/244 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVRKVDEAFNFVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D V E A+R Y +N +WLGG +TN++T+ + I +L+++E++ Sbjct: 61 AADGGTMLFVGTKKQAQDSVAEEAERCGMYYINQRWLGGTLTNFETIRKRINRLKEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ D+L++ L GI++M LPD +F++D +E++A+ EA +L Sbjct: 121 EEDGTFDVLPKKEVVLIKKEWDRLEKFLGGIKEMTRLPDALFIIDPRKERIAVAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIPGNDD+ R++ L +A A I+ A Q + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPGNDDAIRAVRLLTAKMADAIIE--ANQGEENAGEESQNE 238 Query: 242 ETVV 245 ET V Sbjct: 239 ETTV 242 >gi|84516209|ref|ZP_01003569.1| 30S ribosomal protein S2 [Loktanella vestfoldensis SKA53] gi|84509905|gb|EAQ06362.1| 30S ribosomal protein S2 [Loktanella vestfoldensis SKA53] Length = 276 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 142/247 (57%), Positives = 187/247 (75%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++RQLLE+GV FGH+ WNPKM +YI+ RN HI+DL+QTVPML +ALQVI Sbjct: 16 MALPEFSMRQLLEAGVHFGHQTARWNPKMGQYIYGSRNGIHIMDLTQTVPMLDRALQVIR 75 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA+GGR+LFV TK QA VMEAA++SAQ+ +N +WLGG +TNW+TVSQSI +L+ ++ Sbjct: 76 DTVAKGGRVLFVGTKRQAQTPVMEAAEKSAQFFMNHRWLGGTLTNWQTVSQSISRLKAID 135 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E LAI EA +L Sbjct: 136 EASANGFAGLTKKERLGMEREQGKLQASLGGIREMGGVPDLLFVIDVNKEALAIAEANKL 195 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTN +P +DYVIPGNDD++R+IAL+ DL A AA+DG+ Q G D + Sbjct: 196 GIPVVAVVDTNCSPAGIDYVIPGNDDAARAIALYTDLAARAALDGMTAQLGAAGVDMGAM 255 Query: 241 GETVVHS 247 + Sbjct: 256 ENYAEET 262 >gi|304404279|ref|ZP_07385941.1| ribosomal protein S2 [Paenibacillus curdlanolyticus YK9] gi|304347257|gb|EFM13089.1| ribosomal protein S2 [Paenibacillus curdlanolyticus YK9] Length = 232 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 151/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVDEAYNFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D V E A R + +N +WLGG +TN++T+ + I +L+ LE+ Sbjct: 61 AAEGGTVLFVGTKKQAQDSVKEEAARCGNFYINQRWLGGTLTNFQTIQKRIDRLKQLEKW 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++D+L++ L GI+ M GLP +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFNVLPKKEVIILRKEKDRLEKFLGGIKGMKGLPSALFIIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPIV +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEANQGEQTTA 232 >gi|227878829|ref|ZP_03996736.1| ribosomal protein S2 [Lactobacillus crispatus JV-V01] gi|256843351|ref|ZP_05548839.1| 30S ribosomal protein S2 [Lactobacillus crispatus 125-2-CHN] gi|256849830|ref|ZP_05555261.1| ribosomal protein S2 [Lactobacillus crispatus MV-1A-US] gi|262046924|ref|ZP_06019884.1| 30S ribosomal protein S2 [Lactobacillus crispatus MV-3A-US] gi|293381204|ref|ZP_06627212.1| 30S ribosomal protein S2 [Lactobacillus crispatus 214-1] gi|295693147|ref|YP_003601757.1| 30S ribosomal protein s2 [Lactobacillus crispatus ST1] gi|227861577|gb|EEJ69189.1| ribosomal protein S2 [Lactobacillus crispatus JV-V01] gi|256614771|gb|EEU19972.1| 30S ribosomal protein S2 [Lactobacillus crispatus 125-2-CHN] gi|256713319|gb|EEU28309.1| ribosomal protein S2 [Lactobacillus crispatus MV-1A-US] gi|260572906|gb|EEX29466.1| 30S ribosomal protein S2 [Lactobacillus crispatus MV-3A-US] gi|290922244|gb|EFD99238.1| 30S ribosomal protein S2 [Lactobacillus crispatus 214-1] gi|295031253|emb|CBL50732.1| 30S ribosomal protein S2 [Lactobacillus crispatus ST1] Length = 257 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 111/262 (42%), Positives = 157/262 (59%), Gaps = 10/262 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ ML A + Sbjct: 5 VTMKQLLEAGVHFGHQTRRWNPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKAVAQD 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG LFV TK QA D + E A R+ QY VN +WLGG +TNW T+ I++L+ L+++ + Sbjct: 65 GGVFLFVGTKKQAQDSIAEEATRAGQYYVNQRWLGGTLTNWSTMQSRIKRLKQLKQMSED 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + ++ DKL++ GI DM +PD++FVVD +EK+A+ EA L IP+ Sbjct: 125 GTFDVLPKKEVALLTKEMDKLEKFFGGIEDMPRIPDVLFVVDPKKEKIAVHEANILGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN++PD +D VIP NDD+ R+I L +A A ++G G D +S Sbjct: 185 VAMVDTNTDPDPIDVVIPSNDDAIRAIRLIAGAMADAVVEGQQ------GQDDESVE--- 235 Query: 245 VHSKEGMQLEEDSQSSESSVLD 266 V KE E+ S+E + D Sbjct: 236 VDFKENADGSEEIVSAEENPED 257 >gi|256379906|ref|YP_003103566.1| ribosomal protein S2 [Actinosynnema mirum DSM 43827] gi|255924209|gb|ACU39720.1| ribosomal protein S2 [Actinosynnema mirum DSM 43827] Length = 304 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 118/256 (46%), Positives = 166/256 (64%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLMQTLTYIDRAFEFVRET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILF+ TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGSILFIGTKKQAQEAIANEALRVGMPFVNQRWLGGMLTNFSTVHKRLQRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 QGFTKKE L + R++DKL+R L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 EQTGGFQGFTKKEILMMNREKDKLERTLGGIRDMSKVPSAVWIVDTKKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA++DTN +PD VDY IPGNDD+ RS AL +VA AA G+ + + A Sbjct: 181 IPIVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMSRSGVRTGNAGGAE 240 Query: 242 ETVVHSKEGMQLEEDS 257 + + E + E Sbjct: 241 KPEPGTDEPLAEWEQE 256 >gi|259501575|ref|ZP_05744477.1| 30S ribosomal protein S2 [Lactobacillus iners DSM 13335] gi|302191451|ref|ZP_07267705.1| 30S ribosomal protein S2 [Lactobacillus iners AB-1] gi|309804290|ref|ZP_07698367.1| ribosomal protein S2 [Lactobacillus iners LactinV 11V1-d] gi|309805547|ref|ZP_07699592.1| ribosomal protein S2 [Lactobacillus iners LactinV 09V1-c] gi|309807196|ref|ZP_07701170.1| ribosomal protein S2 [Lactobacillus iners LactinV 03V1-b] gi|309808817|ref|ZP_07702702.1| ribosomal protein S2 [Lactobacillus iners LactinV 01V1-a] gi|309809522|ref|ZP_07703380.1| ribosomal protein S2 [Lactobacillus iners SPIN 2503V10-D] gi|312871358|ref|ZP_07731454.1| ribosomal protein S2 [Lactobacillus iners LEAF 3008A-a] gi|312872456|ref|ZP_07732525.1| ribosomal protein S2 [Lactobacillus iners LEAF 2062A-h1] gi|312873340|ref|ZP_07733393.1| ribosomal protein S2 [Lactobacillus iners LEAF 2052A-d] gi|312875783|ref|ZP_07735775.1| ribosomal protein S2 [Lactobacillus iners LEAF 2053A-b] gi|315653421|ref|ZP_07906343.1| 30S ribosomal protein S2 [Lactobacillus iners ATCC 55195] gi|325911886|ref|ZP_08174290.1| ribosomal protein S2 [Lactobacillus iners UPII 143-D] gi|325913465|ref|ZP_08175831.1| ribosomal protein S2 [Lactobacillus iners UPII 60-B] gi|329919855|ref|ZP_08276793.1| ribosomal protein S2 [Lactobacillus iners SPIN 1401G] gi|259167093|gb|EEW51588.1| 30S ribosomal protein S2 [Lactobacillus iners DSM 13335] gi|308163693|gb|EFO65963.1| ribosomal protein S2 [Lactobacillus iners LactinV 11V1-d] gi|308165198|gb|EFO67436.1| ribosomal protein S2 [Lactobacillus iners LactinV 09V1-c] gi|308166417|gb|EFO68622.1| ribosomal protein S2 [Lactobacillus iners LactinV 03V1-b] gi|308167943|gb|EFO70076.1| ribosomal protein S2 [Lactobacillus iners LactinV 01V1-a] gi|308170194|gb|EFO72229.1| ribosomal protein S2 [Lactobacillus iners SPIN 2503V10-D] gi|311088687|gb|EFQ47139.1| ribosomal protein S2 [Lactobacillus iners LEAF 2053A-b] gi|311091130|gb|EFQ49521.1| ribosomal protein S2 [Lactobacillus iners LEAF 2052A-d] gi|311092038|gb|EFQ50413.1| ribosomal protein S2 [Lactobacillus iners LEAF 2062A-h1] gi|311093110|gb|EFQ51458.1| ribosomal protein S2 [Lactobacillus iners LEAF 3008A-a] gi|315489346|gb|EFU78986.1| 30S ribosomal protein S2 [Lactobacillus iners ATCC 55195] gi|325476392|gb|EGC79554.1| ribosomal protein S2 [Lactobacillus iners UPII 143-D] gi|325477234|gb|EGC80380.1| ribosomal protein S2 [Lactobacillus iners UPII 60-B] gi|328936945|gb|EGG33375.1| ribosomal protein S2 [Lactobacillus iners SPIN 1401G] Length = 257 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 107/256 (41%), Positives = 157/256 (61%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM YIF +RN +IIDL +T+ ML A + D Sbjct: 1 MTVVTMKQLLEAGVHFGHQTRRWDPKMAPYIFTQRNGIYIIDLQKTIKMLDDAYNFMKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V E A R+ QY +N +WLGG +TNW T+ +Q+L+ L+++ Sbjct: 61 ATDGGVFLFVGTKKQAQDAVKEEAIRAGQYFINERWLGGTLTNWSTIQSRVQRLKQLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++ DKL+R L GI DM +PD+MFVVD +EK+A+ EA L Sbjct: 121 SEDGTFELLPKKEVAVLTKELDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++P+ VD VIP NDD+ R+I L +A A I+G Q + + Sbjct: 181 IPVVAMVDTNTDPEPVDVVIPSNDDAIRAIRLIAGAMADAVIEGKQGQDDEKSVEAEFTE 240 Query: 242 ETVVHSKEGMQLEEDS 257 ++ ++ ++ D Sbjct: 241 KSEADDEKSIEEIADE 256 >gi|260654915|ref|ZP_05860403.1| ribosomal protein S2 [Jonquetella anthropi E3_33 E1] gi|260630417|gb|EEX48611.1| ribosomal protein S2 [Jonquetella anthropi E3_33 E1] Length = 272 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 111/268 (41%), Positives = 172/268 (64%), Gaps = 13/268 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L+KA + Sbjct: 1 MAVVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVKGLEKAYDFVRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A+RS QY +N +WLGG++TN++T+ + +Q++ +L+++ Sbjct: 61 GQDDGTLLFVGTKRQAQDTIAEEAQRSGQYYINQRWLGGLLTNFQTLRKRVQRMIELQKI 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ G TKKE + +++ KL++ L GIRDM LPD +FV+D RE +A+ EAR+L Sbjct: 121 DADDDWGEHTKKEISLLRKEKAKLEKYLQGIRDMKKLPDALFVIDPRREDIAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++++VDTN +P+++D+ IPGNDD+ R+I L L+A+A I+G Sbjct: 181 IPVISIVDTNCDPEMIDFPIPGNDDAIRAIKLITGLMANAMIEGR------------GGV 228 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + V K + EE+ +S+ VLD +E Sbjct: 229 DAAVERKPEVAEEENELASDEDVLDMKE 256 >gi|311898625|dbj|BAJ31033.1| putative ribosomal protein S2 [Kitasatospora setae KM-6054] Length = 299 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 110/239 (46%), Positives = 161/239 (67%), Gaps = 2/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLNYIDRAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++L E Sbjct: 61 VAHGGSVLFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELGEI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L ++R+ DKL++ L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 DFTDVAGSGLTKKELLVLQREYDKLEKTLGGIRDMQRVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + D K+ Sbjct: 181 NIPVVAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLKSRAGVAKGDAKA 239 >gi|315650752|ref|ZP_07903804.1| 30S ribosomal protein S2 [Eubacterium saburreum DSM 3986] gi|315486959|gb|EFU77289.1| 30S ribosomal protein S2 [Eubacterium saburreum DSM 3986] Length = 262 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 106/260 (40%), Positives = 162/260 (62%), Gaps = 3/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL Q+V M+ A +SD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQQSVGMVDTAYNAMSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK QA D + E A+R Y VN +WLGGM+TN+KT+ I++L LEE+ Sbjct: 61 AKDGGKILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLHQLEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI+DM +PD +F++D +E++ +QEA L Sbjct: 121 SEDGTFDLLPKKEVIKLKKEWEKLEKNLGGIKDMKEIPDAIFIIDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ + DTN +PD +DY+IPGNDD+ R++ L +A A I+ A Q + + Sbjct: 181 IPLIGICDTNCDPDELDYLIPGNDDAIRAVKLIVAKMADAVIE--ANQGEILSTPDSESD 238 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 V S EG + + ++ + Sbjct: 239 SEVDDSLEGNEFAPEKEALD 258 >gi|294500911|ref|YP_003564611.1| 30S ribosomal protein S2 [Bacillus megaterium QM B1551] gi|295706257|ref|YP_003599332.1| 30S ribosomal protein S2 [Bacillus megaterium DSM 319] gi|294350848|gb|ADE71177.1| 30S ribosomal protein S2 [Bacillus megaterium QM B1551] gi|294803916|gb|ADF40982.1| 30S ribosomal protein S2 [Bacillus megaterium DSM 319] Length = 239 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYKFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D V E A R+ Y VN +WLGG +TN+ T+ + I++L+D+E++ Sbjct: 61 AADGGTVLFVGTKKQAQDSVKEEAARAGMYFVNQRWLGGTLTNFSTIQKRIKRLKDIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L++ L GI+DM LPD +F++D +E++A+ EA++L Sbjct: 121 QEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKQLPDALFIIDPRKERIAVAEAKKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIV +VDTN +PD +DYVIP NDD+ R++ L VA A ++ Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKVADAILEAKQ 226 >gi|170078564|ref|YP_001735202.1| 30S ribosomal protein S2 [Synechococcus sp. PCC 7002] gi|238692819|sp|B1XQQ1|RS2_SYNP2 RecName: Full=30S ribosomal protein S2 gi|169886233|gb|ACA99946.1| 30S ribosomal protein S2 [Synechococcus sp. PCC 7002] Length = 256 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 99/256 (38%), Positives = 148/256 (57%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNP+M YI+ RN HIIDL QT ++++A + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPRMAPYIYTSRNGVHIIDLVQTAQLVEQAYTYMKEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA+ + + AKR + +N +WLGGM+TNW+T+ +++L++LE L Sbjct: 61 SENGKHVLFVGTKRQAAGIIAQEAKRCGAFYINQRWLGGMLTNWETIKTRVERLKELEAL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ DKL++ L GI++M +PD++ ++D RE AIQE ++L Sbjct: 121 EESGNLARRPKKEASMLRRELDKLQKYLGGIKNMRKIPDIVVIIDQRREHNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +P VD IP NDD+ RSI L +A A G Q D Sbjct: 181 IPIVSLLDTNCDPQTVDLPIPANDDAIRSIKLIVGKLADAIYAGRHGQPVDDNGDYGDFD 240 Query: 242 ETVVHSKEGMQLEEDS 257 E + + E Sbjct: 241 EAIDEYADETDASESE 256 >gi|294012402|ref|YP_003545862.1| ribosomal protein S2 [Sphingobium japonicum UT26S] gi|292675732|dbj|BAI97250.1| ribosomal protein S2 [Sphingobium japonicum UT26S] Length = 252 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 128/247 (51%), Positives = 177/247 (71%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T+ QL+E+G FGH+ WNP+M+ YIF ERN HI+DLSQTVP+ +AL +S Sbjct: 1 MAAPVVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA D + EAA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATVAAGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+R+KL+ +L GIRDM G+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EKLSGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD+SR+I L+CD +A+AA G G D + Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAIAAAATKGNRGAQQASGVDLGAL 240 Query: 241 GETVVHS 247 E Sbjct: 241 DEPAAEE 247 >gi|6226896|sp|O31212|RS2_STRCO RecName: Full=30S ribosomal protein S2 gi|4335681|gb|AAC00175.2| ribosomal protein S2 [Streptomyces coelicolor A3(2)] Length = 310 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 110/263 (41%), Positives = 171/263 (65%), Gaps = 4/263 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MAVVTMRELLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLLQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTVMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++ KL++ L GIR+M +P +++VDT +E +A+ EAR+L Sbjct: 121 DFEDVAASGLTKKELLVLSREKAKLEKTLGGIREMSKVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--K 238 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L ++A A +G+ + G K Sbjct: 181 NIPVVAILDTNCDPDEVDHKIPGNDDAIRSVTLLTRVIADAVAEGLIARSGAAGGAKGDK 240 Query: 239 SAGETVVHSKEGMQLEEDSQSSE 261 +AGE + + + E ++ + Sbjct: 241 AAGEPLAAWERDLLEGEKAEKKD 263 >gi|108798961|ref|YP_639158.1| 30S ribosomal protein S2 [Mycobacterium sp. MCS] gi|119868076|ref|YP_938028.1| 30S ribosomal protein S2 [Mycobacterium sp. KMS] gi|126434561|ref|YP_001070252.1| 30S ribosomal protein S2 [Mycobacterium sp. JLS] gi|123070324|sp|Q1BAI2|RS2_MYCSS RecName: Full=30S ribosomal protein S2 gi|166225284|sp|A3PXY4|RS2_MYCSJ RecName: Full=30S ribosomal protein S2 gi|166225285|sp|A1UEI0|RS2_MYCSK RecName: Full=30S ribosomal protein S2 gi|108769380|gb|ABG08102.1| SSU ribosomal protein S2P [Mycobacterium sp. MCS] gi|119694165|gb|ABL91238.1| SSU ribosomal protein S2P [Mycobacterium sp. KMS] gi|126234361|gb|ABN97761.1| SSU ribosomal protein S2P [Mycobacterium sp. JLS] Length = 284 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 116/263 (44%), Positives = 173/263 (65%), Gaps = 1/263 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGSIMFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E LA+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHLAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ + + A Sbjct: 181 IPIIAILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGGGNGNKPEAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 ++ +L + +S ++ Sbjct: 241 AAEPLAEWEQELLAGATASPTAA 263 >gi|313896175|ref|ZP_07829728.1| ribosomal protein S2 [Selenomonas sp. oral taxon 137 str. F0430] gi|320529262|ref|ZP_08030354.1| ribosomal protein S2 [Selenomonas artemidis F0399] gi|312974974|gb|EFR40436.1| ribosomal protein S2 [Selenomonas sp. oral taxon 137 str. F0430] gi|320138892|gb|EFW30782.1| ribosomal protein S2 [Selenomonas artemidis F0399] Length = 236 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 103/224 (45%), Positives = 150/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LF+ TK QA + + E A R+ + VN +WLGGMMTN++T+ + I +L++LE + Sbjct: 61 AQEGKSVLFIGTKKQAQEAIREEALRANMFYVNERWLGGMMTNFQTIQRRIHRLKELEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + TKKE + + +KL+R L GI+DM LP +FVVD +E++A+ EAR+L Sbjct: 121 EENGTFEVLTKKEVQGLRHEMEKLERYLGGIKDMNRLPGALFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEG 224 >gi|260888307|ref|ZP_05899570.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] gi|260861843|gb|EEX76343.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185] Length = 253 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 104/240 (43%), Positives = 156/240 (65%), Gaps = 4/240 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + Sbjct: 14 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVRKVDEAYNFLRSL 73 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A ++ + VN +WLGGM+TN++T+ + I++L+DLE + Sbjct: 74 AEEGKSVLFVGTKKQAQDAVKEEATKAEMFYVNERWLGGMLTNYQTIQKRIRRLKDLERM 133 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L + + KL++ L GI++M LP +FVVD +E++A+ EA++L Sbjct: 134 EEDGTFDVLTKKEVLQLRHEMTKLEKFLGGIKEMNRLPGALFVVDPRKERIAVAEAKKLN 193 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +ASA ++G + GA ++ Sbjct: 194 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSAMASAIVEG---RQGQAGAGEEAQD 250 >gi|94967594|ref|YP_589642.1| 30S ribosomal protein S2 [Candidatus Koribacter versatilis Ellin345] gi|122986448|sp|Q1IU82|RS2_ACIBL RecName: Full=30S ribosomal protein S2 gi|94549644|gb|ABF39568.1| SSU ribosomal protein S2P [Candidatus Koribacter versatilis Ellin345] Length = 301 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 114/278 (41%), Positives = 177/278 (63%), Gaps = 3/278 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M ++A + +SD Sbjct: 1 MANITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVSDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D + E AKR + +N +WLGG++TNW TV +S+++L++L+E+ Sbjct: 61 AAEGKLVLFVGTKRQAQDAIAEEAKRCGMFYINQRWLGGLLTNWVTVQKSVKRLKELDEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +ER+R L+ L GI+++ LPD +FV+D+N+E++A++EAR+L Sbjct: 121 ATDGRYELLPKKEVIKLERERKHLQANLAGIKNLNRLPDCLFVIDSNKEQIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGADTKS 239 IP+VAVVDTN +P VDYVIPGNDD+ R+I LF +A + +G +A + + + Sbjct: 181 IPVVAVVDTNCDPSEVDYVIPGNDDALRAIRLFASKIADSVAEGSQLADKSMIESTNVSN 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 A E + S G E +E + E++ Sbjct: 241 AAEVIPQSYIGDDEEHGLAQPTEEAAPVEEEINMEEVL 278 >gi|300780932|ref|ZP_07090786.1| 30S ribosomal protein S2 [Corynebacterium genitalium ATCC 33030] gi|300532639|gb|EFK53700.1| 30S ribosomal protein S2 [Corynebacterium genitalium ATCC 33030] Length = 326 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 116/283 (40%), Positives = 171/283 (60%), Gaps = 9/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQEPVQEEADRVGMPYVNHRWLGGMLTNFQTVSKRLARMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G KKE L + R+R KL+R L GI DM P +++VDTN+E +A+ EA +L Sbjct: 121 DAAEDGYAGRGKKEILMLNRERTKLERVLGGISDMTKTPSALWIVDTNKEHIAVAEAEKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS-------YM 233 RIP+VA++DTN +PD VDY IPGNDD+ RS+ L +V A + G ++ Sbjct: 181 RIPVVAILDTNCDPDTVDYPIPGNDDAIRSVKLLTHIVGEAVVAGKQQREERQLAKAREA 240 Query: 234 GADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 D +AG T +Q E + +S +V + E Sbjct: 241 AGDAPAAGTTQDAGIAEVQAEAPANASGENVAEAVADVEATET 283 >gi|314957520|gb|EFT01623.1| ribosomal protein S2 [Propionibacterium acnes HL002PA1] Length = 283 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 120/283 (42%), Positives = 180/283 (63%), Gaps = 11/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLHQSLTYIDKAYAFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 61 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 121 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ S++L ++A AA +G+ + + + + Sbjct: 181 KIPVVAILDTNCDPDEVDYAIPGNDDAILSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 240 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 241 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---APEAE 280 >gi|315502463|ref|YP_004081350.1| ribosomal protein s2 [Micromonospora sp. L5] gi|315409082|gb|ADU07199.1| ribosomal protein S2 [Micromonospora sp. L5] Length = 288 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 125/266 (46%), Positives = 174/266 (65%), Gaps = 8/266 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L Sbjct: 61 VAGGGSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEAL 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+ G+TKKE L + R++ KL + L G+RDM LP +++VDT +E +A+ EAR+L Sbjct: 121 GDLSGTAAGYTKKETLQLSREKIKLTKTLGGLRDMQKLPAAVWIVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP++AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG IAR GAD K Sbjct: 181 GIPVIAVLDTNCDPDEVDFPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRNRGADEKP 240 Query: 240 A-----GETVVHSKEGMQLEEDSQSS 260 + + E LEE ++ Sbjct: 241 EAGQVGADEPLAEWERELLEEPKKAD 266 >gi|302865906|ref|YP_003834543.1| 30S ribosomal protein S2 [Micromonospora aurantiaca ATCC 27029] gi|302568765|gb|ADL44967.1| ribosomal protein S2 [Micromonospora aurantiaca ATCC 27029] Length = 289 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 125/266 (46%), Positives = 174/266 (65%), Gaps = 8/266 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL QT+ ++KA + + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLRQTLDYIEKAYEFVRTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R Q VN +WLGGM+TN++TV + +Q++++LE L Sbjct: 61 VAGGGSILFVGTKKQAQEAIAEQATRVGQPYVNHRWLGGMLTNFQTVYKRLQRMKELEAL 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+ G+TKKE L + R++ KL + L G+RDM LP +++VDT +E +A+ EAR+L Sbjct: 121 GDLSGTAAGYTKKETLQLSREKIKLTKTLGGLRDMQKLPAAVWIVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP++AV+DTN +PD VD+ IPGNDD+ RS L +VA+A DG IAR GAD K Sbjct: 181 GIPVIAVLDTNCDPDEVDFPIPGNDDAIRSAELLTKVVAAAVADGLIARSGRNRGADEKP 240 Query: 240 A-----GETVVHSKEGMQLEEDSQSS 260 + + E LEE ++ Sbjct: 241 EAGQVGADEPLAEWERELLEEPKKAD 266 >gi|188586053|ref|YP_001917598.1| SSU ribosomal protein S2P [Natranaerobius thermophilus JW/NM-WN-LF] gi|229470516|sp|B2A380|RS2_NATTJ RecName: Full=30S ribosomal protein S2 gi|179350740|gb|ACB85010.1| SSU ribosomal protein S2P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 232 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM+RYIF ERN +I+DL +TV L +A + + + Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIVDLQKTVKKLDEAYEFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +I+FV TK QA D V A+R + VN +WLGGM+TN++T+S+ + + +LE++ Sbjct: 61 AANGEKIMFVGTKKQAQDAVKNEAERCEMFYVNQRWLGGMLTNFQTISKRLNRFYELEQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE ++ R+ KL + L G+R M LP +FV+D +EK+A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVQSLRREHAKLDKFLGGLRGMEDLPGALFVIDPKKEKIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIV++VDTN +PD VDYVIPGNDD+ R++ L + +A + ++G Sbjct: 181 IPIVSIVDTNCDPDEVDYVIPGNDDAIRAVKLITEKIADSVLEGKQ 226 >gi|114777900|ref|ZP_01452814.1| ribosomal protein S2 [Mariprofundus ferrooxydans PV-1] gi|114551687|gb|EAU54239.1| ribosomal protein S2 [Mariprofundus ferrooxydans PV-1] Length = 252 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 115/252 (45%), Positives = 167/252 (66%), Gaps = 1/252 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YIF +RN HIIDL +T+ M +A + + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIFGKRNGIHIIDLQKTLRMANEAYTFMQELATAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 R+LFV TK QA D + E A R+ Q+ +N +WLGG +TN+ TV QS++K++DL+ + Sbjct: 61 RVLFVGTKRQARDAIKEEACRAGQFYINHRWLGGTLTNFATVQQSVRKMKDLQRQKEEGV 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L ++R+ +KL+R+L GI++M LPD +FVVD +E+LAI+EA++L IP+VA Sbjct: 121 FELLTKKEALQMQRELEKLERSLGGIKEMVNLPDCLFVVDVRKEELAIKEAQKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVD+N NP +DY+IPGNDD+ R++ LFC +A A ++G H D E + Sbjct: 181 VVDSNCNPTGIDYIIPGNDDAIRAVRLFCSKIADALMEGAEAWHMENAEDGADLVEAMSV 240 Query: 247 SKEGMQLEEDSQ 258 S E EE++ Sbjct: 241 SVEETPSEEEAA 252 >gi|320547617|ref|ZP_08041902.1| 30S ribosomal protein S2 [Streptococcus equinus ATCC 9812] gi|320447692|gb|EFW88450.1| 30S ribosomal protein S2 [Streptococcus equinus ATCC 9812] Length = 285 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 100/255 (39%), Positives = 166/255 (65%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D Sbjct: 31 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADAAYEFVRDA 90 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 91 AANDAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM 150 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M++VD ++E++A++EA++L Sbjct: 151 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYIVDPHKEQIAVKEAKKLG 210 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + ++ Sbjct: 211 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADADFGAEAKA 270 Query: 242 ETVVHSKEGMQLEED 256 +++ E ++ + + Sbjct: 271 DSIEEIVEVVEGDNE 285 >gi|251797411|ref|YP_003012142.1| ribosomal protein S2 [Paenibacillus sp. JDR-2] gi|247545037|gb|ACT02056.1| ribosomal protein S2 [Paenibacillus sp. JDR-2] Length = 232 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 154/232 (66%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D V E A+R + +N +WLGG +TN++T+ + I +LR LE+ Sbjct: 61 AAEGGTMLFVGTKKQAQDSVKEEAERCGNFYINQRWLGGTLTNFQTIQKRIDRLRQLEKW 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +++D+L++ L GI+ M GLP +F++D +E++A+ EAR+L Sbjct: 121 SEDGTFEVLPKKEVIILNKEKDRLEKFLGGIKGMKGLPSALFIIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPIV +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEANQGEQTTA 232 >gi|307293421|ref|ZP_07573267.1| ribosomal protein S2 [Sphingobium chlorophenolicum L-1] gi|306881487|gb|EFN12703.1| ribosomal protein S2 [Sphingobium chlorophenolicum L-1] Length = 252 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 128/247 (51%), Positives = 177/247 (71%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T+ QL+E+G FGH+ WNP+M+ YIF ERN HI+DLSQTVP+ +AL +S Sbjct: 1 MAAPVVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA D + EAA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATVAAGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+R+KL+ +L GIRDM G+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EKLSGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD+SR+I L+CD +A+AA G G D + Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAIAAAATKGNRGAQQASGVDLGAL 240 Query: 241 GETVVHS 247 E Sbjct: 241 DEPAAEE 247 >gi|226306029|ref|YP_002765989.1| 30S ribosomal protein S2 [Rhodococcus erythropolis PR4] gi|229491372|ref|ZP_04385196.1| ribosomal protein S2 [Rhodococcus erythropolis SK121] gi|259495222|sp|C0ZY15|RS2_RHOE4 RecName: Full=30S ribosomal protein S2 gi|226185146|dbj|BAH33250.1| 30S ribosomal protein S2 [Rhodococcus erythropolis PR4] gi|229321657|gb|EEN87454.1| ribosomal protein S2 [Rhodococcus erythropolis SK121] Length = 285 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 111/254 (43%), Positives = 162/254 (63%), Gaps = 5/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++Q+L+SG FGH+ WNPKM+R+I +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQMLDSGTHFGHQTRRWNPKMKRFILTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + A R VN +WLGGM+TN+ TV + + +L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQESIASEATRVGMPYVNQRWLGGMLTNFTTVHKRLLRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+ KL R L GIRDM +P +++VDTN+E LA+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAVWIVDTNKEHLAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM----GADT 237 IP++A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ + Sbjct: 181 IPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGVQARAGLSADKDAKPE 240 Query: 238 KSAGETVVHSKEGM 251 AGE + ++ + Sbjct: 241 AGAGEPLAEWEQEL 254 >gi|295696143|ref|YP_003589381.1| ribosomal protein S2 [Bacillus tusciae DSM 2912] gi|295411745|gb|ADG06237.1| ribosomal protein S2 [Bacillus tusciae DSM 2912] Length = 231 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 98/231 (42%), Positives = 153/231 (66%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A Q + Sbjct: 1 MAIISMKQLLEAGVHFGHQTRRWNPKMQKYIFTERNGIYIIDLQKTVKKVEEAYQFVRSL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R + VN +WLGG +TN++T+ + I +L +LE + Sbjct: 61 AEEGKTLLFVGTKKQAQDSVREEAERCGMFYVNQRWLGGTLTNFQTIRRRIDRLHELERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++++L++ L GI+ M LP +FV+D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVNLLRKEKERLEKFLGGIKGMKDLPGALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G + + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADAVLEGSQGEQTA 231 >gi|24380374|ref|NP_722329.1| 30S ribosomal protein S2 [Streptococcus mutans UA159] gi|290581306|ref|YP_003485698.1| 30S ribosomal protein S2 [Streptococcus mutans NN2025] gi|61215769|sp|Q8DS11|RS2_STRMU RecName: Full=30S ribosomal protein S2 gi|24378394|gb|AAN59635.1|AE015025_7 30S ribosomal protein S2 [Streptococcus mutans UA159] gi|254998205|dbj|BAH88806.1| 30S ribosomal protein S2 [Streptococcus mutans NN2025] Length = 261 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 103/251 (41%), Positives = 167/251 (66%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYDFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QAS+ + E A+R+ QY +N +WLGG +TNW T+ + I +L++++++ Sbjct: 61 AANDAVILFVGTKKQASEAIKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L Sbjct: 121 EVDGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDIIYIVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + +A Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDSVEAVEAELAA 240 Query: 241 GETVVHSKEGM 251 GET S E + Sbjct: 241 GETQADSIEEI 251 >gi|288553035|ref|YP_003424970.1| 30S ribosomal protein S2 [Bacillus pseudofirmus OF4] gi|288544195|gb|ADC48078.1| 30S ribosomal protein S2 [Bacillus pseudofirmus OF4] Length = 277 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + D Sbjct: 38 VAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEQAYNFVRDL 97 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V E A+R Y +N +WLGG +TN++T+ + I +L++LE++ Sbjct: 98 AADGGKILFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRITRLKNLEKM 157 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L++ L GI+DM G+PD +FV+D +E++AI EA +L Sbjct: 158 QEDGTFDVLPKKEVILLKKEMDRLEKFLGGIKDMQGIPDALFVIDPRKERIAIAEAHKLN 217 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ + Sbjct: 218 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEATS 263 >gi|319649534|ref|ZP_08003690.1| 30S ribosomal protein S2 [Bacillus sp. 2_A_57_CT2] gi|317398696|gb|EFV79378.1| 30S ribosomal protein S2 [Bacillus sp. 2_A_57_CT2] Length = 233 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 96/229 (41%), Positives = 153/229 (66%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA D V E A RS + VN +WLGG +TN++T+ + I +L+D+E + Sbjct: 61 AGNGGTILFVGTKKQAQDSVKEEAIRSGMFYVNQRWLGGTLTNFETIQKRIARLKDIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++++++L++ L GI+DM LPD +F++D +E++A+ EA +L Sbjct: 121 SEDGTFEVLPKKEVVQLKKEQERLEKFLGGIKDMKSLPDALFIIDPRKERIAVAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQGEE 229 >gi|317129176|ref|YP_004095458.1| ribosomal protein S2 [Bacillus cellulosilyticus DSM 2522] gi|315474124|gb|ADU30727.1| ribosomal protein S2 [Bacillus cellulosilyticus DSM 2522] Length = 232 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 101/232 (43%), Positives = 154/232 (66%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVDEAFNYVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA D V E A+R Y +N +WLGG +TN+ T+ + I +L+DLE + Sbjct: 61 AGQGGTMLFVGTKKQAQDAVKEEAERCGMYFINQRWLGGTLTNFDTIRKRIGRLKDLERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L++ L GI+DM LPD +F++D +E++A+ EAR+L Sbjct: 121 QEDGTFEVLPKKEVVLLKKEMDRLEKFLGGIKDMDKLPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A I+ + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVRLLTAKMADAIIEANQGEETTA 232 >gi|269797917|ref|YP_003311817.1| ribosomal protein S2 [Veillonella parvula DSM 2008] gi|269094546|gb|ACZ24537.1| ribosomal protein S2 [Veillonella parvula DSM 2008] Length = 281 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 104/261 (39%), Positives = 162/261 (62%), Gaps = 1/261 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + Sbjct: 61 ASQGEVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + + DKL++ L GI+DM +P +FVVD +EK+AI EA++L Sbjct: 121 AEDGTFEVLPKKEVIGLRHEMDKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA VDTN +PD VD+ IP NDD+ R++ L +A A ++G + K+ Sbjct: 181 IPVVATVDTNCDPDEVDFPIPANDDAIRAVKLLAGKMADAVLEGRQGESFEENVAVKAGT 240 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 VV + E+ S ++ Sbjct: 241 NKVVDVAYAKREAEEGMSVKA 261 >gi|223044236|ref|ZP_03614273.1| ribosomal protein S2 [Staphylococcus capitis SK14] gi|314933435|ref|ZP_07840800.1| ribosomal protein S2 [Staphylococcus caprae C87] gi|222442386|gb|EEE48494.1| ribosomal protein S2 [Staphylococcus capitis SK14] gi|313653585|gb|EFS17342.1| ribosomal protein S2 [Staphylococcus caprae C87] Length = 262 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 104/267 (38%), Positives = 172/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ E + E+ + E++ ++ Sbjct: 236 EQNINLDEKEESEQAETTEENTSVESN 262 >gi|319401454|gb|EFV89664.1| ribosomal protein S2 [Staphylococcus epidermidis FRI909] Length = 262 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 104/267 (38%), Positives = 172/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEEGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ E + E+ + E++ ++ Sbjct: 236 EQNINLDEKEESEQAETTEENTSVESN 262 >gi|307151121|ref|YP_003886505.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 7822] gi|306981349|gb|ADN13230.1| ribosomal protein S2 [Cyanothece sp. PCC 7822] Length = 270 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 103/255 (40%), Positives = 149/255 (58%), Gaps = 6/255 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +LLESGV FGH+ WNPKM YI+ RN HIIDL QT ++++A + Sbjct: 1 MSVVTLNELLESGVHFGHQTRRWNPKMAPYIYTARNGVHIIDLVQTAELIEEAYDYMRKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R VN +WLGGM+TNW+T+ ++L++LEE+ Sbjct: 61 ADQGKKFLFVGTKRQAAGIIAQEALRCGSNFVNQRWLGGMLTNWETIRTRAERLKELEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD++ ++D RE A+QE ++L Sbjct: 121 EESGAISRRPKKEAAVLRRELFKLQKYLGGIKTMRRIPDVVVIIDLKREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA++DTN +PD VD IPGNDD+ RSI L +A A +G +H + D Sbjct: 181 IPIVALLDTNCDPDYVDVPIPGNDDAIRSIKLIIGKLADAIYEG---RHGEVAPDEDY-- 235 Query: 242 ETVVHSKEGMQLEED 256 E + E EED Sbjct: 236 EDFDENLENDYEEED 250 >gi|225181368|ref|ZP_03734812.1| ribosomal protein S2 [Dethiobacter alkaliphilus AHT 1] gi|225167949|gb|EEG76756.1| ribosomal protein S2 [Dethiobacter alkaliphilus AHT 1] Length = 251 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 101/238 (42%), Positives = 158/238 (66%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ + + Sbjct: 1 MPVVSMKQLLEAGVHFGHQTRRWNPKMKTYIFTERNGIYIIDLQKTVRMIDDCYNFVKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+I+FV TK QA + + A+R + VN +WLGGM+TN+KT+ + +L +LE++ Sbjct: 61 AADGGKIMFVGTKKQAQESIQTEAERCGMFYVNQRWLGGMLTNFKTIRNRVNRLIELEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + + DKL + L G+R+M LPD +F+VD +EK+A+ EAR+L Sbjct: 121 EEDGVFEVLPKKEVIKLRHEYDKLNKFLSGVRNMKSLPDALFIVDPRKEKIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPIVA+VDTN +PD +DY+IPGNDD+ R++ L +A A ++G+ + ++ + ++ Sbjct: 181 IPIVAIVDTNCDPDEIDYIIPGNDDAIRAVKLISGRMADAVLEGLEGRQDHVVVEDEA 238 >gi|254511567|ref|ZP_05123634.1| ribosomal protein S2 [Rhodobacteraceae bacterium KLH11] gi|221535278|gb|EEE38266.1| ribosomal protein S2 [Rhodobacteraceae bacterium KLH11] Length = 260 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 135/240 (56%), Positives = 180/240 (75%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQ + DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQTQRWNPRMGPFIYGSRNGIHIMDLTQTVPMLDQALQAVRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA+ + +AA++SAQY +N +WLGG +TNWKTVSQSI +L ++E + Sbjct: 61 RVLFVGTKRQAAQPIADAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLNQIDEAMESGA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER + KL+ +L GIR+MGG+PDL+FV+D +E LAI EA +L IP+VAV Sbjct: 121 EGLTKKERLGMERDQQKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 VDTN +PD VDY+IPGNDD++R+IAL+CDL A AA+DG+ Q G D + E V Sbjct: 181 VDTNCSPDGVDYIIPGNDDAARAIALYCDLAARAALDGMTAQMGAAGVDLGAFEEAPVEE 240 >gi|288906353|ref|YP_003431575.1| ribosomal protein S2 [Streptococcus gallolyticus UCN34] gi|325979365|ref|YP_004289081.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733079|emb|CBI14660.1| ribosomal protein S2 [Streptococcus gallolyticus UCN34] gi|325179293|emb|CBZ49337.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 255 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 101/255 (39%), Positives = 168/255 (65%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADAAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + +++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADVDFASEAQA 240 Query: 242 ETVVHSKEGMQLEED 256 +++ E ++ + + Sbjct: 241 DSIEEIVEVVEGDNE 255 >gi|327475253|gb|AEA77221.1| SSU ribosomal protein S2p [Bacillus aquimaris] Length = 235 Score = 325 bits (834), Expect = 3e-87, Method: Composition-based stats. Identities = 95/235 (40%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYKFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V E A+R+ Y +N +WLGG +TN++T+ + I +L+++E++ Sbjct: 61 AGNGGKVLFVGTKKQAQESVKEEAERAGMYYINQRWLGGTLTNFETIQKRISRLKEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L + L GI+DM LPD +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMNTLPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQGEEAAVAAE 235 >gi|77919517|ref|YP_357332.1| 30S ribosomal protein S2 [Pelobacter carbinolicus DSM 2380] gi|123743012|sp|Q3A395|RS2_PELCD RecName: Full=30S ribosomal protein S2 gi|77545600|gb|ABA89162.1| SSU ribosomal protein S2P [Pelobacter carbinolicus DSM 2380] Length = 267 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 111/247 (44%), Positives = 169/247 (68%), Gaps = 1/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + A Q I +T Sbjct: 1 MAQVSMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYQFIRET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFV TK QA + + E R+ Q+ ++++WLGGM+TN+ T+ +SI++L+ +E + Sbjct: 61 VQNGDKVLFVGTKKQAQEAIREETARADQFYIDNRWLGGMLTNFATIKKSIERLKKIEVM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE LN+ER+R+KL++ L GI+ M LP +FV+D +E +A++EAR+L Sbjct: 121 AQDGTYELLTKKEALNLEREREKLEKTLGGIKGMNKLPGAIFVIDPKKETIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +PD +DY+IPGNDD+ R+I LF +A A IDG + + + A++ A Sbjct: 181 IPVVAVVDTNCDPDDIDYIIPGNDDAIRAIRLFAAKMADACIDGAQAREAAIRAESDKAE 240 Query: 242 ETVVHSK 248 V + Sbjct: 241 TDKVEVE 247 >gi|295396353|ref|ZP_06806519.1| 30S ribosomal protein S2 [Brevibacterium mcbrellneri ATCC 49030] gi|294970793|gb|EFG46702.1| 30S ribosomal protein S2 [Brevibacterium mcbrellneri ATCC 49030] Length = 313 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 123/277 (44%), Positives = 178/277 (64%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL QT+ + A + I +T Sbjct: 1 MAVVTTRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLGYIDTAFEFIKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+FV TK QA + + E A+R Q VN +WLGGM+TN++T+S +++L++LEE Sbjct: 61 VAHGGSIMFVGTKKQAQEAIAEQAQRVGQPFVNQRWLGGMLTNFQTISGRLRRLKELEEI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R+++KL+R L GIRDM P +++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSGHTKKELLILSREKEKLERTLGGIRDMQRTPSAVWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY-------M 233 IPIV ++DTN +PD VDY IPGNDDS RS+AL +VA A +G+ ++HS Sbjct: 181 GIPIVGILDTNCDPDEVDYPIPGNDDSIRSVALLTRVVADAVAEGLLKRHSSDEGEKNVS 240 Query: 234 GADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 D + E EG + +D+++ E+ + +E Sbjct: 241 AVDVEPMPEWERELLEG-KGGDDAKADEAKAEETKEA 276 >gi|15614990|ref|NP_243293.1| 30S ribosomal protein S2 [Bacillus halodurans C-125] gi|20139933|sp|Q9KA63|RS2_BACHD RecName: Full=30S ribosomal protein S2 gi|10175047|dbj|BAB06146.1| 30S ribosomal protein S2 [Bacillus halodurans C-125] Length = 244 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG++LFV TK QA D V E A+R Y +N +WLGG +TN++T+ + I +L+ LE++ Sbjct: 61 AADGGKVLFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRIDRLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ ++L++ L GI+DM LPD +FV+D +E++AI EA +L Sbjct: 121 EEDGTFDVLPKKEVILLKKEMERLEKFLGGIKDMNSLPDALFVIDPRKERIAIAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++ + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVEATS 226 >gi|70726659|ref|YP_253573.1| 30S ribosomal protein S2 [Staphylococcus haemolyticus JCSC1435] gi|123734985|sp|Q4L5V8|RS2_STAHJ RecName: Full=30S ribosomal protein S2 gi|68447383|dbj|BAE04967.1| 30S ribosomal protein S2 [Staphylococcus haemolyticus JCSC1435] Length = 262 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 106/267 (39%), Positives = 171/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GGR+LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGRVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQGV-----SNDEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ E + +E + E++ ++ Sbjct: 236 EQNINLDEKEESQEAESTEENTTVESN 262 >gi|104774224|ref|YP_619204.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514312|ref|YP_813218.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274956|sp|Q049U2|RS2_LACDB RecName: Full=30S ribosomal protein S2 gi|123378422|sp|Q1G9N6|RS2_LACDA RecName: Full=30S ribosomal protein S2 gi|103423305|emb|CAI98146.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093627|gb|ABJ58780.1| SSU ribosomal protein S2P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 253 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 105/259 (40%), Positives = 157/259 (60%), Gaps = 7/259 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ W+PKM+ YIF +RN+ +IIDL +T+ ML A + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNDIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ Sbjct: 61 AQDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L Sbjct: 121 AEDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A I+G GAD Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGTMADAVIEGKQ------GADNADVE 234 Query: 242 ETVVHSKEGMQLEEDSQSS 260 + + S E EE + Sbjct: 235 KELSESVEENSAEEVDDAE 253 >gi|312898659|ref|ZP_07758049.1| ribosomal protein S2 [Megasphaera micronuciformis F0359] gi|310620578|gb|EFQ04148.1| ribosomal protein S2 [Megasphaera micronuciformis F0359] Length = 284 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 98/237 (41%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV L +A D Sbjct: 13 MAVVSMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKLDEAYNFARDL 72 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG++LFV TK QA + + A+R + VN +WLGGM+TN++T+ + +++L+ LE+ Sbjct: 73 ASEGGKVLFVGTKKQAQESIKNEAERCGMFFVNERWLGGMLTNFQTIEKRVKRLKTLEKQ 132 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++ + +KL++ L GI++M +PD +FV+D +E++AI EAR+L Sbjct: 133 AEDGTFDVLPKKEVTLLKHEMEKLQKYLGGIKEMKKVPDALFVIDPKKEEIAIAEARKLN 192 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IPI+A VDTN +PDL+DY IP NDD+ R++ L +A A ++G + T+ Sbjct: 193 IPIIATVDTNCDPDLIDYPIPANDDAIRAVKLLTGKIADAIMEGRQGESMDGEEQTE 249 >gi|227890577|ref|ZP_04008382.1| 30S ribosomal protein S2 [Lactobacillus salivarius ATCC 11741] gi|301299671|ref|ZP_07205927.1| ribosomal protein S2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|227867515|gb|EEJ74936.1| 30S ribosomal protein S2 [Lactobacillus salivarius ATCC 11741] gi|300214334|gb|ADJ78750.1| 30S ribosomal protein S2 [Lactobacillus salivarius CECT 5713] gi|300852739|gb|EFK80367.1| ribosomal protein S2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 265 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 106/265 (40%), Positives = 168/265 (63%), Gaps = 6/265 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A I D Sbjct: 1 MAVITMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLIDDAYDFIKDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK QA + + E AKR+ QY VN +WLGG +TNW T+ + I+KL++++ + Sbjct: 61 ASDDGVVLFVGTKKQAQEAIEEEAKRAGQYYVNHRWLGGTLTNWNTIQKRIKKLKEIKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++RD+L++ L GI DM +PD++F+VD +E++A++EA++L Sbjct: 121 AEDGTFDRLPKKEVALLIKQRDRLEKFLGGIEDMPRIPDVLFIVDPRKERIAVKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH-----SYMGAD 236 IPIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G + + Sbjct: 181 IPIVAMVDTNADPDEIDVKIPSNDDAIRAVRLITSKMADAIIEGRQGEDDAPVTEDTFEN 240 Query: 237 TKSAGETVVHSKEGMQLEEDSQSSE 261 T +++ E ++ + DS +E Sbjct: 241 TDDQVDSIEDIVEAVEGDNDSTDAE 265 >gi|260907243|ref|ZP_05915565.1| ribosomal protein S2 [Brevibacterium linens BL2] Length = 326 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 115/254 (45%), Positives = 170/254 (66%), Gaps = 5/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TIRQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL +++ + A + + +T Sbjct: 1 MAVVTIRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLGYIDTAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG ILFV TK QA + + E AKR Q VN +WLGGM+TN++T+S +++L++LEE+ Sbjct: 61 VTHGGSILFVGTKKQAQESIAEQAKRVGQPYVNQRWLGGMLTNFQTISLRLRRLKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM P +++VDT +E LA+ EAR+L Sbjct: 121 DFDDVAGSSHTKKELLILRREKDKLEKTLGGIRDMQRTPSAVWIVDTKKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY---MGADT 237 IP++A++DTN +PD V+Y IPGNDD+ RS++L ++A A +G+ +HS G Sbjct: 181 GIPVIAILDTNCDPDDVNYPIPGNDDAIRSVSLLTRVIADAVAEGLIARHSSDDDSGEKN 240 Query: 238 KSAGETVVHSKEGM 251 SA E + + + Sbjct: 241 VSAVEPMPEWEREL 254 >gi|255003257|ref|ZP_05278221.1| 30S ribosomal protein S2 [Anaplasma marginale str. Puerto Rico] gi|255004385|ref|ZP_05279186.1| 30S ribosomal protein S2 [Anaplasma marginale str. Virginia] Length = 328 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 128/280 (45%), Positives = 181/280 (64%), Gaps = 6/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 5 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 64 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 65 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 124 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 125 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 184 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 185 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 244 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA----VVPEL 276 G V S G + ++ G A +PE+ Sbjct: 245 GSDVAESYAGTAADAGHTPVSETLSAGGPTAGASPYIPEV 284 >gi|222475272|ref|YP_002563688.1| 30S ribosomal protein S2 (rpsB) [Anaplasma marginale str. Florida] gi|222419409|gb|ACM49432.1| 30S ribosomal protein S2 (rpsB) [Anaplasma marginale str. Florida] Length = 365 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 128/280 (45%), Positives = 181/280 (64%), Gaps = 6/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 42 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 101 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 102 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 161 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 162 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 221 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 222 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 281 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA----VVPEL 276 G V S G + ++ G A +PE+ Sbjct: 282 GSDVAESYAGTAADAGHTPVSETLSAGGPTAGASPYIPEV 321 >gi|161544987|ref|YP_153979.2| 30S ribosomal protein S2 [Anaplasma marginale str. St. Maries] gi|209573722|sp|Q5PAF6|RS2_ANAMM RecName: Full=30S ribosomal protein S2 Length = 327 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 128/280 (45%), Positives = 181/280 (64%), Gaps = 6/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 4 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 64 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 124 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 184 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 243 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA----VVPEL 276 G V S G + ++ G A +PE+ Sbjct: 244 GSDVAESYAGTAADAGHTPVSETLSAGGPTAGASPYIPEV 283 >gi|56388137|gb|AAV86724.1| 30S ribosomal protein S2 [Anaplasma marginale str. St. Maries] Length = 365 Score = 325 bits (833), Expect = 4e-87, Method: Composition-based stats. Identities = 128/280 (45%), Positives = 181/280 (64%), Gaps = 6/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 42 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 101 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ V E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 102 DVVLKRGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 161 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+N FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 162 RLINNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 221 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + + Sbjct: 222 KIPVVAILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRSDLASSGVNIAAK 281 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA----VVPEL 276 G V S G + ++ G A +PE+ Sbjct: 282 GSDVAESYAGTAADAGHTPVSETLSAGGPTAGASPYIPEV 321 >gi|315924465|ref|ZP_07920687.1| 30S ribosomal protein S2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622344|gb|EFV02303.1| 30S ribosomal protein S2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 265 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 106/229 (46%), Positives = 155/229 (67%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL QTV M+ A + D Sbjct: 18 MAIVTMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQQTVKMIGDAYNFVRDL 77 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + + AKRS + VN +WLGG +TNW+T+++ I +L+DL+ + Sbjct: 78 AAEGKDILFVGTKKQAQNSIENEAKRSGSFYVNHRWLGGTLTNWETINKRINRLKDLKRM 137 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + R+R+KL++ L GI DM G+P M ++D +E++AIQEA +L Sbjct: 138 EEDGTFDLLPKKEVIGLRREREKLEKFLGGIEDMHGMPGAMVIIDCKKERIAIQEAHKLG 197 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+++VDTN +PD VDY+IPGNDD+ R++AL ++A A ++G + Sbjct: 198 IPIISIVDTNCDPDDVDYIIPGNDDAIRAVALILRVLADAVLEGKQGEQ 246 >gi|306832396|ref|ZP_07465549.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425436|gb|EFM28555.1| 30S ribosomal protein S2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 275 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 101/255 (39%), Positives = 168/255 (65%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + D Sbjct: 21 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADAAYEFVRDA 80 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 81 AANDAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM 140 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 141 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 200 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + +++ Sbjct: 201 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADVDFASEAQA 260 Query: 242 ETVVHSKEGMQLEED 256 +++ E ++ + + Sbjct: 261 DSIEEIVEVVEGDNE 275 >gi|123443485|ref|YP_001007458.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160592|ref|YP_004297169.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166226768|sp|A1JP82|RS2_YERE8 RecName: Full=30S ribosomal protein S2 gi|122090446|emb|CAL13314.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318606930|emb|CBY28428.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica subsp. palearctica Y11] gi|325664822|gb|ADZ41466.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859599|emb|CBX69939.1| 30S ribosomal protein S2 [Yersinia enterocolitica W22703] Length = 241 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ + VA A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVADAVKEGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|165939849|ref|ZP_02228389.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275] gi|167399959|ref|ZP_02305477.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|270487340|ref|ZP_06204414.1| ribosomal protein S2 [Yersinia pestis KIM D27] gi|21960060|gb|AAM86687.1|AE013914_7 30S ribosomal subunit protein S2 [Yersinia pestis KIM 10] gi|45437440|gb|AAS62991.1| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str. 91001] gi|165912252|gb|EDR30889.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275] gi|167050667|gb|EDR62075.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|270335844|gb|EFA46621.1| ribosomal protein S2 [Yersinia pestis KIM D27] Length = 269 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 113/243 (46%), Positives = 164/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 27 LIMATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELT 86 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 87 KISSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 146 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA Sbjct: 147 IQSQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANN 206 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 207 LGIPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGRSQDLAVQAEESFV 266 Query: 240 AGE 242 E Sbjct: 267 EAE 269 >gi|332994204|gb|AEF04259.1| ribosomal protein S2 [Alteromonas sp. SN2] Length = 243 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 118/248 (47%), Positives = 167/248 (67%), Gaps = 6/248 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ YIF RN HII+L +TVP+ AL +S Sbjct: 1 MANVSMRDMLKAGVHFGHQTRYWNPKMKPYIFGARNKVHIINLEKTVPLFNNALNYLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK A D V +AA + Q+ VN +WLGGM+TNWKTV QSI++L++LE+ Sbjct: 61 ASKKGKILFVGTKRAAGDAVKDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQK 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L ++R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI EAR L Sbjct: 121 SQDGTFEKLTKKEALMLQREMEKLENSLGGIKDMGGLPDAIFVVDADHEHIAITEARNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTNSNPD VDY+IPGNDD+ R++ L+ D A+A I G + ++ Sbjct: 181 IPVVGVVDTNSNPDGVDYIIPGNDDAIRAVQLYLDAAANAVISGR-----ESNLEAQAEQ 235 Query: 242 ETVVHSKE 249 + V + E Sbjct: 236 DDFVEAAE 243 >gi|90961487|ref|YP_535403.1| 30S ribosomal protein S2 [Lactobacillus salivarius UCC118] gi|123086806|sp|Q1WUL5|RS2_LACS1 RecName: Full=30S ribosomal protein S2 gi|90820681|gb|ABD99320.1| SSU ribosomal protein S2P [Lactobacillus salivarius UCC118] Length = 265 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 107/265 (40%), Positives = 165/265 (62%), Gaps = 9/265 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A I D Sbjct: 1 MAVITMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLIDDAYDFIKDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK QA + + E AKR+ QY VN +WLGG +TNW T+ + I+KL++++ + Sbjct: 61 ASDDGVVLFVGTKKQAQEAIEEEAKRAGQYYVNHRWLGGTLTNWNTIQKRIKKLKEIKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++RD+L++ L GI DM +PD++F+VD +E++A++EA++L Sbjct: 121 AEDGTFDRLPKKEVALLIKQRDRLEKFLGGIEDMPRIPDVLFIVDPRKERIAVKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY--------M 233 IPIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G + Sbjct: 181 IPIVAMVDTNADPDEIDVKIPSNDDAIRAVRLITSKMADAIIEGRQGEDDAPVTEDTFEN 240 Query: 234 GADTKSAGETVVHSKEGMQLEEDSQ 258 D + E +V EG D++ Sbjct: 241 TDDQVDSIEDIVEVVEGDNDSTDAE 265 >gi|163731851|ref|ZP_02139298.1| 30S ribosomal protein S2 [Roseobacter litoralis Och 149] gi|161395305|gb|EDQ19627.1| 30S ribosomal protein S2 [Roseobacter litoralis Och 149] Length = 257 Score = 325 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 130/232 (56%), Positives = 175/232 (75%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNP+M +I+ RN HI+DL+QTVPML +ALQ I DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQAIRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + +AA++ AQY +N +WLGG +TNW+TVSQSI +L+ ++E + Sbjct: 61 SILFVGTKRQAQQPIADAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAIDEQSERGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER + KL+ +L GIR+MGG PDL+FV+D +E LA+ EA +L IP+VAV Sbjct: 121 EGLTKKERLGMERDQGKLQSSLGGIREMGGRPDLIFVIDVKKEALAVAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 VDTN PD +DY+IPGNDD+SR+I+L+CDL A AA+DG++ Q G D + Sbjct: 181 VDTNCPPDGIDYIIPGNDDASRAISLYCDLAARAALDGMSAQLGAAGVDLGA 232 >gi|86608999|ref|YP_477761.1| 30S ribosomal protein S2 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123737998|sp|Q2JLB3|RS2_SYNJB RecName: Full=30S ribosomal protein S2 gi|86557541|gb|ABD02498.1| ribosomal protein S2 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 264 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 100/236 (42%), Positives = 142/236 (60%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ WNPKM YIF ERN HIIDL QT L +A + + D Sbjct: 1 MSVVSLPQLLEAGVHFGHKASRWNPKMRPYIFTERNGIHIIDLVQTARYLNEAYEYVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RG R LFV TK QA+ + + A+R Y VN +WLGGM+TNW T+ I +L+++EE+ Sbjct: 61 ADRGWRFLFVGTKRQAAGIIAQEARRCGSYYVNQRWLGGMLTNWATIKTRIDRLKEIEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K+E + R+ +L++ L GI+ M LPD + +VD RE A+QE +L Sbjct: 121 ESSGLLDRLPKQEASRLRRELARLEKYLGGIKTMRKLPDAVIIVDQRREANAVQECIKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IPI++++DTN +PDL D IP NDD+ R+I L +A A +G Q + D Sbjct: 181 IPIISLLDTNCDPDLSDIFIPSNDDAIRAIKLIVGKLADAIYEGRHGQLDTVEEDE 236 >gi|56552052|ref|YP_162891.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241762006|ref|ZP_04760090.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752415|ref|YP_003225308.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|7388197|sp|Q9X5E7|RS2_ZYMMO RecName: Full=30S ribosomal protein S2 gi|4768860|gb|AAD29654.1|AF124757_14 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4] gi|56543626|gb|AAV89780.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241373472|gb|EER63059.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258551778|gb|ACV74724.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 250 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 125/238 (52%), Positives = 175/238 (73%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P T++ LL+ G FGH+ WNPKM+ YIF +RN HI+DLSQTVP+ +AL IS Sbjct: 1 MAVPTVTMQSLLDVGAHFGHQTHRWNPKMKPYIFGDRNGIHIMDLSQTVPLFTRALDFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA + + +AA+RS Q+ VN +WLGGM+TNW+T+S SI++L+ LE Sbjct: 61 QTVAHGGKVLFVGTKRQAQEPIADAARRSGQFFVNHRWLGGMLTNWRTISGSIKRLKSLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+RDKL+ +L GIRDMG +PD+MFVVD N+E+LAI+EA L Sbjct: 121 EKLSGDTAGFTKKEILQLTRERDKLELSLGGIRDMGTIPDIMFVVDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP+VA++D+N +PD + + IP NDD++R++ +CD +A AA G + +G D Sbjct: 181 GIPVVAILDSNVSPDGIAFPIPANDDAARAVRYYCDAIAEAATRGDQQNRQELGEDLG 238 >gi|89098612|ref|ZP_01171494.1| 30S ribosomal protein S2 [Bacillus sp. NRRL B-14911] gi|89086574|gb|EAR65693.1| 30S ribosomal protein S2 [Bacillus sp. NRRL B-14911] Length = 233 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 97/229 (42%), Positives = 152/229 (66%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNYVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA D V E A RS Y VN +WLGG +TN++T+ + I +L+D+E + Sbjct: 61 AGNGGTILFVGTKKQAQDSVKEEALRSGMYFVNQRWLGGTLTNFETIQKRITRLKDIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +++++L++ L GI+DM LPD +F++D +E++A+ EA +L Sbjct: 121 SEDGTFEVLPKKEVVQLRKEQERLEKFLGGIKDMKTLPDALFIIDPRKERIAVAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQGEE 229 >gi|108758377|ref|YP_633494.1| 30S ribosomal protein S2 [Myxococcus xanthus DK 1622] gi|122980824|sp|Q1D1H9|RS2_MYXXD RecName: Full=30S ribosomal protein S2 gi|108462257|gb|ABF87442.1| ribosomal protein S2 [Myxococcus xanthus DK 1622] Length = 312 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 112/238 (47%), Positives = 160/238 (67%), Gaps = 1/238 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV M + A + ++D AR Sbjct: 7 ITMRQLLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVVMARSAFRFVADITAR 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D V E A R+ Q+ V S+WLGG +TN+KT+ Q I +L+ LE++ + Sbjct: 67 GGSVLFVGTKKQAQDVVREEASRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAED 126 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE +ER+R+KL++ L G+++M LP +FV+D +E +AI EA RL IP+ Sbjct: 127 GTFERLPKKEVAQLEREREKLEKNLGGVKEMSKLPRCVFVIDPKKEHIAIHEAGRLGIPV 186 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 + +VDTN +PD +D+VIPGNDD+ RSI LF +A A ++G AR + A+ E Sbjct: 187 IGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAEACLEGAARYRASGAAERDEQEE 244 >gi|94496944|ref|ZP_01303518.1| ribosomal protein S2 [Sphingomonas sp. SKA58] gi|94423620|gb|EAT08647.1| ribosomal protein S2 [Sphingomonas sp. SKA58] Length = 252 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 127/252 (50%), Positives = 178/252 (70%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P ++ QL+E+G FGH+ WNP+M+ YIF ERN HI+DLSQTVP+ +AL +S Sbjct: 1 MATPVVSMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TVA GG++LFV TK QA D + +AA++S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATVAAGGKVLFVGTKRQAQDPIADAARKSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + GFTKKE L + R+R+KL+ +L GIRDM G+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EKLSGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD+SR+I L+C+ VA+AA G G D + Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDASRAIRLYCEAVAAAATKGNRGAQQASGVDIGAL 240 Query: 241 GETVVHSKEGMQ 252 E V Sbjct: 241 DEPEVEQVAAEA 252 >gi|148267746|ref|YP_001246689.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus JH9] gi|150393804|ref|YP_001316479.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus JH1] gi|257795688|ref|ZP_05644667.1| 30S ribosomal protein S2 [Staphylococcus aureus A9781] gi|258421674|ref|ZP_05684598.1| SSU ribosomal protein S2 [Staphylococcus aureus A9719] gi|295406192|ref|ZP_06815999.1| 30S ribosomal protein S2 [Staphylococcus aureus A8819] gi|297244420|ref|ZP_06928303.1| 30S ribosomal protein S2 [Staphylococcus aureus A8796] gi|189044992|sp|A5ISE0|RS2_STAA9 RecName: Full=30S ribosomal protein S2 gi|189044993|sp|A6U174|RS2_STAA2 RecName: Full=30S ribosomal protein S2 gi|147740815|gb|ABQ49113.1| SSU ribosomal protein S2P [Staphylococcus aureus subsp. aureus JH9] gi|149946256|gb|ABR52192.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus JH1] gi|257789660|gb|EEV28000.1| 30S ribosomal protein S2 [Staphylococcus aureus A9781] gi|257842360|gb|EEV66785.1| SSU ribosomal protein S2 [Staphylococcus aureus A9719] gi|294968780|gb|EFG44802.1| 30S ribosomal protein S2 [Staphylococcus aureus A8819] gi|297178450|gb|EFH37696.1| 30S ribosomal protein S2 [Staphylococcus aureus A8796] gi|315131049|gb|EFT87033.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus CGS03] gi|329727691|gb|EGG64147.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus 21172] Length = 255 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 104/260 (40%), Positives = 166/260 (63%), Gaps = 6/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVRKVDEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 E + E + EE + E Sbjct: 236 EQNIDLDEKEKSEETEATEE 255 >gi|78042772|ref|YP_360607.1| 30S ribosomal protein S2 [Carboxydothermus hydrogenoformans Z-2901] gi|123770565|sp|Q3AB77|RS2_CARHZ RecName: Full=30S ribosomal protein S2 gi|77994887|gb|ABB13786.1| ribosomal protein S2 [Carboxydothermus hydrogenoformans Z-2901] Length = 232 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 104/229 (45%), Positives = 154/229 (67%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T L++A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAEYIFTDRNGIYIIDLQKTAKKLEEAYSFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG ILFV TK QA D + E A+R + VN +WLGG +TN+KT+ + +++L ++E++ Sbjct: 61 SAQGGTILFVGTKKQAQDAIKEEAERCGMFYVNQRWLGGTLTNFKTIRKRVERLIEIEKM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE I ++++KL R L GI++M LPD +FVVD +EK+A+ EAR+L Sbjct: 121 EQEGALSVLPKKEVAKILKEKEKLSRFLSGIKEMKKLPDALFVVDPRKEKIAVAEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 IPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITSKIADAVIEGRQGEQ 229 >gi|242240397|ref|YP_002988578.1| 30S ribosomal protein S2 [Dickeya dadantii Ech703] gi|242132454|gb|ACS86756.1| ribosomal protein S2 [Dickeya dadantii Ech703] Length = 241 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 117/241 (48%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASRKGKILFVGTKRAASEAVKEAAVNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 AQDGTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VDY+IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDYIIPGNDDAIRAVTLYLSAVATAVREGRSQDLAEQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|311068171|ref|YP_003973094.1| 30S ribosomal protein S2 [Bacillus atrophaeus 1942] gi|310868688|gb|ADP32163.1| 30S ribosomal protein S2 [Bacillus atrophaeus 1942] Length = 243 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V E A RS Y VN +WLGG +TN++T+ + I++L+D+E++ Sbjct: 61 AADGGKILFVGTKKQAQDSVKEEAGRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE + ++++ ++L++ L GI+DM GLPD +F++D +E++A+ EAR+L Sbjct: 121 QENGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 181 IPIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAKQ 226 >gi|242373547|ref|ZP_04819121.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W1] gi|242348910|gb|EES40512.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W1] Length = 262 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 107/262 (40%), Positives = 168/262 (64%), Gaps = 1/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G + A ++ Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQGVSNEEVAAEQNIN 240 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 E + ED+ S ES+ Sbjct: 241 LDEKEESEQAETTEDNTSVESN 262 >gi|260583808|ref|ZP_05851556.1| 30S ribosomal protein S2 [Granulicatella elegans ATCC 700633] gi|260158434|gb|EEW93502.1| 30S ribosomal protein S2 [Granulicatella elegans ATCC 700633] Length = 256 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 107/258 (41%), Positives = 159/258 (61%), Gaps = 3/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLVDDAYNYMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA D V + A R+ QY VN +WLGGM+TNW T+ I +L+ ++E+ Sbjct: 61 AQDGGIALFVGTKKQAQDAVKDEAIRTGQYYVNHRWLGGMLTNWDTIQTRINRLKKIKEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL++ L GI+DM +PD+MF+VD +E++A+QEA +L Sbjct: 121 QEDGTFDVLPKKEVGVLLKELDKLEKYLGGIKDMPRIPDVMFIVDPRKERIAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A ++G Q + D + Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLIVAKMADAFVEG--NQGEDVAVDEEDLD 238 Query: 242 ETVVHSKEGMQLEEDSQS 259 + +E D+ Sbjct: 239 KDTSLEDIEKLVEGDNAE 256 >gi|256390727|ref|YP_003112291.1| 30S ribosomal protein S2 [Catenulispora acidiphila DSM 44928] gi|256356953|gb|ACU70450.1| ribosomal protein S2 [Catenulispora acidiphila DSM 44928] Length = 344 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 173/263 (65%), Gaps = 7/263 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN+ +IIDL Q++ + +A + + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTERNSIYIIDLQQSLSYIDRAYEFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ++F+ TK QA + + E A R VN +WLGGM+TN+ TV + IQ+LR+LEE Sbjct: 61 VAHGGTVMFIGTKKQAQEAIAEQATRVGMPYVNHRWLGGMLTNFSTVYKRIQRLRELEEV 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R+++KL+R L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 DFDDVASSGMTKKELLVMRREKEKLERTLGGIRDMSRVPSAVWIVDTKKEHIAVGEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIP+VA++DTN +PD VDY IPGNDD+ RS+AL +VA A DG+ + + + A Sbjct: 181 RIPVVAILDTNCDPDEVDYKIPGNDDAIRSVALLTRVVADAVADGLMSRAGSKSGEGEQA 240 Query: 241 G-----ETVVHSKEGMQLEEDSQ 258 G E + + + +D++ Sbjct: 241 GAVAVDEPLADWERDLLAVDDAK 263 >gi|310828086|ref|YP_003960443.1| hypothetical protein ELI_2498 [Eubacterium limosum KIST612] gi|308739820|gb|ADO37480.1| hypothetical protein ELI_2498 [Eubacterium limosum KIST612] Length = 259 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 105/229 (45%), Positives = 155/229 (67%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL QTV + A + + Sbjct: 1 MAAVTMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVKKIDVACNFVKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + + AKRS +CVN +WLGG +TN+ T+S+ I++L++L+ + Sbjct: 61 AANGESILFVGTKKQAQTSIEKEAKRSGSFCVNHRWLGGTLTNFTTISKRIERLKELKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R+R+KL++ L GI DM +P M V+D+ +E++AI EA +L Sbjct: 121 EEDGTFELLPKKEVIKLKREREKLQKFLGGIEDMKEMPGAMIVIDSKKERIAIAEAHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIV++VDTN +PD +DYVIPGNDD+ R++AL ++A A I+G + Sbjct: 181 IPIVSIVDTNCDPDEIDYVIPGNDDAIRAVALILGVLADAIIEGKQGEQ 229 >gi|16078712|ref|NP_389531.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. 168] gi|221309527|ref|ZP_03591374.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. 168] gi|221313851|ref|ZP_03595656.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318774|ref|ZP_03600068.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323046|ref|ZP_03604340.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. SMY] gi|296330864|ref|ZP_06873339.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674382|ref|YP_003866054.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii str. W23] gi|321315416|ref|YP_004207703.1| 30S ribosomal protein S2 [Bacillus subtilis BSn5] gi|3123268|sp|P21464|RS2_BACSU RecName: Full=30S ribosomal protein S2; AltName: Full=BS1; AltName: Full=Vegetative protein 209; Short=VEG209 gi|2634021|emb|CAB13522.1| ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. 168] gi|291484204|dbj|BAI85279.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. natto BEST195] gi|296151869|gb|EFG92743.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412626|gb|ADM37745.1| 30S ribosomal protein S2 [Bacillus subtilis subsp. spizizenii str. W23] gi|320021690|gb|ADV96676.1| 30S ribosomal protein S2 [Bacillus subtilis BSn5] Length = 246 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 100/226 (44%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V E A+RS Y VN +WLGG +TN++T+ + I++L+D+E++ Sbjct: 61 AAEGGKILFVGTKKQAQDSVKEEAQRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + ++++ ++L++ L GI+DM LPD +F++D +E++A+ EAR+L Sbjct: 121 QENGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKDLPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 181 IPIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAKQ 226 >gi|85712038|ref|ZP_01043092.1| 30S ribosomal protein S2 [Idiomarina baltica OS145] gi|85694224|gb|EAQ32168.1| 30S ribosomal protein S2 [Idiomarina baltica OS145] Length = 242 Score = 325 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 113/235 (48%), Positives = 158/235 (67%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL + Sbjct: 1 MANVSMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNKIHIINLEKTVPMFNDALSYMQHV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK A++ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNKGKILFVGTKRAAAEPVKEAALNCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL++ L GI++MGGLPD++FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+VVDTNS+PD VDYVIPGNDD+ R++ L+ + A A + + AD Sbjct: 181 IPVVSVVDTNSDPDGVDYVIPGNDDAIRAVQLYLNAAADAIKEAKSAPVEAKDAD 235 >gi|256851269|ref|ZP_05556658.1| ribosomal protein S2 [Lactobacillus jensenii 27-2-CHN] gi|260660693|ref|ZP_05861608.1| ribosomal protein S2 [Lactobacillus jensenii 115-3-CHN] gi|282934737|ref|ZP_06339980.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] gi|297206136|ref|ZP_06923531.1| 30S ribosomal protein S2 [Lactobacillus jensenii JV-V16] gi|256616331|gb|EEU21519.1| ribosomal protein S2 [Lactobacillus jensenii 27-2-CHN] gi|260548415|gb|EEX24390.1| ribosomal protein S2 [Lactobacillus jensenii 115-3-CHN] gi|281301312|gb|EFA93613.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] gi|297149262|gb|EFH29560.1| 30S ribosomal protein S2 [Lactobacillus jensenii JV-V16] Length = 260 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 103/262 (39%), Positives = 156/262 (59%), Gaps = 3/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+ L+ + Sbjct: 61 AQNDGVFLFVGTKKQAQEAIKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL+R L GI DM +PD+MFVVD +EK+A+ EA +L Sbjct: 121 SEDGTFDLLPKKEVALLTKEMDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A I+G +Q + Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPANDDAIRAIRLIAGAMADAVIEG--KQGEDDENVEQEMA 238 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 + S + +EE + ++ Sbjct: 239 DKAAESTDEKSMEEVANEADED 260 >gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 [Escherichia coli CFT073] gi|91070812|gb|ABE05693.1| 30S ribosomal protein S2 [Escherichia coli UTI89] Length = 307 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFV 304 Query: 240 AGE 242 E Sbjct: 305 EAE 307 >gi|163795642|ref|ZP_02189608.1| Ribosomal protein S2 [alpha proteobacterium BAL199] gi|159179241|gb|EDP63774.1| Ribosomal protein S2 [alpha proteobacterium BAL199] Length = 269 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 147/254 (57%), Positives = 190/254 (74%), Gaps = 1/254 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH WNPKME YIF RNN HI+DL QTVPML +ALQ + DT A+GG Sbjct: 1 MRQLLEAGVHFGHHTRRWNPKMESYIFGVRNNVHILDLRQTVPMLHRALQAVRDTTAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 R+LFV TK QASD V EAAKRS QY VN +WLGGM+TNWKT+S SI++LRDLE+LL+ E Sbjct: 61 RVLFVGTKRQASDMVAEAAKRSGQYFVNHRWLGGMLTNWKTISHSIKRLRDLEDLLDSPE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + G TKKE L + R+R+KL+RAL GI++MGGLPD++FV+DTN+E LAIQEA +L IP+VA Sbjct: 121 SLGLTKKETLGLTREREKLERALGGIKEMGGLPDILFVIDTNKEALAIQEANKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 V+D+NS+PD V Y IPGNDD+ R++A +CDL+ASA +DG+ + G D + E Sbjct: 181 VLDSNSSPDGVQYGIPGNDDAMRAVATYCDLIASAVLDGLQAEMMASGDDVGESAEAPSE 240 Query: 247 SKEGMQLEEDSQSS 260 ++ ++ Sbjct: 241 PALEAEVVGAAEEE 254 >gi|331651074|ref|ZP_08352102.1| ribosomal protein S2 [Escherichia coli M718] gi|331051528|gb|EGI23577.1| ribosomal protein S2 [Escherichia coli M718] Length = 306 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 64 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 123 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 124 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 183 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 184 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 243 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 244 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFV 303 Query: 240 AGE 242 E Sbjct: 304 EAE 306 >gi|331640623|ref|ZP_08341771.1| ribosomal protein S2 [Escherichia coli H736] gi|331671677|ref|ZP_08372475.1| ribosomal protein S2 [Escherichia coli TA280] gi|331040369|gb|EGI12576.1| ribosomal protein S2 [Escherichia coli H736] gi|331071522|gb|EGI42879.1| ribosomal protein S2 [Escherichia coli TA280] Length = 306 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 64 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 123 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 124 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 183 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 184 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 243 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 244 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFV 303 Query: 240 AGE 242 E Sbjct: 304 EAE 306 >gi|227114687|ref|ZP_03828343.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227326537|ref|ZP_03830561.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253687337|ref|YP_003016527.1| ribosomal protein S2 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261822599|ref|YP_003260705.1| 30S ribosomal protein S2 [Pectobacterium wasabiae WPP163] gi|259495220|sp|C6DAI3|RS2_PECCP RecName: Full=30S ribosomal protein S2 gi|251753915|gb|ACT11991.1| ribosomal protein S2 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261606612|gb|ACX89098.1| ribosomal protein S2 [Pectobacterium wasabiae WPP163] Length = 241 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 116/241 (48%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VDY+IPGNDD+ R+++L+ VA+A +G ++ + + Sbjct: 181 IPVFAVVDTNSDPDGVDYIIPGNDDAIRAVSLYLSAVATAVREGRSQDLAVQAEEGLVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|117621095|ref|YP_855714.1| ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|330830755|ref|YP_004393707.1| 30S ribosomal protein S2 [Aeromonas veronii B565] gi|166225235|sp|A0KHG3|RS2_AERHH RecName: Full=30S ribosomal protein S2 gi|117562502|gb|ABK39450.1| ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|328805891|gb|AEB51090.1| 30S ribosomal protein S2 [Aeromonas veronii B565] Length = 242 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 114/227 (50%), Positives = 162/227 (71%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNPKM+ YIF R+ HII+L +TVPM A+ IS Sbjct: 1 MAKVSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G++LFV TK AS+ V EAA+R Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AAKKGKVLFVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD++FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+V++VDTNSNPD VDYVIPGNDD+ R++ L+ + A ++ A+ Sbjct: 181 IPVVSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEARAQ 227 >gi|332799208|ref|YP_004460707.1| 30S ribosomal protein S2 [Tepidanaerobacter sp. Re1] gi|332696943|gb|AEE91400.1| ribosomal protein S2 [Tepidanaerobacter sp. Re1] Length = 233 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 105/232 (45%), Positives = 161/232 (69%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV +++A + + + Sbjct: 1 MSIISMKQLLEAGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVKKIEEAYEFVKNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + E A+R + VN +WLGGM+TN+KT+ + I +L +LE++ Sbjct: 61 SAEGGSILFVGTKKQAQESIQEEAQRCGMFYVNQRWLGGMLTNFKTIRKRIDRLHELEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE LN+ ++++L++ L GI+DM LP +F+VD +E++AIQEAR+L+ Sbjct: 121 EEDGLFEILPKKEVLNLLHEKERLEKNLGGIKDMTELPQAVFIVDPRKERIAIQEARKLQ 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPI+A+VDTN +PD VDY+IPGNDD+ R++ L + +A A I+G + Sbjct: 181 IPIIAIVDTNCDPDEVDYIIPGNDDAIRAVKLLTEKIADAVIEGRQGEQMEA 232 >gi|255020967|ref|ZP_05293022.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC 51756] gi|254969572|gb|EET27079.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC 51756] Length = 251 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 106/237 (44%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+ P ++R LLE+G FGH++ W+PKM YIF ERN HII+L T+PML+ AL + Sbjct: 1 MSSPNVSMRALLEAGAHFGHQSRYWHPKMAPYIFGERNRIHIINLEHTLPMLRTALAFLE 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + GR+LFV TK QA + + E A+R + VN +WLGG +TN+KT+ QS+++ +LE Sbjct: 61 QVSRKHGRVLFVGTKRQAREAIEEEARRCGAFYVNQRWLGGTLTNFKTIRQSLRRFEELE 120 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ ++ + TKKE L + R+R+KL+R+L GI+DM G+PD +FV+D E +A+ EA++ Sbjct: 121 QMSVDGTLEKLTKKEVLTLTREREKLERSLGGIKDMTGVPDALFVIDVGHENIAVAEAKK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IP+V VVD+N +P +DY IPGNDD++R+I L+ L A A + G + + D Sbjct: 181 LGIPVVGVVDSNCDPSPIDYPIPGNDDATRAIRLYASLAADAILAGRQGSEADLLDD 237 >gi|332522143|ref|ZP_08398395.1| ribosomal protein S2 [Streptococcus porcinus str. Jelinkova 176] gi|332313407|gb|EGJ26392.1| ribosomal protein S2 [Streptococcus porcinus str. Jelinkova 176] Length = 255 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 167/253 (66%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRITRLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + ++++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDAEVNFESEAKA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|148272563|ref|YP_001222124.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166225260|sp|A5CQS5|RS2_CLAM3 RecName: Full=30S ribosomal protein S2 gi|147830493|emb|CAN01428.1| 30S ribosomal protein S2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 315 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 120/280 (42%), Positives = 181/280 (64%), Gaps = 4/280 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TIRQLL+ GV FGH WNPKM+R+IF ER+ +IIDL Q++ ++ KA + +T Sbjct: 1 MAVVTIRQLLDCGVHFGHPKTRWNPKMKRFIFTERSGIYIIDLQQSLALIDKAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A+R Q VN +WLGG++TN++TV + + +L++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQESIAEQAQRVGQPYVNQRWLGGLLTNFQTVHKRLNRLKELDLV 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +GFTKKE L R+RDKL+++L GIR++ P M+VVDT +E LAI EAR+L Sbjct: 121 DFDDTTRGFTKKELLIQRRERDKLEKSLGGIRNLTKTPSAMWVVDTKKEHLAIDEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ ++DTN +PD V Y IPGNDD+ RS+AL ++A AA +G+ ++H A+ + Sbjct: 181 IPVIGILDTNCDPDEVQYPIPGNDDAIRSVALLTRIIADAAAEGLIQRHQKPDAEGSAPA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPELMS 278 E + + + + D+ +E V + EV+ E S Sbjct: 241 EPLADWERELLEQGDAAKAELPVEENDVDAEVSAKNEAKS 280 >gi|148543916|ref|YP_001271286.1| 30S ribosomal protein S2 [Lactobacillus reuteri DSM 20016] gi|184153312|ref|YP_001841653.1| 30S ribosomal protein S2 [Lactobacillus reuteri JCM 1112] gi|194468462|ref|ZP_03074448.1| ribosomal protein S2 [Lactobacillus reuteri 100-23] gi|325682549|ref|ZP_08162066.1| 30S ribosomal protein S2 [Lactobacillus reuteri MM4-1A] gi|167011236|sp|A5VJC5|RS2_LACRD RecName: Full=30S ribosomal protein S2 gi|229470514|sp|B2G6U1|RS2_LACRJ RecName: Full=30S ribosomal protein S2 gi|148530950|gb|ABQ82949.1| SSU ribosomal protein S2P [Lactobacillus reuteri DSM 20016] gi|183224656|dbj|BAG25173.1| 30S Ribosomal protein S2 [Lactobacillus reuteri JCM 1112] gi|194453315|gb|EDX42213.1| ribosomal protein S2 [Lactobacillus reuteri 100-23] gi|324978388|gb|EGC15338.1| 30S ribosomal protein S2 [Lactobacillus reuteri MM4-1A] Length = 262 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 113/268 (42%), Positives = 170/268 (63%), Gaps = 8/268 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AANDGVALFVGTKKQAQDAIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L Sbjct: 121 SEDGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVMFIVDPHKEQIAVKEAQKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Q + Sbjct: 181 IPIVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAFVEGKQGQDD-------AQQ 233 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 ET + + EDS + + ++G+E Sbjct: 234 ETADDNAANETVSEDSLKNLKNSVEGKE 261 >gi|307129820|ref|YP_003881836.1| 30S ribosomal subunit protein S2 [Dickeya dadantii 3937] gi|306527349|gb|ADM97279.1| 30S ribosomal subunit protein S2 [Dickeya dadantii 3937] Length = 241 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 116/241 (48%), Positives = 165/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VDY+IPGNDD+ R+++L+ VA+A +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDYIIPGNDDAIRAVSLYLGAVATAVREGRSQDLAEQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|238926715|ref|ZP_04658475.1| ribosomal protein S2 [Selenomonas flueggei ATCC 43531] gi|238885247|gb|EEQ48885.1| ribosomal protein S2 [Selenomonas flueggei ATCC 43531] Length = 234 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 103/226 (45%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVDEAYNFLRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LF+ TK QA + + E A R+ + VN +WLGGMMTN++T+ + I +L+ LEE+ Sbjct: 61 AQEGKSVLFIGTKKQAQEAIREEALRANMFYVNERWLGGMMTNFQTIQRRIHRLKTLEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + TKKE + +++KL+R L GI++M LP +FVVD +E++A+ EAR+L Sbjct: 121 EENGTFEVLTKKEVQGLRHEKEKLERYLGGIKEMNRLPGALFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGCMADAVLEGSQ 226 >gi|297588381|ref|ZP_06947024.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 53516] gi|297573754|gb|EFH92475.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 53516] Length = 270 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 104/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV + A + D Sbjct: 1 MSVVSMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKQIDDAYNYVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + AKR Q+ V+ +WLGGM+TN+KT+ I +L L E+ Sbjct: 61 VADGGEVLFVGTKKQAQEAIETEAKRCGQHYVSQRWLGGMLTNYKTIKTRINRLHQLYEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +ER+R+KL++ L GIR M +P ++FVVD +E +A+ EA+ L Sbjct: 121 EEDGTFDLLPKKEVSQLEREREKLEKNLGGIRKMTKMPSVLFVVDPKKEYIAVHEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V +VDTN +PD +D IPGNDD+ R++ L +A A I+ + +++ Sbjct: 181 IPVVGIVDTNCDPDELDIAIPGNDDAIRAVKLLTSTIADAVIEANQGREDSEEVYSETEN 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +T E EED + + + + Sbjct: 241 DTEEFENEESVSEEDLKEFVENSEEQSD 268 >gi|27467850|ref|NP_764487.1| 30S ribosomal protein S2 [Staphylococcus epidermidis ATCC 12228] gi|57866730|ref|YP_188405.1| 30S ribosomal protein S2 [Staphylococcus epidermidis RP62A] gi|242242539|ref|ZP_04796984.1| 30S ribosomal protein S2 [Staphylococcus epidermidis W23144] gi|251810687|ref|ZP_04825160.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BCM-HMP0060] gi|282876312|ref|ZP_06285179.1| ribosomal protein S2 [Staphylococcus epidermidis SK135] gi|293366780|ref|ZP_06613456.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W2(grey)] gi|38258362|sp|Q8CSU2|RS2_STAES RecName: Full=30S ribosomal protein S2 gi|61215356|sp|Q5HPT5|RS2_STAEQ RecName: Full=30S ribosomal protein S2 gi|27315395|gb|AAO04529.1|AE016747_26 30S ribosomal protein S2 [Staphylococcus epidermidis ATCC 12228] gi|57637388|gb|AAW54176.1| ribosomal protein S2 [Staphylococcus epidermidis RP62A] gi|242233966|gb|EES36278.1| 30S ribosomal protein S2 [Staphylococcus epidermidis W23144] gi|251805847|gb|EES58504.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BCM-HMP0060] gi|281295337|gb|EFA87864.1| ribosomal protein S2 [Staphylococcus epidermidis SK135] gi|291319081|gb|EFE59451.1| 30S ribosomal protein S2 [Staphylococcus epidermidis M23864:W2(grey)] gi|329724334|gb|EGG60846.1| ribosomal protein S2 [Staphylococcus epidermidis VCU144] gi|329736212|gb|EGG72484.1| ribosomal protein S2 [Staphylococcus epidermidis VCU028] gi|329736572|gb|EGG72838.1| ribosomal protein S2 [Staphylococcus epidermidis VCU045] Length = 262 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 103/267 (38%), Positives = 172/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEEGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ + + E+ + E++ ++ Sbjct: 236 EQNINLDDKEESEQAETTEENTSVESN 262 >gi|158336564|ref|YP_001517738.1| 30S ribosomal protein S2 [Acaryochloris marina MBIC11017] gi|189044924|sp|B0C075|RS2_ACAM1 RecName: Full=30S ribosomal protein S2 gi|158306805|gb|ABW28422.1| 30S ribosomal protein S2 [Acaryochloris marina MBIC11017] Length = 298 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 103/251 (41%), Positives = 148/251 (58%), Gaps = 4/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q+LESGV FGH+ WNPKM+ YIF ERN HIIDL QT ++ +A + Sbjct: 1 MPVISLAQMLESGVHFGHQARRWNPKMDPYIFTERNGVHIIDLVQTAQLMDEAYHYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ I++L+DLE Sbjct: 61 SESGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWTTIKTRIERLKDLERR 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+E + R+ DKL++ L G++ M +PD++ ++D RE A+QE ++L Sbjct: 121 YESGIFDLLPKQEASMLRRELDKLQKYLGGLKQMHKIPDVVVIIDIRREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY---MGADTK 238 +PIV+++DTN +PD VD IP NDD+ RSI L +A A +G Q S G D Sbjct: 181 LPIVSLLDTNCDPDWVDIPIPANDDAIRSIKLIIGKLADAIYEGRHGQVSAETFEGDDIP 240 Query: 239 SAGETVVHSKE 249 SA + + E Sbjct: 241 SAIDFEDETPE 251 >gi|221133314|ref|ZP_03559619.1| ribosomal protein S2 [Glaciecola sp. HTCC2999] Length = 242 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 157/225 (69%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL +S Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYVSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + V EAA + Q+ VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASKKGKVLFVGTKRAAGEAVKEAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L ++R+ KL+ +L GI+DMGGLPD++FV+D + E +A+ EAR L Sbjct: 121 SQDGTFDKLTKKEVLMLQREMTKLESSLGGIKDMGGLPDVIFVIDADHEHIAVTEARNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V VVDTNSNPD VDY+IPGNDD+ R+I L+ + A A I G Sbjct: 181 IPVVGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADAVISGR 225 >gi|291299704|ref|YP_003510982.1| 30S ribosomal protein S2 [Stackebrandtia nassauensis DSM 44728] gi|290568924|gb|ADD41889.1| ribosomal protein S2 [Stackebrandtia nassauensis DSM 44728] Length = 297 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 121/278 (43%), Positives = 178/278 (64%), Gaps = 9/278 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++RQLLESGV FGH+ WNPKM+R+I ERN ++IDL QT+ ++KA I +T Sbjct: 1 MPVVSMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYVIDLRQTLDYIEKAYGFIKNT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + E A+R VN +WLGGM+TN++T+ + +Q+L++LE L Sbjct: 61 VAEGGSIMFVGTKKQAQEAIAEQAQRVGMPYVNYRWLGGMLTNFQTMFKRLQRLKELEIL 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 N +G TKKE L + R++DKL R L G+RDM LP ++VVDT +E +A+ EAR+L Sbjct: 121 EQSGNAKEGRTKKELLQLMREKDKLARTLGGLRDMTKLPSAIWVVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM------- 233 IP+VA++DTN +PD V++ +PGNDD+ RS AL +VA A DG+ + S Sbjct: 181 GIPVVAILDTNCDPDEVNFPVPGNDDAIRSAALLTRVVADAVADGLIARSSKSDKEEDKP 240 Query: 234 GADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 GA A E + ++ + ++ +SE + + A Sbjct: 241 GAAGGDAAEPLAEWEQELLKPTETGASEGAHAESAAEA 278 >gi|311739714|ref|ZP_07713549.1| 30S ribosomal protein S2 [Corynebacterium pseudogenitalium ATCC 33035] gi|311305530|gb|EFQ81598.1| 30S ribosomal protein S2 [Corynebacterium pseudogenitalium ATCC 33035] Length = 277 Score = 324 bits (830), Expect = 9e-87, Method: Composition-based stats. Identities = 114/272 (41%), Positives = 171/272 (62%), Gaps = 2/272 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E+ G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA +L Sbjct: 121 DEREDGYKGRTKKEVLMLNRERAKLERVLGGISDMAKTPSALWIVDTNKEHIAVKEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G + A K A Sbjct: 181 NIPVVAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 ++ + S +S +E + Sbjct: 241 AGDSAEKEKRDAEAAAAASDPASAEKSEEASA 272 >gi|258406061|ref|YP_003198803.1| 30S ribosomal protein S2 [Desulfohalobium retbaense DSM 5692] gi|257798288|gb|ACV69225.1| ribosomal protein S2 [Desulfohalobium retbaense DSM 5692] Length = 262 Score = 324 bits (830), Expect = 9e-87, Method: Composition-based stats. Identities = 117/262 (44%), Positives = 167/262 (63%), Gaps = 1/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++Q+LE+GV FGH+ WNPKM +IF R HIIDL QTV + ++A VI D Sbjct: 1 MAYIKMKQMLETGVHFGHQTRRWNPKMRPFIFGARKGIHIIDLQQTVQLFRQAHDVIVDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG+I+FV TK QA + V E A+R + V ++WLGG +TN++T+ I++L+ LE + Sbjct: 61 VANGGKIIFVGTKRQAQEAVAEDAQRCGMFYVTNRWLGGTLTNFQTIKHRIERLKHLETM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F KKE ++R+ DKL+ AL GI+DM LP + FV+D RE+LAI+E R+L Sbjct: 121 FEDGSIHRFPKKEIAGMQRELDKLQAALGGIKDMEDLPQVAFVIDPKREELAIREFRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAV DTN +PD VDYVIPGNDD+ R+I LF VA A ++G+AR+ + + Sbjct: 181 IPIVAVTDTNCDPDQVDYVIPGNDDAIRAIKLFVSSVADACLEGLARRDEQPTEEQLTEA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 ++E + E +S E + Sbjct: 241 PQQTATEEQVAAESVEKSEEEA 262 >gi|281599523|gb|ADA72507.1| 30S ribosomal protein S2 [Shigella flexneri 2002017] Length = 307 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 113/243 (46%), Positives = 164/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V+R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIVSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFV 304 Query: 240 AGE 242 E Sbjct: 305 EAE 307 >gi|186685622|ref|YP_001868818.1| 30S ribosomal protein S2 [Nostoc punctiforme PCC 73102] gi|238689426|sp|B2J6U9|RS2_NOSP7 RecName: Full=30S ribosomal protein S2 gi|186468074|gb|ACC83875.1| ribosomal protein S2 [Nostoc punctiforme PCC 73102] Length = 264 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 97/261 (37%), Positives = 142/261 (54%), Gaps = 1/261 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAQLMDNAYNYMRSH 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ + +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEASRCGSHYINQRWLGGMLTNWATIKTRVDRLKDLERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD++ +VD RE A+QE ++L Sbjct: 121 EETGALDLLPKKEASMLRREMTKLQKYLGGIKTMRKVPDIVVIVDQRREYNAVQECQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Q G Sbjct: 181 IPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQLDAEDDYEDYDG 240 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 E + + E Sbjct: 241 SEYDDDYEETEYTDAVIPDEE 261 >gi|56964007|ref|YP_175738.1| 30S ribosomal protein S2 [Bacillus clausii KSM-K16] gi|61215395|sp|Q5WFS8|RS2_BACSK RecName: Full=30S ribosomal protein S2 gi|56910250|dbj|BAD64777.1| 30S ribosomal protein S2 [Bacillus clausii KSM-K16] Length = 242 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVETAYNFVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V + A R Y +N +WLGG +TN++T+ + I +L++LE++ Sbjct: 61 AADGGKILFVGTKKQAQDSVRDEAIRCGMYYINQRWLGGTLTNFETIQKRITRLKNLEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L++ L GI+DM G+PD +FV+D +E++AI EA +L Sbjct: 121 QEDGTFDVLPKKEVILLKKEMDRLEKFLGGIKDMNGVPDALFVIDPRKERIAIAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ A Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEATA 226 >gi|15924246|ref|NP_371780.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu50] gi|15926839|ref|NP_374372.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus N315] gi|21282868|ref|NP_645956.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MW2] gi|49483419|ref|YP_040643.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA252] gi|49486095|ref|YP_043316.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MSSA476] gi|82750857|ref|YP_416598.1| 30S ribosomal protein S2 [Staphylococcus aureus RF122] gi|87160672|ref|YP_493846.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|151221378|ref|YP_001332200.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. Newman] gi|156979577|ref|YP_001441836.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu3] gi|161509422|ref|YP_001575081.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315612|ref|ZP_04838825.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731875|ref|ZP_04866040.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733506|ref|ZP_04867671.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH130] gi|255006043|ref|ZP_05144644.2| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425310|ref|ZP_05601735.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257427971|ref|ZP_05604369.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257430604|ref|ZP_05606986.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 68-397] gi|257433364|ref|ZP_05609722.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus E1410] gi|257436206|ref|ZP_05612253.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus M876] gi|258415912|ref|ZP_05682182.1| 30S ribosomal protein S2 [Staphylococcus aureus A9763] gi|258423903|ref|ZP_05686788.1| SSU ribosomal protein S2 [Staphylococcus aureus A9635] gi|258434830|ref|ZP_05688904.1| 30S ribosomal protein S2 [Staphylococcus aureus A9299] gi|258444594|ref|ZP_05692923.1| 30S ribosomal protein S2 [Staphylococcus aureus A8115] gi|258447573|ref|ZP_05695717.1| 30S ribosomal protein S2 [Staphylococcus aureus A6300] gi|258449415|ref|ZP_05697518.1| 30S ribosomal protein S2 [Staphylococcus aureus A6224] gi|258452555|ref|ZP_05700561.1| 30S ribosomal protein S2 [Staphylococcus aureus A5948] gi|258454794|ref|ZP_05702758.1| 30S ribosomal protein S2 [Staphylococcus aureus A5937] gi|262051318|ref|ZP_06023541.1| 30S ribosomal protein S2 [Staphylococcus aureus 930918-3] gi|269202872|ref|YP_003282141.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ED98] gi|282892744|ref|ZP_06300979.1| 30S ribosomal protein S2 [Staphylococcus aureus A8117] gi|282903811|ref|ZP_06311699.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus C160] gi|282905574|ref|ZP_06313429.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282908549|ref|ZP_06316379.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910828|ref|ZP_06318631.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282914033|ref|ZP_06321820.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M899] gi|282916516|ref|ZP_06324274.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus D139] gi|282918955|ref|ZP_06326690.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C427] gi|282920500|ref|ZP_06328221.1| 30S ribosomal protein S2 [Staphylococcus aureus A9765] gi|282924078|ref|ZP_06331754.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C101] gi|282927598|ref|ZP_06335214.1| 30S ribosomal protein S2 [Staphylococcus aureus A10102] gi|283770320|ref|ZP_06343212.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus H19] gi|283957999|ref|ZP_06375450.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus A017934/97] gi|284024249|ref|ZP_06378647.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 132] gi|293501065|ref|ZP_06666916.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 58-424] gi|293510027|ref|ZP_06668735.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus M809] gi|293526613|ref|ZP_06671298.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M1015] gi|294848251|ref|ZP_06788998.1| 30S ribosomal protein S2 [Staphylococcus aureus A9754] gi|295427743|ref|ZP_06820375.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296274814|ref|ZP_06857321.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MR1] gi|297208098|ref|ZP_06924529.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297591299|ref|ZP_06949937.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MN8] gi|304381180|ref|ZP_07363833.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039455|sp|P66544|RS2_STAAN RecName: Full=30S ribosomal protein S2 gi|54039456|sp|P66545|RS2_STAAW RecName: Full=30S ribosomal protein S2 gi|54041956|sp|P66543|RS2_STAAM RecName: Full=30S ribosomal protein S2 gi|56749388|sp|Q6G9V7|RS2_STAAS RecName: Full=30S ribosomal protein S2 gi|56749417|sp|Q6GHH9|RS2_STAAR RecName: Full=30S ribosomal protein S2 gi|123486188|sp|Q2FHI2|RS2_STAA3 RecName: Full=30S ribosomal protein S2 gi|123768552|sp|Q2YXL2|RS2_STAAB RecName: Full=30S ribosomal protein S2 gi|166226759|sp|A7X1N3|RS2_STAA1 RecName: Full=30S ribosomal protein S2 gi|172048866|sp|A6QGF6|RS2_STAAE RecName: Full=30S ribosomal protein S2 gi|189044991|sp|A8Z3T6|RS2_STAAT RecName: Full=30S ribosomal protein S2 gi|209573687|sp|Q2FZ25|RS2_STAA8 RecName: Full=30S ribosomal protein S2 gi|13701056|dbj|BAB42351.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus N315] gi|14247026|dbj|BAB57418.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu50] gi|21204307|dbj|BAB95004.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MW2] gi|49241548|emb|CAG40234.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA252] gi|49244538|emb|CAG42967.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MSSA476] gi|82656388|emb|CAI80807.1| 30S ribosomal protein S2 [Staphylococcus aureus RF122] gi|87126646|gb|ABD21160.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|150374178|dbj|BAF67438.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. Newman] gi|156721712|dbj|BAF78129.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Mu3] gi|160368231|gb|ABX29202.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724285|gb|EES93014.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728560|gb|EES97289.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH130] gi|257271767|gb|EEV03905.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257274812|gb|EEV06299.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257278732|gb|EEV09351.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 68-397] gi|257281457|gb|EEV11594.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus E1410] gi|257284488|gb|EEV14608.1| SSU ribosomal protein S2 [Staphylococcus aureus subsp. aureus M876] gi|257839248|gb|EEV63722.1| 30S ribosomal protein S2 [Staphylococcus aureus A9763] gi|257845932|gb|EEV69961.1| SSU ribosomal protein S2 [Staphylococcus aureus A9635] gi|257849191|gb|EEV73173.1| 30S ribosomal protein S2 [Staphylococcus aureus A9299] gi|257850087|gb|EEV74040.1| 30S ribosomal protein S2 [Staphylococcus aureus A8115] gi|257853764|gb|EEV76723.1| 30S ribosomal protein S2 [Staphylococcus aureus A6300] gi|257857403|gb|EEV80301.1| 30S ribosomal protein S2 [Staphylococcus aureus A6224] gi|257859773|gb|EEV82615.1| 30S ribosomal protein S2 [Staphylococcus aureus A5948] gi|257863177|gb|EEV85941.1| 30S ribosomal protein S2 [Staphylococcus aureus A5937] gi|259160693|gb|EEW45714.1| 30S ribosomal protein S2 [Staphylococcus aureus 930918-3] gi|262075162|gb|ACY11135.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ED98] gi|269940747|emb|CBI49129.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TW20] gi|282314050|gb|EFB44442.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C101] gi|282316765|gb|EFB47139.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus C427] gi|282319003|gb|EFB49355.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus D139] gi|282322101|gb|EFB52425.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M899] gi|282325433|gb|EFB55742.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327611|gb|EFB57894.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330866|gb|EFB60380.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282590601|gb|EFB95678.1| 30S ribosomal protein S2 [Staphylococcus aureus A10102] gi|282594162|gb|EFB99149.1| 30S ribosomal protein S2 [Staphylococcus aureus A9765] gi|282595429|gb|EFC00393.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus C160] gi|282764741|gb|EFC04866.1| 30S ribosomal protein S2 [Staphylococcus aureus A8117] gi|283460467|gb|EFC07557.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus H19] gi|283470471|emb|CAQ49682.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus ST398] gi|283790148|gb|EFC28965.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus A017934/97] gi|285816938|gb|ADC37425.1| 30S ribosomal protein S2 [Staphylococcus aureus 04-02981] gi|290920685|gb|EFD97748.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus M1015] gi|291096070|gb|EFE26331.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus 58-424] gi|291466971|gb|EFF09489.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus M809] gi|294825051|gb|EFG41473.1| 30S ribosomal protein S2 [Staphylococcus aureus A9754] gi|295128101|gb|EFG57735.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887341|gb|EFH26243.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297576185|gb|EFH94901.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus MN8] gi|298694548|gb|ADI97770.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ED133] gi|302332862|gb|ADL23055.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus JKD6159] gi|302751079|gb|ADL65256.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340163|gb|EFM06104.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438365|gb|ADQ77436.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH60] gi|312829650|emb|CBX34492.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315194143|gb|EFU24536.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus CGS00] gi|315198497|gb|EFU28826.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus CGS01] gi|320140927|gb|EFW32774.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA131] gi|320144357|gb|EFW36123.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus MRSA177] gi|323441034|gb|EGA98741.1| 30S ribosomal protein S2 [Staphylococcus aureus O11] gi|323443903|gb|EGB01514.1| 30S ribosomal protein S2 [Staphylococcus aureus O46] gi|329313926|gb|AEB88339.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus T0131] gi|329727808|gb|EGG64259.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus 21189] Length = 255 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 104/260 (40%), Positives = 166/260 (63%), Gaps = 6/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 E + E + EE + E Sbjct: 236 EQNIDLDEKEKSEETEATEE 255 >gi|120403200|ref|YP_953029.1| 30S ribosomal protein S2 [Mycobacterium vanbaalenii PYR-1] gi|166225286|sp|A1T773|RS2_MYCVP RecName: Full=30S ribosomal protein S2 gi|119956018|gb|ABM13023.1| SSU ribosomal protein S2P [Mycobacterium vanbaalenii PYR-1] Length = 273 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 114/226 (50%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +T Sbjct: 1 MAVVTMKQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 VAHGGSIMFVGTKKQAQESIAEEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R+L GIRDM +P ++VVDTN+E LA+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERSLGGIRDMQKVPSAIWVVDTNKEHLAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+A++DTN +PDLVDY IPGNDD+ RS AL +VASA +G+ Sbjct: 181 IPIIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVVASAVAEGLQ 226 >gi|217077270|ref|YP_002334988.1| 30S ribosomal protein S2 [Thermosipho africanus TCF52B] gi|226697648|sp|B7IHT3|RS2_THEAB RecName: Full=30S ribosomal protein S2 gi|217037125|gb|ACJ75647.1| ribosomal protein S2 [Thermosipho africanus TCF52B] Length = 259 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 107/260 (41%), Positives = 164/260 (63%), Gaps = 3/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGHR WNPKM+ YIF R +IIDL +T +L +A + D Sbjct: 1 MAVLTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLDEAYNFVRDK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + A+R + VN +WLGG++TN++T+ + I KL +LEE+ Sbjct: 61 AAEGGTILFVGTKKQAQQVIKQEAERCGAFYVNHRWLGGLLTNFETIRKRIDKLIELEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E KKE+ + R +KL++ L G+++M LPD++++VD +E+ A+ EA L+ Sbjct: 121 EANGEFDHLPKKEQSRLRRILEKLRKNLGGLKNMTSLPDVIYIVDPRKERNAVYEANLLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP VA+VDTN +PD +DY+IPGNDD+ R+I L +A A ++G R+ G++ Sbjct: 181 IPTVAIVDTNCDPDEIDYIIPGNDDAIRAIQLITSKIADAYLEG--REGVSFGSEEAEEN 238 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 ++E ++E+ +S E Sbjct: 239 NQKEDNEEIFEIEDVDESEE 258 >gi|160939764|ref|ZP_02087111.1| hypothetical protein CLOBOL_04655 [Clostridium bolteae ATCC BAA-613] gi|158437198|gb|EDP14963.1| hypothetical protein CLOBOL_04655 [Clostridium bolteae ATCC BAA-613] Length = 287 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 99/243 (40%), Positives = 153/243 (62%), Gaps = 1/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD Sbjct: 38 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDI 97 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 98 AADGGTILFVGTKKQAQEAIKAEAERCGMYFVNERWLGGMLTNFKTIQSRIDRLKEIETM 157 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ DKL+R L GI+DM LPD +F+VD +E + +QEA L Sbjct: 158 SQDGTFDVLPKKEVIALKKEWDKLERNLGGIKDMKRLPDAIFIVDPKKEHICVQEAHTLG 217 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I+ + + + Sbjct: 218 IPLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQGEVLEGAMEIEIPA 277 Query: 242 ETV 244 + Sbjct: 278 QAF 280 >gi|117928749|ref|YP_873300.1| SSU ribosomal protein S2P [Acidothermus cellulolyticus 11B] gi|166225231|sp|A0LV54|RS2_ACIC1 RecName: Full=30S ribosomal protein S2 gi|117649212|gb|ABK53314.1| SSU ribosomal protein S2P [Acidothermus cellulolyticus 11B] Length = 275 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 112/244 (45%), Positives = 163/244 (66%), Gaps = 2/244 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LL GV FGH+ WNPKM+R+IF ERN +IIDL Q++ +++A + + DT Sbjct: 1 MAVVTMKELLAGGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIERAYEFVKDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VARGG +LFV TK QA + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 VARGGTVLFVGTKKQAQQAIAEQATRVGMPYVNQRWLGGMLTNFSTVYKRLQRLKELELL 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E TKKE L ++R+++KL+R L GIRDM LP +++VDT +E +A+ EAR+L Sbjct: 121 EQNGSLFGQATKKEALMLQREKEKLERTLGGIRDMTRLPAAVWIVDTKKEHIAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A A +G+ + + D K Sbjct: 181 GIPVVAILDTNCDPDEVDYPIPGNDDAIRSVSLLTRVIADAVAEGLMARAAARATDGKPE 240 Query: 241 GETV 244 E V Sbjct: 241 PEPV 244 >gi|110804221|ref|YP_687741.1| 30S ribosomal protein S2 [Shigella flexneri 5 str. 8401] gi|110613769|gb|ABF02436.1| 30S ribosomal subunit protein S2 [Shigella flexneri 5 str. 8401] Length = 307 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 113/243 (46%), Positives = 164/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V+R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIVSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFV 304 Query: 240 AGE 242 E Sbjct: 305 EAE 307 >gi|227544961|ref|ZP_03975010.1| ribosomal protein S2 [Lactobacillus reuteri CF48-3A] gi|300910008|ref|ZP_07127468.1| 30S ribosomal protein S2 [Lactobacillus reuteri SD2112] gi|227185072|gb|EEI65143.1| ribosomal protein S2 [Lactobacillus reuteri CF48-3A] gi|300892656|gb|EFK86016.1| 30S ribosomal protein S2 [Lactobacillus reuteri SD2112] Length = 262 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 113/268 (42%), Positives = 170/268 (63%), Gaps = 8/268 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AANDGVALFVGTKKQAQDAIEEEAIRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L Sbjct: 121 SEDGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVMFIVDPHKEQIAVKEAQKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Q + Sbjct: 181 IPIVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAFVEGKQGQDD-------AQQ 233 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 ET + + EDS + + ++G+E Sbjct: 234 ETADDNAANETVSEDSLKNLKNSVEGKE 261 >gi|332282843|ref|ZP_08395256.1| 30S ribosomal protein S2 [Shigella sp. D9] gi|332105195|gb|EGJ08541.1| 30S ribosomal protein S2 [Shigella sp. D9] Length = 307 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 164/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 65 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 124 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 125 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 184 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 185 TQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 244 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 245 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFV 304 Query: 240 AGE 242 E Sbjct: 305 EAE 307 >gi|268590532|ref|ZP_06124753.1| ribosomal protein S2 [Providencia rettgeri DSM 1131] gi|291314118|gb|EFE54571.1| ribosomal protein S2 [Providencia rettgeri DSM 1131] Length = 241 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD +D+VIPGNDD+ R+I L+ VAS +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVASTVREGRSQDLAVQAEESLVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|22299231|ref|NP_682478.1| 30S ribosomal protein S2 [Thermosynechococcus elongatus BP-1] gi|34222742|sp|Q8DIA2|RS2_THEEB RecName: Full=30S ribosomal protein S2 gi|22295413|dbj|BAC09240.1| 30S ribosomal protein S2 [Thermosynechococcus elongatus BP-1] Length = 263 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 97/254 (38%), Positives = 142/254 (55%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ Q+LE+GV FGH+ WNP+M YIF RN HIIDL QT ++++A I + Sbjct: 1 MAVLSLAQMLEAGVHFGHQARRWNPRMAPYIFTVRNGVHIIDLVQTAQLVEEAYNYIRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LF+ TK QA+ V + A R Y VN +WLGGM+TNW T+ + +L++LE + Sbjct: 61 AEKGKRFLFIGTKRQAAGIVEQEALRCGSYYVNQRWLGGMLTNWTTIKTRVDRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+E + R+ +L++ L GI+ M LPD+ +VD RE A+ E +L Sbjct: 121 EESGLIDLRPKQEASALRRELARLQKYLGGIKQMRRLPDIAIIVDVKREYNAVAECHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA++DTN +P VD IP NDD+ RSI L +A A +G Q AD Sbjct: 181 IPIVALLDTNCDPTQVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQLEEPEADLADED 240 Query: 242 ETVVHSKEGMQLEE 255 + + + + E Sbjct: 241 DNGMTTSDDGDAEA 254 >gi|241896315|ref|ZP_04783611.1| ribosomal protein S2 [Weissella paramesenteroides ATCC 33313] gi|241870295|gb|EER74046.1| ribosomal protein S2 [Weissella paramesenteroides ATCC 33313] Length = 281 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 109/258 (42%), Positives = 161/258 (62%), Gaps = 1/258 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++ +A + D Sbjct: 24 MAVISMKQLLEAGVHFGHQTRRWNPKMSDYIFTERNGIYIIDLQKTVKLVDQAYNYVRDA 83 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D + E A R+ + VN +WLGG +TNWKT+ I +L++L + Sbjct: 84 AADGATVLFVGTKKQAQDSIAEEATRANMFYVNHRWLGGTLTNWKTIQARIARLKELRAM 143 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL + L GI DM +PDLMF+VD ++E+LA+QEA +L Sbjct: 144 EEDGTFDRLPKKEVSLLIKQREKLDKFLGGIADMPKIPDLMFIVDPHKEQLAVQEAHKLN 203 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G + + AD + G Sbjct: 204 IPIVAMVDTNADPDQIDVKIPSNDDAIRAVRLITSKMADAIIEGNQGEDAVEEADFAAEG 263 Query: 242 ETVVHSKEGMQLEEDSQS 259 + +E L E ++ Sbjct: 264 DKPASIEELTDLVEGKKN 281 >gi|225867730|ref|YP_002743678.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus] gi|225869602|ref|YP_002745549.1| 30S ribosomal protein S2 [Streptococcus equi subsp. equi 4047] gi|254764491|sp|C0MAG7|RS2_STRE4 RecName: Full=30S ribosomal protein S2 gi|259495225|sp|C0MEG6|RS2_STRS7 RecName: Full=30S ribosomal protein S2 gi|225699006|emb|CAW92092.1| 30S ribosomal protein S2 [Streptococcus equi subsp. equi 4047] gi|225701006|emb|CAW97763.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus] Length = 256 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 99/256 (38%), Positives = 166/256 (64%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEGRQGEDAEVAFEADTQA 240 Query: 242 ETVVHSKEGMQLEEDS 257 E++ E ++ ++ Sbjct: 241 ESIEEIVEVVEGSNEA 256 >gi|325695372|gb|EGD37272.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK150] Length = 260 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 105/251 (41%), Positives = 164/251 (65%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDSVESVEVELAA 240 Query: 241 GETVVHSKEGM 251 ET S E + Sbjct: 241 TETQADSIEEI 251 >gi|149186821|ref|ZP_01865131.1| ribosomal protein S2 [Erythrobacter sp. SD-21] gi|148829488|gb|EDL47929.1| ribosomal protein S2 [Erythrobacter sp. SD-21] Length = 251 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 129/248 (52%), Positives = 174/248 (70%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQ+VP+ +AL IS Sbjct: 3 MAAPTVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHIIDLSQSVPLFARALDFIS 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T GG++LFV TK QA D + EAA + Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 63 QTARSGGKVLFVGTKRQAQDPIREAALAAGQHFVNHRWLGGMLTNWKTISGSIKELKTLE 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN+ RKRDKL+ +L GIR+MGG+PD+MFV+D N+E LAI+EA L Sbjct: 123 ETLSGDTSGLTKKEVLNLTRKRDKLELSLGGIRNMGGIPDVMFVIDANKEDLAIKEANVL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+DTN +P+ + + IPGNDD++R+I L+CD V AA G + GAD + Sbjct: 183 GIPVVAVLDTNVDPNGIAFPIPGNDDAARAIKLYCDAVGEAARSGKGEGVTDSGADVGAM 242 Query: 241 GETVVHSK 248 + Sbjct: 243 ANPPEEAA 250 >gi|197286131|ref|YP_002152003.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320] gi|227357250|ref|ZP_03841607.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906] gi|238690101|sp|B4F2D3|RS2_PROMH RecName: Full=30S ribosomal protein S2 gi|194683618|emb|CAR44518.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320] gi|227162513|gb|EEI47502.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906] Length = 241 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 159/241 (65%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALVELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK A + V EAA+ Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRSAVEAVKEAAESCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD +DY+IPGNDD+ R++ L+ A+A +G ++ + + Sbjct: 181 IPVFAIVDTNSDPDGIDYIIPGNDDAIRAVKLYLTAAATAVREGRSQDLAVQAEEGLVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|331680748|ref|ZP_08381407.1| ribosomal protein S2 [Escherichia coli H591] gi|331072211|gb|EGI43547.1| ribosomal protein S2 [Escherichia coli H591] Length = 306 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 164/243 (67%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 64 LIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 123 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 124 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 183 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 184 TQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 243 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 244 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFV 303 Query: 240 AGE 242 E Sbjct: 304 EAE 306 >gi|323487197|ref|ZP_08092500.1| hypothetical protein HMPREF9474_04251 [Clostridium symbiosum WAL-14163] gi|323695132|ref|ZP_08109272.1| ribosomal protein S2 [Clostridium symbiosum WAL-14673] gi|323399423|gb|EGA91818.1| hypothetical protein HMPREF9474_04251 [Clostridium symbiosum WAL-14163] gi|323500813|gb|EGB16735.1| ribosomal protein S2 [Clostridium symbiosum WAL-14673] Length = 251 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 96/246 (39%), Positives = 155/246 (63%), Gaps = 1/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V ++ +A + ++D Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGLVDEAYKAVADI 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 66 AADGGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIGRLKQIETM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ +QEA L Sbjct: 126 AEDGTFDVLPKKEVIALKKEWEKLEKNLGGIKEMKRVPDAIFVVDPKKERICVQEAHTLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ ++DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + + + Sbjct: 186 IPLIGIIDTNCDPEELDYVIPGNDDAIRAVKLIVSRMADAVIEARQGEAEAPVFEGEDVA 245 Query: 242 ETVVHS 247 E + Sbjct: 246 EEAAQA 251 >gi|253573553|ref|ZP_04850896.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str. D14] gi|251847081|gb|EES75086.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str. D14] Length = 232 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 153/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA D V E A+R+ Q+ +N +WLGG +TN++T+ + I++L+ LE Sbjct: 61 AEENGTILFVGTKKQAQDSVKEEAERAGQFYINQRWLGGTLTNFQTIQKRIERLKQLETW 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++++L++ L GI++M LP +FV+D +E++A+ EAR+L Sbjct: 121 EEDGTFSVLPKKEVIILRKEKERLEKFLGGIKNMKSLPSALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPIV +VDTN +PD +DYVIPGNDD+ R++ L +A A I+ + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEAHQGEQTTA 232 >gi|145300061|ref|YP_001142902.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida A449] gi|166225236|sp|A4SQI2|RS2_AERS4 RecName: Full=30S ribosomal protein S2 gi|142852833|gb|ABO91154.1| ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida A449] Length = 242 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 114/227 (50%), Positives = 162/227 (71%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNPKM+ YIF R+ HII+L +TVPM A+ IS Sbjct: 1 MAKVSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G++LFV TK AS+ V +AA R Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AAKKGKVLFVGTKRAASEAVKDAAGRCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ DKL+++L GI++MGGLPD++FVVD + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTREMDKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+V++VDTNSNPD VDYVIPGNDD+ R++ L+ + A ++ A+ Sbjct: 181 IPVVSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEARAQ 227 >gi|237785752|ref|YP_002906457.1| 30S ribosomal protein S2 [Corynebacterium kroppenstedtii DSM 44385] gi|259494992|sp|C4LJA9|RS2_CORK4 RecName: Full=30S ribosomal protein S2 gi|237758664|gb|ACR17914.1| 30S ribosomal protein S2 [Corynebacterium kroppenstedtii DSM 44385] Length = 286 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 118/269 (43%), Positives = 171/269 (63%), Gaps = 6/269 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL++GV FGH+ WNPKM+RYI ERN +IIDL QT+ + A + + +T Sbjct: 1 MAVVTMRQLLDAGVHFGHQTRRWNPKMKRYIITERNGIYIIDLQQTLTYIDSAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V A+R VN +WLGGM+TN++TV + + +L++L+ + Sbjct: 61 VAHGGNILFVGTKKQAQEAVATEAERVGMPYVNHRWLGGMLTNFQTVHKRLGRLKELQAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EN +G TKKE L + R+R KL+R L GI DM +P +++VDTN+E +A+ EA++L Sbjct: 121 DAAENGYEGRTKKEVLMLTRERQKLERVLGGISDMNKVPSAIWIVDTNKEHIAVSEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA---RQHSYMGADT 237 IP+VA++DTN +PD+VDY IPGNDD+ RS AL ++ASA DG + Sbjct: 181 NIPVVAILDTNCDPDVVDYPIPGNDDAIRSAALLTGVIASAVEDGKKARAERAQAEAKAA 240 Query: 238 KSAGETVVHSK-EGMQLEEDSQSSESSVL 265 + V S+ E ++ D+ S+ S Sbjct: 241 AGDNDAPVSSEGESTEVASDAASTASETT 269 >gi|227513170|ref|ZP_03943219.1| ribosomal protein S2 [Lactobacillus buchneri ATCC 11577] gi|227083551|gb|EEI18863.1| ribosomal protein S2 [Lactobacillus buchneri ATCC 11577] Length = 268 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 106/263 (40%), Positives = 169/263 (64%), Gaps = 1/263 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDVAYNFMKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G +LFV TK QA D + E A R+ QY VN++WLGG +TNW T+ +++L+DL+++ Sbjct: 61 ASKGAVVLFVGTKKQAQDSIAEEATRAGQYYVNNRWLGGTLTNWNTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++RDKL+R L GI DM LPD++F+VD +E++A+ EA++L Sbjct: 121 ATDGTFDVLPKKEVSLLMKQRDKLERFLGGIEDMPKLPDVLFIVDPRKEQIAVHEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D VIP NDD+ R++ L +A+A I+G + ++ Sbjct: 181 IPIVAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSTMANAIIEGRQGEDEVNEDTFENGS 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 +T + +E+ + + ES Sbjct: 241 KTDKKDSKEDSIEDIANAVESKS 263 >gi|227503379|ref|ZP_03933428.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49725] gi|227075882|gb|EEI13845.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49725] Length = 277 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 113/270 (41%), Positives = 170/270 (62%), Gaps = 2/270 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E+ G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A++EA +L Sbjct: 121 DEREDGYKGRTKKEVLMLNRERAKLERVLGGISEMAKTPSALWIVDTNKEHIAVKEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G + A K A Sbjct: 181 NIPVVAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 ++ + S +S +E Sbjct: 241 AGDSAEKEQRDAEAAAAASDPASAEKAEEA 270 >gi|330718873|ref|ZP_08313473.1| 30S ribosomal protein S2 [Leuconostoc fallax KCTC 3537] Length = 258 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 112/255 (43%), Positives = 162/255 (63%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM+ +IF ERN HIIDL +TV + +A + + Sbjct: 1 MAVISMKELLEAGVHFGHQTRRWNPKMDEFIFTERNGIHIIDLQKTVKLADEAYNFVRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA+D + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 61 STDGANILFVGTKKQAADAIAEEATRAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEVM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ KL++ L GI+DM GLPD++FVVD N+E++AI+EAR L Sbjct: 121 AEDGTFDALPKKEVVLLNKQHAKLEKFLGGIKDMPGLPDVLFVVDPNKEEIAIKEARSLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTNSNPDLVD IP NDD+ R++ L +A A I+G Q S Sbjct: 181 IPVVAMIDTNSNPDLVDVKIPANDDAIRAVRLITSKMADAVIEGRQGQDSAPEDAFVEGD 240 Query: 242 ETVVHSKEGMQLEED 256 + V +E + E+ Sbjct: 241 DNVESIEEITNIVEE 255 >gi|238763979|ref|ZP_04624935.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638] gi|238697796|gb|EEP90557.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638] Length = 241 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVTEGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|148553384|ref|YP_001260966.1| 30S ribosomal protein S2 [Sphingomonas wittichii RW1] gi|166226758|sp|A5V3G2|RS2_SPHWW RecName: Full=30S ribosomal protein S2 gi|148498574|gb|ABQ66828.1| SSU ribosomal protein S2P [Sphingomonas wittichii RW1] Length = 250 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 125/248 (50%), Positives = 176/248 (70%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P +++ LL++G FGH+ WNPKM+ Y+F +RN HIIDLSQTVP++ +AL +IS Sbjct: 1 MAAPTVSMQALLDAGAHFGHQTHRWNPKMKPYLFGDRNGIHIIDLSQTVPLMARALDLIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + EAA+RS Q+ VN +WLGGM+TNWKT+S SI++ + LE Sbjct: 61 QTVQHGGKVLFVGTKRQAQEPIAEAARRSGQHYVNHRWLGGMLTNWKTISNSIKRFKALE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE L + R+RDK + +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTHGLTKKEVLQLTRERDKFELSLGGIRDMGGIPDVMFVIDANKEELAIKEANTL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD + + +P NDD++R+I L+C+ VA AA G G D +A Sbjct: 181 GIPVVAILDSNVSPDGIAFPVPANDDAARAIRLYCEAVAEAATRGAQGGRQARGEDLGAA 240 Query: 241 GETVVHSK 248 E Sbjct: 241 VEAPSEDA 248 >gi|227510241|ref|ZP_03940290.1| ribosomal protein S2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189893|gb|EEI69960.1| ribosomal protein S2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 268 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 105/268 (39%), Positives = 169/268 (63%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDVAYNFMKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G +LFV TK QA D + E A R+ QY VN++WLGG +TNW T+ +++L+DL+++ Sbjct: 61 ASKGAVVLFVGTKKQAQDSIAEEATRAGQYYVNNRWLGGTLTNWNTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++RDKL+R L GI DM LPD++F+VD +E++A+ EA++L Sbjct: 121 ATDGTFDVLPKKEVSLLMKQRDKLERFLGGIEDMPKLPDVLFIVDPRKEQIAVHEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D VIP NDD+ R++ L +A+A I+G + ++ Sbjct: 181 IPIVAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSTMANAIIEGRQGEDEVNEDTFENGS 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +T + +E+ + + E + Sbjct: 241 KTDKKDSKEDSIEDIANAVEGKSDTDNK 268 >gi|154686066|ref|YP_001421227.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens FZB42] gi|308173612|ref|YP_003920317.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens DSM 7] gi|166225239|sp|A7Z4S0|RS2_BACA2 RecName: Full=30S ribosomal protein S2 gi|154351917|gb|ABS73996.1| RpsB [Bacillus amyloliquefaciens FZB42] gi|307606476|emb|CBI42847.1| ribosomal protein S2 [Bacillus amyloliquefaciens DSM 7] gi|328553456|gb|AEB23948.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens TA208] gi|328911753|gb|AEB63349.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens LL3] Length = 246 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 100/226 (44%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V E A RS Y VN +WLGG +TN++T+ + I++L+D+E++ Sbjct: 61 AAEGGKILFVGTKKQAQDSVKEEAVRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE + ++++ ++L++ L GI+DM LPD +F++D +E++A+ EAR+L Sbjct: 121 QENGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKDLPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 181 IPIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAKQ 226 >gi|51892629|ref|YP_075320.1| 30S ribosomal protein S2 [Symbiobacterium thermophilum IAM 14863] gi|61215498|sp|Q67PB7|RS2_SYMTH RecName: Full=30S ribosomal protein S2 gi|51856318|dbj|BAD40476.1| 30S ribosomal protein S2 [Symbiobacterium thermophilum IAM 14863] Length = 264 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 111/263 (42%), Positives = 162/263 (61%), Gaps = 1/263 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M++ A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTVRMVEIAYNAVRQM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILF+ TK QA D V E A+R + VN +WLGGM+TN++T+ + I +L +LEE+ Sbjct: 61 AADGGKILFIGTKKQAQDAVREEAERCGMFYVNQRWLGGMLTNFETIKKRIARLNELEEI 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E TKKE+ + +++KL++ L GI+ M LPD+ FV+D RE++A+ E R+L Sbjct: 121 EGTEYWSKLTKKEQAQLLHEKEKLEKNLGGIKGMKSLPDMAFVIDPRRERIAVSELRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + D + A Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKIADAVIEGRQGVDTSATVDEEEAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 + D+ E Sbjct: 241 VAEETESMESAEDLDADLIEEEA 263 >gi|238784880|ref|ZP_04628880.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970] gi|238787235|ref|ZP_04631034.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641] gi|238714197|gb|EEQ06209.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970] gi|238724497|gb|EEQ16138.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641] Length = 241 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVNEGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|125718985|ref|YP_001036118.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK36] gi|323350653|ref|ZP_08086314.1| 30S ribosomal protein S2 [Streptococcus sanguinis VMC66] gi|166226761|sp|A3CQW3|RS2_STRSV RecName: Full=30S ribosomal protein S2 gi|125498902|gb|ABN45568.1| 30S ribosomal protein S2, putative [Streptococcus sanguinis SK36] gi|322123073|gb|EFX94764.1| 30S ribosomal protein S2 [Streptococcus sanguinis VMC66] gi|325686702|gb|EGD28728.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK72] gi|325688848|gb|EGD30856.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK115] gi|325697313|gb|EGD39199.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK160] gi|327463502|gb|EGF09821.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1057] gi|327467891|gb|EGF13381.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK330] gi|327472152|gb|EGF17589.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK408] gi|328944698|gb|EGG38859.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1087] gi|332358143|gb|EGJ35975.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK49] gi|332360109|gb|EGJ37923.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1056] gi|332365234|gb|EGJ42997.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1059] gi|332365398|gb|EGJ43159.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK355] Length = 260 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 105/251 (41%), Positives = 164/251 (65%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDSVESVEAELAA 240 Query: 241 GETVVHSKEGM 251 ET S E + Sbjct: 241 TETQADSIEEI 251 >gi|330685652|gb|EGG97293.1| ribosomal protein S2 [Staphylococcus epidermidis VCU121] Length = 262 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 105/267 (39%), Positives = 172/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA D V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQDSVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKTMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ E + ++ + E++ ++ Sbjct: 236 EQNINLDEKEESDKAETTEENTSVESN 262 >gi|238792755|ref|ZP_04636386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909] gi|238727863|gb|EEQ19386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909] Length = 241 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ + VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVATAVTEGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|126657336|ref|ZP_01728495.1| 30S ribosomal protein S2 [Cyanothece sp. CCY0110] gi|126621323|gb|EAZ92035.1| 30S ribosomal protein S2 [Cyanothece sp. CCY0110] Length = 271 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 95/245 (38%), Positives = 144/245 (58%), Gaps = 2/245 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LL +GV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + Sbjct: 1 MPVVSLEDLLNAGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNG 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 ADKGRRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE ++L Sbjct: 121 EESGQIARRPKKEASVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+++++DTN +PD D IP NDD+ RSI L +A A +G Q D + Sbjct: 181 IPMISLLDTNCDPDYADIPIPANDDAIRSIKLILGKLADAIYEGRHGQLD-SDDDYEEFD 239 Query: 242 ETVVH 246 E++ Sbjct: 240 ESLAE 244 >gi|51597318|ref|YP_071509.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953] gi|108806515|ref|YP_650431.1| 30S ribosomal protein S2 [Yersinia pestis Antiqua] gi|108813117|ref|YP_648884.1| 30S ribosomal protein S2 [Yersinia pestis Nepal516] gi|145598951|ref|YP_001163027.1| 30S ribosomal protein S2 [Yersinia pestis Pestoides F] gi|149366955|ref|ZP_01888988.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125] gi|153947133|ref|YP_001399997.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758] gi|161484768|ref|NP_670436.2| 30S ribosomal protein S2 [Yersinia pestis KIM 10] gi|161511344|ref|NP_994114.2| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str. 91001] gi|162420294|ref|YP_001607772.1| 30S ribosomal protein S2 [Yersinia pestis Angola] gi|165927142|ref|ZP_02222974.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. F1991016] gi|166011898|ref|ZP_02232796.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001] gi|166211704|ref|ZP_02237739.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. B42003004] gi|167419541|ref|ZP_02311294.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425321|ref|ZP_02317074.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170023315|ref|YP_001719820.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis YPIII] gi|186896423|ref|YP_001873535.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+] gi|218928212|ref|YP_002346087.1| 30S ribosomal protein S2 [Yersinia pestis CO92] gi|229837751|ref|ZP_04457911.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A] gi|229840973|ref|ZP_04461132.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843074|ref|ZP_04463224.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. India 195] gi|229903559|ref|ZP_04518672.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516] gi|25009213|sp|Q8ZH66|RS2_YERPE RecName: Full=30S ribosomal protein S2 gi|61215491|sp|Q667I9|RS2_YERPS RecName: Full=30S ribosomal protein S2 gi|122979779|sp|Q1CAN6|RS2_YERPA RecName: Full=30S ribosomal protein S2 gi|122980004|sp|Q1CFE6|RS2_YERPN RecName: Full=30S ribosomal protein S2 gi|166226769|sp|A4TL92|RS2_YERPP RecName: Full=30S ribosomal protein S2 gi|167011240|sp|A7FFG9|RS2_YERP3 RecName: Full=30S ribosomal protein S2 gi|238687288|sp|A9R396|RS2_YERPG RecName: Full=30S ribosomal protein S2 gi|238688486|sp|B1JQG0|RS2_YERPY RecName: Full=30S ribosomal protein S2 gi|238691339|sp|B2JZ34|RS2_YERPB RecName: Full=30S ribosomal protein S2 gi|51590600|emb|CAH22241.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953] gi|108776765|gb|ABG19284.1| SSU ribosomal protein S2P [Yersinia pestis Nepal516] gi|108778428|gb|ABG12486.1| SSU ribosomal protein S2P [Yersinia pestis Antiqua] gi|115346823|emb|CAL19709.1| 30S ribosomal protein S2 [Yersinia pestis CO92] gi|145210647|gb|ABP40054.1| SSU ribosomal protein S2P [Yersinia pestis Pestoides F] gi|149290569|gb|EDM40645.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125] gi|152958628|gb|ABS46089.1| ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758] gi|162353109|gb|ABX87057.1| ribosomal protein S2 [Yersinia pestis Angola] gi|165921038|gb|EDR38262.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. F1991016] gi|165989164|gb|EDR41465.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001] gi|166207475|gb|EDR51955.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962282|gb|EDR58303.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055721|gb|EDR65505.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749849|gb|ACA67367.1| ribosomal protein S2 [Yersinia pseudotuberculosis YPIII] gi|186699449|gb|ACC90078.1| ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+] gi|229679329|gb|EEO75432.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516] gi|229689950|gb|EEO82009.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. India 195] gi|229697339|gb|EEO87386.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704128|gb|EEO91140.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A] gi|262361097|gb|ACY57818.1| 30S ribosomal protein S2 [Yersinia pestis D106004] gi|262365339|gb|ACY61896.1| 30S ribosomal protein S2 [Yersinia pestis D182038] gi|320014178|gb|ADV97749.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 241 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|251790745|ref|YP_003005466.1| 30S ribosomal protein S2 [Dickeya zeae Ech1591] gi|247539366|gb|ACT07987.1| ribosomal protein S2 [Dickeya zeae Ech1591] Length = 241 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 116/241 (48%), Positives = 165/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VDY+IPGNDD+ R+++L+ VA+A +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDYIIPGNDDAIRAVSLYLSAVAAAVREGRSQDLAEQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|313890410|ref|ZP_07824041.1| ribosomal protein S2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121253|gb|EFR44361.1| ribosomal protein S2 [Streptococcus pseudoporcinus SPIN 20026] Length = 255 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 165/253 (65%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDAEVDFEADAKA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|289550953|ref|YP_003471857.1| SSU ribosomal protein S2p (SAe) [Staphylococcus lugdunensis HKU09-01] gi|315658455|ref|ZP_07911327.1| 30S ribosomal protein S2 [Staphylococcus lugdunensis M23590] gi|289180485|gb|ADC87730.1| SSU ribosomal protein S2p (SAe) [Staphylococcus lugdunensis HKU09-01] gi|315496784|gb|EFU85107.1| 30S ribosomal protein S2 [Staphylococcus lugdunensis M23590] Length = 262 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 104/267 (38%), Positives = 170/267 (63%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + E + ++ + E++ ++ Sbjct: 236 EQNIDLDEKEEAKDAETTEENTSVESN 262 >gi|220927895|ref|YP_002504804.1| 30S ribosomal protein S2 [Clostridium cellulolyticum H10] gi|254764469|sp|B8I6D2|RS2_CLOCE RecName: Full=30S ribosomal protein S2 gi|219998223|gb|ACL74824.1| ribosomal protein S2 [Clostridium cellulolyticum H10] Length = 252 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 156/252 (61%), Gaps = 2/252 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + A I + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVDDAYFFIREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A+RS Q+ VN++WLGGM+TN+KT+++ I +L L + Sbjct: 61 AMNGQDVLFVGTKKQAQDSIREEAERSGQFFVNNRWLGGMLTNFKTITKRINRLHQLNAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE ++++ L++ L GI++M LP MFVVD +E+ AI EA+RL Sbjct: 121 ETDGTFEVLPKKEVSKLKKEMADLEKNLGGIKNMKKLPGAMFVVDPRKERNAILEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA-RQHSYMGADTKSA 240 IP+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A I+G Q + +T Sbjct: 181 IPVVAIVDTNCDPDEVDFVIPGNDDAIRAVKLIAAKMADAVIEGRQGEQLAETPVETAEV 240 Query: 241 GETVVHSKEGMQ 252 E + E + Sbjct: 241 AEEAQVAVEAAE 252 >gi|309811477|ref|ZP_07705259.1| ribosomal protein S2 [Dermacoccus sp. Ellin185] gi|308434528|gb|EFP58378.1| ribosomal protein S2 [Dermacoccus sp. Ellin185] Length = 308 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 175/273 (64%), Gaps = 5/273 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLTYINDAYEFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG ILFV TK QA + + E A R +N +WLGGM+TN++T+S+ + +L++LE Sbjct: 61 VAHGGTILFVGTKKQAQESIAEQATRVGMPYINHRWLGGMLTNFQTISKRLARLKELEAL 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G+TKKE L + R++ KL+ L GIR+M +P +++VDT +E LA+ EAR+L Sbjct: 121 DFDDVAGSGYTKKELLLLSREKAKLELVLGGIREMSKIPSAVWIVDTKKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +P++A++DTN +PD VDY IPGNDD+ RS+ + ++A A +G+ + S G +SA Sbjct: 181 GLPVIAILDTNCDPDEVDYKIPGNDDAIRSVGILTRVIADAVAEGLVARSS--GKSGESA 238 Query: 241 GETVVH-SKEGMQLEEDSQSSESSVLDGQEVAV 272 E + +E + + ++++ + + ++ Sbjct: 239 AEPMAEWERELLASDTGAKAAADTDTETGPSSI 271 >gi|17232284|ref|NP_488832.1| 30S ribosomal protein S2 [Nostoc sp. PCC 7120] gi|25009211|sp|Q8YMY2|RS2_ANASP RecName: Full=30S ribosomal protein S2 gi|17133929|dbj|BAB76491.1| 30S ribosomal protein S2 [Nostoc sp. PCC 7120] Length = 265 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 102/269 (37%), Positives = 151/269 (56%), Gaps = 6/269 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ +A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAHLMDEAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ + +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRVDRLKDLERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD++ +VD RE A+QE ++L Sbjct: 121 EESGALDLLPKKEASMLRRELAKLQKYLGGIKTMRKVPDVVVIVDQRREYNAVQECQKLS 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Q D + Sbjct: 181 IPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQL-----DVEEEY 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E S+E +E + DG+E Sbjct: 236 EDYEGSEEDYDYDETEYADSVIPEDGEEA 264 >gi|251783454|ref|YP_002997759.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392086|dbj|BAH82545.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322412830|gb|EFY03738.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] gi|323128199|gb|ADX25496.1| 30S ribosomal protein S2 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 255 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 99/253 (39%), Positives = 164/253 (64%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEGRQGEDADVAFEADTQA 240 Query: 242 ETVVHSKEGMQLE 254 E++ E ++ + Sbjct: 241 ESIEEIVEVVEGD 253 >gi|194014878|ref|ZP_03053495.1| ribosomal protein S2 [Bacillus pumilus ATCC 7061] gi|194013904|gb|EDW23469.1| ribosomal protein S2 [Bacillus pumilus ATCC 7061] Length = 244 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 100/226 (44%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V E A RS + VN +WLGG +TN++T+ + I++L+D+E++ Sbjct: 61 AADGGKILFVGTKKQAQDSVKEEAIRSGMFYVNQRWLGGTLTNFETIQKRIKRLKDIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + ++++ ++L++ L GI+DM GLPD +F++D +E++A+ EAR+L Sbjct: 121 QENGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 181 IPIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTAKMADAILESKQ 226 >gi|238754807|ref|ZP_04616158.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473] gi|238706967|gb|EEP99333.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473] Length = 241 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNQALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKESANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLGAVATAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|261344736|ref|ZP_05972380.1| ribosomal protein S2 [Providencia rustigianii DSM 4541] gi|282567178|gb|EFB72713.1| ribosomal protein S2 [Providencia rustigianii DSM 4541] Length = 241 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELVKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD +D+VIPGNDD+ R+I L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVANTVREGRSQDLAVQAEESLVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|183597597|ref|ZP_02959090.1| hypothetical protein PROSTU_00879 [Providencia stuartii ATCC 25827] gi|188023093|gb|EDU61133.1| hypothetical protein PROSTU_00879 [Providencia stuartii ATCC 25827] Length = 241 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD +D+VIPGNDD+ R+I L+ VA++ +G ++ + + Sbjct: 181 IPVFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLSAVATSVREGRSQDLAVQAEEGLVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|259503112|ref|ZP_05746014.1| 30S ribosomal protein S2 [Lactobacillus antri DSM 16041] gi|259168978|gb|EEW53473.1| 30S ribosomal protein S2 [Lactobacillus antri DSM 16041] Length = 262 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 113/267 (42%), Positives = 170/267 (63%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYDYMKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD++F+VD ++E++A++EA++L Sbjct: 121 AEDGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLFIVDPHKEQIAVKEAQKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Q AD Sbjct: 181 IPIVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAIVEGKQGQDDAQQADA---- 236 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 + E + EDS + + ++G+ Sbjct: 237 -AADDNAEEETVSEDSLKNLKNSVEGK 262 >gi|238751451|ref|ZP_04612943.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380] gi|238796608|ref|ZP_04640115.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969] gi|238710318|gb|EEQ02544.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380] gi|238719586|gb|EEQ11395.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969] Length = 241 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ +AL + Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVNEGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|329117523|ref|ZP_08246240.1| ribosomal protein S2 [Streptococcus parauberis NCFD 2020] gi|326907928|gb|EGE54842.1| ribosomal protein S2 [Streptococcus parauberis NCFD 2020] Length = 255 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 99/253 (39%), Positives = 167/253 (66%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVSLLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + +T++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEGRQGEDADVNFETEAKA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|238854752|ref|ZP_04645082.1| ribosomal protein S2 [Lactobacillus jensenii 269-3] gi|260663984|ref|ZP_05864837.1| ribosomal protein S2 [Lactobacillus jensenii SJ-7A-US] gi|282932857|ref|ZP_06338254.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] gi|313472272|ref|ZP_07812764.1| ribosomal protein S2 [Lactobacillus jensenii 1153] gi|238832542|gb|EEQ24849.1| ribosomal protein S2 [Lactobacillus jensenii 269-3] gi|239529671|gb|EEQ68672.1| ribosomal protein S2 [Lactobacillus jensenii 1153] gi|260561870|gb|EEX27839.1| ribosomal protein S2 [Lactobacillus jensenii SJ-7A-US] gi|281302892|gb|EFA95097.1| ribosomal protein S2 [Lactobacillus jensenii 208-1] Length = 257 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 103/259 (39%), Positives = 154/259 (59%), Gaps = 3/259 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+ L+ + Sbjct: 61 AQNDGVFLFVGTKKQAQEAIKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL+R L GI DM +PD+MFVVD +EK+A+ EA +L Sbjct: 121 SEDGTFDLLPKKEVALLTKEMDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A I+G +Q + Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPANDDAIRAIRLIAGAMADAVIEG--KQGEDDENVEQEMA 238 Query: 242 ETVVHSKEGMQLEEDSQSS 260 + S + +EE + Sbjct: 239 DKAAESNDEKSMEEVANED 257 >gi|311744116|ref|ZP_07717922.1| 30S ribosomal protein S2 [Aeromicrobium marinum DSM 15272] gi|311313246|gb|EFQ83157.1| 30S ribosomal protein S2 [Aeromicrobium marinum DSM 15272] Length = 323 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 114/261 (43%), Positives = 169/261 (64%), Gaps = 3/261 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + + + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLAYIDAGYEFVKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VARGG ILFV TK QA + + E AKR VN +WLGGM+TN++T+ Q +Q++++LE Sbjct: 61 VARGGTILFVGTKRQAQEPIEEQAKRVGMPYVNQRWLGGMLTNFQTMHQRLQRMKELETV 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + TKKE L + R+ KL R L GIR+MG P +++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSNRTKKELLQMRREYAKLSRTLGGIREMGRTPSAVWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A++DTN +PD VD+ IPGNDD+ RS++L ++A A +G+ + D + A Sbjct: 181 GIPIIAILDTNCDPDDVDFPIPGNDDAIRSVSLLTRVIADAVAEGLIARGGAKTGD-EVA 239 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 GE + + + E + +S+ Sbjct: 240 GEELGGGEPLAEWEAELLASK 260 >gi|75908282|ref|YP_322578.1| 30S ribosomal protein S2 [Anabaena variabilis ATCC 29413] gi|123731512|sp|Q3MBF3|RS2_ANAVT RecName: Full=30S ribosomal protein S2 gi|75702007|gb|ABA21683.1| SSU ribosomal protein S2P [Anabaena variabilis ATCC 29413] Length = 265 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 99/269 (36%), Positives = 151/269 (56%), Gaps = 6/269 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ +A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAHLMDEAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ + +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRVDRLKDLERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD++ +VD RE A+QE ++L Sbjct: 121 EESGALDLLPKKEASMLRRELAKLQKYLGGIKTMRKVPDVVVIVDQRREYNAVQECQKLS 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Q D + Sbjct: 181 IPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQL-----DVEEEY 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E +++ + +E + D +E Sbjct: 236 EDYEGAEDDYEYDETEYTDSVIPDDEEEA 264 >gi|324989880|gb|EGC21823.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK353] Length = 260 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 105/251 (41%), Positives = 165/251 (65%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDRTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDSVESVEAELAA 240 Query: 241 GETVVHSKEGM 251 ET S E + Sbjct: 241 TETQADSIEEI 251 >gi|228475062|ref|ZP_04059790.1| ribosomal protein S2 [Staphylococcus hominis SK119] gi|228271047|gb|EEK12435.1| ribosomal protein S2 [Staphylococcus hominis SK119] Length = 262 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 103/267 (38%), Positives = 170/267 (63%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQ-----GISNDEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + E + ++ + E++ ++ Sbjct: 236 EQNIDLDESEETQKAESTEENTTVESN 262 >gi|222153849|ref|YP_002563026.1| 30S ribosomal protein S2 [Streptococcus uberis 0140J] gi|254764494|sp|B9DW41|RS2_STRU0 RecName: Full=30S ribosomal protein S2 gi|222114662|emb|CAR43722.1| 30S ribosomal protein S2 [Streptococcus uberis 0140J] Length = 255 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 165/253 (65%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRITRLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAIIEGRQGEDASVEFEADTKA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|332976814|gb|EGK13642.1| 30S ribosomal protein S2 [Desmospora sp. 8437] Length = 234 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 100/234 (42%), Positives = 162/234 (69%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKME+YIF ERN +IIDL +TV M+++ + D Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMEKYIFTERNGIYIIDLQKTVKMMEETYNYVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++GG+ILFV TK QA D V E A+RS + VN +WLGG +TN++T+ + I +L LE + Sbjct: 61 ASKGGKILFVGTKKQAQDAVREEAERSGMFYVNHRWLGGTLTNFQTIRKRIDRLHKLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +++++ +L++ L GI+ M LPD +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVVMLKKEQARLEKFLGGIKHMKELPDAVFIIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 IPI+A+VDTN +PD +D++IPGNDD+ R++ LF +A A+++G + + + Sbjct: 181 IPIIAIVDTNCDPDEIDHIIPGNDDAIRAVRLFTSKMADASLEGKQGEETTTAS 234 >gi|227524385|ref|ZP_03954434.1| ribosomal protein S2 [Lactobacillus hilgardii ATCC 8290] gi|227088616|gb|EEI23928.1| ribosomal protein S2 [Lactobacillus hilgardii ATCC 8290] Length = 268 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 105/263 (39%), Positives = 169/263 (64%), Gaps = 1/263 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDVAYNFMKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G +LFV TK QA + + E A R+ QY VN++WLGG +TNW T+ +++L+DL+++ Sbjct: 61 ASKGAVVLFVGTKKQAQNSIAEEATRAGQYYVNNRWLGGTLTNWNTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++RDKL+R L GI DM LPD++F+VD +E++A+ EA++L Sbjct: 121 ATDGTFDVLPKKEVSLLMKQRDKLERFLGGIEDMPKLPDVLFIVDPRKEQIAVHEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D VIP NDD+ R++ L +A+A I+G + ++ Sbjct: 181 IPIVAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSTMANAIIEGRQGEDEVNEDTFENGS 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 +T + +E+ + + ES Sbjct: 241 KTDKKDSKEDSIEDIANAVESKS 263 >gi|262184373|ref|ZP_06043794.1| 30S ribosomal protein S2 [Corynebacterium aurimucosum ATCC 700975] Length = 275 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 112/275 (40%), Positives = 171/275 (62%), Gaps = 2/275 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQEAVAEEASRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA++L Sbjct: 121 DAAEDGYKGRTKKEVLMLTRERTKLERVLGGISDMTKAPSALWIVDTNKEHIAVKEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ R+ L ++A+A +G + A K A Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRATKLLSGIIATAVDEGKKAREERQLAQAKEA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E + S +S ++ E Sbjct: 241 AGDTAEKDARDAAEAAAASDPASAEKSEDAEKSAE 275 >gi|303240829|ref|ZP_07327342.1| ribosomal protein S2 [Acetivibrio cellulolyticus CD2] gi|302591717|gb|EFL61452.1| ribosomal protein S2 [Acetivibrio cellulolyticus CD2] Length = 251 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 106/238 (44%), Positives = 157/238 (65%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVEEAYYFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A+RS QY VN++WLGGM+TN+KT+ I +L++LE + Sbjct: 61 AMNGQGVLFVGTKKQAQDSIKEEAERSDQYFVNARWLGGMLTNFKTIKTRINRLKELERM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ + +KL++ L GI++M GLP +F+VD +E+ AI EAR L Sbjct: 121 ETEGIFDVLPKKEVIKLKGEMEKLEKYLGGIKNMKGLPGALFIVDPRKERNAILEARNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G + + ++ + Sbjct: 181 IPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLIAAKMADAIIEGRQGEQLSVAQESSN 238 >gi|324992603|gb|EGC24524.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK405] gi|324995867|gb|EGC27778.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK678] gi|327460006|gb|EGF06345.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1] gi|327488596|gb|EGF20396.1| 30S ribosomal protein S2 [Streptococcus sanguinis SK1058] Length = 260 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 105/258 (40%), Positives = 163/258 (63%), Gaps = 9/258 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + + +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVKEEAERSGQYFINHRWLGGTLTNWSTIQKRVARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDSVESVEAELAE 240 Query: 242 --------ETVVHSKEGM 251 E +V EG Sbjct: 241 TETQADSIEEIVEVVEGS 258 >gi|326333660|ref|ZP_08199897.1| ribosomal protein S2 [Nocardioidaceae bacterium Broad-1] gi|325948566|gb|EGD40669.1| ribosomal protein S2 [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 113/263 (42%), Positives = 172/263 (65%), Gaps = 4/263 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I +RN +IIDL Q++ + ++ I +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTDRNGIYIIDLQQSLAYIDRSYAFIKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA+GG I+FV TK QA + + E A R VN +WLGGM+TN++TV Q I +L++L+E Sbjct: 61 VAKGGTIMFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFQTVHQRINRLKELDEV 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L ++R+RDKL++ L GIR+MG P +++VDT +E LA++EAR+L Sbjct: 121 NFDDVAGSGRTKKELLQMKRERDKLEKTLGGIREMGRTPSAVWIVDTKKEHLAVEEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS--YMGADTK 238 RIPIV ++DTN +PD VD+ IPGNDD+ R++ L +VA A +G+ + G + Sbjct: 181 RIPIVGILDTNCDPDEVDFPIPGNDDAIRAVGLLTRVVADAVAEGLIARSGGKTEGTEGA 240 Query: 239 SAGETVVHSKEGMQLEEDSQSSE 261 +A E + + + ++ ++ Sbjct: 241 TAEEPLAEWERELLATPAAEEAK 263 >gi|227875943|ref|ZP_03994066.1| ribosomal protein S2 [Mobiluncus mulieris ATCC 35243] gi|269977910|ref|ZP_06184864.1| ribosomal protein S2 [Mobiluncus mulieris 28-1] gi|306819222|ref|ZP_07452933.1| 30S ribosomal protein S2 [Mobiluncus mulieris ATCC 35239] gi|307700232|ref|ZP_07637273.1| ribosomal protein S2 [Mobiluncus mulieris FB024-16] gi|227843475|gb|EEJ53661.1| ribosomal protein S2 [Mobiluncus mulieris ATCC 35243] gi|269933876|gb|EEZ90456.1| ribosomal protein S2 [Mobiluncus mulieris 28-1] gi|304648004|gb|EFM45318.1| 30S ribosomal protein S2 [Mobiluncus mulieris ATCC 35239] gi|307614614|gb|EFN93842.1| ribosomal protein S2 [Mobiluncus mulieris FB024-16] Length = 279 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 114/276 (41%), Positives = 168/276 (60%), Gaps = 2/276 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I +R+ +I+DL QT+ + A + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTDRSGIYILDLQQTLADIDIAFDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTMLFVGTKKQAQESIQEQATRVGMPYVNQRWLGGMLTNFATVHKRLQRLKELEQY 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + GFTKKE L + R++DKL + L GIRDM P +++VVDT +E LAI EA++L Sbjct: 121 DFEDTASTGFTKKELLMMRREKDKLAKTLGGIRDMNKTPSMLWVVDTKKEHLAISEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVA++DTN +PD VDY IPGNDD+ R++ L ++A A +G+ Q + Sbjct: 181 GIPIVAILDTNCDPDEVDYGIPGNDDAIRAVDLLTKIIADACAEGLVEQSKKQMGEGGQD 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 E + + + E +Q+ + + E Sbjct: 241 AEPMAEWERDLLQGEAAQTPVETPDEAANPEATHET 276 >gi|261407950|ref|YP_003244191.1| 30S ribosomal protein S2 [Paenibacillus sp. Y412MC10] gi|329929325|ref|ZP_08283078.1| ribosomal protein S2 [Paenibacillus sp. HGF5] gi|261284413|gb|ACX66384.1| ribosomal protein S2 [Paenibacillus sp. Y412MC10] gi|328936694|gb|EGG33137.1| ribosomal protein S2 [Paenibacillus sp. HGF5] Length = 232 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 152/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+++IF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDKFIFTERNGIYIIDLQKTVKKVEEAFNFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA D V E A+R + +N +WLGG +TN++T+ + I +L+ LE Sbjct: 61 AGENGTILFVGTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFETIQKRINRLKQLETW 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + Q KKE + + +++D+L++ L GI++M GLP +FV+D +E++A+ EAR+L Sbjct: 121 EEDGTFQVLPKKEVILLRKEKDRLEKFLGGIKNMKGLPSALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPIV +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVEAHQGEETTA 232 >gi|284929067|ref|YP_003421589.1| 30S ribosomal protein S2P [cyanobacterium UCYN-A] gi|284809526|gb|ADB95231.1| SSU ribosomal protein S2P [cyanobacterium UCYN-A] Length = 272 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 104/269 (38%), Positives = 165/269 (61%), Gaps = 5/269 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + Sbjct: 1 MPVVSLSELLESGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNG 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 SDKGKRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE ++L Sbjct: 121 EESGQIEKRPKKEGAVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+++++DTN +PD D IP NDD+ RSI L +A A +G R+ + D +++ Sbjct: 181 IPMISLLDTNCDPDYADIPIPANDDAIRSIKLILGKLADAIDEGSHRRVNA-NDDYETSD 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E+ + + ++ E+S S SS L+G+ + Sbjct: 240 ESFIEN--NIEKIEESTSV-SSSLEGENI 265 >gi|332289927|ref|YP_004420779.1| 30S ribosomal protein S2 [Gallibacterium anatis UMN179] gi|330432823|gb|AEC17882.1| 30S ribosomal protein S2 [Gallibacterium anatis UMN179] Length = 249 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 154/230 (66%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL+ + Sbjct: 1 MAQVTMREMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTLPMFNAALEELKRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK A+D V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AQNNGKILFVGTKRAATDPVQAAALDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKDMGGLPDALFVIAADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+ A+VDTNS+PD VDYVIPGNDD+ R+I L+ A A +G A+ Sbjct: 181 IPVFAIVDTNSDPDGVDYVIPGNDDAVRAIQLYLTAAADAVKEGKAQAQG 230 >gi|313888298|ref|ZP_07821969.1| ribosomal protein S2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845701|gb|EFR33091.1| ribosomal protein S2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 257 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 97/261 (37%), Positives = 156/261 (59%), Gaps = 5/261 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM+R+IF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKSLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKVEEAYDFVREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 A GG +LFV TK QA D + + A + +N +WLGG++TN+KT+ I++L + E Sbjct: 61 AANGGEVLFVGTKKQAQDAIEKEATKCGMPYINQRWLGGLLTNYKTIKNRIERLYKLYEM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + +R+KL++ L GI++M G+P +FVVD +E +A++EA L Sbjct: 121 EENGTFDVLPKKEVAQLLHEREKLEKFLGGIKEMKGMPKALFVVDPKKENIAVKEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +P+ VD IPGNDD+ R++ L + +A+A I+G + Sbjct: 181 IPVIGIVDTNCDPEEVDIPIPGNDDAIRAVKLITETIANAVIEGKQGSQ----IEDTDYD 236 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 E+ E +E++ + E Sbjct: 237 ESTQEVSEEEAVEDEKSAIEE 257 >gi|212710397|ref|ZP_03318525.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM 30120] gi|212686979|gb|EEB46507.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM 30120] Length = 241 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD +D+VIPGNDD+ R+I L+ VA+ +G ++ + + Sbjct: 181 IPVFAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVANTVREGRSQDLAVQAEENLVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|253988125|ref|YP_003039481.1| 30S ribosomal protein S2 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779575|emb|CAQ82736.1| 30s ribosomal protein s2 [Photorhabdus asymbiotica] Length = 241 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ V E+A+ QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AARKGKILFVGTKRAASEAVKESAQSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALIRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFAVVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|239636266|ref|ZP_04677268.1| ribosomal protein S2 [Staphylococcus warneri L37603] gi|239597621|gb|EEQ80116.1| ribosomal protein S2 [Staphylococcus warneri L37603] Length = 262 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 105/267 (39%), Positives = 172/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA D V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQDSVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKTMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ E + ++ + E++ ++ Sbjct: 236 EQNINLDEKEESDKAETTEENTSVESN 262 >gi|298492970|ref|YP_003723147.1| 30S ribosomal protein S2 ['Nostoc azollae' 0708] gi|298234888|gb|ADI66024.1| ribosomal protein S2 ['Nostoc azollae' 0708] Length = 264 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 100/260 (38%), Positives = 145/260 (55%), Gaps = 10/260 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MAVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTSRNGVHIIDLVQTAQLMDNAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ ++L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEAARCGSHYINQRWLGGMLTNWATIKTRAERLKDLERR 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE +L Sbjct: 121 EENGALDLLPKKEGSMLRREMTKLQKYLGGIKNMRKVPDVVIIVDQRREYNAVQECEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +PD+VD IP NDD+ RSI L +A A +G Q G Sbjct: 181 IPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQLEAEGD------ 234 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 EG + + D SE Sbjct: 235 ---YEDYEGAEDDYDYDESE 251 >gi|52080252|ref|YP_079043.1| 30S ribosomal protein S2 [Bacillus licheniformis ATCC 14580] gi|52785629|ref|YP_091458.1| 30S ribosomal protein S2 [Bacillus licheniformis ATCC 14580] gi|319645968|ref|ZP_08000198.1| 30S ribosomal protein S2 [Bacillus sp. BT1B_CT2] gi|81691069|sp|Q65JJ9|RS2_BACLD RecName: Full=30S ribosomal protein S2 gi|52003463|gb|AAU23405.1| ribosomal protein S2 [Bacillus licheniformis ATCC 14580] gi|52348131|gb|AAU40765.1| RpsB [Bacillus licheniformis ATCC 14580] gi|317391718|gb|EFV72515.1| 30S ribosomal protein S2 [Bacillus sp. BT1B_CT2] Length = 246 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 99/226 (43%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V E A+RS Y VN +WLGG +TN++T+ + I++L+D+E++ Sbjct: 61 AADGGKILFVGTKKQAQDSVKEEAERSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + ++++ ++L++ L GI++M LPD +F++D +E++A+ EAR+L Sbjct: 121 QENGTFDVLPKKEVVQLKKELERLEKFLGGIKEMKELPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+ +VDTN +PD +D VIP NDD+ R++ L +A A ++ Sbjct: 181 IPIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAKQ 226 >gi|319892271|ref|YP_004149146.1| SSU ribosomal protein S2p (SAe) [Staphylococcus pseudintermedius HKU10-03] gi|317161967|gb|ADV05510.1| SSU ribosomal protein S2p (SAe) [Staphylococcus pseudintermedius HKU10-03] gi|323464632|gb|ADX76785.1| ribosomal protein S2 [Staphylococcus pseudintermedius ED99] Length = 265 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 104/269 (38%), Positives = 166/269 (61%), Gaps = 6/269 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Y VN +WLGG++TN+KT+S+ +Q++ ++E++ Sbjct: 61 SEEGGKVLFVGTKKQAQESVKAEAERAGHYYVNQRWLGGILTNYKTISKRVQRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L + L GIR+M +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGTFDVLPKKEVVELKKEYDRLIKFLGGIREMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E + E E +S + + E Sbjct: 236 EQDIDLTEDETAEGESTEATENTEATVES 264 >gi|302525188|ref|ZP_07277530.1| ribosomal protein S2 [Streptomyces sp. AA4] gi|302434083|gb|EFL05899.1| ribosomal protein S2 [Streptomyces sp. AA4] Length = 297 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 115/255 (45%), Positives = 166/255 (65%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SGV FGH+ WNPKM+RYIF ERN +IIDL QT+ + +A + I +T Sbjct: 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQQTLTYIDRAYEFIKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG I+FV TK QA + + A R VN +WLGGM+TN++TV + + +L++LE Sbjct: 61 VAHGGTIMFVGTKKQAQEAIANEAARVGMPYVNQRWLGGMLTNFQTVHKRLLRLKELEAQ 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 G TK+E L + R++DKL++ L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 EQTGGFAGLTKREILTLTREKDKLEKTLGGIRDMAKVPSAVWIVDTKKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PD VDY IPGNDD+ RS AL +VA AA G+ + GA + Sbjct: 181 IPVVAILDTNCDPDEVDYPIPGNDDAIRSAALLTKVVAEAAAAGLMARSGRNGASADAKP 240 Query: 242 ETVVHSKEGMQLEED 256 ET + + E++ Sbjct: 241 ETGASDEPLAEWEKE 255 >gi|152965383|ref|YP_001361167.1| ribosomal protein S2 [Kineococcus radiotolerans SRS30216] gi|189044942|sp|A6W7W4|RS2_KINRD RecName: Full=30S ribosomal protein S2 gi|151359900|gb|ABS02903.1| ribosomal protein S2 [Kineococcus radiotolerans SRS30216] Length = 311 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 114/269 (42%), Positives = 174/269 (64%), Gaps = 5/269 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R++F ERN +IIDL Q++ + +A + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFLFTERNGIYIIDLQQSLSFIDRAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG I+F+ TK QA + + E A+R VN +WLGGM+TN++TV++ I ++R+LE+ Sbjct: 61 VAHGGSIMFIGTKKQAQESIAEQARRVGMPFVNQRWLGGMLTNFQTVNKRIARMRELEQV 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R+ DKL + L GIR+M +P +++VDTN+E LA+ EA++L Sbjct: 121 DFDDVAGSGLTKKELLVLRREYDKLTKTLGGIREMTKVPSAVWIVDTNKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +PD VDY IPGNDD+ RS+ L ++A A +G+ +H G + +A Sbjct: 181 NIPVVAILDSNCDPDDVDYRIPGNDDAIRSVTLLTRVIADAVAEGLQVRH---GGKSDAA 237 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQE 269 ++ + +E QS S + E Sbjct: 238 EPLAAWEQDLLAGDEGVQSGGSESVATVE 266 >gi|116333955|ref|YP_795482.1| ribosomal protein S2 [Lactobacillus brevis ATCC 367] gi|122269361|sp|Q03QS1|RS2_LACBA RecName: Full=30S ribosomal protein S2 gi|116099302|gb|ABJ64451.1| SSU ribosomal protein S2P [Lactobacillus brevis ATCC 367] Length = 267 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 110/269 (40%), Positives = 168/269 (62%), Gaps = 5/269 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKQYIFTERNGIYIIDLQKTVKLIDAAYNYMKDE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G +LFV TK QA D + E A R+ QY VN +WLGG +TNW+T+ I++L+ L+++ Sbjct: 61 AAKGAVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWETIQTRIKRLKSLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +++ +DKL+R L GI DM LPD+MF+VD +E++A+ EA++L Sbjct: 121 ATDGTFDVLPKKEVSLLKKSQDKLERFLGGIEDMPKLPDVMFIVDPRKEQIAVHEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D VIP NDD+ R++ L +A A ++G + D K+ Sbjct: 181 IPIVAMVDTNTDPDEIDVVIPSNDDAIRAVRLITSKMADAIVEG---RQGEDQVDEKTFE 237 Query: 242 ETVVHSKEGMQLEED-SQSSESSVLDGQE 269 + EG + D S + ++G Sbjct: 238 GQKSEAAEGDKKTADNSMEDIVNAVEGDN 266 >gi|325673459|ref|ZP_08153150.1| 30S ribosomal protein S2 [Rhodococcus equi ATCC 33707] gi|325555480|gb|EGD25151.1| 30S ribosomal protein S2 [Rhodococcus equi ATCC 33707] Length = 271 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 113/249 (45%), Positives = 161/249 (64%), Gaps = 5/249 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLL+SG FGH+ WNPKM+R+IF +RN +IIDL QT+ + KA + + +TVA GG Sbjct: 1 MRQLLDSGAHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDKAYEFVKETVAHGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 ILFV TK QA + + A R VN +WLGGM+TN+ TV + +Q+L++LE + Sbjct: 61 TILFVGTKKQAQESIAGEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELESMEQTGG 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G TKKE L + R+ KL R L GIRDM +P ++VVDTN+E +A+ EAR+L IP++A Sbjct: 121 FEGRTKKEILMLTREMTKLDRTLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLNIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM----GADTKSAGE 242 ++DTN +PD+VDY IPGNDD+ RS AL +VASA +G+ + GE Sbjct: 181 ILDTNCDPDVVDYPIPGNDDAIRSAALLTKVVASAVAEGLQARAGASADKDAKPEAGTGE 240 Query: 243 TVVHSKEGM 251 + ++ + Sbjct: 241 PLAEWEQEL 249 >gi|227488619|ref|ZP_03918935.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227543222|ref|ZP_03973271.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51866] gi|227091513|gb|EEI26825.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227181031|gb|EEI62003.1| 30S ribosomal protein S2 [Corynebacterium glucuronolyticum ATCC 51866] Length = 283 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 108/278 (38%), Positives = 173/278 (62%), Gaps = 3/278 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDQAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + A+R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQEAIQNEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G KKE L + R+R KL+R L GI DM +P M++VDTN+E +A+ EA +L Sbjct: 121 DQAEDGYAGRGKKEILMLTRERTKLERVLGGIADMSKIPSAMWIVDTNKEHIAVSEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY +PGNDD+ R+ + ++++A +G + K A Sbjct: 181 NIPVVAILDTNCDPDEVDYPVPGNDDAIRATTVLTRVISTAVEEGQKARKERELEAAKKA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + +E E S + ++ + V P++ + Sbjct: 241 AGDD-NKEEVAPKVEASSEEVAPKVEESKEEVAPKVEA 277 >gi|296101337|ref|YP_003611483.1| 30S ribosomal protein S2 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055796|gb|ADF60534.1| 30S ribosomal protein S2 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 241 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLSAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|119487918|ref|ZP_01621415.1| 30S ribosomal protein S2 [Lyngbya sp. PCC 8106] gi|119455494|gb|EAW36632.1| 30S ribosomal protein S2 [Lyngbya sp. PCC 8106] Length = 277 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 98/241 (40%), Positives = 147/241 (60%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ ++LESGV FGH+ WNPKM YI+ ERN HIIDL QT ++++A + I + Sbjct: 1 MPVISLAEMLESGVHFGHQTRRWNPKMAPYIYTERNGVHIIDLLQTAQLMEEAYEYIRSS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A+R Y VN +WLGGM+TNW T+ + +L++LE Sbjct: 61 SEQGKKFLFVGTKRQAAGIIAQEAQRCGGYYVNQRWLGGMLTNWTTIKTRVDRLKELEYR 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ +KL++ L GI+ M +PD + ++D RE A+ E R+L Sbjct: 121 QESGQLDYLPKKEASMLRRELEKLQKYLGGIKLMRRIPDAVVMIDQRREHNAVMECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A++DTN +PDL D IP NDD+ R+I L A A +G +H + D+ A Sbjct: 181 IPIIAMLDTNCDPDLADIHIPANDDAIRAIKLIVGKFADAIYEG---RHGELETDSDFAE 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|258516355|ref|YP_003192577.1| 30S ribosomal protein S2 [Desulfotomaculum acetoxidans DSM 771] gi|257780060|gb|ACV63954.1| ribosomal protein S2 [Desulfotomaculum acetoxidans DSM 771] Length = 248 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 148/225 (65%), Gaps = 1/225 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++QLLESGV FGH+ WNPKM YIF +RN +IIDL +TV M+ A I D G Sbjct: 21 SMKQLLESGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKMVDVAYNFIKDLALSG 80 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 +LFV TK QA + V E A++ + VN +WLGGM+TN++T+ + I +L +L+ + + Sbjct: 81 ETLLFVGTKKQAQESVKEEAEKCGMFYVNQRWLGGMLTNFQTIRKRIDRLHELDRMEADG 140 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 KKE + ++++L++ L GI++M LP +FVVD +E++A+ EAR+L IPIV Sbjct: 141 TFSLLPKKEVAELMHEKERLQKFLGGIKEMKRLPAALFVVDPRKERIAVAEARKLGIPIV 200 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 A+VDTN +PD +DY+IPGNDD+ R++ L +A A ++G + Sbjct: 201 AIVDTNCDPDEIDYIIPGNDDAIRAVRLLTSKMAEAVLEGKQGEQ 245 >gi|188533036|ref|YP_001906833.1| 30S ribosomal protein S2 [Erwinia tasmaniensis Et1/99] gi|238689728|sp|B2VE05|RS2_ERWT9 RecName: Full=30S ribosomal protein S2 gi|188028078|emb|CAO95935.1| 30S ribosomal protein S2 [Erwinia tasmaniensis Et1/99] Length = 241 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELSKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G ++ + +T + Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVAATVREGRSQDLAQQAEETFAEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|282850146|ref|ZP_06259525.1| ribosomal protein S2 [Veillonella parvula ATCC 17745] gi|294791798|ref|ZP_06756946.1| ribosomal protein S2 [Veillonella sp. 6_1_27] gi|294793659|ref|ZP_06758796.1| ribosomal protein S2 [Veillonella sp. 3_1_44] gi|282579639|gb|EFB85043.1| ribosomal protein S2 [Veillonella parvula ATCC 17745] gi|294455229|gb|EFG23601.1| ribosomal protein S2 [Veillonella sp. 3_1_44] gi|294457028|gb|EFG25390.1| ribosomal protein S2 [Veillonella sp. 6_1_27] Length = 250 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 101/244 (41%), Positives = 155/244 (63%), Gaps = 1/244 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + Sbjct: 61 ASQGEVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + + DKL++ L GI+DM +P +FVVD +EK+AI EA++L Sbjct: 121 AEDGTFEVLPKKEVIGLRHEMDKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA VDTN +PD VD+ IP NDD+ R++ L +A A ++G + D A Sbjct: 181 IPVVATVDTNCDPDEVDFPIPANDDAIRAVKLLAGKMADAVLEGRQGESFEEALDNMVAD 240 Query: 242 ETVV 245 + Sbjct: 241 SAEM 244 >gi|312868999|ref|ZP_07729176.1| ribosomal protein S2 [Lactobacillus oris PB013-T2-3] gi|311095425|gb|EFQ53692.1| ribosomal protein S2 [Lactobacillus oris PB013-T2-3] Length = 262 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD++F+VD ++E++A++EA++L Sbjct: 121 AEDGTFDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVLFIVDPHKEQIAVKEAQKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN++PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVAMVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAIVEGKQ 226 >gi|116618299|ref|YP_818670.1| SSU ribosomal protein S2P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431624|ref|ZP_03913660.1| ribosomal protein S2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122271501|sp|Q03WX5|RS2_LEUMM RecName: Full=30S ribosomal protein S2 gi|116097146|gb|ABJ62297.1| SSU ribosomal protein S2P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352616|gb|EEJ42806.1| ribosomal protein S2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 258 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 108/255 (42%), Positives = 164/255 (64%), Gaps = 8/255 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A I + Sbjct: 1 MAVISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFIRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DL+ + Sbjct: 61 STDGANVLFVGTKKQASDAIAEEATRAGQYYINHRWLGGTLTNWNTIKTRIQRLKDLQTM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++R+KL++ L GI+DM GLPD++FVVD +E++A++EA L Sbjct: 121 AEDGTFEQLPKKEVVLLNKQREKLEKFLGGIQDMPGLPDVLFVVDPKKEEIAVKEANMLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN+NPD+VD IP NDD+ R++ L +A A I+G Q S + Sbjct: 181 IPVVAMIDTNANPDVVDVKIPANDDAIRAVRLITSKIADAVIEGRQGQDS-------APE 233 Query: 242 ETVVHSKEGMQLEED 256 + V E + E+ Sbjct: 234 DAFVEGDENTESIEE 248 >gi|156935316|ref|YP_001439232.1| 30S ribosomal protein S2 [Cronobacter sakazakii ATCC BAA-894] gi|260596589|ref|YP_003209160.1| 30S ribosomal protein S2 [Cronobacter turicensis z3032] gi|166225270|sp|A7MGT2|RS2_ENTS8 RecName: Full=30S ribosomal protein S2 gi|156533570|gb|ABU78396.1| hypothetical protein ESA_03173 [Cronobacter sakazakii ATCC BAA-894] gi|260215766|emb|CBA28177.1| 30S ribosomal protein S2 [Cronobacter turicensis z3032] Length = 241 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ + VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAVAATVREGRSQDLAAQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|256847038|ref|ZP_05552484.1| ribosomal protein S2 [Lactobacillus coleohominis 101-4-CHN] gi|256715702|gb|EEU30677.1| ribosomal protein S2 [Lactobacillus coleohominis 101-4-CHN] Length = 260 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 107/251 (42%), Positives = 162/251 (64%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV M+ A + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWNPKMEPYIFTERNGIYIIDLQKTVKMIDSAYDYVKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ Sbjct: 61 AADGGVVLFVGTKKQAQDSIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRINRLKELKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R+KL+R L GI DM +PD++++VD ++E++A++EA +L Sbjct: 121 SEDGTFDVLPKKEVSVLTKQREKLERFLGGIEDMPRIPDVIYIVDPHKEQIAVREAHKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D +IP NDD+ R++ L +A A I+G Q A Sbjct: 181 IPIVAMVDTNTDPDDIDVIIPSNDDAIRAVRLITSKMADAVIEGKQGQDDQQQASDDDVA 240 Query: 242 ETVVHSKEGMQ 252 + S++ +Q Sbjct: 241 DNAEVSEDSLQ 251 >gi|158320545|ref|YP_001513052.1| ribosomal protein S2 [Alkaliphilus oremlandii OhILAs] gi|167011231|sp|A8MHG9|RS2_ALKOO RecName: Full=30S ribosomal protein S2 gi|158140744|gb|ABW19056.1| ribosomal protein S2 [Alkaliphilus oremlandii OhILAs] Length = 232 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 109/232 (46%), Positives = 159/232 (68%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A V+ D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMGEYIFTERNGIYIIDLQKTVKKVEEAYSVMKDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA + V E AKRS Y VN +WLGGM+TN+KT+ + I++LR+LE++ Sbjct: 61 ATEGGTILFVGTKKQAQEAVEEEAKRSGMYFVNQRWLGGMLTNFKTIKKRIERLRELEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + +++KL++ L GI+DM +PD +FVVD +E++AIQEA L Sbjct: 121 EEDGTFEVLPKKEVIKLRHEQEKLEKFLGGIKDMTEMPDALFVVDPRKERIAIQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP++++VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G + Sbjct: 181 IPVISIVDTNCDPDEVDYVIPGNDDAIRAVKLIASTMANAIIEGKQGVQTEA 232 >gi|306836379|ref|ZP_07469357.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49726] gi|304567739|gb|EFM43326.1| 30S ribosomal protein S2 [Corynebacterium accolens ATCC 49726] Length = 298 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 113/270 (41%), Positives = 170/270 (62%), Gaps = 2/270 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 22 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 81 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 82 VAHGGTILFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 141 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +E+ G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A++EA +L Sbjct: 142 DEREDGYKGRTKKEVLMLNRERAKLERVLGGISEMAKTPSALWIVDTNKEHIAVKEAHKL 201 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ RS L +VASA +G + A K A Sbjct: 202 NIPVVAILDTNCDPDDVDFPIPGNDDAIRSTKLLSGIVASAVEEGKKAREERQLAAAKEA 261 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 ++ + S +S +E Sbjct: 262 AGDSAEKEQRDAEAAAAASDPASAEKAEEA 291 >gi|326693029|ref|ZP_08230034.1| 30S ribosomal protein S2 [Leuconostoc argentinum KCTC 3773] Length = 258 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 108/255 (42%), Positives = 163/255 (63%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ W+PKM+ +IF ERN HIIDL +TV ++ +A + + Sbjct: 1 MAVISMKELLEAGVHFGHQTRRWDPKMDEFIFTERNGIHIIDLQKTVKLVDEAYNFMRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 61 SADGATFLFVGTKKQASDAIAEEATRAGQYYINHRWLGGTLTNWNTIKTRIQRLKDLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L Sbjct: 121 AEDGTFDQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S Sbjct: 181 IPVVAMIDTNANPEVVDVKIPANDDAIRAVRLITSKMADAIIEGRQGQDSAPEDAFVEGD 240 Query: 242 ETVVHSKEGMQLEED 256 ET +E + + E+ Sbjct: 241 ETTESIEEIVSIVEE 255 >gi|282898427|ref|ZP_06306417.1| Ribosomal protein S2 [Raphidiopsis brookii D9] gi|281196593|gb|EFA71499.1| Ribosomal protein S2 [Raphidiopsis brookii D9] Length = 263 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAQLMDDAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEANRCGSHYINQRWLGGMLTNWATIKTRADRLKDLERR 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE ++L Sbjct: 121 EENGALDLLPKKEASMLRREMSKLQKYLGGIKNMRKVPDVVIIVDQRREYNAVQECQKLS 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPIV+++DTN +PD VD IP NDD+ RSI L +A A +G Q Sbjct: 181 IPIVSMLDTNCDPDTVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQ 228 >gi|253578261|ref|ZP_04855533.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850579|gb|EES78537.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 247 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 104/254 (40%), Positives = 157/254 (61%), Gaps = 8/254 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A I+D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAIADI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D + A+R Q+ VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 61 VADGGSILFVGTKKQAQDAIKTEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKEIEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ KL++ + GI++M LPD +F+VD +E++ +QEA L Sbjct: 121 EADGTFDVLPKKEVIELKKELAKLQKNIGGIKEMKRLPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + G Sbjct: 181 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQ-------GTADADG 233 Query: 242 ETVVHSKEGMQLEE 255 E S+E EE Sbjct: 234 EIEAESEEFAATEE 247 >gi|197303770|ref|ZP_03168807.1| hypothetical protein RUMLAC_02500 [Ruminococcus lactaris ATCC 29176] gi|197297290|gb|EDY31853.1| hypothetical protein RUMLAC_02500 [Ruminococcus lactaris ATCC 29176] Length = 255 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 100/224 (44%), Positives = 150/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDI 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I++L+D+E + Sbjct: 66 AADGGTILFVGTKKQAQDAIKAEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKDIEAM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ DKL++ L GI+DM LPD +F+VD +E++ +QEA L Sbjct: 126 AEDGTFDVLPKKEVIELKKEWDKLEKNLGGIKDMKKLPDAIFIVDPKKERICVQEAHTLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 186 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 229 >gi|311280862|ref|YP_003943093.1| ribosomal protein S2 [Enterobacter cloacae SCF1] gi|308750057|gb|ADO49809.1| ribosomal protein S2 [Enterobacter cloacae SCF1] Length = 241 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVATTVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|256824964|ref|YP_003148924.1| 30S ribosomal protein S2P [Kytococcus sedentarius DSM 20547] gi|256688357|gb|ACV06159.1| SSU ribosomal protein S2P [Kytococcus sedentarius DSM 20547] Length = 310 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 115/251 (45%), Positives = 167/251 (66%), Gaps = 5/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q++ L +A + + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSLTYLNEAHEFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG +LFV TK QA + + E A R VN +WLGGM+TN++TV + +++L++LE Sbjct: 61 VAHGGSVLFVGTKKQAQETIAEQATRVGMPYVNHRWLGGMLTNFQTVHKRLERLKELETI 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + N G TKKE L ++R+ DKL R L GIRDM P ++VVDT +E LA+ EAR+L Sbjct: 121 DFEDVANSGRTKKELLVLKRELDKLDRTLGGIRDMSRTPSAVWVVDTKKEHLAVTEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIP++A++DTN +PD VDY +PGNDD+ RS++L ++A AA +G+ + G +A Sbjct: 181 RIPVIAILDTNCDPDEVDYAVPGNDDAIRSVSLLTRIIADAAAEGLMAR---SGGGNAAA 237 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 238 EEPMAEWEREL 248 >gi|283783953|ref|YP_003363818.1| 30S ribosomal protein S2 [Citrobacter rodentium ICC168] gi|282947407|emb|CBG86952.1| 30S ribosomal protein S2 [Citrobacter rodentium ICC168] Length = 241 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|222100791|ref|YP_002535359.1| 30S ribosomal protein S2 [Thermotoga neapolitana DSM 4359] gi|221573181|gb|ACM23993.1| 30S ribosomal protein S2 [Thermotoga neapolitana DSM 4359] Length = 265 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 106/247 (42%), Positives = 162/247 (65%), Gaps = 3/247 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 +++ T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + Sbjct: 4 LSVAVVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVR 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + G ILFV TK QA + A+R + VN++WLGG++TN+KT+ I KL +LE Sbjct: 64 EKASEGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIDKLIELE 123 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ + + KKE+ I R +KL++ L G+++M LPD++++VD +EK+A+ EA + Sbjct: 124 EMEQSGKLDELPKKEQSRIRRVLEKLRKNLGGLKEMRKLPDIVYIVDPRKEKIAVAEANK 183 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A A ++G R+ + + + +S Sbjct: 184 LGIPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIADAYLEG--REGAPLTTEEES 241 Query: 240 AGETVVH 246 E V Sbjct: 242 KVEETVE 248 >gi|260881835|ref|ZP_05405336.2| ribosomal protein S2 [Mitsuokella multacida DSM 20544] gi|260847798|gb|EEX67805.1| ribosomal protein S2 [Mitsuokella multacida DSM 20544] Length = 254 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 153/230 (66%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + Sbjct: 14 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYAFLRSV 73 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + E A R+ Q+ VN +WLGGMMTN++T+ + I +L++LE + Sbjct: 74 AEEGKSVLFVGTKKQAQEAIKEEATRAGQFYVNERWLGGMMTNFRTIQKRIARLKELEAM 133 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + + +KL++ L GI++M LP +F+VD +E++A+ EAR+L Sbjct: 134 EADGTFEVLTKKEVQGLRHEMEKLEQYLGGIKEMNKLPGALFIVDPRKERIAVAEARKLN 193 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G + S Sbjct: 194 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGRMADAVLEGRQGEDS 243 >gi|37524673|ref|NP_928017.1| 30S ribosomal protein S2 [Photorhabdus luminescens subsp. laumondii TTO1] gi|61215677|sp|Q7N8P7|RS2_PHOLL RecName: Full=30S ribosomal protein S2 gi|36784098|emb|CAE12967.1| 30S ribosomal subunit protein S2 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 241 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA+ Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKEAAQNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALIRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFAVVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|116620034|ref|YP_822190.1| 30S ribosomal protein S2 [Candidatus Solibacter usitatus Ellin6076] gi|122255565|sp|Q02AL1|RS2_SOLUE RecName: Full=30S ribosomal protein S2 gi|116223196|gb|ABJ81905.1| SSU ribosomal protein S2P [Candidatus Solibacter usitatus Ellin6076] Length = 303 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 117/278 (42%), Positives = 176/278 (63%), Gaps = 8/278 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M + A + + + Sbjct: 1 MPAISMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKDAARFVGEM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G +LFV TK QA + + E A R Y VN +WLGG++TN TV +SI++L++LE + Sbjct: 61 AAQGKNVLFVGTKRQAQEAIAEEANRCQMYYVNQRWLGGLLTNMLTVQKSIKRLKELEAM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G KKE + +ER+R L + L GI+DM GLPD++FV+D+N+E +A++EARRL Sbjct: 121 ASVEGGYAGRPKKEVIRLERERKHLDQNLSGIKDMPGLPDVLFVIDSNKEGIAVKEARRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG------ 234 IP+VA+VDTN +PD VD+VIPGNDD+ R+I LF +A A ++G A Sbjct: 181 GIPVVAIVDTNCDPDEVDWVIPGNDDALRAIRLFASKIADAVVEGRALATEQDFTADKII 240 Query: 235 ADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 +D A E ++ E + + + S+ +E A Sbjct: 241 SDETPAEEGMMEYTEYVDPKYAEKIMAESLSMAEEPAP 278 >gi|326388630|ref|ZP_08210223.1| 30S ribosomal protein S2 [Novosphingobium nitrogenifigens DSM 19370] gi|326206881|gb|EGD57705.1| 30S ribosomal protein S2 [Novosphingobium nitrogenifigens DSM 19370] Length = 251 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 124/248 (50%), Positives = 174/248 (70%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HI+DLSQTVP+ +AL IS Sbjct: 1 MAAPVVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGVRNGIHILDLSQTVPLFARALDFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + +AA+ + Q+ VN +WLGGM+TNWKT+S SI++ + LE Sbjct: 61 ATVQAGGKVLFVGTKRQAQEPIAQAARAAGQHYVNHRWLGGMLTNWKTISGSIKRFKALE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE L + R+RDKL+ +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLSGDTAGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEELAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++D+N +P+ + + IP NDD+SR+I L+C+ VA+AA G G D + Sbjct: 181 GIPVVAILDSNVSPEGIAFPIPANDDASRAIRLYCEAVAAAATRGGRDAAIAAGVDLGAM 240 Query: 241 GETVVHSK 248 V Sbjct: 241 DVPVAEEA 248 >gi|157150122|ref|YP_001451251.1| 30S ribosomal protein S2 [Streptococcus gordonii str. Challis substr. CH1] gi|262283598|ref|ZP_06061363.1| ribosomal protein S2 [Streptococcus sp. 2_1_36FAA] gi|189044990|sp|A8AZP1|RS2_STRGC RecName: Full=30S ribosomal protein S2 gi|157074916|gb|ABV09599.1| ribosomal protein S2 [Streptococcus gordonii str. Challis substr. CH1] gi|262260655|gb|EEY79356.1| ribosomal protein S2 [Streptococcus sp. 2_1_36FAA] Length = 260 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 102/251 (40%), Positives = 164/251 (65%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A I D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFIRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A+R+ QY +N +WLGG +TNW T+ + + +L++++ + Sbjct: 61 AANDAIILFVGTKKQAAEAVKDEAERAGQYYINHRWLGGTLTNWSTIQKRVARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPSNDDAIRAVKLITAKMADAIIEGRQGEDSVESVEAELAA 240 Query: 241 GETVVHSKEGM 251 ET S E + Sbjct: 241 TETQADSIEEI 251 >gi|319789073|ref|YP_004150706.1| ribosomal protein S2 [Thermovibrio ammonificans HB-1] gi|317113575|gb|ADU96065.1| ribosomal protein S2 [Thermovibrio ammonificans HB-1] Length = 287 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 111/247 (44%), Positives = 165/247 (66%), Gaps = 1/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLE+GV FGH+ WNPKM+++IF ERN HIIDL QT+ ++A I+D VA Sbjct: 41 RVTMKELLEAGVHFGHQKERWNPKMKKFIFTERNGIHIIDLQQTIKYFEQAYDYIADLVA 100 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG++LFV TK Q D V E A+R Y VN +WLGG +TN++T+ +S+ KL+ L+++ Sbjct: 101 NGGKVLFVCTKKQGQDIVKEEAERCGMYYVNKRWLGGTLTNFQTIRKSVFKLKMLKKMEE 160 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE + + RK++KL+R + GI +M LPD +F+VD RE+ A++EAR+ IP Sbjct: 161 EGVFDQLPKKEAVRLRRKKEKLERYIGGIENMNRLPDALFIVDIVREENAVREARKAGIP 220 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 IVA+VDTN++PDLVD IP NDD+ R+I L +A A ++G R+ + A+ K E Sbjct: 221 IVALVDTNADPDLVDIPIPANDDAIRAIRLLTSRIADAVLEGKMRREALALAEGKEEEEV 280 Query: 244 VVHSKEG 250 + +E Sbjct: 281 DFNPEEE 287 >gi|304439989|ref|ZP_07399882.1| 30S ribosomal protein S2 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371481|gb|EFM25094.1| 30S ribosomal protein S2 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 251 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 151/238 (63%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKALLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKIEEAYDFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ILFV TK QA D + + A+R +N +WLGG++TN+KT+ + +++L +LEE+ Sbjct: 61 AEENKTILFVGTKKQAQDAIEKEARRCEMPFINQRWLGGLLTNFKTIKKRVERLHNLEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +R++L++ L GI+ M LPD +FVVD +E +A++EA L Sbjct: 121 EEDGTFDVLPKKEVIKLKLERERLEKFLGGIKHMDRLPDCIFVVDPKKEYIAVKEADILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+V ++DTN +PD +DY IPGNDD+ R++ L + +A+A ++G + S Sbjct: 181 IPVVGIIDTNCDPDEIDYPIPGNDDAIRAVKLITETIANAVLEGKQGTQFTDFDEEGS 238 >gi|238893165|ref|YP_002917899.1| 30S ribosomal protein S2 [Klebsiella pneumoniae NTUH-K2044] gi|262044760|ref|ZP_06017807.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330001647|ref|ZP_08304073.1| ribosomal protein S2 [Klebsiella sp. MS 92-3] gi|209573710|sp|A6T4X1|RS2_KLEP7 RecName: Full=30S ribosomal protein S2 gi|238545481|dbj|BAH61832.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037910|gb|EEW39134.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537589|gb|EGF63809.1| ribosomal protein S2 [Klebsiella sp. MS 92-3] Length = 241 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AARKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|329120948|ref|ZP_08249579.1| 30S ribosomal protein S2 [Dialister micraerophilus DSM 19965] gi|327471110|gb|EGF16564.1| 30S ribosomal protein S2 [Dialister micraerophilus DSM 19965] Length = 278 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 99/255 (38%), Positives = 161/255 (63%), Gaps = 3/255 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A I + Sbjct: 26 MSVVSMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKVEEAYNFIREV 85 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + + + A R + VN +WLGGM+TN++T+ + +L++LE++ Sbjct: 86 AANGQTILFVGTKKQAQNAIKDEALRCNMFYVNQRWLGGMLTNFRTIQNRVARLKELEKM 145 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R+ DKL++ L GI+DM LP + V+D+ +E++A++EAR+L Sbjct: 146 FEDGTVEQYPKKEVILMKRELDKLEKNLGGIKDMKKLPGCIVVIDSKKEEIAVKEARKLN 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A VDTN +PD++D+ IP NDD+ R++ L +A A + RQ + Sbjct: 206 IPVIATVDTNCDPDVIDFPIPANDDAIRAVKLLASKMADAVL--EGRQGQQEEQGEQEVA 263 Query: 242 ETVVHSKEGMQLEED 256 E V +E ++ + Sbjct: 264 EDVADEQEVIEESAE 278 >gi|153816486|ref|ZP_01969154.1| hypothetical protein RUMTOR_02739 [Ruminococcus torques ATCC 27756] gi|317500766|ref|ZP_07958983.1| ribosomal protein S2 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089756|ref|ZP_08338650.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846182|gb|EDK23100.1| hypothetical protein RUMTOR_02739 [Ruminococcus torques ATCC 27756] gi|316897859|gb|EFV19913.1| ribosomal protein S2 [Lachnospiraceae bacterium 8_1_57FAA] gi|330403639|gb|EGG83194.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 3_1_46FAA] Length = 248 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 98/224 (43%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD Sbjct: 1 MGVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I++L+++E + Sbjct: 61 AAEGGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKEIETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ KL++ L GI+DM LPD +F+VD +E++ +QEA L Sbjct: 121 SEDGTFDVLPKKEVIELKKEWAKLEKNLGGIKDMKRLPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|284032630|ref|YP_003382561.1| 30S ribosomal protein S2 [Kribbella flavida DSM 17836] gi|283811923|gb|ADB33762.1| ribosomal protein S2 [Kribbella flavida DSM 17836] Length = 328 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 110/232 (47%), Positives = 157/232 (67%), Gaps = 2/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESGV FGH+ WNPKM+RYI ERN +IIDL Q++ + +A + + T Sbjct: 1 MAVVTMKQLLESGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQSLSYIDRAYEFVRST 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG ILFV TK QA + + E A R VN +WLGGM+TN++TV++ +Q+L++LE Sbjct: 61 VASGGAILFVGTKKQAQEAIAEQATRVGMPYVNQRWLGGMLTNFQTVNKRLQRLKELELI 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L R+ DKL + L GIRDMG +P +++VDT +E LA+ EAR+L Sbjct: 121 DFDDVAGSGVTKKELLQKRREHDKLLKTLGGIRDMGRVPSAVWIVDTKKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 ++PI+ ++DTN +PD VD+ IPGNDD+ RS+ L +VA A DG+ + Sbjct: 181 KLPIIGILDTNCDPDEVDFPIPGNDDAIRSVGLLTRVVADAVADGLMARSGQ 232 >gi|50119971|ref|YP_049138.1| 30S ribosomal protein S2 [Pectobacterium atrosepticum SCRI1043] gi|61215524|sp|Q6D8E3|RS2_ERWCT RecName: Full=30S ribosomal protein S2 gi|49610497|emb|CAG73942.1| 30S ribosomal protein S2 [Pectobacterium atrosepticum SCRI1043] Length = 241 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM AL + Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLENTVPMFNDALAELGKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V ++A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDSANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G ++ + + Sbjct: 181 IPVFAVVDTNSDPDGVDFIIPGNDDAIRAINLYLGAVATAVREGRSQDLAVQAEEGLVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|229086380|ref|ZP_04218556.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-44] gi|228696896|gb|EEL49705.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-44] Length = 233 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 156/229 (68%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A V+ D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFNVMRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + Sbjct: 61 AAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L Sbjct: 121 QEDGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 229 >gi|157147401|ref|YP_001454720.1| 30S ribosomal protein S2 [Citrobacter koseri ATCC BAA-895] gi|166225259|sp|A8ALC1|RS2_CITK8 RecName: Full=30S ribosomal protein S2 gi|157084606|gb|ABV14284.1| hypothetical protein CKO_03199 [Citrobacter koseri ATCC BAA-895] Length = 241 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|329733661|gb|EGG69989.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus 21193] Length = 262 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 101/260 (38%), Positives = 167/260 (64%), Gaps = 4/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Q + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEG---QQGVSNEEVAAEQ 237 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 + KE + ++ ++++ Sbjct: 238 NIDLDEKENQKKQKQLKNNQ 257 >gi|206581012|ref|YP_002240343.1| ribosomal protein S2 [Klebsiella pneumoniae 342] gi|288937049|ref|YP_003441108.1| ribosomal protein S2 [Klebsiella variicola At-22] gi|290512470|ref|ZP_06551836.1| 30S ribosomal protein S2 [Klebsiella sp. 1_1_55] gi|238058198|sp|B5Y1K2|RS2_KLEP3 RecName: Full=30S ribosomal protein S2 gi|206570070|gb|ACI11846.1| ribosomal protein S2 [Klebsiella pneumoniae 342] gi|288891758|gb|ADC60076.1| ribosomal protein S2 [Klebsiella variicola At-22] gi|289774811|gb|EFD82813.1| 30S ribosomal protein S2 [Klebsiella sp. 1_1_55] Length = 241 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|271499495|ref|YP_003332520.1| 30S ribosomal protein S2 [Dickeya dadantii Ech586] gi|270343050|gb|ACZ75815.1| ribosomal protein S2 [Dickeya dadantii Ech586] Length = 241 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 166/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQKRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VDY+IPGNDD+ R+++L+ + VA+A +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDYIIPGNDDAIRAVSLYLNAVAAAVREGRSQDLAAQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|49082262|gb|AAT50531.1| PA3656 [synthetic construct] Length = 247 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 116/249 (46%), Positives = 161/249 (64%), Gaps = 4/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD + Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD-EFVE 237 Query: 242 ETVVHSKEG 250 E S EG Sbjct: 238 EAPAESAEG 246 >gi|308068686|ref|YP_003870291.1| 30S ribosomal protein S2 [Paenibacillus polymyxa E681] gi|310641581|ref|YP_003946339.1| 30S ribosomal protein s2 [Paenibacillus polymyxa SC2] gi|305857965|gb|ADM69753.1| 30S ribosomal protein S2 [Paenibacillus polymyxa E681] gi|309246530|gb|ADO56097.1| 30S ribosomal protein S2 [Paenibacillus polymyxa SC2] Length = 232 Score = 321 bits (822), Expect = 7e-86, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 153/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA D V E A R+ Q+ +N +WLGG +TN++T+ + I +L+ LE Sbjct: 61 AAENGTILFVGTKKQAQDSVKEEAARAGQFYINQRWLGGTLTNFQTIQKRIDRLKQLEAW 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++D+L++ L GI++M GLP +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFAVLPKKEVIILRKEKDRLEKFLGGIKNMKGLPSALFIIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPIV +VDTN +PD +DYVIPGNDD+ R++ L +A A ++ + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVMEANQGEETTA 232 >gi|317493188|ref|ZP_07951611.1| ribosomal protein S2 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918848|gb|EFV40184.1| ribosomal protein S2 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 241 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELQKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD+VIPGNDD+ R+++L+ + VA+ +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAVAATVREGRSQDLATQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|239626518|ref|ZP_04669549.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516664|gb|EEQ56530.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 253 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 100/237 (42%), Positives = 150/237 (63%), Gaps = 1/237 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDI 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + A+R Y VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 66 AAEGGTILFVGTKKQAQEAIKAEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKQIETM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ DKL+R L GI+DM LPD +FVVD +E + +QEA L Sbjct: 126 SEDGTFDVLPKKEVIELRKEWDKLERNLGGIKDMKKLPDAIFVVDPKKEHICVQEAHTLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I+ + + + Sbjct: 186 IPLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQGEVLEGAMEIE 242 >gi|23099041|ref|NP_692507.1| 30S ribosomal protein S2 [Oceanobacillus iheyensis HTE831] gi|38258375|sp|Q8EQV3|RS2_OCEIH RecName: Full=30S ribosomal protein S2 gi|22777269|dbj|BAC13542.1| 30S ribosomal protein S2 [Oceanobacillus iheyensis HTE831] Length = 254 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 97/223 (43%), Positives = 152/223 (68%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MAAISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNYVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG ILFV TK QA D V + A RS Y VN +WLGG +TN++T+ + I +L+ +E++ Sbjct: 61 ASNGGTILFVGTKKQAQDSVRDEAIRSGMYFVNQRWLGGTLTNFQTIRKRINRLKSIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE +N+ +++++L + L GI++M LPD +FV+D +E++AI EA +L Sbjct: 121 EEDGTFEVLPKKEVVNLLKEKERLVKFLGGIKEMNKLPDALFVIDPRKERIAIAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAILE 223 >gi|328954580|ref|YP_004371914.1| ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109] gi|328454904|gb|AEB10733.1| ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109] Length = 281 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 106/236 (44%), Positives = 166/236 (70%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + A +++ Sbjct: 1 MSSVTMKELLEAGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVQLFKVAFDFVTER 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG++LFV TK QA D + E A R + VN +WLGGM+TN++T+ +SI +L++ E++ Sbjct: 61 VASGGKMLFVGTKKQAQDAIFEEANRCGMFFVNHRWLGGMLTNFQTIKKSIDRLKNFEQM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE L +E+K KL ++L GI++M GLPD +FVVD ++E +A+QEAR+++ Sbjct: 121 KEDGSIKRFPKKEILTMEKKAAKLDKSLGGIKNMNGLPDAVFVVDPHKENIAVQEARKMQ 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+VA+VD+N +P +DYVIPGNDD+ R+I L +A+A ++G + + A++ Sbjct: 181 IPVVAIVDSNCDPTEIDYVIPGNDDAIRAIRLITSRIANACLEGQKLRAERLQAES 236 >gi|269958681|ref|YP_003328468.1| 30S ribosomal protein S2 [Anaplasma centrale str. Israel] gi|269848510|gb|ACZ49154.1| 30S ribosomal protein S2 [Anaplasma centrale str. Israel] Length = 340 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 131/283 (46%), Positives = 186/283 (65%), Gaps = 10/283 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+F+IR L+E+GV GH+ WNP M YI+ + + H+IDL +T+ +L+ AL V+ Sbjct: 25 LPEFSIRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLY 84 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V + GR+LFV TK QAS+ + E A R QY VN +WLGGM+TNW+TVS SI++L + E Sbjct: 85 DVVLKRGRVLFVGTKVQASNMIAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFE 144 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +L++ FTKKE L ++++R KL+R+L GIR+MGGLP +FV+DTN+E +AI+EA +L Sbjct: 145 KLISNNEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKL 204 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT--- 237 RIP+VAV+DTNS+P VDY IPGNDDS RSI FC V+ ++ I + G + Sbjct: 205 RIPVVAVLDTNSDPSGVDYPIPGNDDSVRSIDFFCRAVSKTILEAIRSDLAGSGVNVAAA 264 Query: 238 --KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 +AGE V G D S++ + G+ +VP+ S Sbjct: 265 RAAAAGEGDVAEPNGGAAAADRPSADEMLGAGE---IVPDTDS 304 >gi|327475255|gb|AEA77222.1| SSU ribosomal protein S2p [Bacillus sp. 15.4] Length = 236 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 94/236 (39%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V E A+R+ Y +N +WLGG +TN++T+ + I +L+ +E++ Sbjct: 61 AGNGGKVLFVGTKKQAQESVKEEAERAGMYFINQRWLGGTLTNFETIQKRISRLKQIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L + L GI+DM LPD +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMQELPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ + + + A Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAKQGEEAAVTAAE 236 >gi|320096222|ref|ZP_08027808.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 178 str. F0338] gi|319976848|gb|EFW08605.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 178 str. F0338] Length = 276 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 123/256 (48%), Positives = 170/256 (66%), Gaps = 4/256 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILFV TK QA + V E A+R VN +WLGGM+TN+ TVS+ +Q+L++LE+ Sbjct: 61 VAHGGTILFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVSRRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+L Sbjct: 121 DFEDVAASGHTKKELLMMSREKDKLARTLGGIRDMAKVPSAVWIVDPKKEHLAVSEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IPIVA++DTN++PD VDY IPGNDD+ R++AL +VA A +G IAR + G ++ Sbjct: 181 NIPIVAILDTNADPDEVDYRIPGNDDAIRAVALLTRVVADAVAEGLIARSDARKGKGEET 240 Query: 240 AGETVVH-SKEGMQLE 254 A E + +E ++ E Sbjct: 241 AAEPLAEWERELLEGE 256 >gi|292489228|ref|YP_003532115.1| 30S ribosomal protein S2 [Erwinia amylovora CFBP1430] gi|292898539|ref|YP_003537908.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC 49946] gi|291198387|emb|CBJ45494.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC 49946] gi|291554662|emb|CBA22357.1| 30S ribosomal protein S2 [Erwinia amylovora CFBP1430] gi|312173389|emb|CBX81643.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC BAA-2158] Length = 241 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G ++ + +T + Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVAATVREGRSQDLAQQAEETFAEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|313893378|ref|ZP_07826950.1| ribosomal protein S2 [Veillonella sp. oral taxon 158 str. F0412] gi|313442019|gb|EFR60439.1| ribosomal protein S2 [Veillonella sp. oral taxon 158 str. F0412] Length = 239 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 99/238 (41%), Positives = 154/238 (64%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYSFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + Sbjct: 61 ASQGEVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L Sbjct: 121 AEDGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA VDTN +PD VD+ IP NDD+ R++ L +A A ++G + G + Sbjct: 181 IPVVATVDTNCDPDEVDFPIPANDDAIRAVKLLAGKMADAVLEGRQGESFEEGNAEAA 238 >gi|152976193|ref|YP_001375710.1| 30S ribosomal protein S2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189044926|sp|A7GRF7|RS2_BACCN RecName: Full=30S ribosomal protein S2 gi|152024945|gb|ABS22715.1| ribosomal protein S2 [Bacillus cytotoxicus NVH 391-98] Length = 233 Score = 321 bits (822), Expect = 8e-86, Method: Composition-based stats. Identities = 99/229 (43%), Positives = 156/229 (68%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A V+ + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFNVMRNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + Sbjct: 61 AAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L Sbjct: 121 QEDGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 229 >gi|302392363|ref|YP_003828183.1| 30S ribosomal protein S2P [Acetohalobium arabaticum DSM 5501] gi|302204440|gb|ADL13118.1| SSU ribosomal protein S2P [Acetohalobium arabaticum DSM 5501] Length = 266 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 110/266 (41%), Positives = 168/266 (63%), Gaps = 1/266 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++++LESGV FGH+ WNPKME YIF ERN +IIDL QT + ++A + D Sbjct: 1 MSVVTMKEMLESGVHFGHKTRRWNPKMESYIFTERNGIYIIDLQQTEKLAEEAYNFVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +ILF +TK QA + + A R V +WLGGM+TN++T+S+ I +L +LE++ Sbjct: 61 ASEGKQILFASTKKQAQETIEREATRCGMPYVKERWLGGMLTNYQTISKRIDRLEELEQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R+RDKL R L GIRDM GLPD +F+ D RE++A+ EA +L Sbjct: 121 EEDGLFEVLPKKEVMELKRERDKLVRFLGGIRDMDGLPDAIFIADPRREEIAVAEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PDL+DYVIPGNDD+ R++ L ++A A ++G + ++ Sbjct: 181 IPIVAIVDTNCDPDLIDYVIPGNDDAIRAVKLLTGIMADAVLEGKQGKQEQEAEVQEAQV 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG 267 E ++ +++ED+ E + Sbjct: 241 EAEDVAEVEEEVQEDTAEVEETKEAE 266 >gi|146281911|ref|YP_001172064.1| 30S ribosomal protein S2 [Pseudomonas stutzeri A1501] gi|166226743|sp|A4VJS1|RS2_PSEU5 RecName: Full=30S ribosomal protein S2 gi|145570116|gb|ABP79222.1| 30S ribosomal protein S2 [Pseudomonas stutzeri A1501] gi|327480154|gb|AEA83464.1| 30S ribosomal protein S2 [Pseudomonas stutzeri DSM 4166] Length = 246 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 115/249 (46%), Positives = 163/249 (65%), Gaps = 4/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R +L++GV FGH+ WNPKM++YIF RN HII+L +T+PM AL+ + Sbjct: 1 MSQVTMRDMLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LR+LE Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL+R+L GI+DMGGLPD MFV+D + E++AI EA +L Sbjct: 121 SQDGTFEKLTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ VDY+IPGNDD+ R++ L+ +A A + G RQ+ GAD + Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRG--RQNGAGGAD-EFVE 237 Query: 242 ETVVHSKEG 250 E + +G Sbjct: 238 EVASEAAQG 246 >gi|227833386|ref|YP_002835093.1| 30S ribosomal protein S2 [Corynebacterium aurimucosum ATCC 700975] gi|227454402|gb|ACP33155.1| 30S ribosomal protein S2 [Corynebacterium aurimucosum ATCC 700975] Length = 305 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 112/275 (40%), Positives = 171/275 (62%), Gaps = 2/275 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 31 MAVVTMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKET 90 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 91 VAHGGTILFVGTKKQAQEAVAEEASRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 150 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G TKKE L + R+R KL+R L GI DM P +++VDTN+E +A++EA++L Sbjct: 151 DAAEDGYKGRTKKEVLMLTRERTKLERVLGGISDMTKAPSALWIVDTNKEHIAVKEAQKL 210 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ R+ L ++A+A +G + A K A Sbjct: 211 NIPVVAILDTNCDPDEVDFPIPGNDDAIRATKLLSGIIATAVDEGKKAREERQLAQAKEA 270 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E + S +S ++ E Sbjct: 271 AGDTAEKDARDAAEAAAASDPASAEKSEDAEKSAE 305 >gi|331701335|ref|YP_004398294.1| 30S ribosomal protein S2 [Lactobacillus buchneri NRRL B-30929] gi|329128678|gb|AEB73231.1| ribosomal protein S2 [Lactobacillus buchneri NRRL B-30929] Length = 266 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 109/270 (40%), Positives = 166/270 (61%), Gaps = 11/270 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV ++ A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVKLIDVAYNFMKDE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G +LFV TK QA D + E A R+ QY VN++WLGG +TNW+T+ +++L+DL+++ Sbjct: 61 AAKGAVVLFVGTKKQAQDSIAEEATRAGQYYVNNRWLGGTLTNWETIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ KL+R L GI DM +PD+MF+VD +E++A+ EA +L Sbjct: 121 STDGTFDILPKKEVSLLIKQEQKLERFLGGIEDMPKIPDVMFIVDPRKEQIAVHEAMKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D VIP NDD+ R++ L +A A I+G + Sbjct: 181 IPIVAMVDTNTDPDQIDVVIPSNDDAIRAVRLITSKMADAIIEGRQGEDD--------VN 232 Query: 242 ETVVHSKEGMQLE--EDSQSSESSVLDGQE 269 E K+G + + EDS + ++G Sbjct: 233 EKTFEGKDGAKADKKEDSIEDIADAVEGSN 262 >gi|293394701|ref|ZP_06638993.1| 30S ribosomal protein S2 [Serratia odorifera DSM 4582] gi|291422827|gb|EFE96064.1| 30S ribosomal protein S2 [Serratia odorifera DSM 4582] Length = 241 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLTAVAAAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|269926625|ref|YP_003323248.1| ribosomal protein S2 [Thermobaculum terrenum ATCC BAA-798] gi|269790285|gb|ACZ42426.1| ribosomal protein S2 [Thermobaculum terrenum ATCC BAA-798] Length = 289 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 113/274 (41%), Positives = 169/274 (61%), Gaps = 3/274 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++ LLE+GV FGH+ WNPKM+ YIF ERN HIIDL+QTV L +A ++ Sbjct: 1 MA-NVINMKALLEAGVHFGHQAKRWNPKMKPYIFTERNGIHIIDLAQTVRALNEAYDFVA 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GG +LFV TK QA D + E A R+ Q+ VN +W+GGM+TN+ T+ ++ + +LE Sbjct: 60 DTVANGGTVLFVGTKKQAQDAIAEEATRAGQFYVNQRWMGGMLTNFVTIKSRLRTMEELE 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L + KKE L +ER+ ++L + L G+R M LP +++VVD +E +A+ EA R Sbjct: 120 RRKLEGDFDRLPKKEALKLERELERLNKMLGGLRGMDSLPSIVYVVDPRKEYIAVSEANR 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN +PD++D+VIP NDD+ R++ L +A AA++G R+ S + + Sbjct: 180 LGIPVVAMVDTNCDPDVIDWVIPANDDAIRAVRLITSKIADAALEGRMRRESLAAEEGEE 239 Query: 240 AGETVVHSKEGMQ-LEEDSQSSESSVLDGQEVAV 272 E +Q + E +S+ ++ E Sbjct: 240 VFVEGPEVIEELQTVFEPEESAPTAAQGSSEANA 273 >gi|15799851|ref|NP_285863.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 EDL933] gi|15829425|ref|NP_308198.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. Sakai] gi|16128162|ref|NP_414711.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. MG1655] gi|82775559|ref|YP_401906.1| 30S ribosomal protein S2 [Shigella dysenteriae Sd197] gi|89107049|ref|AP_000829.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. W3110] gi|110640388|ref|YP_668116.1| 30S ribosomal protein S2 [Escherichia coli 536] gi|117622454|ref|YP_851367.1| 30S ribosomal protein S2 [Escherichia coli APEC O1] gi|161486319|ref|NP_752154.2| 30S ribosomal protein S2 [Escherichia coli CFT073] gi|162138497|ref|YP_539224.2| 30S ribosomal protein S2 [Escherichia coli UTI89] gi|168751388|ref|ZP_02776410.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4113] gi|168755782|ref|ZP_02780789.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4401] gi|168764324|ref|ZP_02789331.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4501] gi|168770358|ref|ZP_02795365.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4486] gi|168777006|ref|ZP_02802013.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4196] gi|168782061|ref|ZP_02807068.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4076] gi|168789278|ref|ZP_02814285.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC869] gi|168802324|ref|ZP_02827331.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC508] gi|170021478|ref|YP_001726432.1| 30S ribosomal protein S2 [Escherichia coli ATCC 8739] gi|170079805|ref|YP_001729125.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. DH10B] gi|170679652|ref|YP_001742296.1| 30S ribosomal protein S2 [Escherichia coli SMS-3-5] gi|188492026|ref|ZP_02999296.1| ribosomal protein S2 [Escherichia coli 53638] gi|191172818|ref|ZP_03034355.1| ribosomal protein S2 [Escherichia coli F11] gi|194433453|ref|ZP_03065732.1| ribosomal protein S2 [Shigella dysenteriae 1012] gi|194439117|ref|ZP_03071199.1| ribosomal protein S2 [Escherichia coli 101-1] gi|195938149|ref|ZP_03083531.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. EC4024] gi|208806144|ref|ZP_03248481.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4206] gi|208812459|ref|ZP_03253788.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4045] gi|208818702|ref|ZP_03259022.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4042] gi|209399355|ref|YP_002268776.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4115] gi|215485330|ref|YP_002327761.1| 30S ribosomal protein S2 [Escherichia coli O127:H6 str. E2348/69] gi|217324474|ref|ZP_03440558.1| ribosomal protein S2 [Escherichia coli O157:H7 str. TW14588] gi|218547624|ref|YP_002381415.1| 30S ribosomal protein S2 [Escherichia fergusonii ATCC 35469] gi|218557110|ref|YP_002390023.1| 30S ribosomal protein S2 [Escherichia coli S88] gi|218688044|ref|YP_002396256.1| 30S ribosomal protein S2 [Escherichia coli ED1a] gi|218698588|ref|YP_002406217.1| 30S ribosomal protein S2 [Escherichia coli IAI39] gi|218703423|ref|YP_002410942.1| 30S ribosomal protein S2 [Escherichia coli UMN026] gi|227884918|ref|ZP_04002723.1| ribosomal protein S2 [Escherichia coli 83972] gi|237704328|ref|ZP_04534809.1| 30S ribosomal protein S2 [Escherichia sp. 3_2_53FAA] gi|238899567|ref|YP_002925363.1| 30S ribosomal subunit protein S2 [Escherichia coli BW2952] gi|253774804|ref|YP_003037635.1| 30S ribosomal protein S2 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037588|ref|ZP_04871665.1| 30S ribosomal protein S2 [Escherichia sp. 1_1_43] gi|254160288|ref|YP_003043396.1| 30S ribosomal protein S2 [Escherichia coli B str. REL606] gi|254791302|ref|YP_003076139.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. TW14359] gi|256025481|ref|ZP_05439346.1| 30S ribosomal protein S2 [Escherichia sp. 4_1_40B] gi|261226923|ref|ZP_05941204.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. FRIK2000] gi|261255327|ref|ZP_05947860.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. FRIK966] gi|291280991|ref|YP_003497809.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. CB9615] gi|293403238|ref|ZP_06647335.1| rpsB [Escherichia coli FVEC1412] gi|293408261|ref|ZP_06652101.1| 30S ribosomal protein S2 [Escherichia coli B354] gi|293418055|ref|ZP_06660677.1| 30S ribosomal protein S2 [Escherichia coli B185] gi|297519876|ref|ZP_06938262.1| 30S ribosomal protein S2 [Escherichia coli OP50] gi|298378773|ref|ZP_06988657.1| 30S ribosomal protein S2 [Escherichia coli FVEC1302] gi|300900794|ref|ZP_07118937.1| ribosomal protein S2 [Escherichia coli MS 198-1] gi|300919733|ref|ZP_07136218.1| ribosomal protein S2 [Escherichia coli MS 115-1] gi|300932123|ref|ZP_07147408.1| ribosomal protein S2 [Escherichia coli MS 187-1] gi|300938576|ref|ZP_07153309.1| ribosomal protein S2 [Escherichia coli MS 21-1] gi|300949800|ref|ZP_07163773.1| ribosomal protein S2 [Escherichia coli MS 116-1] gi|300956052|ref|ZP_07168377.1| ribosomal protein S2 [Escherichia coli MS 175-1] gi|300984929|ref|ZP_07177194.1| ribosomal protein S2 [Escherichia coli MS 200-1] gi|300993610|ref|ZP_07180466.1| ribosomal protein S2 [Escherichia coli MS 45-1] gi|301025951|ref|ZP_07189435.1| ribosomal protein S2 [Escherichia coli MS 69-1] gi|301028660|ref|ZP_07191883.1| ribosomal protein S2 [Escherichia coli MS 196-1] gi|301049920|ref|ZP_07196843.1| ribosomal protein S2 [Escherichia coli MS 185-1] gi|301646491|ref|ZP_07246367.1| ribosomal protein S2 [Escherichia coli MS 146-1] gi|306815231|ref|ZP_07449380.1| 30S ribosomal protein S2 [Escherichia coli NC101] gi|307136769|ref|ZP_07496125.1| 30S ribosomal protein S2 [Escherichia coli H736] gi|331645311|ref|ZP_08346422.1| ribosomal protein S2 [Escherichia coli M605] gi|331661240|ref|ZP_08362172.1| ribosomal protein S2 [Escherichia coli TA206] gi|331661543|ref|ZP_08362467.1| ribosomal protein S2 [Escherichia coli TA143] gi|331681554|ref|ZP_08382191.1| ribosomal protein S2 [Escherichia coli H299] gi|62288920|sp|P0A7V0|RS2_ECOLI RecName: Full=30S ribosomal protein S2 gi|62288921|sp|P0A7V1|RS2_ECOL6 RecName: Full=30S ribosomal protein S2 gi|62288922|sp|P0A7V2|RS2_ECO57 RecName: Full=30S ribosomal protein S2 gi|123344367|sp|Q0TLG4|RS2_ECOL5 RecName: Full=30S ribosomal protein S2 gi|123728606|sp|Q32JU0|RS2_SHIDS RecName: Full=30S ribosomal protein S2 gi|166225269|sp|A1A7L3|RS2_ECOK1 RecName: Full=30S ribosomal protein S2 gi|189044938|sp|B1IQH2|RS2_ECOLC RecName: Full=30S ribosomal protein S2 gi|209573715|sp|Q1RG21|RS2_ECOUT RecName: Full=30S ribosomal protein S2 gi|226697639|sp|B7MBF0|RS2_ECO45 RecName: Full=30S ribosomal protein S2 gi|226697640|sp|B7NID0|RS2_ECO7I RecName: Full=30S ribosomal protein S2 gi|226697642|sp|B7N836|RS2_ECOLU RecName: Full=30S ribosomal protein S2 gi|226697643|sp|B1LGX0|RS2_ECOSM RecName: Full=30S ribosomal protein S2 gi|226697644|sp|B7LWA8|RS2_ESCF3 RecName: Full=30S ribosomal protein S2 gi|229470513|sp|B1XD38|RS2_ECODH RecName: Full=30S ribosomal protein S2 gi|238058194|sp|B5Z0E7|RS2_ECO5E RecName: Full=30S ribosomal protein S2 gi|254764475|sp|B7UIL4|RS2_ECO27 RecName: Full=30S ribosomal protein S2 gi|254764477|sp|B7MP29|RS2_ECO81 RecName: Full=30S ribosomal protein S2 gi|259495213|sp|C4ZRR1|RS2_ECOBW RecName: Full=30S ribosomal protein S2 gi|116666568|pdb|1VS5|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666620|pdb|1VS7|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|256032353|pdb|3E1A|B Chain B, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Pre-Accommodation State gi|256032410|pdb|3E1C|B Chain B, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Post-Accommodation State gi|257097323|pdb|3I1M|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097375|pdb|3I1O|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097427|pdb|3I1Q|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097481|pdb|3I1S|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097535|pdb|3I1Z|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097590|pdb|3I21|B Chain B, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560308|pdb|3KC4|B Chain B, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3kcr gi|308198688|pdb|3OR9|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308198709|pdb|3ORA|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|326634280|pdb|3IZV|F Chain F, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Small Subunit Of A Ribosome Programmed With A Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|326634305|pdb|3IZW|F Chain F, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding.This Entry Contains The Small Subunit Of A Ribosome Programmed With A Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|12512894|gb|AAG54471.1|AE005193_1 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. EDL933] gi|42842|emb|CAA23631.1| ribosomal protein S2 [Escherichia coli] gi|1552746|gb|AAB08598.1| ribosomal protein S2 [Escherichia coli] gi|1786365|gb|AAC73280.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. MG1655] gi|13359627|dbj|BAB33594.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. Sakai] gi|21239023|dbj|BAB96744.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K12 substr. W3110] gi|81239707|gb|ABB60417.1| 30S ribosomal subunit protein S2 [Shigella dysenteriae Sd197] gi|110341980|gb|ABG68217.1| 30S ribosomal protein S2 [Escherichia coli 536] gi|115511578|gb|ABI99652.1| 30S ribosomal protein S2 [Escherichia coli APEC O1] gi|169756406|gb|ACA79105.1| ribosomal protein S2 [Escherichia coli ATCC 8739] gi|169887640|gb|ACB01347.1| 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. DH10B] gi|170517370|gb|ACB15548.1| ribosomal protein S2 [Escherichia coli SMS-3-5] gi|187767691|gb|EDU31535.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4196] gi|188014562|gb|EDU52684.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4113] gi|188487225|gb|EDU62328.1| ribosomal protein S2 [Escherichia coli 53638] gi|189000441|gb|EDU69427.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4076] gi|189357006|gb|EDU75425.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4401] gi|189360740|gb|EDU79159.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4486] gi|189365653|gb|EDU84069.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4501] gi|189371061|gb|EDU89477.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC869] gi|189375689|gb|EDU94105.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC508] gi|190906968|gb|EDV66570.1| ribosomal protein S2 [Escherichia coli F11] gi|194418381|gb|EDX34471.1| ribosomal protein S2 [Shigella dysenteriae 1012] gi|194421936|gb|EDX37941.1| ribosomal protein S2 [Escherichia coli 101-1] gi|208725945|gb|EDZ75546.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4206] gi|208733736|gb|EDZ82423.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4045] gi|208738825|gb|EDZ86507.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4042] gi|209160755|gb|ACI38188.1| ribosomal protein S2 [Escherichia coli O157:H7 str. EC4115] gi|209745854|gb|ACI71234.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745856|gb|ACI71235.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745858|gb|ACI71236.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745860|gb|ACI71237.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|209745862|gb|ACI71238.1| 30S ribosomal subunit protein S2 [Escherichia coli] gi|215263402|emb|CAS07722.1| 30S ribosomal subunit protein S2 [Escherichia coli O127:H6 str. E2348/69] gi|217320695|gb|EEC29119.1| ribosomal protein S2 [Escherichia coli O157:H7 str. TW14588] gi|218355165|emb|CAQ87772.1| 30S ribosomal subunit protein S2 [Escherichia fergusonii ATCC 35469] gi|218363879|emb|CAR01544.1| 30S ribosomal subunit protein S2 [Escherichia coli S88] gi|218368574|emb|CAR16311.1| 30S ribosomal subunit protein S2 [Escherichia coli IAI39] gi|218425608|emb|CAR06394.1| 30S ribosomal subunit protein S2 [Escherichia coli ED1a] gi|218430520|emb|CAR11386.1| 30S ribosomal subunit protein S2 [Escherichia coli UMN026] gi|222031999|emb|CAP74738.1| 30S ribosomal protein S2 [Escherichia coli LF82] gi|226840694|gb|EEH72696.1| 30S ribosomal protein S2 [Escherichia sp. 1_1_43] gi|226902240|gb|EEH88499.1| 30S ribosomal protein S2 [Escherichia sp. 3_2_53FAA] gi|227838056|gb|EEJ48522.1| ribosomal protein S2 [Escherichia coli 83972] gi|238859794|gb|ACR61792.1| 30S ribosomal subunit protein S2 [Escherichia coli BW2952] gi|242376001|emb|CAQ30683.1| 30S ribosomal subunit protein S2, subunit of 30S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253325848|gb|ACT30450.1| ribosomal protein S2 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972189|gb|ACT37860.1| 30S ribosomal protein S2 [Escherichia coli B str. REL606] gi|253976398|gb|ACT42068.1| 30S ribosomal protein S2 [Escherichia coli BL21(DE3)] gi|254590702|gb|ACT70063.1| 30S ribosomal subunit protein S2 [Escherichia coli O157:H7 str. TW14359] gi|260450627|gb|ACX41049.1| ribosomal protein S2 [Escherichia coli DH1] gi|281177394|dbj|BAI53724.1| 30S ribosomal protein S2 [Escherichia coli SE15] gi|284919944|emb|CBG32999.1| 30S ribosomal protein S2 [Escherichia coli 042] gi|290760864|gb|ADD54825.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. CB9615] gi|291430153|gb|EFF03167.1| rpsB [Escherichia coli FVEC1412] gi|291430773|gb|EFF03771.1| 30S ribosomal protein S2 [Escherichia coli B185] gi|291472512|gb|EFF14994.1| 30S ribosomal protein S2 [Escherichia coli B354] gi|294491579|gb|ADE90335.1| ribosomal protein S2 [Escherichia coli IHE3034] gi|298281107|gb|EFI22608.1| 30S ribosomal protein S2 [Escherichia coli FVEC1302] gi|299878329|gb|EFI86540.1| ribosomal protein S2 [Escherichia coli MS 196-1] gi|300298322|gb|EFJ54707.1| ribosomal protein S2 [Escherichia coli MS 185-1] gi|300306579|gb|EFJ61099.1| ribosomal protein S2 [Escherichia coli MS 200-1] gi|300317082|gb|EFJ66866.1| ribosomal protein S2 [Escherichia coli MS 175-1] gi|300355712|gb|EFJ71582.1| ribosomal protein S2 [Escherichia coli MS 198-1] gi|300395750|gb|EFJ79288.1| ribosomal protein S2 [Escherichia coli MS 69-1] gi|300406533|gb|EFJ90071.1| ribosomal protein S2 [Escherichia coli MS 45-1] gi|300413211|gb|EFJ96521.1| ribosomal protein S2 [Escherichia coli MS 115-1] gi|300450798|gb|EFK14418.1| ribosomal protein S2 [Escherichia coli MS 116-1] gi|300456458|gb|EFK19951.1| ribosomal protein S2 [Escherichia coli MS 21-1] gi|300460099|gb|EFK23592.1| ribosomal protein S2 [Escherichia coli MS 187-1] gi|301075295|gb|EFK90101.1| ribosomal protein S2 [Escherichia coli MS 146-1] gi|305850893|gb|EFM51348.1| 30S ribosomal protein S2 [Escherichia coli NC101] gi|307552019|gb|ADN44794.1| hypothetical protein ECABU_c01810 [Escherichia coli ABU 83972] gi|307629745|gb|ADN74049.1| 30S ribosomal protein S2 [Escherichia coli UM146] gi|309700377|emb|CBI99665.1| 30S ribosomal protein S2 [Escherichia coli ETEC H10407] gi|312944777|gb|ADR25604.1| 30S ribosomal protein S2 [Escherichia coli O83:H1 str. NRG 857C] gi|315134859|dbj|BAJ42018.1| 30S ribosomal protein S2 [Escherichia coli DH1] gi|315285264|gb|EFU44709.1| ribosomal protein S2 [Escherichia coli MS 110-3] gi|315294573|gb|EFU53920.1| ribosomal protein S2 [Escherichia coli MS 153-1] gi|315300690|gb|EFU59917.1| ribosomal protein S2 [Escherichia coli MS 16-3] gi|320179910|gb|EFW54854.1| SSU ribosomal protein S2p (SAe) [Shigella boydii ATCC 9905] gi|320190306|gb|EFW64956.1| SSU ribosomal protein S2p (SAe) [Escherichia coli O157:H7 str. EC1212] gi|320196955|gb|EFW71576.1| SSU ribosomal protein S2p (SAe) [Escherichia coli WV_060327] gi|320639975|gb|EFX09560.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. G5101] gi|320644745|gb|EFX13789.1| 30S ribosomal protein S2 [Escherichia coli O157:H- str. 493-89] gi|320652901|gb|EFX21139.1| 30S ribosomal protein S2 [Escherichia coli O157:H- str. H 2687] gi|320658289|gb|EFX26018.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663599|gb|EFX30883.1| 30S ribosomal protein S2 [Escherichia coli O55:H7 str. USDA 5905] gi|320668912|gb|EFX35707.1| 30S ribosomal protein S2 [Escherichia coli O157:H7 str. LSU-61] gi|323935008|gb|EGB31381.1| ribosomal protein S2 [Escherichia coli E1520] gi|323939956|gb|EGB36154.1| ribosomal protein S2 [Escherichia coli E482] gi|323950832|gb|EGB46709.1| ribosomal protein S2 [Escherichia coli H252] gi|323955130|gb|EGB50905.1| ribosomal protein S2 [Escherichia coli H263] gi|323959929|gb|EGB55576.1| ribosomal protein S2 [Escherichia coli H489] gi|323964939|gb|EGB60405.1| ribosomal protein S2 [Escherichia coli M863] gi|323970648|gb|EGB65904.1| ribosomal protein S2 [Escherichia coli TA007] gi|323975664|gb|EGB70760.1| ribosomal protein S2 [Escherichia coli TW10509] gi|324008248|gb|EGB77467.1| ribosomal protein S2 [Escherichia coli MS 57-2] gi|324112420|gb|EGC06397.1| ribosomal protein S2 [Escherichia fergusonii B253] gi|325496101|gb|EGC93960.1| 30S ribosomal protein S2 [Escherichia fergusonii ECD227] gi|326339777|gb|EGD63585.1| SSU ribosomal protein S2p (SAe) [Escherichia coli O157:H7 str. 1044] gi|326345112|gb|EGD68855.1| SSU ribosomal protein S2p (SAe) [Escherichia coli O157:H7 str. 1125] gi|330910019|gb|EGH38529.1| SSU ribosomal protein S2p, SAe [Escherichia coli AA86] gi|331046068|gb|EGI18187.1| ribosomal protein S2 [Escherichia coli M605] gi|331052282|gb|EGI24321.1| ribosomal protein S2 [Escherichia coli TA206] gi|331061458|gb|EGI33421.1| ribosomal protein S2 [Escherichia coli TA143] gi|331081775|gb|EGI52936.1| ribosomal protein S2 [Escherichia coli H299] gi|332341501|gb|AEE54835.1| 30S ribosomal protein S2 RpsB [Escherichia coli UMNK88] Length = 241 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|255280807|ref|ZP_05345362.1| ribosomal protein S2 [Bryantella formatexigens DSM 14469] gi|255268744|gb|EET61949.1| ribosomal protein S2 [Bryantella formatexigens DSM 14469] Length = 325 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 101/238 (42%), Positives = 151/238 (63%), Gaps = 4/238 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + D Sbjct: 75 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYNAVGDI 134 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D V A+R + VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 135 VANGGTILFVGTKKQAQDAVKSEAERCGMFYVNERWLGGMLTNFKTIRSRIDRLKQIETM 194 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++++KL + L GI++M +PD +FVVD +E++ +QEA L Sbjct: 195 EADGTFDVLPKKEVIALRKEKEKLNKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHTLG 254 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQHSYMGAD 236 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ G R + G D Sbjct: 255 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQGAERDVVFEGED 312 >gi|172057860|ref|YP_001814320.1| 30S ribosomal protein S2 [Exiguobacterium sibiricum 255-15] gi|229470515|sp|B1YI76|RS2_EXIS2 RecName: Full=30S ribosomal protein S2 gi|171990381|gb|ACB61303.1| ribosomal protein S2 [Exiguobacterium sibiricum 255-15] Length = 244 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 156/239 (65%), Gaps = 1/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A I + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYNFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG +LFV TK QA D V E A R+ QY +N +WLGG +TN+ T+ + I +L+ LE++ Sbjct: 61 ASEGGNVLFVGTKKQAQDTVKEEAIRAGQYFINERWLGGTLTNFSTIKKRINRLKQLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE + ++++ +L++ L GI+DM G+PD +F+VD +E++AI EA +L Sbjct: 121 EENGTFEVLPKKEVIILKKEMTRLEKFLGGIKDMPGVPDALFIVDPRKERIAIAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVA+VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + T+ Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEVKQGEDNVAPETTEEV 239 >gi|282898568|ref|ZP_06306556.1| Ribosomal protein S2 [Cylindrospermopsis raciborskii CS-505] gi|281196436|gb|EFA71345.1| Ribosomal protein S2 [Cylindrospermopsis raciborskii CS-505] Length = 263 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++ESGV FGH+ WNPKM YI+ RN HIIDL QT ++ A + Sbjct: 1 MPVVSLAQMMESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAQLMDDAYNYMRSQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA+ + + A R + +N +WLGGM+TNW T+ +L+DLE Sbjct: 61 AEQGKKFLFVGTKRQAAGIIAQEANRCGSHYINQRWLGGMLTNWATIKTRADRLKDLERR 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI++M +PD++ +VD RE A+QE ++L Sbjct: 121 EENGALDLLPKKEASMLRREMSKLQKYLGGIKNMRKVPDVVIIVDQRREYNAVQECQKLS 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPIV+++DTN +PD VD IP NDD+ RSI L +A A +G Q Sbjct: 181 IPIVSMLDTNCDPDTVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQ 228 >gi|15598852|ref|NP_252346.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO1] gi|116051653|ref|YP_789508.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa UCBPP-PA14] gi|218890119|ref|YP_002438983.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa LESB58] gi|296387837|ref|ZP_06877312.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAb1] gi|313109061|ref|ZP_07795033.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 39016] gi|12230937|sp|O82850|RS2_PSEAE RecName: Full=30S ribosomal protein S2 gi|122260796|sp|Q02RC8|RS2_PSEAB RecName: Full=30S ribosomal protein S2 gi|226697646|sp|B7V7F7|RS2_PSEA8 RecName: Full=30S ribosomal protein S2 gi|9949817|gb|AAG07044.1|AE004785_8 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO1] gi|115586874|gb|ABJ12889.1| 30S ribosomal subunit protein S2 [Pseudomonas aeruginosa UCBPP-PA14] gi|218770342|emb|CAW26107.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa LESB58] gi|310881535|gb|EFQ40129.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 39016] Length = 246 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 116/249 (46%), Positives = 161/249 (64%), Gaps = 4/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD + Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD-EFVE 237 Query: 242 ETVVHSKEG 250 E S EG Sbjct: 238 EAPAESAEG 246 >gi|314936583|ref|ZP_07843930.1| ribosomal protein S2 [Staphylococcus hominis subsp. hominis C80] gi|313655202|gb|EFS18947.1| ribosomal protein S2 [Staphylococcus hominis subsp. hominis C80] Length = 262 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 103/267 (38%), Positives = 171/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R++Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQESVKAEAERASQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFDVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQ-----GISNDEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + E + ++ + E++ ++ Sbjct: 236 EQNIDLDESEETQKAESTEENTTVESN 262 >gi|237729475|ref|ZP_04559956.1| 30S ribosomal subunit protein S2 [Citrobacter sp. 30_2] gi|283835231|ref|ZP_06354972.1| ribosomal protein S2 [Citrobacter youngae ATCC 29220] gi|226909204|gb|EEH95122.1| 30S ribosomal subunit protein S2 [Citrobacter sp. 30_2] gi|291068942|gb|EFE07051.1| ribosomal protein S2 [Citrobacter youngae ATCC 29220] Length = 241 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVATTVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|30021915|ref|NP_833546.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 14579] gi|206972651|ref|ZP_03233592.1| 30S ribosomal protein S2 [Bacillus cereus AH1134] gi|218235460|ref|YP_002368628.1| 30S ribosomal protein S2 [Bacillus cereus B4264] gi|218898980|ref|YP_002447391.1| ribosomal protein S2 [Bacillus cereus G9842] gi|228902330|ref|ZP_04066487.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 4222] gi|228909651|ref|ZP_04073474.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 200] gi|228922581|ref|ZP_04085881.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228966772|ref|ZP_04127816.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228980433|ref|ZP_04140743.1| 30S ribosomal protein S2 [Bacillus thuringiensis Bt407] gi|229019022|ref|ZP_04175863.1| 30S ribosomal protein S2 [Bacillus cereus AH1273] gi|229047513|ref|ZP_04193103.1| 30S ribosomal protein S2 [Bacillus cereus AH676] gi|229071325|ref|ZP_04204548.1| 30S ribosomal protein S2 [Bacillus cereus F65185] gi|229081082|ref|ZP_04213592.1| 30S ribosomal protein S2 [Bacillus cereus Rock4-2] gi|229098296|ref|ZP_04229243.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-29] gi|229111298|ref|ZP_04240851.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-15] gi|229129103|ref|ZP_04258076.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-Cer4] gi|229146398|ref|ZP_04274769.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST24] gi|229152026|ref|ZP_04280221.1| 30S ribosomal protein S2 [Bacillus cereus m1550] gi|229180103|ref|ZP_04307447.1| 30S ribosomal protein S2 [Bacillus cereus 172560W] gi|229191996|ref|ZP_04318966.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 10876] gi|296504322|ref|YP_003666022.1| 30S ribosomal protein S2 [Bacillus thuringiensis BMB171] gi|38258298|sp|Q819X9|RS2_BACCR RecName: Full=30S ribosomal protein S2 gi|226695072|sp|B7IUI6|RS2_BACC2 RecName: Full=30S ribosomal protein S2 gi|226732173|sp|B7HDV0|RS2_BACC4 RecName: Full=30S ribosomal protein S2 gi|29897471|gb|AAP10747.1| SSU ribosomal protein S2P [Bacillus cereus ATCC 14579] gi|206732408|gb|EDZ49589.1| 30S ribosomal protein S2 [Bacillus cereus AH1134] gi|218163417|gb|ACK63409.1| ribosomal protein S2 [Bacillus cereus B4264] gi|218540934|gb|ACK93328.1| ribosomal protein S2 [Bacillus cereus G9842] gi|228591547|gb|EEK49396.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 10876] gi|228603312|gb|EEK60789.1| 30S ribosomal protein S2 [Bacillus cereus 172560W] gi|228631375|gb|EEK88009.1| 30S ribosomal protein S2 [Bacillus cereus m1550] gi|228637031|gb|EEK93490.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST24] gi|228654340|gb|EEL10205.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-Cer4] gi|228672074|gb|EEL27365.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-15] gi|228685194|gb|EEL39125.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-29] gi|228702126|gb|EEL54602.1| 30S ribosomal protein S2 [Bacillus cereus Rock4-2] gi|228711779|gb|EEL63731.1| 30S ribosomal protein S2 [Bacillus cereus F65185] gi|228723760|gb|EEL75115.1| 30S ribosomal protein S2 [Bacillus cereus AH676] gi|228742262|gb|EEL92421.1| 30S ribosomal protein S2 [Bacillus cereus AH1273] gi|228779253|gb|EEM27510.1| 30S ribosomal protein S2 [Bacillus thuringiensis Bt407] gi|228792871|gb|EEM40429.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228837010|gb|EEM82351.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849940|gb|EEM94771.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 200] gi|228857299|gb|EEN01802.1| 30S ribosomal protein S2 [Bacillus thuringiensis IBL 4222] gi|296325374|gb|ADH08302.1| 30S ribosomal protein S2 [Bacillus thuringiensis BMB171] gi|326941595|gb|AEA17491.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar chinensis CT-43] Length = 233 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 99/229 (43%), Positives = 157/229 (68%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + Sbjct: 61 AAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L Sbjct: 121 QEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 229 >gi|74310789|ref|YP_309208.1| 30S ribosomal protein S2 [Shigella sonnei Ss046] gi|82542768|ref|YP_406715.1| 30S ribosomal protein S2 [Shigella boydii Sb227] gi|157159281|ref|YP_001461338.1| 30S ribosomal protein S2 [Escherichia coli E24377A] gi|157159634|ref|YP_001456952.1| 30S ribosomal protein S2 [Escherichia coli HS] gi|187733810|ref|YP_001878970.1| 30S ribosomal protein S2 [Shigella boydii CDC 3083-94] gi|191166332|ref|ZP_03028164.1| ribosomal protein S2 [Escherichia coli B7A] gi|193063302|ref|ZP_03044393.1| ribosomal protein S2 [Escherichia coli E22] gi|193067626|ref|ZP_03048593.1| ribosomal protein S2 [Escherichia coli E110019] gi|194428264|ref|ZP_03060806.1| ribosomal protein S2 [Escherichia coli B171] gi|209917359|ref|YP_002291443.1| 30S ribosomal protein S2 [Escherichia coli SE11] gi|218552749|ref|YP_002385662.1| 30S ribosomal protein S2 [Escherichia coli IAI1] gi|218693634|ref|YP_002401301.1| 30S ribosomal protein S2 [Escherichia coli 55989] gi|256021601|ref|ZP_05435466.1| 30S ribosomal protein S2 [Shigella sp. D9] gi|260842401|ref|YP_003220179.1| 30S ribosomal subunit protein S2 [Escherichia coli O103:H2 str. 12009] gi|260853379|ref|YP_003227270.1| 30S ribosomal subunit protein S2 [Escherichia coli O26:H11 str. 11368] gi|260866318|ref|YP_003232720.1| 30S ribosomal subunit protein S2 [Escherichia coli O111:H- str. 11128] gi|293476826|ref|ZP_06665234.1| 30S ribosomal protein S2 [Escherichia coli B088] gi|300816209|ref|ZP_07096432.1| ribosomal protein S2 [Escherichia coli MS 107-1] gi|300824108|ref|ZP_07104228.1| ribosomal protein S2 [Escherichia coli MS 119-7] gi|300901988|ref|ZP_07120015.1| ribosomal protein S2 [Escherichia coli MS 84-1] gi|300923039|ref|ZP_07139106.1| ribosomal protein S2 [Escherichia coli MS 182-1] gi|301305305|ref|ZP_07211401.1| ribosomal protein S2 [Escherichia coli MS 124-1] gi|301330033|ref|ZP_07222717.1| ribosomal protein S2 [Escherichia coli MS 78-1] gi|307311384|ref|ZP_07591026.1| ribosomal protein S2 [Escherichia coli W] gi|309796346|ref|ZP_07690755.1| ribosomal protein S2 [Escherichia coli MS 145-7] gi|312970268|ref|ZP_07784450.1| ribosomal protein S2 [Escherichia coli 1827-70] gi|331666410|ref|ZP_08367291.1| ribosomal protein S2 [Escherichia coli TA271] gi|123728440|sp|Q325X1|RS2_SHIBS RecName: Full=30S ribosomal protein S2 gi|123732412|sp|Q3Z5I9|RS2_SHISS RecName: Full=30S ribosomal protein S2 gi|167011233|sp|A7ZHQ9|RS2_ECO24 RecName: Full=30S ribosomal protein S2 gi|167011234|sp|A7ZWB5|RS2_ECOHS RecName: Full=30S ribosomal protein S2 gi|226697641|sp|B7M1A9|RS2_ECO8A RecName: Full=30S ribosomal protein S2 gi|238058195|sp|B6HZE3|RS2_ECOSE RecName: Full=30S ribosomal protein S2 gi|238689499|sp|B2U311|RS2_SHIB3 RecName: Full=30S ribosomal protein S2 gi|254764476|sp|B7LGN0|RS2_ECO55 RecName: Full=30S ribosomal protein S2 gi|73854266|gb|AAZ86973.1| 30S ribosomal subunit protein S2 [Shigella sonnei Ss046] gi|81244179|gb|ABB64887.1| 30S ribosomal subunit protein S2 [Shigella boydii Sb227] gi|157065314|gb|ABV04569.1| ribosomal protein S2 [Escherichia coli HS] gi|157081311|gb|ABV21019.1| ribosomal protein S2 [Escherichia coli E24377A] gi|187430802|gb|ACD10076.1| ribosomal protein S2 [Shigella boydii CDC 3083-94] gi|190903583|gb|EDV63300.1| ribosomal protein S2 [Escherichia coli B7A] gi|192931210|gb|EDV83813.1| ribosomal protein S2 [Escherichia coli E22] gi|192959038|gb|EDV89474.1| ribosomal protein S2 [Escherichia coli E110019] gi|194413639|gb|EDX29919.1| ribosomal protein S2 [Escherichia coli B171] gi|209910618|dbj|BAG75692.1| 30S ribosomal protein S2 [Escherichia coli SE11] gi|218350366|emb|CAU96049.1| 30S ribosomal subunit protein S2 [Escherichia coli 55989] gi|218359517|emb|CAQ97055.1| 30S ribosomal subunit protein S2 [Escherichia coli IAI1] gi|257752028|dbj|BAI23530.1| 30S ribosomal subunit protein S2 [Escherichia coli O26:H11 str. 11368] gi|257757548|dbj|BAI29045.1| 30S ribosomal subunit protein S2 [Escherichia coli O103:H2 str. 12009] gi|257762674|dbj|BAI34169.1| 30S ribosomal subunit protein S2 [Escherichia coli O111:H- str. 11128] gi|291321279|gb|EFE60721.1| 30S ribosomal protein S2 [Escherichia coli B088] gi|300405874|gb|EFJ89412.1| ribosomal protein S2 [Escherichia coli MS 84-1] gi|300420666|gb|EFK03977.1| ribosomal protein S2 [Escherichia coli MS 182-1] gi|300523385|gb|EFK44454.1| ribosomal protein S2 [Escherichia coli MS 119-7] gi|300531416|gb|EFK52478.1| ribosomal protein S2 [Escherichia coli MS 107-1] gi|300839410|gb|EFK67170.1| ribosomal protein S2 [Escherichia coli MS 124-1] gi|300843944|gb|EFK71704.1| ribosomal protein S2 [Escherichia coli MS 78-1] gi|306908363|gb|EFN38861.1| ribosomal protein S2 [Escherichia coli W] gi|308120050|gb|EFO57312.1| ribosomal protein S2 [Escherichia coli MS 145-7] gi|310337766|gb|EFQ02877.1| ribosomal protein S2 [Escherichia coli 1827-70] gi|315059387|gb|ADT73714.1| 30S ribosomal subunit protein S2 [Escherichia coli W] gi|315254971|gb|EFU34939.1| ribosomal protein S2 [Escherichia coli MS 85-1] gi|320173351|gb|EFW48554.1| SSU ribosomal protein S2p (SAe) [Shigella dysenteriae CDC 74-1112] gi|320186589|gb|EFW61314.1| SSU ribosomal protein S2p (SAe) [Shigella flexneri CDC 796-83] gi|320200307|gb|EFW74893.1| SSU ribosomal protein S2p (SAe) [Escherichia coli EC4100B] gi|323157995|gb|EFZ44097.1| ribosomal protein S2 [Escherichia coli EPECa14] gi|323165869|gb|EFZ51651.1| ribosomal protein S2 [Shigella sonnei 53G] gi|323170959|gb|EFZ56608.1| ribosomal protein S2 [Escherichia coli LT-68] gi|323176482|gb|EFZ62074.1| ribosomal protein S2 [Escherichia coli 1180] gi|323181675|gb|EFZ67089.1| ribosomal protein S2 [Escherichia coli 1357] gi|323380054|gb|ADX52322.1| ribosomal protein S2 [Escherichia coli KO11] gi|323945643|gb|EGB41692.1| ribosomal protein S2 [Escherichia coli H120] gi|324017824|gb|EGB87043.1| ribosomal protein S2 [Escherichia coli MS 117-3] gi|324118288|gb|EGC12183.1| ribosomal protein S2 [Escherichia coli E1167] gi|331066621|gb|EGI38498.1| ribosomal protein S2 [Escherichia coli TA271] gi|332098797|gb|EGJ03757.1| ribosomal protein S2 [Shigella boydii 3594-74] Length = 241 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|209524187|ref|ZP_03272737.1| ribosomal protein S2 [Arthrospira maxima CS-328] gi|209495278|gb|EDZ95583.1| ribosomal protein S2 [Arthrospira maxima CS-328] Length = 315 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 135/226 (59%), Gaps = 1/226 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + +P ++ +LESGV FGH+ WNP+M YIF ERN HIIDL QT ++ A + Sbjct: 49 LIMPVISLADMLESGVHFGHQTRRWNPRMAPYIFTERNGVHIIDLVQTAQLMDDAYDYVR 108 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ + +L++LE Sbjct: 109 SASEQGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWVTIKTRVDRLKELE 168 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 N + KKE + R+ KL++ L G++ M +PD + +VD RE A+ E R+ Sbjct: 169 ARENSGQLDYLPKKEAAVLRREMGKLQKYLGGLKGMRRVPDAVIMVDQRREYNAVMECRK 228 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 L IPI+A++DTN +PDL D IP NDD+ R+I L +A +G Sbjct: 229 LGIPIIALLDTNCDPDLADIHIPANDDAIRAIKLIVGKLADGIYEG 274 >gi|84498382|ref|ZP_00997179.1| 30S ribosomal protein S2 [Janibacter sp. HTCC2649] gi|84381882|gb|EAP97765.1| 30S ribosomal protein S2 [Janibacter sp. HTCC2649] Length = 319 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 108/231 (46%), Positives = 156/231 (67%), Gaps = 2/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL Q+V + A + + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFIMTERNGIYIIDLQQSVTYINNAYEFVRET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILFV TK QA + + E A R VN +WLGGM+TN++T+S+ + +L +L+E Sbjct: 61 VAHGGSILFVGTKKQAQEPIAEQATRVGMPYVNHRWLGGMLTNFQTISKRLTRLVELDEI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L ++R+RDKL + L GIR M +P +++VDT +E LA+ EAR+L Sbjct: 121 DFEDVAGSGRTKKELLLLKRERDKLDKTLGGIRGMAKVPSAVWIVDTKKEHLAVDEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +P++A++DTN +PD VDY IPGNDD+ RS+ L ++A A +G+ + Sbjct: 181 GLPVIAILDTNCDPDEVDYKIPGNDDAIRSVTLLTRVIADAVAEGLISRSG 231 >gi|291519560|emb|CBK74781.1| SSU ribosomal protein S2P [Butyrivibrio fibrisolvens 16/4] Length = 242 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 100/230 (43%), Positives = 150/230 (65%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A VI D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYDVIFDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KTV I +L+++E++ Sbjct: 61 AQQGGNILFVGTKKQAQDAIASEAERCGMYYVNERWLGGMLTNFKTVQTRIARLKEIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++++KL + L GI++M +PD +F++D +E + +QEA L Sbjct: 121 EADGVFEQLPKKEVILLKKEQEKLTKVLGGIKEMNRIPDAIFIIDPKKEHICVQEAHALG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP+V V DTN +PD +DYVIPGNDD+ R++ L +A A I+ + + Sbjct: 181 IPLVGVCDTNCDPDELDYVIPGNDDAIRAVKLIVAKMADAVIEAKQGEMN 230 >gi|238759949|ref|ZP_04621103.1| 30S ribosomal protein S2 [Yersinia aldovae ATCC 35236] gi|238701856|gb|EEP94419.1| 30S ribosomal protein S2 [Yersinia aldovae ATCC 35236] Length = 241 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNQALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAAHNSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELTKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ + VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVATAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|299823055|ref|ZP_07054941.1| 30S ribosomal protein S2 [Listeria grayi DSM 20601] gi|299816584|gb|EFI83822.1| 30S ribosomal protein S2 [Listeria grayi DSM 20601] Length = 253 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 104/223 (46%), Positives = 156/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA D V E A+RS QY VN +WLGG +TN+ T+ + IQ L+ +E++ Sbjct: 61 AADNGTILFVGTKKQAQDSVKEEAERSGQYYVNHRWLGGTLTNFDTIKKRIQHLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI++M G+PD MF+VD +E++A+ EAR+L Sbjct: 121 AEDGTFEVLPKKEVVLLKKEQEKLERFLGGIKEMKGIPDAMFIVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|218247369|ref|YP_002372740.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 8801] gi|257061297|ref|YP_003139185.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 8802] gi|226697635|sp|B7K4S8|RS2_CYAP8 RecName: Full=30S ribosomal protein S2 gi|218167847|gb|ACK66584.1| ribosomal protein S2 [Cyanothece sp. PCC 8801] gi|256591463|gb|ACV02350.1| ribosomal protein S2 [Cyanothece sp. PCC 8802] Length = 268 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 139/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM YI+ RN HIIDL QT +++ A + + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAQLMENAYEYVRKS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LF+ TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 SEQGKRFLFIGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKGRVERLKELESM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL + L GI+ M LPD++ +VD RE AI E ++L Sbjct: 121 EENGAISRRPKKEAAVLRRELGKLDKYLGGIKTMRKLPDVVVIVDQRREYNAISECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPI++++DTN +PD D IP NDD+ RSI L +A A +G Q Sbjct: 181 IPIISMLDTNCDPDFADIPIPANDDAIRSIKLILGKLADAIYEGRHGQ 228 >gi|229013010|ref|ZP_04170175.1| 30S ribosomal protein S2 [Bacillus mycoides DSM 2048] gi|228748264|gb|EEL98124.1| 30S ribosomal protein S2 [Bacillus mycoides DSM 2048] Length = 233 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 99/229 (43%), Positives = 157/229 (68%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + Sbjct: 61 AAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L Sbjct: 121 QEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILESKQGEE 229 >gi|152986930|ref|YP_001346867.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PA7] gi|166226359|sp|A6V1D2|RS2_PSEA7 RecName: Full=30S ribosomal protein S2 gi|150962088|gb|ABR84113.1| ribosomal protein S2 [Pseudomonas aeruginosa PA7] Length = 246 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 116/249 (46%), Positives = 162/249 (65%), Gaps = 4/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE + Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD + Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD-EFVE 237 Query: 242 ETVVHSKEG 250 E S EG Sbjct: 238 EAPAESAEG 246 >gi|30263831|ref|NP_846208.1| 30S ribosomal protein S2 [Bacillus anthracis str. Ames] gi|42782918|ref|NP_980165.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 10987] gi|47529255|ref|YP_020604.1| 30S ribosomal protein S2 [Bacillus anthracis str. 'Ames Ancestor'] gi|49186677|ref|YP_029929.1| 30S ribosomal protein S2 [Bacillus anthracis str. Sterne] gi|49478399|ref|YP_037888.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141661|ref|YP_085168.1| 30S ribosomal protein S2 [Bacillus cereus E33L] gi|118479049|ref|YP_896200.1| 30S ribosomal protein S2 [Bacillus thuringiensis str. Al Hakam] gi|217961247|ref|YP_002339815.1| 30S ribosomal protein S2 [Bacillus cereus AH187] gi|218904955|ref|YP_002452789.1| ribosomal protein S2 [Bacillus cereus AH820] gi|222097272|ref|YP_002531329.1| 30S ribosomal protein s2 [Bacillus cereus Q1] gi|225865808|ref|YP_002751186.1| 30S ribosomal protein S2 [Bacillus cereus 03BB102] gi|227813265|ref|YP_002813274.1| 30S ribosomal protein S2 [Bacillus anthracis str. CDC 684] gi|229140468|ref|ZP_04269023.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST26] gi|229603327|ref|YP_002868065.1| 30S ribosomal protein S2 [Bacillus anthracis str. A0248] gi|254683466|ref|ZP_05147326.1| 30S ribosomal protein S2 [Bacillus anthracis str. CNEVA-9066] gi|254721987|ref|ZP_05183776.1| 30S ribosomal protein S2 [Bacillus anthracis str. A1055] gi|254735865|ref|ZP_05193571.1| 30S ribosomal protein S2 [Bacillus anthracis str. Western North America USA6153] gi|254739609|ref|ZP_05197303.1| 30S ribosomal protein S2 [Bacillus anthracis str. Kruger B] gi|254756018|ref|ZP_05208049.1| 30S ribosomal protein S2 [Bacillus anthracis str. Vollum] gi|254759321|ref|ZP_05211346.1| 30S ribosomal protein S2 [Bacillus anthracis str. Australia 94] gi|38258302|sp|Q81WK8|RS2_BACAN RecName: Full=30S ribosomal protein S2 gi|47606710|sp|Q9XBK3|RS2_BACC1 RecName: Full=30S ribosomal protein S2 gi|61215458|sp|Q636J9|RS2_BACCZ RecName: Full=30S ribosomal protein S2 gi|61215552|sp|Q6HEY8|RS2_BACHK RecName: Full=30S ribosomal protein S2 gi|166225240|sp|A0RHK0|RS2_BACAH RecName: Full=30S ribosomal protein S2 gi|226732172|sp|B7JJA5|RS2_BACC0 RecName: Full=30S ribosomal protein S2 gi|226732174|sp|B7HLG0|RS2_BACC7 RecName: Full=30S ribosomal protein S2 gi|254764453|sp|C3P5M9|RS2_BACAA RecName: Full=30S ribosomal protein S2 gi|254764454|sp|C3L7A0|RS2_BACAC RecName: Full=30S ribosomal protein S2 gi|254764455|sp|C1EP51|RS2_BACC3 RecName: Full=30S ribosomal protein S2 gi|254764456|sp|B9IVB6|RS2_BACCQ RecName: Full=30S ribosomal protein S2 gi|30258475|gb|AAP27694.1| 30S ribosomal protein S2 [Bacillus anthracis str. Ames] gi|42738845|gb|AAS42773.1| ribosomal protein S2 [Bacillus cereus ATCC 10987] gi|47504403|gb|AAT33079.1| ribosomal protein S2 [Bacillus anthracis str. 'Ames Ancestor'] gi|49180604|gb|AAT55980.1| ribosomal protein S2 [Bacillus anthracis str. Sterne] gi|49329955|gb|AAT60601.1| ribosomal protein S2 (30S ribosomal protein S2) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51975130|gb|AAU16680.1| ribosomal protein S2 (30S ribosomal protein S2) [Bacillus cereus E33L] gi|118418274|gb|ABK86693.1| SSU ribosomal protein S2P [Bacillus thuringiensis str. Al Hakam] gi|217062981|gb|ACJ77231.1| ribosomal protein S2 [Bacillus cereus AH187] gi|218537106|gb|ACK89504.1| ribosomal protein S2 [Bacillus cereus AH820] gi|221241330|gb|ACM14040.1| ribosomal protein S2 (30S ribosomal protein S2) [Bacillus cereus Q1] gi|225789396|gb|ACO29613.1| 30S ribosomal protein S2 [Bacillus cereus 03BB102] gi|227006482|gb|ACP16225.1| 30S ribosomal protein S2 [Bacillus anthracis str. CDC 684] gi|228643029|gb|EEK99305.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST26] gi|229267735|gb|ACQ49372.1| 30S ribosomal protein S2 [Bacillus anthracis str. A0248] gi|324327724|gb|ADY22984.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 233 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 158/229 (68%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A +V+ D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + Sbjct: 61 AAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L Sbjct: 121 QEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 229 >gi|3417446|dbj|BAA32342.1| ribosomal protein S2 [Pseudomonas aeruginosa] Length = 280 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 109/227 (48%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRGKQA 227 >gi|284048718|ref|YP_003399057.1| ribosomal protein S2 [Acidaminococcus fermentans DSM 20731] gi|283952939|gb|ADB47742.1| ribosomal protein S2 [Acidaminococcus fermentans DSM 20731] Length = 249 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 146/225 (64%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++ + + Sbjct: 1 MAIVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEECYSFLREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG +LFV TK QA + E A+R + VN +WLGGM+TN+KT+ I++L DLE++ Sbjct: 61 AAQGGTVLFVGTKKQAQAAIKEEAERCGMFYVNERWLGGMLTNFKTIQTRIKRLHDLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + + KL++ L GI+DM LP +FV+D +E AI EAR+L Sbjct: 121 EEEGTFELLPKKEVIVLRHEMAKLEKYLGGIKDMKKLPSALFVIDPRKEHNAILEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPIVA VDTN +PD VDY++P NDD+ R++ L +A A ++G Sbjct: 181 IPIVATVDTNCDPDEVDYLMPANDDAIRAVRLLTSKMADAVLEGK 225 >gi|149183990|ref|ZP_01862360.1| 30S ribosomal protein S2 [Bacillus sp. SG-1] gi|148848299|gb|EDL62579.1| 30S ribosomal protein S2 [Bacillus sp. SG-1] Length = 236 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 94/236 (39%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V E A+R+ Y +N +WLGG +TN++T+ + I +L+ +E++ Sbjct: 61 AGNGGKVLFVGTKKQAQESVKEEAERAGMYFINQRWLGGTLTNFETIQKRISRLKLIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L + L GI+DM LPD +F++D +E++A+ EAR+L Sbjct: 121 EEDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMQELPDALFIIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IPIV +VDTN +PD +D VIP NDD+ R++ L +A A ++ + + + A Sbjct: 181 IPIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAKQGEEAAVTAAE 236 >gi|30061726|ref|NP_835897.1| 30S ribosomal protein S2 [Shigella flexneri 2a str. 2457T] gi|56479617|ref|NP_706114.2| 30S ribosomal protein S2 [Shigella flexneri 2a str. 301] gi|61215761|sp|Q83SL4|RS2_SHIFL RecName: Full=30S ribosomal protein S2 gi|209573692|sp|Q0T840|RS2_SHIF8 RecName: Full=30S ribosomal protein S2 gi|30039968|gb|AAP15702.1| 30S ribosomal subunit protein S2 [Shigella flexneri 2a str. 2457T] gi|56383168|gb|AAN41821.2| 30S ribosomal subunit protein S2 [Shigella flexneri 2a str. 301] gi|313646772|gb|EFS11231.1| ribosomal protein S2 [Shigella flexneri 2a str. 2457T] gi|332762171|gb|EGJ92440.1| ribosomal protein S2 [Shigella flexneri 4343-70] gi|332765015|gb|EGJ95243.1| ribosomal protein S2 [Shigella flexneri K-671] gi|332768670|gb|EGJ98850.1| ribosomal protein S2 [Shigella flexneri 2930-71] gi|333010662|gb|EGK30095.1| ribosomal protein S2 [Shigella flexneri VA-6] Length = 241 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 VSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|317046982|ref|YP_004114630.1| 30S ribosomal protein S2 [Pantoea sp. At-9b] gi|316948599|gb|ADU68074.1| ribosomal protein S2 [Pantoea sp. At-9b] Length = 241 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 160/236 (67%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK A++ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAAAEAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + D Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLTAVATTVREGRSQDLAEQAEDA 236 >gi|184201271|ref|YP_001855478.1| 30S ribosomal protein S2 [Kocuria rhizophila DC2201] gi|229890171|sp|B2GKT6|RS2_KOCRD RecName: Full=30S ribosomal protein S2 gi|183581501|dbj|BAG29972.1| 30S ribosomal protein S2 [Kocuria rhizophila DC2201] Length = 285 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 115/267 (43%), Positives = 182/267 (68%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQ+L++GV FGH+ WNPKM+R+IF ERN +IIDL Q++ + KA + + T Sbjct: 1 MPVVTMRQMLDNGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLGFIDKAYEAVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN++TVS+ I ++++LEE+ Sbjct: 61 VAHGGTILFVGTKKQAQEAIAEQATRVGMPYVNHRWLGGMLTNFQTVSKRIDRMKELEEV 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+++KL+R L GIR++ P L+++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSQYTKKELLLLRREKEKLERTLGGIRNLTKTPSLIWIVDTKKEHLAVDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVA++DTN +PD V + IPGNDDS RS++L +VA A +G+ ++H+ + +A Sbjct: 181 GVPIVAILDTNCDPDEVAFPIPGNDDSIRSVSLLTRVVADAVAEGLMKRHNGK---SNAA 237 Query: 241 GETVVH-SKEGMQLEEDSQSSESSVLD 266 E + +E ++ E+ +S +++ + Sbjct: 238 EEPMAEWERELLEQHEEQKSQDAAPAE 264 >gi|325479501|gb|EGC82597.1| ribosomal protein S2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 278 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 107/276 (38%), Positives = 165/276 (59%), Gaps = 1/276 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM +YIF ERN +IIDL +T +++A + + D Sbjct: 1 MAVVSMKKLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTAIQIEEAYKEVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR+LFV TK QA D + + AKR Q+ V+ +WLGGM+TN+ T+ QSI+KL+ E + Sbjct: 61 VADGGRVLFVGTKKQAQDSIEQEAKRCGQFYVSHRWLGGMLTNFGTIRQSIEKLKKYEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L +++ D+L++ L GI++M LPD++FVVD E++A+ EA+ L Sbjct: 121 EEDGTFDLLPKKEVLQYQKEMDRLEKNLGGIKEMEQLPDVLFVVDPGEEEIAVHEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +PD VD IPGNDD+ R++ L ++A A ++ + Sbjct: 181 IPVIAIVDTNCDPDKVDVAIPGNDDAIRAVKLITSVMADAVVEANQGSQFDGSEEDFVED 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 ET + EE S + + + E Sbjct: 241 ETDEEEEVQQSEEEVSDDEIKEATEELKSQSLEESE 276 >gi|209574094|sp|Q0AYK4|RS2_SYNWW RecName: Full=30S ribosomal protein S2 Length = 232 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 149/229 (65%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL QTV A + + Sbjct: 1 MSVVTMKQLLEAGVHFGHQTRRWNPKMATYIYMERNGIYIIDLQQTVKKFDAAYEFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + + E A R Y VN +WLGGM+TN+KT+ + + +L++LE+ Sbjct: 61 AAAGKGVLFVGTKKQAQETIREEASRCGMYFVNQRWLGGMLTNYKTIKRRVLRLKELEKQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE + +R++L+R L GI++M LP +FVVD +E++A+ EAR+L Sbjct: 121 EAEGAFEVLSKKEVARLLNERERLERFLGGIKEMDKLPGAVFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 IPVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISSRIADAVLEGKQGEQ 229 >gi|146310371|ref|YP_001175445.1| 30S ribosomal protein S2 [Enterobacter sp. 638] gi|167011235|sp|A4W6R4|RS2_ENT38 RecName: Full=30S ribosomal protein S2 gi|145317247|gb|ABP59394.1| SSU ribosomal protein S2P [Enterobacter sp. 638] Length = 241 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|237808856|ref|YP_002893296.1| 30S ribosomal protein S2 [Tolumonas auensis DSM 9187] gi|259495227|sp|C4L864|RS2_TOLAT RecName: Full=30S ribosomal protein S2 gi|237501117|gb|ACQ93710.1| ribosomal protein S2 [Tolumonas auensis DSM 9187] Length = 242 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 112/221 (50%), Positives = 160/221 (72%), Gaps = 1/221 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNPKM+ +IF RNN HII+L +TVPM AL +S Sbjct: 1 MAKVSMRDMLQAGVHFGHQTRFWNPKMKPFIFGARNNVHIINLEKTVPMFDDALNYLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK A++ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKILFVGTKRAATEAVKEAAANCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L+ + TKKE L R+ +KL+++L GI+DMGGLPD++FV+D + E +AI+EA L Sbjct: 121 SLDGTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP+V++VDTNSNPD VDY+IPGNDD+ R++ L+ + A + Sbjct: 181 IPVVSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAADSI 221 >gi|291549950|emb|CBL26212.1| SSU ribosomal protein S2P [Ruminococcus torques L2-14] Length = 249 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 150/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I++L+D+E + Sbjct: 61 AAEGGTVLFVGTKKQAQDAIKAEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKDIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + I+++ KL++ L GI+DM LPD +F+VD +E++ +QEA L Sbjct: 121 AEDGTFEVLPKKEVIEIKKEWTKLEKNLGGIKDMKKLPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|319940032|ref|ZP_08014386.1| 30S ribosomal protein S2 [Streptococcus anginosus 1_2_62CV] gi|319810746|gb|EFW07073.1| 30S ribosomal protein S2 [Streptococcus anginosus 1_2_62CV] Length = 260 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 102/258 (39%), Positives = 162/258 (62%), Gaps = 9/258 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKFADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW+T+ + + +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWETIQKRVARLKEIKRM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGRQGEDNVESVEAELAA 240 Query: 242 --------ETVVHSKEGM 251 E +V EG Sbjct: 241 TDSQADSIEEIVEVVEGS 258 >gi|16330739|ref|NP_441467.1| 30S ribosomal protein S2 [Synechocystis sp. PCC 6803] gi|2500390|sp|P74071|RS2_SYNY3 RecName: Full=30S ribosomal protein S2 gi|1653232|dbj|BAA18147.1| 30S ribosomal protein S2 [Synechocystis sp. PCC 6803] Length = 269 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 96/228 (42%), Positives = 145/228 (63%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LLESGV FGH+ WNP+M++YI+ RN HIIDL QT +++ A + + + Sbjct: 1 MPVVSLADLLESGVHFGHQTRRWNPRMDQYIYTARNGVHIIDLVQTAQLMEDAYEYVRSS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A+R + VN +WLGGM+TNW+T+ + + +L++LE L Sbjct: 61 TINGKKFLFVGTKRQAAGIISQEAQRCGAHYVNQRWLGGMLTNWETIRKRVDRLKELEAL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ KL++ L GI++M LPD++ +VD RE AI E ++L Sbjct: 121 EASGGIDRRGKKEGSMLRRELGKLQKYLGGIKNMRKLPDVVVIVDQRREHNAIHECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPI+A++DTN +PD+VD IP NDD+ RSI L +A A +G Q Sbjct: 181 IPIIAMLDTNCDPDVVDVPIPANDDAIRSIKLIVGKLADAIYEGRHGQ 228 >gi|16759206|ref|NP_454823.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763606|ref|NP_459221.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140756|ref|NP_804098.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412489|ref|YP_149564.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161504666|ref|YP_001571778.1| 30S ribosomal protein S2 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|167990101|ref|ZP_02571201.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230523|ref|ZP_02655581.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168263917|ref|ZP_02685890.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464221|ref|ZP_02698124.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442333|ref|YP_002039456.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451227|ref|YP_002044206.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470466|ref|ZP_03076450.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735516|ref|YP_002113239.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249787|ref|YP_002145221.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265582|ref|ZP_03165656.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361424|ref|YP_002141060.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243582|ref|YP_002214177.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388369|ref|ZP_03214981.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204926698|ref|ZP_03217900.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205351553|ref|YP_002225354.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855734|ref|YP_002242385.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163139|ref|ZP_03348849.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425942|ref|ZP_03358692.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580798|ref|ZP_03362624.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609826|ref|ZP_03369652.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647836|ref|ZP_03377889.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852166|ref|ZP_03381698.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238911282|ref|ZP_04655119.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825715|ref|ZP_06544883.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54039454|sp|P66542|RS2_SALTI RecName: Full=30S ribosomal protein S2 gi|54041955|sp|P66541|RS2_SALTY RecName: Full=30S ribosomal protein S2 gi|61215385|sp|Q5PD63|RS2_SALPA RecName: Full=30S ribosomal protein S2 gi|189044999|sp|A9MPJ3|RS2_SALAR RecName: Full=30S ribosomal protein S2 gi|209573689|sp|A9N0R7|RS2_SALPB RecName: Full=30S ribosomal protein S2 gi|238689754|sp|B4TXS1|RS2_SALSV RecName: Full=30S ribosomal protein S2 gi|238689911|sp|B5BAM6|RS2_SALPK RecName: Full=30S ribosomal protein S2 gi|238690065|sp|B5F8T0|RS2_SALA4 RecName: Full=30S ribosomal protein S2 gi|238690312|sp|B5FJ16|RS2_SALDC RecName: Full=30S ribosomal protein S2 gi|238690451|sp|B5R3I2|RS2_SALEP RecName: Full=30S ribosomal protein S2 gi|238690550|sp|B5RHF4|RS2_SALG2 RecName: Full=30S ribosomal protein S2 gi|238690678|sp|B4TK44|RS2_SALHS RecName: Full=30S ribosomal protein S2 gi|238693522|sp|B4SUZ8|RS2_SALNS RecName: Full=30S ribosomal protein S2 gi|25294456|pir||AB0529 30S ribosomal protein S2 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418720|gb|AAL19180.1| 30S ribosomal subunit protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501497|emb|CAD08674.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi] gi|29136380|gb|AAO67947.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56126746|gb|AAV76252.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|160866013|gb|ABX22636.1| hypothetical protein SARI_02787 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|194400996|gb|ACF61218.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409531|gb|ACF69750.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456830|gb|EDX45669.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711018|gb|ACF90239.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632668|gb|EDX51122.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197092900|emb|CAR58329.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213490|gb|ACH50887.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243837|gb|EDY26457.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938098|gb|ACH75431.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605467|gb|EDZ04012.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323363|gb|EDZ08558.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271334|emb|CAR36127.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205331362|gb|EDZ18126.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335122|gb|EDZ21886.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205347496|gb|EDZ34127.1| ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707537|emb|CAR31811.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261245448|emb|CBG23238.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267991906|gb|ACY86791.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156843|emb|CBW16319.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911186|dbj|BAJ35160.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084470|emb|CBY94263.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616040|gb|EFY12957.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620823|gb|EFY17683.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623826|gb|EFY20663.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627274|gb|EFY24065.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630581|gb|EFY27345.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638201|gb|EFY34902.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640686|gb|EFY37337.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645530|gb|EFY42057.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648176|gb|EFY44643.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322657127|gb|EFY53410.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657497|gb|EFY53769.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663817|gb|EFY60017.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666650|gb|EFY62828.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672192|gb|EFY68304.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676497|gb|EFY72568.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679411|gb|EFY75456.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686262|gb|EFY82246.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128536|gb|ADX15966.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193442|gb|EFZ78650.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197536|gb|EFZ82671.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201195|gb|EFZ86264.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209590|gb|EFZ94523.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323216463|gb|EGA01189.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223347|gb|EGA07682.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225908|gb|EGA10128.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228551|gb|EGA12680.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236836|gb|EGA20912.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239664|gb|EGA23711.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242289|gb|EGA26318.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249951|gb|EGA33847.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252381|gb|EGA36232.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255664|gb|EGA39417.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262899|gb|EGA46449.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265385|gb|EGA48881.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271828|gb|EGA55246.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326621920|gb|EGE28265.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626579|gb|EGE32922.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987168|gb|AEF06151.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 241 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|289434942|ref|YP_003464814.1| 30S ribosomal protein S2 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171186|emb|CBH27728.1| 30S ribosomal protein S2 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313632964|gb|EFR99893.1| ribosomal protein S2 [Listeria seeligeri FSL N1-067] gi|313637578|gb|EFS02986.1| ribosomal protein S2 [Listeria seeligeri FSL S4-171] Length = 249 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 102/223 (45%), Positives = 156/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E++ Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|293115676|ref|ZP_05792588.2| ribosomal protein S2 [Butyrivibrio crossotus DSM 2876] gi|292808759|gb|EFF67964.1| ribosomal protein S2 [Butyrivibrio crossotus DSM 2876] Length = 275 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 98/238 (41%), Positives = 152/238 (63%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A I D Sbjct: 26 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYNAIYDV 85 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG ILFV TK QA + V A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 86 AAQGGSILFVGTKKQAQEAVKTEAERCGMYYVNERWLGGMLTNFKTIQSRINRLKEIEAM 145 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++++KL++ L GI++M +PD +F+VD +E + +QEA L Sbjct: 146 EADGTFDVLPKKEVIQLKKEQEKLEKNLGGIKNMKRIPDAIFIVDPKKEAICVQEAHILG 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I + + AD Sbjct: 206 IPLIGIVDTNCDPEEIDYVIPGNDDAIRAVKLIVSKMADAVIAANQGETAEEYADVAE 263 >gi|290473657|ref|YP_003466529.1| 30S ribosomal subunit protein S2 [Xenorhabdus bovienii SS-2004] gi|289172962|emb|CBJ79733.1| 30S ribosomal subunit protein S2 [Xenorhabdus bovienii SS-2004] Length = 241 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 157/241 (65%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNSALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK A + + E A QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAACEAIKEEALGCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD++IPGNDD+ R++ L+ VA+A DG ++ + + Sbjct: 181 IPVFAIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVRDGRSQDLAVQAEEGLVDA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|172035621|ref|YP_001802122.1| 30S ribosomal protein S2 [Cyanothece sp. ATCC 51142] gi|226793816|sp|B1WQZ8|RS2_CYAA5 RecName: Full=30S ribosomal protein S2 gi|171697075|gb|ACB50056.1| 30S ribosomal protein S2 [Cyanothece sp. ATCC 51142] Length = 269 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 99/268 (36%), Positives = 149/268 (55%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ LL +GV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + Sbjct: 1 MAVVSLEDLLNAGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 ADKGKRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE ++L Sbjct: 121 EESGQIARRPKKEASVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+++++DTN +PD D IP NDD+ RSI L +A A +G Q + Sbjct: 181 IPMISLLDTNCDPDYADIPIPANDDAIRSIKLILGKLADAIYEGRHGQLDSDDDYEEFDE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + EED S S +G+E Sbjct: 241 SLAEGDYDDYDEEEDEDSETVSSQEGEE 268 >gi|310659009|ref|YP_003936730.1| 30S ribosomal protein S2 [Clostridium sticklandii DSM 519] gi|308825787|emb|CBH21825.1| 30S ribosomal subunit protein S2 [Clostridium sticklandii] Length = 248 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 98/228 (42%), Positives = 153/228 (67%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A I + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKIEEAYSFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA D + E A+RS Y VN +WLGGM+TN++T+ + I +LR+LE++ Sbjct: 61 AETGKPILFVGTKKQAQDSIKEEAERSGMYYVNERWLGGMLTNYQTIKKRIDRLRELEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++KL++ L+GI+DM +P +F+VD +E++A++EA +L Sbjct: 121 QEDGTFDVLPKKEVIQLMNEKEKLEKYLNGIKDMPEVPGAIFIVDPRKERIAVKEAHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+V +VDTN +PD +D+ IPGNDD+ R++ L ++ A I+ Q Sbjct: 181 IPVVGIVDTNCDPDEIDFPIPGNDDAIRAVKLIASTISQAIIEAKQGQ 228 >gi|326791510|ref|YP_004309331.1| ribosomal protein S2 [Clostridium lentocellum DSM 5427] gi|326542274|gb|ADZ84133.1| ribosomal protein S2 [Clostridium lentocellum DSM 5427] Length = 247 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 110/253 (43%), Positives = 164/253 (64%), Gaps = 7/253 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T + +A VI + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTAKKVDEAYNVIREA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG++LFV TK QA + + A+RS Y VN++WLGGM+TN+ T+ + +L+ LE + Sbjct: 61 AAEGGKVLFVGTKKQAQESIKSEAERSGMYYVNNRWLGGMLTNFSTIKSRVARLKQLETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++ DKL++ L GI++M LP LMFVVD +E++AIQEA L Sbjct: 121 EQDGTFEVLPKKEVIELRKEMDKLEKNLGGIKEMKELPSLMFVVDPRKERIAIQEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A I+ + G +++ Sbjct: 181 IPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLIVAKMADAIIE------ANQGEIFEAST 234 Query: 242 ETVVHSKEGMQLE 254 E VV + E + E Sbjct: 235 EAVVEATEEVIAE 247 >gi|313124041|ref|YP_004034300.1| 30S ribosomal protein s2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280604|gb|ADQ61323.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 253 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 146/226 (64%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ Sbjct: 61 AQDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L Sbjct: 121 AEDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAVIEGKQ 226 >gi|319441373|ref|ZP_07990529.1| 30S ribosomal protein S2 [Corynebacterium variabile DSM 44702] Length = 279 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 170/257 (66%), Gaps = 5/257 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTFIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG IL+V TK QA + + A+R VN +WLGGM+TN++TV++ +++L++L+ + Sbjct: 61 VAHGGNILYVGTKKQAQEGIASEAERVGMPYVNHRWLGGMLTNFQTVAKRLRRLKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + E+ G TKKE L + R+R+KL+R L GI DM +P +++VDTN+E +A+ EA++L Sbjct: 121 DSAEDGYAGRTKKEILMLTRERNKLERVLGGIADMSKVPSALWIVDTNKEHIAVAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG---IARQHSYMGADT 237 IP+VA++DTN +PD+VD+ IPGNDD+ R+ L +++SA +G A + + +T Sbjct: 181 NIPVVAILDTNCDPDVVDFPIPGNDDAIRATNLLTSVISSAVEEGRKVRAERQAAAAKET 240 Query: 238 KSAGETVVHSKEGMQLE 254 E E Q + Sbjct: 241 AGDAEVAEIVVEAEQAQ 257 >gi|290968864|ref|ZP_06560401.1| ribosomal protein S2 [Megasphaera genomosp. type_1 str. 28L] gi|290781160|gb|EFD93751.1| ribosomal protein S2 [Megasphaera genomosp. type_1 str. 28L] Length = 244 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 100/243 (41%), Positives = 157/243 (64%), Gaps = 3/243 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+R+IF ERN +IIDL +TV ++A D Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKTEEAYNFARDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG+ILFV TK QA + + A+R + +N +WLGGM+TN++T+ + +++L+ LE+ Sbjct: 61 VADGGKILFVGTKKQAQESIKNEAERCNMFYINERWLGGMLTNFQTIEKRVKRLKLLEKQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++ + +KL + L GI++M LPD +F++D +E++A+ EAR+L Sbjct: 121 AEDGTFDVLPKKEVTILKHEMEKLHKYLGGIKEMKKLPDALFIIDPKKEEIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH--SYMGADTKS 239 IPI+A VDTN +PDL+D+ IP NDD+ R++ L +A A ++G + + DT Sbjct: 181 IPIIATVDTNCDPDLIDFPIPANDDAIRAVKLLSGKIADAVLEGNQGEQVEEPVADDTGV 240 Query: 240 AGE 242 A E Sbjct: 241 AEE 243 >gi|300715396|ref|YP_003740199.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661] gi|299061232|emb|CAX58341.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661] Length = 241 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+IL V TK AS+ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILIVGTKRAASESVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G ++ + + + Sbjct: 181 IPVFAIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVATTVREGRSQDLAQQAEEKFAEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|288549319|ref|ZP_05966691.2| hypothetical protein ENTCAN_05028 [Enterobacter cancerogenus ATCC 35316] gi|288318656|gb|EFC57594.1| ribosomal protein S2 [Enterobacter cancerogenus ATCC 35316] Length = 241 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+IL V TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILMVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+I+L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAISLYLGAVAATVREGRSQDLATQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|62178786|ref|YP_215203.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505897|sp|Q57T39|RS2_SALCH RecName: Full=30S ribosomal protein S2 gi|62126419|gb|AAX64122.1| 30S ribosomal subunit protein S2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713240|gb|EFZ04811.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 241 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 164/241 (68%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SARKGKILFVGTKRAASEAVREAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|325685956|gb|EGD28019.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 253 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 146/226 (64%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ Sbjct: 61 AQDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L Sbjct: 121 AEDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAIIEGKQ 226 >gi|300812589|ref|ZP_07093006.1| ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496462|gb|EFK31567.1| ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 253 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 146/226 (64%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ W+PKM+ YIF +RN +IIDL +T+ ML A + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ Sbjct: 61 AQDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L Sbjct: 121 AEDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGTMADAVIEGKQ 226 >gi|16800835|ref|NP_471103.1| 30S ribosomal protein S2 [Listeria innocua Clip11262] gi|116873091|ref|YP_849872.1| 30S ribosomal protein S2 [Listeria welshimeri serovar 6b str. SLCC5334] gi|25009214|sp|Q92B01|RS2_LISIN RecName: Full=30S ribosomal protein S2 gi|123458516|sp|A0AJB1|RS2_LISW6 RecName: Full=30S ribosomal protein S2 gi|16414254|emb|CAC96998.1| 30S ribosomal protein S2 [Listeria innocua Clip11262] gi|116741969|emb|CAK21093.1| 30S ribosomal protein S2 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 249 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 102/223 (45%), Positives = 156/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E++ Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|65321155|ref|ZP_00394114.1| COG0052: Ribosomal protein S2 [Bacillus anthracis str. A2012] Length = 233 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 157/229 (68%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A +V+ D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + Sbjct: 61 AAEGGDILFVGTKKQAQXAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L Sbjct: 121 QEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 229 >gi|326204051|ref|ZP_08193912.1| ribosomal protein S2 [Clostridium papyrosolvens DSM 2782] gi|325985818|gb|EGD46653.1| ribosomal protein S2 [Clostridium papyrosolvens DSM 2782] Length = 252 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 103/229 (44%), Positives = 148/229 (64%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + A I + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKKVDDAYFFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A+RS Q+ VN++WLGGM+TN+KT+++ I +L L + Sbjct: 61 AMNGQDVLFVGTKKQAQDSIKEEAERSGQFFVNNRWLGGMLTNFKTITKRINRLNQLTAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++++ L++ L GI++M LP MFVVD +E+ AI EA+RL Sbjct: 121 EADGTFDVLPKKEVSKLKKEMADLEKNLGGIKNMKKLPGAMFVVDPRKERNAILEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A I+G + Sbjct: 181 IPVVAIVDTNCDPDEVDFVIPGNDDAIRAVKLIAAKMADAVIEGRQGEQ 229 >gi|297617171|ref|YP_003702330.1| ribosomal protein S2 [Syntrophothermus lipocalidus DSM 12680] gi|297145008|gb|ADI01765.1| ribosomal protein S2 [Syntrophothermus lipocalidus DSM 12680] Length = 232 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 153/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL QTV ++A + Sbjct: 1 MSIVTMKQLLEAGVHFGHQTRRWNPKMAPYIYMERNGIYIIDLQQTVKKFEEAFDFVRSM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ G ILFV TK QA + + + A R + VN +WLGGM+TN+KT+ + + +L++LE++ Sbjct: 61 VSEGKTILFVGTKKQAQETIKDEATRCGMFYVNQRWLGGMLTNFKTIRKRVYRLKELEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + +R+KL+R L GI+DM LP ++VVD +EK+A+ EAR+L+ Sbjct: 121 EEEGAFELLPKKEVARLRAEREKLERFLRGIKDMDELPGAVYVVDPRKEKIAVAEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP++ +VDTN +PD +DY+IPGNDD+ R++ L +A A ++G + + Sbjct: 181 IPVIGIVDTNCDPDEIDYIIPGNDDAIRAVKLITSKIADAVLEGKQGEQASA 232 >gi|16803698|ref|NP_465183.1| 30S ribosomal protein S2 [Listeria monocytogenes EGD-e] gi|46907887|ref|YP_014276.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str. F2365] gi|47093767|ref|ZP_00231516.1| ribosomal protein S2 [Listeria monocytogenes str. 4b H7858] gi|47097503|ref|ZP_00235044.1| ribosomal protein S2 [Listeria monocytogenes str. 1/2a F6854] gi|217964192|ref|YP_002349870.1| ribosomal protein S2 [Listeria monocytogenes HCC23] gi|224499239|ref|ZP_03667588.1| 30S ribosomal protein S2 [Listeria monocytogenes Finland 1988] gi|226224258|ref|YP_002758365.1| 30S ribosomal protein S2 [Listeria monocytogenes Clip81459] gi|254824281|ref|ZP_05229282.1| ribosomal protein S2 [Listeria monocytogenes FSL J1-194] gi|254829462|ref|ZP_05234149.1| ribosomal protein S2 [Listeria monocytogenes FSL N3-165] gi|254832061|ref|ZP_05236716.1| 30S ribosomal protein S2 [Listeria monocytogenes 10403S] gi|254852282|ref|ZP_05241630.1| ribosomal protein S2 [Listeria monocytogenes FSL R2-503] gi|254898175|ref|ZP_05258099.1| 30S ribosomal protein S2 [Listeria monocytogenes J0161] gi|254912332|ref|ZP_05262344.1| 30S ribosomal protein S2 [Listeria monocytogenes J2818] gi|254931598|ref|ZP_05264957.1| ribosomal protein S2 [Listeria monocytogenes HPB2262] gi|254936659|ref|ZP_05268356.1| ribosomal protein S2 [Listeria monocytogenes F6900] gi|284802050|ref|YP_003413915.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5578] gi|284995192|ref|YP_003416960.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5923] gi|290893249|ref|ZP_06556236.1| ribosomal protein S2 [Listeria monocytogenes FSL J2-071] gi|300766500|ref|ZP_07076449.1| ribosomal protein S2 [Listeria monocytogenes FSL N1-017] gi|315282614|ref|ZP_07870985.1| ribosomal protein S2 [Listeria marthii FSL S4-120] gi|25009209|sp|Q8Y6M6|RS2_LISMO RecName: Full=30S ribosomal protein S2 gi|61215604|sp|Q71Z11|RS2_LISMF RecName: Full=30S ribosomal protein S2 gi|254764481|sp|B8DFR3|RS2_LISMH RecName: Full=30S ribosomal protein S2 gi|259495218|sp|C1KVV4|RS2_LISMC RecName: Full=30S ribosomal protein S2 gi|16411094|emb|CAC99736.1| 30S ribosomal protein S2 [Listeria monocytogenes EGD-e] gi|46881156|gb|AAT04453.1| ribosomal protein S2 [Listeria monocytogenes serotype 4b str. F2365] gi|47014118|gb|EAL05110.1| ribosomal protein S2 [Listeria monocytogenes str. 1/2a F6854] gi|47017854|gb|EAL08638.1| ribosomal protein S2 [Listeria monocytogenes str. 4b H7858] gi|217333462|gb|ACK39256.1| ribosomal protein S2 [Listeria monocytogenes HCC23] gi|225876720|emb|CAS05429.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601877|gb|EEW15202.1| ribosomal protein S2 [Listeria monocytogenes FSL N3-165] gi|258605588|gb|EEW18196.1| ribosomal protein S2 [Listeria monocytogenes FSL R2-503] gi|258609255|gb|EEW21863.1| ribosomal protein S2 [Listeria monocytogenes F6900] gi|284057612|gb|ADB68553.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5578] gi|284060659|gb|ADB71598.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5923] gi|290557231|gb|EFD90758.1| ribosomal protein S2 [Listeria monocytogenes FSL J2-071] gi|293583152|gb|EFF95184.1| ribosomal protein S2 [Listeria monocytogenes HPB2262] gi|293590313|gb|EFF98647.1| 30S ribosomal protein S2 [Listeria monocytogenes J2818] gi|293593516|gb|EFG01277.1| ribosomal protein S2 [Listeria monocytogenes FSL J1-194] gi|300512793|gb|EFK39891.1| ribosomal protein S2 [Listeria monocytogenes FSL N1-017] gi|307571241|emb|CAR84420.1| rpsB [Listeria monocytogenes L99] gi|313608439|gb|EFR84371.1| ribosomal protein S2 [Listeria monocytogenes FSL F2-208] gi|313613739|gb|EFR87512.1| ribosomal protein S2 [Listeria marthii FSL S4-120] gi|328465020|gb|EGF36299.1| 30S ribosomal protein S2 [Listeria monocytogenes 1816] gi|332312098|gb|EGJ25193.1| 30S ribosomal protein S2 [Listeria monocytogenes str. Scott A] Length = 249 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 102/223 (45%), Positives = 155/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E + Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|88857977|ref|ZP_01132619.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas tunicata D2] gi|88819594|gb|EAR29407.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas tunicata D2] Length = 242 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 114/226 (50%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL + + Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEHTVPMFNEALSFLRNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK AS+ V EAA+RS QY VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASNKGKILFVGTKRAASEAVKEAAQRSDQYYVNHRWLGGMLTNWKTVRQSIKRLKELEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ DKL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMLSREMDKLEKSLGGIKDMGGLPDALFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+V++VDTNSNPD VD+++PGNDD+ R++ L+ VA I+G Sbjct: 181 IPVVSIVDTNSNPDGVDFIVPGNDDAIRAVQLYTGAVAQNIIEGRE 226 >gi|238918773|ref|YP_002932287.1| 30S ribosomal protein S2 [Edwardsiella ictaluri 93-146] gi|238868341|gb|ACR68052.1| ribosomal protein S2, putative [Edwardsiella ictaluri 93-146] Length = 236 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 115/236 (48%), Positives = 160/236 (67%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL +S +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA + Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALKCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ + Sbjct: 121 FDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA A +G ++ +T + E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREGRSQDLVAQAEETMAEAE 236 >gi|73662821|ref|YP_301602.1| 30S ribosomal protein S2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123775343|sp|Q49X41|RS2_STAS1 RecName: Full=30S ribosomal protein S2 gi|72495336|dbj|BAE18657.1| 30S ribosomal protein S2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 262 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 107/267 (40%), Positives = 170/267 (63%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA D V A+R+ Q+ VN +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQDSVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G ++ + A Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQGV-----SNEEVAA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + E + E + E++ ++ Sbjct: 236 EQNIDLDESKEATEAETTEENTSVESN 262 >gi|114566417|ref|YP_753571.1| 30S ribosomal protein S2 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337352|gb|ABI68200.1| SSU ribosomal protein S2P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 236 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 102/229 (44%), Positives = 149/229 (65%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L T++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL QTV A + + Sbjct: 5 LSVVTMKQLLEAGVHFGHQTRRWNPKMATYIYMERNGIYIIDLQQTVKKFDAAYEFVKSV 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + + E A R Y VN +WLGGM+TN+KT+ + + +L++LE+ Sbjct: 65 AAAGKGVLFVGTKKQAQETIREEASRCGMYFVNQRWLGGMLTNYKTIKRRVLRLKELEKQ 124 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE + +R++L+R L GI++M LP +FVVD +E++A+ EAR+L Sbjct: 125 EAEGAFEVLSKKEVARLLNERERLERFLGGIKEMDKLPGAVFVVDPRKERIAVAEARKLN 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G + Sbjct: 185 IPVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISSRIADAVLEGKQGEQ 233 >gi|119898200|ref|YP_933413.1| 30S ribosomal protein S2 [Azoarcus sp. BH72] gi|166225238|sp|A1K6S1|RS2_AZOSB RecName: Full=30S ribosomal protein S2 gi|119670613|emb|CAL94526.1| 30S ribosomal protein S2 [Azoarcus sp. BH72] Length = 251 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 106/252 (42%), Positives = 171/252 (67%), Gaps = 4/252 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNP+M YIF +RN HI++L +T+ +A+ + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMVKYNEAMNFVRKLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L+++E ++ Sbjct: 63 RGTILFVSTKRQAREILAEEARRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMIED 122 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + +K+E L + R+ +KL++++ GI+DMGGLPD +F++D K+A+ EA++L IP+ Sbjct: 123 GSIERLSKREALTVTRELEKLQKSIGGIKDMGGLPDAIFIIDVGYHKIAVTEAQKLGIPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 V VVDTN +P+ +DY+IPGNDDSSR+I L+ VA A ++G ++ + + G+ Sbjct: 183 VGVVDTNHSPEGIDYIIPGNDDSSRAIRLYARGVADAVLEGRSQVLQEI---VAAGGDEF 239 Query: 245 VHSKEGMQLEED 256 V +EG Q ++ Sbjct: 240 VEVEEGSQEQQG 251 >gi|110834004|ref|YP_692863.1| 30S ribosomal protein S2 [Alcanivorax borkumensis SK2] gi|123050547|sp|Q0VQF7|RS2_ALCBS RecName: Full=30S ribosomal protein S2 gi|110647115|emb|CAL16591.1| 30S ribosomal protein S2 [Alcanivorax borkumensis SK2] Length = 252 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 117/252 (46%), Positives = 161/252 (63%), Gaps = 4/252 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R +L++GV FGH+ WNPKM YIF RN HII+L QT+P+ A+ ++ Sbjct: 1 MSSVTMRDMLKAGVHFGHQTRYWNPKMNTYIFGARNKIHIINLEQTLPLFNDAMAFLNKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A +ILFV TK A V E A+R V+ +WLGGM+TNWKT+ QSI++ R+LE + Sbjct: 61 AASNNKILFVGTKRAAQKAVSEEAQRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRELEAQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L +R+ DKL+R++ GI+DMGGLPD +FV+D + E +A+QEAR+L Sbjct: 121 FQDGTFDKLTKKEALMRKREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIALQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---TK 238 IP+VAVVDTNSNPD VDYVIPGNDD+ R+I L+ A ++G + G + + Sbjct: 181 IPVVAVVDTNSNPDGVDYVIPGNDDAIRAIQLYVKAAADVILEGKQYAQNQTGGESEFVE 240 Query: 239 SAGETVVHSKEG 250 A E EG Sbjct: 241 VADEAAGEKAEG 252 >gi|303228534|ref|ZP_07315362.1| ribosomal protein S2 [Veillonella atypica ACS-134-V-Col7a] gi|302516781|gb|EFL58695.1| ribosomal protein S2 [Veillonella atypica ACS-134-V-Col7a] Length = 239 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 98/238 (41%), Positives = 154/238 (64%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + Sbjct: 61 ASQGEVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L Sbjct: 121 AEDGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA VDTN +PD V++ IP NDD+ R++ L +A A ++G + G + Sbjct: 181 IPVVATVDTNCDPDEVEFPIPANDDAIRAVKLLAGKMADAVLEGRQGESFEEGNAEAA 238 >gi|295396954|ref|ZP_06807076.1| 30S ribosomal protein S2 [Aerococcus viridans ATCC 11563] gi|294974807|gb|EFG50512.1| 30S ribosomal protein S2 [Aerococcus viridans ATCC 11563] Length = 257 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 107/258 (41%), Positives = 168/258 (65%), Gaps = 7/258 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ +A + D Sbjct: 6 MPVISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKLVDQAYNAMRDL 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G LFV TK QA D + + A R+ QY VN +WLGG +TNW+T+ + I+ L++++E+ Sbjct: 66 VGNDGIALFVGTKKQAQDSIADEATRAGQYYVNHRWLGGTLTNWETIQKRIKHLKNIKEM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ KKE + + +++++L++ L GI DM +PD+MFVVD +EK+AIQEA +L Sbjct: 126 EVDGTFDVLPKKEVVGLLKEKERLEKFLGGIEDMPRIPDVMFVVDPRKEKIAIQEAHKLN 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +PD VDYVIP NDD+ R+I L +A A ++ GA ++ Sbjct: 186 IPVIAMVDTNCDPDEVDYVIPSNDDAIRAIKLITGGMAEAILEAKQ------GAQEEAEQ 239 Query: 242 ETVVHSKEGMQLEEDSQS 259 + V +G ++ ++ Sbjct: 240 DVTVEDFKGDEVLDEVAE 257 >gi|88606909|ref|YP_505002.1| 30S ribosomal protein S2 [Anaplasma phagocytophilum HZ] gi|123750113|sp|Q2GKU9|RS2_ANAPZ RecName: Full=30S ribosomal protein S2 gi|88597972|gb|ABD43442.1| ribosomal protein S2 [Anaplasma phagocytophilum HZ] Length = 296 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 131/272 (48%), Positives = 183/272 (67%), Gaps = 5/272 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVI 59 ++P+F+IR L+E+GV GH+ WNP M YI+ + HIIDL +T +L+ AL V+ Sbjct: 3 SIPEFSIRDLMEAGVHLGHKAGRWNPAMAPYIYGVHRYKDIHIIDLRKTAVLLRNALSVL 62 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 D V R GR+LFV TK QAS+ + E A R QY VN +WLGGM+TNW+TVS SI++L D Sbjct: 63 YDVVHRRGRVLFVGTKVQASNVIAEEAARCGQYYVNHRWLGGMLTNWETVSSSIRRLLDF 122 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+LLN + FTKKE L ++KR+KL+R+L GIR+MGGLP ++FV+DTN+E +AIQEA + Sbjct: 123 EKLLNDTDAKFTKKELLMFDKKREKLERSLGGIREMGGLPHILFVIDTNKEHIAIQEANK 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L+IP+VAV+DTNS+P VDY IPGNDDS RSI FC V++ ++ I G S Sbjct: 183 LKIPVVAVLDTNSDPRGVDYPIPGNDDSIRSIDFFCRAVSNTILEAIRSDLMSSGI---S 239 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 +V +K+G ++ S ++ G + + Sbjct: 240 VAGSVGQAKDGSVVDSGKGKSIAAHKGGGKAS 271 >gi|304312448|ref|YP_003812046.1| 30S ribosomal protein S2 [gamma proteobacterium HdN1] gi|301798181|emb|CBL46403.1| 30S ribosomal protein S2 [gamma proteobacterium HdN1] Length = 250 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 116/251 (46%), Positives = 162/251 (64%), Gaps = 3/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R+L+++G FGH+ WNPKM++YIF RN HII+L TVP L AL I+ Sbjct: 1 MAQITMRELIKAGAHFGHQTRFWNPKMKQYIFGARNKIHIINLEHTVPALNDALNFINGQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 AR ++LFV TK AS + E A R+ VN +WLGGM+TNWKT+ QSI++LRDLE E Sbjct: 61 AARKNKVLFVGTKRAASTLIQEQATRAGMPYVNHRWLGGMLTNWKTIRQSIRRLRDLETE 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+R+ GI+DMGGLPD +FVVD E++AI EA +L Sbjct: 121 SKDGTFDKLTKKEALMRTRELEKLERSFGGIKDMGGLPDAIFVVDVMHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNS+PD VDYVIP NDD+ +++ L+ A+A ++G R+++ A Sbjct: 181 IPVIGIVDTNSDPDGVDYVIPANDDAIKAVELYVTAFANACLEG--REYAQAQAGGAGDK 238 Query: 242 ETVVHSKEGMQ 252 + V E Sbjct: 239 DAFVEVDEAAS 249 >gi|315222789|ref|ZP_07864675.1| ribosomal protein S2 [Streptococcus anginosus F0211] gi|315188092|gb|EFU21821.1| ribosomal protein S2 [Streptococcus anginosus F0211] Length = 279 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 101/260 (38%), Positives = 165/260 (63%), Gaps = 3/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 20 MAVISMKQLLEAGVHFGHQTRRWNPKMSKYIFTERNGIHVIDLQQTVKFADQAYDFMRDA 79 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A+R+ QY +N +WLGG +TNW+T+ + + +L++++ + Sbjct: 80 AANDAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWETIQKRVARLKEIKRM 139 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L Sbjct: 140 EEDGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLG 199 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--S 239 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 200 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGRQGEDNVESVEAELAA 259 Query: 240 AGETVVHSKEGMQLEEDSQS 259 A +E +++ E S Sbjct: 260 ADSQADSIEEIVEVVEGSNE 279 >gi|282600811|ref|ZP_05979781.2| ribosomal protein S2 [Subdoligranulum variabile DSM 15176] gi|282571013|gb|EFB76548.1| ribosomal protein S2 [Subdoligranulum variabile DSM 15176] Length = 242 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + DT Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNFVRDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I ++ L+ + Sbjct: 61 AAEGGEILFVGTKKQAQESIRDEATRCGMHYVNARWLGGMLTNFRTIRKRIDRMEQLKTM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L Sbjct: 121 QADGTFDLLPKKEVVKLELEMEKLDKYLGGVKNMKSLPKAMFIVDPHKERIAVSEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A+A ++G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISGAMANAVLEGKQ 226 >gi|67922290|ref|ZP_00515803.1| Ribosomal protein S2, bacterial and organelle form [Crocosphaera watsonii WH 8501] gi|67855866|gb|EAM51112.1| Ribosomal protein S2, bacterial and organelle form [Crocosphaera watsonii WH 8501] Length = 269 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 150/268 (55%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LL +GV FGH+ WNPKM +YI+ RN HIIDL QT +++ A Q + + Sbjct: 1 MPVVSLEDLLNAGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMEDAYQYVRNN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R VN +WLGGM+TNW+T+ +++L++LE + Sbjct: 61 SDKGKRFLFVGTKRQAAGIIAQEASRCGANYVNQRWLGGMLTNWETIKTRVERLKELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + R+ KL++ L GI+ M PD++ +VD RE AIQE ++L Sbjct: 121 EDSGQIARRPKKEASVLRRELGKLQKYLGGIKTMRRPPDVVVIVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+++++DTN +PD D IP NDD+ RSI L +A A +G Q + Sbjct: 181 IPMISLLDTNCDPDYADIPIPANDDAIRSIKLILGRLADAIYEGRHGQLDSDDDYEEFEE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + EE+ + +G+E Sbjct: 241 SLAEGDYDDYDEEEEEGVEAVASGEGEE 268 >gi|298245136|ref|ZP_06968942.1| ribosomal protein S2 [Ktedonobacter racemifer DSM 44963] gi|297552617|gb|EFH86482.1| ribosomal protein S2 [Ktedonobacter racemifer DSM 44963] Length = 306 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 111/284 (39%), Positives = 165/284 (58%), Gaps = 7/284 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA +++QLLE+GV FGH+ WNPKM+++IF +RN HIIDL QTV L +A + + Sbjct: 1 MA-NIISMKQLLEAGVHFGHQTRRWNPKMQQFIFMDRNGIHIIDLQQTVTRLNEAYKFVE 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A GG +LFV TK QA + V E AKR + +N +WLGGM+TN++T+ I+ LRDLE Sbjct: 60 QLAASGGTLLFVGTKKQAQEAVAEEAKRCGMFYINQRWLGGMLTNFQTIQLRIKYLRDLE 119 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + E + KKE ++ +L+R L GI+DM LP +F++DT +E+ A+ EA R Sbjct: 120 RRRDSGEFERLPKKEVQRLQDDIARLERILGGIKDMRSLPSALFIIDTRKERTAVLEALR 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI+A+ DTN +PD +DY IP NDD+ R++ L C +A AA++G + + +T Sbjct: 180 LEIPIIALADTNCDPDEMDYPIPANDDAIRAVRLLCAKIADAAVEGRRQLEALHKDETTG 239 Query: 240 AGETVVHSKEGMQLEEDSQ-----SSESSVLDGQEVAVVPELMS 278 E V + + + E++ E A + Sbjct: 240 EEEGQVEAPQAAAAAPQVAAPQTTAPEAAPQASSEAAPQASSEA 283 >gi|81428876|ref|YP_395876.1| 30S ribosomal protein S2 [Lactobacillus sakei subsp. sakei 23K] gi|123728636|sp|Q38W64|RS2_LACSS RecName: Full=30S ribosomal protein S2 gi|78610518|emb|CAI55569.1| 30S ribosomal protein S2 [Lactobacillus sakei subsp. sakei 23K] Length = 264 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 102/263 (38%), Positives = 168/263 (63%), Gaps = 1/263 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+++IF ERN +IIDL +TV M+ A + + Sbjct: 1 MAVLSMKQLLEAGVHFGHQTRRWNPKMKKFIFTERNGIYIIDLQKTVRMVDDAYDFVKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G LFV TK QA D + E + R+ QY VN +WLGG +TNW T+ + I++L++++ + Sbjct: 61 AANEGVFLFVGTKKQAQDAIAEESVRAGQYFVNHRWLGGTLTNWDTIQKRIKRLKEIKAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE ++++++KL++ L GI DM +PD+MFVVD +E++AI+EA++L Sbjct: 121 DEDGTFERLPKKEVALLKKQQEKLEKFLGGIEDMPRIPDVMFVVDPRKERIAIKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTNS+PD +D +IP NDD+ R++ L +A A I+G + A + Sbjct: 181 IPVVAMVDTNSDPDDIDVIIPSNDDAIRAVRLITAKMADAIIEGRQGEDDVEEATFAAEN 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 ++ +E ++ E + + + Sbjct: 241 KSADSMEEIVEAVEGNNDTNTDA 263 >gi|303232199|ref|ZP_07318902.1| ribosomal protein S2 [Veillonella atypica ACS-049-V-Sch6] gi|302513305|gb|EFL55344.1| ribosomal protein S2 [Veillonella atypica ACS-049-V-Sch6] Length = 250 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 153/235 (65%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + Sbjct: 61 ASQGEVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L Sbjct: 121 AEDGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+VA VDTN +PD V++ IP NDD+ R++ L +A A ++G + D Sbjct: 181 IPVVATVDTNCDPDEVEFPIPANDDAIRAVKLLAGKMADAVLEGRQGESFDEALD 235 >gi|15643525|ref|NP_228571.1| 30S ribosomal protein S2 [Thermotoga maritima MSB8] gi|7388195|sp|Q9WZM1|RS2_THEMA RecName: Full=30S ribosomal protein S2 gi|4981290|gb|AAD35844.1|AE001746_5 ribosomal protein S2 [Thermotoga maritima MSB8] Length = 262 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 103/226 (45%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + + Sbjct: 1 MPVVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + A+R + VN++WLGG++TN+KT+ I KL +LEE+ Sbjct: 61 ASEGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIDKLIELEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + KKE+ I R +KL++ L G+++M LPD++++VD +EK+A+ EA +L Sbjct: 121 EQSGKLEELPKKEQSRIRRVLEKLRKNLGGLKEMRRLPDIIYIVDPRKEKIAVAEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A A ++G Sbjct: 181 IPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIADAYLEGRE 226 >gi|163941565|ref|YP_001646449.1| 30S ribosomal protein S2 [Bacillus weihenstephanensis KBAB4] gi|229564293|sp|A9VT65|RS2_BACWK RecName: Full=30S ribosomal protein S2 gi|163863762|gb|ABY44821.1| ribosomal protein S2 [Bacillus weihenstephanensis KBAB4] Length = 233 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 98/229 (42%), Positives = 157/229 (68%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + Sbjct: 61 AAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L++ L GI+DM GLP +F+VD +E++A+ EAR+L Sbjct: 121 QEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILETKQGEE 229 >gi|154500331|ref|ZP_02038369.1| hypothetical protein BACCAP_03998 [Bacteroides capillosus ATCC 29799] gi|150270836|gb|EDM98119.1| hypothetical protein BACCAP_03998 [Bacteroides capillosus ATCC 29799] Length = 241 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 151/241 (62%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL +TV L++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAAYIYTERNGIYIIDLQKTVKKLEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + E A R Y VN++WLGGM+TN+KT+ + +L L+++ Sbjct: 61 AQNGQTLLFVGTKKQAQEAIKEEAGRCGGYYVNARWLGGMLTNFKTMRGRVDRLNQLKKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + KL++ L G+ +M LP +FVVD +E+ AI EAR+L Sbjct: 121 QEDGTFDMLPKKEVMKHLGEIAKLEKYLGGVVEMKKLPGALFVVDPRKERNAINEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R+I L ++A+A ++G Q + ++ Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAIKLISSVMANAIMEGKQGQDAPEEKTEETVA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|322831588|ref|YP_004211615.1| ribosomal protein S2 [Rahnella sp. Y9602] gi|321166789|gb|ADW72488.1| ribosomal protein S2 [Rahnella sp. Y9602] Length = 241 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELQKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEAAHNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFVIPGNDDAIRAVNLYLSAVAATVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|313891960|ref|ZP_07825561.1| ribosomal protein S2 [Dialister microaerophilus UPII 345-E] gi|313119603|gb|EFR42794.1| ribosomal protein S2 [Dialister microaerophilus UPII 345-E] Length = 253 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 99/255 (38%), Positives = 161/255 (63%), Gaps = 3/255 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM R+IF ERN +IIDL +TV +++A I + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKVEEAYNFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + + + A R + VN +WLGGM+TN++T+ + +L++LE++ Sbjct: 61 AANGQTILFVGTKKQAQNAIKDEALRCNMFYVNQRWLGGMLTNFRTIQNRVARLKELEKM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R+ DKL++ L GI+DM LP + V+D+ +E++A++EAR+L Sbjct: 121 FEDGTVEQYPKKEVILMKRELDKLEKNLGGIKDMKKLPGCIVVIDSKKEEIAVKEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A VDTN +PD++D+ IP NDD+ R++ L +A A + RQ + Sbjct: 181 IPVIATVDTNCDPDVIDFPIPANDDAIRAVKLLASKMADAVL--EGRQGQQEEQGEQEVA 238 Query: 242 ETVVHSKEGMQLEED 256 E V +E ++ + Sbjct: 239 EDVADEQEVIEESAE 253 >gi|57239236|ref|YP_180372.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] gi|58579198|ref|YP_197410.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] gi|58617251|ref|YP_196450.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Gardel] gi|75507503|sp|Q5FGZ8|RS2_EHRRG RecName: Full=30S ribosomal protein S2 gi|81672800|sp|Q5HB22|RS2_EHRRW RecName: Full=30S ribosomal protein S2 gi|57161315|emb|CAH58238.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] gi|58416863|emb|CAI27976.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Gardel] gi|58417824|emb|CAI27028.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden] Length = 286 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 123/268 (45%), Positives = 186/268 (69%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP+FT+R L+E GV FGH+ WNPKM YI+ N+ HII+L TV +L+ AL + D Sbjct: 4 LPKFTMRDLVECGVHFGHKTSRWNPKMAPYIYGVHNDIHIINLQSTVFLLKNALSALYDI 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + GR+LF+ TK QAS + + A R QY +N++WLGGM+TNW+T+S SI+KLR+ E+L Sbjct: 64 VLKRGRVLFIGTKVQASAIIADEATRCGQYYINNRWLGGMLTNWETISLSIKKLREYEKL 123 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + FTKKE L E+KR KL R++ GI +MGGLP ++FV+DTN+E++AI+EA +L I Sbjct: 124 LQNVDNQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHVIFVIDTNKERIAIREANKLNI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++AV+DTNS+P +DY IPGNDD+ RSI FC +++ ++ I + G + + Sbjct: 184 PVIAVLDTNSDPTGIDYPIPGNDDAVRSIDFFCKIISDTILEAIRSDLAKSGINVDGIKD 243 Query: 243 TVVHSKEG-MQLEEDSQSSESSVLDGQE 269 V +E +++ +D++S++S+ ++ E Sbjct: 244 FSVERREDFLKMNKDNKSNKSNTINADE 271 >gi|332701339|ref|ZP_08421427.1| ribosomal protein S2 [Desulfovibrio africanus str. Walvis Bay] gi|332551488|gb|EGJ48532.1| ribosomal protein S2 [Desulfovibrio africanus str. Walvis Bay] Length = 263 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 112/263 (42%), Positives = 172/263 (65%), Gaps = 3/263 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV + + A I+D+ Sbjct: 1 MSYVSMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVGLFRTAHDFIADS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +FV TK QA + + A+R+ QY + ++WLGG +TN++T+S+SI++L+ LE + Sbjct: 61 VAAGGSCIFVGTKRQAQEAIKTEAERAGQYYITNRWLGGTLTNFQTISKSIERLKKLEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + ++KKE + R+ KL L GI+++ GLP + FV+D NRE++A++E R+L Sbjct: 121 FEDGTINRYSKKEISRMSREMGKLSGDLGGIKNLEGLPSVAFVIDPNREEIAVKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--QHSYMGADTKS 239 IPIVAVVDTN +PDL+DYVIPGNDD+ R+I LF +A A ++G AR + D + Sbjct: 181 IPIVAVVDTNCDPDLIDYVIPGNDDAIRAIKLFVTAMADACVEGKARAEEQGTAKRDKSA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 + + EG+ ++ + E+ Sbjct: 241 KPKAAPKAVEGLDTDDADVTEEA 263 >gi|86606296|ref|YP_475059.1| 30S ribosomal protein S2 [Synechococcus sp. JA-3-3Ab] gi|123724576|sp|Q2JU28|RS2_SYNJA RecName: Full=30S ribosomal protein S2 gi|86554838|gb|ABC99796.1| ribosomal protein S2 [Synechococcus sp. JA-3-3Ab] Length = 267 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 99/236 (41%), Positives = 142/236 (60%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ WNPKM YIF ERN HIIDL QT L +A + + + Sbjct: 1 MSVVSLPQLLEAGVHFGHKASRWNPKMRPYIFAERNGIHIIDLVQTARYLNEAYEYVREG 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + A R Y VN +WLGGM+TNW T+ I +L+++EE+ Sbjct: 61 AEKGWRFLFVGTKRQAAGIIAHEATRCGSYYVNQRWLGGMLTNWATIKTRIDRLKEIEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K+E ++R+ KL++ L GI+ M LPD + +VD RE A+QE +L+ Sbjct: 121 QSSGLLDRLPKQEAARLKRELAKLEKYLGGIKTMRKLPDAVIIVDQRREANAVQECIKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IPI++++DTN +PDL D IP NDD+ R+I L +A A +G Q + D Sbjct: 181 IPIISLLDTNCDPDLSDVFIPSNDDAIRAIKLIVGKLADAIYEGRHGQLDTVEEDE 236 >gi|294102178|ref|YP_003554036.1| ribosomal protein S2 [Aminobacterium colombiense DSM 12261] gi|293617158|gb|ADE57312.1| ribosomal protein S2 [Aminobacterium colombiense DSM 12261] Length = 266 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 99/246 (40%), Positives = 157/246 (63%), Gaps = 1/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE GV FGH+ WNPKM+ YIF ERN +IIDL +TV L+KA + + Sbjct: 1 MSVVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVRGLEKAYAFVREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D + E A+RS QY +N +WLGG++TN+ T+ + + ++ +L ++ Sbjct: 61 AQNNGSLLFVGTKRQAQDTIREEAERSGQYFINQRWLGGLLTNFSTIRKRVTRMVELRKM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++N KKE ++++ KL++ L GI M +PD +F++D RE++AI EA++L Sbjct: 121 AAEDNWSNLPKKEVALLKKELAKLEKYLSGIAGMKNVPDALFLIDPRREEIAILEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +P+++DY IPGNDD+ R+I L L+A A I+G + + + + Sbjct: 181 IPVIAIVDTNCDPEMIDYPIPGNDDAIRAIKLISGLMADAMIEGRQGEDADVKKVVEEGE 240 Query: 242 ETVVHS 247 E Sbjct: 241 EVTDED 246 >gi|198283284|ref|YP_002219605.1| 30S ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667004|ref|YP_002425872.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247805|gb|ACH83398.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519217|gb|ACK79803.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 250 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 113/248 (45%), Positives = 164/248 (66%), Gaps = 1/248 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+R LLE+GV FGH++ W+PKM Y+F ERN HII+L T+PML+ AL + Sbjct: 3 SNVTMRALLEAGVHFGHQSRYWHPKMAPYLFGERNRIHIINLEHTLPMLRTALSFVEQIS 62 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + GRILFV TK QA + V + A+RS + VN +WLGG +TN+KT+ QSI++L +L+++ Sbjct: 63 RKHGRILFVGTKRQAREAVEQEARRSGAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQMT 122 Query: 124 -NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + TKKE L + R+RDKL+R+L GI+DM GLPD +FV+D E +A+ EAR+L I Sbjct: 123 ADGTMEKLTKKEGLTLTRERDKLERSLGGIKDMNGLPDAIFVIDVGHENIAVLEARKLGI 182 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++ VVD+N +P L+D+ IPGNDD++R+I L+ LVA A +DG S + + E Sbjct: 183 PVIGVVDSNCDPLLIDFPIPGNDDATRAIRLYASLVADAILDGRQGGESGLLDEFVEVDE 242 Query: 243 TVVHSKEG 250 + Sbjct: 243 ETIEIDAD 250 >gi|150020818|ref|YP_001306172.1| 30S ribosomal protein S2 [Thermosipho melanesiensis BI429] gi|166226766|sp|A6LLI6|RS2_THEM4 RecName: Full=30S ribosomal protein S2 gi|149793339|gb|ABR30787.1| ribosomal protein S2 [Thermosipho melanesiensis BI429] Length = 257 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 100/226 (44%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGHR WNPKM+ YIF R +IIDL +T +L++A + D Sbjct: 1 MAVVTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLEEAYNFVRDK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + A+R + VN +WLGG++TN++T+ + I KL +LEE+ Sbjct: 61 AAEGGTILFVGTKKQAQQVIKQEAERCGAFYVNHRWLGGLLTNFQTIRKRIDKLIELEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E KKE+ + R DKL++ L G+++M +PD++++VD +E+ A+ EA L+ Sbjct: 121 EANGEFDNLPKKEQSRLRRILDKLRKNLGGLKEMDRIPDVIYIVDPRKERNAVYEANLLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP V++VDTN +PD +DY+IPGNDD+ R+I L +A A ++G Sbjct: 181 IPTVSIVDTNCDPDEIDYIIPGNDDAIRAIQLITSKIADAYLEGKE 226 >gi|146321831|ref|YP_001201542.1| 30S ribosomal protein S2 [Streptococcus suis 98HAH33] gi|145692637|gb|ABP93142.1| 30S ribosomal protein S2 [Streptococcus suis 98HAH33] gi|292559250|gb|ADE32251.1| Ribosomal protein S2 [Streptococcus suis GZ1] Length = 300 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 163/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D Sbjct: 43 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDA 102 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + Sbjct: 103 AANDAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM 162 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L Sbjct: 163 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLG 222 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--- 238 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + Sbjct: 223 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGNQGEDSVAAVEAELAA 282 Query: 239 -----SAGETVVHSKEG 250 + E +V EG Sbjct: 283 EPASTESIEELVEVVEG 299 >gi|57651825|ref|YP_186131.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus COL] gi|300912179|ref|ZP_07129622.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH70] gi|61215355|sp|Q5HGH6|RS2_STAAC RecName: Full=30S ribosomal protein S2 gi|57286011|gb|AAW38105.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus COL] gi|300886425|gb|EFK81627.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus TCH70] Length = 258 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 101/248 (40%), Positives = 160/248 (64%), Gaps = 4/248 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Q + + Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEG---QQGVSNEEVAAEQ 237 Query: 242 ETVVHSKE 249 + KE Sbjct: 238 NIDLDEKE 245 >gi|153855563|ref|ZP_01996679.1| hypothetical protein DORLON_02697 [Dorea longicatena DSM 13814] gi|149751984|gb|EDM61915.1| hypothetical protein DORLON_02697 [Dorea longicatena DSM 13814] Length = 273 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 98/224 (43%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q ++D Sbjct: 29 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYQAVADI 88 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 89 AAEGGSILFVGTKKQAQDAIKVEAERCGMYYVNERWLGGMLTNFKTIKSRIARLKNIERM 148 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ DKL++ L GI+DM LPD +FVVD +E++ +QEA L Sbjct: 149 SEDGTFDVLPKKEVIQLKKEWDKLEKNLGGIKDMKTLPDAIFVVDPKKERICVQEAHTLG 208 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A ++ Sbjct: 209 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVVEA 252 >gi|332637901|ref|ZP_08416764.1| 30S ribosomal protein S2 [Weissella cibaria KACC 11862] Length = 258 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 156/250 (62%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++ +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMSEYIFTERNGIYIIDLQKTVKLVDQAYNYVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D + E A R+ + VN +WLGG +TNW T+ + + +L++L + Sbjct: 61 AANGATVLFVGTKKQAQDAIAEEATRANMFYVNHRWLGGTLTNWSTIQKRVARLKELRAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + R+KL++ L GI DM +PDL+F+VD ++E+LA+QEA +L Sbjct: 121 AEDGTFDRLPKKEVALLNKSREKLEKFLGGIADMPKIPDLLFIVDPHKEQLAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN++PD +D IP NDD+ R++ L +A A I+G + + D + G Sbjct: 181 IPIVAMVDTNADPDQIDVKIPSNDDAIRAVRLITAKMADAIIEGNQGEDAVAAEDFAAEG 240 Query: 242 ETVVHSKEGM 251 S E + Sbjct: 241 ADKAASIEEL 250 >gi|225027217|ref|ZP_03716409.1| hypothetical protein EUBHAL_01473 [Eubacterium hallii DSM 3353] gi|224955446|gb|EEG36655.1| hypothetical protein EUBHAL_01473 [Eubacterium hallii DSM 3353] Length = 265 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 102/228 (44%), Positives = 153/228 (67%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A I D Sbjct: 23 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYNAIRDC 82 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 83 VANGGKILFVGTKKQAQDSIKNEAERCGMYYVNQRWLGGMLTNFKTIQSRIAQLKKIEAM 142 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +N++++++KL++ L GI++M +PD++FVVD +E++ IQEA L Sbjct: 143 EADGTFDVLPKKEVINLKKQQEKLEKNLGGIKEMQDIPDMIFVVDPRKERICIQEAETLG 202 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+G Q Sbjct: 203 IPLVGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEGNQGQ 250 >gi|295108498|emb|CBL22451.1| SSU ribosomal protein S2P [Ruminococcus obeum A2-162] Length = 242 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 98/224 (43%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D + A+R Q+ VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 61 VANGGNILFVGTKKQAQDAIKAEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKQIEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++ KL++ L GI++M LPD +F+VD +E++ +QEA L Sbjct: 121 EADGTFEVLPKKEVIELRKELAKLQKNLGGIKEMKRLPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|220909599|ref|YP_002484910.1| 30S ribosomal protein S2 [Cyanothece sp. PCC 7425] gi|254764471|sp|B8HXK4|RS2_CYAP4 RecName: Full=30S ribosomal protein S2 gi|219866210|gb|ACL46549.1| ribosomal protein S2 [Cyanothece sp. PCC 7425] Length = 260 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 10/255 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q+LE+GV FGH+ WNPKM YIF ERN HIIDL QT ++ +A + + Sbjct: 1 MPVLSLAQMLEAGVHFGHQARRWNPKMSPYIFTERNGVHIIDLVQTAQLMDEAYEYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LF+ TK QA+ V A+R Y +N +WLGGM+TNW T+ +++L++LE Sbjct: 61 SEEGKRFLFIGTKRQAAGLVAHEAQRCGSYFINQRWLGGMLTNWTTIKTRVERLKELERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K+E + R+ +KL++ L GI+ M LPD++ +VD RE A+QE +L Sbjct: 121 QETGALDLLPKQEASMLRREMEKLQKYLGGIKQMRKLPDVVLIVDVRREYNAVQECHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +PD VD IP NDD+ RSI L +A +G Q Sbjct: 181 IPIVSLLDTNCDPDEVDIPIPANDDAIRSIKLIVGKLADGIYEGRHGQLDT--------- 231 Query: 242 ETVVHSKEGMQLEED 256 E EG + + D Sbjct: 232 EEDYEDYEGAEADYD 246 >gi|117925137|ref|YP_865754.1| 30S ribosomal protein S2P [Magnetococcus sp. MC-1] gi|166225282|sp|A0L8Q5|RS2_MAGSM RecName: Full=30S ribosomal protein S2 gi|117608893|gb|ABK44348.1| SSU ribosomal protein S2P [Magnetococcus sp. MC-1] Length = 262 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 108/262 (41%), Positives = 177/262 (67%), Gaps = 2/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++R+LLE+G FGH+ WNPKM+R+IF RN HII+L ++V ML+ A + DT Sbjct: 1 MAKYSVRELLEAGFHFGHQTKRWNPKMKRHIFGARNGVHIINLQKSVVMLRDACNFVRDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG +LFV TK QA + V A+R+ Q+ VN +WLGG +TNW+T+ SI++L++++++ Sbjct: 61 VQGGGTVLFVGTKRQAVELVSAEARRTGQFYVNHRWLGGTLTNWRTIQGSIRRLKEIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + TK+E ++R+ K++RAL GI+DM P+L+ VVDT +E +A++EA +L Sbjct: 121 RVDGTFEALTKRETQQLDREGQKIERALGGIKDMERQPNLIIVVDTRKESIAVKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VD+N +PD +DY +PGNDD+ R++ LF + + I+G+ + SAG Sbjct: 181 IPVVALVDSNCDPDPIDYPVPGNDDAIRALTLFISKMGDSVIEGMQLAGREIPNSGISAG 240 Query: 242 ETVVHSKEGMQL-EEDSQSSES 262 E + ++ Q E + QS+E+ Sbjct: 241 EGSMEAQMLSQAGEGEMQSAEA 262 >gi|257066450|ref|YP_003152706.1| 30S ribosomal protein S2 [Anaerococcus prevotii DSM 20548] gi|256798330|gb|ACV28985.1| ribosomal protein S2 [Anaerococcus prevotii DSM 20548] Length = 280 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 114/277 (41%), Positives = 176/277 (63%), Gaps = 7/277 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM +YIF ERN +IIDL +T +++A + D Sbjct: 1 MAVVSMKKLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTAVQIEEAYAQVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR+LFV TK QA D + + AKRS Q+ V+++WLGGM+TN+KT+ QSI KL+ E + Sbjct: 61 VADGGRVLFVGTKKQAQDSIEQEAKRSGQFYVSNRWLGGMLTNFKTIRQSINKLKKYEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L +++ D+L++ L GI++M LPDL+FVVD E +A+ EA+ L Sbjct: 121 EEDGTFDLLPKKEVLQYQKEMDRLEKNLGGIKEMEDLPDLLFVVDPGEEAIAVHEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++++VDTN +PD VD IPGNDD+ R++ L ++A A ++ + G+ ++ Sbjct: 181 IPVISIVDTNCDPDEVDLAIPGNDDAIRAVKLITSVIADAVVE------ANQGSQFDASE 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E V E ++EE+++ + V D + EL S Sbjct: 235 EDFVEEDEAEEIEENTEEAVEEVSDDEIKEAAEELKS 271 >gi|300724795|ref|YP_003714120.1| 30S ribosomal subunit protein S2 [Xenorhabdus nematophila ATCC 19061] gi|297631337|emb|CBJ92032.1| 30S ribosomal subunit protein S2 [Xenorhabdus nematophila ATCC 19061] Length = 241 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 159/241 (65%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNGALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ + +AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAIKDAALSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + + Sbjct: 181 IPVFAIVDTNSDPDGVDFIIPGNDDAIRAVKLYLTAVATAVREGRSQDLAVQAEEGLVDA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|153003171|ref|YP_001377496.1| 30S ribosomal protein S2 [Anaeromyxobacter sp. Fw109-5] gi|209573648|sp|A7H716|RS2_ANADF RecName: Full=30S ribosomal protein S2 gi|152026744|gb|ABS24512.1| ribosomal protein S2 [Anaeromyxobacter sp. Fw109-5] Length = 315 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 119/251 (47%), Positives = 168/251 (66%), Gaps = 4/251 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +TV + + AL+ +SD VA+ Sbjct: 12 ITMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVGLARGALRFVSDAVAK 71 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D + E A RS QY V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 72 GGMVLFVGTKKQAQDAIREEASRSGQYHVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 131 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE +ER+R+KL++ L GI++M LP +FV+DT +E +A+ EA RL IP+ Sbjct: 132 GTYERLPKKEVAQLEREREKLEKNLGGIKEMSRLPAAIFVIDTKKEHIAVHEANRLGIPV 191 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH---SYMGADTKSAG 241 VAVVDTN +P+ ++YVIPGNDD+ RSI LF +A A I+G AR + G + + Sbjct: 192 VAVVDTNCDPEGIEYVIPGNDDAIRSIRLFTGKIAEACIEGRARYSTWAAQHGEERRPGE 251 Query: 242 ETVVHSKEGMQ 252 E + E Q Sbjct: 252 EDRDAASERGQ 262 >gi|269138093|ref|YP_003294793.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202] gi|267983753|gb|ACY83582.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202] gi|304558137|gb|ADM40801.1| SSU ribosomal protein S2p (SAe) [Edwardsiella tarda FL6-60] Length = 236 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 114/236 (48%), Positives = 158/236 (66%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL +S +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ + Sbjct: 121 FDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA A +G ++ +T + E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREGRSQDLVAQAEETMAEAE 236 >gi|259046752|ref|ZP_05737153.1| 30S ribosomal protein S2 [Granulicatella adiacens ATCC 49175] gi|259036648|gb|EEW37903.1| 30S ribosomal protein S2 [Granulicatella adiacens ATCC 49175] Length = 251 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 109/251 (43%), Positives = 159/251 (63%), Gaps = 4/251 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ A + + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLVDDAYNYMHEVAENGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 LFV TK QA D V + A RS QY VN +WLGG +TNW T+ I++L+ ++E+ + Sbjct: 61 IALFVGTKKQAQDAVKDEAIRSGQYYVNHRWLGGTLTNWDTIQTRIKRLKKIKEMQEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++ DKL++ L GI+DM +PD+MF+VD +E++A+QEA +L IPIVA Sbjct: 121 FEVLPKKEVGILLKELDKLEKYLGGIKDMPRIPDVMFIVDPRKERIAVQEAHKLNIPIVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA---DTKSAGET 243 +VDTN +PD +D VIP NDD+ R++ L +A A I+G + + D ++ E Sbjct: 181 MVDTNCDPDEIDVVIPSNDDAIRAVKLIVAKMADAFIEGNQGEDVAVDVEDLDKDTSLED 240 Query: 244 VVHSKEGMQLE 254 + EG E Sbjct: 241 IEKLVEGDNAE 251 >gi|229918655|ref|YP_002887301.1| 30S ribosomal protein S2 [Exiguobacterium sp. AT1b] gi|259495214|sp|C4L650|RS2_EXISA RecName: Full=30S ribosomal protein S2 gi|229470084|gb|ACQ71856.1| ribosomal protein S2 [Exiguobacterium sp. AT1b] Length = 246 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 99/226 (43%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A RS + +N +WLGG +TN+ T+ + I +L+ LE++ Sbjct: 61 AAEGGNVLFVGTKKQAQDTIKEEAIRSGMFFINERWLGGTLTNFSTIKKRINRLKQLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ +L++ L GI+DM G+PD +F+VD +E++AI EA +L Sbjct: 121 EEDGTFEVLPKKEVIILKKEMTRLEKFLGGIKDMPGVPDALFIVDPRKERIAIAEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAIIEAKQ 226 >gi|170017342|ref|YP_001728261.1| ribosomal protein S2 [Leuconostoc citreum KM20] gi|169804199|gb|ACA82817.1| Ribosomal protein S2 [Leuconostoc citreum KM20] Length = 273 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 107/255 (41%), Positives = 162/255 (63%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A + + Sbjct: 16 MAVISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFMRNA 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 76 STDGANFLFVGTKKQASDAIAEEAARAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEAM 135 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L Sbjct: 136 AEDGTFEQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLN 195 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S + Sbjct: 196 IPVVAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDSAPEDAFVAGD 255 Query: 242 ETVVHSKEGMQLEED 256 E +E + E+ Sbjct: 256 ENTESIEEIANIVEE 270 >gi|227504799|ref|ZP_03934848.1| 30S ribosomal protein S2 [Corynebacterium striatum ATCC 6940] gi|227198649|gb|EEI78697.1| 30S ribosomal protein S2 [Corynebacterium striatum ATCC 6940] Length = 268 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 106/247 (42%), Positives = 162/247 (65%), Gaps = 2/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 61 VAHGGSVLFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A++EA +L Sbjct: 121 DAAEDGYKGRTKKEILMLTRERIKLERVLGGISEMSKAPSALWIVDTNKEHIAVKEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ R+ L ++A+A +G + A K A Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRATKLLSGIIATAVEEGKKAREERQLAAAKEA 240 Query: 241 GETVVHS 247 Sbjct: 241 AGDSAEK 247 >gi|15606996|ref|NP_214378.1| 30S ribosomal protein S2 [Aquifex aeolicus VF5] gi|7388166|sp|O67809|RS2_AQUAE RecName: Full=30S ribosomal protein S2 gi|2984239|gb|AAC07767.1| ribosomal protein S02 [Aquifex aeolicus VF5] Length = 274 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 169/261 (64%), Gaps = 2/261 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++++LLE+GV FGH WNPKM YI+ R+ HIIDL++T+ ML+ A +SD Sbjct: 1 MPVVSMKELLEAGVHFGHSKSRWNPKMAPYIYGVRHGIHIIDLNKTIVMLEDAYHFVSDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +A+GG ILFV TK QA D + E A+R + VN +W+GG++TN++TV +SI KL+ LE + Sbjct: 61 IAQGGEILFVGTKKQAKDIIKEEAERCGAFYVNERWVGGLLTNFQTVRKSIMKLQTLERM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE N+ RK +KL++ +GIRDM LPD++++VDT REK+A+ EAR+L Sbjct: 121 EEDGIFDVLPKKEVRNLRRKMEKLRKLYNGIRDMKKLPDVIWIVDTVREKIAVSEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-ADTKSA 240 IPIVA+ D+N +P ++DY IPGNDD+ +SI L +A A ++G R+ S TK Sbjct: 181 IPIVAIADSNCDPTVIDYTIPGNDDAIKSIKLLTSKIADAVLEGKQRRESAEEVVPTKER 240 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 + +E E+ + SE Sbjct: 241 RPVEITERERQLFEQAVEMSE 261 >gi|33357956|pdb|1P87|B Chain B, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754059|pdb|2AVY|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754115|pdb|2AW7|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138054|pdb|2I2P|B Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138125|pdb|2I2U|B Chain B, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|157836041|pdb|2QOU|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836095|pdb|2QOW|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836145|pdb|2QOY|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836199|pdb|2QP0|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429718|pdb|2QAL|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429770|pdb|2QAN|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429828|pdb|2QB9|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429880|pdb|2QBB|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429932|pdb|2QBD|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429984|pdb|2QBF|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430038|pdb|2QBH|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430091|pdb|2QBJ|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431391|pdb|2Z4K|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431444|pdb|2Z4M|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988789|pdb|2VHO|B Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 3 Of 4) gi|168988810|pdb|2VHP|B Chain B, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 4 Of 4) gi|197107298|pdb|3DF1|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The First 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107350|pdb|3DF3|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|329665993|pdb|3J00|B Chain B, Structure Of The Ribosome-Secye Complex In The Membrane Environment Length = 240 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 ATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIA 60 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL- 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQS 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L I Sbjct: 121 QDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 181 PVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 240 >gi|257439094|ref|ZP_05614849.1| ribosomal protein S2 [Faecalibacterium prausnitzii A2-165] gi|257198472|gb|EEU96756.1| ribosomal protein S2 [Faecalibacterium prausnitzii A2-165] Length = 257 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 101/227 (44%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L +A + + Sbjct: 18 TMAVVSMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKLDEAYNYVKE 77 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 A GG ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I ++ L + Sbjct: 78 VAAEGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMDQLAK 137 Query: 122 L-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + N + KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L Sbjct: 138 MKENGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKL 197 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 198 NIPIVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQ 244 >gi|315612184|ref|ZP_07887099.1| 30S ribosomal protein S2 [Streptococcus sanguinis ATCC 49296] gi|315315745|gb|EFU63782.1| 30S ribosomal protein S2 [Streptococcus sanguinis ATCC 49296] Length = 286 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 28 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 87 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 88 AANDAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM 147 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 148 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 208 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAAVEAEFAAS 267 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 268 EAQADSIEEI 277 >gi|146319634|ref|YP_001199346.1| 30S ribosomal protein S2 [Streptococcus suis 05ZYH33] gi|145690440|gb|ABP90946.1| 30S ribosomal protein S2 [Streptococcus suis 05ZYH33] Length = 300 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 163/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D Sbjct: 43 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDA 102 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + Sbjct: 103 AANEAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM 162 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L Sbjct: 163 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLG 222 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--- 238 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + Sbjct: 223 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGNQGEDSVAAVEAELAA 282 Query: 239 -----SAGETVVHSKEG 250 + E +V EG Sbjct: 283 EPASTESIEELVEVVEG 299 >gi|114321014|ref|YP_742697.1| SSU ribosomal protein S2P [Alkalilimnicola ehrlichii MLHE-1] gi|122311392|sp|Q0A7I0|RS2_ALHEH RecName: Full=30S ribosomal protein S2 gi|114227408|gb|ABI57207.1| SSU ribosomal protein S2P [Alkalilimnicola ehrlichii MLHE-1] Length = 248 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 112/253 (44%), Positives = 157/253 (62%), Gaps = 7/253 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +LE+GV FGH+ WNPKM YIF +RN HII+L +T+P+ Q+A+ + Sbjct: 1 MANVSMRDMLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTLPLYQEAMNYVGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG++LFV TK A V E A R V+ +WLGGM+TN++TV SI++L+DLE Sbjct: 61 AAEGGKVLFVGTKRSARKAVREEASRCGMPYVDHRWLGGMLTNFRTVKGSIRRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TK+E L++ R+ +KL R L GI+DM GLPD MFV+D E +A+QEAR+L Sbjct: 121 AEDGTFDKLTKREALSLSREMEKLNRTLSGIKDMNGLPDAMFVIDVGFEHIAVQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN++P VDYVIPGNDD+ R+I L+ A A ++ G D Sbjct: 181 IPVVAVVDTNNSPREVDYVIPGNDDAIRAIQLYLSGAADAVLEAKTATARPGGDD----- 235 Query: 242 ETVVHSKEGMQLE 254 V E + + Sbjct: 236 -DFVEVDEATEQQ 247 >gi|319948058|ref|ZP_08022232.1| 30S ribosomal protein S2 [Dietzia cinnamea P4] gi|319438297|gb|EFV93243.1| 30S ribosomal protein S2 [Dietzia cinnamea P4] Length = 293 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 112/272 (41%), Positives = 176/272 (64%), Gaps = 3/272 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLL++G FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVISMKQLLDAGAHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDQAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A + VN +WLGGM+TN++TV Q + +L++LE + Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEEAAKVGMPYVNQRWLGGMLTNFQTVHQRLLRLKELESM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+++KL+R L G+RDM +P +++VVDTN+E +A+ EAR+L Sbjct: 121 EQTGGFEGRTKKEILMLTREKNKLERTLGGMRDMSKVPSVVWVVDTNKEHIAVGEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PD+VDY IP NDD+ RS+ + ++ASA +G+ + S G T Sbjct: 181 IPVVALLDTNCDPDVVDYPIPANDDAIRSVTVLTRVIASAVAEGLKAR-SQAGKATGEEA 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVV 273 E + E QL++ + + + +G V Sbjct: 240 EPLAEW-ETEQLDQVTGGAATEGTEGPAADVT 270 >gi|302670755|ref|YP_003830715.1| ribosomal protein S2 RpsB [Butyrivibrio proteoclasticus B316] gi|302395228|gb|ADL34133.1| ribosomal protein S2 RpsB [Butyrivibrio proteoclasticus B316] Length = 246 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 147/235 (62%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN HIIDL ++V + +A + + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIHIIDLQKSVVKVDEAYKAVFEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG ILFV TK QA D V A+R Y VN +WLGGM+TN+KT+ I +++ +E++ Sbjct: 61 AQQGGTILFVGTKKQAQDAVKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARMKAIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++++ KL+ L GIRDM +PD +FVVD +E++ IQEA L Sbjct: 121 QEDGTFDVLPKKEVAMLKKELAKLQANLGGIRDMKRIPDAIFVVDPKKERICIQEAESLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 I ++ + DTN +P+ +D++IPGNDD+ R++ L +A A I+ S AD Sbjct: 181 ITLIGIGDTNCDPEELDFIIPGNDDAIRAVKLIVGKMADAVIEANQGAESDAAAD 235 >gi|238019369|ref|ZP_04599795.1| hypothetical protein VEIDISOL_01233 [Veillonella dispar ATCC 17748] gi|237864068|gb|EEP65358.1| hypothetical protein VEIDISOL_01233 [Veillonella dispar ATCC 17748] Length = 237 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 97/237 (40%), Positives = 153/237 (64%), Gaps = 1/237 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDLS+TV +++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + + E A R+ + VN +WLGGM+TN+KT+ I++L+ LE + Sbjct: 61 ASQGEVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + + +KL++ L GI+DM +P +FVVD +EK+AI EA++L Sbjct: 121 AEDGTFEVLPKKEVIGLRHEMEKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP+VA VDTN +PD V++ IP NDD+ R++ L +A A ++G + + Sbjct: 181 IPVVATVDTNCDPDEVEFPIPANDDAIRAVKLLAGKMADAVLEGRQGESLDGAEAAE 237 >gi|168335179|ref|ZP_02693285.1| 30S ribosomal protein S2 [Epulopiscium sp. 'N.t. morphotype B'] Length = 255 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 102/261 (39%), Positives = 156/261 (59%), Gaps = 7/261 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T + +A + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTAKKMDEAFYAMKDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG++LFV TK QA D + A R Y +N +WLGGM+TN++T+ + +L+ LE + Sbjct: 61 AADGGKVLFVGTKKQAQDSIKAEALRCGMYYINHRWLGGMLTNFQTIRSRVDRLKKLELM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ KL+ L GI++M G+PD +F++D +E +AIQEA L Sbjct: 121 QEDGTFDLLPKKEVIELKKEMIKLENNLGGIKEMKGVPDAIFIIDPRKEAIAIQEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTN +PD +D+ IPGNDD+ R++ L +A A I+ S G + Sbjct: 181 IPVFSIVDTNCDPDEIDFPIPGNDDAIRAVKLITAKLADAIIE------SNQGEIFDAGD 234 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 E + E E+S S E Sbjct: 235 EPIQPVVEETLTFENSVSVEE 255 >gi|293364491|ref|ZP_06611216.1| 30S ribosomal protein S2 [Streptococcus oralis ATCC 35037] gi|291316999|gb|EFE57427.1| 30S ribosomal protein S2 [Streptococcus oralis ATCC 35037] Length = 286 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 28 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 87 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 88 AANDAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM 147 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 148 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 208 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAAVEAEFAAS 267 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 268 EAQADSIEEI 277 >gi|225874497|ref|YP_002755956.1| ribosomal protein S2 [Acidobacterium capsulatum ATCC 51196] gi|254764449|sp|C1F401|RS2_ACIC5 RecName: Full=30S ribosomal protein S2 gi|225791895|gb|ACO31985.1| ribosomal protein S2 [Acidobacterium capsulatum ATCC 51196] Length = 301 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 111/245 (45%), Positives = 164/245 (66%), Gaps = 1/245 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ W+P+M+ YIF ERN +IIDL +T+ M + A + ++D Sbjct: 1 MANITMKELLEAGVHFGHQTKRWDPRMKEYIFGERNGIYIIDLQKTLKMFKDASKYVTDM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G ILFV TK QA D + E A R Y +N++WLGG++TNW TV +S+++L++L+E+ Sbjct: 61 CAQGKVILFVGTKRQAQDAIAEEANRCGMYYINNRWLGGLLTNWVTVQKSVKRLQELDEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE + +ER+R L+ L GI++M LPD +FVVD+N E +A++EAR+L Sbjct: 121 ATDGRYDLLTKKEVIRLERERKHLQANLAGIKNMRRLPDAIFVVDSNNEAIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A + I+G+ A Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTSKIADSVIEGVQMVGDKQFAAEMEGV 240 Query: 242 ETVVH 246 T V Sbjct: 241 NTDVQ 245 >gi|227364826|ref|ZP_03848874.1| ribosomal protein S2 [Lactobacillus reuteri MM2-3] gi|227070170|gb|EEI08545.1| ribosomal protein S2 [Lactobacillus reuteri MM2-3] Length = 257 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 113/263 (42%), Positives = 168/263 (63%), Gaps = 8/263 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKME YIF ERN +IIDL +TV ++ A + D A G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMEEYIFTERNGIYIIDLQKTVKLIDTAYNYMKDVAANDG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 LFV TK QA D + E A R+ QY VN +WLGG +TNWKT+ I +L++L+++ + Sbjct: 61 VALFVGTKKQAQDAIEEEATRAGQYYVNHRWLGGTLTNWKTIQSRIARLKELKKMSEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + ++R+KL+R L GI DM +PD+MF+VD ++E++A++EA++L IPIVA Sbjct: 121 FDVLPKKEVAVLTKQREKLERFLGGIEDMPRIPDVMFIVDPHKEQIAVKEAQKLHIPIVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTN++PD +DYVIP NDD+ R++ L +A A ++G Q + ET Sbjct: 181 MVDTNTDPDDIDYVIPSNDDAIRAVRLITSKMADAFVEGKQGQDD-------AQQETADD 233 Query: 247 SKEGMQLEEDSQSSESSVLDGQE 269 + + EDS + + ++G+E Sbjct: 234 NAANETVSEDSLKNLKNSVEGKE 256 >gi|226313035|ref|YP_002772929.1| 30S ribosomal protein S2 [Brevibacillus brevis NBRC 100599] gi|254764460|sp|C0ZF66|RS2_BREBN RecName: Full=30S ribosomal protein S2 gi|226095983|dbj|BAH44425.1| 30S ribosomal protein S2 [Brevibacillus brevis NBRC 100599] Length = 236 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 100/232 (43%), Positives = 150/232 (64%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK QA + V E A+R+ Y +N +WLGG +TN+ T+ + +L +L+ + Sbjct: 61 AQDGGKILFVGTKKQAQESVKEEAERTGHYFINQRWLGGTLTNFTTIKKRTARLAELKRM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + + ++ D+L++ L GI M LPD +FV+D +E++A+ EAR+L Sbjct: 121 ENDGTFAVLPKKEVIVLRKEMDRLEKFLGGIAHMDKLPDALFVIDPRKERIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADALLEGNQGTEQQA 232 >gi|85859430|ref|YP_461632.1| ribosomal protein S2 [Syntrophus aciditrophicus SB] gi|123725263|sp|Q2LTQ7|RS2_SYNAS RecName: Full=30S ribosomal protein S2 gi|85722521|gb|ABC77464.1| ribosomal protein S2 [Syntrophus aciditrophicus SB] Length = 277 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 171/273 (62%), Gaps = 6/273 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF RNN +IIDL QTV + Q A + DT Sbjct: 1 MAIISMKQLLEAGVHFGHQTNKWNPKMKPYIFGARNNIYIIDLQQTVGLFQNAYNFVIDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ GG I+F+ TK Q+ D + + A R VN +WLGGM+TN+ T+ + I +L L+++ Sbjct: 61 VSEGGEIMFIGTKKQSQDSIHDEATRCGMPYVNQRWLGGMLTNFVTIKKRIDRLNYLDQI 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + F KKE + ++++R+KL + L GI+ M LP +F+VD RE +A+ EA++LR Sbjct: 121 FEDDSVRAFPKKEIMGLQKEREKLVKVLGGIQKMKSLPAALFIVDPKRETIAVNEAKKLR 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A+VDTN +P+ +DY+IPGNDD+ R+I LF A A +G R + A+T Sbjct: 181 IPIIAIVDTNCDPENIDYIIPGNDDAIRAIKLFSSKFADAVTEGKRRYEERLQAETDKDA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 E+ +Q EE+ ++ ++ +E Sbjct: 241 ESST-----VQQEENPEADIPESIETKESVSAA 268 >gi|119505666|ref|ZP_01627736.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2080] gi|119458478|gb|EAW39583.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2080] Length = 258 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 113/263 (42%), Positives = 162/263 (61%), Gaps = 6/263 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R LL++G FGH+ WNPKM++YIF RN HII+L TVP AL+ + Sbjct: 1 MAQVSMRDLLQAGAHFGHQTRFWNPKMDQYIFGARNKIHIINLEHTVPAFNDALKQVQRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + I+FV TK A + E A R V+ +WLGGM+TN+KTV SI++LR+LEE Sbjct: 61 ASNKSNIMFVGTKRAAGKVIEEQAARCGMPFVSHRWLGGMLTNYKTVRSSIKRLRELEEQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R ++KL R++ GI+DM GLPD++FV+D + E++AI EA +L Sbjct: 121 EADGTFAKLTKKEALMRTRSKEKLDRSVGGIKDMTGLPDVLFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNSNPD +DYVIPGNDD+ R+I L+ VA A ++G A + + + Sbjct: 181 IPVIGIVDTNSNPDGIDYVIPGNDDAIRAIRLYVKAVADAVLEGKAERG-----EVPAVA 235 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 E +V +E D SE+ Sbjct: 236 EDLVEVEEAPTDATDEAESEAEA 258 >gi|153810141|ref|ZP_01962809.1| hypothetical protein RUMOBE_00522 [Ruminococcus obeum ATCC 29174] gi|149833320|gb|EDM88401.1| hypothetical protein RUMOBE_00522 [Ruminococcus obeum ATCC 29174] Length = 256 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 98/224 (43%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D Sbjct: 15 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADI 74 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D + A+R Q+ VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 75 VANGGNILFVGTKKQAQDAIKAEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKQIEAM 134 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++ KL++ L GI++M LPD +F+VD +E++ +QEA L Sbjct: 135 EADGTFEVLPKKEVIELRKELAKLQKNLGGIKEMKRLPDAIFIVDPKKERICVQEAHTLG 194 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 195 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 238 >gi|226327055|ref|ZP_03802573.1| hypothetical protein PROPEN_00916 [Proteus penneri ATCC 35198] gi|225204273|gb|EEG86627.1| hypothetical protein PROPEN_00916 [Proteus penneri ATCC 35198] Length = 242 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 159/242 (65%), Gaps = 2/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTV-PMLQKALQVISD 61 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TV PM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVVPMFNEALVELNK 60 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 +R G+ILFV TK A + V EAA+ Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 IASRKGKILFVGTKRSAVEAVKEAAESCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLES 120 Query: 122 L-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 QSQDGTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTNS+PD +D++IPGNDD+ R++ L+ A+A +G ++ + + Sbjct: 181 GIPVFAIVDTNSDPDGIDFIIPGNDDAIRAVKLYLTAAATAVREGRSQDLAVQAEEGLVE 240 Query: 241 GE 242 E Sbjct: 241 AE 242 >gi|107103170|ref|ZP_01367088.1| hypothetical protein PaerPA_01004239 [Pseudomonas aeruginosa PACS2] Length = 246 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 115/249 (46%), Positives = 161/249 (64%), Gaps = 4/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNP+M ++IF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPEMGKFIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LRDLE Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ + +A A I G +Q + AD + Sbjct: 181 IPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRG--KQGAATSAD-EFVE 237 Query: 242 ETVVHSKEG 250 E S EG Sbjct: 238 EAPAESAEG 246 >gi|195977283|ref|YP_002122527.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195973988|gb|ACG61514.1| 30S ribosomal protein S2 [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 251 Score = 318 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 99/251 (39%), Positives = 164/251 (65%), Gaps = 1/251 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D A Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAANDA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 VILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRMEEEGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L IP+VA Sbjct: 121 FEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + E++ Sbjct: 181 MVDTNADPDDIDVIIPANDDAIRAVKLITAKLADAVIEGRQGEDAEVAFEADTQAESIEE 240 Query: 247 SKEGMQLEEDS 257 E ++ ++ Sbjct: 241 IVEVVEGSNEA 251 >gi|268607901|ref|ZP_06141632.1| 30S ribosomal protein S2 [Ruminococcus flavefaciens FD-1] Length = 251 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L+ A + D Sbjct: 1 MGVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLEDAYMFVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG +LFV TK QA D V E A R+ + VN++WLGGM+TN+KT+ I++L L + Sbjct: 61 AAQGGEVLFVGTKKQAGDSVKEEATRAGAHYVNARWLGGMLTNFKTIQTRIKRLEQLHTM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + + +KL++ L GI++M LP +F+VD +EK+A+ EA++L Sbjct: 121 EEDGTFALLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPAALFIVDPRKEKIAVAEAKKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G Sbjct: 181 IPIVAIVDTNCDPDEVDYVIPGNDDAIRAVKLIAGTIANAVIEGRQ 226 >gi|315641206|ref|ZP_07896283.1| 30S ribosomal protein S2 [Enterococcus italicus DSM 15952] gi|315482973|gb|EFU73492.1| 30S ribosomal protein S2 [Enterococcus italicus DSM 15952] Length = 277 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 106/262 (40%), Positives = 169/262 (64%), Gaps = 3/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 16 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKAV 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ Sbjct: 76 AEDGGIALFVGTKKQAQEAIKDEAIRSGQYYVNHRWLGGTLTNWETIQKRVSRLKQINKM 135 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + I+++R++L++ L GI DM +PD+M++VD +E++A+QEA++L Sbjct: 136 EEDGTFEVLPKKEVVGIKKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAQKLN 195 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G + + D + Sbjct: 196 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQGEDQVVEEDFVAES 255 Query: 242 ETVVHSKEGM--QLEEDSQSSE 261 E S E + +E D++S+E Sbjct: 256 EGEATSIEEIVDVVEGDNESAE 277 >gi|291524871|emb|CBK90458.1| SSU ribosomal protein S2P [Eubacterium rectale DSM 17629] gi|291529012|emb|CBK94598.1| SSU ribosomal protein S2P [Eubacterium rectale M104/1] Length = 244 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 96/226 (42%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A +SD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYDAVSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG ILFV TK QA D + A+R Y VN +WLGGM+TN++T+ I +L+ +E + Sbjct: 61 AAQGGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFRTIESRIARLKAIETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI+DM +PD +FVVD +E++ I+EA+ L Sbjct: 121 SEDGTFDVLPKKEVIALKKEWEKLEKNLGGIKDMKRIPDAIFVVDPKKERICIKEAQALG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ + DTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 ITLIGIADTNCDPDELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQ 226 >gi|209574093|sp|Q31G43|RS2_THICR RecName: Full=30S ribosomal protein S2 Length = 244 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 113/249 (45%), Positives = 159/249 (63%), Gaps = 6/249 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+PM AL + Sbjct: 1 MAKVTMRQMLEAGVHFGHQTRYWNPKMGEYIFGARNKIHIVNLEKTLPMFNDALNFLGGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A+ G +LFV TK A D V + AKR VN +WLGGM+TN+KT+ QSI+ L+DLE + Sbjct: 61 AAKKGTVLFVGTKRAAGDLVAQEAKRCGMPYVNHRWLGGMLTNFKTIKQSIKNLKDLEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R++ KL+ +L GI+DM +PD +F++DT EK+AIQEA+ L Sbjct: 121 EQDGTFEKITKKEALMRSRQKAKLELSLGGIKDMRAMPDAIFIIDTGNEKIAIQEAKNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTN++P+ VDYVIPGNDD+ R+++L+ A A +G + + D Sbjct: 181 IPVVGVVDTNNDPNGVDYVIPGNDDAVRAVSLYLSAAADAINEGKGSITTAVEGD----- 235 Query: 242 ETVVHSKEG 250 E V E Sbjct: 236 EFVEEKAEA 244 >gi|284050348|ref|ZP_06380558.1| 30S ribosomal protein S2 [Arthrospira platensis str. Paraca] Length = 265 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 94/224 (41%), Positives = 133/224 (59%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LESGV FGH+ WNP+M YIF ERN HIIDL QT ++ A + Sbjct: 1 MPVISLADMLESGVHFGHQTRRWNPRMAPYIFTERNGVHIIDLVQTAQLMDDAYDYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ + +L+DLE Sbjct: 61 SEEGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWVTIKTRVDRLKDLEAR 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE + R+ KL++ L G++ M +PD + +VD RE A+ E R+L Sbjct: 121 ENSGQLDYLPKKEAAVLRREMGKLQKYLGGLKGMRRVPDAVIMVDQRREYNAVMECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI+A++DTN +PDL D IP NDD+ R+I L +A +G Sbjct: 181 IPIIALLDTNCDPDLADIHIPANDDAIRAIKLIIGKLADGIYEG 224 >gi|222151089|ref|YP_002560243.1| 30S ribosomal protein S2 [Macrococcus caseolyticus JCSC5402] gi|254764482|sp|B9EBD6|RS2_MACCJ RecName: Full=30S ribosomal protein S2 gi|222120212|dbj|BAH17547.1| 30S ribosomal protein S2 [Macrococcus caseolyticus JCSC5402] Length = 255 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 164/258 (63%), Gaps = 4/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG +LFV TK QA + + E A+R+ Q+ +N +WLGG +TN+KT+S+ ++++ ++E++ Sbjct: 61 SEEGGTVLFVGTKKQAQEAIKEEAERAGQFFINERWLGGTLTNYKTISKRVKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ D+ + L GIR+M +P +FVVD +E+ AI EA++L Sbjct: 121 EEDGTFDVLPKKEVVELKKEYDRWVKFLGGIREMKSMPSALFVVDPRKERNAIAEAKKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +PIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G + + + Sbjct: 181 VPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEG---RQGVSNEEVAAEQ 237 Query: 242 ETVVHSKEGMQLEEDSQS 259 + + ++ EE +++ Sbjct: 238 NIDLSEETEVKAEETTEA 255 >gi|291571517|dbj|BAI93789.1| 30S ribosomal protein S2 [Arthrospira platensis NIES-39] Length = 265 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 94/225 (41%), Positives = 133/225 (59%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LESGV FGH+ WNP+M YIF ERN HIIDL QT ++ A + Sbjct: 1 MPVISLADMLESGVHFGHQTRRWNPRMAPYIFTERNGVHIIDLVQTAQLMDDAYDYVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + LFV TK QA+ + + A R Y VN +WLGGM+TNW T+ + +L+DLE Sbjct: 61 SEEGKKFLFVGTKRQAAGIIAQEAARCGGYYVNQRWLGGMLTNWVTIKTRVDRLKDLEAR 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE + R+ KL++ L G++ M +PD + +VD RE A+ E R+L Sbjct: 121 ENSGQLDYLPKKEAAVLRREMGKLQKYLGGLKGMRRVPDAVIMVDQRREYNAVMECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPI+A++DTN +PDL D IP NDD+ R+I L +A +G Sbjct: 181 IPIIALLDTNCDPDLADIHIPANDDAIRAIKLIIGKLADGIYEGR 225 >gi|209573707|sp|B1MZ65|RS2_LEUCK RecName: Full=30S ribosomal protein S2 Length = 258 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 107/255 (41%), Positives = 162/255 (63%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A + + Sbjct: 1 MAVISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFMRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 61 STDGANFLFVGTKKQASDAIAEEAARAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L Sbjct: 121 AEDGTFEQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S + Sbjct: 181 IPVVAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDSAPEDAFVAGD 240 Query: 242 ETVVHSKEGMQLEED 256 E +E + E+ Sbjct: 241 ENTESIEEIANIVEE 255 >gi|85059921|ref|YP_455623.1| 30S ribosomal protein S2 [Sodalis glossinidius str. 'morsitans'] gi|123766400|sp|Q2NRK7|RS2_SODGM RecName: Full=30S ribosomal protein S2 gi|84780441|dbj|BAE75218.1| 30S ribosomal protein S2 [Sodalis glossinidius str. 'morsitans'] Length = 241 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 159/241 (65%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVP+ AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPLFNDALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D E +AI EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDAEHEHIAINEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD++IPGNDD+ R+I L+ VA+ G ++ + ++ Sbjct: 181 IPVFAIVDTNSDPDGVDFIIPGNDDAIRAINLYLTAVATTVRKGRSQDLAEQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|323489576|ref|ZP_08094803.1| 30S ribosomal protein S2 [Planococcus donghaensis MPA1U2] gi|323396707|gb|EGA89526.1| 30S ribosomal protein S2 [Planococcus donghaensis MPA1U2] Length = 238 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 99/238 (41%), Positives = 155/238 (65%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVRKLEEAYSFMKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA D + E A+RS Y +N +WLGG +TN+ T+ + + +L+ +E + Sbjct: 61 GEEGGKVLFVGTKKQAQDAIKEEAERSGNYYINQRWLGGTLTNFGTIQKRVNRLKQIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EA +L Sbjct: 121 EEDGTFEVLPKKEVVQLKKQHERLVKFLGGIRDMSSLPDVMFVVDPRKERIAVAEAMKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + A++ Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADALLESKPEEDEETQAESAE 238 >gi|260424723|ref|ZP_05733065.2| ribosomal protein S2 [Dialister invisus DSM 15470] gi|260402954|gb|EEW96501.1| ribosomal protein S2 [Dialister invisus DSM 15470] Length = 246 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 99/227 (43%), Positives = 154/227 (67%), Gaps = 1/227 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV +++A I + A G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVEEAYAFIREVAATGA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + V E A+R + VN +WLGGM+TN++T+ + +L++LE++ + Sbjct: 61 PILFVGTKKQAQNSVREEAQRCNMFYVNERWLGGMLTNFRTIQARVARLKELEKMFEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + + KKE + ++R+ +KL++ L GI+DM +P +FV+D+ +E++A+ EA +L IP+VA Sbjct: 121 TEQYPKKEVILMQRELEKLQKNLGGIKDMKKIPGAIFVIDSKKEEIAVAEAHKLHIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 VDTN +PD+VD+ IP NDD+ R++ L +A A ++G Q + Sbjct: 181 TVDTNCDPDVVDFPIPANDDAIRAVRLLASKMADAILEGRQGQQEEV 227 >gi|167770591|ref|ZP_02442644.1| hypothetical protein ANACOL_01937 [Anaerotruncus colihominis DSM 17241] gi|167667186|gb|EDS11316.1| hypothetical protein ANACOL_01937 [Anaerotruncus colihominis DSM 17241] Length = 249 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 108/226 (47%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV L +A + D Sbjct: 1 MGVVSMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKLDEAYMFVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D V + A R+ Y VN++WLGGM+TN+KT+ + I +L L ++ Sbjct: 61 AANGGNLLFVGTKKQAGDSVRDEATRAGAYYVNARWLGGMLTNFKTIRRRIDRLAQLRKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +KL++ L GI+DM LP +FVVD +EK+A+ EAR+L Sbjct: 121 QEDGTFDLLPKKEVSKLNLEIEKLEKFLGGIKDMKKLPSALFVVDPRKEKIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLSATMADALIEGRQ 226 >gi|257869597|ref|ZP_05649250.1| ribosomal protein S2 [Enterococcus gallinarum EG2] gi|257803761|gb|EEV32583.1| ribosomal protein S2 [Enterococcus gallinarum EG2] Length = 262 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 108/262 (41%), Positives = 166/262 (63%), Gaps = 3/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + E A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ Sbjct: 61 AEEGGVALFVGTKKQAQEAIKEEAIRSGQYYVNHRWLGGTLTNWETIQKRVARLKQINKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++R++L++ L GI DM +PD+M+VVD +E++AIQEAR+L Sbjct: 121 EEDGTFDVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAIQEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G + + D + Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQGEDQVVEEDFSAES 240 Query: 242 ETVVHSKEGM--QLEEDSQSSE 261 S E + +E D+ S+E Sbjct: 241 TENATSIEEIVDVVEGDNVSAE 262 >gi|320120341|gb|EFE28420.2| 30S ribosomal protein S2 [Filifactor alocis ATCC 35896] Length = 252 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++RQLLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + +S A Sbjct: 5 VSMRQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLQKTVKKIEEAYEFVSTVAAE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G ILFV TK QA D + E A+R Y VN +WLGGM+TN+KT+ I +LR+LE + + Sbjct: 65 GKPILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNYKTIRTRIDRLRELEAMQED 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + + ++ KL + LDGI+DM LP +F+VD +E++AI+EA+ L IP+ Sbjct: 125 GTFDLLPKKEVMQLLHEKSKLVKYLDGIKDMPELPGAIFIVDPRKERIAIKEAQNLGIPL 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 + ++DTN +PD +DY IPGNDD+ R++ L +++ A I+ + + Sbjct: 185 IGIIDTNCDPDEIDYPIPGNDDAIRAVKLITSVISQAVIEAKQGEMN 231 >gi|154482596|ref|ZP_02025044.1| hypothetical protein EUBVEN_00263 [Eubacterium ventriosum ATCC 27560] gi|149736621|gb|EDM52507.1| hypothetical protein EUBVEN_00263 [Eubacterium ventriosum ATCC 27560] Length = 268 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 101/224 (45%), Positives = 151/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD Sbjct: 27 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAVSDI 86 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + V A+R Y VN +WLGGM+TN+KT+ I++L+D+E++ Sbjct: 87 AAEGGTILFVGTKKQAQEAVQTEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKDIEKM 146 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +NI+++ DKL++ L GI+DM +PD +FVVD +EK+ +QEA L Sbjct: 147 AEDGTFDVLPKKEVVNIKKEWDKLEKNLGGIKDMKRIPDAIFVVDPKKEKICVQEAHSLG 206 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 207 ITLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 250 >gi|113461231|ref|YP_719300.1| 30S ribosomal protein S2 [Haemophilus somnus 129PT] gi|170717230|ref|YP_001784349.1| 30S ribosomal protein S2 [Haemophilus somnus 2336] gi|122945346|sp|Q0I458|RS2_HAES1 RecName: Full=30S ribosomal protein S2 gi|189044941|sp|B0UTA0|RS2_HAES2 RecName: Full=30S ribosomal protein S2 gi|112823274|gb|ABI25363.1| SSU ribosomal protein S2P [Haemophilus somnus 129PT] gi|168825359|gb|ACA30730.1| ribosomal protein S2 [Haemophilus somnus 2336] Length = 239 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 116/241 (48%), Positives = 160/241 (66%), Gaps = 3/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNEALVELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GRILFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGRILFVGTKRAASEVVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALVRTREMEKLELSLGGIKDMGGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD+SR+I L+ +A +G R + + +A Sbjct: 181 IPVFAIVDTNSSPDGVDFVIPGNDDASRAIQLYLSAATTAVKEG--RNQETVTEEVFAAA 238 Query: 242 E 242 E Sbjct: 239 E 239 >gi|317132577|ref|YP_004091891.1| ribosomal protein S2 [Ethanoligenens harbinense YUAN-3] gi|315470556|gb|ADU27160.1| ribosomal protein S2 [Ethanoligenens harbinense YUAN-3] Length = 246 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 104/230 (45%), Positives = 155/230 (67%), Gaps = 2/230 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA T++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A + Sbjct: 1 MA-SVVTMKQLLEAGVHFGHQTRRWNPKMTPYIFTERNGIYIIDLQKTVRKLEEAYNFVR 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 G ILFV TK QA D + E A+R+ Y VN++WLGGM+TN++T+ + I +L L Sbjct: 60 KLSEGGNTILFVGTKKQAQDSIREEAERAGAYFVNARWLGGMLTNFRTIRRRIDRLAQLR 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + + KKE + ++ + +KL++ L GI+DM LP +F+VD +E++A+ EAR+ Sbjct: 120 KMEEDGTFELLPKKEVVKLKLEIEKLEKYLGGIKDMKKLPAALFIVDPRKERIAVSEARK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 L IPIVA+VDTN +PD +DYVIPGNDD+ R++ L ++A+A ++G + Sbjct: 180 LGIPIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLISSVMANALLEGKQGE 229 >gi|325262880|ref|ZP_08129616.1| ribosomal protein S2 [Clostridium sp. D5] gi|324031974|gb|EGB93253.1| ribosomal protein S2 [Clostridium sp. D5] Length = 252 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 94/224 (41%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A Q ++D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYQAVADI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + ++R + VN +WLGGM+TN+KT+ +Q+L+D+E + Sbjct: 61 AAEGGTILFVGTKKQAQDAIKTESERCGMFYVNERWLGGMLTNFKTIQSRVQRLKDIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ KL++ L GI++M +PD +F+VD +E++ +QEA L Sbjct: 121 SEDGTFDVLPKKEVIELKKEWAKLEKNLGGIKEMKRIPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGICDTNCDPEELDFVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|322388456|ref|ZP_08062059.1| 30S ribosomal protein S2 [Streptococcus infantis ATCC 700779] gi|321140769|gb|EFX36271.1| 30S ribosomal protein S2 [Streptococcus infantis ATCC 700779] Length = 287 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 162/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 28 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 87 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 88 AANDAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM 147 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 148 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + A Sbjct: 208 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAAVEAEFAA 267 Query: 242 --------ETVVHSKEG 250 E +V EG Sbjct: 268 SEAQADSIEEIVEVVEG 284 >gi|325126009|gb|ADY85339.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 253 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 147/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ W+PKM+ YIF +RN+ +IIDL +T+ ML A + Sbjct: 1 MSVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNDIYIIDLQKTIKMLDDAYNYVKAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ +++L+DL+++ Sbjct: 61 AQDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ DKL++ L GI DM +PD+MFVVD +EK+A+ EA +L Sbjct: 121 AEDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN++P +D +IP NDD+ R+I L +A A I+G Sbjct: 181 IPVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGTMADAVIEGKQ 226 >gi|15674135|ref|NP_268310.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. lactis Il1403] gi|13878746|sp|Q9CDR4|RS2_LACLA RecName: Full=30S ribosomal protein S2 gi|12725213|gb|AAK06251.1|AE006444_2 30S ribosomal protein S2 [Lactococcus lactis subsp. lactis Il1403] Length = 255 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 94/231 (40%), Positives = 154/231 (66%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN H+IDL +TV ++ A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIHVIDLQKTVKLVDDAYNYVKNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA++ V E A R+ QY VN +WLGGM+TNW T+ + +L+++ ++ Sbjct: 61 SQEGAVVLFVGTKKQAAEAVKEEALRAGQYYVNHRWLGGMLTNWNTIQTRVTRLKEINKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++R++L++ + GI DM +PD+M++VD + E++A++EA+ L Sbjct: 121 EEEGTFEVLPKKEVVLLNKERERLEKFIGGIADMPRIPDVMYIVDPHAEQIAVKEAKTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+VA+VDTN++P+ +D VIP NDD+ R++ L +A A I+G + + Sbjct: 181 IPVVAMVDTNADPEPIDVVIPANDDAIRAVKLITAKMADAIIEGRQGEDAA 231 >gi|294503061|ref|YP_003567123.1| 30S ribosomal protein S2 [Yersinia pestis Z176003] gi|294353520|gb|ADE63861.1| 30S ribosomal protein S2 [Yersinia pestis Z176003] Length = 236 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 113/236 (47%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ + Sbjct: 121 FDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGRSQDLAVQAEESFVEAE 236 >gi|295100710|emb|CBK98255.1| SSU ribosomal protein S2P [Faecalibacterium prausnitzii L2-6] Length = 240 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 151/230 (65%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I ++ L+ + Sbjct: 61 AAEGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMAQLQNM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L Sbjct: 121 KDNGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 230 >gi|149921519|ref|ZP_01909970.1| ribosomal protein S2 [Plesiocystis pacifica SIR-1] gi|149817594|gb|EDM77062.1| ribosomal protein S2 [Plesiocystis pacifica SIR-1] Length = 301 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 125/278 (44%), Positives = 168/278 (60%), Gaps = 8/278 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQLLE+GV FGHR WNPKM YIF RN HIIDL QT ++++A I A Sbjct: 20 ITVRQLLEAGVHFGHRTERWNPKMRTYIFGARNGVHIIDLQQTATLMRRAYAYIRSVAAE 79 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G ILFV TK QA D ++ A+R Q+ V ++WLGG +TNWKT+ QS+ KLR +E++ + Sbjct: 80 GQPILFVGTKRQAQDVLISEAQRCGQFFVVARWLGGTLTNWKTIRQSVDKLRHIEKMSED 139 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L ER R KL+R L GI+DM LP +FV+D NRE +A+ EA RL +P+ Sbjct: 140 GTYEKLTKKEVLQFERSRAKLERNLGGIKDMPKLPGAIFVIDPNREHIAVSEANRLGVPV 199 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID----GIARQHSYMGADTKSA 240 VA+ DTN++P + Y+IPGNDD+ RSI L +A AA + G R + D A Sbjct: 200 VALADTNADPSKIQYIIPGNDDAIRSIKLITSRIADAAAEGNKLGKQRAVDHGDGDNAPA 259 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 V +G ++E S+ ++ L E A PE S Sbjct: 260 PIRVTTGGDGPKVELVSRRTQ---LPTPEAAATPETES 294 >gi|331083047|ref|ZP_08332165.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 6_1_63FAA] gi|330405448|gb|EGG84982.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 6_1_63FAA] Length = 246 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 152/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + I+D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAIADI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 61 AAEGGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +N++++ +KL++ L GI++M LPD +F+VD +E++ +QEA L Sbjct: 121 EADGTFDVLPKKEVINLKKELEKLQKNLGGIKEMKKLPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + + Sbjct: 181 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQGEAADA 232 >gi|166367234|ref|YP_001659507.1| 30S ribosomal protein S2 [Microcystis aeruginosa NIES-843] gi|189044944|sp|B0JTL2|RS2_MICAN RecName: Full=30S ribosomal protein S2 gi|166089607|dbj|BAG04315.1| 30S ribosomal protein S2 [Microcystis aeruginosa NIES-843] Length = 265 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 104/249 (41%), Positives = 154/249 (61%), Gaps = 1/249 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM +YI+ RN HIIDL QT ++++A + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLIEEAYEFVRGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RG R LF+ TK QA+ + + A RS + VN +WLGGM+TNW+T+ +++L++LEEL Sbjct: 61 ADRGKRFLFIGTKRQAAAIIKQEALRSGSHFVNQRWLGGMLTNWETIRGRVERLKELEEL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI+ M LPDL+ VVD RE AIQE ++L Sbjct: 121 ENSGALDKRPKKEASVLRRELGKLEKYLGGIKTMRRLPDLVVVVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI++++DTN +PDLVD IP NDD+ RS+ L ++ A I+G + + + Sbjct: 181 IPIISLLDTNCDPDLVDVPIPANDDAIRSVKLILGKISDAIIEGRRGGQAAVEEYEEDYD 240 Query: 242 ETVVHSKEG 250 + +EG Sbjct: 241 NETEYEEEG 249 >gi|126699757|ref|YP_001088654.1| 30S ribosomal protein S2 [Clostridium difficile 630] gi|254975736|ref|ZP_05272208.1| 30S ribosomal protein S2 [Clostridium difficile QCD-66c26] gi|255093123|ref|ZP_05322601.1| 30S ribosomal protein S2 [Clostridium difficile CIP 107932] gi|255101276|ref|ZP_05330253.1| 30S ribosomal protein S2 [Clostridium difficile QCD-63q42] gi|255307152|ref|ZP_05351323.1| 30S ribosomal protein S2 [Clostridium difficile ATCC 43255] gi|255314865|ref|ZP_05356448.1| 30S ribosomal protein S2 [Clostridium difficile QCD-76w55] gi|255517539|ref|ZP_05385215.1| 30S ribosomal protein S2 [Clostridium difficile QCD-97b34] gi|255650650|ref|ZP_05397552.1| 30S ribosomal protein S2 [Clostridium difficile QCD-37x79] gi|255656128|ref|ZP_05401537.1| 30S ribosomal protein S2 [Clostridium difficile QCD-23m63] gi|260683740|ref|YP_003215025.1| 30S ribosomal protein S2 [Clostridium difficile CD196] gi|260687400|ref|YP_003218534.1| 30S ribosomal protein S2 [Clostridium difficile R20291] gi|296450440|ref|ZP_06892196.1| 30S ribosomal protein S2 [Clostridium difficile NAP08] gi|296879437|ref|ZP_06903431.1| 30S ribosomal protein S2 [Clostridium difficile NAP07] gi|306520577|ref|ZP_07406924.1| 30S ribosomal protein S2 [Clostridium difficile QCD-32g58] gi|123066750|sp|Q185S8|RS2_CLOD6 RecName: Full=30S ribosomal protein S2 gi|115251194|emb|CAJ69025.1| 30S ribosomal protein S2 [Clostridium difficile] gi|260209903|emb|CBA63844.1| 30S ribosomal protein S2 [Clostridium difficile CD196] gi|260213417|emb|CBE05066.1| 30S ribosomal protein S2 [Clostridium difficile R20291] gi|296260701|gb|EFH07540.1| 30S ribosomal protein S2 [Clostridium difficile NAP08] gi|296429583|gb|EFH15436.1| 30S ribosomal protein S2 [Clostridium difficile NAP07] Length = 237 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 104/237 (43%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVEEAYKFTKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA D + + A+R Y VN +WLGGM+TN KT+ I KLR+LE++ Sbjct: 61 AETGKPILFVGTKKQAQDAIKDEAERCGMYFVNERWLGGMLTNHKTIKTRINKLRELEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++KL++ L GI+DM LP MFVVD +E +AIQEA RL Sbjct: 121 EEEGVFNVLPKKEVIKLRAEKEKLEKYLGGIKDMPELPGAMFVVDPRKENIAIQEAHRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP+V +VDTN +P+ +D+ IPGNDD+ R++ L +A+A I+G + D + Sbjct: 181 IPVVGIVDTNCDPEQLDFAIPGNDDAIRAVKLITGAMATAVIEGRQGAEEEVAEDQE 237 >gi|284008520|emb|CBA75043.1| 30S ribosomal protein S2 [Arsenophonus nasoniae] Length = 241 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ YIF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKTYIFGVRNKVHIINLEKTVPMFNEALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ + EAA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAIKEAANGCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELSKLENSLGGIKEMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VDY+IPGNDD+ R++ L+ D VA A +G ++ + + Sbjct: 181 IPVFAIVDTNSDPDGVDYIIPGNDDAIRAVKLYLDAVAKAVHEGRSQDQAIKPEENMIET 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|212639535|ref|YP_002316055.1| 30S ribosomal protein S2 [Anoxybacillus flavithermus WK1] gi|226695071|sp|B7GG89|RS2_ANOFW RecName: Full=30S ribosomal protein S2 gi|212561015|gb|ACJ34070.1| Ribosomal protein S2 [Anoxybacillus flavithermus WK1] Length = 235 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 160/235 (68%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D V E A+RS + VN +WLGG +TN+ T+ + I++L+++E + Sbjct: 61 AADGGKILFVGTKKQAQDSVKEEAERSGMFYVNQRWLGGTLTNFATIQKRIKRLKEIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ ++L++ L GI++M LPD +FV+D +E++A+ EAR+L Sbjct: 121 AEDGTFDVLPKKEVVKLKKELERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAILEAKQGEEAVVTAE 235 >gi|307702781|ref|ZP_07639731.1| ribosomal protein S2 [Streptococcus oralis ATCC 35037] gi|322375192|ref|ZP_08049706.1| ribosomal protein S2 [Streptococcus sp. C300] gi|331267312|ref|YP_004326942.1| 30S ribosomal protein S2 [Streptococcus oralis Uo5] gi|307623637|gb|EFO02624.1| ribosomal protein S2 [Streptococcus oralis ATCC 35037] gi|321280692|gb|EFX57731.1| ribosomal protein S2 [Streptococcus sp. C300] gi|326683984|emb|CBZ01602.1| 30S ribosomal protein S2 [Streptococcus oralis Uo5] Length = 259 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 241 EAQADSIEEI 250 >gi|315655033|ref|ZP_07907937.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 51333] gi|315490689|gb|EFU80310.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 51333] Length = 281 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 110/278 (39%), Positives = 169/278 (60%), Gaps = 2/278 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I +R+ +I+DL QT+ + A + + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTDRSGIYILDLQQTIADIDIAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTLLFVGTKKQAQESIQEQATRVGMPFVNERWLGGMLTNFSTVHKRLQRLKELEQY 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL + L GIRDM P ++VVDT +E LAI EA++L Sbjct: 121 DFEDTSASGLTKKELLMMCREKDKLAKTLGGIRDMAKTPSAIWVVDTKKEHLAIAEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ R++ L ++A A +G+ + + + Sbjct: 181 GIPVVAILDTNCDPDEVDYGIPGNDDAIRAVDLLTKVIADACAEGLLARSKKQLGENPES 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E + + + +D+++ + A + Sbjct: 241 AEPMAEWERELLAGDDAKAPAAEKPAETAPAASEATDA 278 >gi|226945941|ref|YP_002801014.1| 30S ribosomal protein S2 [Azotobacter vinelandii DJ] gi|259494989|sp|C1DSU6|RS2_AZOVD RecName: Full=30S ribosomal protein S2 gi|226720868|gb|ACO80039.1| 30S ribosomal protein S2 [Azotobacter vinelandii DJ] Length = 246 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 156/235 (66%), Gaps = 3/235 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R +L++G FGH+ WNPKM RYIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVTMRDMLKAGCHFGHQTRYWNPKMGRYIFGARNKIHIINLEKTLPMFNEALSFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R + V+ +WLGGM+TN+KT+ SI++LR+LE Sbjct: 61 AAGKNKILFVGTKRSAGRLVREEAARCSMPYVDHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R+L GI+DMGGLPD MFV+D + E++AI EA +L Sbjct: 121 SQDGTFAKLTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ VVDTNS+P+ VDY+IPGNDD+ R++ L+ VA A + G RQ++ G + Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAVQLYLGSVADAVLRG--RQNAGTGDE 233 >gi|300813723|ref|ZP_07094043.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512180|gb|EFK39360.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 274 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 95/254 (37%), Positives = 160/254 (62%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKKIEEAYDFAREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 A GG+ILFV TK QA D + + AK+ +N +WLGG++TN+KT+ + I +L + +E Sbjct: 61 SANGGKILFVGTKKQAQDAIEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLFKLIEM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +R++L++ L GI+DM +PD +++VD +EK+A++EA L Sbjct: 121 EDDGTFDVLPKKEVIQLIHERERLEKFLGGIKDMDKMPDALYIVDPKKEKIAVKEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +PD +D+ IPGNDD+ R++ L + +A+A ++G + + D ++ Sbjct: 181 IPVIGIVDTNCDPDELDFPIPGNDDAIRAVKLITETIANAVLEGKQGTQNVVEDDEENLD 240 Query: 242 ETVVHSKEGMQLEE 255 E + +EE Sbjct: 241 TEENVPSEEVNIEE 254 >gi|158520491|ref|YP_001528361.1| ribosomal protein S2 [Desulfococcus oleovorans Hxd3] gi|158509317|gb|ABW66284.1| ribosomal protein S2 [Desulfococcus oleovorans Hxd3] Length = 304 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 117/280 (41%), Positives = 169/280 (60%), Gaps = 6/280 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLESGV FGH+ WNPKM+ YIF RN +IIDL +TV M + A I Sbjct: 1 MSYITMKELLESGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVRMFKDAYDFIGHV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA + + E A R+ + V+++WLGGM+TN++T+ +SI +L L EL Sbjct: 61 AEKGGSVLFVGTKKQARESIYEEANRAEMFYVHNRWLGGMLTNFQTIKKSIDQLHYLNEL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +N + + + KKE+ + R+R+KL L GI+ M LP +FV+D +E +A+ EARRL Sbjct: 121 VNDGSIERYPKKEQAGLMRQREKLDSVLGGIQSMTRLPAALFVIDVRKEAIAVGEARRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR-QHSYMGADTKSA 240 IP+VAVVDTN +PD +DYVIPGNDD+ R+I L VA A IDG R + + K+ Sbjct: 181 IPVVAVVDTNCDPDNIDYVIPGNDDAIRAIRLMSSRVADACIDGRKRFEEKKQAFEDKAE 240 Query: 241 GETVVHSK----EGMQLEEDSQSSESSVLDGQEVAVVPEL 276 ET + E+ + DG + +V + Sbjct: 241 AETEEKPRPAPAAAAAAEDQKPVEREVISDGTDGPIVERI 280 >gi|167750008|ref|ZP_02422135.1| hypothetical protein EUBSIR_00976 [Eubacterium siraeum DSM 15702] gi|167657029|gb|EDS01159.1| hypothetical protein EUBSIR_00976 [Eubacterium siraeum DSM 15702] gi|291557908|emb|CBL35025.1| SSU ribosomal protein S2P [Eubacterium siraeum V10Sc8a] Length = 245 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 151/228 (66%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L +A I + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLDEAYNFIHEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA+D + E A R+ + VN++WLGGMMTN+KT+ + I++L L + Sbjct: 61 AAEGGEVLFVGTKKQAADSIKEEALRANAHYVNARWLGGMMTNFKTIEKRIKRLEQLHTM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + + + +KL++ L GI++M LP +FVVD +EK+A+ EA++L Sbjct: 121 ENDGTFDLLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPSALFVVDPRKEKIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ Q Sbjct: 181 IPVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMADAIIEARQGQ 228 >gi|313113598|ref|ZP_07799186.1| ribosomal protein S2 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624113|gb|EFQ07480.1| ribosomal protein S2 [Faecalibacterium cf. prausnitzii KLE1255] Length = 240 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 151/230 (65%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + + A R + VN++WLGGM+TN++T+ + I ++ L ++ Sbjct: 61 AAEGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMDQLAKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L Sbjct: 121 KENGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 230 >gi|224476379|ref|YP_002633985.1| 30S ribosomal protein S2 [Staphylococcus carnosus subsp. carnosus TM300] gi|254764490|sp|B9DPG8|RS2_STACT RecName: Full=30S ribosomal protein S2 gi|222420986|emb|CAL27800.1| 30S ribosomal protein S2 [Staphylococcus carnosus subsp. carnosus TM300] Length = 260 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 154/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + A+R+ Q+ VN +WLGG++TN+KT+S+ ++++ ++E++ Sbjct: 61 SEDGGKVLFVGTKKQAQESIKNEAERAGQFYVNQRWLGGILTNYKTISKRVKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + I+++ D+L + L GIRDM +P +FVVD +E+ AI EAR+L Sbjct: 121 EEDGLFEVLPKKEVVEIKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAVLEGQQ 226 >gi|125625188|ref|YP_001033671.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris MG1363] gi|281492807|ref|YP_003354787.1| 50S ribosomal protein S2P [Lactococcus lactis subsp. lactis KF147] gi|166225280|sp|A2RNV0|RS2_LACLM RecName: Full=30S ribosomal protein S2 gi|124493996|emb|CAL98994.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris MG1363] gi|281376459|gb|ADA65945.1| SSU ribosomal protein S2P [Lactococcus lactis subsp. lactis KF147] gi|300071997|gb|ADJ61397.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris NZ9000] gi|326407730|gb|ADZ64801.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. lactis CV56] Length = 255 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 94/231 (40%), Positives = 154/231 (66%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN H+IDL +TV ++ A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIHVIDLQKTVKLVDDAYNYVKNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA++ V E A R+ QY VN +WLGGM+TNW T+ + +L+++ ++ Sbjct: 61 SQEGAVVLFVGTKKQAAEAVKEEALRAGQYYVNHRWLGGMLTNWNTIQTRVTRLKEINKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++R++L++ + GI DM +PD+M++VD + E++A++EA+ L Sbjct: 121 EEEGTFEVLPKKEVVLLNKERERLEKFIGGIADMPRIPDVMYIVDPHAEQIAVKEAKTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+VA+VDTN++P+ +D VIP NDD+ R++ L +A A I+G + + Sbjct: 181 IPVVAMVDTNADPEPIDVVIPANDDAIRAVKLITAKMADAIIEGRQGEDAA 231 >gi|295093358|emb|CBK82449.1| SSU ribosomal protein S2P [Coprococcus sp. ART55/1] Length = 244 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 101/232 (43%), Positives = 149/232 (64%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YI+ ERN +IIDL ++V M+ A I D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKPYIYTERNGIYIIDLQKSVGMVDDAYNAIGDC 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I L+ EE+ Sbjct: 61 VANGGTILFVGTKKQAQDSIKSEAERCGMYYVNERWLGGMLTNFKTIQTRIATLKKYEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ +KL++ L GI++M +PD++FVVD +E++ IQEA+ L Sbjct: 121 EQDGTFDVLPKKEVIQIKKEMEKLEKNLGGIKNMKRIPDMIFVVDPKKERICIQEAQSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 I +V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + Sbjct: 181 IKLVGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAQQGVDADS 232 >gi|320540032|ref|ZP_08039688.1| 30S ribosomal subunit protein S2 [Serratia symbiotica str. Tucson] gi|320029881|gb|EFW11904.1| 30S ribosomal subunit protein S2 [Serratia symbiotica str. Tucson] Length = 241 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 115/241 (47%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNAALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKEAAHNCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +LDGI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELAKLENSLDGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R++ L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLTAVATAVREGRSQDLAVQVEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|291545676|emb|CBL18784.1| SSU ribosomal protein S2P [Ruminococcus sp. SR1/5] Length = 242 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 102/249 (40%), Positives = 155/249 (62%), Gaps = 8/249 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D VA GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADIVANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA D + A+R ++ VN +WLGGM+TN+KT+ I +L+++E + + Sbjct: 61 HILFVGTKKQAQDAIRTEAERCGEFFVNERWLGGMLTNFKTIQSRIARLKEIETMEADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + + ++ KL++ L GI++M +PD +F+VD +E++ +QEA L IP++ Sbjct: 121 FDVLPKKEVIELRKELVKLQKNLGGIKEMKRIPDAIFIVDPKKERICVQEAHTLGIPLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ ++ GE Sbjct: 181 ICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQ-------GTAEADGEIEAE 233 Query: 247 SKEGMQLEE 255 S+E EE Sbjct: 234 SEEFAATEE 242 >gi|54778755|gb|AAV39589.1| ribosomal protein S [synthetic construct] Length = 268 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 26 ATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIA 85 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL- 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 86 SRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQS 145 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L I Sbjct: 146 QDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGI 205 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 206 PVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 265 >gi|229588803|ref|YP_002870922.1| 30S ribosomal protein S2 [Pseudomonas fluorescens SBW25] gi|259495221|sp|C3K5E6|RS2_PSEFS RecName: Full=30S ribosomal protein S2 gi|229360669|emb|CAY47527.1| 30S ribosomal protein S2 [Pseudomonas fluorescens SBW25] Length = 245 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 112/248 (45%), Positives = 156/248 (62%), Gaps = 4/248 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G ++ G + Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRG---RNHVAGGTEQFVE 237 Query: 242 ETVVHSKE 249 E V + E Sbjct: 238 EAPVAAAE 245 >gi|296110372|ref|YP_003620753.1| 30S ribosomal protein S2 [Leuconostoc kimchii IMSNU 11154] gi|295831903|gb|ADG39784.1| 30S ribosomal protein S2 [Leuconostoc kimchii IMSNU 11154] Length = 258 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 107/255 (41%), Positives = 161/255 (63%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A I + Sbjct: 1 MAVISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFIRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 61 STDDANFLFVGTKKQASDAIAEEATRAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++R+KL + L GI+DM GLPD++FVVD +E++A++EA L Sbjct: 121 AEDGTFEQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S + Sbjct: 181 IPVVAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDSAPEDAFVAGD 240 Query: 242 ETVVHSKEGMQLEED 256 E +E + E+ Sbjct: 241 ENTESIEEITNIVEE 255 >gi|283795416|ref|ZP_06344569.1| ribosomal protein S2 [Clostridium sp. M62/1] gi|291077074|gb|EFE14438.1| ribosomal protein S2 [Clostridium sp. M62/1] gi|295091107|emb|CBK77214.1| SSU ribosomal protein S2P [Clostridium cf. saccharolyticum K10] Length = 250 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 96/224 (42%), Positives = 150/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V + +A + +SD Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGKVDEAYKAVSDI 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 66 AAEGGTILFVGTKKQAQEAIRVEAERCGMFYVNERWLGGMLTNFKTIQSRINRLKEIETM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ +QEA L Sbjct: 126 AEDGTFDVLPKKEVIALKKEWEKLEKNLGGIKEMKRIPDAIFVVDPKKERICVQEAHTLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ +VDTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 186 IPLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSRMADAVIEA 229 >gi|323141025|ref|ZP_08075931.1| ribosomal protein S2 [Phascolarctobacterium sp. YIT 12067] gi|322414473|gb|EFY05286.1| ribosomal protein S2 [Phascolarctobacterium sp. YIT 12067] Length = 245 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 144/226 (63%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + Sbjct: 1 MAIISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYNFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + + E A R + VN +WLGGM+TN+KT+ I +LR LE + Sbjct: 61 AAAGENILFVGTKKQAQEAMKEEATRCNMFFVNERWLGGMLTNFKTIQTRIARLRKLEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++++ + +KL + L GI+DM LP MF+VD +E +A+ EA +L Sbjct: 121 EADGTFDLLPKKEVISLKHEMEKLTKYLGGIKDMKKLPGAMFIVDPRKEHIAVLEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA VDTN +PD +D+VIP NDD+ R++ L +A A ++G Sbjct: 181 IPIVATVDTNCDPDEIDHVIPANDDAIRAVKLLTAKMADAVLEGRQ 226 >gi|227484994|ref|ZP_03915310.1| ribosomal protein S2 [Anaerococcus lactolyticus ATCC 51172] gi|227236991|gb|EEI87006.1| ribosomal protein S2 [Anaerococcus lactolyticus ATCC 51172] Length = 286 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 105/224 (46%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM R+IF ERN +I+DL +T +++A +V+ D Sbjct: 9 MAVVSMKKLLEAGVHFGHQTRRWNPKMARFIFTERNGIYIVDLQKTANQIEEAYKVMRDI 68 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR+LFV TK QA D + AKRS QY V+ +WLGGM+TN+KT+ +S++KL+ E + Sbjct: 69 VADGGRVLFVGTKKQAQDSIQSEAKRSGQYYVSHRWLGGMLTNFKTIRKSVEKLQRYERM 128 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L +++ DKL++ L GI+DM LPD++FVVD E +A+ EA+ L Sbjct: 129 EEDGTFDLLPKKEVLQYQKEMDKLEKNLGGIKDMEELPDVLFVVDPGEEAIAVHEAKILG 188 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A+VDTN +PD VD IPGNDD+ R++ L ++A A I+ Sbjct: 189 IPVIAIVDTNCDPDEVDVPIPGNDDAIRAVKLITSVMADAVIEA 232 >gi|282882124|ref|ZP_06290765.1| ribosomal protein S2 [Peptoniphilus lacrimalis 315-B] gi|281298154|gb|EFA90609.1| ribosomal protein S2 [Peptoniphilus lacrimalis 315-B] Length = 274 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 95/254 (37%), Positives = 160/254 (62%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKKIEEAYDFAREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 A GG+ILFV TK QA D + + AK+ +N +WLGG++TN+KT+ + I +L + +E Sbjct: 61 SANGGKILFVGTKKQAQDAIEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLFKLIEM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +R++L++ L GI+DM +PD +++VD +EK+A++EA L Sbjct: 121 EDDGTFDVLPKKEVIQLIHERERLEKFLGGIKDMDKMPDALYIVDPKKEKIAVKEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +PD +D+ IPGNDD+ R++ L + +A+A ++G + + D ++ Sbjct: 181 IPVIGIVDTNCDPDELDFPIPGNDDAIRAVKLITETIANAVLEGKQGTQNVVEDDEENMD 240 Query: 242 ETVVHSKEGMQLEE 255 E + +EE Sbjct: 241 TEENVPSEEVNIEE 254 >gi|197120704|ref|YP_002132655.1| 30S ribosomal protein S2 [Anaeromyxobacter sp. K] gi|209573728|sp|Q2IML9|RS2_ANADE RecName: Full=30S ribosomal protein S2 gi|238689904|sp|B4UMB8|RS2_ANASK RecName: Full=30S ribosomal protein S2 gi|196170553|gb|ACG71526.1| ribosomal protein S2 [Anaeromyxobacter sp. K] Length = 314 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 115/254 (45%), Positives = 167/254 (65%), Gaps = 2/254 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV + + AL+ +SD+VA+ Sbjct: 12 ITMKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAK 71 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D + E A RS Q+ V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 72 GGSVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 131 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE +ER+R+KL++ L GI+++ LP +FV+DT +E +A+ EA RL IP+ Sbjct: 132 GTYERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDTKKEHIAVHEANRLGIPV 191 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VAVVDTN +P+ +DYVIPGNDD+ RSI LF VA A I+G R +++ A+ E Sbjct: 192 VAVVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGKGRYSAWV-AEHGGHDERR 250 Query: 245 VHSKEGMQLEEDSQ 258 E + Sbjct: 251 EQEDRDAASERGHK 264 >gi|220915416|ref|YP_002490720.1| ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-1] gi|219953270|gb|ACL63654.1| ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-1] Length = 343 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 115/254 (45%), Positives = 167/254 (65%), Gaps = 2/254 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV + + AL+ +SD+VA+ Sbjct: 41 ITMKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAK 100 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG +LFV TK QA D + E A RS Q+ V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 101 GGSVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 160 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE +ER+R+KL++ L GI+++ LP +FV+DT +E +A+ EA RL IP+ Sbjct: 161 GTYERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDTKKEHIAVHEANRLGIPV 220 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VAVVDTN +P+ +DYVIPGNDD+ RSI LF VA A I+G R +++ A+ E Sbjct: 221 VAVVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGKGRYSAWV-AEHGGHDERR 279 Query: 245 VHSKEGMQLEEDSQ 258 E + Sbjct: 280 EQEDRDAASERGHK 293 >gi|315604536|ref|ZP_07879599.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 180 str. F0310] gi|315313548|gb|EFU61602.1| 30S ribosomal protein S2 [Actinomyces sp. oral taxon 180 str. F0310] Length = 273 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 121/256 (47%), Positives = 168/256 (65%), Gaps = 4/256 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + T Sbjct: 1 MAIVTMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + V E A+R VN +WLGGM+TN+ TV+ +Q+L++LE+ Sbjct: 61 VAHGGTLLFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVATRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+L Sbjct: 121 DFDDVAASGHTKKELLMMRREKDKLARTLGGIRDMTKVPSAVWIVDPKKEHLAVSEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 RIPIVA++DTN++PD VDY IPGNDD+ R++AL +VA A +G IAR G ++ Sbjct: 181 RIPIVAILDTNADPDEVDYRIPGNDDAIRAVALLTRVVADAVAEGLIARSDVRKGKGEET 240 Query: 240 AGETVVH-SKEGMQLE 254 E + +E ++ E Sbjct: 241 DAEPLAEWERELLEGE 256 >gi|303247587|ref|ZP_07333858.1| ribosomal protein S2 [Desulfovibrio fructosovorans JJ] gi|302491067|gb|EFL50961.1| ribosomal protein S2 [Desulfovibrio fructosovorans JJ] Length = 266 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 117/266 (43%), Positives = 170/266 (63%), Gaps = 1/266 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM +IF RN HIIDL QTV + QKA ++ Sbjct: 1 MPYVTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVRLYQKAHDFVAGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG+++FV TK QA + V + A+R+ Q+ V ++W+GGM+TN++T+ +SI +L++LE + Sbjct: 61 VAGGGKVVFVGTKRQAQESVKKEAERAGQFFVTNRWMGGMLTNFQTIKKSIDRLKNLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE + + R+ +KL L GI+DM LP F++D RE++A+QE R+L Sbjct: 121 FGDGSIKRFPKKEIVMMGREVEKLNANLGGIKDMDKLPQAAFIIDPKREEIAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAVVDTN +PD++DYVIPGNDD+ R+I LF VA A ++G A+ T Sbjct: 181 IPIVAVVDTNCDPDVIDYVIPGNDDAIRAIKLFASTVAEACLEGAAQTKDKDEEPTPDKD 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG 267 E E E + +ES+ Sbjct: 241 EKPEAVAEPAPAVEAAAQTESATTAE 266 >gi|296117644|ref|ZP_06836228.1| ribosomal protein S2 [Corynebacterium ammoniagenes DSM 20306] gi|295969375|gb|EFG82616.1| ribosomal protein S2 [Corynebacterium ammoniagenes DSM 20306] Length = 265 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 105/247 (42%), Positives = 160/247 (64%), Gaps = 2/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRHIFTDRNGIYIIDLQQTLTYIDEAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V E A R VN +WLGGM+TN++TVS+ ++++++L+ + Sbjct: 61 VAHGGTVLFVGTKKQAQEAVAEEATRVGMPYVNHRWLGGMLTNFQTVSKRLKRMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G TKKE L + R+R KL+R L GI +M P +++VDTN+E +A+ EA +L Sbjct: 121 DQAEDGYKGRTKKEVLMLTRERTKLERVLGGISEMTKAPSALWIVDTNKEHIAVAEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD V++ IPGNDD+ R+ L ++A+A +G + A K A Sbjct: 181 NIPVVAILDTNCDPDDVNFPIPGNDDAIRATKLLTGIIATAVDEGKKSREERQLAAAKEA 240 Query: 241 GETVVHS 247 Sbjct: 241 AGDTAEK 247 >gi|238924137|ref|YP_002937653.1| ribosomal protein S2 [Eubacterium rectale ATCC 33656] gi|238875812|gb|ACR75519.1| ribosomal protein S2 [Eubacterium rectale ATCC 33656] Length = 263 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 96/226 (42%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A +SD Sbjct: 20 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYDAVSDI 79 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG ILFV TK QA D + A+R Y VN +WLGGM+TN++T+ I +L+ +E + Sbjct: 80 AAQGGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFRTIESRIARLKAIETM 139 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI+DM +PD +FVVD +E++ I+EA+ L Sbjct: 140 SEDGTFDVLPKKEVIALKKEWEKLEKNLGGIKDMKRIPDAIFVVDPKKERICIKEAQALG 199 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ + DTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 200 ITLIGIADTNCDPDELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQ 245 >gi|288575129|ref|ZP_06393486.1| ribosomal protein S2 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570870|gb|EFC92427.1| ribosomal protein S2 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 265 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 102/268 (38%), Positives = 170/268 (63%), Gaps = 7/268 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE GV FGH+ WNPKM+ +IF ERN +IIDL +TV L+K+ + + Sbjct: 1 MSVVSMKQLLECGVHFGHQTRRWNPKMKPFIFTERNGVYIIDLQKTVRGLEKSYSFLREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG +LFV TK QA D + E A R Q+ +N +WLGG++TN++T+ + + K+ +L+ + Sbjct: 61 SKEGGSVLFVGTKRQAQDTIREEAIRCGQHYINQRWLGGLLTNFQTIRKRVLKMVELDRM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + +++++ KL++ L GI++M LPD +F++D RE +A++EAR++ Sbjct: 121 ESDGSWDDLTKKEVVLLKKQKAKLEKYLLGIKNMKVLPDAIFIIDPRREDIAVKEARKIG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++++VDTN +P+++DY IPGNDD+ R+I L L+ASA I+G G D + Sbjct: 181 IPVISIVDTNCDPEVIDYPIPGNDDAIRAIKLISGLMASAVIEGRQ------GVDGANGS 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + + +E + +E+ D E Sbjct: 235 DDSDDVNDKDIIEVKEKLTEAYGEDTAE 262 >gi|78485629|ref|YP_391554.1| ribosomal protein S2 [Thiomicrospira crunogena XCL-2] gi|78363915|gb|ABB41880.1| SSU ribosomal protein S2P [Thiomicrospira crunogena XCL-2] Length = 248 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 113/249 (45%), Positives = 159/249 (63%), Gaps = 6/249 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+PM AL + Sbjct: 5 MAKVTMRQMLEAGVHFGHQTRYWNPKMGEYIFGARNKIHIVNLEKTLPMFNDALNFLGGI 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A+ G +LFV TK A D V + AKR VN +WLGGM+TN+KT+ QSI+ L+DLE + Sbjct: 65 AAKKGTVLFVGTKRAAGDLVAQEAKRCGMPYVNHRWLGGMLTNFKTIKQSIKNLKDLEVQ 124 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R++ KL+ +L GI+DM +PD +F++DT EK+AIQEA+ L Sbjct: 125 EQDGTFEKITKKEALMRSRQKAKLELSLGGIKDMRAMPDAIFIIDTGNEKIAIQEAKNLG 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTN++P+ VDYVIPGNDD+ R+++L+ A A +G + + D Sbjct: 185 IPVVGVVDTNNDPNGVDYVIPGNDDAVRAVSLYLSAAADAINEGKGSITTAVEGD----- 239 Query: 242 ETVVHSKEG 250 E V E Sbjct: 240 EFVEEKAEA 248 >gi|257867706|ref|ZP_05647359.1| ribosomal protein S2 [Enterococcus casseliflavus EC30] gi|257874033|ref|ZP_05653686.1| ribosomal protein S2 [Enterococcus casseliflavus EC10] gi|325571090|ref|ZP_08146662.1| 30S ribosomal protein S2 [Enterococcus casseliflavus ATCC 12755] gi|257801789|gb|EEV30692.1| ribosomal protein S2 [Enterococcus casseliflavus EC30] gi|257808197|gb|EEV37019.1| ribosomal protein S2 [Enterococcus casseliflavus EC10] gi|325156175|gb|EGC68361.1| 30S ribosomal protein S2 [Enterococcus casseliflavus ATCC 12755] Length = 262 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 108/262 (41%), Positives = 165/262 (62%), Gaps = 3/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + E A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ Sbjct: 61 AEEGGVALFVGTKKQAQEAIKEEAIRSGQYYVNHRWLGGTLTNWETIQKRVARLKQINKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++R++L++ L GI DM +PD+M+VVD +E++AIQEAR+L Sbjct: 121 EEDGTFAVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAIQEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G + D + Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQGEDQVAEEDFAAES 240 Query: 242 ETVVHSKEGM--QLEEDSQSSE 261 S E + +E D+ S+E Sbjct: 241 TENATSIEEIVDVVEGDNASAE 262 >gi|167760592|ref|ZP_02432719.1| hypothetical protein CLOSCI_02966 [Clostridium scindens ATCC 35704] gi|167661813|gb|EDS05943.1| hypothetical protein CLOSCI_02966 [Clostridium scindens ATCC 35704] Length = 275 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 97/224 (43%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q +SD Sbjct: 28 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYQAVSDI 87 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + ++R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 88 AADGGTILFVGTKKQAQDAIKVESERCGMYYVNERWLGGMLTNFKTIKSRIARLKEIERM 147 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI++M LPD +FVVD +E++ +QEA L Sbjct: 148 SEDGTFDVLPKKEVIQLKKEWEKLEKNLGGIKEMKKLPDAIFVVDPKKERICVQEAHTLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 208 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 251 >gi|330445145|ref|ZP_08308797.1| ribosomal protein S2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489336|dbj|GAA03294.1| ribosomal protein S2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 242 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 114/242 (47%), Positives = 159/242 (65%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAEIEKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G++LFV TK AS+ + EAA QY VN++WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AARKGKVLFVGTKRAASESIKEAAVSCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI++MGGLPD MFVV + E +AI+EA L Sbjct: 121 STDGTFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVVGADCEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTN++PD VD+VIPGNDD+ R+I L+ VA + + + + Sbjct: 181 IPVFAVVDTNADPDGVDFVIPGNDDAIRAIQLYTGAVAQTVKEARNQDIAVQAEEDGFVA 240 Query: 242 ET 243 E Sbjct: 241 EA 242 >gi|310764950|gb|ADP09900.1| 30S ribosomal protein S2 [Erwinia sp. Ejp617] Length = 236 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 113/236 (47%), Positives = 160/236 (67%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL +S +R G Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ + Sbjct: 121 FDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD++IPGNDD+ R+++L+ VA+ +G ++ + +T + E Sbjct: 181 IVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVATTVREGRSQDLAQQAEETFADAE 236 >gi|308185740|ref|YP_003929871.1| 30S ribosomal protein S2 [Pantoea vagans C9-1] gi|308056250|gb|ADO08422.1| 30S ribosomal protein S2 [Pantoea vagans C9-1] Length = 257 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 110/236 (46%), Positives = 158/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 17 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 76 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+IL V TK A++ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 77 SSRKGKILIVGTKRAAAEAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 136 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 137 SQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + + Sbjct: 197 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVNLYLTAVATTVREGRSQDLAEQAEEA 252 >gi|159026538|emb|CAO86470.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 265 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 103/249 (41%), Positives = 153/249 (61%), Gaps = 1/249 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ +LLESGV FGH+ WNPKM +YI+ RN HIIDL QT ++++A + + Sbjct: 1 MPVVSLAELLESGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLIEEAYEFVRGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LF+ TK QA+ + + A RS + VN +WLGGM+TNW+T+ +++L++LEEL Sbjct: 61 ADSGKRFLFIGTKRQAAAIIKQEALRSGSHFVNQRWLGGMLTNWETIRGRVERLKELEEL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + R+ KL++ L GI+ M LPDL+ VVD RE AIQE ++L Sbjct: 121 ENSGALDKRPKKEASVLRRELGKLEKYLGGIKTMRRLPDLVIVVDQRREYNAIQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI++++DTN +PDLVD IP NDD+ RS+ L ++ A I+G + + + Sbjct: 181 IPIISLLDTNCDPDLVDVPIPANDDAIRSVKLILGKISDAIIEGRRGGQAAVEEYEEDYD 240 Query: 242 ETVVHSKEG 250 + +EG Sbjct: 241 NETEYEEEG 249 >gi|150390451|ref|YP_001320500.1| ribosomal protein S2 [Alkaliphilus metalliredigens QYMF] gi|167011230|sp|A6TRM3|RS2_ALKMQ RecName: Full=30S ribosomal protein S2 gi|149950313|gb|ABR48841.1| ribosomal protein S2 [Alkaliphilus metalliredigens QYMF] Length = 232 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 99/231 (42%), Positives = 154/231 (66%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV M+++ V+ + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKMVEQCYNVMKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + + E AKR Y VN +WLGGM+TN+KT+ I +L LE++ Sbjct: 61 ASEGSTILFVGTKKQAQEAIEEEAKRCGMYYVNQRWLGGMLTNFKTIKLRIDRLHKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + + +KL++ L GI+ M +PD +F+VD +E++AI+EA+ L Sbjct: 121 AEDGTFEVLPKKEVIKLRHEMEKLEKFLGGIKGMTQMPDALFIVDPRKERIAIKEAQTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP++++VDTN +PD +DY+IPGNDD+ R++ L +A+A I+G + + Sbjct: 181 IPVISIVDTNCDPDEIDYMIPGNDDAIRAVKLLTATMANAIIEGKQVEQTE 231 >gi|257878536|ref|ZP_05658189.1| ribosomal protein S2 [Enterococcus faecium 1,230,933] gi|257883171|ref|ZP_05662824.1| ribosomal protein S2 [Enterococcus faecium 1,231,502] gi|257884332|ref|ZP_05663985.1| ribosomal protein S2 [Enterococcus faecium 1,231,501] gi|257887073|ref|ZP_05666726.1| ribosomal protein S2 [Enterococcus faecium 1,141,733] gi|257889267|ref|ZP_05668920.1| ribosomal protein S2 [Enterococcus faecium 1,231,410] gi|257894705|ref|ZP_05674358.1| ribosomal protein S2 [Enterococcus faecium 1,231,408] gi|257895638|ref|ZP_05675291.1| ribosomal protein S2 [Enterococcus faecium Com12] gi|257898228|ref|ZP_05677881.1| ribosomal protein S2 [Enterococcus faecium Com15] gi|258615938|ref|ZP_05713708.1| 30S ribosomal protein S2 [Enterococcus faecium DO] gi|260560121|ref|ZP_05832299.1| ribosomal protein S2 [Enterococcus faecium C68] gi|261208150|ref|ZP_05922824.1| ribosomal protein S2 [Enterococcus faecium TC 6] gi|289566199|ref|ZP_06446632.1| 30S ribosomal protein S2 [Enterococcus faecium D344SRF] gi|293377751|ref|ZP_06623940.1| ribosomal protein S2 [Enterococcus faecium PC4.1] gi|293556639|ref|ZP_06675204.1| ribosomal protein S2 [Enterococcus faecium E1039] gi|293560150|ref|ZP_06676653.1| ribosomal protein S2 [Enterococcus faecium E1162] gi|293567413|ref|ZP_06678760.1| ribosomal protein S2 [Enterococcus faecium E1071] gi|293570624|ref|ZP_06681675.1| ribosomal protein S2 [Enterococcus faecium E980] gi|294613947|ref|ZP_06693882.1| ribosomal protein S2 [Enterococcus faecium E1636] gi|294620326|ref|ZP_06699642.1| ribosomal protein S2 [Enterococcus faecium E1679] gi|294620753|ref|ZP_06699960.1| ribosomal protein S2 [Enterococcus faecium U0317] gi|257812764|gb|EEV41522.1| ribosomal protein S2 [Enterococcus faecium 1,230,933] gi|257818829|gb|EEV46157.1| ribosomal protein S2 [Enterococcus faecium 1,231,502] gi|257820170|gb|EEV47318.1| ribosomal protein S2 [Enterococcus faecium 1,231,501] gi|257823127|gb|EEV50059.1| ribosomal protein S2 [Enterococcus faecium 1,141,733] gi|257825627|gb|EEV52253.1| ribosomal protein S2 [Enterococcus faecium 1,231,410] gi|257831084|gb|EEV57691.1| ribosomal protein S2 [Enterococcus faecium 1,231,408] gi|257832203|gb|EEV58624.1| ribosomal protein S2 [Enterococcus faecium Com12] gi|257836140|gb|EEV61214.1| ribosomal protein S2 [Enterococcus faecium Com15] gi|260073956|gb|EEW62280.1| ribosomal protein S2 [Enterococcus faecium C68] gi|260077584|gb|EEW65301.1| ribosomal protein S2 [Enterococcus faecium TC 6] gi|289161977|gb|EFD09844.1| 30S ribosomal protein S2 [Enterococcus faecium D344SRF] gi|291589810|gb|EFF21611.1| ribosomal protein S2 [Enterococcus faecium E1071] gi|291593222|gb|EFF24796.1| ribosomal protein S2 [Enterococcus faecium E1636] gi|291593438|gb|EFF24996.1| ribosomal protein S2 [Enterococcus faecium E1679] gi|291599733|gb|EFF30743.1| ribosomal protein S2 [Enterococcus faecium U0317] gi|291601174|gb|EFF31461.1| ribosomal protein S2 [Enterococcus faecium E1039] gi|291605883|gb|EFF35314.1| ribosomal protein S2 [Enterococcus faecium E1162] gi|291609295|gb|EFF38566.1| ribosomal protein S2 [Enterococcus faecium E980] gi|292643751|gb|EFF61872.1| ribosomal protein S2 [Enterococcus faecium PC4.1] Length = 260 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 104/260 (40%), Positives = 160/260 (61%), Gaps = 6/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 61 AEEGGVALFVGTKKQAQEAIKEEATRAGQYFVNHRWLGGTLTNWDTIQKRISRLKQINAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 121 EEDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD----- 236 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G + + D Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITSKMADAFIEGNQGEDQVVEEDFTEEN 240 Query: 237 TKSAGETVVHSKEGMQLEED 256 T ++ E +V EG + Sbjct: 241 TATSIEEIVDVVEGDNSSAE 260 >gi|163816848|ref|ZP_02208211.1| hypothetical protein COPEUT_03038 [Coprococcus eutactus ATCC 27759] gi|158448105|gb|EDP25100.1| hypothetical protein COPEUT_03038 [Coprococcus eutactus ATCC 27759] Length = 249 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 102/232 (43%), Positives = 149/232 (64%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YI+ ERN +IIDL ++V M+ A I D Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMKPYIYTERNGIYIIDLQKSVGMVDDAYNAIGDC 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I L+ EE+ Sbjct: 66 VANGGTILFVGTKKQAQDSIKSEAERCGMYYVNERWLGGMLTNFKTIQTRIATLKKYEEM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ +KL++ L GI+DM +PD++FVVD +E++ IQEA+ L Sbjct: 126 EQDGTFDVLPKKEVIQIKKEMEKLEKNLGGIKDMKRIPDMIFVVDPKKERICIQEAQSLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 I +V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + Sbjct: 186 IKLVGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAQQGVDADS 237 >gi|291616345|ref|YP_003519087.1| RpsB [Pantoea ananatis LMG 20103] gi|291151375|gb|ADD75959.1| RpsB [Pantoea ananatis LMG 20103] Length = 258 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 110/236 (46%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ W PKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 18 MATVSMRDMLKAGVHFGHQTRYWCPKMKPFIFGARNKVHIINLEKTVPMFNDALAELTKI 77 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK A++ + E+A Q+ VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 78 SSRKGKILFVGTKRAAAEAIKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKELETQ 137 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 138 SQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 197 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+ A+VDTNS+PD VDYVIPGNDD+ R+I L+ VA+ +G ++ + + Sbjct: 198 IPVFAIVDTNSDPDGVDYVIPGNDDAIRAINLYLTAVATTVREGRSQDLAEQAEEA 253 >gi|260913181|ref|ZP_05919663.1| 30S ribosomal protein S2 [Pasteurella dagmatis ATCC 43325] gi|260632768|gb|EEX50937.1| 30S ribosomal protein S2 [Pasteurella dagmatis ATCC 43325] Length = 240 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 110/241 (45%), Positives = 158/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNDALVELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK A++ V A QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKILFVGTKRAATEAVKSTALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G Q++ + Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAAAAVKEGR-NQNAVSEESFTAEA 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|209573711|sp|A7GWR7|RS2_CAMC5 RecName: Full=30S ribosomal protein S2 Length = 263 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 117/265 (44%), Positives = 165/265 (62%), Gaps = 4/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+R+IF ER +IIDL +T+ + ++ D A Sbjct: 2 VTMRDLLECGVHFGHQTRRWNPKMKRFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + Sbjct: 62 GKTILFVGTKKQAVEAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL L GIR+M LPD++F+VDT +EK+A+QEA RL++P+ Sbjct: 122 GSINLLTKKEALMLRRKKEKLIATLGGIRNMKNLPDMVFIVDTVKEKIAVQEANRLKMPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VDY IPGNDD+ RS+ LFC +A A +G + A +A E Sbjct: 182 VAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEGKSLLEQDSDA---NADEAE 238 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 V +E + ++ S E + E Sbjct: 239 VSQEEKDAVVAEAMSEEDFASEDDE 263 >gi|329889356|ref|ZP_08267699.1| ribosomal protein S2 [Brevundimonas diminuta ATCC 11568] gi|328844657|gb|EGF94221.1| ribosomal protein S2 [Brevundimonas diminuta ATCC 11568] Length = 280 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 133/247 (53%), Positives = 189/247 (76%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP+F++R LLE+G FGH+ WNPKM+RYIF R+N HIIDLSQT+P+L +AL + Sbjct: 1 MALPEFSMRTLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTMPLLHQALVAVR 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D A+GGR+LFV TK QA+D V +AA R AQY +N++WLGG +TNW+TVS SIQ+LR+LE Sbjct: 61 DVAAKGGRVLFVGTKRQAADPVAQAATRCAQYYMNNRWLGGTLTNWRTVSNSIQRLRELE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ +G KKE L ++R++D+L+ +L GI+DMG +PD+MFV+DTN+E +AIQEAR+L Sbjct: 121 GIVEGGGEGRNKKELLTLQREKDRLELSLGGIKDMGSVPDIMFVIDTNKEAIAIQEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A++DTNS+PD + Y +PGNDD++R+I +CDL+A A +DG+A + G D ++ Sbjct: 181 NIPIIAILDTNSDPDGITYPVPGNDDAARAIQTYCDLIADAVLDGLAAGAAAQGIDLGAS 240 Query: 241 GETVVHS 247 V + Sbjct: 241 EAPVEPA 247 >gi|291522664|emb|CBK80957.1| SSU ribosomal protein S2P [Coprococcus catus GD/7] Length = 243 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 149/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A I D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYNAIKDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E++ Sbjct: 61 VADGGTILFVGTKKQAQDAIKAEAERCGMYYVNQRWLGGMLTNFKTIESRIARLKAIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ +KL++ L GI+DM +PD +F+VD +E++ +QEA L Sbjct: 121 SEDGTFEVLPKKEVIELKKEWEKLEKNLGGIKDMKRIPDAIFIVDPKKERICVQEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQ 226 >gi|300173181|ref|YP_003772347.1| 30S ribosomal protein S2 [Leuconostoc gasicomitatum LMG 18811] gi|299887560|emb|CBL91528.1| 30S ribosomal protein S2 [Leuconostoc gasicomitatum LMG 18811] Length = 258 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 105/255 (41%), Positives = 161/255 (63%), Gaps = 1/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ W+PKM+ YIF ERN HIIDL +TV ++ +A + + Sbjct: 1 MAVISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFVRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 LFV TK QASD + E A R+ QY +N +WLGG +TNW T+ IQ+L+DLE + Sbjct: 61 STDDANFLFVGTKKQASDAIAEEATRAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEVM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++R+KL + L G++DM GLPD++FVVD +E++A++EA L Sbjct: 121 AEDGTFEQLPKKEVVLLNKQREKLDKFLGGVKDMPGLPDVLFVVDPKKEEIAVKEANMLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN+NP++VD IP NDD+ R++ L +A A I+G Q S + Sbjct: 181 IPVVAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDSAPEDAFVAGN 240 Query: 242 ETVVHSKEGMQLEED 256 E +E + E+ Sbjct: 241 ENTESIEEITNIVEE 255 >gi|308048669|ref|YP_003912235.1| 30S ribosomal protein S2P [Ferrimonas balearica DSM 9799] gi|307630859|gb|ADN75161.1| SSU ribosomal protein S2P [Ferrimonas balearica DSM 9799] Length = 242 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 159/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM+ +AL + Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEHTVPMMNEALAYLGGV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A V EAA+ Q+ V+++WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKNGKVLFVGTKRAAGQAVREAAQSCDQFYVDNRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ KL+++L GI+DMGGLPD +FV+D E +AI+EA L Sbjct: 121 AQDGTFEKLTKKEALMRSREMAKLEKSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN+NPD VDY++PGNDD+ R+I L+ VA A +G ++ + Sbjct: 181 IPVVAIVDTNTNPDGVDYIVPGNDDAIRAIQLYTGAVAQAVKEGRSQDLAVQAEQDGFVE 240 >gi|291530477|emb|CBK96062.1| SSU ribosomal protein S2P [Eubacterium siraeum 70/3] Length = 245 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 150/228 (65%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L +A I + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLDEAYNFIHEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA+D + E A R+ + VN++WLGGMMTN+KT+ + I +L L + Sbjct: 61 AAEGGEVLFVGTKKQAADSIKEEALRANAHYVNARWLGGMMTNFKTIEKRINRLEQLHTM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + + + +KL++ L GI++M LP +FVVD +EK+A+ EA++L Sbjct: 121 ENDGTFDLLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPSALFVVDPRKEKIAVSEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+ Q Sbjct: 181 IPVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMADAIIEARQGQ 228 >gi|212696166|ref|ZP_03304294.1| hypothetical protein ANHYDRO_00702 [Anaerococcus hydrogenalis DSM 7454] gi|212676795|gb|EEB36402.1| hypothetical protein ANHYDRO_00702 [Anaerococcus hydrogenalis DSM 7454] Length = 257 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 102/224 (45%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM ++IF ERN +IIDL++T + KA +VI D Sbjct: 1 MSVVSMKKLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLAKTSNQIDKAYEVIKDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG ILFV TK QA D + + AKR QY V+++WLGGM+TN+ T+ S+ KL+ E + Sbjct: 61 ASEGGSILFVGTKKQAQDSIEQEAKRCGQYYVSNRWLGGMLTNFNTIRNSVNKLKKYETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L ++ DKL++ L GI++M LPD +FVVD + E++A+ EA+ L Sbjct: 121 EEDGTFDLLPKKEVLQYNKEMDKLEKNLGGIKEMEELPDALFVVDPSNEQIAVHEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++++VDTN +PD+VD IPGNDD+ R++ L ++A A I+G Sbjct: 181 IPVISIVDTNCDPDVVDIAIPGNDDAIRAVKLITSVMADAVIEG 224 >gi|121998248|ref|YP_001003035.1| 30S ribosomal protein S2 [Halorhodospira halophila SL1] gi|166225278|sp|A1WX21|RS2_HALHL RecName: Full=30S ribosomal protein S2 gi|121589653|gb|ABM62233.1| SSU ribosomal protein S2P [Halorhodospira halophila SL1] Length = 247 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 151/242 (62%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++RQ+LE+GV FGH+ W+PKM YIF ERN HII+L +T+P+ + AL Sbjct: 1 MADVSMRQMLEAGVHFGHQTRFWDPKMRPYIFGERNKIHIINLEKTLPLYKDALNFAGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + GG+ILFV TK A + V E A R V+ +WLGGMMTN++TV SI +L+DLE + Sbjct: 61 ASNGGKILFVGTKRPARELVREHAARCGMPYVDHRWLGGMMTNFRTVKHSIARLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TK+E L + R+R+KL R+L GI++M LPD MFVVD E +AI EA++L Sbjct: 121 AEDGTFDKVTKREALALSREREKLDRSLSGIKNMERLPDAMFVVDVGYEHIAISEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTN +P VDYVIPGNDD+ R+I L+ +A A I+ A Sbjct: 181 IPVIGVVDTNCSPREVDYVIPGNDDAIRAIELYVSGIADAVIEAKQASSHAAAAGKDDFV 240 Query: 242 ET 243 E Sbjct: 241 EI 242 >gi|227551766|ref|ZP_03981815.1| 30S ribosomal protein S2 [Enterococcus faecium TX1330] gi|227179071|gb|EEI60043.1| 30S ribosomal protein S2 [Enterococcus faecium TX1330] Length = 300 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 104/260 (40%), Positives = 160/260 (61%), Gaps = 6/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 41 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKSV 100 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 101 AEEGGVALFVGTKKQAQEAIKEEATRAGQYFVNHRWLGGTLTNWDTIQKRISRLKQINAM 160 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 161 EEDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 220 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD----- 236 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G + + D Sbjct: 221 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITSKMADAFIEGNQGEDQVVEEDFTEEN 280 Query: 237 TKSAGETVVHSKEGMQLEED 256 T ++ E +V EG + Sbjct: 281 TATSIEEIVDVVEGDNSSAE 300 >gi|160945235|ref|ZP_02092461.1| hypothetical protein FAEPRAM212_02754 [Faecalibacterium prausnitzii M21/2] gi|158442966|gb|EDP19971.1| hypothetical protein FAEPRAM212_02754 [Faecalibacterium prausnitzii M21/2] Length = 259 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 102/230 (44%), Positives = 151/230 (65%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + Sbjct: 20 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEV 79 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + + A R + VN++WLGGMMTN++T+ + I ++ L ++ Sbjct: 80 AAEGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMMTNFRTIRKRIDRMDQLAKM 139 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L Sbjct: 140 KENGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLN 199 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 200 IPIVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 249 >gi|312879898|ref|ZP_07739698.1| SSU ribosomal protein S2P [Aminomonas paucivorans DSM 12260] gi|310783189|gb|EFQ23587.1| SSU ribosomal protein S2P [Aminomonas paucivorans DSM 12260] Length = 284 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE GV FGH+ WNPKM+ +IF ERN +IIDL +TV L+KA + + Sbjct: 1 MAVVSMKQLLECGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKGLEKAYDFVREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILFV TK QA + + A +S Q+ +N +WLGG++TN+ T+ + + ++ +LE++ Sbjct: 61 SKSGGSILFVGTKRQAQEPIRNEALKSGQFYINQRWLGGLLTNFATIRRRVNRMVELEQM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + + KKE + + ++R+KL++ L GI+DM PD +F++D RE +A+QEAR+L Sbjct: 121 ENDGSINRYPKKEIIQLRKEREKLEKYLSGIKDMRETPDALFIIDPRRETIAVQEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN +P+++D+ IPGNDD+ R+I L L++SA ++G Sbjct: 181 IPVVAIVDTNCDPEVIDFPIPGNDDAIRAIELITGLMSSAFVEGRQ 226 >gi|299144036|ref|ZP_07037116.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518521|gb|EFI42260.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 249 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 98/252 (38%), Positives = 161/252 (63%), Gaps = 4/252 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM R+IF +RN +IIDL +TV + +A + I + + GG Sbjct: 1 MKNLLEAGVHFGHQTRRWNPKMSRFIFTQRNGIYIIDLQKTVKKVDEAYEFIRELSSEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +ILFV TK QA D V + AK+ +N +WLGG++TN+KT+ + I +L++L E+ + Sbjct: 61 KILFVGTKKQAQDAVEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLQELTEMETDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + + +R++L++ L GI+DM +PD +F+VD +E++A++EA L IP+V Sbjct: 121 FDVLPKKEVIQLRHERERLEKFLGGIKDMDRVPDALFIVDPRKERIAVKEAHILGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTN +PD +D+ IPGNDD+ R++ L + +++A ++G D E V Sbjct: 181 IVDTNCDPDEIDFPIPGNDDAIRAVKLITETISNAVLEGKQGAQIQ---DYSENEEVKVS 237 Query: 247 SKEGMQLEEDSQ 258 +E +E++ + Sbjct: 238 EEEQPVIEKEEE 249 >gi|314937495|ref|ZP_07844828.1| ribosomal protein S2 [Enterococcus faecium TX0133a04] gi|314942154|ref|ZP_07849008.1| ribosomal protein S2 [Enterococcus faecium TX0133C] gi|314947506|ref|ZP_07850921.1| ribosomal protein S2 [Enterococcus faecium TX0082] gi|314951493|ref|ZP_07854542.1| ribosomal protein S2 [Enterococcus faecium TX0133A] gi|314992583|ref|ZP_07858001.1| ribosomal protein S2 [Enterococcus faecium TX0133B] gi|314995482|ref|ZP_07860582.1| ribosomal protein S2 [Enterococcus faecium TX0133a01] gi|313590316|gb|EFR69161.1| ribosomal protein S2 [Enterococcus faecium TX0133a01] gi|313592875|gb|EFR71720.1| ribosomal protein S2 [Enterococcus faecium TX0133B] gi|313596333|gb|EFR75178.1| ribosomal protein S2 [Enterococcus faecium TX0133A] gi|313599077|gb|EFR77922.1| ribosomal protein S2 [Enterococcus faecium TX0133C] gi|313643136|gb|EFS07716.1| ribosomal protein S2 [Enterococcus faecium TX0133a04] gi|313646056|gb|EFS10636.1| ribosomal protein S2 [Enterococcus faecium TX0082] Length = 300 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 104/260 (40%), Positives = 160/260 (61%), Gaps = 6/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + Sbjct: 41 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKSV 100 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + E A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 101 AEEGGVALFVGTKKQAQEAIKEEATRAGQYFVNHRWLGGTLTNWDTIQKRISRLKQINAM 160 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 161 EEDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 220 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD----- 236 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G + + D Sbjct: 221 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITSKMADAFIEGNQGEDQVVEEDFTEEN 280 Query: 237 TKSAGETVVHSKEGMQLEED 256 T ++ E +V EG + Sbjct: 281 TATSIEEIVDVVEGDNSSAE 300 >gi|302386230|ref|YP_003822052.1| ribosomal protein S2 [Clostridium saccharolyticum WM1] gi|302196858|gb|ADL04429.1| ribosomal protein S2 [Clostridium saccharolyticum WM1] Length = 246 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 95/224 (42%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVVKVDEAYKAVSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ + +L+ +E + Sbjct: 61 AAEGGKILFVGTKKQAQDAIKSEAERCGMYFVNERWLGGMLTNFKTIQSRVARLKQIETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI+DM +PD +FVVD +E++ +QEA L Sbjct: 121 SQDGTFDVLPKKEVIALKKEWEKLEKNLGGIKDMKKIPDAIFVVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGIADTNCDPEELDFVIPGNDDAIRAVKLIVSKMADAVIEA 224 >gi|300869880|ref|YP_003784751.1| 30S ribosomal protein S2 [Brachyspira pilosicoli 95/1000] gi|300687579|gb|ADK30250.1| 30S ribosomal protein S2 [Brachyspira pilosicoli 95/1000] Length = 273 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 114/252 (45%), Positives = 168/252 (66%), Gaps = 3/252 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP ++ LLE+GV FGH+ WNPKM+ +IF ERN+ HIIDL +T+ ++KA + Sbjct: 3 MSLPA--MKDLLEAGVHFGHQTRKWNPKMKPFIFQERNDIHIIDLMKTLTYVKKAYDAVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + GG ILFV TK QAS + EAA++ Y VN++WLGGM+TN+ T+ +SI +L+ +E Sbjct: 61 EMSRNGGNILFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIE 120 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E ++ KKE + + +++DKL++ GI+DM LPD++FV+D +E +A+ EAR+ Sbjct: 121 KEEVDGTFDKLPKKEVILLLKEKDKLEKNFAGIKDMENLPDMIFVIDPMQEHIAVSEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVDTN NP+L+DY IPGNDD+ R+I+LF +++SA IDG A +S Sbjct: 181 LGIPVVAVVDTNCNPELIDYPIPGNDDAIRAISLFAGVISSAIIDGQNEAGKETLAKHES 240 Query: 240 AGETVVHSKEGM 251 GE + Sbjct: 241 TGEIAEEVYDNS 252 >gi|332686707|ref|YP_004456481.1| 30S ribosomal protein S2p (SAe) [Melissococcus plutonius ATCC 35311] gi|332370716|dbj|BAK21672.1| SSU ribosomal protein S2p (SAe) [Melissococcus plutonius ATCC 35311] Length = 265 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 100/264 (37%), Positives = 164/264 (62%), Gaps = 3/264 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 61 AEDGGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKQINTM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++R++L++ L GI DM +PD+M+VVD +E++A+QEA++L Sbjct: 121 EEDGTFDVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAVQEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA--DTKS 239 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G + + ++ Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLLTAKMADAFIEGNQGEDQAVEEVFTDEA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESS 263 + T + E + +++++ Sbjct: 241 SEPTSIEQVADQAAENEDTANKTA 264 >gi|327392796|dbj|BAK10218.1| 30S ribosomal protein S2 RpsB [Pantoea ananatis AJ13355] Length = 241 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 110/236 (46%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ W PKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWCPKMKPFIFGARNKVHIINLEKTVPMFNDALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK A++ + E+A Q+ VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 SSRKGKILFVGTKRAAAEAIKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+ A+VDTNS+PD VDYVIPGNDD+ R+I L+ VA+ +G ++ + + Sbjct: 181 IPVFAIVDTNSDPDGVDYVIPGNDDAIRAINLYLTAVATTVREGRSQDLAEQAEEA 236 >gi|269101939|ref|ZP_06154636.1| SSU ribosomal protein S2p (SAe) [Photobacterium damselae subsp. damselae CIP 102761] gi|268161837|gb|EEZ40333.1| SSU ribosomal protein S2p (SAe) [Photobacterium damselae subsp. damselae CIP 102761] Length = 241 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 116/241 (48%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I+ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAEINKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G++LFV TK AS+ V EAA QY VN++WLGGM+TN+KTV QSI++L+DLE Sbjct: 61 AARKGKVLFVGTKRAASEAVKEAAINCDQYYVNNRWLGGMLTNYKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD +FVV + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAIFVVGADCEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTN++PD VD+VIPGNDD+ R+I L+ VA A +G + D Sbjct: 181 IPVFAVVDTNADPDGVDFVIPGNDDAIRAIQLYTGAVAQAVNEGRNQDIVAQAEDGFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|317497300|ref|ZP_07955623.1| ribosomal protein S2 [Lachnospiraceae bacterium 5_1_63FAA] gi|291559418|emb|CBL38218.1| SSU ribosomal protein S2P [butyrate-producing bacterium SSC/2] gi|316895369|gb|EFV17528.1| ribosomal protein S2 [Lachnospiraceae bacterium 5_1_63FAA] Length = 240 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 106/243 (43%), Positives = 159/243 (65%), Gaps = 5/243 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKDC 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA D + A+R + VN +WLGGMMTN+KT+ I +L+ ++E+ Sbjct: 61 VAQGGKILFVGTKKQAQDSIQAEAERCGMFYVNQRWLGGMMTNFKTIESRIARLKKIKEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K+E L + +++DKL++ L GI +MGGLPD++FVVD +E + +QEA L Sbjct: 121 EEDGTFDVLPKREVLELNKEKDKLQKNLGGIEEMGGLPDMIFVVDPKKESICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V + DTNS+P+ +DY+IPGNDD+ R++ L +A A I+ + + AD++ Sbjct: 181 IPLVGIADTNSDPEELDYIIPGNDDAIRAVKLITSAMADAVIEA----NQGIDADSEEVA 236 Query: 242 ETV 244 E Sbjct: 237 EDA 239 >gi|152968763|ref|YP_001333872.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953612|gb|ABR75642.1| 30S ribosomal protein S2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 236 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 114/236 (48%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIAARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEAE 236 >gi|291288430|ref|YP_003505246.1| 30S ribosomal protein S2 [Denitrovibrio acetiphilus DSM 12809] gi|290885590|gb|ADD69290.1| ribosomal protein S2 [Denitrovibrio acetiphilus DSM 12809] Length = 269 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 152/250 (60%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM +Y+F RN +I+DL +TV A + D Sbjct: 1 MSYISMKNLLEAGVHFGHQTKRWNPKMSKYVFGARNGIYILDLQKTVQCFNTAYEFTRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA + + EAA + + +N +WLGG +TN++T+ IQ+L++LEE+ Sbjct: 61 ARQGSTFLFVGTKKQAQEAIKEAANKCGAFYMNERWLGGTLTNFQTIKSRIQRLKELEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +TKKE ++++ +KL + L GI+DM G+PD+MF++D E+ A+ EA++L Sbjct: 121 FESGYINKYTKKEASKLKKELEKLSKNLGGIKDMPGIPDVMFIIDIKMEQNAVAEAKKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A+VDTN +PDLVD IPGNDD+ R+ L +A A +G + M D + Sbjct: 181 IPIIAIVDTNCDPDLVDLPIPGNDDAIRACQLISGRIADAIAEGKQMREEDMAGDMQQLA 240 Query: 242 ETVVHSKEGM 251 E E + Sbjct: 241 EGDDVPVEEI 250 >gi|164687905|ref|ZP_02211933.1| hypothetical protein CLOBAR_01550 [Clostridium bartlettii DSM 16795] gi|164602318|gb|EDQ95783.1| hypothetical protein CLOBAR_01550 [Clostridium bartlettii DSM 16795] Length = 241 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 152/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV +++A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVEEAYNFMKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + E A+R + VN +WLGGM+TN+KT+ I+KLR+LE++ Sbjct: 61 AETGKPVLFVGTKKQAQEAIKEEAERCGMFYVNERWLGGMLTNYKTIQTRIKKLRELEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++KL++ L+GI++M LP +FVVD +E +AIQEA RL Sbjct: 121 EEEGVFEVLPKKEVIKLRALKEKLEKNLNGIKEMPELPGAIFVVDPRKENIAIQEAARLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+V +VDTN +PD +DY IPGNDD+ R++ L +A+A I+G Sbjct: 181 IPVVGIVDTNCDPDELDYAIPGNDDAIRAVKLITGAMATAIIEGRQ 226 >gi|256830143|ref|YP_003158871.1| 30S riboosomal protein S2 [Desulfomicrobium baculatum DSM 4028] gi|256579319|gb|ACU90455.1| ribosomal protein S2 [Desulfomicrobium baculatum DSM 4028] Length = 261 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 115/260 (44%), Positives = 164/260 (63%), Gaps = 4/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM +IF R HIIDL QTV + +KA I+DT Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPFIFGARKGIHIIDLQQTVKLYRKAHDFIADT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG+I+FV TK QA D + A+R Y V ++WLGG +TN++T+ SI +L+ LE + Sbjct: 61 VARGGKIIFVGTKRQAQDVIKTEAERCGMYHVTNRWLGGTLTNYQTIRTSITRLKKLEGM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F KKE + +ER+ KL L GI+DM P F++D +RE++A++E R+L Sbjct: 121 FEDGSVSRFLKKEVVRMEREVTKLNLTLGGIKDMEEPPAAAFIIDPHREEIAVKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY---MGADTK 238 IPIVAVVDTN +PDL+DY+IPGNDD+ R+I LF +A A ++G A A+ Sbjct: 181 IPIVAVVDTNCDPDLIDYIIPGNDDAIRAIKLFAGAMADACMEGAASTKDAPVEAKANKV 240 Query: 239 SAGETVVHSKEGMQLEEDSQ 258 E V S E ++ D + Sbjct: 241 PEVELPVGSAEPESVDTDEE 260 >gi|306828621|ref|ZP_07461815.1| 30S ribosomal protein S2 [Streptococcus mitis ATCC 6249] gi|304429229|gb|EFM32315.1| 30S ribosomal protein S2 [Streptococcus mitis ATCC 6249] Length = 275 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 17 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 76 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A+RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 77 AANDAVVLFVGTKKQAADAVKEEAERSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM 136 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 137 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 197 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAAVEAEFAAS 256 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 257 EAQADSIEEI 266 >gi|77360960|ref|YP_340535.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas haloplanktis TAC125] gi|123588801|sp|Q3IIX4|RS2_PSEHT RecName: Full=30S ribosomal protein S2 gi|76875871|emb|CAI87092.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas haloplanktis TAC125] Length = 242 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 114/226 (50%), Positives = 163/226 (72%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNTALKFLSGA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G++LFV TK AS+ V E+A S QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AANKGKVLFVGTKRAASEAVKESAIASDQYYVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTNSNPD VD+++PGNDD+ R+++L+ + VA+A +G Sbjct: 181 IPVVAIVDTNSNPDGVDFIVPGNDDAIRAVSLYTNAVATAITEGRE 226 >gi|118590011|ref|ZP_01547415.1| 30S ribosomal protein S2 [Stappia aggregata IAM 12614] gi|118437508|gb|EAV44145.1| 30S ribosomal protein S2 [Stappia aggregata IAM 12614] Length = 259 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 141/241 (58%), Positives = 188/241 (78%), Gaps = 1/241 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNP+M +YIF RN+ HI+DLSQTVP+L +AL+ +SDTV+ GG Sbjct: 1 MRQLLEAGVHFGHQKHRWNPRMGQYIFGVRNDVHIMDLSQTVPLLHQALKAVSDTVSGGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 R+L V TK QA + V AA+ SAQY VN++WLGGM+TNWKT+SQSIQ+LR LEE L+ + Sbjct: 61 RVLIVGTKRQAQEAVASAARNSAQYYVNARWLGGMLTNWKTISQSIQRLRKLEETLSSDA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKERL ++R+R+KL+R L GI+DMGG+PDL+FV+DTNRE +AIQEARRL IP+ A Sbjct: 121 ANALTKKERLFMDREREKLERNLGGIKDMGGIPDLIFVIDTNREAIAIQEARRLGIPVAA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 ++D+NSNP+ + Y +PGNDD+ R+++L+CDL+A AAIDGI+R G D + E V Sbjct: 181 ILDSNSNPEGITYPVPGNDDAGRALSLYCDLIARAAIDGISRAQGASGMDIGESEEAPVE 240 Query: 247 S 247 Sbjct: 241 E 241 >gi|154174229|ref|YP_001407659.1| 30S ribosomal protein S2 [Campylobacter curvus 525.92] gi|153793063|gb|EAU00943.2| ribosomal protein S2 [Campylobacter curvus 525.92] Length = 289 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 117/265 (44%), Positives = 165/265 (62%), Gaps = 4/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+R+IF ER +IIDL +T+ + ++ D A Sbjct: 28 VTMRDLLECGVHFGHQTRRWNPKMKRFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAE 87 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + Sbjct: 88 GKTILFVGTKKQAVEAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETMEED 147 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL L GIR+M LPD++F+VDT +EK+A+QEA RL++P+ Sbjct: 148 GSINLLTKKEALMLRRKKEKLIATLGGIRNMKNLPDMVFIVDTVKEKIAVQEANRLKMPV 207 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VDY IPGNDD+ RS+ LFC +A A +G + A +A E Sbjct: 208 VAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEGKSLLEQDSDA---NADEAE 264 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 V +E + ++ S E + E Sbjct: 265 VSQEEKDAVVAEAMSEEDFASEDDE 289 >gi|307297828|ref|ZP_07577634.1| ribosomal protein S2 [Thermotogales bacterium mesG1.Ag.4.2] gi|306917088|gb|EFN47470.1| ribosomal protein S2 [Thermotogales bacterium mesG1.Ag.4.2] Length = 283 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 97/258 (37%), Positives = 160/258 (62%), Gaps = 4/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGHR WNPKM+ YI+ ER +I+DL +T+ ++++A + ++ Sbjct: 14 VSVVSMKQLLEAGVHFGHRTRRWNPKMKPYIYGERKGIYIVDLQKTLKLIEEAYDFVRNS 73 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA V E AKR + VN++WLGG++TN+ T+ + I+ L++ EE+ Sbjct: 74 AQEGATFLFVGTKRQAQQIVEEEAKRCDSFYVNNRWLGGLLTNFTTIKKRIEALKNFEEM 133 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE+ I ++ DKL++ L G+++M LPD++F+VD +E++A+ EA +L Sbjct: 134 EESGKLSALPKKEQSMINKRLDKLRKNLSGVKEMQKLPDVIFIVDPKQEEIAVAEANKLG 193 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 I ++ + DTN +PD++D++IPGNDD+ R+I L +A A ++G + A +S Sbjct: 194 IKVIGIADTNCDPDVIDFIIPGNDDAIRAIQLIVHTMADAILEG---REGLEAAAIESKK 250 Query: 242 ETVVHSKEGMQLEEDSQS 259 T + EED S Sbjct: 251 VTTEEEAVKVSSEEDDTS 268 >gi|225375360|ref|ZP_03752581.1| hypothetical protein ROSEINA2194_00985 [Roseburia inulinivorans DSM 16841] gi|225212849|gb|EEG95203.1| hypothetical protein ROSEINA2194_00985 [Roseburia inulinivorans DSM 16841] Length = 301 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD Sbjct: 56 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAMSDI 115 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 116 AAEGGTILFVGTKKQAQDAIKSEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIETM 175 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ +KL++ L GI++M +PD +F+VD +E++ +QEA L Sbjct: 176 AADGTFEVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFIVDPKKERICVQEAHTLG 235 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 236 ITLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 279 >gi|313618586|gb|EFR90558.1| ribosomal protein S2 [Listeria innocua FSL S4-378] Length = 249 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 101/223 (45%), Positives = 154/223 (69%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ +E++ Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQXXXKIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 223 >gi|328957398|ref|YP_004374784.1| 30S ribosomal protein S2 [Carnobacterium sp. 17-4] gi|328673722|gb|AEB29768.1| 30S ribosomal protein S2 [Carnobacterium sp. 17-4] Length = 262 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 107/265 (40%), Positives = 161/265 (60%), Gaps = 4/265 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLADTAYNYMKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A RS QY VN +WLGG +TNW T+ + I++L+ + ++ Sbjct: 61 SENGGIALFVGTKKQAQEAIKDEATRSGQYFVNHRWLGGTLTNWDTIQKRIKRLKAINKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++RD+L++ L GI+DM +PD+MFVVD +E++AIQEA +L Sbjct: 121 EEDGTFDLLPKKEVGILIKQRDRLEKFLGGIQDMPRIPDVMFVVDPRKERIAIQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +PD +D +IP NDD+ R++ L +A A I+G Q + Sbjct: 181 IPVVAMVDTNCDPDEIDVIIPSNDDAIRAVKLITSKMADAMIEG--NQGEDEVVEETFTA 238 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLD 266 E + E +EE + E + Sbjct: 239 EAP-EASETASIEEIVEVVEGKNAE 262 >gi|126653714|ref|ZP_01725632.1| 30S ribosomal protein S2 [Bacillus sp. B14905] gi|126589678|gb|EAZ83814.1| 30S ribosomal protein S2 [Bacillus sp. B14905] Length = 239 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 155/238 (65%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + + A+RS Y +N +WLGG +TN+ T+ + + +++ +E++ Sbjct: 61 GQDGGKVLFVGTKKQAQEAIKDEAERSGNYYINQRWLGGTLTNFGTIQKRVARMKQIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EAR+L Sbjct: 121 EEEGTFEVLPKKEVIQLKKEHERLIKFLGGIRDMHDLPDVMFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+V +VDTN +PD +DYVIP NDD+ R++ L +A A I+ + + + Sbjct: 181 IPLVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALIESKQGEEEAPAVEVAA 238 >gi|81301339|ref|YP_401547.1| 30S ribosomal protein S2 [Synechococcus elongatus PCC 7942] gi|123728119|sp|Q31K59|RS2_SYNE7 RecName: Full=30S ribosomal protein S2 gi|81170220|gb|ABB58560.1| SSU ribosomal protein S2P [Synechococcus elongatus PCC 7942] Length = 251 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 90/225 (40%), Positives = 138/225 (61%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++ESGV FGH+ WNP+M YI+ RN HIIDL +T ++ A + + Sbjct: 1 MAIISLAEMMESGVHFGHQTRRWNPRMAPYIYTARNGVHIIDLVKTAQCVETAYRWVRTN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + E A R Y +N +WLGGM+TNW T+ + +L++LE + Sbjct: 61 AEQGKRFLFVGTKRQAAGIIAEEATRCGSYYINQRWLGGMLTNWATIKGRVDRLKELERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ ++L++ L GI++M LPD + ++D RE A+QE ++L Sbjct: 121 EETGALALRPKKEAAVLRRELERLQKYLGGIKNMRRLPDAVVIIDQKREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPIVA++DTN +PD+VD IPGNDD+ RS+ L +A A + Sbjct: 181 IPIVAMLDTNCDPDVVDVPIPGNDDAIRSVKLIVSKLADAIYEAR 225 >gi|270264820|ref|ZP_06193084.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13] gi|270041118|gb|EFA14218.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13] Length = 241 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMANAALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEYANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLTAVAAAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|56751589|ref|YP_172290.1| 30S ribosomal protein S2 [Synechococcus elongatus PCC 6301] gi|61215369|sp|Q5N1Q0|RS2_SYNP6 RecName: Full=30S ribosomal protein S2 gi|56686548|dbj|BAD79770.1| 30S ribosomal protein S2 [Synechococcus elongatus PCC 6301] Length = 251 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 90/225 (40%), Positives = 138/225 (61%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++ESGV FGH+ WNP+M YI+ RN HIIDL +T ++ A + + Sbjct: 1 MAIISLAEMMESGVHFGHQTRRWNPRMAPYIYTARNGVHIIDLVKTAQCVETAYRWVRTN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + E A R Y +N +WLGGM+TNW T+ + +L++LE + Sbjct: 61 AEQGKRFLFVGTKRQAAGIIAEEATRCGSYYINQRWLGGMLTNWATIKGRVDRLKELERM 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ ++L++ L GI++M LPD + ++D RE A+QE ++L Sbjct: 121 GETGALALRPKKEAAVLRRELERLQKYLGGIKNMRRLPDAVVIIDQKREYNAVQECQKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPIVA++DTN +PD+VD IPGNDD+ RS+ L +A A + Sbjct: 181 IPIVAMLDTNCDPDVVDVPIPGNDDAIRSVKLIVSKLADAIYEAR 225 >gi|295105545|emb|CBL03089.1| SSU ribosomal protein S2P [Faecalibacterium prausnitzii SL3/3] Length = 240 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 102/230 (44%), Positives = 151/230 (65%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV L +A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + + A R + VN++WLGGMMTN++T+ + I ++ L ++ Sbjct: 61 AAEGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMMTNFRTIRKRIDRMDQLAKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE +E + +KL + L G+++M LP MF+VD ++E++A+ EAR+L Sbjct: 121 KENGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN NPD +DYVIPGNDD+ R++ L +A A ++G Sbjct: 181 IPIVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 230 >gi|271963398|ref|YP_003337594.1| 30S ribosomal protein S2-like protein [Streptosporangium roseum DSM 43021] gi|270506573|gb|ACZ84851.1| Ribosomal protein S2-like protein [Streptosporangium roseum DSM 43021] Length = 317 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 116/257 (45%), Positives = 165/257 (64%), Gaps = 6/257 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+ P T+RQLLESGV FGH+ WNPKM+R+IF ERN +IIDL +++ + +A + Sbjct: 1 MSTPVVTMRQLLESGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKSLAFIDRAYDFVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +TVA GG I+F+ TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE Sbjct: 61 ETVAHGGTIMFIGTKKQAQEAIAEQAARVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELE 120 Query: 121 E--LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E N G TKKE L R+++KL+R L GIRDM +P ++VVDT +E + I EAR Sbjct: 121 ELDFDNVAASGLTKKELLMRRREKEKLERTLGGIRDMSRVPSAVWVVDTKKEHIGISEAR 180 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +L IP+VA++DTN +PD VDY IPGNDD+ R++ L +VA A G+ + D K Sbjct: 181 KLNIPVVAILDTNCDPDEVDYPIPGNDDAIRAVGLLTRVVADAVAAGLMARAGANRGDDK 240 Query: 239 SA----GETVVHSKEGM 251 A E + ++ + Sbjct: 241 PAVAGGAEPLAEWEQEL 257 >gi|227499526|ref|ZP_03929633.1| ribosomal protein S2 [Anaerococcus tetradius ATCC 35098] gi|227218405|gb|EEI83656.1| ribosomal protein S2 [Anaerococcus tetradius ATCC 35098] Length = 276 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 112/276 (40%), Positives = 169/276 (61%), Gaps = 3/276 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM +YIF ERN +IIDL +T +++A + D Sbjct: 1 MAVVSMKKLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTANQIEEAYATVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG++LFV TK QA D + + AKRS Q+ V+++WLGGM+TN+ T+ QSI KL+ E + Sbjct: 61 VADGGKVLFVGTKKQAQDSIEQEAKRSGQFYVSNRWLGGMLTNFGTIRQSINKLKKYEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L I+++ D+L++ L GI++M LPD++FVVD E +A+ EA+ L Sbjct: 121 EEDGTFDLLPKKEVLQIQKEMDRLEKNLGGIKEMENLPDVLFVVDPGEEAIAVHEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V++VDTN +PDLVD IPGNDD+ R++ L ++A A I+ A Q S A + Sbjct: 181 IPVVSIVDTNCDPDLVDIAIPGNDDAIRAVKLITSVIADAVIE--ANQGSQFDAAEEFEA 238 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + E+ S + + + E Sbjct: 239 EEDDEDVAEEETEDVSDEDIKEAAEEFKTQSLDETE 274 >gi|260589615|ref|ZP_05855528.1| ribosomal protein S2 [Blautia hansenii DSM 20583] gi|260539855|gb|EEX20424.1| ribosomal protein S2 [Blautia hansenii DSM 20583] Length = 256 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 152/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + I+D Sbjct: 11 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAIADI 70 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 71 AAEGGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIEAM 130 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +N++++ +KL++ L GI++M LPD +F+VD +E++ +QEA L Sbjct: 131 EADGTFDVLPKKEVINLKKELEKLQKNLGGIKEMKKLPDAIFIVDPKKERICVQEAHTLG 190 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + + Sbjct: 191 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQGEAADA 242 >gi|169824403|ref|YP_001692014.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 29328] gi|302380619|ref|ZP_07269084.1| ribosomal protein S2 [Finegoldia magna ACS-171-V-Col3] gi|303233747|ref|ZP_07320401.1| ribosomal protein S2 [Finegoldia magna BVS033A4] gi|238687736|sp|B0S184|RS2_FINM2 RecName: Full=30S ribosomal protein S2 gi|167831208|dbj|BAG08124.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 29328] gi|302311562|gb|EFK93578.1| ribosomal protein S2 [Finegoldia magna ACS-171-V-Col3] gi|302495181|gb|EFL54933.1| ribosomal protein S2 [Finegoldia magna BVS033A4] Length = 269 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 99/234 (42%), Positives = 145/234 (61%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV + A + D Sbjct: 1 MSVVSMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKQIDDAYNYVRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + AKR Q+ V+ +WLGGM+TN+KT+ I +L L E+ Sbjct: 61 VADGGEVLFVGTKKQAQEAIETEAKRCGQHFVSQRWLGGMLTNYKTIKTRINRLHKLYEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +ER+R+KL++ L GIR M +P ++FVVD +E +A+ EA+ L Sbjct: 121 EEDGTFDLLPKKEVSQLEREREKLEKNLGGIRKMNKMPSVLFVVDPKKEYIAVHEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 IP+V +VDTN +PD +D IPGNDD+ R++ L +A A I+ + Sbjct: 181 IPVVGIVDTNCDPDELDIAIPGNDDAIRAVKLLTSTIADAVIEANQGREDSEDV 234 >gi|29376895|ref|NP_816049.1| 30S ribosomal protein S2 [Enterococcus faecalis V583] gi|227519881|ref|ZP_03949930.1| 30S ribosomal protein S2 [Enterococcus faecalis TX0104] gi|227553932|ref|ZP_03983979.1| 30S ribosomal protein S2 [Enterococcus faecalis HH22] gi|229545179|ref|ZP_04433904.1| 30S ribosomal protein S2 [Enterococcus faecalis TX1322] gi|229549427|ref|ZP_04438152.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 29200] gi|255972131|ref|ZP_05422717.1| SSU ribosomal protein S2P [Enterococcus faecalis T1] gi|255975198|ref|ZP_05425784.1| 30S ribosomal protein S2 [Enterococcus faecalis T2] gi|256617044|ref|ZP_05473890.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 4200] gi|256763094|ref|ZP_05503674.1| SSU ribosomal protein S2P [Enterococcus faecalis T3] gi|256853761|ref|ZP_05559126.1| ribosomal protein S2 [Enterococcus faecalis T8] gi|256956678|ref|ZP_05560849.1| SSU ribosomal protein S2P [Enterococcus faecalis DS5] gi|256961305|ref|ZP_05565476.1| 30S ribosomal protein S2 [Enterococcus faecalis Merz96] gi|256963567|ref|ZP_05567738.1| 30S ribosomal protein S2 [Enterococcus faecalis HIP11704] gi|257079633|ref|ZP_05573994.1| 30S ribosomal protein S2P [Enterococcus faecalis JH1] gi|257084572|ref|ZP_05578933.1| 30S ribosomal protein S2 [Enterococcus faecalis Fly1] gi|257087432|ref|ZP_05581793.1| 30S ribosomal protein S2 [Enterococcus faecalis D6] gi|257416639|ref|ZP_05593633.1| SSU ribosomal protein S2P [Enterococcus faecalis AR01/DG] gi|257419855|ref|ZP_05596849.1| 30S ribosomal protein S2P [Enterococcus faecalis T11] gi|257421956|ref|ZP_05598946.1| 30S ribosomal protein S2 [Enterococcus faecalis X98] gi|293383590|ref|ZP_06629500.1| ribosomal protein S2 [Enterococcus faecalis R712] gi|293387297|ref|ZP_06631854.1| ribosomal protein S2 [Enterococcus faecalis S613] gi|294780913|ref|ZP_06746267.1| ribosomal protein S2 [Enterococcus faecalis PC1.1] gi|300860866|ref|ZP_07106953.1| ribosomal protein S2 [Enterococcus faecalis TUSoD Ef11] gi|307270844|ref|ZP_07552131.1| ribosomal protein S2 [Enterococcus faecalis TX4248] gi|307271506|ref|ZP_07552778.1| ribosomal protein S2 [Enterococcus faecalis TX0855] gi|307277166|ref|ZP_07558270.1| ribosomal protein S2 [Enterococcus faecalis TX2134] gi|307285817|ref|ZP_07565951.1| ribosomal protein S2 [Enterococcus faecalis TX0860] gi|307287720|ref|ZP_07567763.1| ribosomal protein S2 [Enterococcus faecalis TX0109] gi|307290548|ref|ZP_07570460.1| ribosomal protein S2 [Enterococcus faecalis TX0411] gi|312899830|ref|ZP_07759149.1| ribosomal protein S2 [Enterococcus faecalis TX0470] gi|312906140|ref|ZP_07765152.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 512] gi|312909485|ref|ZP_07768340.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 516] gi|312953480|ref|ZP_07772320.1| ribosomal protein S2 [Enterococcus faecalis TX0102] gi|38258304|sp|Q831U9|RS2_ENTFA RecName: Full=30S ribosomal protein S2 gi|29344360|gb|AAO82119.1| ribosomal protein S2 [Enterococcus faecalis V583] gi|227072675|gb|EEI10638.1| 30S ribosomal protein S2 [Enterococcus faecalis TX0104] gi|227176918|gb|EEI57890.1| 30S ribosomal protein S2 [Enterococcus faecalis HH22] gi|229305664|gb|EEN71660.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 29200] gi|229309724|gb|EEN75711.1| 30S ribosomal protein S2 [Enterococcus faecalis TX1322] gi|255963149|gb|EET95625.1| SSU ribosomal protein S2P [Enterococcus faecalis T1] gi|255968070|gb|EET98692.1| 30S ribosomal protein S2 [Enterococcus faecalis T2] gi|256596571|gb|EEU15747.1| 30S ribosomal protein S2 [Enterococcus faecalis ATCC 4200] gi|256684345|gb|EEU24040.1| SSU ribosomal protein S2P [Enterococcus faecalis T3] gi|256710704|gb|EEU25747.1| ribosomal protein S2 [Enterococcus faecalis T8] gi|256947174|gb|EEU63806.1| SSU ribosomal protein S2P [Enterococcus faecalis DS5] gi|256951801|gb|EEU68433.1| 30S ribosomal protein S2 [Enterococcus faecalis Merz96] gi|256954063|gb|EEU70695.1| 30S ribosomal protein S2 [Enterococcus faecalis HIP11704] gi|256987663|gb|EEU74965.1| 30S ribosomal protein S2P [Enterococcus faecalis JH1] gi|256992602|gb|EEU79904.1| 30S ribosomal protein S2 [Enterococcus faecalis Fly1] gi|256995462|gb|EEU82764.1| 30S ribosomal protein S2 [Enterococcus faecalis D6] gi|257158467|gb|EEU88427.1| SSU ribosomal protein S2P [Enterococcus faecalis ARO1/DG] gi|257161683|gb|EEU91643.1| 30S ribosomal protein S2P [Enterococcus faecalis T11] gi|257163780|gb|EEU93740.1| 30S ribosomal protein S2 [Enterococcus faecalis X98] gi|291079102|gb|EFE16466.1| ribosomal protein S2 [Enterococcus faecalis R712] gi|291083334|gb|EFE20297.1| ribosomal protein S2 [Enterococcus faecalis S613] gi|294452039|gb|EFG20487.1| ribosomal protein S2 [Enterococcus faecalis PC1.1] gi|295113455|emb|CBL32092.1| ribosomal protein S2, bacterial type [Enterococcus sp. 7L76] gi|300849905|gb|EFK77655.1| ribosomal protein S2 [Enterococcus faecalis TUSoD Ef11] gi|306498403|gb|EFM67908.1| ribosomal protein S2 [Enterococcus faecalis TX0411] gi|306501458|gb|EFM70761.1| ribosomal protein S2 [Enterococcus faecalis TX0109] gi|306502578|gb|EFM71845.1| ribosomal protein S2 [Enterococcus faecalis TX0860] gi|306506096|gb|EFM75262.1| ribosomal protein S2 [Enterococcus faecalis TX2134] gi|306511778|gb|EFM80776.1| ribosomal protein S2 [Enterococcus faecalis TX0855] gi|306512757|gb|EFM81402.1| ribosomal protein S2 [Enterococcus faecalis TX4248] gi|310627786|gb|EFQ11069.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 512] gi|310628689|gb|EFQ11972.1| ribosomal protein S2 [Enterococcus faecalis TX0102] gi|311290158|gb|EFQ68714.1| ribosomal protein S2 [Enterococcus faecalis DAPTO 516] gi|311293080|gb|EFQ71636.1| ribosomal protein S2 [Enterococcus faecalis TX0470] gi|315025413|gb|EFT37345.1| ribosomal protein S2 [Enterococcus faecalis TX2137] gi|315030222|gb|EFT42154.1| ribosomal protein S2 [Enterococcus faecalis TX4000] gi|315032892|gb|EFT44824.1| ribosomal protein S2 [Enterococcus faecalis TX0017] gi|315035623|gb|EFT47555.1| ribosomal protein S2 [Enterococcus faecalis TX0027] gi|315144759|gb|EFT88775.1| ribosomal protein S2 [Enterococcus faecalis TX2141] gi|315146676|gb|EFT90692.1| ribosomal protein S2 [Enterococcus faecalis TX4244] gi|315150160|gb|EFT94176.1| ribosomal protein S2 [Enterococcus faecalis TX0012] gi|315152147|gb|EFT96163.1| ribosomal protein S2 [Enterococcus faecalis TX0031] gi|315155334|gb|EFT99350.1| ribosomal protein S2 [Enterococcus faecalis TX0043] gi|315159090|gb|EFU03107.1| ribosomal protein S2 [Enterococcus faecalis TX0312] gi|315161683|gb|EFU05700.1| ribosomal protein S2 [Enterococcus faecalis TX0645] gi|315164819|gb|EFU08836.1| ribosomal protein S2 [Enterococcus faecalis TX1302] gi|315166406|gb|EFU10423.1| ribosomal protein S2 [Enterococcus faecalis TX1341] gi|315170303|gb|EFU14320.1| ribosomal protein S2 [Enterococcus faecalis TX1342] gi|315574367|gb|EFU86558.1| ribosomal protein S2 [Enterococcus faecalis TX0309B] gi|315580158|gb|EFU92349.1| ribosomal protein S2 [Enterococcus faecalis TX0309A] gi|323481390|gb|ADX80829.1| ribosomal protein S2 [Enterococcus faecalis 62] gi|327535686|gb|AEA94520.1| 30S ribosomal protein S2 [Enterococcus faecalis OG1RF] gi|329572244|gb|EGG53904.1| ribosomal protein S2 [Enterococcus faecalis TX1467] Length = 261 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 104/267 (38%), Positives = 161/267 (60%), Gaps = 7/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 61 AEEGGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 121 EEDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G G D + Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQ------GEDQATEE 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 V + E +EE E + + Sbjct: 235 LFVEETPEATSIEEIVDVVEGNNESAE 261 >gi|332095210|gb|EGJ00239.1| ribosomal protein S2 [Shigella boydii 5216-82] Length = 236 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 160/236 (67%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQSEESFVEAE 236 >gi|288870964|ref|ZP_06115941.2| ribosomal protein S2 [Clostridium hathewayi DSM 13479] gi|288865240|gb|EFC97538.1| ribosomal protein S2 [Clostridium hathewayi DSM 13479] Length = 269 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 97/246 (39%), Positives = 156/246 (63%), Gaps = 1/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ++D Sbjct: 24 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVVKVDEAYKAVADI 83 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E + Sbjct: 84 AAEGGKILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKQIETM 143 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ +QEA L Sbjct: 144 SEDGTFDVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHTLG 203 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ + + A+ Sbjct: 204 IPLIGIADTNCDPEELDFVIPGNDDAIRAVKLIVSKMADAVIEANQGEATAEEAEAAQDF 263 Query: 242 ETVVHS 247 E V + Sbjct: 264 EEAVEA 269 >gi|330894592|gb|EGH27253.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. mori str. 301020] Length = 247 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 109/225 (48%), Positives = 149/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FVVD + E++AI EA +L Sbjct: 121 SEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVVDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|315173663|gb|EFU17680.1| ribosomal protein S2 [Enterococcus faecalis TX1346] Length = 261 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 104/267 (38%), Positives = 161/267 (60%), Gaps = 7/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 61 AEEGGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 121 EEDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G G D + Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQ------GEDKATEE 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 V + E +EE E + + Sbjct: 235 LFVEETPEATSIEEIVDVVEGNNESAE 261 >gi|157164805|ref|YP_001467386.1| 30S ribosomal protein S2 [Campylobacter concisus 13826] gi|166225253|sp|A7ZF28|RS2_CAMC1 RecName: Full=30S ribosomal protein S2 gi|112801952|gb|EAT99296.1| ribosomal protein S2 [Campylobacter concisus 13826] Length = 262 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 119/265 (44%), Positives = 167/265 (63%), Gaps = 5/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A Sbjct: 2 VTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA D + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + Sbjct: 62 GKSVLFVGTKKQAIDAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL L GIR+M LPD++FVVDT +EK+A+QEA RL+IP+ Sbjct: 122 GSINLLTKKEALMLRRKKEKLIATLGGIRNMKSLPDMIFVVDTVKEKIAVQEANRLKIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VDY IPGNDD+ RS+ LFC +A A +G + G ++AGE V Sbjct: 182 VAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEGKSLLEQDGG--EQAAGEEV 239 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 ++ + E SE + +E Sbjct: 240 SQDEKDAVVAE--AMSEEDFGEDEE 262 >gi|25028471|ref|NP_738525.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] gi|259507530|ref|ZP_05750430.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] gi|38258379|sp|Q8FP70|RS2_COREF RecName: Full=30S ribosomal protein S2 gi|23493756|dbj|BAC18725.1| putative 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] gi|259164915|gb|EEW49469.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314] Length = 276 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 109/248 (43%), Positives = 169/248 (68%), Gaps = 3/248 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDQAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQEAVQVEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ +G TK+E L + R+R KL+R L GI DM +P ++++DTN+E +A+ EA +L Sbjct: 121 DAAEDGYEGRTKRETLMLTRERVKLERVLSGIADMSRIPSALWIIDTNKEHIAVAEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP+VA++DTN +PD+VDY +PGNDD+ R+ AL ++++A +G AR+ + A ++ Sbjct: 181 NIPVVAILDTNCDPDVVDYPVPGNDDAIRATALLSRVISTAVEEGKKAREERQLAAAREA 240 Query: 240 AGETVVHS 247 AGE Sbjct: 241 AGEPKSED 248 >gi|295098662|emb|CBK87752.1| SSU ribosomal protein S2P [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 236 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 113/236 (47%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ DKL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVSLYLSAVAATVREGRSQDLASQAEESFVEAE 236 >gi|149190033|ref|ZP_01868310.1| 30S ribosomal protein S2 [Vibrio shilonii AK1] gi|148836063|gb|EDL53023.1| 30S ribosomal protein S2 [Vibrio shilonii AK1] Length = 243 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 161/243 (66%), Gaps = 1/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALAELAKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA + Q+ VN++WLGGM+TN+KTV QSI++L+D E Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAINADQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L Sbjct: 121 AQDGTFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDYVIPGNDD+ R++ L+ + A A +G + + + Sbjct: 181 IPVFAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADAVKEGRNKDVAAVADKDGFVE 240 Query: 242 ETV 244 E Sbjct: 241 EAE 243 >gi|304396644|ref|ZP_07378525.1| ribosomal protein S2 [Pantoea sp. aB] gi|304356153|gb|EFM20519.1| ribosomal protein S2 [Pantoea sp. aB] Length = 241 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 110/236 (46%), Positives = 157/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+IL V TK A+ V E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILIVGTKRAAAQAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FVVD + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + + Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVNLYLTAVATTVREGRSQDLAEQAEEA 236 >gi|218562794|ref|YP_002344573.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|25009226|sp|Q9PNB3|RS2_CAMJE RecName: Full=30S ribosomal protein S2 gi|112360500|emb|CAL35297.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 263 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 113/264 (42%), Positives = 166/264 (62%), Gaps = 9/264 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEAL 233 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 V+ ++ + EE + + ++ + Sbjct: 234 VNEEKEITDEEKKEVLDEAMSEED 257 >gi|260767825|ref|ZP_05876760.1| SSU ribosomal protein S2p (SAe) [Vibrio furnissii CIP 102972] gi|260617334|gb|EEX42518.1| SSU ribosomal protein S2p (SAe) [Vibrio furnissii CIP 102972] gi|315179345|gb|ADT86259.1| 30S ribosomal protein S2 [Vibrio furnissii NCTC 11218] Length = 242 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VD+VIPGNDD+ R++ L+ + VA + +G + + + Sbjct: 181 IPVFAVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAVAESVNEGRNKDVAAVADKDGFVE 240 >gi|291536035|emb|CBL09147.1| SSU ribosomal protein S2P [Roseburia intestinalis M50/1] Length = 247 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 98/247 (39%), Positives = 159/247 (64%), Gaps = 2/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN++T+ I +L+++E + Sbjct: 61 AAAGGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFRTIQSRIARLKEIETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ IQEA L Sbjct: 121 ATDGTFEVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICIQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKSA 240 I ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + + A++ +A Sbjct: 181 IKLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQGAEMTAEEAESVAA 240 Query: 241 GETVVHS 247 E V + Sbjct: 241 DEAVEEA 247 >gi|229174493|ref|ZP_04302025.1| 30S ribosomal protein S2 [Bacillus cereus MM3] gi|228609053|gb|EEK66343.1| 30S ribosomal protein S2 [Bacillus cereus MM3] Length = 228 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 156/224 (69%), Gaps = 1/224 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E++ + Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIEKMQEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI+ Sbjct: 121 FEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPIIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 224 >gi|160933258|ref|ZP_02080647.1| hypothetical protein CLOLEP_02104 [Clostridium leptum DSM 753] gi|156868332|gb|EDO61704.1| hypothetical protein CLOLEP_02104 [Clostridium leptum DSM 753] Length = 248 Score = 315 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 107/248 (43%), Positives = 156/248 (62%), Gaps = 8/248 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A I + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVRKLEEAYNFIREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA D V E A+R+ Y VN++WLGGMMTN+ T+ I +LR L + Sbjct: 61 SENGESVLFVGTKKQAQDSVREEAERAGAYFVNARWLGGMMTNFTTIRHRIDRLRQLRAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ + +KL++ + GI+DM LP +F+VD +E++A+ EA++L Sbjct: 121 EEDGTFDLLPKKEVIKLKLEIEKLEKFMGGIKDMKKLPGALFIVDPRKERIAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS-------YMG 234 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A+A I+G Q Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISATMANAIIEGREGQMGAEEAEAKENE 240 Query: 235 ADTKSAGE 242 D ++A E Sbjct: 241 TDEEAAAE 248 >gi|257082021|ref|ZP_05576382.1| 30S ribosomal protein S2 [Enterococcus faecalis E1Sol] gi|256990051|gb|EEU77353.1| 30S ribosomal protein S2 [Enterococcus faecalis E1Sol] Length = 261 Score = 315 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 104/267 (38%), Positives = 161/267 (60%), Gaps = 7/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 61 AEEGGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 121 EEDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G G D + Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQ------GEDQATEE 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 V + E +EE E + + Sbjct: 235 LFVEETLEATSIEEIVDVVEGNNESAE 261 >gi|312966304|ref|ZP_07780530.1| ribosomal protein S2 [Escherichia coli 2362-75] gi|116667411|pdb|2GY9|B Chain B, Structure Of The 30s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667463|pdb|2GYB|B Chain B, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|312289547|gb|EFR17441.1| ribosomal protein S2 [Escherichia coli 2362-75] gi|323190432|gb|EFZ75707.1| ribosomal protein S2 [Escherichia coli RN587/1] gi|327255147|gb|EGE66750.1| ribosomal protein S2 [Escherichia coli STEC_7v] gi|332098196|gb|EGJ03169.1| ribosomal protein S2 [Shigella dysenteriae 155-74] Length = 236 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 160/236 (67%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 236 >gi|291278484|ref|YP_003495319.1| 30S ribosomal protein S2 [Deferribacter desulfuricans SSM1] gi|290753186|dbj|BAI79563.1| 30S ribosomal protein S2 [Deferribacter desulfuricans SSM1] Length = 269 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 103/248 (41%), Positives = 163/248 (65%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +I+ LLE+GV FGH+ WNPKM++Y+F ++N +IIDL +TV +A + I D Sbjct: 1 MSYISIKNLLEAGVHFGHQTKRWNPKMQKYVFGKKNGIYIIDLQKTVQCFNQAYEFIRDM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA + + EAA++ + VN++WLGG +TN+ T+ IQ+L++LEE+ Sbjct: 61 VKGGASVLFVGTKKQAQEAIKEAAEKCQSFYVNNRWLGGTLTNFNTIKTRIQRLKELEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + + +TKKE ++R+ +KLK+ L GI+DM +PD++F++D RE A+ EAR+L Sbjct: 121 FNSDYIKNYTKKEAARLKREYEKLKKNLYGIKDMQEIPDILFIIDIKREMNAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +PIVA+VDTN +PDLVD+ IPGNDD+ R+ L +A A ++G + + + ++A Sbjct: 181 LPIVAIVDTNCDPDLVDFPIPGNDDAIRACQLIAGRIADAVLEGKQLREEELLEEVRAAA 240 Query: 242 ETVVHSKE 249 + Sbjct: 241 NQNEEDDD 248 >gi|254281535|ref|ZP_04956503.1| ribosomal protein S2 [gamma proteobacterium NOR51-B] gi|219677738|gb|EED34087.1| ribosomal protein S2 [gamma proteobacterium NOR51-B] Length = 282 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 111/236 (47%), Positives = 150/236 (63%), Gaps = 1/236 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + Q ++R LL++G FGH+ WNPKM++YIF RN HII+L TVP AL + Sbjct: 20 MIMSQVSMRDLLQAGAHFGHQTRFWNPKMDQYIFGARNKIHIINLEHTVPAFNDALNHVK 79 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +ILFV TK A + E A R V+ +WLGGM+TN+KT+ SI++ RDLE Sbjct: 80 KLAGNKNQILFVGTKRAAGKIIEENATRCGMPYVSHRWLGGMLTNYKTIRSSIKRYRDLE 139 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + + TKKE L R +DKL+R++ GI+DMGGLPD +FV+D + E++AI EA + Sbjct: 140 EQEKDGTLEKLTKKEALMRTRTKDKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANK 199 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 L IP++ +VDTNSNPD VDYVIPGNDD+ R+I L+ VA A I+G Sbjct: 200 LGIPVIGIVDTNSNPDGVDYVIPGNDDAIRAIKLYVKAVADAVIEGKGESGEAAPV 255 >gi|163750351|ref|ZP_02157591.1| 30S ribosomal protein S2 [Shewanella benthica KT99] gi|161329841|gb|EDQ00827.1| 30S ribosomal protein S2 [Shewanella benthica KT99] Length = 242 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + E+A QY V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ KL R+L GI++MGGLPD++FV+ + E +A++EA L Sbjct: 121 SIDGTFDKLTKKEALMRTRELAKLDRSLGGIKNMGGLPDVLFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTNSNPD ++Y+IPGNDD+ RSI L+ + VA+A G + + Sbjct: 181 IPVVAIVDTNSNPDGINYIIPGNDDAMRSIRLYTESVAAAVKAGRGQDLAIQAEQDGFVE 240 >gi|323160213|gb|EFZ46172.1| ribosomal protein S2 [Escherichia coli E128010] Length = 236 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 112/236 (47%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 236 >gi|309389216|gb|ADO77096.1| SSU ribosomal protein S2P [Halanaerobium praevalens DSM 2228] Length = 244 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 107/243 (44%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLESGV FGH+ WNPKM++YIF ERN +IIDL QTV ++ KA + D Sbjct: 1 MSVVNMKQLLESGVHFGHQTKRWNPKMKQYIFTERNGIYIIDLQQTVKLIDKAYNFVKDQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA + V A + VN +WLGGM+TN+KT+ + I +L ++E++ Sbjct: 61 AAEGKNVLFVGTKRQAQETVKNEAIKCGMPYVNQRWLGGMLTNYKTIKKRIDRLEEIEQM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + + ++ DKL+R L GIRDM GLPDL+F+ D +E +A+ EAR+L Sbjct: 121 EEEGIFEVLPKKEVIELNKEHDKLERFLGGIRDMNGLPDLIFITDARKEDIAVSEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIV+++DTN +PDL+DYVIPGNDD+ R++ L +++ A + G + K+ Sbjct: 181 IPIVSILDTNCDPDLIDYVIPGNDDAIRAVKLITSVISDAVLAGKQGKQEAEARKAKAEE 240 Query: 242 ETV 244 +T Sbjct: 241 KTA 243 >gi|228940915|ref|ZP_04103474.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954103|ref|ZP_04116132.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960043|ref|ZP_04121707.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228973844|ref|ZP_04134420.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|229025267|ref|ZP_04181687.1| 30S ribosomal protein S2 [Bacillus cereus AH1272] gi|229031457|ref|ZP_04187457.1| 30S ribosomal protein S2 [Bacillus cereus AH1271] gi|229104389|ref|ZP_04235058.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-28] gi|229117313|ref|ZP_04246691.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-3] gi|229162763|ref|ZP_04290720.1| 30S ribosomal protein S2 [Bacillus cereus R309803] gi|228620645|gb|EEK77514.1| 30S ribosomal protein S2 [Bacillus cereus R309803] gi|228666213|gb|EEL21677.1| 30S ribosomal protein S2 [Bacillus cereus Rock1-3] gi|228679087|gb|EEL33295.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-28] gi|228729746|gb|EEL80726.1| 30S ribosomal protein S2 [Bacillus cereus AH1271] gi|228736020|gb|EEL86595.1| 30S ribosomal protein S2 [Bacillus cereus AH1272] gi|228785869|gb|EEM33872.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228799559|gb|EEM46512.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805669|gb|EEM52259.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228818751|gb|EEM64817.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 228 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERMQEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI+ Sbjct: 121 FEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPIIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 224 >gi|327441024|dbj|BAK17389.1| ribosomal protein S2 [Solibacillus silvestris StLB046] Length = 240 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 95/226 (42%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+RS Y +N +WLGG +TN+ T+ + +++++D+E++ Sbjct: 61 GQDGGKVLFVGTKKQAQEAIKEEAERSGNYYINQRWLGGTLTNFGTIQKRVKRMKDIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ ++L + L GIRDM +PD+MFVVD +E++A+ EA +L Sbjct: 121 EEDGTFAVLPKKEVIQLKKEHERLVKFLGGIRDMKAIPDVMFVVDPRKERIAVAEAIKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+V +VDTN +PD +DYVIP NDD+ R++ L +A A ++ Sbjct: 181 IPLVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALLEAKQ 226 >gi|269219625|ref|ZP_06163479.1| ribosomal protein S2 [Actinomyces sp. oral taxon 848 str. F0332] gi|269210867|gb|EEZ77207.1| ribosomal protein S2 [Actinomyces sp. oral taxon 848 str. F0332] Length = 296 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 110/229 (48%), Positives = 157/229 (68%), Gaps = 2/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++RQLLE+GV FGH+ WNPKM+RYI ERN+ +IIDL +T+ + + + T Sbjct: 1 MAVVSMRQLLEAGVHFGHQTRRWNPKMKRYILTERNSIYIIDLQKTLVDIDRTFDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILF+ TK QA + V E A+R VN +WLGGM+TN+ TV++ +Q+LR+LE+ Sbjct: 61 VAHGGTILFIGTKKQAQEAVREQAERVGMPYVNQRWLGGMLTNFSTVAKRLQRLRELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++DKL+R L GIRDM +P ++VVDT +E LA+ EA++L Sbjct: 121 DFDDVASSGRTKKELLMMRREKDKLERTLGGIRDMARVPSAVWVVDTKKEHLAVAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+VA++DTN +PD V Y IPGNDDS S+ L +VA A +G+ + Sbjct: 181 DIPVVAILDTNCDPDEVTYPIPGNDDSIGSVGLLTRVVADAVAEGLVSR 229 >gi|225573975|ref|ZP_03782620.1| hypothetical protein RUMHYD_02071 [Blautia hydrogenotrophica DSM 10507] gi|225038776|gb|EEG49022.1| hypothetical protein RUMHYD_02071 [Blautia hydrogenotrophica DSM 10507] Length = 259 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 97/224 (43%), Positives = 147/224 (65%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL Q+V M+ A ++D Sbjct: 12 MGVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 72 VADGGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIGRLKEIEAM 131 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ KL++ L GI++M +PD +FVVD +E++ +QEA L Sbjct: 132 EADGTFDVLPKKEVIELRKEMAKLQKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHSLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 192 IPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 235 >gi|253752631|ref|YP_003025772.1| 30S ribosomal protein S2 [Streptococcus suis SC84] gi|253754457|ref|YP_003027598.1| 30S ribosomal protein S2 [Streptococcus suis P1/7] gi|253756390|ref|YP_003029530.1| 30S ribosomal protein S2 [Streptococcus suis BM407] gi|330833591|ref|YP_004402416.1| 30S ribosomal protein S2 [Streptococcus suis ST3] gi|209573685|sp|A4W453|RS2_STRS2 RecName: Full=30S ribosomal protein S2 gi|251816920|emb|CAZ52569.1| 30S ribosomal protein S2 [Streptococcus suis SC84] gi|251818854|emb|CAZ56697.1| 30S ribosomal protein S2 [Streptococcus suis BM407] gi|251820703|emb|CAR47465.1| 30S ribosomal protein S2 [Streptococcus suis P1/7] gi|319759047|gb|ADV70989.1| 30S ribosomal protein S2 [Streptococcus suis JS14] gi|329307814|gb|AEB82230.1| 30S ribosomal protein S2 [Streptococcus suis ST3] Length = 258 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 163/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--- 238 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGNQGEDSVAAVEAELAA 240 Query: 239 -----SAGETVVHSKEG 250 + E +V EG Sbjct: 241 EPASTESIEELVEVVEG 257 >gi|332711199|ref|ZP_08431132.1| SSU ribosomal protein S2P [Lyngbya majuscula 3L] gi|332350013|gb|EGJ29620.1| SSU ribosomal protein S2P [Lyngbya majuscula 3L] Length = 279 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 139/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ ++LESGV FGH+ WNPKM+ YI+ RN HIIDL QT +++ A I + Sbjct: 1 MPVVSLAEMLESGVHFGHQTRRWNPKMDPYIYTARNGVHIIDLVQTAQLMEDAYHYIRTS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R Y VN +WLGGM+TNW+T+ +++L+DLE Sbjct: 61 SEQGKRFLFVGTKRQAAGIIAQEASRCGAYYVNQRWLGGMLTNWETIKTRVERLKDLERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD++ ++D RE AI E +L Sbjct: 121 ETSGALDLLPKKEGSMLRRELGKLQKYLGGIKMMRKVPDIVIIIDQKREYNAILECEKLS 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +PIV+++DTN +PDL D IP NDD+ RSI L +A A +G + Sbjct: 181 LPIVSLLDTNCDPDLADIPIPANDDAIRSIKLIIGKLADAIYEGRHGE 228 >gi|116627032|ref|YP_819651.1| 30S ribosomal protein S2 [Streptococcus thermophilus LMD-9] gi|122268363|sp|Q03MW7|RS2_STRTD RecName: Full=30S ribosomal protein S2 gi|116100309|gb|ABJ65455.1| SSU ribosomal protein S2P [Streptococcus thermophilus LMD-9] Length = 255 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 167/253 (66%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M+ A + + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMVDTAYEFVREA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V E A R+ QY +N +WLGG +TNW T+ + I +L++++++ Sbjct: 61 AANDAVILFVGTKKQAAEAVAEEATRAGQYYINHRWLGGTLTNWNTIKKRIARLKEIKQM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L Sbjct: 121 EADGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVIYIVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + +A Sbjct: 181 IPVVAMVDTNADPDEIDVIIPANDDAIRAVKLITSKMADAIIEGKQGEDASVDFQEAAAA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|258545338|ref|ZP_05705572.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826] gi|258519441|gb|EEV88300.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826] Length = 259 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 121/259 (46%), Positives = 164/259 (63%), Gaps = 1/259 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R+L E+G FGHR WNPKM YI+ +R + HII+L +TVPML AL + Sbjct: 1 MSKVSMRELFEAGAHFGHRTRFWNPKMAPYIYGKRGDIHIINLEKTVPMLNDALNFVGTV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ++FV TK AS+ V EAA R VN +WLGGMMTN+KT+ QSI +L +E + Sbjct: 61 VANGGSVMFVGTKRSASEAVGEAAARCGMPYVNFRWLGGMMTNFKTIRQSINRLEAIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + Q KKE + + R+RDKL R+L GIR+M LPD++FV+D E +AIQEA++L Sbjct: 121 AEDGTFQKLVKKEVIVLGRERDKLARSLTGIRNMRRLPDVLFVIDVGHEHIAIQEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTNS + VDY+IPGNDDS R+I L+ D VASA + A + G + + A Sbjct: 181 IPVVGVVDTNSQLEGVDYIIPGNDDSVRAIRLYVDAVASAIEEAKASVTARGGENAEKAL 240 Query: 242 ETVVHSKEGMQLEEDSQSS 260 E V E E + Sbjct: 241 EEAVAVDEPATPAESGDAE 259 >gi|157372025|ref|YP_001480014.1| 30S ribosomal protein S2 [Serratia proteamaculans 568] gi|167011238|sp|A8GIE6|RS2_SERP5 RecName: Full=30S ribosomal protein S2 gi|157323789|gb|ABV42886.1| ribosomal protein S2 [Serratia proteamaculans 568] Length = 241 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 112/241 (46%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMANAALAELTKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSRKGKILFVGTKRAASEAVKEYATGCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNS+PD VD++IPGNDD+ R+I L+ VA+A +G ++ + ++ Sbjct: 181 IPVFSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLTAVAAAVREGRSQDLAVQAEESFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|54310084|ref|YP_131104.1| 30S ribosomal protein S2 [Photobacterium profundum SS9] gi|61215567|sp|Q6LN24|RS2_PHOPR RecName: Full=30S ribosomal protein S2 gi|46914523|emb|CAG21302.1| putative 30S ribosomal protein S2 [Photobacterium profundum SS9] Length = 242 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 114/242 (47%), Positives = 158/242 (65%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I+ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEINKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G++LFV TK AS+ V E+A QY VN++WLGGM+TNWKTV QSI++L++LE Sbjct: 61 AARKGKVLFVGTKRAASESVKESAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKELEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI++MGGLPD MFV+D + E +AI+EA L Sbjct: 121 SADGTFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ ++VDTNSNPD VD+VIPGNDD+ RSI L+ VA + + Sbjct: 181 IPVFSIVDTNSNPDGVDFVIPGNDDAIRSIQLYTGAVAQTVTEARNQDIVVQAEQDGFVA 240 Query: 242 ET 243 E Sbjct: 241 EA 242 >gi|116513100|ref|YP_812007.1| 30S ribosomal protein S2 [Lactococcus lactis subsp. cremoris SK11] gi|123025098|sp|Q02VX8|RS2_LACLS RecName: Full=30S ribosomal protein S2 gi|116108754|gb|ABJ73894.1| SSU ribosomal protein S2P [Lactococcus lactis subsp. cremoris SK11] Length = 255 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 93/231 (40%), Positives = 153/231 (66%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN H+IDL +T ++ A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIHVIDLQKTEKLVDDAYNYVKNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA++ V E A R+ QY VN +WLGGM+TNW T+ + +L+++ ++ Sbjct: 61 SQEGAVVLFVGTKKQAAEAVKEEALRAGQYYVNHRWLGGMLTNWNTIQTRVTRLKEINKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++R++L++ + GI DM +PD+M++VD + E++A++EA+ L Sbjct: 121 EEEGTFEVLPKKEVVLLNKERERLEKFIGGIADMPRIPDVMYIVDPHAEQIAVKEAKTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+VA+VDTN++P+ +D VIP NDD+ R++ L +A A I+G + + Sbjct: 181 IPVVAMVDTNADPEPIDVVIPANDDAIRAVKLITAKMADAIIEGRQGEDAA 231 >gi|172040498|ref|YP_001800212.1| 30S ribosomal protein S2 [Corynebacterium urealyticum DSM 7109] gi|238054500|sp|B1VG89|RS2_CORU7 RecName: Full=30S ribosomal protein S2 gi|171851802|emb|CAQ04778.1| 30S ribosomal protein S2 [Corynebacterium urealyticum DSM 7109] Length = 269 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 158/225 (70%), Gaps = 2/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGNILFVGTKKQAQEAVANEAERVGMPYVNHRWLGGMLTNFQTVSKRLARMKELQAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ QG TKKE L + R+R+KL+R L GI DM +P M+VVDTN+E +A+ EA++L Sbjct: 121 DAAEDGYQGRTKKEILLLNREREKLERVLGGIADMTKVPSAMWVVDTNKEHIAVSEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA++DTN +PD V Y +PGNDD+ RS L +++SA +G Sbjct: 181 GIPVVAILDTNCDPDEVQYPVPGNDDAIRSANLLTSIISSAVEEG 225 >gi|91775883|ref|YP_545639.1| SSU ribosomal protein S2P [Methylobacillus flagellatus KT] gi|122985511|sp|Q1H139|RS2_METFK RecName: Full=30S ribosomal protein S2 gi|91709870|gb|ABE49798.1| SSU ribosomal protein S2P [Methylobacillus flagellatus KT] Length = 249 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM YIF ERN HII+L +T+P+ + AL+ + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGERNKIHIINLEKTLPLFEDALKYVRQLSA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 GRILFV TK QA D + E A+R+ VN +WLGGM+TN+KTV QSI++L + E LL Sbjct: 62 NKGRILFVGTKRQARDIIKEEAQRAGCPYVNHRWLGGMLTNFKTVKQSIKRLTEYEALLQ 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + F KKE L +R+ +KL+R++ GI++MGGLPD +F++D E A+ EA +L IP Sbjct: 122 DGGIEKFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++ VVDTN++P+ V YVIPGNDDSSR+I L+ +A A ++G + Sbjct: 182 VIGVVDTNNSPEGVAYVIPGNDDSSRAIRLYARGIADAVLEGRNQS 227 >gi|332762043|gb|EGJ92314.1| ribosomal protein S2 [Shigella flexneri 2747-71] gi|333009282|gb|EGK28738.1| ribosomal protein S2 [Shigella flexneri K-218] gi|333022193|gb|EGK41432.1| ribosomal protein S2 [Shigella flexneri K-304] Length = 236 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 113/236 (47%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ V+R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIVSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 236 >gi|228916464|ref|ZP_04080030.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928875|ref|ZP_04091907.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935141|ref|ZP_04097968.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947546|ref|ZP_04109836.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228986970|ref|ZP_04147096.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229092867|ref|ZP_04224001.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-42] gi|229123340|ref|ZP_04252544.1| 30S ribosomal protein S2 [Bacillus cereus 95/8201] gi|229157403|ref|ZP_04285481.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 4342] gi|229186066|ref|ZP_04313236.1| 30S ribosomal protein S2 [Bacillus cereus BGSC 6E1] gi|229197937|ref|ZP_04324653.1| 30S ribosomal protein S2 [Bacillus cereus m1293] gi|228585655|gb|EEK43757.1| 30S ribosomal protein S2 [Bacillus cereus m1293] gi|228597485|gb|EEK55135.1| 30S ribosomal protein S2 [Bacillus cereus BGSC 6E1] gi|228626130|gb|EEK82879.1| 30S ribosomal protein S2 [Bacillus cereus ATCC 4342] gi|228660116|gb|EEL15752.1| 30S ribosomal protein S2 [Bacillus cereus 95/8201] gi|228690489|gb|EEL44272.1| 30S ribosomal protein S2 [Bacillus cereus Rock3-42] gi|228772748|gb|EEM21188.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228812066|gb|EEM58397.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824506|gb|EEM70311.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830682|gb|EEM76287.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843043|gb|EEM88125.1| 30S ribosomal protein S2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 228 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 100/224 (44%), Positives = 156/224 (69%), Gaps = 1/224 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A +V+ D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERMQEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI+ Sbjct: 121 FEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPIIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 224 >gi|213964691|ref|ZP_03392891.1| ribosomal protein S2 [Corynebacterium amycolatum SK46] gi|213952884|gb|EEB64266.1| ribosomal protein S2 [Corynebacterium amycolatum SK46] Length = 281 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 112/272 (41%), Positives = 173/272 (63%), Gaps = 3/272 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R+LL++GV FGH+ WNPKM+R+IF ERN +IIDL QT+ + +A + + +T Sbjct: 9 MAVVSMRELLDAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLTYIDEAFEFVKET 68 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + V A+R VN +WLGGM+TN+ TVS+ + +L++L+ + Sbjct: 69 VAHGGNILFVGTKKQAQEAVQNEAERVDMPYVNHRWLGGMLTNFATVSKRLARLKELQAM 128 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EN +G KKE L + R+R KL+R L GIRDM +P +++VDTN+E +A+ EA++L Sbjct: 129 DAAENGYEGRGKKEILMLTRERTKLERTLGGIRDMSKVPSALWIVDTNKEHIAVAEAKKL 188 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA-RQHSYMGADTKS 239 IP+VA++DTN +PD VD+ IPGNDD+ R+ ++ ++++A +G R A ++ Sbjct: 189 GIPVVAILDTNCDPDDVDFPIPGNDDAIRAASVLTRIISTAVEEGRKARAEREANAAREA 248 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 AG+ + S + +E S A Sbjct: 249 AGDAPIESAAENTDQAAEMDAEGSTATETASA 280 >gi|325474922|gb|EGC78108.1| 30S ribosomal protein S2 [Treponema denticola F0402] Length = 291 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 105/276 (38%), Positives = 175/276 (63%), Gaps = 9/276 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + + T Sbjct: 1 MAVVTMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK QA + + A+R + VN++WLGGM+TN+ T+ +S+ +L+ +E++ Sbjct: 61 TSEGKSVLFVGTKKQAQQTIQKEAERCGMFYVNNRWLGGMLTNFSTIKKSLARLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE ++++++ KL++ L GI++M LP ++F++DT +E++AI+EAR L Sbjct: 121 EVDGTFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+AVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A I+ + + + Sbjct: 181 IPIIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIEADNEHGLKIIENLQEDE 240 Query: 242 ETVVHSKEGMQLEEDS--------QSSESSVLDGQE 269 E+ + Q E+ E+S D E Sbjct: 241 ESGDSGVDPYQDREEEITDYSNYTPKDEASGDDEDE 276 >gi|330959199|gb|EGH59459.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 247 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++G FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGCHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE + Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G + Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGRS 226 >gi|323359722|ref|YP_004226118.1| ribosomal protein S2 [Microbacterium testaceum StLB037] gi|323276093|dbj|BAJ76238.1| ribosomal protein S2 [Microbacterium testaceum StLB037] Length = 327 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 119/278 (42%), Positives = 180/278 (64%), Gaps = 7/278 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TIRQLL+SGV FGH+ WNPK++R+I ER+ HIIDL Q++ + KA + + +T Sbjct: 1 MAVVTIRQLLDSGVHFGHQTRRWNPKVKRFILTERSGIHIIDLQQSLGYIDKAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R Q VN +WLGG++TN++TVS+ + ++++LEEL Sbjct: 61 VAHGGTILFVGTKKQAQEVLAEQATRVGQPYVNQRWLGGLLTNFQTVSKRLARMKELEEL 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 N GFTKKE L +R+ DKL ++L GIR++ P ++VVD RE LA+ EA++L Sbjct: 121 DYENPAESGFTKKELLLKKRELDKLHKSLGGIRNLQKTPSAIWVVDAKREHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++ ++DTN++PD Y IPGNDD+ RS++L ++A AA +G+ ++H G D A Sbjct: 181 GIPVIGILDTNADPDEFQYPIPGNDDAIRSVSLLTRIIADAAAEGLIQRHQPAGEDE--A 238 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E + + + +S + E S + +VA + E + Sbjct: 239 AEPLAEWERELL---ESGAPEQSSAETAKVADLAEAKA 273 >gi|315127165|ref|YP_004069168.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas sp. SM9913] gi|315015679|gb|ADT69017.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas sp. SM9913] Length = 242 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 117/226 (51%), Positives = 162/226 (71%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSGA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G++LFV TK AS+ V EAA +S Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AANKGKVLFVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ DKL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMLTREMDKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTNSNPD VDY++PGNDD+ R+I L+ VA+A +G Sbjct: 181 IPVVAIVDTNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEGRE 226 >gi|228992555|ref|ZP_04152482.1| 30S ribosomal protein S2 [Bacillus pseudomycoides DSM 12442] gi|228998603|ref|ZP_04158190.1| 30S ribosomal protein S2 [Bacillus mycoides Rock3-17] gi|229006103|ref|ZP_04163791.1| 30S ribosomal protein S2 [Bacillus mycoides Rock1-4] gi|228755179|gb|EEM04536.1| 30S ribosomal protein S2 [Bacillus mycoides Rock1-4] gi|228761071|gb|EEM10030.1| 30S ribosomal protein S2 [Bacillus mycoides Rock3-17] gi|228767189|gb|EEM15825.1| 30S ribosomal protein S2 [Bacillus pseudomycoides DSM 12442] Length = 228 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A V+ + A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFNVMRNIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERMQEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EAR+L IPI+ Sbjct: 121 FDVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPIIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 224 >gi|86146890|ref|ZP_01065209.1| 30S ribosomal protein S2 [Vibrio sp. MED222] gi|85835342|gb|EAQ53481.1| 30S ribosomal protein S2 [Vibrio sp. MED222] Length = 243 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I+ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEIAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L Sbjct: 121 AQDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VD+VIPGNDD+ R++ L+ + A A +G + + + A+ Sbjct: 181 IPVYAVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAAADAVKEGRNKDVAAVAAEKDGFV 240 Query: 242 ETV 244 E Sbjct: 241 EAE 243 >gi|218710318|ref|YP_002417939.1| 30S ribosomal protein S2 [Vibrio splendidus LGP32] gi|218323337|emb|CAV19514.1| ribosomal protein S2 [Vibrio splendidus LGP32] Length = 254 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I+ Sbjct: 12 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEIAKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 72 GEKKGKVLFVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L Sbjct: 132 AQDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VD+VIPGNDD+ R++ L+ + A A +G + + + A+ Sbjct: 192 IPVYAVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAAADAVKEGRNKDVAAVAAEKDGFV 251 Query: 242 ETV 244 E Sbjct: 252 EAE 254 >gi|258620996|ref|ZP_05716030.1| 30S ribosomal protein S2 [Vibrio mimicus VM573] gi|258586384|gb|EEW11099.1| 30S ribosomal protein S2 [Vibrio mimicus VM573] Length = 289 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 163/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 48 MASVSMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 107 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE Sbjct: 108 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 167 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 168 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 227 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + VA A +G + + + Sbjct: 228 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEAINEGRNKDVAVVAEKDGFVE 287 >gi|71737096|ref|YP_275978.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487084|ref|ZP_05641125.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289626035|ref|ZP_06458989.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651448|ref|ZP_06482791.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str. 2250] gi|298488332|ref|ZP_07006364.1| SSU ribosomal protein S2p (SAe) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123761192|sp|Q48F59|RS2_PSE14 RecName: Full=30S ribosomal protein S2 gi|71557649|gb|AAZ36860.1| ribosomal protein S2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157154|gb|EFH98242.1| SSU ribosomal protein S2p (SAe) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320323120|gb|EFW79209.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str. B076] gi|320329608|gb|EFW85597.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867583|gb|EGH02292.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330878190|gb|EGH12339.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str. race 4] gi|331009281|gb|EGH89337.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 247 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 149/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|260892479|ref|YP_003238576.1| ribosomal protein S2 [Ammonifex degensii KC4] gi|260864620|gb|ACX51726.1| ribosomal protein S2 [Ammonifex degensii KC4] Length = 243 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 154/226 (68%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM YIF +RN +IIDL +T+ L++A + D Sbjct: 1 MAIVTMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTLKKLEEAYYFVRDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG ILFV TK QA + E A R + VN +WLGGM+TN++T+ + I++LR+LEE+ Sbjct: 61 AAQGGTILFVGTKRQAQQTIEEEATRCGMFFVNQRWLGGMLTNFQTIKRRIERLRELEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E +KE + + ++++KL++ G+++M LP +FVVD +EK+A+ EAR+ Sbjct: 121 EANGEIDLRPRKEAMRLRKEKEKLEKYFRGVKNMHSLPSALFVVDPRKEKIAVAEARKKG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ R+I L +A A I+G Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAIRLITSKIADAVIEGRE 226 >gi|284107230|ref|ZP_06386371.1| Ribosomal protein S2 [Candidatus Poribacteria sp. WGA-A3] gi|283829977|gb|EFC34256.1| Ribosomal protein S2 [Candidatus Poribacteria sp. WGA-A3] Length = 269 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 105/258 (40%), Positives = 157/258 (60%), Gaps = 4/258 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I+ +LE+GV FGH+ WNPKM+ Y+F ERN ++IDL QT A + DTVA Sbjct: 9 VSIKDMLEAGVHFGHQTNRWNPKMKPYLFGERNGIYLIDLQQTAKFFFDAYNFVRDTVAA 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G +LFV TK QA D V + A+R Y V +WLGGM+TN++T+ +SI +L+ LE + Sbjct: 69 GESVLFVGTKRQAVDIVEQEAQRCGMYYVTQRWLGGMLTNFETIKKSINQLKKLEAAQTD 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ KKE L +E++R KL++ L GI+ M GLP ++V+DT + + ++EA RL IP+ Sbjct: 129 GTHERLKKKEVLLMEKERGKLEKYLSGIKTMEGLPGCIYVLDTRIQHITVKEANRLGIPV 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN +P +D+ IPGNDD+ RS+ LF +A A ++G+ + D + GE Sbjct: 189 VAIVDTNCDPTRIDFPIPGNDDAIRSLKLFTARIADACLEGLDLRDKQ---DDSAGGEED 245 Query: 245 VHSKEGMQLEEDSQSSES 262 + + ES Sbjct: 246 TLMTDLISARSTESQVES 263 >gi|224582064|ref|YP_002635862.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466591|gb|ACN44421.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|321222200|gb|EFX47272.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323212158|gb|EFZ96982.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] Length = 236 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 114/236 (48%), Positives = 162/236 (68%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEAE 236 >gi|227824519|ref|ZP_03989351.1| 30S ribosomal protein S2 [Acidaminococcus sp. D21] gi|226905018|gb|EEH90936.1| 30S ribosomal protein S2 [Acidaminococcus sp. D21] Length = 243 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 96/225 (42%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++ + + Sbjct: 1 MAIVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEECYNFLREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG++LFV TK QA + E + R+ + VN +WLGGM+TN+KT+ I++L +LE++ Sbjct: 61 AAQGGKVLFVGTKKQAQSAIKEESTRAGMFYVNERWLGGMLTNFKTIQTRIKRLHELEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + + KL++ L GI++M LPD +FV+D +E I EAR+L Sbjct: 121 EEDGTFALLPKKEVIVLRHEMAKLEKYLGGIKEMKKLPDAIFVIDPRKEHNTILEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VA VDTN +PD VDY++P NDD+ R++ L +A A ++G Sbjct: 181 IPVVATVDTNCDPDEVDYLMPANDDAIRAVRLLTSKMADAILEGK 225 >gi|307243338|ref|ZP_07525502.1| ribosomal protein S2 [Peptostreptococcus stomatis DSM 17678] gi|306493285|gb|EFM65274.1| ribosomal protein S2 [Peptostreptococcus stomatis DSM 17678] Length = 253 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 146/226 (64%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV + +A + + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLQKTVKKIDEAYKFMQEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA + + E A+R Y VN +WLGGM+TN KT+ IQKLR+LE + Sbjct: 61 AETGKPILFVGTKKQAQEAIKEEAQRCGMYFVNERWLGGMLTNHKTIKTRIQKLRELEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +++KL++ L G++DM LP +FVVD +E +AIQEA RL Sbjct: 121 EEDGTFDVLPKKEVIKLRAEKEKLEKFLGGVKDMPELPAALFVVDPRKENIAIQEAHRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ VDTN +PD +DY IP NDD+ R++ L +ASA I+ Sbjct: 181 IPVIGTVDTNCDPDEIDYPIPANDDAIRAVKLITGAMASAIIEARQ 226 >gi|148269311|ref|YP_001243771.1| 30S ribosomal protein S2 [Thermotoga petrophila RKU-1] gi|281411991|ref|YP_003346070.1| ribosomal protein S2 [Thermotoga naphthophila RKU-10] gi|147734855|gb|ABQ46195.1| SSU ribosomal protein S2P [Thermotoga petrophila RKU-1] gi|281373094|gb|ADA66656.1| ribosomal protein S2 [Thermotoga naphthophila RKU-10] Length = 260 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 100/226 (44%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + + Sbjct: 1 MAVVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + A+R + VN++WLGG++TN+KT+ I+KL +LEE+ Sbjct: 61 ASEGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIEKLIELEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE+ I R +KL++ L G+++M +PD++++VD +E++A+ EA +L Sbjct: 121 EQSGKLDELPKKEQSRIRRILEKLRKNLGGLKEMRKIPDIIYIVDPRKERIAVAEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A+A ++G Sbjct: 181 IPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIANAYLEGRE 226 >gi|292492488|ref|YP_003527927.1| ribosomal protein S2 [Nitrosococcus halophilus Nc4] gi|291581083|gb|ADE15540.1| ribosomal protein S2 [Nitrosococcus halophilus Nc4] Length = 269 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 111/272 (40%), Positives = 168/272 (61%), Gaps = 9/272 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM YIF +RNN HII+L +T+P+ +A + Sbjct: 1 MANVTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYNEATNFLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK A + + E A+R VN +WLGGM+TN++TV +SI++L DLE + Sbjct: 61 AANKGTVLFVGTKRAAQEAIHEEAERCGMPYVNRRWLGGMLTNFQTVRRSIKRLHDLEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + K+E L + R+RDKL+ +L GI++M LPD +F++D E++A+ EA +L Sbjct: 121 IQDGSLERLKKREALTVRRERDKLENSLGGIKNMTHLPDALFIIDVEHERIAVDEAAKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS+P VDY+IPGNDDS R++ L+ +A A ++ A + + Sbjct: 181 IPVVAVVDTNSSPKKVDYIIPGNDDSIRALRLYARGIADAIVEARATAAATSASKAG--- 237 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVV 273 E +++EE S+ + G E A Sbjct: 238 -----KDEFVEMEEASEGGTAPESLGGEAATA 264 >gi|333011006|gb|EGK30425.1| ribosomal protein S2 [Shigella flexneri K-272] gi|333021801|gb|EGK41050.1| ribosomal protein S2 [Shigella flexneri K-227] Length = 236 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 113/236 (47%), Positives = 161/236 (68%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ V+R G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIVSRKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A Sbjct: 121 FDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 236 >gi|90580971|ref|ZP_01236772.1| 30S ribosomal protein S2 [Vibrio angustum S14] gi|90437849|gb|EAS63039.1| 30S ribosomal protein S2 [Vibrio angustum S14] Length = 242 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 114/242 (47%), Positives = 157/242 (64%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNAALAEIEKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G++LFV TK AS+ + EAA QY VN++WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AARKGKVLFVGTKRAASESIKEAAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD MFV+ + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIGADCEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VD+VIPGNDD+ R+I L+ VA + + + + Sbjct: 181 IPVFAVVDTNSDPDGVDFVIPGNDDAIRAIQLYTGAVAQTVKEARNQDIAVQAEEDGFVA 240 Query: 242 ET 243 E Sbjct: 241 EA 242 >gi|257090592|ref|ZP_05584953.1| 30S ribosomal protein S2P [Enterococcus faecalis CH188] gi|312905122|ref|ZP_07764243.1| ribosomal protein S2 [Enterococcus faecalis TX0635] gi|256999404|gb|EEU85924.1| 30S ribosomal protein S2P [Enterococcus faecalis CH188] gi|310631512|gb|EFQ14795.1| ribosomal protein S2 [Enterococcus faecalis TX0635] gi|315579049|gb|EFU91240.1| ribosomal protein S2 [Enterococcus faecalis TX0630] Length = 261 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 104/267 (38%), Positives = 160/267 (59%), Gaps = 7/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I +L+ + + Sbjct: 61 AEEGGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R++L++ L GI DM +PD+M++VD +E++A+QEA +L Sbjct: 121 EEDGIFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +D VIP NDD+ R++ L +A A I+G G D + Sbjct: 181 IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQ------GEDQATEE 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 V + E +EE E + + Sbjct: 235 LFVEETPEATSIEEIVDVVEGNNESAE 261 >gi|209573686|sp|A4VXV7|RS2_STRSY RecName: Full=30S ribosomal protein S2 Length = 258 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 163/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + Sbjct: 61 AANEAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--- 238 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGNQGEDSVAAVEAELAA 240 Query: 239 -----SAGETVVHSKEG 250 + E +V EG Sbjct: 241 EPASTESIEELVEVVEG 257 >gi|28868740|ref|NP_791359.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato str. DC3000] gi|213969118|ref|ZP_03397257.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato T1] gi|301383987|ref|ZP_07232405.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato Max13] gi|302061959|ref|ZP_07253500.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato K40] gi|302134054|ref|ZP_07260044.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38258313|sp|Q886P3|RS2_PSESM RecName: Full=30S ribosomal protein S2 gi|28851979|gb|AAO55054.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato str. DC3000] gi|213926116|gb|EEB59672.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato T1] gi|330872739|gb|EGH06888.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016367|gb|EGH96423.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 247 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 150/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE + Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|90413529|ref|ZP_01221520.1| 30S ribosomal protein S2 [Photobacterium profundum 3TCK] gi|90325461|gb|EAS41944.1| 30S ribosomal protein S2 [Photobacterium profundum 3TCK] Length = 242 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 114/242 (47%), Positives = 159/242 (65%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I+ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAEINKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G++LFV TK AS+ + E+A QY VN++WLGGM+TNWKTV QSI++L++LE Sbjct: 61 AARKGKVLFVGTKRAASESIKESAINCDQYYVNNRWLGGMLTNWKTVRQSIKRLKELEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI++MGGLPD MFV+D + E +AI+EA L Sbjct: 121 SADGTFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VVDTNSNPD VD+VIPGNDD+ RSI L+ VA + + Sbjct: 181 IPVFSVVDTNSNPDGVDFVIPGNDDAIRSIQLYTGAVAQTVTEARNQDIVVQAEQDGFVA 240 Query: 242 ET 243 E Sbjct: 241 EA 242 >gi|88596393|ref|ZP_01099630.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 84-25] gi|88191234|gb|EAQ95206.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 84-25] Length = 263 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 112/264 (42%), Positives = 165/264 (62%), Gaps = 9/264 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEAL 233 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 + ++ + EE + + ++ + Sbjct: 234 ANEEKEITDEEKKEVLDEAISEED 257 >gi|300933914|ref|ZP_07149170.1| 30S ribosomal protein S2 [Corynebacterium resistens DSM 45100] Length = 264 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 161/227 (70%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG IL+V TK QA + V A+R VN +WLGGM+TN++TV++ + +L++L+ + Sbjct: 61 VAHGGNILYVGTKKQAQEAVATEAERVGMPYVNHRWLGGMLTNFQTVAKRLHRLKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G TKKE L + R+R+KL+R L GI DM +P +++VDTN+E +A+ EA++L Sbjct: 121 DAAEDGYKGRTKKEVLMLTRERNKLERVLGGIADMTKVPSALWIVDTNKEHIAVSEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 RIP+VA++DTN +PD+VD+ IPGNDDS S AL +++SA DG Sbjct: 181 RIPVVAILDTNCDPDVVDFPIPGNDDSIGSAALLTRVISSAVEDGRK 227 >gi|46579287|ref|YP_010095.1| 30S ribosomal protein S2 [Desulfovibrio vulgaris str. Hildenborough] gi|120603151|ref|YP_967551.1| 30S ribosomal protein S2 [Desulfovibrio vulgaris DP4] gi|61215613|sp|Q72DQ5|RS2_DESVH RecName: Full=30S ribosomal protein S2 gi|166225267|sp|A1VFA8|RS2_DESVV RecName: Full=30S ribosomal protein S2 gi|46448701|gb|AAS95354.1| ribosomal protein S2 [Desulfovibrio vulgaris str. Hildenborough] gi|120563380|gb|ABM29124.1| SSU ribosomal protein S2P [Desulfovibrio vulgaris DP4] gi|311233115|gb|ADP85969.1| ribosomal protein S2 [Desulfovibrio vulgaris RCH1] Length = 254 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 112/247 (45%), Positives = 160/247 (64%), Gaps = 1/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV M + A + DT Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKMFRVAHDKVVDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR++F+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +SI +L+ LE + Sbjct: 61 VANGGRVMFIGTKRQAQEAVATEAGRAGQFYVTNRWMGGTLTNFFTIQKSIDRLKKLEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L ++R+ DKL L GI+DM LP L FV+D +RE +AI+E R+L Sbjct: 121 FADGTVNRYQKKEILRLQREMDKLLATLGGIKDMDKLPQLAFVIDPHREDIAIKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAV DTN +PDL+D+VIPGNDD+ R+I LF +A A ++G A + G D + Sbjct: 181 IPIVAVTDTNCDPDLIDFVIPGNDDAIRAIKLFVAAIADACLEGDALRKERKGQDAEEEL 240 Query: 242 ETVVHSK 248 + K Sbjct: 241 KKASEPK 247 >gi|229824120|ref|ZP_04450189.1| hypothetical protein GCWU000282_01424 [Catonella morbi ATCC 51271] gi|229786474|gb|EEP22588.1| hypothetical protein GCWU000282_01424 [Catonella morbi ATCC 51271] Length = 249 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 108/250 (43%), Positives = 167/250 (66%), Gaps = 5/250 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV ++ +A + + A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLVDEAYNYMREAAADGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LFV TK QA V E A RS QY +N +WLGG++TNW T+ I++L+ +E++ + Sbjct: 61 VVLFVGTKKQAQKAVEEHAVRSGQYYINHRWLGGLLTNWDTIQGRIRRLKAIEKMAEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + I +++++L++ L GI+DM +PD++F+VD +E++A+QEA++L IPIVA Sbjct: 121 FEVLPKKEVIEIRKEQERLEKFLGGIKDMPRIPDVIFIVDPRKERIAVQEAQKLNIPIVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQHSYMGADTKSAGET 243 +VDTN +PD +D VIP NDD+ R+I+L +A A I+ G+ + D K+ + Sbjct: 181 MVDTNCDPDEIDVVIPSNDDAIRAISLIAGAMADAVIESNQGVVEAVAEESTD-KAFFDN 239 Query: 244 VVHSKEGMQL 253 + S EG + Sbjct: 240 LFESNEGQEA 249 >gi|78777996|ref|YP_394311.1| 30S ribosomal protein S2 [Sulfurimonas denitrificans DSM 1251] gi|123768584|sp|Q30PK5|RS2_SULDN RecName: Full=30S ribosomal protein S2 gi|78498536|gb|ABB45076.1| SSU ribosomal protein S2P [Sulfurimonas denitrificans DSM 1251] Length = 259 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 107/257 (41%), Positives = 153/257 (59%), Gaps = 1/257 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + ++ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G +LFV TK QA V +AA V+++WLGGM+TN+ T+ +SI+KL + E+ N Sbjct: 62 GKTVLFVGTKKQARASVRDAAIACGMPYVDNRWLGGMLTNFPTIQKSIRKLDVISEMQEN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + R+++KL+ GIR+M LPD++FV+D +E +A+ EAR L IP+ Sbjct: 122 GQIDLLTKKEALMLSRQKEKLESYFGGIRNMKKLPDMLFVMDAVKEHIAVLEARCLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDL+ Y IPGNDD+ RSI LFC + A +G A + E V Sbjct: 182 VAPLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTEAINEGKALRSGGRDEIVAEDSEEV 241 Query: 245 VHSKEGMQLEEDSQSSE 261 ED ++ E Sbjct: 242 STVDADAITAEDFETEE 258 >gi|89075420|ref|ZP_01161837.1| 30S ribosomal protein S2 [Photobacterium sp. SKA34] gi|89048836|gb|EAR54406.1| 30S ribosomal protein S2 [Photobacterium sp. SKA34] Length = 242 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 114/242 (47%), Positives = 158/242 (65%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL I Sbjct: 1 MATVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNAALAEIEKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G++LFV TK AS+ + EAA QY VN++WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AARKGKVLFVGTKRAASESIKEAAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI++MGGLPD MFV+ + E +AI+EA L Sbjct: 121 STDGTFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIGADCEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VD+VIPGNDD+ R+I L+ VA + + + + Sbjct: 181 IPVFAVVDTNSDPDGVDFVIPGNDDAIRAIQLYTGAVAQTVKEARNQDIAVQAEEDGFVA 240 Query: 242 ET 243 E Sbjct: 241 EA 242 >gi|73667135|ref|YP_303151.1| 30S ribosomal protein S2 [Ehrlichia canis str. Jake] gi|123745847|sp|Q3YRV2|RS2_EHRCJ RecName: Full=30S ribosomal protein S2 gi|72394276|gb|AAZ68553.1| SSU ribosomal protein S2P [Ehrlichia canis str. Jake] Length = 291 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 119/249 (47%), Positives = 173/249 (69%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP+FT+R L+ESGV FGH+ WNPKM YI+ N+ HII+L TV +L+ AL+ + D Sbjct: 4 LPKFTMRDLVESGVHFGHKASRWNPKMAPYIYGVYNDIHIINLQNTVVLLKNALKALYDV 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + GR+LF+ TK QAS + + A R QY VN++WLGGM+TNW+T+S SI+KL++ E+L Sbjct: 64 VLKRGRVLFIGTKVQASAIIADEAIRCGQYYVNNRWLGGMLTNWETISLSIKKLKEYEKL 123 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + FTKKE L E+KR KL R++ GI +MGGLP ++FV+DTN+E +AI+EA +L I Sbjct: 124 IENVDNQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHVLFVIDTNKEHIAIKEANKLNI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++AV+DTNS+P +DY IPGNDD+ RSI FC +V+ ++ I + G + + Sbjct: 184 PVIAVLDTNSDPTGIDYPIPGNDDAVRSIDFFCKIVSDTILEAIRSDLAKSGINVDGIKD 243 Query: 243 TVVHSKEGM 251 V ++ + Sbjct: 244 FSVEKRDDL 252 >gi|218133698|ref|ZP_03462502.1| hypothetical protein BACPEC_01567 [Bacteroides pectinophilus ATCC 43243] gi|217991073|gb|EEC57079.1| hypothetical protein BACPEC_01567 [Bacteroides pectinophilus ATCC 43243] Length = 239 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 104/241 (43%), Positives = 154/241 (63%), Gaps = 3/241 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM++YI+ RN HIIDL ++V + +A + +SD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMQQYIYTHRNGIHIIDLQKSVGKVDEAYKAVSDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA D + A+R + VN +WLGGM+TN+ T+ + I KL ++E + + Sbjct: 61 TILFVGTKKQAQDAIATEAQRCGMFYVNERWLGGMLTNFTTIQKRIAKLHEIETMKEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE +E++ +KL++ L GI++M LPD +FVVD +E++ IQEA L IP++ Sbjct: 121 FDVLPKKEVALLEKELEKLQKNLGGIKEMKKLPDAIFVVDPKKERICIQEAHALGIPLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTN +PD +DYVIPGNDD+ R++ L +A A I+ A Q + + A E Sbjct: 181 IVDTNCDPDELDYVIPGNDDAIRAVKLIVSKMADAVIE--ANQGAEEAPVAEDAAEETTE 238 Query: 247 S 247 + Sbjct: 239 A 239 >gi|304414215|ref|ZP_07395583.1| 30S ribosomal subunit protein S2 [Candidatus Regiella insecticola LSR1] gi|304283429|gb|EFL91825.1| 30S ribosomal subunit protein S2 [Candidatus Regiella insecticola LSR1] Length = 306 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 110/236 (46%), Positives = 159/236 (67%), Gaps = 1/236 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + ++R++LE+GV +GH+ WNPKM YIF RN HII+L +TVPML +AL + Sbjct: 63 LIMAIVSMRKMLEAGVHYGHQTRYWNPKMGPYIFGTRNKVHIINLEKTVPMLNEALAELK 122 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 R G+ILFV TK AS+ + + A+ QY VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 123 KISTRKGKILFVGTKRAASESIKKTAEDCKQYFVNHRWLGGMLTNWKTVRQSIKRLKELE 182 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TKKE L R+ L+ +L GI+DMGGLPD +FV+D N E +AI+EA Sbjct: 183 SQSQDGTFEKLTKKEVLMRTRELSNLENSLGGIKDMGGLPDALFVIDANHEHIAIKEANN 242 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 L IPI ++VDTNS+P +D++IPGNDD+ R+I L+ + VA+A +G ++ + Sbjct: 243 LGIPIFSIVDTNSSPTGIDFIIPGNDDAIRAINLYLEAVATAIHEGHSQDLAVQAE 298 >gi|254414470|ref|ZP_05028236.1| ribosomal protein S2 [Microcoleus chthonoplastes PCC 7420] gi|196178700|gb|EDX73698.1| ribosomal protein S2 [Microcoleus chthonoplastes PCC 7420] Length = 309 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 96/255 (37%), Positives = 151/255 (59%), Gaps = 4/255 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ Q++E+GV FGH+ WNP+M++YI+ RN HIIDL QT ++++A + Sbjct: 1 MPVVSLAQMMEAGVHFGHQTRRWNPRMDQYIYTARNGVHIIDLVQTAQLMEEAYSYMRTA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA+ + + A R Y VN +WLGGM+TNW+T+ +++L++LE Sbjct: 61 TEQGKRCLFVGTKRQAAGIIAQEASRCGAYYVNQRWLGGMLTNWETIKGRVERLKELERR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ KL++ L GI+ M +PD++ ++D RE AI+E +L Sbjct: 121 EESGALDLLPKKEAAVLRRELGKLQKYLGGIKMMRRIPDIVVIIDQRREYNAIKECEKLS 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V+++DTN +PD+VD IP NDD+ RSI L +A A +G +H + + + Sbjct: 181 IPVVSMLDTNCDPDVVDIPIPANDDAIRSIKLIIGKLADAIYEG---RHGELETEDEQEF 237 Query: 242 ETVVHSKEGMQLEED 256 + E EED Sbjct: 238 AQALDEMEDEYSEED 252 >gi|312796244|ref|YP_004029166.1| SSU ribosomal protein S2P [Burkholderia rhizoxinica HKI 454] gi|312168019|emb|CBW75022.1| SSU ribosomal protein S2P [Burkholderia rhizoxinica HKI 454] Length = 274 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 111/246 (45%), Positives = 167/246 (67%), Gaps = 1/246 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 29 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAAN 88 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G ILFV TK Q+ D + E A R+ VN++WLGGM+TN+KT+ SI+KL+D+E + + Sbjct: 89 RGTILFVGTKRQSRDTIAEEAARAGMPYVNNRWLGGMLTNFKTLKTSIKKLKDMEAAIES 148 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FV+D K+A+ EA++L +P+ Sbjct: 149 GEVEKMSKKEALMFEREMAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEAKKLGVPV 208 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +PD VDYVIPGNDD+S+++ L+ VA A ++G A + + T+ E V Sbjct: 209 IAVVDTNHSPDGVDYVIPGNDDASKAVVLYAQGVADAILEGRANALNDVVQSTRGDDEFV 268 Query: 245 VHSKEG 250 +++ Sbjct: 269 EVNEQA 274 >gi|330964141|gb|EGH64401.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 247 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 150/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE + Sbjct: 61 ASGKKKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|322436645|ref|YP_004218857.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX9] gi|321164372|gb|ADW70077.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX9] Length = 313 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 117/284 (41%), Positives = 178/284 (62%), Gaps = 10/284 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M ++A + ++D Sbjct: 1 MANITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVTDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA D V E A R+ +NS+WLGG++TNW TV +S+++L++L+++ Sbjct: 61 TSTGKLILFVGTKRQAQDAVAEEATRAGMPYINSRWLGGLLTNWVTVQKSVKRLQELDDM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + +ER+R L L GI+ M LPD +FV+D+N E +A+ EAR+L Sbjct: 121 STDGRYELLTKKEVIKLERERKHLATNLSGIKAMKRLPDALFVIDSNNEAIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-A 240 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A +A +G+ A + Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTMKMADSAAEGVQMVSERAFATESADV 240 Query: 241 GETVVHS--------KEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 E S + ++E + ++E+SV D + + E Sbjct: 241 RELPTESHFIGEEGEEIEAPVQESTGTAEASVEDAESEVIDLEA 284 >gi|294140003|ref|YP_003555981.1| 30S ribosomal protein S2 [Shewanella violacea DSS12] gi|293326472|dbj|BAJ01203.1| ribosomal protein S2 [Shewanella violacea DSS12] Length = 242 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + E+A QY V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ KL ++L GI++MGGLPD++F++ + E +A++EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELAKLDKSLGGIKNMGGLPDVLFIIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTNS+PD ++Y+IPGNDD+ RSI L+ + VA+AA G + + Sbjct: 181 IPVVAIVDTNSSPDGINYIIPGNDDAMRSIRLYTESVAAAAKSGRGQDLAVQAEQDGFVE 240 >gi|298346463|ref|YP_003719150.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 43063] gi|304389798|ref|ZP_07371757.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657105|ref|ZP_07909989.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236524|gb|ADI67656.1| 30S ribosomal protein S2 [Mobiluncus curtisii ATCC 43063] gi|304326974|gb|EFL94213.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492208|gb|EFU81815.1| 30S ribosomal protein S2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 281 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 108/251 (43%), Positives = 161/251 (64%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I +R+ +I+DL QT+ + A + + +T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTDRSGIYILDLQQTIADIDIAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + + E A R VN +WLGGM+TN+ TV + +Q+L++LE+ Sbjct: 61 VAHGGTLLFVGTKKQAQESIQEQATRVGMPFVNERWLGGMLTNFSTVHKRLQRLKELEQY 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL + L GIRDM P ++VVDT +E LAI EA++L Sbjct: 121 DFEDTSASGLTKKELLMMRREKDKLAKTLGGIRDMAKTPSAIWVVDTKKEHLAIAEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ R++ L ++A A +G+ + + + Sbjct: 181 GIPVVAILDTNCDPDEVDYGIPGNDDAIRAVDLLTKVIADACAEGLLARSKKQLGENPES 240 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 241 AEPMAEWEREL 251 >gi|210622734|ref|ZP_03293326.1| hypothetical protein CLOHIR_01274 [Clostridium hiranonis DSM 13275] gi|210154066|gb|EEA85072.1| hypothetical protein CLOHIR_01274 [Clostridium hiranonis DSM 13275] Length = 239 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 148/221 (66%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV +++A + + + G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMGKYIFTERNGIYIIDLQKTVKKVEEAYKFVKEVAETGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA + + E A+R + VN +WLGGM+TN+KT+ I KLR+LE + + Sbjct: 61 PILFVGTKKQAQEAIKEEAERCGMFYVNERWLGGMLTNYKTIKTRINKLRELERMEEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + + +++KL++ L GI++M LP MFVVD +E +AIQEA RL IP+V Sbjct: 121 FDVLPKKEVIKLRAEKEKLEKNLGGIKEMPELPGAMFVVDPRKENIAIQEAHRLGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDTN +P+ +D+ IPGNDD+ R++ L +A+A I+G Sbjct: 181 IVDTNCDPEELDFPIPGNDDAIRAVKLITGAMATAVIEGRQ 221 >gi|57238054|ref|YP_179303.1| 30S ribosomal protein S2 [Campylobacter jejuni RM1221] gi|86150711|ref|ZP_01068927.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 260.94] gi|121613320|ref|YP_001000857.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81-176] gi|148926187|ref|ZP_01809872.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8486] gi|157415446|ref|YP_001482702.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81116] gi|167005769|ref|ZP_02271527.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81-176] gi|205356206|ref|ZP_03222972.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8421] gi|315124648|ref|YP_004066652.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|81675565|sp|Q5HTT2|RS2_CAMJR RecName: Full=30S ribosomal protein S2 gi|166225257|sp|A1W0G6|RS2_CAMJJ RecName: Full=30S ribosomal protein S2 gi|172047157|sp|A8FMN8|RS2_CAMJ8 RecName: Full=30S ribosomal protein S2 gi|57166858|gb|AAW35637.1| ribosomal protein S2 [Campylobacter jejuni RM1221] gi|85841881|gb|EAQ59127.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 260.94] gi|87249309|gb|EAQ72270.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81-176] gi|145845358|gb|EDK22451.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8486] gi|157386410|gb|ABV52725.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81116] gi|205345811|gb|EDZ32448.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CG8421] gi|284926406|gb|ADC28758.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni IA3902] gi|307748088|gb|ADN91358.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni M1] gi|315018370|gb|ADT66463.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058614|gb|ADT72943.1| SSU ribosomal protein S2p (SAe) [Campylobacter jejuni subsp. jejuni S3] Length = 263 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 112/264 (42%), Positives = 165/264 (62%), Gaps = 9/264 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEAL 233 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 + ++ + EE + + ++ + Sbjct: 234 ANEEKEITDEEKKEVLDEAMSEED 257 >gi|293189845|ref|ZP_06608559.1| ribosomal protein S2 [Actinomyces odontolyticus F0309] gi|292821260|gb|EFF80205.1| ribosomal protein S2 [Actinomyces odontolyticus F0309] Length = 276 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 113/229 (49%), Positives = 158/229 (68%), Gaps = 2/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + V E A+R VN +WLGGM+TN+ TV+ +Q+L++LE+ Sbjct: 61 VAHGGTLLFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVATRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+L Sbjct: 121 DFDDVASSGHTKKELLMMRREKDKLSRTLGGIRDMTKVPSAVWIVDPKKEHLAVSEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 RIPIVA++DTN++PD VDY IPGNDD+ R++AL ++A A +G+ + Sbjct: 181 RIPIVAILDTNADPDEVDYRIPGNDDAIRAVALLTRVIADAVAEGLIAR 229 >gi|260772222|ref|ZP_05881138.1| SSU ribosomal protein S2p (SAe) [Vibrio metschnikovii CIP 69.14] gi|260611361|gb|EEX36564.1| SSU ribosomal protein S2p (SAe) [Vibrio metschnikovii CIP 69.14] Length = 242 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELVKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 GDKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+++L GI+DMGGLPD +FV+D + E +A++EA L Sbjct: 121 ATDGTFDKLTKKEALMRTREMDKLEKSLGGIKDMGGLPDALFVIDADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD +DY+IPGNDD+ R++ L+ + A + +G + + + Sbjct: 181 IPVFAVVDTNSNPDGIDYIIPGNDDAIRAVQLYLNAAAESVNEGRNKDVAAVAEKDGFVE 240 >gi|33592517|ref|NP_880161.1| 30S ribosomal protein S2 [Bordetella pertussis Tohama I] gi|33596174|ref|NP_883817.1| 30S ribosomal protein S2 [Bordetella parapertussis 12822] gi|33601582|ref|NP_889142.1| 30S ribosomal protein S2 [Bordetella bronchiseptica RB50] gi|61215727|sp|Q7VYD0|RS2_BORPE RecName: Full=30S ribosomal protein S2 gi|61215733|sp|Q7WA60|RS2_BORPA RecName: Full=30S ribosomal protein S2 gi|61215734|sp|Q7WJ94|RS2_BORBR RecName: Full=30S ribosomal protein S2 gi|33572163|emb|CAE41709.1| 30S ribosomal protein S2 [Bordetella pertussis Tohama I] gi|33573177|emb|CAE36829.1| 30S ribosomal protein S2 [Bordetella parapertussis] gi|33576018|emb|CAE33098.1| 30S ribosomal protein S2 [Bordetella bronchiseptica RB50] gi|332381935|gb|AEE66782.1| 30S ribosomal protein S2 [Bordetella pertussis CS] Length = 249 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 112/246 (45%), Positives = 162/246 (65%), Gaps = 1/246 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L QTV Q+A + + VARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK A + V A R V+++WLGGM+TN+KTV SI++L+D+E ++ + Sbjct: 64 NILFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L +R+ DKL +++ GI+DM GLPD +FV+D K+A+ EA+ L IP+VA Sbjct: 124 FERMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +PD +D+VIPGNDDS+R+IAL+ +A A ++G + + + + E V Sbjct: 184 VVDTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGREQNINGLVEEIGEGQEEFVE 243 Query: 247 SKEGMQ 252 ++ Sbjct: 244 VQDNQA 249 >gi|223933542|ref|ZP_03625524.1| ribosomal protein S2 [Streptococcus suis 89/1591] gi|37498573|gb|AAO42672.1| 30S ribosomal protein S2 [Streptococcus suis] gi|223897802|gb|EEF64181.1| ribosomal protein S2 [Streptococcus suis 89/1591] Length = 258 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 161/257 (62%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + I D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFIRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L+++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLTNWGTIQKRIARLKEINRM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI DM +PD+MFVVD ++E++A++EA++L Sbjct: 121 EEDGTLDVLPKKEVALLNKQRARLEKFLGGIADMPRIPDVMFVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--- 238 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAIIEGNQGEDSVAAVEAELAA 240 Query: 239 -----SAGETVVHSKEG 250 + E +V EG Sbjct: 241 EPASTESIEELVEVVEG 257 >gi|299135610|ref|ZP_07028794.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX8] gi|298601734|gb|EFI57888.1| ribosomal protein S2 [Acidobacterium sp. MP5ACTX8] Length = 311 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 177/277 (63%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M + A + ++D Sbjct: 1 MASITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKDASKFVTDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D V E A R+ +NS+WLGG++TNW TV +S+++L++L+++ Sbjct: 61 TATGKLVLFVGTKRQAQDAVAEEATRAGMPYINSRWLGGLLTNWVTVQKSVKRLQELDDM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + +ER+R L L GI+ M LPD +FV+D+N E +A+ EAR+L Sbjct: 121 STDGRYELLTKKEVIKLERERKSLSTNLSGIKSMKRLPDAIFVIDSNNEAIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A +A +G + + Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTTKIADSAYEGTQMISEKALSQEYADI 240 Query: 242 ETVV-------HSKEGM--QLEEDSQSSESSVLDGQE 269 + + E + +++E + S+E+SV D ++ Sbjct: 241 QPIATESHFIGEDGEEIFGEIQESAGSAEASVEDVED 277 >gi|319943826|ref|ZP_08018107.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599] gi|319743059|gb|EFV95465.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599] Length = 250 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 112/252 (44%), Positives = 160/252 (63%), Gaps = 4/252 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 TIRQ+LE+GV FGH+ WNP+M YIF RN HII+L +T+ Q+A + + A Sbjct: 2 SVTIRQMLEAGVHFGHQTRFWNPRMAPYIFGHRNKIHIINLEKTLVKYQEATRYLRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-LL 123 GG ILFV TK Q+ + + E A R+ V+ +WLGGM+TN+KTV SI++L+D+E+ + Sbjct: 62 NGGTILFVGTKRQSREIIAEEAARAGMPYVDERWLGGMLTNFKTVKGSIKRLKDMEQAVE 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKE L R+ KL +L GI+D+ GLPD +F+VD K+A+ EAR+L +P Sbjct: 122 DGALDQMTKKEALLFTRELAKLTSSLGGIKDLNGLPDALFIVDVGYHKIAVTEARKLGVP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 IV VVDTN +P+ +DYVIPGNDDS R++ L+ VA A ++G A + + K+A E Sbjct: 182 IVGVVDTNHSPEGIDYVIPGNDDSGRAVRLYARGVADAILEGKAAR---LQETVKAATEE 238 Query: 244 VVHSKEGMQLEE 255 + G + E Sbjct: 239 DEFVEVGTEEEA 250 >gi|57168060|ref|ZP_00367199.1| ribosomal protein S2 [Campylobacter coli RM2228] gi|57020434|gb|EAL57103.1| ribosomal protein S2 [Campylobacter coli RM2228] Length = 263 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 112/264 (42%), Positives = 165/264 (62%), Gaps = 3/264 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + + E Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQD--GEALPSEEKE 239 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 + +E ++ +++ S E + + Sbjct: 240 ITDEEKKEVLDEAMSEEDFNGEQE 263 >gi|55820175|ref|YP_138617.1| 30S ribosomal protein S2 [Streptococcus thermophilus LMG 18311] gi|55822063|ref|YP_140504.1| 30S ribosomal protein S2 [Streptococcus thermophilus CNRZ1066] gi|81676632|sp|Q5M1X5|RS2_STRT1 RecName: Full=30S ribosomal protein S2 gi|81676783|sp|Q5M6G5|RS2_STRT2 RecName: Full=30S ribosomal protein S2 gi|55736160|gb|AAV59802.1| 30S ribosomal protein S2 [Streptococcus thermophilus LMG 18311] gi|55738048|gb|AAV61689.1| 30S ribosomal protein S2 [Streptococcus thermophilus CNRZ1066] gi|312277497|gb|ADQ62154.1| 30S ribosomal protein S2 [Streptococcus thermophilus ND03] Length = 255 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 166/253 (65%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M+ A + + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMVDTAYEFVREA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V E A R+ QY +N +WLGG +TNW T+ + I +L++++++ Sbjct: 61 AANDAVILFVGTKKQAAEAVAEEATRAGQYYINHRWLGGTLTNWNTIKKRIARLKEIKQM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L Sbjct: 121 EADGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVIYIVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNADPDEIDVIIPANDDAIRAVKLITSKMADAIIEGNQGEDASADFQEAAAA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|161760550|ref|NP_906455.2| 30S ribosomal protein S2 [Wolinella succinogenes DSM 1740] Length = 273 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 116/267 (43%), Positives = 168/267 (62%), Gaps = 7/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE GV FGH+ WNPKM++YIF R N HIIDL +T+ + V+ D Sbjct: 1 MIMVTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIHIIDLQKTLRYFRYTYNVVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ++FV TK QAS+ + + A VN +WLGGM+TN+ T+ +SI+KL +EE+ Sbjct: 61 AAEGKTVMFVGTKKQASETIKQYADTINAPYVNYRWLGGMLTNFSTIKKSIRKLEVIEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + TKKE+L + RK++KL++ L G+R M PD++FVVD +EK+A+ EARRL Sbjct: 121 EASGQIELLTKKEKLMLTRKKEKLEKYLGGVRHMKKAPDMLFVVDAAKEKIAVAEARRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA +DTN +PD+VD+ IPGNDD+ RSI LFC +A A +G A G++ A Sbjct: 181 IPVVAPLDTNCDPDVVDFPIPGNDDAIRSIQLFCKEMAEAIQEGRA----LAGSEEGEAT 236 Query: 242 ETVVHSKEGMQLE--EDSQSSESSVLD 266 E V + E + E ++ S E L Sbjct: 237 EEVTPASEAEKQEVLAEAMSEEGDALQ 263 >gi|66044591|ref|YP_234432.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae B728a] gi|289675257|ref|ZP_06496147.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae FF5] gi|302187898|ref|ZP_07264571.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae 642] gi|81308450|sp|Q4ZWS8|RS2_PSEU2 RecName: Full=30S ribosomal protein S2 gi|63255298|gb|AAY36394.1| Ribosomal protein S2, bacterial and organelle form [Pseudomonas syringae pv. syringae B728a] gi|330896058|gb|EGH28279.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936826|gb|EGH40977.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. pisi str. 1704B] gi|330950681|gb|EGH50941.1| 30S ribosomal protein S2 [Pseudomonas syringae Cit 7] gi|330968961|gb|EGH69027.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330975401|gb|EGH75467.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 247 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 149/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++G FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGCHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE + Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|217970580|ref|YP_002355814.1| 30S ribosomal protein S2 [Thauera sp. MZ1T] gi|217507907|gb|ACK54918.1| ribosomal protein S2 [Thauera sp. MZ1T] Length = 251 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 108/252 (42%), Positives = 170/252 (67%), Gaps = 4/252 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNP+M YIF +RN HI++L +T+ +A++ + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMAKYNEAMEFVRKLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G I+FV+TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L+++E ++ Sbjct: 62 NRGNIMFVSTKRQAREIIAEEAQRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMME 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +K+E L + R+ +KL++++ GI+DMGGLPD +FV+D K+AI EA++L IP Sbjct: 122 DGSIERLSKREALTVRRELEKLQKSIGGIKDMGGLPDALFVIDVGYHKIAITEAQKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VAVVDTN +P+ VDY+IPGNDDSSR+I L+ VA A + G ++ + + G+ Sbjct: 182 VVAVVDTNHSPEGVDYLIPGNDDSSRAIRLYARGVADAVLQGRSQVLQEI---VDAGGDE 238 Query: 244 VVHSKEGMQLEE 255 V +E E+ Sbjct: 239 FVEVEEEGSQEQ 250 >gi|157962704|ref|YP_001502738.1| 30S ribosomal protein S2 [Shewanella pealeana ATCC 700345] gi|189044995|sp|A8H6L6|RS2_SHEPA RecName: Full=30S ribosomal protein S2 gi|157847704|gb|ABV88203.1| ribosomal protein S2 [Shewanella pealeana ATCC 700345] Length = 242 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + EAA QY V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ DKL+++L GI++M GLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS+PD ++Y+IPGNDD+ RSI L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSSPDGINYIIPGNDDAMRSIRLYTQSVAAAAKAGRGQDLAVQAEQDGFVE 240 >gi|257055041|ref|YP_003132873.1| 30S ribosomal protein S2P [Saccharomonospora viridis DSM 43017] gi|256584913|gb|ACU96046.1| SSU ribosomal protein S2P [Saccharomonospora viridis DSM 43017] Length = 278 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 115/271 (42%), Positives = 165/271 (60%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLL+SGV FGH+ WNPKM+RYI ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMKQLLDSGVHFGHQTRRWNPKMKRYILTERNGIYIIDLQQTLSYIDRAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + A R VN +WLGGM+TN++TV + +Q+L++LE Sbjct: 61 VAHGGTILFVGTKKQAQEAIATEAGRVGMPYVNQRWLGGMLTNFQTVHKRLQRLKELEAQ 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 QG TK+E L + R++DKL+R L GIRDM +P +++VDT +E +A+ EAR+L Sbjct: 121 EQTGGFQGLTKREILTLTREKDKLERTLGGIRDMSKVPSAVWIVDTKKEHIAVNEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA++DTN +PD VDY IPGNDD+ RS AL + + A ++A Sbjct: 181 IPIVAILDTNCDPDEVDYPIPGNDDAIRSAAL----LTKVVAEAAAAGLMARAGRNRAAA 236 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 E + G ++ E +L G + Sbjct: 237 EGEDKPEAGAASDQPLPEWEQELLAGSDATA 267 >gi|223038847|ref|ZP_03609139.1| ribosomal protein S2 [Campylobacter rectus RM3267] gi|222879820|gb|EEF14909.1| ribosomal protein S2 [Campylobacter rectus RM3267] Length = 266 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 116/265 (43%), Positives = 167/265 (63%), Gaps = 8/265 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + V+ D A Sbjct: 2 VTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNVVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + Sbjct: 62 GKTILFVGTKKQAGATLKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEAMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL +L GIR++ +PD++FV+DT +EK+A+ EA RL+IP+ Sbjct: 122 GSINLLTKKEALMLRRKKEKLLASLGGIRNLKTVPDMIFVIDTVKEKIAVAEANRLKIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VD+ IPGNDD+ RS+ LFC +A A I+G ++ K GE Sbjct: 182 VAPIDTNCDPDVVDFPIPGNDDAIRSVQLFCQEMAEAIIEGRSQL-------EKDGGELE 234 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 + Q E+D+ +E++ D E Sbjct: 235 EGKEAVSQAEKDAVVNEAASEDFSE 259 >gi|312143679|ref|YP_003995125.1| ribosomal protein S2 [Halanaerobium sp. 'sapolanicus'] gi|311904330|gb|ADQ14771.1| ribosomal protein S2 [Halanaerobium sp. 'sapolanicus'] Length = 252 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 102/228 (44%), Positives = 150/228 (65%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLESGV FGH+ WNPKME YIF ERN +IIDL QTV ++ KA + + Sbjct: 1 MSVVNMKQLLESGVHFGHQTKRWNPKMEPYIFTERNGIYIIDLQQTVKLIDKAYNFVKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 A G ++LFV TK QA + V + A+R VN +WLGGM+TN+ T+ + I +L E Sbjct: 61 AAEGKKVLFVGTKRQAQETVKKEAERCGMPYVNQRWLGGMLTNYHTIKKRIDRLDELEEM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ DKL+R L GIR+M GLPD++F+ D +E +A++EA +L Sbjct: 121 EEEGIFEVLPKKEVIELNKEHDKLERFLGGIRNMNGLPDVIFITDAKKEDIAVKEAIKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPIV+++DTN +PDL+DYVIPGNDD+ R++ L +++ A + G + Sbjct: 181 IPIVSILDTNCDPDLIDYVIPGNDDAIRAVKLITSVISDAVLAGKQGR 228 >gi|332296170|ref|YP_004438093.1| ribosomal protein S2 [Thermodesulfobium narugense DSM 14796] gi|332179273|gb|AEE14962.1| ribosomal protein S2 [Thermodesulfobium narugense DSM 14796] Length = 247 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 95/246 (38%), Positives = 151/246 (61%), Gaps = 1/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF RN +IIDL +T+ + A Sbjct: 1 MSIISMKQLLEAGVHFGHQTRRWNPKMKPYIFTARNGIYIIDLQKTLRCFEVAYDFARKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA D + E A R VN++WLGG +TN+ T++ I +L++LEEL Sbjct: 61 ASEGEEILFVGTKRQAQDAIKEEAIRCGSPYVNTRWLGGTLTNFVTITSRIARLKELEEL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KE + ++++ KL+ +L G+++M LP +FV D ++++A+ EAR+L Sbjct: 121 QSSGRIDLYPIKEAMKLKKELAKLQSSLGGMKNMNRLPGALFVADIKKDQIAVLEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTN +PDLVD +IP NDD+ R+I L +A A I+ Q + +++K Sbjct: 181 IPVIGIVDTNCDPDLVDCIIPANDDAIRAIKLIAGKIADAIIEAKQGQDAIEISESKEFQ 240 Query: 242 ETVVHS 247 E+ + Sbjct: 241 ESTEEA 246 >gi|167624895|ref|YP_001675189.1| 30S ribosomal protein S2 [Shewanella halifaxensis HAW-EB4] gi|189044996|sp|B0TP83|RS2_SHEHH RecName: Full=30S ribosomal protein S2 gi|167354917|gb|ABZ77530.1| ribosomal protein S2 [Shewanella halifaxensis HAW-EB4] Length = 242 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R++L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMREMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ DKL+++L GI++M GLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS+PD ++Y+IPGNDD+ RSI L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSSPDGINYIIPGNDDAMRSIRLYTGSVAAAAKAGRGQDLAVQAEQDGFVE 240 >gi|22537971|ref|NP_688822.1| 30S ribosomal protein S2 [Streptococcus agalactiae 2603V/R] gi|25011912|ref|NP_736307.1| 30S ribosomal protein S2 [Streptococcus agalactiae NEM316] gi|76797881|ref|ZP_00780144.1| ribosomal protein S2 [Streptococcus agalactiae 18RS21] gi|77408437|ref|ZP_00785176.1| ribosomal protein S2 [Streptococcus agalactiae COH1] gi|77414272|ref|ZP_00790432.1| ribosomal protein S2 [Streptococcus agalactiae 515] gi|61215770|sp|Q8DXL8|RS2_STRA5 RecName: Full=30S ribosomal protein S2 gi|61215772|sp|Q8E388|RS2_STRA3 RecName: Full=30S ribosomal protein S2 gi|22534872|gb|AAN00695.1|AE014275_3 ribosomal protein S2 [Streptococcus agalactiae 2603V/R] gi|24413454|emb|CAD47532.1| ribosomal protein S2 [Streptococcus agalactiae NEM316] gi|76586784|gb|EAO63279.1| ribosomal protein S2 [Streptococcus agalactiae 18RS21] gi|77159688|gb|EAO70839.1| ribosomal protein S2 [Streptococcus agalactiae 515] gi|77172960|gb|EAO76090.1| ribosomal protein S2 [Streptococcus agalactiae COH1] Length = 256 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 100/251 (39%), Positives = 165/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V E AKR+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVAEEAKRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFELLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + ++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADVDFAQEAQA 240 Query: 242 ETVVHSKEGMQ 252 +++ E ++ Sbjct: 241 DSIEEIVEVVE 251 >gi|317056326|ref|YP_004104793.1| 30S ribosomal protein S2 [Ruminococcus albus 7] gi|315448595|gb|ADU22159.1| ribosomal protein S2 [Ruminococcus albus 7] Length = 245 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 104/228 (45%), Positives = 153/228 (67%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A I + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLEEAYMFIREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D + E A R+ + VN++WLGGMMTN+KT+ Q I++L L + Sbjct: 61 SANGQEVLFVGTKKQAGDSIKEEALRANAHYVNARWLGGMMTNFKTIEQRIKRLEQLHAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE ++ + +KL++ + GI++M LP +FVVD +EK+A+ EA++L Sbjct: 121 EEDGTFELLPKKEVTKLKLEIEKLEKFMGGIKNMKKLPGALFVVDPRKEKIAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G + Sbjct: 181 IPVVAIVDTNCDPDDVDYVIPGNDDAIRAVKLIAGCMANAIIEGRQGE 228 >gi|256545170|ref|ZP_05472536.1| 30S ribosomal protein S2 [Anaerococcus vaginalis ATCC 51170] gi|256399211|gb|EEU12822.1| 30S ribosomal protein S2 [Anaerococcus vaginalis ATCC 51170] Length = 256 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 103/219 (47%), Positives = 153/219 (69%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH+ WNPKM+++IF ERN +IIDL++T ++KA + I D + GG Sbjct: 1 MKKLLEAGVHFGHQTRRWNPKMKKFIFTERNGIYIIDLAKTANQIEKAYETIRDIASEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LFV TK QA D + + AKR QY V+++WLGGM+TN+ T+ S+ KL+ E + + Sbjct: 61 TVLFVGTKKQAQDSIEQEAKRCGQYYVSNRWLGGMLTNFNTIRNSVNKLKKYETMEEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE L ++ DKL++ L GI+DM LPD++FVVD + E++A+ EAR L IP+++ Sbjct: 121 FDLLPKKEVLQYNKEMDKLEKNLGGIKDMEDLPDVLFVVDPSNEQIAVHEARILGIPVIS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN +PD+VD IPGNDD+ R++ L L+A A I+G Sbjct: 181 IVDTNCDPDVVDIAIPGNDDAIRAVKLITSLMADAVIEG 219 >gi|154509158|ref|ZP_02044800.1| hypothetical protein ACTODO_01679 [Actinomyces odontolyticus ATCC 17982] gi|153798792|gb|EDN81212.1| hypothetical protein ACTODO_01679 [Actinomyces odontolyticus ATCC 17982] Length = 275 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 113/229 (49%), Positives = 158/229 (68%), Gaps = 2/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN +IIDL QT+ + A + T Sbjct: 1 MAVVTMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQTIADIDIAFDFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + V E A+R VN +WLGGM+TN+ TV+ +Q+L++LE+ Sbjct: 61 VAHGGTLLFVGTKKQAQEAVAEQAQRVGMPYVNHRWLGGMLTNFSTVATRLQRLKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R++DKL R L GIRDM +P +++VD +E LA+ EAR+L Sbjct: 121 DFDDVASSGHTKKELLMMRREKDKLSRTLGGIRDMTKVPSAVWIVDPKKEHLAVSEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 RIPIVA++DTN++PD VDY IPGNDD+ R++AL ++A A +G+ + Sbjct: 181 RIPIVAILDTNADPDEVDYRIPGNDDAIRAVALLTRVIADAVAEGLIAR 229 >gi|307705884|ref|ZP_07642722.1| ribosomal protein S2 [Streptococcus mitis SK597] gi|307620545|gb|EFN99643.1| ribosomal protein S2 [Streptococcus mitis SK597] Length = 258 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 102/258 (39%), Positives = 166/258 (64%), Gaps = 1/258 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + A+ ++ Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAVEAEFAASE 240 Query: 242 ETVVHSKEGMQLEEDSQS 259 +E +++ E + Sbjct: 241 TQADSIEEIVEVVEGDNA 258 >gi|76787145|ref|YP_330449.1| 30S ribosomal protein S2 [Streptococcus agalactiae A909] gi|77405661|ref|ZP_00782749.1| ribosomal protein S2 [Streptococcus agalactiae H36B] gi|77411541|ref|ZP_00787884.1| ribosomal protein S2 [Streptococcus agalactiae CJB111] gi|123601221|sp|Q3JZ54|RS2_STRA1 RecName: Full=30S ribosomal protein S2 gi|76562202|gb|ABA44786.1| ribosomal protein S2 [Streptococcus agalactiae A909] gi|77162395|gb|EAO73363.1| ribosomal protein S2 [Streptococcus agalactiae CJB111] gi|77175734|gb|EAO78515.1| ribosomal protein S2 [Streptococcus agalactiae H36B] Length = 256 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 100/251 (39%), Positives = 165/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V E AKR+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVAEEAKRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFELLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + ++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADVDFAQEAQA 240 Query: 242 ETVVHSKEGMQ 252 +++ E ++ Sbjct: 241 DSIEEIVEVVE 251 >gi|149195090|ref|ZP_01872182.1| 30S ribosomal protein S2 [Caminibacter mediatlanticus TB-2] gi|149134803|gb|EDM23287.1| 30S ribosomal protein S2 [Caminibacter mediatlanticus TB-2] Length = 274 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 168/257 (65%), Gaps = 9/257 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ L+ A V+ D A G Sbjct: 1 MKDLLECGVHFGHQKRRWNPKMKKYIFGVRKNIYIIDLQKTLRHLKYACNVVRDAAAEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 ILFV TK QA D + E A+R VN +WLGGM+TN+KT+ +SI+KL +E++ + Sbjct: 61 TILFVGTKKQAVDAIKEHAERCGMPYVNHRWLGGMLTNFKTIQKSIRKLEIIEKMQESGQ 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKERL +ER+R KL+R L GIR+M +PD++F++DT +EK+A+QEA +L +PIVA Sbjct: 121 VNLLTKKERLILERRRAKLERVLGGIRNMKKIPDMLFIIDTVKEKIAVQEANKLGLPIVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VDTN +PDL+DY IPGNDD+ RS+ LFC +A A I+G +SA E Sbjct: 181 PVDTNCDPDLIDYPIPGNDDAIRSVNLFCKTMADAIIEGKEM--------AESAPEEAPI 232 Query: 247 SKEGMQLEEDSQSSESS 263 ++E M E E++ Sbjct: 233 TEEEMNQEIKEIKEEAA 249 >gi|330807781|ref|YP_004352243.1| 30S ribosomal protein S2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375889|gb|AEA67239.1| 30S ribosomal protein S2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 245 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|86150353|ref|ZP_01068579.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839178|gb|EAQ56441.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CF93-6] Length = 262 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 112/262 (42%), Positives = 165/262 (62%), Gaps = 9/262 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEAL 233 Query: 245 VHSKEGMQLEEDSQSSESSVLD 266 + ++ + EE + + ++ + Sbjct: 234 ANEEKEITDEEKKEVLDEAMSE 255 >gi|289423556|ref|ZP_06425357.1| ribosomal protein S2 [Peptostreptococcus anaerobius 653-L] gi|289156058|gb|EFD04722.1| ribosomal protein S2 [Peptostreptococcus anaerobius 653-L] Length = 248 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 146/226 (64%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN +IIDL +TV + +A + + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYKYMQEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA + + + A+R Y VN +WLGGM+TN KT+ IQKLR+LE + Sbjct: 61 AETGKPILFVGTKKQAQEAIKDEAQRCGMYYVNERWLGGMLTNHKTIKTRIQKLRELEAM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + + +++KL++ L GI+DM LP MFV+D +E +AIQEA RL Sbjct: 121 ENDGTFDVLPKKEVIKLRAEKEKLEKFLGGIKDMPELPAAMFVIDPRKENIAIQEAHRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ VDTN +P+ +DY IP NDD+ R+I L +A+A I+ Sbjct: 181 IPVIGTVDTNCDPEEIDYPIPANDDAIRAIKLITGAMANAVIEARQ 226 >gi|283956580|ref|ZP_06374059.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1336] gi|283791829|gb|EFC30619.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1336] Length = 263 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 116/265 (43%), Positives = 161/265 (60%), Gaps = 4/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ + A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVREAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FVVDT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVVDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + A E Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALPNEEKEIT 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 K+ + D SE + QE Sbjct: 242 DEEKKEVL---DEAMSEEDFSEEQE 263 >gi|229061430|ref|ZP_04198775.1| 30S ribosomal protein S2 [Bacillus cereus AH603] gi|229134634|ref|ZP_04263444.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST196] gi|229168566|ref|ZP_04296289.1| 30S ribosomal protein S2 [Bacillus cereus AH621] gi|228614972|gb|EEK72074.1| 30S ribosomal protein S2 [Bacillus cereus AH621] gi|228648895|gb|EEL04920.1| 30S ribosomal protein S2 [Bacillus cereus BDRD-ST196] gi|228717853|gb|EEL69501.1| 30S ribosomal protein S2 [Bacillus cereus AH603] Length = 228 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 98/224 (43%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV +++A + + D A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYRTMRDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D+E + + Sbjct: 61 DILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERMQEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++ ++L++ L GI+DM GLP +F+VD +E++A+ EAR+L IPI+ Sbjct: 121 FEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFIVDPRKERIAVAEARKLHIPIIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 181 IVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILETKQGEE 224 >gi|319745770|gb|EFV98065.1| 30S ribosomal protein S2 [Streptococcus agalactiae ATCC 13813] Length = 256 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 100/251 (39%), Positives = 165/251 (65%), Gaps = 1/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V E AKR+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVAEEAKRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFELLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + ++ Sbjct: 181 IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADIDFAQEAQA 240 Query: 242 ETVVHSKEGMQ 252 +++ E ++ Sbjct: 241 DSIEEIVEVVE 251 >gi|119471167|ref|ZP_01613699.1| 30S ribosomal subunit protein S2 [Alteromonadales bacterium TW-7] gi|119445823|gb|EAW27105.1| 30S ribosomal subunit protein S2 [Alteromonadales bacterium TW-7] Length = 242 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 115/226 (50%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNNALKFLSGA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G++LFV TK ASD V EAA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AANKGKVLFVGTKRAASDAVKEAAIASDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTNSNPD VD+++PGNDD+ R++ L+ VA+A +G Sbjct: 181 IPVVAIVDTNSNPDGVDFIVPGNDDAIRAVTLYTSAVAAAITEGRE 226 >gi|87199390|ref|YP_496647.1| 30S ribosomal protein S2 [Novosphingobium aromaticivorans DSM 12444] gi|123763562|sp|Q2G8L0|RS2_NOVAD RecName: Full=30S ribosomal protein S2 gi|87135071|gb|ABD25813.1| SSU ribosomal protein S2P [Novosphingobium aromaticivorans DSM 12444] Length = 251 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 124/238 (52%), Positives = 172/238 (72%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T+ QL+E+G FGH+ WNP+M+ YIF RN HI+DLSQTVP++ +AL+ IS Sbjct: 1 MAAPVVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHILDLSQTVPLMARALEFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV GG++LFV TK QA + + +AA+ S Q+ VN +WLGGM+TNWKT+S SI++ + LE Sbjct: 61 ATVQAGGKVLFVGTKRQAQEPIAQAARASGQHYVNHRWLGGMLTNWKTISGSIKRFKALE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L + G TKKE L + R+RDK + +L GIRDMGG+PD+MFV+D N+E+LAI+EA L Sbjct: 121 EQLAGDTAGLTKKEVLQLTRERDKFELSLGGIRDMGGIPDVMFVIDANKEELAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP+VA++D+N +P+ + + IP NDD+SR+I L+C+ VA+AA G GAD Sbjct: 181 GIPVVAILDSNVSPEGIAFPIPANDDASRAIRLYCEAVAAAATKGGRDAALASGADLG 238 >gi|262166337|ref|ZP_06034074.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus VM223] gi|262170771|ref|ZP_06038449.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus MB-451] gi|261891847|gb|EEY37833.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus MB-451] gi|262026053|gb|EEY44721.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus VM223] Length = 242 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 164/240 (68%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 1 MASVSMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + VA A +G + + + Sbjct: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEAINEGRNKDVAVVAEKDGFVE 240 >gi|329767061|ref|ZP_08258589.1| 30S ribosomal protein S2 [Gemella haemolysans M341] gi|328837786|gb|EGF87411.1| 30S ribosomal protein S2 [Gemella haemolysans M341] Length = 245 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 103/245 (42%), Positives = 155/245 (63%), Gaps = 4/245 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ Sbjct: 61 ADQGGKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRIAEIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ DKL + L GIR+M G+PD +FVVD +E AI EA++L Sbjct: 121 EADGVFEVLPKKEVIELRKEYDKLNKFLGGIREMKGMPDAIFVVDPKKEHNAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI---DGIARQHSYMGADTK 238 IP+V +VDTN +PD VDYVIP NDD+ R++ L +A A + +G + Sbjct: 181 IPVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTAKMADAFVAYNEGNIEETEEAFVKEV 240 Query: 239 SAGET 243 A E Sbjct: 241 EATEE 245 >gi|254448771|ref|ZP_05062228.1| ribosomal protein S2 [gamma proteobacterium HTCC5015] gi|198261612|gb|EDY85900.1| ribosomal protein S2 [gamma proteobacterium HTCC5015] Length = 307 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 115/259 (44%), Positives = 167/259 (64%), Gaps = 5/259 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ WNPKM +YIF ERN HII+L +T+P+ A+ +S Sbjct: 1 MAKVTMRQMLEAGVHFGHQTRFWNPKMGQYIFGERNKIHIINLEKTMPLFDDAMNYLSKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK A D V E A+R+ V+ +WLGGM+TN+ TV +SI++L+D+EE Sbjct: 61 ASQNGKILFVGTKRAARDIVREEAQRAGMPYVDQRWLGGMLTNFPTVKKSIRRLKDIEEQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + + KKE L + R+ DKL+R+L GIRDM LPD +F+VD EK+A+ EA +L Sbjct: 121 LKDGTAEHLNKKETLLMTREADKLERSLGGIRDMERLPDCLFIVDNGYEKIAVNEAVKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V+VVDTN+ +DY IPGNDD+ R+I L+ A A ++G RQ + + K G Sbjct: 181 IPVVSVVDTNNPLVNIDYPIPGNDDAIRAIKLYVSAAADAVLEG--RQSAQIATPDK--G 236 Query: 242 ETVVHSKEGMQLEEDSQSS 260 + V E E++ Sbjct: 237 DDFVEVSEEAAPAEETPKP 255 >gi|329769641|ref|ZP_08261045.1| 30S ribosomal protein S2 [Gemella sanguinis M325] gi|328838396|gb|EGF88005.1| 30S ribosomal protein S2 [Gemella sanguinis M325] Length = 244 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 101/222 (45%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ Sbjct: 61 ADQGGKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRIAEIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ DKL + L GIRDM G+PD +FVVD +E AI EA++L Sbjct: 121 EADGVFEVLPKKEVIELRKEYDKLNKFLGGIRDMKGMPDAIFVVDPKKEHNAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP+V +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 181 IPVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTSKMADAFV 222 >gi|152991279|ref|YP_001357001.1| 30S ribosomal protein S2 [Nitratiruptor sp. SB155-2] gi|166225288|sp|A6Q585|RS2_NITSB RecName: Full=30S ribosomal protein S2 gi|151423140|dbj|BAF70644.1| 30S ribosomal protein S2 [Nitratiruptor sp. SB155-2] Length = 267 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 108/222 (48%), Positives = 148/222 (66%), Gaps = 1/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+ +IF R N HIIDL +T+ + ++ D Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKPFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAKE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK QA + + E AK+ VNS+WLGG +TN+ T+ +SI+KL +EE+ Sbjct: 62 GKTILFVGTKKQAKNAIEEYAKKCGMPYVNSRWLGGTLTNFNTIKKSIRKLEIIEEMEKT 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL+ L GIRDM GLPD++F++D RE +A++E +L IPI Sbjct: 122 GQMDLLTKKEALMLRRKKEKLENFLGGIRDMKGLPDMLFIIDAVREHIAVKEGNKLGIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VA +DTN +PDL+DY IPGNDD+ RSI LFC +A A I+G Sbjct: 182 VAPLDTNCDPDLIDYPIPGNDDAIRSIQLFCKEMAEAIIEGK 223 >gi|42527848|ref|NP_972946.1| 30S ribosomal protein S2 [Treponema denticola ATCC 35405] gi|61215634|sp|Q73K75|RS2_TREDE RecName: Full=30S ribosomal protein S2 gi|41818676|gb|AAS12865.1| ribosomal protein S2 [Treponema denticola ATCC 35405] Length = 291 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 104/276 (37%), Positives = 175/276 (63%), Gaps = 9/276 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + + T Sbjct: 1 MAVVTMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK QA + + A+R + +N++WLGGM+TN+ T+ +S+ +L+ +E++ Sbjct: 61 TSEGKSVLFVGTKKQAQQTIQKEAERCGMFYINNRWLGGMLTNFSTIKKSLARLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE ++++++ KL++ L GI++M LP ++F++DT +E++AI+EAR L Sbjct: 121 EVDGTFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+AVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A I+ + + + Sbjct: 181 IPIIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIEADNEHGLKIIENLQEDE 240 Query: 242 ETVVHSKEGMQLEEDS--------QSSESSVLDGQE 269 E+ + Q E+ E+S D E Sbjct: 241 ESGDSGVDPYQDREEEITDYSNYTPKDEASGDDEDE 276 >gi|319779544|ref|YP_004130457.1| SSU ribosomal protein S2p (SAe) [Taylorella equigenitalis MCE9] gi|317109568|gb|ADU92314.1| SSU ribosomal protein S2p (SAe) [Taylorella equigenitalis MCE9] Length = 260 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 120/260 (46%), Positives = 169/260 (65%), Gaps = 4/260 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +LE+GV FGH+ WNPKM YIF +RN HII+L +T+ +AL I T +RG Sbjct: 4 MRDMLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTIEKYLEALAFIRKTASRGE 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + + E A R+ VN++WLGGMMTN+KTV SI++L+D+E N + Sbjct: 64 DILFVGTKRSAREIIAEEASRAGMPYVNNRWLGGMMTNFKTVRSSIKRLKDMEAAQNDGS 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L+ R +KL +++ GI+DM LP +F+VD K+AIQEAR L IP+VA Sbjct: 124 LERLTKKEALDFTRDLEKLNKSIGGIKDMNRLPSALFIVDVGYHKIAIQEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +P+ +DY+IPGNDDSSR++ ++ + VA+A ++G R+ G + E V Sbjct: 184 VVDTNHSPEGIDYIIPGNDDSSRAVQIYAEGVANAILEG--REQRLNGVVEEIQSEDFV- 240 Query: 247 SKEGMQLEEDSQSSESSVLD 266 S E LEE+S + ES + Sbjct: 241 SDEDEVLEEESPNLESEQSE 260 >gi|61215665|sp|Q7MAK0|RS2_WOLSU RecName: Full=30S ribosomal protein S2 gi|34482354|emb|CAE09355.1| 30S RIBOSOMAL PROTEIN S2 [Wolinella succinogenes] Length = 271 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 116/264 (43%), Positives = 167/264 (63%), Gaps = 7/264 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM++YIF R N HIIDL +T+ + V+ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIHIIDLQKTLRYFRYTYNVVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G ++FV TK QAS+ + + A VN +WLGGM+TN+ T+ +SI+KL +EE+ + Sbjct: 62 GKTVMFVGTKKQASETIKQYADTINAPYVNYRWLGGMLTNFSTIKKSIRKLEVIEEMEAS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE+L + RK++KL++ L G+R M PD++FVVD +EK+A+ EARRL IP+ Sbjct: 122 GQIELLTKKEKLMLTRKKEKLEKYLGGVRHMKKAPDMLFVVDAAKEKIAVAEARRLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VD+ IPGNDD+ RSI LFC +A A +G A G++ A E V Sbjct: 182 VAPLDTNCDPDVVDFPIPGNDDAIRSIQLFCKEMAEAIQEGRA----LAGSEEGEATEEV 237 Query: 245 VHSKEGMQLE--EDSQSSESSVLD 266 + E + E ++ S E L Sbjct: 238 TPASEAEKQEVLAEAMSEEGDALQ 261 >gi|86156701|ref|YP_463486.1| 30S ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-C] gi|85773212|gb|ABC80049.1| SSU ribosomal protein S2P [Anaeromyxobacter dehalogenans 2CP-C] Length = 301 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 114/252 (45%), Positives = 166/252 (65%), Gaps = 2/252 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM+ +IF RN +IIDL +TV + + AL+ +SD+VA+GG Sbjct: 1 MKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LFV TK QA D + E A RS Q+ V ++WLGG +TN+KTV Q I +L+ +E++ + Sbjct: 61 SVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE +ER+R+KL++ L GI+++ LP +FV+DT +E +A+ EA RL IP+VA Sbjct: 121 YERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDTKKEHIAVHEANRLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +P+ +DYVIPGNDD+ RSI LF VA A I+G R +++ A+ E Sbjct: 181 VVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGKGRYSAWV-AEHGGHDERREQ 239 Query: 247 SKEGMQLEEDSQ 258 E + Sbjct: 240 EDRDAASERGHK 251 >gi|291542632|emb|CBL15742.1| SSU ribosomal protein S2P [Ruminococcus bromii L2-63] Length = 240 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 152/230 (66%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL ++V L++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKSVKKLEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D V E A+R+ Y VN++WLGGM+TN+ T+ + I +L+ L + Sbjct: 61 SAEGKSVLFVGTKKQAQDSVKEEAERAGAYYVNARWLGGMLTNFATIRRRIARLKQLRAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + + +KL++ + GI+DM +P +F+VD +E++A+ EA++L Sbjct: 121 QEDGTFDLLPKKEVIKLNLEIEKLEKFMGGIKDMTEMPGALFIVDPRKERIAVSEAKKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IPIVA+VDTN +PD +DYVIPGNDD+ R++ L +A+A I+G + Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMANAVIEGREGRMG 230 >gi|218781005|ref|YP_002432323.1| 30S ribosomal protein S2 [Desulfatibacillum alkenivorans AK-01] gi|226697636|sp|B8FGE6|RS2_DESAA RecName: Full=30S ribosomal protein S2 gi|218762389|gb|ACL04855.1| ribosomal protein S2 [Desulfatibacillum alkenivorans AK-01] Length = 294 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 111/242 (45%), Positives = 159/242 (65%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++++LLE+GV FGH+ WNPKM+ YIF RN +I+DL +TV M + A + +SD Sbjct: 1 MVKISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIVDLQKTVRMFRTACEFVSDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V E A R+ Y V+++WLGGM+TN++T+ + I +L L E+ Sbjct: 61 VANGGSVLFVGTKKQAREAVYEEANRAEAYYVHNRWLGGMLTNFQTIKKGIDRLNYLNEI 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LN+ F KKERL +E++R KL L GIR M LP ++F++D E +A++EA+RL Sbjct: 121 KLNETINLFPKKERLKLEKERVKLDANLGGIRTMTKLPSVIFIIDPKNEAIAVREAKRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP VAVVDTN +PD +DYVIPGNDD+ R+I L +A A + G A+ A Sbjct: 181 IPTVAVVDTNCDPDDIDYVIPGNDDAIRAIRLLTSRIAEAVVQGKQIAAERRAAEQDKAA 240 Query: 242 ET 243 + Sbjct: 241 DD 242 >gi|330985108|gb|EGH83211.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 247 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 149/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMASMADAVIRGR 225 >gi|331091301|ref|ZP_08340141.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404462|gb|EGG84006.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 2_1_46FAA] Length = 248 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAMSDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + Sbjct: 61 AAEGGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ DKL++ L GI+DM PD +FVVD +E++ +QEA L Sbjct: 121 SEDGTFDVLPKKEVIEIKKEWDKLEKNLGGIKDMKKAPDAIFVVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVAKMADAVIEA 224 >gi|77457328|ref|YP_346833.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf0-1] gi|123605789|sp|Q3KHB2|RS2_PSEPF RecName: Full=30S ribosomal protein S2 gi|77381331|gb|ABA72844.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf0-1] Length = 245 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|188996518|ref|YP_001930769.1| ribosomal protein S2 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931585|gb|ACD66215.1| ribosomal protein S2 [Sulfurihydrogenibium sp. YO3AOP1] Length = 294 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 116/279 (41%), Positives = 174/279 (62%), Gaps = 3/279 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ + ++R+LLE+GV FGH WNPKM+ YI+ +RN HIIDLS+TVP+ ++AL+ ++ Sbjct: 1 MAV-EISMRELLEAGVHFGHPVRRWNPKMKPYIYTKRNGIHIIDLSKTVPLFRQALEFVT 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + VA G ILF+ TK QA + + E AKR Y VN KWLGGM TN+ TV +SI KLR L+ Sbjct: 60 EQVANGAEILFLGTKKQAQNIIEEEAKRCRAYYVNYKWLGGMFTNFATVKKSIAKLRKLQ 119 Query: 121 ELLNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + + KKE + ++++KL++ L GI DM +PD++FVVDT RE A+ EA + Sbjct: 120 KMEAEGVFEVLPKKEARTLMKQKEKLEKYLKGIVDMDRVPDIIFVVDTVRENNAVTEANK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS-YMGADTK 238 L + +VA+ DTN +PD +DY IPGNDD+ ++I L +A A I+G + S TK Sbjct: 180 LGVRVVAIADTNCDPDKIDYPIPGNDDAIKAIQLITSKIADAVIEGKKMRESIGTAVGTK 239 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + E ++ E + E + +++ V E Sbjct: 240 TIEEELLARAEAANVVESGYMGAKNYSKEDKLSEVVEKE 278 >gi|15639594|ref|NP_219044.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025832|ref|YP_001933604.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum SS14] gi|6094174|sp|O83615|RS2_TREPA RecName: Full=30S ribosomal protein S2 gi|238689332|sp|B2S3J6|RS2_TREPS RecName: Full=30S ribosomal protein S2 gi|3322900|gb|AAC65579.1| ribosomal protein S2 (rpsB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018407|gb|ACD71025.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum SS14] gi|291059977|gb|ADD72712.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum str. Chicago] Length = 291 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 103/258 (39%), Positives = 170/258 (65%), Gaps = 2/258 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TI+ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A ++ T Sbjct: 1 MAVVTIKNLLESGVHFGHQVRRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDMVRRT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ G +LFV TK Q+ + + A+R + V ++WLGGM+TN+ T+ +S+ +L+ +E + Sbjct: 61 VSSGKSVLFVGTKKQSQQTIAKEAQRCGMFYVTNRWLGGMLTNFSTIRKSLSRLKKIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + +KKE ++ ++ KL++ L GI++M LP ++F++DT +E +AI+EARR+ Sbjct: 121 EIDGTFEHLSKKEVASLRKEHAKLEKNLGGIKEMKELPGVVFIIDTRKETIAIREARRVG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAVVDTN NP+ +DY IPGNDD+ R+I+LF L+A+A ++ +H + Sbjct: 181 IPIVAVVDTNCNPEGIDYPIPGNDDAIRAISLFTQLIANAVMEA-GNEHGLKIIENLQDE 239 Query: 242 ETVVHSKEGMQLEEDSQS 259 E+ E + L E+ + Sbjct: 240 ESGDELDESVSLHEEGRE 257 >gi|312959392|ref|ZP_07773909.1| 30S ribosomal protein S2 [Pseudomonas fluorescens WH6] gi|311286109|gb|EFQ64673.1| 30S ribosomal protein S2 [Pseudomonas fluorescens WH6] Length = 245 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|78197212|gb|ABB34977.1| ribosomal protein S2 [Synechococcus sp. CC9605] Length = 256 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 97/239 (40%), Positives = 142/239 (59%), Gaps = 1/239 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + Sbjct: 18 AMAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRS 77 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE Sbjct: 78 AARSGKRFLFVGTKKQASEVVALEAARCGASYVNQRWLGGMLTNWTTMKARIDRLKDLER 137 Query: 122 LLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 138 MESSGAIAMRPKKEGAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRESNAVLEARKL 197 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D++ Sbjct: 198 DIPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRHGSNDQRGGDSEG 256 >gi|289706656|ref|ZP_06503004.1| ribosomal protein S2 [Micrococcus luteus SK58] gi|289556576|gb|EFD49919.1| ribosomal protein S2 [Micrococcus luteus SK58] Length = 282 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 168/251 (66%), Gaps = 4/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ TVS+ +Q++++LEE+ Sbjct: 61 VAHGGTILFVGTKKQAQEAIAEQAGRVGMPYVNHRWLGGMLTNFSTVSKRVQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ G FTKKE L + R+ +KL+ L GIR+M P ++VVDT +E LA+ EA++L Sbjct: 121 DFEDVAGSQFTKKELLLLNRELEKLQANLGGIRNMSKTPSAVWVVDTKKEHLAVDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD V Y IPGNDD+ RS+ L +VA A +G+ + G ++A Sbjct: 181 GIPVVAILDTNCDPDEVAYPIPGNDDAIRSVNLLTRVVADAVAEGLIARQG--GKSGQAA 238 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 239 AEPMAEWEREL 249 >gi|194365044|ref|YP_002027654.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia R551-3] gi|238693464|sp|B4SQ23|RS2_STRM5 RecName: Full=30S ribosomal protein S2 gi|194347848|gb|ACF50971.1| ribosomal protein S2 [Stenotrophomonas maltophilia R551-3] Length = 267 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 105/246 (42%), Positives = 153/246 (62%), Gaps = 1/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 + G +LF+ TK A + + E A+R +N +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAG 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A + Sbjct: 181 IPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYSRAAADAVLEGKAAAPHAATVREEEFA 240 Query: 242 ETVVHS 247 + Sbjct: 241 DAPAED 246 >gi|256823127|ref|YP_003147090.1| 30S ribosomal protein S2 [Kangiella koreensis DSM 16069] gi|256796666|gb|ACV27322.1| ribosomal protein S2 [Kangiella koreensis DSM 16069] Length = 244 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 115/249 (46%), Positives = 163/249 (65%), Gaps = 6/249 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R +L++GV FGH+ WNP+M YIF RN HII+L +TVPM AL + Sbjct: 1 MSKVSMRDMLQAGVHFGHKTRFWNPQMRPYIFGARNKIHIINLEETVPMFNDALNYLGKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK AS+ V E A RS Q+ V+ +WLGGM+TN+KT+ SI +L+DLE+ Sbjct: 61 ASNKGKILFVGTKRAASEIVKEEATRSGQFFVDKRWLGGMLTNYKTIRGSINRLKDLEKQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ ++ GI++MGGLPD++FV+D + E +AI EA ++ Sbjct: 121 SEDGTFERLTKKEALMRRREMEKLEASIGGIKNMGGLPDVLFVIDADHENIAIAEANKMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNSNP VDY+IPGNDD+ R+I L+C VA A +DG A T Sbjct: 181 IPVVAVVDTNSNPKGVDYIIPGNDDAIRAIRLYCAAVADAVLDGKQ-----SSATTADQS 235 Query: 242 ETVVHSKEG 250 + V + E Sbjct: 236 DEFVEADEA 244 >gi|313829426|gb|EFS67140.1| ribosomal protein S2 [Propionibacterium acnes HL063PA2] Length = 277 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 117/283 (41%), Positives = 176/283 (62%), Gaps = 17/283 (6%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T RQLLESGV FGH+ WNPKM+ RN +IIDL Q++ + KA + +T Sbjct: 1 MAVVTTRQLLESGVHFGHQTRRWNPKMK------RNGIYIIDLHQSLTYIDKAYAFVKET 54 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG+ILFV TK QA + ++E A R VN +WLGGM+TN++T+S+ I +L++LE + Sbjct: 55 VAKGGQILFVGTKKQAQESIVEQATRVGMPYVNHRWLGGMLTNFQTISKRIARLKELEAM 114 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL++ L GIRDM +P ++VVDT +E LAI EAR+L Sbjct: 115 DFDKVSGSGLTKKELLMLSREKDKLEKDLGGIRDMPKVPQAVWVVDTKKEHLAIDEARKL 174 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +IP+VA++DTN +PD VDY IPGNDD+ RS++L ++A AA +G+ + + + + Sbjct: 175 KIPVVAILDTNCDPDEVDYAIPGNDDAIRSVSLLTRIIADAAAEGLMARSAGKSGEQPAE 234 Query: 241 GETVVHSK------EGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + + +G + E ++ ++ E PE Sbjct: 235 AEPMPDWERELLEGDGAKTEAKAEEPKAEAKKADE---APEAE 274 >gi|162007985|ref|YP_457642.2| 30S ribosomal protein S2 [Erythrobacter litoralis HTCC2594] gi|209573716|sp|Q2NBU6|RS2_ERYLH RecName: Full=30S ribosomal protein S2 Length = 245 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 123/251 (49%), Positives = 172/251 (68%), Gaps = 6/251 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP++ +AL + Sbjct: 1 MAAPTVTMQQLIEAGSHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVH 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T GG++LFV TK QA + + EAA+ S Q+ VN +WLGGM+TNW+T+S+SI++L+ LE Sbjct: 61 ATANAGGKVLFVGTKRQAQEPIAEAARSSGQHFVNHRWLGGMLTNWQTISKSIKELKSLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ E G TKKE LN+ RKRDKL+ +L GIRDMGG+PD+M V+D N+E LAI+EA L Sbjct: 121 EQLSGETHGLTKKEVLNLTRKRDKLELSLGGIRDMGGVPDVMVVIDANKEDLAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+V ++DTN +P + + +PGNDD++R++ L+CD A AA + GA+ Sbjct: 181 GIPVVGILDTNVDPSGIAFPVPGNDDAARAVRLYCDAFAQAA------SKNGGGANVGEM 234 Query: 241 GETVVHSKEGM 251 V + Sbjct: 235 ENPPVEATADA 245 >gi|228477778|ref|ZP_04062406.1| ribosomal protein S2 [Streptococcus salivarius SK126] gi|312862598|ref|ZP_07722839.1| ribosomal protein S2 [Streptococcus vestibularis F0396] gi|322374178|ref|ZP_08048711.1| ribosomal protein S2 [Streptococcus sp. C150] gi|322517672|ref|ZP_08070535.1| 30S ribosomal protein S2 [Streptococcus vestibularis ATCC 49124] gi|228250470|gb|EEK09684.1| ribosomal protein S2 [Streptococcus salivarius SK126] gi|311101858|gb|EFQ60060.1| ribosomal protein S2 [Streptococcus vestibularis F0396] gi|321276883|gb|EFX53955.1| ribosomal protein S2 [Streptococcus sp. C150] gi|322123660|gb|EFX95252.1| 30S ribosomal protein S2 [Streptococcus vestibularis ATCC 49124] Length = 255 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 165/253 (65%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV M A + + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADTAYEFVREA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V E A R+ QY +N +WLGG +TNW T+ + I +L++++++ Sbjct: 61 AANDAVILFVGTKKQAAEAVAEEATRAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKQM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD++++VD ++E++A++EA++L Sbjct: 121 EADGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVIYIVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNADPDEIDVIIPANDDAIRAVKLITSKMADAIIEGNQGEDASADFQEAAAA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|170287970|ref|YP_001738208.1| ribosomal protein S2 [Thermotoga sp. RQ2] gi|170175473|gb|ACB08525.1| ribosomal protein S2 [Thermotoga sp. RQ2] Length = 262 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGHR WNPKM YI+ ER +IIDL +T +L++A + + Sbjct: 1 MAVVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + A+R + VN++WLGG++TN+KT+ I+KL +LEE+ Sbjct: 61 ASEGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIEKLIELEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE+ I R +KL++ L G+++M +PD++++VD +EK+A+ EA +L Sbjct: 121 EQSGKLDELPKKEQSRIRRILEKLRKNLGGLKEMRKIPDIIYIVDPRKEKIAVAEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPIVA+VDTN +PD +DYVIPGNDD+ RSI L ++A+A ++G Sbjct: 181 IPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIANAYLEGRE 226 >gi|68536252|ref|YP_250957.1| 30S ribosomal protein S2 [Corynebacterium jeikeium K411] gi|260578952|ref|ZP_05846855.1| 30S ribosomal protein S2 [Corynebacterium jeikeium ATCC 43734] gi|123748230|sp|Q4JV18|RS2_CORJK RecName: Full=30S ribosomal protein S2 gi|68263851|emb|CAI37339.1| 30S ribosomal protein S2 [Corynebacterium jeikeium K411] gi|258602926|gb|EEW16200.1| 30S ribosomal protein S2 [Corynebacterium jeikeium ATCC 43734] Length = 277 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 105/225 (46%), Positives = 158/225 (70%), Gaps = 2/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM+R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG IL+V TK QA + V A+R VN +WLGGM+TN++TV++ + +L++L+ + Sbjct: 61 VAHGGNILYVGTKKQAQEAVANEAERVGMPYVNHRWLGGMLTNFQTVAKRLHRLKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ G TKKE L + R+R+KL+R L GI DM P +++VDTN+E +A+ EA++L Sbjct: 121 DAAEDGYKGRTKKEVLMLTRERNKLERVLGGIADMTKTPSALWIVDTNKEHIAVSEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+VA++DTN +PD+VDY IPGNDD+ RS L +++SA G Sbjct: 181 NIPVVAILDTNCDPDVVDYPIPGNDDAIRSANLLTSIISSAVEAG 225 >gi|262393519|ref|YP_003285373.1| 30S ribosomal protein S2p (SAe) [Vibrio sp. Ex25] gi|262337113|gb|ACY50908.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. Ex25] Length = 242 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G + + + Sbjct: 181 IPVYAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEGRNKDVAAVAEKDGFVE 240 >gi|237800144|ref|ZP_04588605.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023001|gb|EGI03058.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 246 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 108/249 (43%), Positives = 154/249 (61%), Gaps = 4/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++G FGH+ WNP M +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGCHFGHQKRYWNPLMAKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ QSI++LR+LE Sbjct: 61 ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNS+P +DY+IPGNDD+ R+I L+ +A A I G +++ G Sbjct: 181 IPVIGIVDTNSSPQGIDYIIPGNDDAIRAIQLYMGSMADAVIRG---RNNVAGGTDVFVE 237 Query: 242 ETVVHSKEG 250 E + EG Sbjct: 238 EAPAAAVEG 246 >gi|166033398|ref|ZP_02236227.1| hypothetical protein DORFOR_03124 [Dorea formicigenerans ATCC 27755] gi|166027755|gb|EDR46512.1| hypothetical protein DORFOR_03124 [Dorea formicigenerans ATCC 27755] Length = 244 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 100/231 (43%), Positives = 150/231 (64%), Gaps = 4/231 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A +SD A+GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYYAVSDIAAQGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+++E + + Sbjct: 61 TILFVGTKKQAQDAIKVEAERCGMYYVNERWLGGMLTNFKTIKSRIARLKEIERMSEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + I+++ +KL++ L GI++M +PD +FVVD +E++ +QEA L IP++ Sbjct: 121 FDVLPKKEVIQIKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICVQEAHTLGIPLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ GAD Sbjct: 181 IADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA---NQGEAGADV 228 >gi|257460586|ref|ZP_05625687.1| ribosomal protein S2 [Campylobacter gracilis RM3268] gi|257441917|gb|EEV17059.1| ribosomal protein S2 [Campylobacter gracilis RM3268] Length = 265 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 110/265 (41%), Positives = 165/265 (62%), Gaps = 2/265 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A Sbjct: 2 VTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ V+ +WLGGM+TN+ T+ QSI+KL +E + Sbjct: 62 GKTILFVGTKKQAGATLKEYAEKCGMPYVSHRWLGGMLTNFSTIKQSIRKLEVIETMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL+ L GIR+M GLPD++FV+D +EK+A+ EA RL++P+ Sbjct: 122 GSINLLTKKEALMLRRKKEKLELYLGGIRNMKGLPDMIFVIDVVKEKIAVAEANRLKMPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A +DTN +PD+VD+ IPGNDD+ RS+ LFC +A A +G A + D + + E V Sbjct: 182 IAPLDTNCDPDVVDFPIPGNDDAIRSVQLFCQEMAEAINEGKALRDQDASEDVEQS-EAV 240 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 ++ + E + V + +E Sbjct: 241 SDEEKEEVVAEAMSEEDFDVNEDEE 265 >gi|315926601|gb|EFV05982.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 260 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 113/262 (43%), Positives = 165/262 (62%), Gaps = 9/262 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A G Sbjct: 1 MRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ + Sbjct: 61 TILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEEDGS 120 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+VA Sbjct: 121 IKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE +V+ Sbjct: 181 PLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEALVN 232 Query: 247 SKEGMQLEEDSQSSESSVLDGQ 268 ++ + EE + + ++ + Sbjct: 233 EEKEITDEEKKEVLDEAMSEED 254 >gi|291459159|ref|ZP_06598549.1| ribosomal protein S2 [Oribacterium sp. oral taxon 078 str. F0262] gi|291418413|gb|EFE92132.1| ribosomal protein S2 [Oribacterium sp. oral taxon 078 str. F0262] Length = 249 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 102/249 (40%), Positives = 153/249 (61%), Gaps = 2/249 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL +TV M+ A ++ Sbjct: 1 MSAIGMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKTVKMVDDAYNAMAQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA D + A R ++ VN +WLGGM+TN+KT+ IQ+L+++E++ Sbjct: 61 VANGGTVLFVGTKKQAQDAIKAEALRCGEFYVNERWLGGMLTNFKTIRSRIQRLKEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ KL+ L GI+DM +PD +FVVD +EK+ +QEA L Sbjct: 121 SEDGTFDVLPKKEVTLLRKEWGKLEANLGGIKDMKAVPDAIFVVDPKKEKICVQEAHALG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 + + + DTN++P+ +DY+IPGNDD+ R+I L +A A I+ + A + G Sbjct: 181 VTLFGIADTNADPEELDYIIPGNDDAIRAIKLIVSKMADAVIEAKQGDMTEEEAAAAAEG 240 Query: 242 -ETVVHSKE 249 E++V E Sbjct: 241 DESLVPEAE 249 >gi|325661862|ref|ZP_08150483.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 4_1_37FAA] gi|331085661|ref|ZP_08334744.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471840|gb|EGC75057.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406584|gb|EGG86089.1| 30S ribosomal protein S2 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 250 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 98/224 (43%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ISD Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAISDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + Sbjct: 61 AAEGGTILFVGTKKQAQDAIKSEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ +KL++ L GI+DM PD +F+VD +E++ +QEA L Sbjct: 121 AEDGTFDVLPKKEVIAIKKEWEKLEKNLGGIKDMKKAPDAIFIVDPKKERICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVAKMADAVIEA 224 >gi|163856847|ref|YP_001631145.1| 30S ribosomal protein S2 [Bordetella petrii DSM 12804] gi|163260575|emb|CAP42877.1| 30S ribosomal protein S2 [Bordetella petrii] Length = 249 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 109/245 (44%), Positives = 158/245 (64%), Gaps = 1/245 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L QTV Q A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQDATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ Sbjct: 64 NILFVGTKRAARELVAAEAARCGMPYVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ +KL +++ GI+DM GLPD +FV+D K+A+ EAR L IP+VA Sbjct: 124 AERMIKKEGLLFQRELEKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +PD +DYVIPGNDDS+++IAL+ +A A ++G + + + + E V Sbjct: 184 VVDTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGREQNLNGLVEEAGEGSEEFVE 243 Query: 247 SKEGM 251 ++ Sbjct: 244 VQDNQ 248 >gi|299534754|ref|ZP_07048084.1| 30S ribosomal protein S2 [Lysinibacillus fusiformis ZC1] gi|209573708|sp|B1HQZ0|RS2_LYSSC RecName: Full=30S ribosomal protein S2 gi|298729842|gb|EFI70387.1| 30S ribosomal protein S2 [Lysinibacillus fusiformis ZC1] Length = 239 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 96/226 (42%), Positives = 152/226 (67%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + + A+RS Y +N +WLGG +TN+ T+ + + +++ +E++ Sbjct: 61 GQDGGKVLFVGTKKQAQEAIKDEAERSGNYYINQRWLGGTLTNFGTIQKRVARMKQIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EAR+L Sbjct: 121 EEEGTFEVLPKKEVIQLKKEHERLIKFLGGIRDMHDLPDVMFVVDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+V +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IPLVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALIESKQ 226 >gi|260775285|ref|ZP_05884182.1| SSU ribosomal protein S2p (SAe) [Vibrio coralliilyticus ATCC BAA-450] gi|260608466|gb|EEX34631.1| SSU ribosomal protein S2p (SAe) [Vibrio coralliilyticus ATCC BAA-450] Length = 242 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAVASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VD+VIPGNDD+ R++ L+ + ASA +G + + Sbjct: 181 IPVYAVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAAASAVTEGRNKDVAAAAEKDGFVE 240 >gi|241662943|ref|YP_002981303.1| 30S ribosomal protein S2 [Ralstonia pickettii 12D] gi|309782137|ref|ZP_07676867.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA] gi|240864970|gb|ACS62631.1| ribosomal protein S2 [Ralstonia pickettii 12D] gi|308919203|gb|EFP64870.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA] Length = 247 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 114/247 (46%), Positives = 163/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM YIF RN HII+L +T+PM Q AL+ + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPMYQDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDMEVAKE 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ DKL +++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGATETMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + G+ Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGGDD 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|70728558|ref|YP_258307.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf-5] gi|123748533|sp|Q4KHH6|RS2_PSEF5 RecName: Full=30S ribosomal protein S2 gi|68342857|gb|AAY90463.1| ribosomal protein S2 [Pseudomonas fluorescens Pf-5] Length = 245 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM +AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225 >gi|160947372|ref|ZP_02094539.1| hypothetical protein PEPMIC_01306 [Parvimonas micra ATCC 33270] gi|158446506|gb|EDP23501.1| hypothetical protein PEPMIC_01306 [Parvimonas micra ATCC 33270] Length = 275 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 102/230 (44%), Positives = 156/230 (67%), Gaps = 2/230 (0%) Query: 3 LPQFT-IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + Q ++ LLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV +++A + + Sbjct: 25 MSQVILMKNLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKQIEQAYDFVRE 84 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 VA GGR+LFV TK QA + V AKRS Q+ V+ +WLGGM+TN+KT+ + I++L+ LE Sbjct: 85 IVADGGRVLFVGTKKQAQEAVETEAKRSGQFYVSHRWLGGMLTNYKTIRKRIERLKKLEL 144 Query: 122 L-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + Q KKE + ++R+ +KL++ L GI++M LPD++FV+D EK+A+ EA+ L Sbjct: 145 MEEDGTFQRLPKKEVIKLKREAEKLEKFLGGIKEMDKLPDVLFVIDPKNEKIAVNEAKIL 204 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP++ VVDTN +PD VD IPGNDD+ R++ L +A+A ++ + Sbjct: 205 GIPVIGVVDTNCDPDEVDIAIPGNDDAIRAVKLLTGTIANAIVEAKQGEQ 254 >gi|153952052|ref|YP_001397722.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. doylei 269.97] gi|166225256|sp|A7H2J2|RS2_CAMJD RecName: Full=30S ribosomal protein S2 gi|152939498|gb|ABS44239.1| ribosomal protein S2 [Campylobacter jejuni subsp. doylei 269.97] Length = 263 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 113/264 (42%), Positives = 165/264 (62%), Gaps = 9/264 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGALKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEAL 233 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 + ++ + EE + + S+ + Sbjct: 234 PNEEKEITDEEKKEVLDESMSEED 257 >gi|239917202|ref|YP_002956760.1| SSU ribosomal protein S2P [Micrococcus luteus NCTC 2665] gi|281414325|ref|ZP_06246067.1| 30S ribosomal protein S2 [Micrococcus luteus NCTC 2665] gi|259495219|sp|C5C9Q4|RS2_MICLC RecName: Full=30S ribosomal protein S2 gi|239838409|gb|ACS30206.1| SSU ribosomal protein S2P [Micrococcus luteus NCTC 2665] Length = 285 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 168/251 (66%), Gaps = 4/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + +T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ TVS+ +Q++++LEE+ Sbjct: 61 VAHGGTILFVGTKKQAQEAIAEQAGRVGMPYVNHRWLGGMLTNFSTVSKRVQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ G FTKKE L + R+ +KL+ L GIR+M P ++VVDT +E LA+ EA++L Sbjct: 121 DFEDVAGSQFTKKELLLLNRELEKLQANLGGIRNMAKTPSAVWVVDTKKEHLAVDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD V Y IPGNDD+ RS+ L +VA A +G+ + G ++A Sbjct: 181 GIPVVAILDTNCDPDEVAYPIPGNDDAIRSVNLLTRVVADAVAEGLIARQG--GKSGQAA 238 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 239 AEPMAEWEREL 249 >gi|154504620|ref|ZP_02041358.1| hypothetical protein RUMGNA_02126 [Ruminococcus gnavus ATCC 29149] gi|153795102|gb|EDN77522.1| hypothetical protein RUMGNA_02126 [Ruminococcus gnavus ATCC 29149] Length = 244 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V M+ A + +SD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYKAVSDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + + Sbjct: 61 TILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERMAEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + ++++ +KL++ L GI++M +PD +F+VD +E++ +QEA L IP++ Sbjct: 121 FDVLPKKEVIELKKEWEKLEKNLGGIKEMKKIPDAIFIVDPKKERICVQEAHTLGIPLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 ICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 219 >gi|126736489|ref|ZP_01752230.1| ribosomal protein S2 [Roseobacter sp. CCS2] gi|126714027|gb|EBA10897.1| ribosomal protein S2 [Roseobacter sp. CCS2] Length = 253 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 135/235 (57%), Positives = 181/235 (77%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM++YI+ RN HI+DL+QTVPML +ALQV+ DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQTARWNPKMDQYIYGSRNGIHIMDLTQTVPMLDQALQVVRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA+ +MEAA++SAQ+ +N +WLGG +TNW+TVSQSI +L+ ++E Sbjct: 61 RVLFVGTKRQAAKPIMEAAEKSAQFYMNHRWLGGTLTNWQTVSQSINRLKAIDEASANGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E LAI EA +L IP+VA+ Sbjct: 121 AGLTKKERLGMEREQGKLQASLGGIREMGGVPDLLFVIDCNKEDLAIAEANKLGIPVVAI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 VDTN +P VDYVIPGNDD++R+IAL+ DL A AA+DG+ Q G D + Sbjct: 181 VDTNCSPAGVDYVIPGNDDAARAIALYTDLAARAALDGMTAQMGAAGIDMGEMED 235 >gi|306820321|ref|ZP_07453960.1| 30S ribosomal protein S2 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551650|gb|EFM39602.1| 30S ribosomal protein S2 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 259 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 96/226 (42%), Positives = 149/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM ++IF ERN +IIDL +TV L++A +++ Sbjct: 11 MSIISMKQLLEAGVHFGHQTRRWNPKMAKFIFAERNGIYIIDLQKTVKKLEEAYNFMTEV 70 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA D + + A R+ Y VN +WLGGM+TN+KT+ I +L +LE + Sbjct: 71 AATGKPILFVGTKKQAQDAIKDEALRAGMYYVNERWLGGMLTNYKTIKTRINRLVELERM 130 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++++KL++ L GI++M LP MFV+D +E++A+ EA +L Sbjct: 131 QEDGTFDKLPKKEVIGLLQEKEKLEKNLGGIKEMPELPVAMFVIDPKKERIAVLEAHKLG 190 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ VVDTN +PD +D+ IPGNDD+ R++ L ++ A I+ Sbjct: 191 IPVIGVVDTNCDPDEIDFPIPGNDDAIRAVKLIVSAMSQAIIEAKQ 236 >gi|226324761|ref|ZP_03800279.1| hypothetical protein COPCOM_02547 [Coprococcus comes ATCC 27758] gi|225207209|gb|EEG89563.1| hypothetical protein COPCOM_02547 [Coprococcus comes ATCC 27758] Length = 252 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 98/232 (42%), Positives = 152/232 (65%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q +SD Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYQAVSDI 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 66 AAEGGKILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKEIEAM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ +KL++ L GI++M +PD +FVVD +E++ +QEA L Sbjct: 126 SEDGTFDVLPKKEVIEIKKEWEKLEKNLGGIKEMKRIPDAIFVVDPKKERICVQEAHTLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + + Sbjct: 186 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQGEAEEV 237 >gi|206895757|ref|YP_002247086.1| ribosomal protein S2 [Coprothermobacter proteolyticus DSM 5265] gi|238054499|sp|B5Y8I9|RS2_COPPD RecName: Full=30S ribosomal protein S2 gi|206738374|gb|ACI17452.1| ribosomal protein S2 [Coprothermobacter proteolyticus DSM 5265] Length = 268 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 97/256 (37%), Positives = 157/256 (61%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM+ +I+ ERN +IIDL +T L+ A + D Sbjct: 1 MAVVTLKQLLEAGVHFGHQTRRWNPKMKPFIYAERNGIYIIDLQKTYEQLEAAYSFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + E A+R+ VN +W+GG +TN++T+ I+K ++L L Sbjct: 61 SKEGKTVLFVGTKRQAQEPIREEAERAGMPYVNQRWIGGFLTNFRTIRTRIKKYKELLAL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KE+ + R+ +KL + G++DM LPD++FVVDT +E+ AI+EA+++ Sbjct: 121 REQGYIESLDYKEQKRVMRELEKLDKYYSGVKDMDTLPDILFVVDTKKEEAAIREAKKIG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN +PDLVDY IP NDD+ R+I L +A A ++G + + ++ + A Sbjct: 181 IPVVAMIDTNCDPDLVDYPIPANDDAVRAIKLITSKIADAILEGREGRQGIVSSEGQQAS 240 Query: 242 ETVVHSKEGMQLEEDS 257 + + E + Sbjct: 241 MEEIAEELEAIDETEK 256 >gi|94263229|ref|ZP_01287046.1| Ribosomal protein S2 [delta proteobacterium MLMS-1] gi|93456447|gb|EAT06567.1| Ribosomal protein S2 [delta proteobacterium MLMS-1] Length = 270 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 103/260 (39%), Positives = 159/260 (61%), Gaps = 2/260 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P ++R++LE+G+ FGH+ WNPKM+ YIF RN +II+L +T+P+ Q+A + ++ Sbjct: 7 PSISMREMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFQRATEYVARKA 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A+GG ILFV TK QA D V E A+R Y VN +WLGGM+TN +T+ +S+ +L+ + Sbjct: 67 AKGGSILFVGTKRQAQDIVREEAERCGMYFVNHRWLGGMLTNHQTIKKSVDRLKSYTSMQ 126 Query: 124 NKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + KKE + I+++ KL+R L GI++M LP +FVVD RE +A+ EA RL + Sbjct: 127 EDGSIHRYKKKEIMMIQKETLKLERNLGGIKEMKSLPAAIFVVDPKREDIAVTEANRLGV 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA+ DTN +P +DY+IPGNDD+ +SI L C +A A + G H+ Sbjct: 187 PVVAIADTNCDPTGIDYLIPGNDDAIKSIRLVCSKLADAILAGK-ESHAMAQQAAADKAA 245 Query: 243 TVVHSKEGMQLEEDSQSSES 262 V + + + + E+ Sbjct: 246 EVEVTAAADETGQPEPAGEA 265 >gi|255323536|ref|ZP_05364667.1| ribosomal protein S2 [Campylobacter showae RM3277] gi|255299573|gb|EET78859.1| ribosomal protein S2 [Campylobacter showae RM3277] Length = 266 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 111/265 (41%), Positives = 164/265 (61%), Gaps = 1/265 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + V+ D A Sbjct: 2 VTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNVVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + Sbjct: 62 GKTILFVGTKKQAGATLKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEAMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL +L GIR++ +PD++FV+DT +EK+A+QEA RL+IP+ Sbjct: 122 GSINLLTKKEALMLRRKKEKLLASLGGIRNLKTVPDMIFVIDTVKEKIAVQEANRLKIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD++D+ IPGNDD+ RS+ LFC +A A I+G ++ G + Sbjct: 182 VAPIDTNCDPDVIDFPIPGNDDAIRSVQLFCQEMAEAIIEGRSQLEKDGGEQEEGKEAVS 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 K+ + E ++ + +E Sbjct: 242 QAEKDAVVNEAVNEDFSEDFSEDEE 266 >gi|254229485|ref|ZP_04922899.1| ribosomal protein S2 [Vibrio sp. Ex25] gi|151937950|gb|EDN56794.1| ribosomal protein S2 [Vibrio sp. Ex25] Length = 253 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 12 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE Sbjct: 72 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLETQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 132 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G + + + Sbjct: 192 IPVYAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEGRNKDVAAVAEKDGFVE 251 >gi|113868034|ref|YP_726523.1| 30S ribosomal protein S2 [Ralstonia eutropha H16] gi|123133954|sp|Q0KA16|RS2_RALEH RecName: Full=30S ribosomal protein S2 gi|113526810|emb|CAJ93155.1| SSU ribosomal protein S2 [Ralstonia eutropha H16] Length = 248 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 107/247 (43%), Positives = 161/247 (65%), Gaps = 1/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q A++ + A Sbjct: 2 SVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K+A+ EA +L +P Sbjct: 122 AGALETMSKKEALMFEREMLKLEKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEANKLGVP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + + Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEVVEAARGGDDE 241 Query: 244 VVHSKEG 250 V +EG Sbjct: 242 FVEVQEG 248 >gi|71282500|ref|YP_268295.1| 30S ribosomal protein S2 [Colwellia psychrerythraea 34H] gi|123733781|sp|Q485H0|RS2_COLP3 RecName: Full=30S ribosomal protein S2 gi|71148240|gb|AAZ28713.1| ribosomal protein S2 [Colwellia psychrerythraea 34H] Length = 242 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 167/227 (73%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+++IF R+ HII+L QTVPM +AL +++ Sbjct: 1 MSNVSMRDMLKAGVHFGHKTRYWNPKMKQFIFGARDKVHIINLEQTVPMFNEALAFVNNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK ASD + +AA +S Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSKKGKVLFVGTKRAASDAIKDAAIKSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL ++L GI++MGGLPD++F++D + E +AI+EA L Sbjct: 121 STDGTFEALTKKEALMRTREMEKLDKSLGGIKNMGGLPDVLFIIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+++VVDTNSNPD VDYV+PGNDD+ R++ L+CD VA++ + G + Sbjct: 181 IPVISVVDTNSNPDGVDYVVPGNDDAIRAVTLYCDAVANSVLSGREQ 227 >gi|330836657|ref|YP_004411298.1| 30S ribosomal protein S2P [Spirochaeta coccoides DSM 17374] gi|329748560|gb|AEC01916.1| SSU ribosomal protein S2P [Spirochaeta coccoides DSM 17374] Length = 326 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 109/272 (40%), Positives = 162/272 (59%), Gaps = 19/272 (6%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L T++ LLESGV FGH+ WNPKM +YIF ERN HIIDL +T + +A I Sbjct: 19 LSVVTMKSLLESGVHFGHQTKRWNPKMAKYIFQERNGIHIIDLQKTSACIIEAYDAIRAQ 78 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILF+ TK QA + A R VN++WLGGM+TN+ T+ +SI L+ +E++ Sbjct: 79 VRNGKSILFIGTKKQAQQTIESEANRCGMPYVNNRWLGGMLTNFTTIKKSIATLKKIEKM 138 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE + +++ KL++ L GI+DM LP +F++DT +E +A+ EA RL Sbjct: 139 EVDGTFDSLTKKEISLLTKEKTKLEKNLGGIKDMTSLPGAVFIIDTKKEAIAVAEANRLG 198 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +P +DY IPGNDD+ R+I LF +++A+A +D + Sbjct: 199 IPVVAVVDTNCDPTNIDYPIPGNDDAIRAIQLFTEIIANAVVD--------------ADN 244 Query: 242 ETVVHSKEGMQLEED----SQSSESSVLDGQE 269 E + E + LE+D + +++ S G + Sbjct: 245 EAGIQIIESLPLEDDLHAMAPAADVSADAGSD 276 >gi|269960591|ref|ZP_06174963.1| 30S ribosomal protein S2 [Vibrio harveyi 1DA3] gi|269834668|gb|EEZ88755.1| 30S ribosomal protein S2 [Vibrio harveyi 1DA3] Length = 253 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 12 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+D E Sbjct: 72 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 132 AQDGTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G + + + Sbjct: 192 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVSEGRNKDVAAVAEKDGFVE 251 >gi|320535430|ref|ZP_08035539.1| ribosomal protein S2 [Treponema phagedenis F0421] gi|320147717|gb|EFW39224.1| ribosomal protein S2 [Treponema phagedenis F0421] Length = 292 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 175/277 (63%), Gaps = 1/277 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + T Sbjct: 1 MAVVTMKNLLESGVHFGHQVRRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDAVRKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +A G +LFV TK QA + + A+R + VN++WLGGM+TN+ T+ +S+ +L+ +E++ Sbjct: 61 MADGKSVLFVGTKKQAQQTIAKEAERCGMFYVNNRWLGGMLTNFSTIKKSLGRLKRIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE ++++++ KL++ L GI++M LP ++F++DT +E +AI EAR++ Sbjct: 121 EVDGTFDSLTKKEIASLQKEKAKLEKNLGGIKEMKDLPGIIFIIDTRKETIAINEARKMN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+AVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A I+ + + + Sbjct: 181 IPIIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTQIIANAVIEADNETGLKIIENLQDDE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E S+ + + + ++ S E E S Sbjct: 241 EGFSDSEIDPYQDREEEITDYSNYTPTEETKASEEES 277 >gi|325679340|ref|ZP_08158925.1| ribosomal protein S2 [Ruminococcus albus 8] gi|324108937|gb|EGC03168.1| ribosomal protein S2 [Ruminococcus albus 8] Length = 242 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV L++A I + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLEEAYMFIRNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK QA D + E A R+ + VN++WLGGMMTN+KT+ Q I++L L + Sbjct: 61 SAEGQEVLFVGTKKQAGDSIKEEALRANAHYVNARWLGGMMTNFKTIEQRIKRLEQLHAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++ + +KL++ + GI++M LP +FVVD +EK+A+ EA++L Sbjct: 121 EEDGTFDLLPKKEVTKLKLEIEKLEKFMGGIKNMKKLPGALFVVDPRKEKIAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A+A I+G Sbjct: 181 IPVVAIVDTNCDPDDVDYVIPGNDDAIRAVKLIAGCMANAIIEGRQ 226 >gi|297571167|ref|YP_003696941.1| ribosomal protein S2 [Arcanobacterium haemolyticum DSM 20595] gi|296931514|gb|ADH92322.1| ribosomal protein S2 [Arcanobacterium haemolyticum DSM 20595] Length = 271 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++RQLLE+GV FGH+ WNPKM+R+I ERN +IIDL +TV + K + + +T Sbjct: 1 MAVVSMRQLLEAGVHFGHQTRRWNPKMKRFILTERNGIYIIDLRKTVEDINKTYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-- 120 VA GG ILFV TK QA + E A+R VN +WLGGM+TN+ TV+ IQ+L++LE Sbjct: 61 VAHGGNILFVGTKRQAQQPIREQAERVGMPYVNERWLGGMLTNFTTVASRIQRLKELEII 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + FTKKE L + R+++KL+R L GIRDM +P +++VDTN+E LA+ EA++L Sbjct: 121 DFDDVAGSKFTKKELLMMRREKEKLERTLGGIRDMAKVPSAIWIVDTNKEHLAVAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAV+DTN +PD VDY IPGNDD+ RSI + +VA A +G+ + + + Sbjct: 181 NIPVVAVLDTNCDPDSVDYGIPGNDDAIRSIEILTRVVADAVAEGLMARGGGKNTEAEPM 240 Query: 241 GETVVH 246 E Sbjct: 241 PEWERE 246 >gi|254492638|ref|ZP_05105809.1| ribosomal protein S2 [Methylophaga thiooxidans DMS010] gi|224462159|gb|EEF78437.1| ribosomal protein S2 [Methylophaga thiooxydans DMS010] Length = 245 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 118/246 (47%), Positives = 168/246 (68%), Gaps = 7/246 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM ++IF +RNN HII+L Q++P+ AL +S ++ G Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMGQFIFGKRNNIHIINLEQSLPLFNDALNFVSKLASQKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 RILFV TK A D + E A+R+ VN +WLGGM+TN++TV QSI++L ++E++ + Sbjct: 61 RILFVGTKRAAQDAIREDAERAGMPYVNRRWLGGMLTNYQTVRQSIKRLDAIQEMMESGK 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +G KKE L++ R++DKL++++ GIR MGGLPD MFV+D E +A++EAR+L IP++A Sbjct: 121 TEGLKKKEILDLTREQDKLEKSIGGIRKMGGLPDAMFVIDVEHESIAVKEARKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVD+NS+PD VDYVIPGNDDS R+I L+ A A ++G A T A E V Sbjct: 181 VVDSNSDPDGVDYVIPGNDDSMRAIRLYTANFADAILEGRA------SVTTADANEEFVE 234 Query: 247 SKEGMQ 252 E Sbjct: 235 VAEESA 240 >gi|91223473|ref|ZP_01258738.1| 30S ribosomal protein S2 [Vibrio alginolyticus 12G01] gi|91191559|gb|EAS77823.1| 30S ribosomal protein S2 [Vibrio alginolyticus 12G01] Length = 242 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G + + + Sbjct: 181 IPVYAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEGRNKDVAAVAEKDGFVE 240 >gi|298501731|ref|YP_003723671.1| 30S ribosomal protein S2 [Streptococcus pneumoniae TCH8431/19A] gi|307068825|ref|YP_003877791.1| hypothetical protein SPAP_2258 [Streptococcus pneumoniae AP200] gi|298237326|gb|ADI68457.1| 30S ribosomal protein S2 [Streptococcus pneumoniae TCH8431/19A] gi|306410362|gb|ADM85789.1| hypothetical protein SPAP_2258 [Streptococcus pneumoniae AP200] Length = 286 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 28 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 87 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 88 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 147 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 148 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 207 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 208 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFAAS 267 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 268 ETQADSIEEI 277 >gi|258627350|ref|ZP_05722134.1| 30S ribosomal protein S2 [Vibrio mimicus VM603] gi|258580388|gb|EEW05353.1| 30S ribosomal protein S2 [Vibrio mimicus VM603] Length = 268 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 163/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+++IF RN +II+L +TVPM +AL ++ Sbjct: 27 MASVSMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVYIINLEKTVPMFNEALAELAKV 86 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE Sbjct: 87 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 146 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 147 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 206 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + VA A +G + + + Sbjct: 207 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEAINEGRNKDVAVVAEKDGFVE 266 >gi|254428035|ref|ZP_05041742.1| ribosomal protein S2 [Alcanivorax sp. DG881] gi|196194204|gb|EDX89163.1| ribosomal protein S2 [Alcanivorax sp. DG881] Length = 247 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 116/247 (46%), Positives = 159/247 (64%), Gaps = 4/247 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM YIF RN HII+L QT+P+ A+ ++ A Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMNAYIFGARNKIHIINLEQTLPLFNDAMAFLNKLAASNN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK A V E A+R V+ +WLGGM+TNWKT+ QSI++ R+LE + + Sbjct: 61 KILFVGTKRAAQKAVSEEAQRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRELEAQFQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L +R+ DKL+R++ GI+DMGGLPD +FV+D + E +A+QEAR+L IP+VA Sbjct: 121 FDKLTKKEALMRKREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIALQEARKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---TKSAGET 243 VVDTNSNPD VDYVIPGNDD+ R+I L+ A ++G + G + + A E Sbjct: 181 VVDTNSNPDGVDYVIPGNDDAIRAIQLYVKAAADVILEGKQYAQNQTGGESEFVEVADEA 240 Query: 244 VVHSKEG 250 EG Sbjct: 241 QGEKAEG 247 >gi|304316878|ref|YP_003852023.1| ribosomal protein S2 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778380|gb|ADL68939.1| ribosomal protein S2 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 235 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 153/229 (66%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIEEAYDFIKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V+ G +LFV TK QA D V E A+R Y VN +WLGGM+TN+KT+ +++L++L+ + Sbjct: 61 VSNNGTVLFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNYKTIRSRVERLKELKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++++KL++ L GI +M G+P ++FVVD +E +AI EA+ L Sbjct: 121 EEDGTFDVLPKKEVIKLKKEKEKLEKYLGGIENMNGIPSVLFVVDPKKEAIAIAEAKNLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +P+ VDY IPGNDD+ R++ L +A A I+ + Sbjct: 181 IPIVAIVDTNCDPEEVDYPIPGNDDAIRAVKLIASKIADAVIEAKQGEQ 229 >gi|241889646|ref|ZP_04776944.1| ribosomal protein S2 [Gemella haemolysans ATCC 10379] gi|241863268|gb|EER67652.1| ribosomal protein S2 [Gemella haemolysans ATCC 10379] Length = 244 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ Sbjct: 61 ADQGGKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRITEIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ DKL + L GIR+M G+PD +FVVD +E AI EA++L Sbjct: 121 EADGVFEVLPKKEVIELRKEYDKLVKFLGGIREMKGMPDAIFVVDPKKEHNAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP+V +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 181 IPVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTAKMADAFV 222 >gi|153835674|ref|ZP_01988341.1| ribosomal protein S2 [Vibrio harveyi HY01] gi|148867698|gb|EDL66967.1| ribosomal protein S2 [Vibrio harveyi HY01] Length = 242 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+D E Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G + + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEGRNKDVAAVAEKDGFVE 240 >gi|325971046|ref|YP_004247237.1| ribosomal protein S2 [Spirochaeta sp. Buddy] gi|324026284|gb|ADY13043.1| ribosomal protein S2 [Spirochaeta sp. Buddy] Length = 296 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 103/274 (37%), Positives = 166/274 (60%), Gaps = 5/274 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ WNPKM R+IF +RN HIIDL +T + +A + Sbjct: 1 MSVVTMKSLLESGVHFGHQTKRWNPKMARFIFSQRNGIHIIDLQKTSACIVEAYDAVRAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V +G +LFV TK QA + AKR VN++WLGGM+TN+ T+ +SI L+ +E++ Sbjct: 61 VKQGKTVLFVGTKKQAQQAIEAEAKRCGMPYVNNRWLGGMLTNFSTIKKSIATLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE + +++ KL++ L GI+DM LP +F++DT +E +A+ EA+RL Sbjct: 121 EIDGTFDSLTKKEVSLLTKQKIKLEKNLGGIKDMKDLPGALFIIDTKKEAIAVTEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN +P + Y IPGNDD+ R+I+LF +++A+A +D + + Sbjct: 181 IPVIAVVDTNCDPSDITYPIPGNDDAIRAISLFVEIIANAVVDADNEAGIQIIETLGNED 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E + + + +E+ ++ S +G + + E Sbjct: 241 E----NDDVSKKDEEEEAIVFSTDEGADFSKFEE 270 >gi|322377929|ref|ZP_08052417.1| ribosomal protein S2 [Streptococcus sp. M334] gi|321281105|gb|EFX58117.1| ribosomal protein S2 [Streptococcus sp. M334] Length = 259 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFVAS 240 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 241 ETQADSIEEI 250 >gi|209574092|sp|A7N1X7|RS2_VIBHB RecName: Full=30S ribosomal protein S2 Length = 242 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+D E Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G + + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEGRNKDVAVVAEKDGFVE 240 >gi|269966251|ref|ZP_06180340.1| 30S ribosomal protein S2 [Vibrio alginolyticus 40B] gi|269829166|gb|EEZ83411.1| 30S ribosomal protein S2 [Vibrio alginolyticus 40B] Length = 253 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 12 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 72 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELETQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 132 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDYVIPGNDD+ R++ L+ + ASA +G + + + Sbjct: 192 IPVYAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEGRNKDVAAVAEKDGFVE 251 >gi|170727620|ref|YP_001761646.1| 30S ribosomal protein S2 [Shewanella woodyi ATCC 51908] gi|238688708|sp|B1KNU3|RS2_SHEWM RecName: Full=30S ribosomal protein S2 gi|169812967|gb|ACA87551.1| ribosomal protein S2 [Shewanella woodyi ATCC 51908] Length = 242 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 163/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + E+A QY V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS+PD ++Y++PGNDD+ RSI L+ + VA+AA G + + Sbjct: 181 IPVVAVVDTNSSPDGINYIVPGNDDAMRSIRLYTESVAAAAKAGRGQDLAVQAEQDGFVE 240 >gi|305680992|ref|ZP_07403799.1| ribosomal protein S2 [Corynebacterium matruchotii ATCC 14266] gi|305659197|gb|EFM48697.1| ribosomal protein S2 [Corynebacterium matruchotii ATCC 14266] Length = 296 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 110/270 (40%), Positives = 171/270 (63%), Gaps = 6/270 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL+SGV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDSGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDEAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG IL+V TK QA + + E AKR VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTILYVGTKKQAQEPIQEEAKRIGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+R KL+R L GI +M +P ++VVDTN+E +A+ EA +L Sbjct: 121 ESEGGFEGRTKKEILMLTRERTKLERVLGGIAEMHKVPSALWVVDTNKEHIAVNEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT---- 237 IP+VA++DTN +PD+V+Y +PGNDD+ RSIA+ ++++A I+G + A Sbjct: 181 IPVVAILDTNCDPDVVNYPVPGNDDAIRSIAVLTRVISAAVIEGKKAREERALAAAKDAA 240 Query: 238 -KSAGETVVHSKEGMQLEEDSQSSESSVLD 266 S E V ++ + + + + Sbjct: 241 GDSQREEAVEVAAKVEAPTEVAAKVEAPAE 270 >gi|225021112|ref|ZP_03710304.1| hypothetical protein CORMATOL_01124 [Corynebacterium matruchotii ATCC 33806] gi|224946112|gb|EEG27321.1| hypothetical protein CORMATOL_01124 [Corynebacterium matruchotii ATCC 33806] Length = 296 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 110/270 (40%), Positives = 171/270 (63%), Gaps = 6/270 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL+SGV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDSGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDEAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG IL+V TK QA + + E AKR VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTILYVGTKKQAQEPIQEEAKRIGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G TKKE L + R+R KL+R L GI +M +P ++VVDTN+E +A+ EA +L Sbjct: 121 ESEGGFEGRTKKEILMLTRERTKLERVLGGIAEMHKVPSALWVVDTNKEHIAVNEAHKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT---- 237 IP+VA++DTN +PD+V+Y +PGNDD+ RSIA+ ++++A I+G + A Sbjct: 181 IPVVAILDTNCDPDVVNYPVPGNDDAIRSIAVLTRVISAAVIEGKKAREERALAAAKDAA 240 Query: 238 -KSAGETVVHSKEGMQLEEDSQSSESSVLD 266 S E V ++ + + + + Sbjct: 241 GDSQREEAVEVAAKVEAPTEVAAKVEAPAE 270 >gi|156975506|ref|YP_001446413.1| 30S ribosomal protein S2 [Vibrio harveyi ATCC BAA-1116] gi|156527100|gb|ABU72186.1| hypothetical protein VIBHAR_03237 [Vibrio harveyi ATCC BAA-1116] Length = 253 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 113/240 (47%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 12 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+D E Sbjct: 72 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 132 AQDGTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G + + + Sbjct: 192 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEGRNKDVAVVAEKDGFVE 251 >gi|218888008|ref|YP_002437329.1| 30S ribosomal protein S2 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226697637|sp|B8DSA6|RS2_DESVM RecName: Full=30S ribosomal protein S2 gi|218758962|gb|ACL09861.1| ribosomal protein S2 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 271 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 106/238 (44%), Positives = 157/238 (65%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV + + A + DT Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLFRTAHDKVVDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG+++F+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +SI +L+ LE + Sbjct: 61 VVNGGKVVFIGTKRQAQEAVAVEAGRAGQFYVTNRWMGGTLTNFTTIQKSIDRLKKLEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L ++R+ DKL L GI++M LP L F+VD +RE +A++E R+L Sbjct: 121 FADGTVNKYQKKEILRMQREMDKLLATLGGIKEMDRLPQLAFIVDPHREDIAVKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPIVAV DTN +PDL+D+VIPGNDD+ R+I LF +A A ++G A + G D + Sbjct: 181 IPIVAVTDTNCDPDLIDFVIPGNDDAIRAIKLFVAAIADACLEGDAMRKERKGKDAEE 238 >gi|206603567|gb|EDZ40047.1| Ribosomal protein S2 [Leptospirillum sp. Group II '5-way CG'] Length = 274 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 102/256 (39%), Positives = 155/256 (60%), Gaps = 2/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++++LE+GV FGH+ WNPKM+R+I+ ERN +I+DL QTV + A + Sbjct: 16 MIDVTLKEMLEAGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQTVRRFRVAREFAKSV 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA + + A+R Y V +WLGGM+TN +TV +S+++L +EE+ Sbjct: 76 VRNRGSILFVGTKRQAQPIIQQEAQRCGMYFVTERWLGGMLTNLQTVRKSVERLNKIEEM 135 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE +E++ +KL L+GIR + LP +FV+D +E +A+ EA RL Sbjct: 136 MESGQISRLPKKEVAQLEKEHEKLASILNGIRGLSHLPAAIFVIDPKKEHIAVHEANRLG 195 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +PD++ + IP NDD+ RSI L +A A +DG G +T Sbjct: 196 IPVIAMVDTNCDPDMIQFPIPSNDDAIRSIRLITAGIADAVLDGALESQVQKGHET-PVS 254 Query: 242 ETVVHSKEGMQLEEDS 257 E+ +KE E+ S Sbjct: 255 ESFSETKEEEDSEKKS 270 >gi|224540953|ref|ZP_03681492.1| hypothetical protein CATMIT_00104 [Catenibacterium mitsuokai DSM 15897] gi|224526104|gb|EEF95209.1| hypothetical protein CATMIT_00104 [Catenibacterium mitsuokai DSM 15897] Length = 279 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 102/275 (37%), Positives = 161/275 (58%), Gaps = 2/275 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ L +A Q + + Sbjct: 1 MPVISMKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLKKSSDKLDEAYQAMKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA + V A+RS Y VNS+WLGG +TN+KT+ + I++L +LE++ Sbjct: 61 AEKGGKVLFVGTKKQAQEAVQTEAERSGSYFVNSRWLGGTLTNFKTIQKRIKRLIELEKM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +TKKE + + +++ KL+R L GI++M LP+ +FVVD E A+ EA+ L Sbjct: 121 EEDGSLEQYTKKEAVLLMKEKAKLERNLGGIKEMKKLPNALFVVDPKVEHNAVAEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTN +PD VD+VIP NDD+ R++ L +A A + + + Sbjct: 181 IPVFGIVDTNCDPDEVDHVIPANDDAIRAVKLIVAAMADAICEAKGEPTTVAFVKDEEEK 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 E ++ +EE+ + +G P Sbjct: 241 EVTMN-DAVASVEENKNNRGPRYKNGPRRNKAPRT 274 >gi|124112118|ref|YP_001019101.1| ribosomal protein S2 [Chlorokybus atmophyticus] gi|209573730|sp|Q19VA1|RR2_CHLAT RecName: Full=30S ribosomal protein S2, chloroplastic gi|124012225|gb|ABD62250.2| ribosomal protein S2 [Chlorokybus atmophyticus] Length = 228 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 94/225 (41%), Positives = 140/225 (62%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+GV FGH+ WNPKM YI+ ERN H+IDL QT +L +A + + Sbjct: 1 MRSVTLEEMMEAGVHFGHQTRGWNPKMAPYIYGERNGIHLIDLIQTARLLSEASDFVLNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G LF+ TK+QA+D + A R + VN +WLGGM+TNW T+ I++L+DLE+ Sbjct: 61 AKEGKEFLFIGTKNQAADIISSEALRCRSHFVNQRWLGGMLTNWPTIKTRIKRLKDLEQS 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE ++R+ DKL++ L G++DM LPD++ +VD RE A++E +L Sbjct: 121 EKNGTLDNLPKKESAVLKRQLDKLRKYLGGLQDMKTLPDVVIIVDQKREMNAVRECIKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPI+A++DTN +P L D IP NDD+ RS+ L +A A +G Sbjct: 181 IPIIALLDTNCDPSLSDLPIPANDDAIRSVNLIISKLADAIYEGQ 225 >gi|168491747|ref|ZP_02715890.1| ribosomal protein S2 [Streptococcus pneumoniae CDC0288-04] gi|183574052|gb|EDT94580.1| ribosomal protein S2 [Streptococcus pneumoniae CDC0288-04] Length = 259 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 105/250 (42%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTNS+PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNSDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 241 ETQADSIEEI 250 >gi|160880812|ref|YP_001559780.1| ribosomal protein S2 [Clostridium phytofermentans ISDg] gi|189044933|sp|A9KNC4|RS2_CLOPH RecName: Full=30S ribosomal protein S2 gi|160429478|gb|ABX43041.1| ribosomal protein S2 [Clostridium phytofermentans ISDg] Length = 246 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 99/249 (39%), Positives = 155/249 (62%), Gaps = 4/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A I D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYYAIKDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG++LFV TK QA D V A+R Y VN +WLGGM+TN+KT+ I++L+++E + Sbjct: 61 VANGGKVLFVGTKKQAQDSVKSEAERCGMYYVNERWLGGMLTNFKTIQSRIKRLKEIETM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE + ++++ +KL++ L GI+DM +P+ +FVVD +E++ IQEA L Sbjct: 121 ANDGTFEVLPKKEVIELKKEWEKLEKNLGGIKDMKEVPEAIFVVDPKKERICIQEAHNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 + ++ + DTN +P+ +D+VIPGNDD+ R++ L +A A I+ D+ Sbjct: 181 VKLIGIADTNCDPEELDHVIPGNDDAIRAVKLIVAKMADAVIEA---NQGVQLTDSTDVA 237 Query: 242 ETVVHSKEG 250 E + E Sbjct: 238 EEATETVEA 246 >gi|91792911|ref|YP_562562.1| 30S ribosomal protein S2 [Shewanella denitrificans OS217] gi|123166215|sp|Q12NY7|RS2_SHEDO RecName: Full=30S ribosomal protein S2 gi|91714913|gb|ABE54839.1| SSU ribosomal protein S2P [Shewanella denitrificans OS217] Length = 242 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVTMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + + E+A QY V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASKKGKVLFVGTKRAAGEAIKESALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANSGRGQDLAVQAEQDGFVE 240 >gi|312864417|ref|ZP_07724650.1| ribosomal protein S2 [Streptococcus downei F0415] gi|311100138|gb|EFQ58349.1| ribosomal protein S2 [Streptococcus downei F0415] Length = 257 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 101/254 (39%), Positives = 165/254 (64%), Gaps = 6/254 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ + E A R+ Q+ +N +WLGG +TNW T+ + I++L++++++ Sbjct: 61 AANDAVILFVGTKKQAAEAIAEEATRAGQFYINHRWLGGTLTNWDTIQKRIRRLKEIKQM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EADGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITSKLADAIIEGKQGEDKAVEEELAEAA 240 Query: 242 -----ETVVHSKEG 250 E +V EG Sbjct: 241 STESLEELVEVVEG 254 >gi|148239665|ref|YP_001225052.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7803] gi|166226764|sp|A5GLE0|RS2_SYNPW RecName: Full=30S ribosomal protein S2 gi|147848204|emb|CAK23755.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7803] Length = 239 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVAQEALRCGGSYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 EASGAIAMRPKKEGAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGSNEQRGGD 235 >gi|145295929|ref|YP_001138750.1| 30S ribosomal protein S2 [Corynebacterium glutamicum R] gi|166225266|sp|A4QF32|RS2_CORGB RecName: Full=30S ribosomal protein S2 gi|140845849|dbj|BAF54848.1| hypothetical protein [Corynebacterium glutamicum R] Length = 264 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 102/232 (43%), Positives = 159/232 (68%), Gaps = 2/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDQAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTVLFVGTKKQAQEAVQVEADRVGMPYVNHRWLGGMLTNFQTVSKRLNRMKELQAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EN +G TK+E L + R+R KL+R L GI +M +P ++++DTN+E +A+ EA +L Sbjct: 121 DAAENGYEGRTKREVLMLTRERTKLERVLGGIAEMTRVPSALWIIDTNKEHIAVAEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+VA++DTN +PD+VD+ +PGNDD+ RS AL ++++A +G + Sbjct: 181 NIPVVAILDTNCDPDVVDFPVPGNDDAIRSTALLSRVISTAVEEGKKAREER 232 >gi|19553229|ref|NP_601231.1| 30S ribosomal protein S2 [Corynebacterium glutamicum ATCC 13032] gi|62390865|ref|YP_226267.1| 30S ribosomal protein S2 [Corynebacterium glutamicum ATCC 13032] gi|25009199|sp|Q8NP01|RS2_CORGL RecName: Full=30S ribosomal protein S2 gi|21324796|dbj|BAB99419.1| Ribosomal protein S2 [Corynebacterium glutamicum ATCC 13032] gi|41326204|emb|CAF20366.1| 30S RIBOSOMAL PROTEIN S2 [Corynebacterium glutamicum ATCC 13032] Length = 272 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 102/232 (43%), Positives = 159/232 (68%), Gaps = 2/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF ERN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDQAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + V A R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTVLFVGTKKQAQEAVQVEADRVGMPYVNHRWLGGMLTNFQTVSKRLNRMKELQAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EN +G TK+E L + R+R KL+R L GI +M +P ++++DTN+E +A+ EA +L Sbjct: 121 DAAENGYEGRTKREVLMLTRERTKLERVLGGIAEMTRVPSALWIIDTNKEHIAVAEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+VA++DTN +PD+VD+ +PGNDD+ RS AL ++++A +G + Sbjct: 181 NIPVVAILDTNCDPDVVDFPVPGNDDAIRSTALLSRVISTAVEEGKKAREER 232 >gi|257458511|ref|ZP_05623648.1| ribosomal protein S2 [Treponema vincentii ATCC 35580] gi|257444108|gb|EEV19214.1| ribosomal protein S2 [Treponema vincentii ATCC 35580] Length = 294 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 107/277 (38%), Positives = 172/277 (62%), Gaps = 8/277 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + T Sbjct: 1 MAVVTMKNLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDAVRKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK Q + + A+R + VN++WLGGM+TN+ T+ +S+ +L+ +E++ Sbjct: 61 TAAGKSVLFVGTKKQVQQTIAKEAERCGMFYVNNRWLGGMLTNFSTIKKSLARLKKIEKM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N TKKE +++++ KL++ L GI++M LP ++F++DT +E +AI EARR+ Sbjct: 121 ENDGTFDSLTKKEVAVLQKEKAKLEKNLGGIKEMKELPGIIFIIDTRKETIAISEARRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAVVDTN NP+ +DY IPGNDD+ RSI+LF ++A+A I+ + + + Sbjct: 181 IPIVAVVDTNCNPEGIDYPIPGNDDAIRSISLFTQIIANAVIEADNESGLKIIENLQDGD 240 Query: 242 E-------TVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 E +E ++ + S + S + +E A Sbjct: 241 EGFNDSGIDPYQDREDEEITDYSNYTPSEKNEAEEEA 277 >gi|227872261|ref|ZP_03990620.1| ribosomal protein S2 [Oribacterium sinus F0268] gi|227841873|gb|EEJ52144.1| ribosomal protein S2 [Oribacterium sinus F0268] Length = 247 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 102/247 (41%), Positives = 150/247 (60%), Gaps = 1/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL +TV ++ + +S Sbjct: 1 MSAIGMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKTVKLVDDSYNALSQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA D V A R ++ VN +WLGGM+TN+KT+ IQ+L+D+E++ Sbjct: 61 VANGGTILFVGTKKQAQDAVKAEALRCGEFYVNERWLGGMLTNFKTIRSRIQRLKDIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++++ KL+ L GI+DM +PD +FV+D +EK+ +QEA L Sbjct: 121 AEDGTFDVLPKKEVTLLKKEWAKLEANLGGIKDMKSIPDAIFVIDPKKEKICVQEAHSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 I + + DTN++P+ +DY+IPGNDD+ R+I L +A A I+ + A S+ Sbjct: 181 ITLFGIADTNADPEELDYIIPGNDDAIRAIKLIVAKMADAVIEAKQGDMTEEEAALASSE 240 Query: 242 ETVVHSK 248 E Sbjct: 241 EDFTQEA 247 >gi|296875635|ref|ZP_06899705.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 15912] gi|296433365|gb|EFH19142.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 15912] Length = 260 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 162/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDSVATVEAELAA 240 Query: 242 --------ETVVHSKEG 250 E +V EG Sbjct: 241 TEGQADSIEEIVEVVEG 257 >gi|239908429|ref|YP_002955171.1| 30S ribosomal protein S2 [Desulfovibrio magneticus RS-1] gi|259495051|sp|C4XMY2|RS2_DESMR RecName: Full=30S ribosomal protein S2 gi|239798296|dbj|BAH77285.1| 30S ribosomal protein S2 [Desulfovibrio magneticus RS-1] Length = 258 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 167/261 (63%), Gaps = 7/261 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM +IF RN HIIDL QTV + QKA IS+ Sbjct: 1 MPYVTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR++FV TK QA + V + A+R Q+ V ++W+GGM+TN++T+ +SI +++ LE + Sbjct: 61 VAGGGRVIFVGTKRQAQESVKKEAERVGQFSVTNRWMGGMLTNFQTIKKSIDRMKTLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE + + R+ KL L GI+ M LP F++D RE++A+QE R+L Sbjct: 121 FEDGSIKRFPKKEIVMMGREVAKLNDNLGGIKHMDRLPQAAFIIDPKREEIAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAVVDTN +PD++DYVIPGNDD+ R+I LF +A A ++G A+ K Sbjct: 181 IPIVAVVDTNCDPDVIDYVIPGNDDAIRAIKLFAASIAEACMEGAAQNKDVEPVADKD-- 238 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 E ++E ++E+ Sbjct: 239 ----EKPEAAPVDEAETATET 255 >gi|296284724|ref|ZP_06862722.1| 30S ribosomal protein S2 [Citromicrobium bathyomarinum JL354] Length = 247 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 118/222 (53%), Positives = 166/222 (74%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P T++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP++ +AL ++ Sbjct: 1 MAAPTVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVA 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 T G++LFV TK QA + V EAA+ S Q+ VN +WLGGM+TNWKT+S SI++L+ LE Sbjct: 61 ATAQAKGKVLFVGTKRQAQEPVAEAARMSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L+ + G TKKE LN+ R+RDKL+ +L GIRDMGG+PD+M V+D N+E LAI+EA L Sbjct: 121 EQLSGDTSGLTKKEVLNLTRERDKLELSLGGIRDMGGIPDVMIVIDANKEDLAIKEANVL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP++AV+D+N++P + + +PGNDD++R++ L+CD AA Sbjct: 181 GIPVIAVLDSNTDPTGIAFPVPGNDDAARAVRLYCDAFGEAA 222 >gi|320108210|ref|YP_004183800.1| 30S ribosomal protein S2 [Terriglobus saanensis SP1PR4] gi|319926731|gb|ADV83806.1| ribosomal protein S2 [Terriglobus saanensis SP1PR4] Length = 308 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 119/297 (40%), Positives = 175/297 (58%), Gaps = 21/297 (7%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ YIF ERN +IIDL +T+ M ++A + ++D Sbjct: 1 MASITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVTDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA D + E A R+ +NS+WLGG++TNW TV +S+++L++L+E+ Sbjct: 61 TSSGKLILFVGTKRQAQDAIAEEATRAGMPYINSRWLGGLLTNWVTVQKSVKRLQELDEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE + +ER+R L L GI+ M LPD +FVVD+N E +A+ EAR+L Sbjct: 121 STDGRYELLTKKEVIKLERERKSLATNLSGIKAMRRLPDAIFVVDSNNEAIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-- 239 IP+VAVVDTN +P +VDYVIPGNDD+ R+I LF +A +A +G+ A S Sbjct: 181 IPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTTKIADSAAEGVQMISDKAFAQETSDI 240 Query: 240 ------------------AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 A S EE++ E+++ G A E + Sbjct: 241 MPVMTEAHFLGEEAEAAPAATPFAESTPVAADEEETVDLEAALGGGIRKAPASETEA 297 >gi|238898429|ref|YP_002924110.1| 30S ribosomal subunit protein S2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495217|sp|C4K5W9|RS2_HAMD5 RecName: Full=30S ribosomal protein S2 gi|229466188|gb|ACQ67962.1| 30S ribosomal subunit protein S2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 241 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R++LE+GV FGH+ WNPKM+ ++F RN HII+L TV ML AL + Sbjct: 1 MVAISMREMLEAGVHFGHKTRYWNPKMKPFVFGSRNGIHIINLEFTVTMLNNALSELRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 AR G+ILFV TK AS+ + EAA AQ+ V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SARKGKILFVGTKRAASEAIKEAAGNCAQFFVHHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI++MGGLPD +FV+D N E +A++EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRELNKLENSLGGIKNMGGLPDALFVIDANHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+ ++VDTNS+PD +D++IPGNDD+ RSI L+ + V++A +G + Sbjct: 181 IPVFSIVDTNSDPDGIDFIIPGNDDAIRSIKLYLNAVSAAISEGRSE 227 >gi|320352942|ref|YP_004194281.1| 30S ribosomal protein S2P [Desulfobulbus propionicus DSM 2032] gi|320121444|gb|ADW16990.1| SSU ribosomal protein S2P [Desulfobulbus propionicus DSM 2032] Length = 258 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 96/235 (40%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+G+ FGH+ WNPKM+ YI+ RN +I++L T+ + +KA + + Sbjct: 1 MAAVTMRQMLEAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDITMKLFKKAYGAMVEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG +LFV TK Q + E A+R Y +N +WLGGM+TN++T+ S+ +L+ +E + Sbjct: 61 VTNGGSVLFVCTKRQGQAIIKEEAERCGMYYINHRWLGGMLTNFQTIKHSVDRLKKIESM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F KKE L +E++R KL R + GI++M LPD++FV+D +E +A+ EA +L Sbjct: 121 QADGTINRFPKKEVLQMEKERVKLDRNIGGIKNMRTLPDVLFVIDPKKEDIAVGEAVKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++A+ DTN +PD ++YVIPGNDD+ R+I L ++A A ++G +R+ A+ Sbjct: 181 IPVIALTDTNCDPDGINYVIPGNDDAIRAIKLISSMMAEAIMEGKSRRGEEAEAN 235 >gi|283954740|ref|ZP_06372256.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 414] gi|283793580|gb|EFC32333.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 414] Length = 248 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 111/244 (45%), Positives = 154/244 (63%), Gaps = 1/244 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + A + E Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALSNEEKEIT 241 Query: 245 VHSK 248 K Sbjct: 242 DEEK 245 >gi|307711196|ref|ZP_07647618.1| ribosomal protein S2 [Streptococcus mitis SK321] gi|307617158|gb|EFN96336.1| ribosomal protein S2 [Streptococcus mitis SK321] Length = 259 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 159/250 (63%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFVAS 240 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 241 EAQADSIEEI 250 >gi|160895221|ref|ZP_02075993.1| hypothetical protein CLOL250_02781 [Clostridium sp. L2-50] gi|156863100|gb|EDO56531.1| hypothetical protein CLOL250_02781 [Clostridium sp. L2-50] Length = 250 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 99/231 (42%), Positives = 147/231 (63%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YI+ ERN +IIDL ++V M+ A I D Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMKPYIYTERNGIYIIDLQKSVGMVDDAYNAIGDC 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG+ILFV TK QA D + A+R Y VN +WLGGM+TN+ T+ I L+ E + Sbjct: 66 VANGGKILFVGTKKQAQDSIKSEAERCGMYYVNERWLGGMLTNFSTIQTRIATLKKYEAM 125 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ +KL++ L GI++M +PD++FVVD +E++ IQEA L Sbjct: 126 EADGTFDVLPKKEVIQIKKEMEKLQKNLGGIKEMKEIPDMIFVVDPKKERICIQEAHSLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 I +V + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ + Sbjct: 186 IKLVGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAQQGADAT 236 >gi|162139865|ref|YP_411356.2| 30S ribosomal protein S2 [Nitrosospira multiformis ATCC 25196] gi|209573698|sp|Q2YBA7|RS2_NITMU RecName: Full=30S ribosomal protein S2 Length = 248 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 114/243 (46%), Positives = 158/243 (65%), Gaps = 2/243 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ W+PKM YIF RN HII+L +T+ M Q+A+ + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK QA D V E A R V+ +WLGGM+TN+KT+ QS+++L D+E ++ Sbjct: 62 NKGTILFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMME 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L+++R+ +KL R+L GI+DM LPD MFV+D +K AI EAR+L IP Sbjct: 122 DGTLDKLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGE 242 IV +VD+N +P VDYVIPGNDDSS++I L+ VA A ++G + + D + A E Sbjct: 182 IVGIVDSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGRNQAIQEIVQGDFEEADE 241 Query: 243 TVV 245 V Sbjct: 242 AVA 244 >gi|68171644|ref|ZP_00545009.1| Ribosomal protein S2, bacterial and organelle form [Ehrlichia chaffeensis str. Sapulpa] gi|88657981|ref|YP_507329.1| 30S ribosomal protein S2 [Ehrlichia chaffeensis str. Arkansas] gi|123750068|sp|Q2GGV4|RS2_EHRCR RecName: Full=30S ribosomal protein S2 gi|67998937|gb|EAM85623.1| Ribosomal protein S2, bacterial and organelle form [Ehrlichia chaffeensis str. Sapulpa] gi|88599438|gb|ABD44907.1| ribosomal protein S2 [Ehrlichia chaffeensis str. Arkansas] Length = 288 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 119/249 (47%), Positives = 172/249 (69%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP+FT+R L+ESGV FGH+ WNPKM YI+ N+ HII+L TV +L+ AL+ + D Sbjct: 4 LPKFTMRDLVESGVHFGHKASRWNPKMAPYIYGVHNDIHIINLQNTVVLLKNALKALYDI 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + GR+LF+ TK QAS + + A R QY +N++WLGGM+TNW+T+S SI+KL++ E+L Sbjct: 64 VLKRGRVLFIGTKVQASAIIADEAVRCGQYYINNRWLGGMLTNWETISLSIKKLKEYEKL 123 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + FTKKE L E+KR KL R++ GI +MGGLP +FV+DTN+E +AI+EA +L I Sbjct: 124 IENVDNQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHALFVIDTNKEHIAIKEANKLNI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++AV+DTNS+P +DY IPGNDD+ RSI FC +V+ ++ I + G + + Sbjct: 184 PVIAVLDTNSDPAGIDYPIPGNDDAVRSIDFFCKIVSDTILEAIRSDLAKSGINVDGIKD 243 Query: 243 TVVHSKEGM 251 V +E + Sbjct: 244 FSVEKREDL 252 >gi|116669928|ref|YP_830861.1| 30S ribosomal protein S2 [Arthrobacter sp. FB24] gi|166225237|sp|A0JUP1|RS2_ARTS2 RecName: Full=30S ribosomal protein S2 gi|116610037|gb|ABK02761.1| SSU ribosomal protein S2P [Arthrobacter sp. FB24] Length = 294 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 111/251 (44%), Positives = 169/251 (67%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TVS+ IQ++++LEE+ Sbjct: 61 VAHGGTVLFVGTKKQAQESIAEQATRVGQPYVNQRWLGGMLTNFQTVSKRIQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+ KL+ L GIR++ P ++++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSAYTKKELLLLRRELTKLETNLGGIRNLTKAPSVLWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L +VA A +G+ ++ T++ Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVVADAVAEGLIARNQRATGTTEAP 240 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 241 EEPLAEWEREL 251 >gi|157376293|ref|YP_001474893.1| 30S ribosomal protein S2 [Shewanella sediminis HAW-EB3] gi|189044994|sp|A8FY42|RS2_SHESH RecName: Full=30S ribosomal protein S2 gi|157318667|gb|ABV37765.1| ribosomal protein S2 [Shewanella sediminis HAW-EB3] Length = 242 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + E+A Q+ V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKESAISCEQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS+PD ++Y++PGNDD+ RSI L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSSPDGINYIVPGNDDAMRSIRLYTQSVAAAAKAGRGQDLAVQAEQDGFVE 240 >gi|120555459|ref|YP_959810.1| 30S ribosomal protein S2 [Marinobacter aquaeolei VT8] gi|166225283|sp|A1U3Q4|RS2_MARAV RecName: Full=30S ribosomal protein S2 gi|120325308|gb|ABM19623.1| SSU ribosomal protein S2P [Marinobacter aquaeolei VT8] Length = 250 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 116/236 (49%), Positives = 158/236 (66%), Gaps = 3/236 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM ++IF RN HII+L QTVP + +AL I Sbjct: 1 MAQVNMRDLLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNEALNFIQSL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK AS + E A+RS Q VN +WLGGM+TN+KT+ QSI++ RDLE Sbjct: 61 AENKNKILFVGTKRAASKIIKEEAQRSGQPYVNHRWLGGMLTNYKTIRQSIRRYRDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+R++ GI+DMGGLPD +FV+D + E++AI+EA +L Sbjct: 121 SQDGTFDKLTKKEALERTREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP++ VVDTNS+PD VDYVIPGNDD+ R+I ++ VA ++ A Q + GAD Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIQIYVKAVADTCLE--ASQSAGAGADE 234 >gi|15642258|ref|NP_231891.1| 30S ribosomal protein S2 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121729757|ref|ZP_01682196.1| ribosomal protein S2 [Vibrio cholerae V52] gi|147673418|ref|YP_001217775.1| 30S ribosomal protein S2 [Vibrio cholerae O395] gi|153217369|ref|ZP_01951120.1| ribosomal protein S2 [Vibrio cholerae 1587] gi|153803016|ref|ZP_01957602.1| ribosomal protein S2 [Vibrio cholerae MZO-3] gi|153823642|ref|ZP_01976309.1| ribosomal protein S2 [Vibrio cholerae B33] gi|153827572|ref|ZP_01980239.1| ribosomal protein S2 [Vibrio cholerae MZO-2] gi|153828232|ref|ZP_01980899.1| ribosomal protein S2 [Vibrio cholerae 623-39] gi|227082384|ref|YP_002810935.1| ribosomal protein S2 [Vibrio cholerae M66-2] gi|254286068|ref|ZP_04961029.1| ribosomal protein S2 [Vibrio cholerae AM-19226] gi|255747044|ref|ZP_05420989.1| SSU ribosomal protein S2p (SAe) [Vibrio cholera CIRS 101] gi|262161412|ref|ZP_06030522.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae INDRE 91/1] gi|262168261|ref|ZP_06035958.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC27] gi|25009223|sp|Q9KPV2|RS2_VIBCH RecName: Full=30S ribosomal protein S2 gi|172047607|sp|A5F607|RS2_VIBC3 RecName: Full=30S ribosomal protein S2 gi|254764499|sp|C3LQ32|RS2_VIBCM RecName: Full=30S ribosomal protein S2 gi|9656822|gb|AAF95404.1| ribosomal protein S2 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628508|gb|EAX60994.1| ribosomal protein S2 [Vibrio cholerae V52] gi|124113615|gb|EAY32435.1| ribosomal protein S2 [Vibrio cholerae 1587] gi|124121459|gb|EAY40202.1| ribosomal protein S2 [Vibrio cholerae MZO-3] gi|126518837|gb|EAZ76060.1| ribosomal protein S2 [Vibrio cholerae B33] gi|146315301|gb|ABQ19840.1| ribosomal protein S2 [Vibrio cholerae O395] gi|148876321|gb|EDL74456.1| ribosomal protein S2 [Vibrio cholerae 623-39] gi|149737952|gb|EDM52857.1| ribosomal protein S2 [Vibrio cholerae MZO-2] gi|150423978|gb|EDN15918.1| ribosomal protein S2 [Vibrio cholerae AM-19226] gi|227010272|gb|ACP06484.1| ribosomal protein S2 [Vibrio cholerae M66-2] gi|227014156|gb|ACP10366.1| ribosomal protein S2 [Vibrio cholerae O395] gi|255735446|gb|EET90846.1| SSU ribosomal protein S2p (SAe) [Vibrio cholera CIRS 101] gi|262023153|gb|EEY41857.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC27] gi|262028723|gb|EEY47377.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae INDRE 91/1] Length = 242 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 1 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A A +G + + + Sbjct: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKDVAAVAEKDGFVE 240 >gi|315616348|gb|EFU96966.1| ribosomal protein S2 [Escherichia coli 3431] Length = 233 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 111/233 (47%), Positives = 158/233 (67%), Gaps = 1/233 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G+IL Sbjct: 1 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQG 129 FV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VD Sbjct: 121 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 TNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++ E Sbjct: 181 TNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 233 >gi|254525018|ref|ZP_05137073.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14] gi|219722609|gb|EED41134.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14] Length = 268 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 105/234 (44%), Positives = 151/234 (64%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 + G +LF+ TK A + + E A+R +N +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAG 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPHAASV 234 >gi|187928367|ref|YP_001898854.1| 30S ribosomal protein S2 [Ralstonia pickettii 12J] gi|238691812|sp|B2UB06|RS2_RALPJ RecName: Full=30S ribosomal protein S2 gi|187725257|gb|ACD26422.1| ribosomal protein S2 [Ralstonia pickettii 12J] Length = 247 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 113/247 (45%), Positives = 163/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM Q AL+ + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYQDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDMEVAKE 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ DKL +++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGATETMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + G+ Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGGDD 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|56478851|ref|YP_160440.1| 30S ribosomal protein S2 [Aromatoleum aromaticum EbN1] gi|61215383|sp|Q5NZH5|RS2_AZOSE RecName: Full=30S ribosomal protein S2 gi|56314894|emb|CAI09539.1| 30S ribosomal protein S2 [Aromatoleum aromaticum EbN1] Length = 251 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 113/251 (45%), Positives = 165/251 (65%), Gaps = 4/251 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNP+M YIF +RN HI++L +T+ +A+ + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMGKYNEAMNYVRKLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G IL V TK QA + V E A R+ V+ +WLGGM+TN+KTV QSI++L+++E ++ Sbjct: 63 RGTILLVGTKRQAREIVSEEASRAGMPFVDERWLGGMLTNFKTVKQSIKRLKEMEAMVED 122 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + +KKE L R+ DKLK+++ GI+DMGGLPD MFV+D K+AI EA++L IPI Sbjct: 123 GSIERLSKKEALMATREMDKLKKSIGGIKDMGGLPDAMFVIDVGYHKIAITEAQKLGIPI 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VAVVDTN +P+ +DYVIPGNDDSSR+I L+ VA A ++G ++ + + + Sbjct: 183 VAVVDTNHSPEGIDYVIPGNDDSSRAIRLYARGVADAVLEGRSQALQDV---VAAGSDEF 239 Query: 245 VHSKEGMQLEE 255 V +E E+ Sbjct: 240 VEVQEDGSDEQ 250 >gi|37521399|ref|NP_924776.1| 30S ribosomal protein S2 [Gloeobacter violaceus PCC 7421] gi|61215681|sp|Q7NJK2|RS2_GLOVI RecName: Full=30S ribosomal protein S2 gi|35212396|dbj|BAC89771.1| 30S ribosomal protein S2 [Gloeobacter violaceus PCC 7421] Length = 274 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 101/228 (44%), Positives = 145/228 (63%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ Q+LE+GV FGH+ WNPKM RYIF +RN HIIDL+QT +L +A + + Sbjct: 1 MSVVSLPQMLEAGVHFGHQTRRWNPKMRRYIFTDRNGIHIIDLTQTAHLLDEAYSYLREA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +ILFV TK QA+ + + AKR + VN +WLGGM+TNW T+ S+ +L++LE + Sbjct: 61 SDQGKKILFVGTKRQAAPVIAQEAKRCGMFWVNQRWLGGMLTNWDTIRTSVDQLKELETM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE +K ++L + L G+++M PD++ VVD RE+ A+ EARRL Sbjct: 121 EANGTLDLLPKKEASVTRKKLERLTKYLGGLKNMRRKPDILLVVDQRREQNAVMEARRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPIV+++DTN +PDL D IP NDD+ RSI L +A A +G Q Sbjct: 181 IPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLIVGKLADAIYEGRHGQ 228 >gi|312866884|ref|ZP_07727097.1| ribosomal protein S2 [Streptococcus parasanguinis F0405] gi|322390408|ref|ZP_08063929.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 903] gi|311097667|gb|EFQ55898.1| ribosomal protein S2 [Streptococcus parasanguinis F0405] gi|321142866|gb|EFX38323.1| 30S ribosomal protein S2 [Streptococcus parasanguinis ATCC 903] Length = 260 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 162/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA+D V E A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAADAVAEEAVRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + S + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDSVATVEAELAA 240 Query: 242 --------ETVVHSKEG 250 E +V EG Sbjct: 241 TEGQADSIEEIVEVVEG 257 >gi|190573503|ref|YP_001971348.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia K279a] gi|229559896|sp|B2FIA9|RS2_STRMK RecName: Full=30S ribosomal protein S2 gi|190011425|emb|CAQ45043.1| putative 30S ribosomal protein S2 [Stenotrophomonas maltophilia K279a] Length = 268 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 105/234 (44%), Positives = 151/234 (64%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 + G +LF+ TK A + + E A+R +N +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAG 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPHAASV 234 >gi|305431788|ref|ZP_07400955.1| 30S ribosomal protein S2 [Campylobacter coli JV20] gi|304444872|gb|EFM37518.1| 30S ribosomal protein S2 [Campylobacter coli JV20] Length = 248 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 112/254 (44%), Positives = 160/254 (62%), Gaps = 9/254 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEAL 233 Query: 245 VHSKEGMQLEEDSQ 258 ++ + EE + Sbjct: 234 PSEEKEITDEEKKK 247 >gi|212636277|ref|YP_002312802.1| 30S ribosomal protein S2 [Shewanella piezotolerans WP3] gi|226697647|sp|B8CQ85|RS2_SHEPW RecName: Full=30S ribosomal protein S2 gi|212557761|gb|ACJ30215.1| Ribosomal protein S2 [Shewanella piezotolerans WP3] Length = 242 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++M GLPD++FV+ + E +AI+EA L Sbjct: 121 SIDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS+PD ++Y+IPGNDD+ RSI L+ + VA+AA G + + Sbjct: 181 IPVVAVVDTNSSPDGINYIIPGNDDAMRSIRLYTESVATAAKAGRNQDLAVQAEQDGFVE 240 >gi|254252059|ref|ZP_04945377.1| ribosomal protein S2 [Burkholderia dolosa AUO158] gi|124894668|gb|EAY68548.1| ribosomal protein S2 [Burkholderia dolosa AUO158] Length = 318 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 162/242 (66%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 75 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAAN 134 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 135 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 194 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 195 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 254 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ +A A ++G A + + + E V Sbjct: 255 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGIADAILEGRANAVNEVVQAVRGDDEYV 314 Query: 245 VH 246 Sbjct: 315 EE 316 >gi|209573694|sp|A8F0I9|RS2_RICM5 RecName: Full=30S ribosomal protein S2 Length = 295 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 133/271 (49%), Positives = 185/271 (68%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GE---TVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 244 QEHTDKALTSKNVSKLKQAKKFSKTKNIDEE 274 >gi|53805191|ref|YP_113086.1| 30S ribosomal protein S2 [Methylococcus capsulatus str. Bath] gi|61215446|sp|Q60BB0|RS2_METCA RecName: Full=30S ribosomal protein S2 gi|53758952|gb|AAU93243.1| ribosomal protein S2 [Methylococcus capsulatus str. Bath] Length = 256 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 106/252 (42%), Positives = 156/252 (61%), Gaps = 6/252 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM +IF R+N HII+L +T+P+ A++ + Sbjct: 1 MTSVTMRQMLEAGVHFGHQTRYWNPKMAPFIFGARSNIHIINLEKTLPLFNDAMKYLEQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G+ILFV TK + E A+R VN +WLGGM+TN+KT+ SI +++DL+ + Sbjct: 61 AANRGKILFVGTKKTMRKVIEEEARRCGMPYVNHRWLGGMLTNFKTIKASIARMKDLQAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F+KKE L + R+ +KL + GI DM LPD+MF++DT EK A+ EAR+L Sbjct: 121 RDDGRLNRFSKKEALGMMRELEKLVCNVGGIGDMDRLPDVMFIIDTGYEKNAVSEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTN++P +DYVIPGNDDS R++ L+ A+A + G A G D + Sbjct: 181 IPVVGVVDTNNSPVGIDYVIPGNDDSIRAVQLYAQSAATAILRGKA-----SGVDFGAVA 235 Query: 242 ETVVHSKEGMQL 253 + V + + Sbjct: 236 DEFVEMEPETEQ 247 >gi|323697433|ref|ZP_08109345.1| ribosomal protein S2 [Desulfovibrio sp. ND132] gi|323457365|gb|EGB13230.1| ribosomal protein S2 [Desulfovibrio desulfuricans ND132] Length = 263 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 112/231 (48%), Positives = 157/231 (67%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++Q+LE+GV FGH+ WNPKM YIF RN HI+DL QTV M A I DT Sbjct: 1 MAYVTMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKMFATAHDFIVDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG++LF+ TK QA + V A+RS Y V +W+GG +TN++T+ +SI +L+ LE++ Sbjct: 61 VAKGGKVLFIGTKRQAQESVKAEAERSGMYYVTHRWMGGTLTNFQTIKKSIDRLKSLEQM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +TKKE + + R+ KL AL GI+DM P +FV+D RE++AIQE R+L Sbjct: 121 FEDGSISRYTKKEAVGMNREVKKLNLALGGIKDMTEAPQAVFVIDPKREQIAIQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+VAVVD+N +PD+VDY+IPGNDD+ R+I LF +A A ++G A Q Y Sbjct: 181 IPVVAVVDSNCDPDMVDYIIPGNDDAIRAIKLFATHMADACLEGGAMQKDY 231 >gi|264679367|ref|YP_003279274.1| ribosomal protein S2 [Comamonas testosteroni CNB-2] gi|299532326|ref|ZP_07045719.1| 30S ribosomal protein S2 [Comamonas testosteroni S44] gi|262209880|gb|ACY33978.1| ribosomal protein S2 [Comamonas testosteroni CNB-2] gi|298719734|gb|EFI60698.1| 30S ribosomal protein S2 [Comamonas testosteroni S44] Length = 250 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 110/248 (44%), Positives = 162/248 (65%), Gaps = 1/248 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 3 VTMREMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG IL V TK QA + V E AKR+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 63 GGTILMVGTKRQARELVAEEAKRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEA 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE+L R+ +KL++ + GI+DM GLPD +FV+D K+AI EA++L IP++ Sbjct: 123 GLESMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPLI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSAGETV 244 VVDTN NPD +DYVIPGNDDS++++ L+ +A A ++G AR + + A G+ Sbjct: 183 GVVDTNHNPDGIDYVIPGNDDSAKAVQLYAQGIADAILEGREARLNDVVKAAAGENGDEF 242 Query: 245 VHSKEGMQ 252 V +E Sbjct: 243 VEVEESAA 250 >gi|322392452|ref|ZP_08065912.1| 30S ribosomal protein S2 [Streptococcus peroris ATCC 700780] gi|321144444|gb|EFX39845.1| 30S ribosomal protein S2 [Streptococcus peroris ATCC 700780] Length = 275 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 17 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 76 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 77 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 136 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 137 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 197 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDATAVEAEFAAS 256 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 257 EAQADSIEEI 266 >gi|161524430|ref|YP_001579442.1| 30S ribosomal protein S2 [Burkholderia multivorans ATCC 17616] gi|160341859|gb|ABX14945.1| ribosomal protein S2 [Burkholderia multivorans ATCC 17616] Length = 309 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 66 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAAN 125 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 126 RGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEA 185 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 186 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 245 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A + + + E V Sbjct: 246 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRANAVNEVVQAVRGDDEYV 305 Query: 245 VH 246 Sbjct: 306 EE 307 >gi|26988323|ref|NP_743748.1| 30S ribosomal protein S2 [Pseudomonas putida KT2440] gi|148549392|ref|YP_001269494.1| 30S ribosomal protein S2 [Pseudomonas putida F1] gi|38258321|sp|Q88MI0|RS2_PSEPK RecName: Full=30S ribosomal protein S2 gi|166226742|sp|A5W850|RS2_PSEP1 RecName: Full=30S ribosomal protein S2 gi|24983071|gb|AAN67212.1|AE016348_4 ribosomal protein S2 [Pseudomonas putida KT2440] gi|148513450|gb|ABQ80310.1| SSU ribosomal protein S2P [Pseudomonas putida F1] gi|313500241|gb|ADR61607.1| RpsB [Pseudomonas putida BIRD-1] Length = 245 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HI++L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIVNLEKTLPMFNDALSFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKILFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRGR 225 >gi|229507666|ref|ZP_04397171.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae BX 330286] gi|229512139|ref|ZP_04401618.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae B33] gi|229513902|ref|ZP_04403364.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TMA 21] gi|229519274|ref|ZP_04408717.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC9] gi|229522206|ref|ZP_04411623.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TM 11079-80] gi|229524263|ref|ZP_04413668.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae bv. albensis VL426] gi|229528737|ref|ZP_04418127.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 12129(1)] gi|229607170|ref|YP_002877818.1| 30S ribosomal protein S2 [Vibrio cholerae MJ-1236] gi|254849390|ref|ZP_05238740.1| 30S ribosomal protein S2 [Vibrio cholerae MO10] gi|298500365|ref|ZP_07010170.1| SSU ribosomal protein S2 [Vibrio cholerae MAK 757] gi|229332511|gb|EEN97997.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 12129(1)] gi|229337844|gb|EEO02861.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae bv. albensis VL426] gi|229341131|gb|EEO06136.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TM 11079-80] gi|229343963|gb|EEO08938.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC9] gi|229349083|gb|EEO14040.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TMA 21] gi|229352104|gb|EEO17045.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae B33] gi|229355171|gb|EEO20092.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae BX 330286] gi|229369825|gb|ACQ60248.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae MJ-1236] gi|254845095|gb|EET23509.1| 30S ribosomal protein S2 [Vibrio cholerae MO10] gi|297541058|gb|EFH77112.1| SSU ribosomal protein S2 [Vibrio cholerae MAK 757] Length = 253 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 12 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE + Sbjct: 72 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 132 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A A +G + + + Sbjct: 192 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKDVAAVAEKDGFVE 251 >gi|148984518|ref|ZP_01817806.1| ribosomal protein S2 [Streptococcus pneumoniae SP3-BS71] gi|148988858|ref|ZP_01820273.1| ribosomal protein S2 [Streptococcus pneumoniae SP6-BS73] gi|148993633|ref|ZP_01823104.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP9-BS68] gi|148997983|ref|ZP_01825496.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP11-BS70] gi|149003081|ref|ZP_01827990.1| ribosomal protein S2 [Streptococcus pneumoniae SP14-BS69] gi|149007744|ref|ZP_01831353.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP18-BS74] gi|149020134|ref|ZP_01835108.1| ribosomal protein S2 [Streptococcus pneumoniae SP23-BS72] gi|168484331|ref|ZP_02709283.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1873-00] gi|168487193|ref|ZP_02711701.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1087-00] gi|168489289|ref|ZP_02713488.1| ribosomal protein S2 [Streptococcus pneumoniae SP195] gi|168494024|ref|ZP_02718167.1| ribosomal protein S2 [Streptococcus pneumoniae CDC3059-06] gi|168576087|ref|ZP_02721992.1| ribosomal protein S2 [Streptococcus pneumoniae MLV-016] gi|194398612|ref|YP_002038811.1| 30S ribosomal protein S2 [Streptococcus pneumoniae G54] gi|221232913|ref|YP_002512067.1| 30S ribosomal protein S2 [Streptococcus pneumoniae ATCC 700669] gi|225855708|ref|YP_002737220.1| 30S ribosomal protein S2 [Streptococcus pneumoniae JJA] gi|225857783|ref|YP_002739294.1| 30S ribosomal protein S2 [Streptococcus pneumoniae P1031] gi|225859986|ref|YP_002741496.1| 30S ribosomal protein S2 [Streptococcus pneumoniae 70585] gi|225862031|ref|YP_002743540.1| 30S ribosomal protein S2 [Streptococcus pneumoniae Taiwan19F-14] gi|237651028|ref|ZP_04525280.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CCRI 1974] gi|237821141|ref|ZP_04596986.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CCRI 1974M2] gi|298229441|ref|ZP_06963122.1| 30S ribosomal protein S2 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255965|ref|ZP_06979551.1| 30S ribosomal protein S2 [Streptococcus pneumoniae str. Canada MDR_19A] gi|307128478|ref|YP_003880509.1| 30S ribosomal protein S2 [Streptococcus pneumoniae 670-6B] gi|238690814|sp|B5E3W1|RS2_STRP4 RecName: Full=30S ribosomal protein S2 gi|254764492|sp|C1CBJ2|RS2_STRP7 RecName: Full=30S ribosomal protein S2 gi|254764493|sp|B8ZQA6|RS2_STRPJ RecName: Full=30S ribosomal protein S2 gi|254764495|sp|C1CHL4|RS2_STRZJ RecName: Full=30S ribosomal protein S2 gi|254764496|sp|C1CNI8|RS2_STRZP RecName: Full=30S ribosomal protein S2 gi|254764497|sp|C1CUD2|RS2_STRZT RecName: Full=30S ribosomal protein S2 gi|147755993|gb|EDK63036.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP11-BS70] gi|147758822|gb|EDK65818.1| ribosomal protein S2 [Streptococcus pneumoniae SP14-BS69] gi|147760739|gb|EDK67711.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP18-BS74] gi|147923295|gb|EDK74409.1| ribosomal protein S2 [Streptococcus pneumoniae SP3-BS71] gi|147925669|gb|EDK76745.1| ribosomal protein S2 [Streptococcus pneumoniae SP6-BS73] gi|147927854|gb|EDK78876.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP9-BS68] gi|147930812|gb|EDK81793.1| ribosomal protein S2 [Streptococcus pneumoniae SP23-BS72] gi|172042417|gb|EDT50463.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1873-00] gi|183569920|gb|EDT90448.1| ribosomal protein S2 [Streptococcus pneumoniae CDC1087-00] gi|183572311|gb|EDT92839.1| ribosomal protein S2 [Streptococcus pneumoniae SP195] gi|183575947|gb|EDT96475.1| ribosomal protein S2 [Streptococcus pneumoniae CDC3059-06] gi|183578085|gb|EDT98613.1| ribosomal protein S2 [Streptococcus pneumoniae MLV-016] gi|194358279|gb|ACF56727.1| 30S ribosomal protein S2 [Streptococcus pneumoniae G54] gi|220675375|emb|CAR69977.1| 30S ribosomal protein S2 [Streptococcus pneumoniae ATCC 700669] gi|225720931|gb|ACO16785.1| ribosomal protein S2 [Streptococcus pneumoniae 70585] gi|225723434|gb|ACO19287.1| ribosomal protein S2 [Streptococcus pneumoniae JJA] gi|225724645|gb|ACO20497.1| ribosomal protein S2 [Streptococcus pneumoniae P1031] gi|225727861|gb|ACO23712.1| ribosomal protein S2 [Streptococcus pneumoniae Taiwan19F-14] gi|301795124|emb|CBW37597.1| 30S ribosomal protein S2 [Streptococcus pneumoniae INV104] gi|301800947|emb|CBW33609.1| 30S ribosomal protein S2 [Streptococcus pneumoniae OXC141] gi|306485540|gb|ADM92409.1| ribosomal protein S2 [Streptococcus pneumoniae 670-6B] gi|327388959|gb|EGE87307.1| ribosomal protein S2 [Streptococcus pneumoniae GA04375] gi|332071293|gb|EGI81788.1| ribosomal protein S2 [Streptococcus pneumoniae GA17545] gi|332071484|gb|EGI81978.1| ribosomal protein S2 [Streptococcus pneumoniae GA41301] gi|332071657|gb|EGI82150.1| ribosomal protein S2 [Streptococcus pneumoniae GA17570] gi|332198628|gb|EGJ12711.1| ribosomal protein S2 [Streptococcus pneumoniae GA41317] gi|332198837|gb|EGJ12919.1| ribosomal protein S2 [Streptococcus pneumoniae GA47368] gi|332199036|gb|EGJ13117.1| ribosomal protein S2 [Streptococcus pneumoniae GA47901] Length = 259 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 241 ETQADSIEEI 250 >gi|283851253|ref|ZP_06368536.1| ribosomal protein S2 [Desulfovibrio sp. FW1012B] gi|283573422|gb|EFC21399.1| ribosomal protein S2 [Desulfovibrio sp. FW1012B] Length = 273 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 110/231 (47%), Positives = 162/231 (70%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGH+ WNPKM +IF RN HIIDL QTV + QKA ++D Sbjct: 1 MPYVTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDYVADI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR++FV TK QA + V + A+R+ Q+ V ++W+GGM+TN++T+ +SI +L++LE + Sbjct: 61 VAGGGRVIFVGTKRQAQESVKKEAERAGQFFVTNRWMGGMLTNFQTIKKSIDRLKNLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE + + R+ +KL L GI++M LP F++D RE++A+QE R+L Sbjct: 121 FEDGSIKKFPKKEIVMMGREVEKLNATLGGIKNMDRLPQAAFIIDPKREEIAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IPIVAVVDTN +PD++D+VIPGNDD+ R+I LF +A A ++G A+ Sbjct: 181 IPIVAVVDTNCDPDVIDHVIPGNDDAIRAIKLFATSIAEACLEGAAQNKDA 231 >gi|11465715|ref|NP_053859.1| ribosomal protein S2 [Porphyra purpurea] gi|1710703|sp|P51249|RR2_PORPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|1276715|gb|AAC08135.1| 30S ribosomal protein S2 [Porphyra purpurea] Length = 241 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 97/230 (42%), Positives = 142/230 (61%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +LLE+GV FGH+ WNPKM YI+ ERN HIIDL QT +L +A + + Sbjct: 1 MAIVTLAELLEAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTSQLLTEACEFVKQA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LF+ TK QA+ + + A+R Y VN +WLGGM+TNW T+ + +LR LEE Sbjct: 61 SSDGRKVLFLGTKRQAAGIIAQEAQRCDSYYVNQRWLGGMLTNWVTIKSRVTRLRQLEEQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ DKL++ L+GI++M LPD++ VVD RE AIQE +L Sbjct: 121 DSSGLIDQLPKKEAAVLRRELDKLRKHLNGIKNMTRLPDIVVVVDQKRETTAIQECLKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP + ++DTN +P++++ IP NDD+ RSI L +A A +G Q Sbjct: 181 IPTICILDTNCSPEIINIPIPANDDAIRSIKLIIGKIADAIYEGKYGQME 230 >gi|116074686|ref|ZP_01471947.1| 30S ribosomal protein S2 [Synechococcus sp. RS9916] gi|116067908|gb|EAU73661.1| 30S ribosomal protein S2 [Synechococcus sp. RS9916] Length = 239 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEAARCGGSYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGSNDQRGGD 235 >gi|308455398|ref|XP_003090239.1| hypothetical protein CRE_23789 [Caenorhabditis remanei] gi|308265124|gb|EFP09077.1| hypothetical protein CRE_23789 [Caenorhabditis remanei] Length = 288 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 112/247 (45%), Positives = 171/247 (69%), Gaps = 2/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TIRQLL+SGV FGH+ WNPKM+R+IF ER+ +IIDL Q++ + A + + +T Sbjct: 1 MAVVTIRQLLDSGVHFGHQTRRWNPKMKRFIFTERSGIYIIDLQQSLGYIDDAYEFVKNT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG ILFV TK QA + + E A R Q VN +WLGG++TN++TV++ ++++++LE+L Sbjct: 61 VARGGNILFVGTKKQAQEAIAEQAARVNQPYVNQRWLGGLLTNFQTVTKRLERMKELEQL 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 GFTKKE L +R+ +KL+++L GIR M P ++VVDT +E LAI EA++L Sbjct: 121 DFEGGTSGFTKKELLLKKRELEKLQKSLGGIRHMTKTPSALWVVDTKKEHLAIDEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD V + IPGNDD+ RS++L ++A AA +G+ +H A+ ++A Sbjct: 181 IPVIAILDTNCDPDEVTFPIPGNDDAIRSVSLLTRVIADAAAEGLMERH-QKPAEGETAA 239 Query: 242 ETVVHSK 248 E + + Sbjct: 240 EPLAEWE 246 >gi|83748807|ref|ZP_00945820.1| SSU ribosomal protein S2P [Ralstonia solanacearum UW551] gi|207723354|ref|YP_002253753.1| 30S ribosomal protein S2 [Ralstonia solanacearum MolK2] gi|207743244|ref|YP_002259636.1| 30s ribosomal protein s2 [Ralstonia solanacearum IPO1609] gi|300704231|ref|YP_003745834.1| 30S ribosomal protein S2 [Ralstonia solanacearum CFBP2957] gi|83724499|gb|EAP71664.1| SSU ribosomal protein S2P [Ralstonia solanacearum UW551] gi|206588553|emb|CAQ35516.1| 30s ribosomal protein s2 [Ralstonia solanacearum MolK2] gi|206594641|emb|CAQ61568.1| 30s ribosomal protein s2 [Ralstonia solanacearum IPO1609] gi|299071895|emb|CBJ43224.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum CFBP2957] Length = 247 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 111/247 (44%), Positives = 161/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKTSIKRLKDMETAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALDTMSKKEALMFEREMAKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + G+ Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGGDD 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|303254876|ref|ZP_07340961.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS455] gi|303259703|ref|ZP_07345679.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP-BS293] gi|303262170|ref|ZP_07348115.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP14-BS292] gi|303264605|ref|ZP_07350524.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS397] gi|303266086|ref|ZP_07351980.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS457] gi|303268494|ref|ZP_07354288.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS458] gi|209573684|sp|B2INN2|RS2_STRPS RecName: Full=30S ribosomal protein S2 gi|302598147|gb|EFL65208.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS455] gi|302636810|gb|EFL67300.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP14-BS292] gi|302639255|gb|EFL69714.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP-BS293] gi|302641995|gb|EFL72348.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS458] gi|302644390|gb|EFL74643.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS457] gi|302645975|gb|EFL76203.1| 30S ribosomal protein S2 [Streptococcus pneumoniae BS397] Length = 259 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRTRLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 241 ETQADSIEEI 250 >gi|15904061|ref|NP_359611.1| 30S ribosomal protein S2 [Streptococcus pneumoniae R6] gi|116517128|ref|YP_817425.1| 30S ribosomal protein S2 [Streptococcus pneumoniae D39] gi|38258367|sp|Q8CWM8|RS2_STRR6 RecName: Full=30S ribosomal protein S2 gi|122277729|sp|Q04HW3|RS2_STRP2 RecName: Full=30S ribosomal protein S2 gi|15459726|gb|AAL00822.1| 30S Ribosomal protein S2 [Streptococcus pneumoniae R6] gi|116077704|gb|ABJ55424.1| ribosomal protein S2 [Streptococcus pneumoniae D39] Length = 259 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 241 ETQADSIEEI 250 >gi|167465703|ref|ZP_02330792.1| 30S ribosomal protein S2 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 222 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 96/222 (43%), Positives = 146/222 (65%), Gaps = 1/222 (0%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A + G ILFV Sbjct: 1 EAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSLAEENGTILFV 60 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFT 131 TK QA D V E A+R + +N +WLGG +TN++T+ + I +LR+LE++ + Sbjct: 61 GTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFQTIQKRINRLRELEKMEEDGTFDLLP 120 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 KKE + + +++D+L++ L GI+ M GLP +FV+D +E++A+ EAR+L IPIV +VDTN Sbjct: 121 KKEVILLRKEKDRLEKFLGGIKGMKGLPSALFVIDPRKERIAVAEARKLGIPIVGIVDTN 180 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +PD +DYVIPGNDD+ R++ L +A A I+ + + Sbjct: 181 CDPDEIDYVIPGNDDAIRAVKLLTAKMADAVIESHQGEETTA 222 >gi|152995301|ref|YP_001340136.1| 30S ribosomal protein S2 [Marinomonas sp. MWYL1] gi|189044943|sp|A6VUS2|RS2_MARMS RecName: Full=30S ribosomal protein S2 gi|150836225|gb|ABR70201.1| ribosomal protein S2 [Marinomonas sp. MWYL1] Length = 244 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 108/252 (42%), Positives = 156/252 (61%), Gaps = 9/252 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R LL G FGH+ WNPKM+ +IF RN HII+L TVP L AL+++ Sbjct: 1 MPTVSMRDLLLVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNNALELVKKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++LFV TK AS + E A RS VN +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 AENKNKVLFVGTKRAASKTIKEQAARSGMPYVNHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ ++ GI+DMGGLPD++FVVD + E++AI+EA +L Sbjct: 121 MSDGTFDKLTKKEALMRTRELEKLELSMGGIKDMGGLPDVLFVVDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNSNPD VDY+IP NDD+ R++ L+ A A ++G T Sbjct: 181 IPVIGIVDTNSNPDGVDYIIPANDDAIRAVQLYVGAFADAVLEGRNA--------TAGTA 232 Query: 242 ETVVHSKEGMQL 253 + V E + Sbjct: 233 DEFVEVSEATEA 244 >gi|146308074|ref|YP_001188539.1| 30S ribosomal protein S2 [Pseudomonas mendocina ymp] gi|166226741|sp|A4XWU1|RS2_PSEMY RecName: Full=30S ribosomal protein S2 gi|145576275|gb|ABP85807.1| SSU ribosomal protein S2P [Pseudomonas mendocina ymp] Length = 247 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 108/231 (46%), Positives = 148/231 (64%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LR+LE Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGSPFVDHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G + Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRGRSNAGGA 231 >gi|88808497|ref|ZP_01124007.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7805] gi|88787485|gb|EAR18642.1| 30S ribosomal protein S2 [Synechococcus sp. WH 7805] Length = 239 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 139/235 (59%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEATRCGGSYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 EASGAIAMRPKKEGAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGSNEQRGGD 235 >gi|300114876|ref|YP_003761451.1| 30S ribosomal protein S2 [Nitrosococcus watsonii C-113] gi|299540813|gb|ADJ29130.1| ribosomal protein S2 [Nitrosococcus watsonii C-113] Length = 268 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 117/268 (43%), Positives = 163/268 (60%), Gaps = 4/268 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM YIF +RNN HII+L +T+P+ +A + Sbjct: 1 MANVTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYIEATNYLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK A + V E A R VNS+WLGGM+TN++TV +SI++L DLE + Sbjct: 61 ATNKGTVLFVGTKRAAQEAVREEAGRCGMPYVNSRWLGGMLTNFQTVRRSIKRLHDLEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K+E L + R RDKL+ L GI++M LPD +FV+D E++A+ EA +L Sbjct: 121 IQDGSLDRLKKREALTVRRDRDKLESNLGGIKNMTHLPDALFVIDVEHERIAVDEAVKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA- 240 IP+VAVVDTNS+P DY+IPGNDD+ R+I L+ +A IDG + K Sbjct: 181 IPVVAVVDTNSDPRKADYIIPGNDDAIRAIRLYLRGIADGIIDGRTAAAASASKAGKDEF 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E SKEG E + S +S+ DG Sbjct: 241 VEMEETSKEGTLTE--AMSGKSASTDGS 266 >gi|330504244|ref|YP_004381113.1| 30S ribosomal protein S2 [Pseudomonas mendocina NK-01] gi|328918530|gb|AEB59361.1| 30S ribosomal protein S2 [Pseudomonas mendocina NK-01] Length = 246 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 107/230 (46%), Positives = 148/230 (64%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI++LR+LE Sbjct: 61 AAGKNKILFVGTKRSAGKIVREEAARCGSPFVDHRWLGGMLTNYKTIRASIKRLRELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 SQDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP++ +VDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G + Sbjct: 181 IPVIGIVDTNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRGRSNAGG 230 >gi|254439142|ref|ZP_05052636.1| ribosomal protein S2 [Octadecabacter antarcticus 307] gi|198254588|gb|EDY78902.1| ribosomal protein S2 [Octadecabacter antarcticus 307] Length = 259 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 130/232 (56%), Positives = 177/232 (76%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ +I+ +RN HI+DL+QT+PML AL V+ DTVA+GG Sbjct: 1 MRQLLEAGVHFGHQKQRWNPKMQEFIYGQRNGIHIMDLTQTLPMLDAALNVVRDTVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA + EAA++SAQ+ +N +WLGG +TNW+T+S+ I KLR+++E + Sbjct: 61 RVLFVGTKRQAQTPIKEAAEKSAQFYMNHRWLGGTLTNWETISKRIAKLREIDEAAERGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER + KL+ +L GIRDMGG+PDL+FV+D N+E LAI EA +L IP+VAV Sbjct: 121 EGMTKKERLGMERIQGKLEASLGGIRDMGGVPDLLFVIDVNKEDLAIAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 VDTN +P +DY+IPGNDD++R+IAL+ DL A AA+DG+ Q G D Sbjct: 181 VDTNCSPSGIDYIIPGNDDAARAIALYTDLAARAALDGMTAQMGAAGIDIGE 232 >gi|162448000|ref|YP_001621132.1| 30S ribosomal protein S2 [Acholeplasma laidlawii PG-8A] gi|189044925|sp|A9NHC6|RS2_ACHLI RecName: Full=30S ribosomal protein S2 gi|161986107|gb|ABX81756.1| small subunit ribosomal protein S2 [Acholeplasma laidlawii PG-8A] Length = 342 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 107/284 (37%), Positives = 162/284 (57%), Gaps = 10/284 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLESGV FGH+ WNPKM YIF R + HIIDL +T ++KA + D Sbjct: 1 MAVVSMKQLLESGVHFGHQTRRWNPKMAPYIFTSRKDIHIIDLKRTALEIEKAYAALYDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 GG +LFV TK QAS+ + E A R+ Q+ V+ +WLGG +TN+KT+ Q I+ L Sbjct: 61 AKDGGTVLFVGTKKQASEAIKEEAIRAGQFYVDHRWLGGTLTNFKTIRQRIKLLHSLYAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L + R+R KL+R L GI+DM +P +FVVD E++A++EAR+L Sbjct: 121 EADGTWAKLPKKEVLGLSRQRIKLERFLGGIKDMQRIPQALFVVDPRTEEIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTN +PDLVDY+IP NDD+ R++ L ++A+A ++ + + Sbjct: 181 IPVFGIVDTNCDPDLVDYIIPANDDAIRAVKLLTWVMANAVVEANGGVVEKYEDEENAPF 240 Query: 242 ETVVHSKEGMQLEE---------DSQSSESSVLDGQEVAVVPEL 276 E K + ++ D Q+ ++ + V PE+ Sbjct: 241 EQDEPRKPSQKPKQNRPENKPRFDKQAPRAAAKPEVKAEVKPEV 284 >gi|186476096|ref|YP_001857566.1| 30S ribosomal protein S2 [Burkholderia phymatum STM815] gi|238691307|sp|B2JIC6|RS2_BURP8 RecName: Full=30S ribosomal protein S2 gi|184192555|gb|ACC70520.1| ribosomal protein S2 [Burkholderia phymatum STM815] Length = 250 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 165/243 (67%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + EAA+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAEAAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ VDYVIPGNDD+S+++AL+ VA A ++G A + + A G+ Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDASKAVALYTQGVADAILEGRANAVNEVVQAVRGGDGDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|222824093|ref|YP_002575667.1| 30S ribosomal protein S2 [Campylobacter lari RM2100] gi|254764464|sp|B9KCX7|RS2_CAMLR RecName: Full=30S ribosomal protein S2 gi|222539315|gb|ACM64416.1| 30S ribosomal protein S2 [Campylobacter lari RM2100] Length = 261 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 114/264 (43%), Positives = 167/264 (63%), Gaps = 5/264 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +EK+A+QEA RL+IP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLKIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVD+ IPGNDD+ RS+ LFC +A A +G A + D ++ E Sbjct: 182 VAPLDTNCDPDLVDFPIPGNDDAIRSVQLFCQEMAEAINEGKALREQ----DGEANEEQP 237 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 + +E ++ E++ S E D + Sbjct: 238 ISEEEKKEVLEEAMSEEDFEGDKE 261 >gi|257876612|ref|ZP_05656265.1| ribosomal protein S2 [Enterococcus casseliflavus EC20] gi|257810778|gb|EEV39598.1| ribosomal protein S2 [Enterococcus casseliflavus EC20] Length = 257 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 108/257 (42%), Positives = 163/257 (63%), Gaps = 3/257 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ A + + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNVAEEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 LFV TK QA + + E A RS QY VN +WLGG +TNW+T+ + + +L+ + ++ + Sbjct: 61 VALFVGTKKQAQEAIKEEAIRSGQYYVNHRWLGGTLTNWETIQKRVARLKQINKMEEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + + ++R++L++ L GI DM +PD+M+VVD +E++AIQEAR+L IPIVA Sbjct: 121 FAVLPKKEVVGLNKERERLEKFLGGIADMPRIPDVMYVVDPRKERIAIQEARKLNIPIVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTN +PD +D VIP NDD+ R++ L +A A I+G + D + Sbjct: 181 MVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQGEDQVAEEDFAAESTENAT 240 Query: 247 SKEGM--QLEEDSQSSE 261 S E + +E D+ S+E Sbjct: 241 SIEEIVDVVEGDNASAE 257 >gi|28899092|ref|NP_798697.1| 30S ribosomal protein S2 [Vibrio parahaemolyticus RIMD 2210633] gi|153839721|ref|ZP_01992388.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ3810] gi|260361367|ref|ZP_05774432.1| ribosomal protein S2 [Vibrio parahaemolyticus K5030] gi|260876826|ref|ZP_05889181.1| ribosomal protein S2 [Vibrio parahaemolyticus AN-5034] gi|260895880|ref|ZP_05904376.1| ribosomal protein S2 [Vibrio parahaemolyticus Peru-466] gi|260900386|ref|ZP_05908781.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ4037] gi|31340375|sp|Q87MD8|RS2_VIBPA RecName: Full=30S ribosomal protein S2 gi|28807316|dbj|BAC60581.1| ribosomal protein S2 [Vibrio parahaemolyticus RIMD 2210633] gi|149746757|gb|EDM57745.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ3810] gi|308089355|gb|EFO39050.1| ribosomal protein S2 [Vibrio parahaemolyticus Peru-466] gi|308091373|gb|EFO41068.1| ribosomal protein S2 [Vibrio parahaemolyticus AN-5034] gi|308108613|gb|EFO46153.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ4037] gi|308113660|gb|EFO51200.1| ribosomal protein S2 [Vibrio parahaemolyticus K5030] gi|328474371|gb|EGF45176.1| 30S ribosomal protein S2 [Vibrio parahaemolyticus 10329] Length = 242 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G + + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEGRNKDVAVVAEKDGFVE 240 >gi|227495069|ref|ZP_03925385.1| ribosomal protein S2 [Actinomyces coleocanis DSM 15436] gi|226831521|gb|EEH63904.1| ribosomal protein S2 [Actinomyces coleocanis DSM 15436] Length = 269 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 115/268 (42%), Positives = 170/268 (63%), Gaps = 2/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERNN +IIDL QTV + +A + + +T Sbjct: 1 MALVTMRQLLESGVHFGHQTRRWNPKMKRFILTERNNIYIIDLHQTVADIDRAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG ILFV TK QA + + E A+R VN +WLGGM+TN+ TV + IQ++++LE+ Sbjct: 61 VAHGGNILFVGTKKQAQEAIEEQAQRVGMPYVNHRWLGGMLTNFNTVYKRIQRMKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L + R+++KL R+L GIRDM +P +++VDT +E LAI EA++L Sbjct: 121 DFDDVASSGRTKKELLMMRREQEKLARSLGGIRDMQKVPSALWIVDTKKEHLAIAEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VDY IPGNDD+ RS+ + +++ A G+ + ++A Sbjct: 181 NIPVVAILDTNCDPDEVDYGIPGNDDAIRSVGILTRVISDAVAAGLVARSEKRNRAGEAA 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQ 268 + E L + E+ + Sbjct: 241 EAEPMAEWERDLLATEEAPVEAPAETEE 268 >gi|11467687|ref|NP_050739.1| ribosomal protein S2 [Guillardia theta] gi|6094137|sp|O78482|RR2_GUITH RecName: Full=30S ribosomal protein S2, chloroplastic gi|3603012|gb|AAC35673.1| ribosomal protein S2 [Guillardia theta] Length = 235 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 140/221 (63%), Gaps = 1/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ +LLESGV FGH+ WNPKM YI+ ERN HIIDL QT +L +A + + + Sbjct: 3 ITLAELLESGVHFGHQARRWNPKMFPYIYAERNGIHIIDLVQTAQLLTEACEFVKKSAEE 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G + LFV TK QA+ + + A+R + +N +WLGG++TNW T+ +++L+DLE Sbjct: 63 GKKFLFVGTKRQAASIIAQEAERCGAFYINQRWLGGILTNWFTIRTRVERLKDLELKEET 122 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE + R+ +KLKR L+GI++M LPDL+ +VD RE A+QE R L IPI Sbjct: 123 GYLDKLPKKEAAGLRRELEKLKRNLNGIKNMKRLPDLVVIVDQKRETTAVQECRTLGIPI 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN NPDL D IPGNDD+ RSI L + + +G Sbjct: 183 ISILDTNCNPDLTDIAIPGNDDAIRSIKLIITKLTDSICEG 223 >gi|210609953|ref|ZP_03288182.1| hypothetical protein CLONEX_00366 [Clostridium nexile DSM 1787] gi|210152699|gb|EEA83705.1| hypothetical protein CLONEX_00366 [Clostridium nexile DSM 1787] Length = 253 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ISD Sbjct: 6 MSVISMKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIYIIDLQKSVGKVDEAYKAISDI 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+D+E + Sbjct: 66 AAEGGTILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKDIERM 125 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + I+++ +KL++ L GI+DM PD +FVVD +E++ +QEA L Sbjct: 126 AEDGTFDVLPKKEVIEIKKEWEKLEKNLGGIKDMKKAPDAIFVVDPKKERICVQEAHTLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 186 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVAKMADAVIEA 229 >gi|323497976|ref|ZP_08102985.1| 30S ribosomal protein S2 [Vibrio sinaloensis DSM 21326] gi|323317021|gb|EGA70023.1| 30S ribosomal protein S2 [Vibrio sinaloensis DSM 21326] Length = 242 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+DLE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAATSVSEGRNKDVAVAAEKDGFVE 240 >gi|253999120|ref|YP_003051183.1| 30S ribosomal protein S2 [Methylovorus sp. SIP3-4] gi|253985799|gb|ACT50656.1| ribosomal protein S2 [Methylovorus sp. SIP3-4] Length = 249 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 111/225 (49%), Positives = 158/225 (70%), Gaps = 1/225 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM +IF +RN HI++L +T+P+ + AL+ + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPLFEDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GRILFV TK QA D + E A+R+ VN +WLGGM+TN+KTV QSI++L D E +L Sbjct: 62 NKGRILFVGTKRQARDIMKEEAERANCAYVNHRWLGGMLTNFKTVKQSIKRLNDYETMLQ 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L +R+ +KL+R++ GI++MGGLPD +F+VD E A+ EA +L IP Sbjct: 122 DGSLDKFGKKEALGYKREVEKLQRSIGGIKEMGGLPDAIFIVDVGHESGAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++ VVDTN++PD V YVIPGNDDSSR+I L+ +A A ++G ++ Sbjct: 182 VIGVVDTNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEGRSQ 226 >gi|149072059|ref|YP_001293550.1| 30S ribosomal protein S2 [Rhodomonas salina] gi|209573644|sp|A6MVX1|RR2_RHDSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|134303010|gb|ABO70814.1| 30S ribosomal protein S2 [Rhodomonas salina] Length = 243 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 104/238 (43%), Positives = 145/238 (60%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +LLE+GV FGH++ WNPKM YI+ ERN HIIDL QT +L +A + Sbjct: 1 MAVVTLAELLEAGVHFGHQSRRWNPKMFPYIYAERNGIHIIDLVQTAQLLTQACDFVRTA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA+ V + A+R Y VN +WLGG++TNW T+ +++L+DLE Sbjct: 61 SEQGKSFLFVGTKRQAAAVVAQEAERCGAYYVNQRWLGGILTNWFTIRTRVERLKDLENK 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ +KL++ LDGI+ M LPDL+ VVD RE A+QE R+L Sbjct: 121 EESGYLDQLPKKETAILRRELEKLRKNLDGIKTMKRLPDLVVVVDQKRESTAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPIV+++DTN NP+L D IP NDD+ RSI L +A + +G + S DT+ Sbjct: 181 IPIVSILDTNCNPELADIPIPANDDAIRSIKLILGKIADSISEGNNGKVSSDQEDTQE 238 >gi|261253728|ref|ZP_05946301.1| SSU ribosomal protein S2p (SAe) [Vibrio orientalis CIP 102891] gi|260937119|gb|EEX93108.1| SSU ribosomal protein S2p (SAe) [Vibrio orientalis CIP 102891] Length = 242 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + VA++ +G + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAVATSVTEGRNKDVAVAAEKDGFVE 240 >gi|308176746|ref|YP_003916152.1| 30S ribosomal protein S2 [Arthrobacter arilaitensis Re117] gi|307744209|emb|CBT75181.1| 30S ribosomal protein S2 [Arthrobacter arilaitensis Re117] Length = 274 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 110/251 (43%), Positives = 167/251 (66%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R+LL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRELLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSFIDRAYEFVKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TVS+ +Q++++LEE Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQANRVGQPYVNQRWLGGMLTNFQTVSKRVQRMKELEEI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L ++R+ KL+ L GIR++ P +++VDT +E LAI EA++L Sbjct: 121 NFEDVAGSGHTKKELLLLKRELTKLQNNLGGIRNLTRTPSAIWIVDTKKEHLAIDEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD V Y IPGNDD+ RS+ L +VA A +G+ +++ ++ A Sbjct: 181 GIPVVAILDTNCDPDEVTYPIPGNDDAIRSVNLLTRVVADAVAEGLIAKNNKAAGKSEGA 240 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 241 AEPMAEWEREL 251 >gi|225570245|ref|ZP_03779270.1| hypothetical protein CLOHYLEM_06341 [Clostridium hylemonae DSM 15053] gi|225161040|gb|EEG73659.1| hypothetical protein CLOHYLEM_06341 [Clostridium hylemonae DSM 15053] Length = 261 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 96/224 (42%), Positives = 148/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Q ISD Sbjct: 13 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYQAISDI 72 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + ++R + VN +WLGGM+TN+KT+ I +L+++E + Sbjct: 73 AAEGGSILFVGTKKQAQDAIKTESERCGMFYVNERWLGGMLTNFKTIKSRINRLKEIERM 132 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI++M PD +FVVD +E++ +QEA L Sbjct: 133 SEDGTFDVLPKKEVIQLKKEWEKLEKNLGGIKEMKKAPDAIFVVDPKKERICVQEAHTLG 192 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 193 IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 236 >gi|319937406|ref|ZP_08011813.1| 30S ribosomal protein S2 [Coprobacillus sp. 29_1] gi|319807772|gb|EFW04365.1| 30S ribosomal protein S2 [Coprobacillus sp. 29_1] Length = 288 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 103/258 (39%), Positives = 162/258 (62%), Gaps = 3/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + +A + D Sbjct: 1 MAVISMKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLKKSSDKIDEAYAAMMDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG++LFV TK QA + V A+RS + VNS+WLGG +TN+KT+ + I++L++LE++ Sbjct: 61 VAKGGKVLFVGTKKQAQEAVQLEAQRSGSFYVNSRWLGGTLTNFKTIQKRIRRLKELEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + FTKKE + +++++ KL++ L GI++M LP+ +FVVD E A+ EA+ L Sbjct: 121 DEDGTLELFTKKEAILLKKEQAKLEKNLGGIKEMRRLPNALFVVDPKVEHNAVAEAKILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTN +PD VDYVIP NDD+ R++ L +A A + A+ A K Sbjct: 181 IPVFGIVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADAVCE--AKGEPLTVAYVKDED 238 Query: 242 ETVVHSKEGMQLEEDSQS 259 + V + + E+S+ Sbjct: 239 DKEVSMNDAVASVEESKQ 256 >gi|317495171|ref|ZP_07953541.1| ribosomal protein S2 [Gemella moribillum M424] gi|316914593|gb|EFV36069.1| ribosomal protein S2 [Gemella moribillum M424] Length = 246 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVDEAYEFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA D + E A+RS QY +N +WLGG +TN+KT+ I ++ ++E++ Sbjct: 61 ADQGGKMLFVGTKKQAQDAIKEEAERSGQYYINHRWLGGTLTNYKTIKGRIDRIAEIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++ DKL + L GIR+M G+PD +FVVD +E AI EA++L Sbjct: 121 EADGVFEVLPKKEVIELRKEYDKLNKFLGGIREMKGMPDAIFVVDPKKEHNAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP+V +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 181 IPVVGIVDTNCDPDDVDYVIPANDDAIRAVKLLTAKMADAFV 222 >gi|313905944|ref|ZP_07839299.1| ribosomal protein S2 [Eubacterium cellulosolvens 6] gi|313469204|gb|EFR64551.1| ribosomal protein S2 [Eubacterium cellulosolvens 6] Length = 248 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 102/233 (43%), Positives = 151/233 (64%), Gaps = 1/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH WNPKM YI+ ERN +IIDL ++V M+ A + I+D Sbjct: 1 MSVISMKQLLEAGVHFGHLTRRWNPKMAPYIYTERNGIYIIDLQKSVGMVDDAYRAIADV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGRILFV TK QA D + A+R ++ VN +WLGGM+TN+KTV I +L+++E++ Sbjct: 61 VADGGRILFVGTKKQAQDTIKAEAERCGEFFVNERWLGGMLTNFKTVQTRIARLKEIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE + ++ +KL++ + GI+DM +PD +FVVD +EK+ +QEA L Sbjct: 121 QENGTFDVLPKKEVAGLLKELEKLQKNIGGIKDMKKIPDAIFVVDPKKEKICVQEAHNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 I ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Q G Sbjct: 181 ITLIGICDTNCDPEDLDYVIPGNDDAIRAVKLLVSKMADAVIEAKQGQAMDAG 233 >gi|319946093|ref|ZP_08020341.1| 30S ribosomal protein S2 [Streptococcus australis ATCC 700641] gi|319747739|gb|EFV99984.1| 30S ribosomal protein S2 [Streptococcus australis ATCC 700641] Length = 310 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 102/251 (40%), Positives = 162/251 (64%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 51 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 110 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA++ V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 111 AANDAVVLFVGTKKQAAEAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 170 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI +M +PD+M+VVD ++E++A++EA++L Sbjct: 171 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEEMPRIPDVMYVVDPHKEQIAVKEAKKLG 230 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + +A Sbjct: 231 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDAVASVEAELAA 290 Query: 241 GETVVHSKEGM 251 ET S E + Sbjct: 291 TETQADSIEEI 301 >gi|52629053|gb|AAU27794.1| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 271 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 117/254 (46%), Positives = 160/254 (62%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S Sbjct: 18 MNNVSMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRL 77 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A D + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ Sbjct: 78 AANKAKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM 137 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLR Sbjct: 138 KEKGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLR 197 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG + Sbjct: 198 IPVIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDSEFV 257 Query: 242 ETVVHSKEGMQLEE 255 E +S E + E Sbjct: 258 EVTSNSNEEEKSGE 271 >gi|224825013|ref|ZP_03698119.1| ribosomal protein S2 [Lutiella nitroferrum 2002] gi|224602684|gb|EEG08861.1| ribosomal protein S2 [Lutiella nitroferrum 2002] Length = 242 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 109/239 (45%), Positives = 162/239 (67%), Gaps = 1/239 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM +YIF RN HII+L +T+P+ +A + + A Sbjct: 4 NVTMRQMLEAGVHFGHQTRFWNPKMAQYIFGSRNKIHIINLEKTLPLFVEAQEYVRRLAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +LFV TK QA + V E A R V+ +WLGGM+TN+KTV QSI++L + +L Sbjct: 64 NKGTVLFVGTKRQAREIVREEAARCGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKRAILE 123 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G+ KKE L++ER+ +KL+R+L GI+DM GLPD +FV+DT +K + EA++L IP Sbjct: 124 SSGDTGYNKKELLDLEREVEKLERSLGGIKDMKGLPDAIFVIDTGYQKGTVVEAKKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 ++ VVDTN++P+ ++YVIPGNDDS+R+I L+ +A A ++G A+ + A + E Sbjct: 184 LIGVVDTNNSPEGINYVIPGNDDSNRAIRLYARGIADAVLEGRAQSLQEIVAAEPAQAE 242 >gi|59712569|ref|YP_205345.1| 30S ribosomal protein S2 [Vibrio fischeri ES114] gi|197336329|ref|YP_002156790.1| ribosomal protein S2 [Vibrio fischeri MJ11] gi|75506956|sp|Q5E3D9|RS2_VIBF1 RecName: Full=30S ribosomal protein S2 gi|238690250|sp|B5F9X6|RS2_VIBFM RecName: Full=30S ribosomal protein S2 gi|59480670|gb|AAW86457.1| 30S ribosomal subunit protein S2 [Vibrio fischeri ES114] gi|197317819|gb|ACH67266.1| ribosomal protein S2 [Vibrio fischeri MJ11] Length = 242 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 159/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNEALAELAKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L+D E Sbjct: 61 GSKKGKVLFVGTKRAASEAVKEAAINSDQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL+++L GI++M GLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALMRTRDMEKLEKSLGGIKNMNGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R+I L+ + A A G + + + Sbjct: 181 IPVFAVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADAVKSGRNQDVAAVAEKDGFVE 240 >gi|291563111|emb|CBL41927.1| SSU ribosomal protein S2P [butyrate-producing bacterium SS3/4] Length = 254 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + ++D Sbjct: 14 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVADI 73 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + A+R Y VN +WLGGM+TN+KT+ I +L+ +E++ Sbjct: 74 AAEGGTILFVGTKKQAQDAIKTEAERCGMYYVNERWLGGMLTNFKTIQSRIARLKAIEKM 133 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++++ +KL++ L GI++M +PD +F+VD +E++ +QEA L Sbjct: 134 SEDGTFDVLPKKEVIELKKEWEKLEKNLGGIKEMKKIPDAIFIVDPKKERICVQEAHTLG 193 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 194 ITLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQ 239 >gi|300858731|ref|YP_003783714.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis FRC41] gi|300686185|gb|ADK29107.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis FRC41] gi|302206438|gb|ADL10780.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis C231] gi|302330994|gb|ADL21188.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis 1002] gi|308276680|gb|ADO26579.1| 30S ribosomal protein S2 [Corynebacterium pseudotuberculosis I19] Length = 276 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 109/258 (42%), Positives = 169/258 (65%), Gaps = 2/258 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTFINEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG IL+V TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTILYVGTKKQAQESVKNEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EN G TKKE L + R+R KL+R L GI DM +P M+V+DTN+E +A+ EA +L Sbjct: 121 DAAENGYDGRTKKEVLMLTRERTKLERVLGGIADMNKIPSAMWVIDTNKEHIAVSEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD+V++ +PGNDD+ RSI + +++SA I+G + A K A Sbjct: 181 NIPVVAILDTNCDPDVVNFPVPGNDDAIRSIDVLTRVISSAVIEGKKAREERALAAAKEA 240 Query: 241 GETVVHSKEGMQLEEDSQ 258 ++ ++E + Sbjct: 241 AGDANKTEVAAKVEATEE 258 >gi|164454441|dbj|BAF96777.1| ribosomal protein S2 [Shewanella livingstonensis] Length = 311 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 109/241 (45%), Positives = 159/241 (65%), Gaps = 1/241 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 69 TMTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISN 128 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 ++ G++LFV TK A + + +A QY V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 129 IASKKGKVLFVGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELES 188 Query: 122 L-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ TKKE L R+ DKL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 189 QSVDGTFDKLTKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNL 248 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VAVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G + + Sbjct: 249 GIPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANAGRGQDLAVQAEQDGFV 308 Query: 241 G 241 Sbjct: 309 E 309 >gi|161353762|ref|YP_381532.2| 30S ribosomal protein S2 [Synechococcus sp. CC9605] gi|260435058|ref|ZP_05789028.1| ribosomal protein S2 [Synechococcus sp. WH 8109] gi|209573683|sp|Q3AKA5|RS2_SYNSC RecName: Full=30S ribosomal protein S2 gi|260412932|gb|EEX06228.1| ribosomal protein S2 [Synechococcus sp. WH 8109] Length = 238 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 96/238 (40%), Positives = 141/238 (59%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEAARCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D++ Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRHGSNDQRGGDSEG 238 >gi|148242373|ref|YP_001227530.1| 30S ribosomal protein S2 [Synechococcus sp. RCC307] gi|166226765|sp|A5GTG8|RS2_SYNR3 RecName: Full=30S ribosomal protein S2 gi|147850683|emb|CAK28177.1| 30S ribosomal protein S2 [Synechococcus sp. RCC307] Length = 235 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 92/225 (40%), Positives = 137/225 (60%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM+RYI C RN HIIDL QT + A + + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMQRYIHCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QA++ V A R VN +WLGGM+TNW T+ I++L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQAAEVVALEASRCGASYVNQRWLGGMLTNWSTMRARIERLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ D+L++ L G+++M LPD++ ++D RE A+ E ++L Sbjct: 121 ESSGAIAMRPKKEASVLRRELDRLQKYLGGLKNMRRLPDVVVLIDQKREYNAVLECQKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V+++DTN +PDL D IP NDD+ RS+ L +A A +G Sbjct: 181 IPVVSMLDTNCDPDLCDVPIPCNDDAVRSVQLIIGRLADAINEGR 225 >gi|87124309|ref|ZP_01080158.1| 30S ribosomal protein S2 [Synechococcus sp. RS9917] gi|86167881|gb|EAQ69139.1| 30S ribosomal protein S2 [Synechococcus sp. RS9917] Length = 239 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEASRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVILVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + GAD Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLSRLADAINEGRHGANDQRGAD 235 >gi|15895063|ref|NP_348412.1| 30S ribosomal protein S2 [Clostridium acetobutylicum ATCC 824] gi|25009216|sp|Q97I66|RS2_CLOAB RecName: Full=30S ribosomal protein S2 gi|15024759|gb|AAK79752.1|AE007688_1 Ribosomal protein S2 [Clostridium acetobutylicum ATCC 824] gi|325509201|gb|ADZ20837.1| 30S ribosomal protein S2 [Clostridium acetobutylicum EA 2018] Length = 233 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 143/230 (62%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIDEAYNFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G ILFV TK QA + + E + R+ + VN++WLGGM+TN+ T+ I KL L+++ Sbjct: 61 SEQGKDILFVGTKKQAQEAIAEESVRAGMHFVNNRWLGGMLTNFNTIKTRIAKLNGLKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 + KKE + + + +KL + L GI +M +FVVD +EK AI EA+ L Sbjct: 121 EEDGTFDVLPKKEVIILRNEEEKLVKNLGGIVNMTQSNIGALFVVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 GIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVRLITSKIADAIIEGRQGEQ 230 >gi|82409855|gb|ABB73964.1| SSU ribosomal protein S2P [Nitrosospira multiformis ATCC 25196] Length = 260 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 114/243 (46%), Positives = 158/243 (65%), Gaps = 2/243 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ W+PKM YIF RN HII+L +T+ M Q+A+ + A Sbjct: 14 SVTMRQMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAA 73 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK QA D V E A R V+ +WLGGM+TN+KT+ QS+++L D+E ++ Sbjct: 74 NKGTILFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMME 133 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L+++R+ +KL R+L GI+DM LPD MFV+D +K AI EAR+L IP Sbjct: 134 DGTLDKLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIP 193 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGE 242 IV +VD+N +P VDYVIPGNDDSS++I L+ VA A ++G + + D + A E Sbjct: 194 IVGIVDSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGRNQAIQEIVQGDFEEADE 253 Query: 243 TVV 245 V Sbjct: 254 AVA 256 >gi|38234087|ref|NP_939854.1| 30S ribosomal protein S2 [Corynebacterium diphtheriae NCTC 13129] gi|61215594|sp|Q6NGK5|RS2_CORDI RecName: Full=30S ribosomal protein S2 gi|38200349|emb|CAE50035.1| 30S ribosomal protein S2 [Corynebacterium diphtheriae] Length = 266 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 158/227 (69%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAYEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG IL+V TK QA + V A+R VN +WLGGM+TN++TVS+ + ++++L+ + Sbjct: 61 VAHGGTILYVGTKKQAQESVKNEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 EN +G TKKE L + R+R KL+R L GI DM P M+VVDTN+E +A+ EA +L Sbjct: 121 DAAENGYEGRTKKEVLMLTRERTKLERVLGGIADMTKTPSAMWVVDTNKEHIAVSEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA++DTN +PD+V++ +PGNDD+ RSI + +++ A I+G Sbjct: 181 NIPVVAILDTNCDPDVVNFPVPGNDDAIRSIDVLTKVISHAVIEGKK 227 >gi|87118627|ref|ZP_01074526.1| 30S ribosomal protein S2 [Marinomonas sp. MED121] gi|86166261|gb|EAQ67527.1| 30S ribosomal protein S2 [Marinomonas sp. MED121] Length = 245 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 114/252 (45%), Positives = 164/252 (65%), Gaps = 9/252 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R LL+ G FGH+ WNPKM+ +IF RN HII+L TVP L +AL+++ Sbjct: 1 MPTVSMRDLLQVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNEALELVKKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++LFV TK AS + E A+RS+ VN +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AENKNKVLFVGTKRAASKTMKEQAQRSSMPYVNHRWLGGMLTNYKTIRASIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + TKKE L R+ +KL+ ++ GI+DMGGLPD++FVVD + E++AI+EA +L Sbjct: 121 MNDGTFEKITKKEALMRTRELEKLELSIGGIKDMGGLPDILFVVDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNSNPD +DYVIP NDD+ R++ L+ A A ++G GA SA Sbjct: 181 IPVIGVVDTNSNPDGIDYVIPANDDAIRAVQLYVTAFADAVLEGR-------GAAAGSAD 233 Query: 242 ETVVHSKEGMQL 253 E V E + Sbjct: 234 E-FVEVSEATEA 244 >gi|315638916|ref|ZP_07894088.1| 30S ribosomal protein S2 [Campylobacter upsaliensis JV21] gi|315481134|gb|EFU71766.1| 30S ribosomal protein S2 [Campylobacter upsaliensis JV21] Length = 262 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM++YIF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKYIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +E++A+ EA RL+IP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKSQPDMIFVIDTVKERIAVAEANRLKIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQ 228 >gi|57505421|ref|ZP_00371349.1| ribosomal protein S2 [Campylobacter upsaliensis RM3195] gi|57016246|gb|EAL53032.1| ribosomal protein S2 [Campylobacter upsaliensis RM3195] Length = 262 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM++YIF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKYIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M PD++FV+DT +E++A+ EA RL+IP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKSQPDMIFVIDTVKERIAVAEANRLKIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQ 228 >gi|254451535|ref|ZP_05064972.1| ribosomal protein S2 [Octadecabacter antarcticus 238] gi|198265941|gb|EDY90211.1| ribosomal protein S2 [Octadecabacter antarcticus 238] Length = 259 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 127/232 (54%), Positives = 180/232 (77%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+++I+ +RN HI+DL+QT+PML AL V+ +TVA+GG Sbjct: 1 MRQLLEAGVHFGHQKQRWNPKMQKFIYGQRNGIHIMDLTQTLPMLDAALNVVRETVAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QA + +AA++SAQ+ +N +WLGG +TNW+TVS+SI +L++++E + Sbjct: 61 RVLFVGTKRQAQSPIKDAAEKSAQFYMNHRWLGGTLTNWQTVSKSILRLKNIDEAAERGF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +G TKKERL +ER++ KL+ +L GIR+MGG+PDL+FV+D N+E LAI EA +L IP+VAV Sbjct: 121 EGLTKKERLGMEREQGKLEASLGGIREMGGVPDLLFVIDVNKEGLAIAEANKLGIPVVAV 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 VDTN +P +DY+IPGNDD++R+IAL+ DL A AA+DG+ Q G D Sbjct: 181 VDTNCSPSGIDYIIPGNDDAARAIALYTDLAARAALDGMTAQMGAAGIDIGE 232 >gi|317153884|ref|YP_004121932.1| 30S ribosomal protein S2 [Desulfovibrio aespoeensis Aspo-2] gi|316944135|gb|ADU63186.1| ribosomal protein S2 [Desulfovibrio aespoeensis Aspo-2] Length = 263 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 106/247 (42%), Positives = 157/247 (63%), Gaps = 1/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++Q+LE+GV FGH+ WNPKM +IF RN HI+DL QTV M A I +T Sbjct: 1 MAYVTMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIMDLQQTVKMFATAHDFIVNT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG++LF+ TK QA + V + A+R+ + V +W+GG +TN++T+ +SI +L+ LE++ Sbjct: 61 AAKGGKVLFIGTKRQAQEAVTQEAQRAGMFYVTHRWMGGTLTNFQTIKKSIDRLKTLEQM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +TKKE + + R+ KL AL GI+DM P FV+D RE +AI E R+L Sbjct: 121 FEDGSISRYTKKEAVGMNREVKKLNLALGGIKDMNDAPKAAFVIDPKREHIAIMECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVD+N +PD+VDY+IPGNDD+ R+I LF +A A ++G A Q + +S Sbjct: 181 IPVVAVVDSNCDPDMVDYIIPGNDDAIRAIKLFAAHMADACLEGAAMQKDFSKGPDESKP 240 Query: 242 ETVVHSK 248 + Sbjct: 241 APKAETA 247 >gi|320162504|ref|YP_004175729.1| 30S ribosomal protein S2 [Anaerolinea thermophila UNI-1] gi|319996358|dbj|BAJ65129.1| 30S ribosomal protein S2 [Anaerolinea thermophila UNI-1] Length = 278 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 116/253 (45%), Positives = 156/253 (61%), Gaps = 3/253 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLESGV FGHR WNP M YIF ERN HIIDL QTV L A ++ DTVA Sbjct: 5 ISMKALLESGVHFGHRTNKWNPHMRPYIFTERNGIHIIDLQQTVKALNTAYNLVRDTVAN 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 GG +LFV TK QA + V E A+R V +W+GG++TNW T Q IQ+L +E + + Sbjct: 65 GGTVLFVGTKRQAQETVREEAERCGMPYVVERWMGGILTNWITFYQRIQELERMERMRDS 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E TKKE L I+R+ D+L+ L GIR M LPDL+FVVD +RE A+ EA ++ IP+ Sbjct: 125 GELSRLTKKEGLLIQREIDRLEVRLGGIRKMKRLPDLLFVVDVDREATAVHEANKMGIPV 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA--GE 242 +A+VDTN +P VDYVIP NDD+ R+I L +A A +G A + + ++ G Sbjct: 185 IALVDTNCDPRGVDYVIPSNDDAIRAIKLLVGKIADAVNEGKAYRKEEVSEESAPVDMGA 244 Query: 243 TVVHSKEGMQLEE 255 V +E + E+ Sbjct: 245 VTVGVEEEVSDED 257 >gi|50085372|ref|YP_046882.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1] gi|61215533|sp|Q6FA53|RS2_ACIAD RecName: Full=30S ribosomal protein S2 gi|49531348|emb|CAG69060.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1] Length = 249 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/251 (43%), Positives = 165/251 (65%), Gaps = 3/251 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G ++++ A+ ++ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQA 238 Query: 240 AGETVVHSKEG 250 GE + E Sbjct: 239 KGEEAPAASEA 249 >gi|255327234|ref|ZP_05368308.1| ribosomal protein S2 [Rothia mucilaginosa ATCC 25296] gi|283458523|ref|YP_003363151.1| 30S ribosomal protein S2 [Rothia mucilaginosa DY-18] gi|255295514|gb|EET74857.1| ribosomal protein S2 [Rothia mucilaginosa ATCC 25296] gi|283134566|dbj|BAI65331.1| ribosomal protein S2 [Rothia mucilaginosa DY-18] Length = 265 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 105/233 (45%), Positives = 162/233 (69%), Gaps = 2/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R++L+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + KA + + T Sbjct: 1 MPVVTMREMLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSLAFIDKAYEAVKST 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ T+S+SI+++++LE++ Sbjct: 61 VAHGGNILFVGTKKQAQEVIAEQATRVNMPYVNHRWLGGMLTNFSTISKSIERMKELEQI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+ +KL++ L GIR++ +P L++VVDT +E LA+ EA++L Sbjct: 121 DFDDVAGSRYTKKELLLMRREFEKLEKTLGGIRNLSKVPSLLWVVDTKKEHLAVNEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP+VA++DTN +PD V + IPGNDD+ RS+ L ++A A G+ +++ Sbjct: 181 GIPVVAILDTNCDPDEVAFPIPGNDDAIRSVNLLTRVIADAVAAGLIERNAKK 233 >gi|83647917|ref|YP_436352.1| 30S ribosomal protein S2 [Hahella chejuensis KCTC 2396] gi|123739861|sp|Q2SBP7|RS2_HAHCH RecName: Full=30S ribosomal protein S2 gi|83635960|gb|ABC31927.1| ribosomal protein S2 [Hahella chejuensis KCTC 2396] Length = 253 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/230 (47%), Positives = 157/230 (68%), Gaps = 1/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R LL++GV FGH+ WNPKM +YIF RN HII+L TVP L AL+ +S+ Sbjct: 1 MSEVSMRDLLKAGVHFGHQTRFWNPKMRKYIFGARNKIHIINLEHTVPALNDALRFVSNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +ILFV TK A + E A R+ VN +WLGGM+TN+KT+ QSI++ RDLE Sbjct: 61 AEKKNKILFVGTKRAAGKIIKEEADRANMPYVNHRWLGGMLTNYKTIRQSIRRYRDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L + R+ DKL+R++ GI+DMGGLPD +FV+D + E++AI+EA +L Sbjct: 121 SQDGTFDKLTKKEVLMLNREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 IP++ VVDTNS+PD VDYVIPGNDD+ R+I ++ VA + + G++ Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIQVYAKAVADSCLHGLSSAAG 230 >gi|169834077|ref|YP_001695568.1| 30S ribosomal protein S2 [Streptococcus pneumoniae Hungary19A-6] gi|238688276|sp|B1IAC8|RS2_STRPI RecName: Full=30S ribosomal protein S2 gi|168996579|gb|ACA37191.1| ribosomal protein S2 [Streptococcus pneumoniae Hungary19A-6] Length = 259 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGDDAVAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 241 ETQADSIEEI 250 >gi|239947073|ref|ZP_04698826.1| ribosomal protein S2 [Rickettsia endosymbiont of Ixodes scapularis] gi|239921349|gb|EER21373.1| ribosomal protein S2 [Rickettsia endosymbiont of Ixodes scapularis] Length = 295 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 132/271 (48%), Positives = 184/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E ++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYTEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE +++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LESEEALMGYTKKEIIDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GE---TVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +DG+ Sbjct: 244 QEHTDKALTSKNVSKLKQAKKFSKTKNIDGE 274 >gi|167767272|ref|ZP_02439325.1| hypothetical protein CLOSS21_01791 [Clostridium sp. SS2/1] gi|167711247|gb|EDS21826.1| hypothetical protein CLOSS21_01791 [Clostridium sp. SS2/1] Length = 235 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 106/238 (44%), Positives = 157/238 (65%), Gaps = 5/238 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + D VA+GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKDCVAQGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D + A+R + VN +WLGGMMTN+KT+ I +L+ ++E+ + Sbjct: 61 KILFVGTKKQAQDSIQAEAERCGMFYVNQRWLGGMMTNFKTIESRIARLKKIKEMEEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K+E L + +++DKL++ L GI +MGGLPD++FVVD +E + +QEA L IP+V Sbjct: 121 FDVLPKREVLELNKEKDKLQKNLGGIEEMGGLPDMIFVVDPKKESICVQEAHTLGIPLVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + DTNS+P+ +DY+IPGNDD+ R++ L +A A I+ + + AD++ E Sbjct: 181 IADTNSDPEELDYIIPGNDDAIRAVKLITSAMADAVIEA----NQGIDADSEEVAEDA 234 >gi|209695851|ref|YP_002263781.1| 30S ribosomal protein S2 [Aliivibrio salmonicida LFI1238] gi|238054498|sp|B6EK57|RS2_ALISL RecName: Full=30S ribosomal protein S2 gi|208009804|emb|CAQ80111.1| 30S ribosomal protein S2 [Aliivibrio salmonicida LFI1238] Length = 243 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 161/243 (66%), Gaps = 1/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++ E + Sbjct: 61 GNKKGKVLFVGTKRAASEAVKEAAINSDQYYVNNRWLGGMLTNFKTVRQSIKRLKEYEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL+++L GI++M GLPD +FV+D + E +A++EA L Sbjct: 121 AQDGTFEQITKKEALMRTRSMEKLEKSLGGIKNMNGLPDALFVIDADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R+I L+ + A + G + + A+ Sbjct: 181 IPVFAVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADSVKSGRNQDVAAAVAEKDGFV 240 Query: 242 ETV 244 E Sbjct: 241 EAE 243 >gi|262369542|ref|ZP_06062870.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046] gi|262315610|gb|EEY96649.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046] Length = 249 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/251 (43%), Positives = 166/251 (66%), Gaps = 3/251 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G ++++ A+ ++ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG--KEYAQSQANAQA 238 Query: 240 AGETVVHSKEG 250 E + E Sbjct: 239 KVEEAKEAPEA 249 >gi|126173688|ref|YP_001049837.1| 30S ribosomal protein S2 [Shewanella baltica OS155] gi|152999977|ref|YP_001365658.1| 30S ribosomal protein S2 [Shewanella baltica OS185] gi|160874598|ref|YP_001553914.1| 30S ribosomal protein S2 [Shewanella baltica OS195] gi|217974060|ref|YP_002358811.1| 30S ribosomal protein S2 [Shewanella baltica OS223] gi|304409562|ref|ZP_07391182.1| ribosomal protein S2 [Shewanella baltica OS183] gi|307303920|ref|ZP_07583673.1| ribosomal protein S2 [Shewanella baltica BA175] gi|166226751|sp|A3D2K5|RS2_SHEB5 RecName: Full=30S ribosomal protein S2 gi|166226752|sp|A6WLA6|RS2_SHEB8 RecName: Full=30S ribosomal protein S2 gi|189044997|sp|A9KUK5|RS2_SHEB9 RecName: Full=30S ribosomal protein S2 gi|254764489|sp|B8E7R6|RS2_SHEB2 RecName: Full=30S ribosomal protein S2 gi|125996893|gb|ABN60968.1| SSU ribosomal protein S2P [Shewanella baltica OS155] gi|151364595|gb|ABS07595.1| ribosomal protein S2 [Shewanella baltica OS185] gi|160860120|gb|ABX48654.1| ribosomal protein S2 [Shewanella baltica OS195] gi|217499195|gb|ACK47388.1| ribosomal protein S2 [Shewanella baltica OS223] gi|304352080|gb|EFM16478.1| ribosomal protein S2 [Shewanella baltica OS183] gi|306912818|gb|EFN43241.1| ribosomal protein S2 [Shewanella baltica BA175] gi|315266839|gb|ADT93692.1| ribosomal protein S2 [Shewanella baltica OS678] Length = 242 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + + E+A Q+ V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASKKGKVLFVGTKRAAGEAIKESALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKELESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAAKAGRGQDLAVQAEQDGFVE 240 >gi|288941758|ref|YP_003443998.1| 30S ribosomal protein S2 [Allochromatium vinosum DSM 180] gi|288897130|gb|ADC62966.1| ribosomal protein S2 [Allochromatium vinosum DSM 180] Length = 242 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 109/238 (45%), Positives = 159/238 (66%), Gaps = 1/238 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM +IF +RN HI++L +T+P+ Q A+ + A GG Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMGAFIFGQRNKIHIVNLEKTLPLYQDAVNFMGTLAANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 +ILFV TK A D + E A+R VN +WLGGM+TN+KT+ QS+++L+DLE + Sbjct: 61 KILFVGTKRAARDAIREEAERCGMPFVNHRWLGGMLTNFKTIRQSVKRLKDLEAMFESGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + F KKE L + R+RDKL+ +L GI++M GLPD +FV+D EK+A+ EA +L IP++ Sbjct: 121 IERFNKKEALGLSRERDKLELSLGGIKNMDGLPDALFVIDVGHEKIAVTEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VVDTN++P VDYVIPGNDD+ R++ L+ A A +DG + + +G S + Sbjct: 181 VVDTNNDPSNVDYVIPGNDDAIRAVRLYIAGAADAILDGRSTAAAMVGRGAGSIQDEA 238 >gi|289208671|ref|YP_003460737.1| ribosomal protein S2 [Thioalkalivibrio sp. K90mix] gi|288944302|gb|ADC72001.1| ribosomal protein S2 [Thioalkalivibrio sp. K90mix] Length = 260 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/263 (41%), Positives = 164/263 (62%), Gaps = 5/263 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ W+PKM YIF ERN HII+L +++PM AL + Sbjct: 1 MSLVTMRQMLEAGVHFGHQTRYWHPKMAPYIFGERNKIHIINLEKSLPMFNDALNFLGKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+I+FV TK A + V E A+R V+ +WLGGM+TN+ TV QSI++L+DLE + Sbjct: 61 AADGGKIMFVGTKRSAREVVAEEARRCGMPFVSHRWLGGMLTNFSTVKQSIKRLKDLETM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K+E L R++DKL+R+L GI+DM +PD MFV+D EK+A+ EA++ Sbjct: 121 DADGSFEVLNKREALTRRREKDKLERSLGGIKDMNRMPDAMFVIDVGYEKIAVAEAKKRG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVD+N +P+ VDYVIPGNDD+ R+I L+ +A I+ + S Sbjct: 181 IPVVAVVDSNHSPEGVDYVIPGNDDAMRAIQLYVAAIADTIIEA----KGAVTTGGVSED 236 Query: 242 ETVVHSKEGMQLEEDSQSSESSV 264 E + + E S+++ ++ Sbjct: 237 EFADAAADAGGNAESSEAAPANP 259 >gi|194476737|ref|YP_002048916.1| 30S ribosomal protein S2 [Paulinella chromatophora] gi|209573619|sp|B1X437|RR2_PAUCH RecName: Full=30S ribosomal protein S2, organellar chromatophore gi|171191744|gb|ACB42706.1| 30S ribosomal protein S2 [Paulinella chromatophora] Length = 239 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 95/235 (40%), Positives = 138/235 (58%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAICMNNAYKWTRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ + + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVIAQEAARCGAAYVNQRWLGGMLTNWTTMRARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ E R+L Sbjct: 121 EGSGSIAMRPKKEAAVLRRELDRLRKYLGGLKNMRRLPDVVILVDQRRETNAVLECRKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL D IP NDD+ RS+ L ++ A +G G D Sbjct: 181 IPLVSMLDTNCDPDLCDVPIPCNDDAVRSVQLVLSRLSDAINEGRHGVQDQRGND 235 >gi|149928184|ref|ZP_01916429.1| 30S ribosomal protein S2 [Limnobacter sp. MED105] gi|149823075|gb|EDM82315.1| 30S ribosomal protein S2 [Limnobacter sp. MED105] Length = 251 Score = 310 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 107/247 (43%), Positives = 157/247 (63%), Gaps = 1/247 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+G FGH+ WNPKM YI+ RN HII+L +TV ML AL+ + A Sbjct: 4 SMREMLEAGCHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTVVMLDDALKFVKRLSANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 G ILFV TK QA + + E A+R V+ +WLGGM+TN+KTV SI++L+D+E ++ + Sbjct: 64 GNILFVCTKRQAKEIIAEEAQRCGMPYVDQRWLGGMLTNFKTVKTSIKRLKDMEAIIADG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE L R+ +KL +++ GI+DM LPD +FV D K+AI EA +L IP+V Sbjct: 124 GTERMSKKEALMFARELEKLNQSIGGIKDMPTLPDAIFVCDVGYHKIAITEAEKLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +VDTN +P V Y+IPGNDDS+R+I L+ VA A + G + + + K + V Sbjct: 184 GIVDTNHSPAGVSYIIPGNDDSARAIRLYARSVADAVLAGRDQAVNDVVEAIKGGDDFVE 243 Query: 246 HSKEGMQ 252 S+EG + Sbjct: 244 VSEEGAE 250 >gi|225018400|ref|ZP_03707592.1| hypothetical protein CLOSTMETH_02347 [Clostridium methylpentosum DSM 5476] gi|224948818|gb|EEG30027.1| hypothetical protein CLOSTMETH_02347 [Clostridium methylpentosum DSM 5476] Length = 242 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM RYIF ERN +IIDL +TV L++A +++ A G Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKLEEAYNFVNELAANGE 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA++ + E A R + VN++WLGGMMTN+KT+ I +L+ L ++ + Sbjct: 61 EILFVGTKKQAAESIKEEATRCGMHFVNARWLGGMMTNFKTIRTRIDRLKQLRKMEEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + + + +KL++ L GI++M LP +FVVD +EK+A+ EA++L IP+VA Sbjct: 121 FALLPKKEVIKLNLEIEKLEKFLGGIKNMKKLPGALFVVDPRKEKIAVAEAKKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDTN +PD +DYVIPGNDD+ R++ L ++A+A ++ Sbjct: 181 IVDTNCDPDEIDYVIPGNDDAIRAVKLISSVMANAVMEAKQ 221 >gi|317969802|ref|ZP_07971192.1| 30S ribosomal protein S2 [Synechococcus sp. CB0205] Length = 239 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 97/239 (40%), Positives = 140/239 (58%), Gaps = 1/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVIALEASRCGAAYVNQRWLGGMLTNWTTMRARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+V+++DTN +PDL D IP NDD+ RS+ L +A A +G + D A Sbjct: 181 IPLVSMLDTNCDPDLCDVPIPCNDDAVRSVQLVLGRLADAINEGRHGSNEQAAYDDVQA 239 >gi|323495362|ref|ZP_08100440.1| 30S ribosomal protein S2 [Vibrio brasiliensis LMG 20546] gi|323310433|gb|EGA63619.1| 30S ribosomal protein S2 [Vibrio brasiliensis LMG 20546] Length = 242 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAATSVTEGRNKDVAAAAEKDGFVE 240 >gi|15902019|ref|NP_346623.1| 30S ribosomal protein S2 [Streptococcus pneumoniae TIGR4] gi|111658653|ref|ZP_01409303.1| hypothetical protein SpneT_02000243 [Streptococcus pneumoniae TIGR4] gi|149012810|ref|ZP_01833755.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP19-BS75] gi|25009217|sp|Q97N56|RS2_STRPN RecName: Full=30S ribosomal protein S2 gi|14973725|gb|AAK76263.1| ribosomal protein S2 [Streptococcus pneumoniae TIGR4] gi|147763241|gb|EDK70180.1| 30S ribosomal protein S2 [Streptococcus pneumoniae SP19-BS75] gi|301802876|emb|CBW35657.1| 30S ribosomal protein S2 [Streptococcus pneumoniae INV200] Length = 259 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFAAL 240 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 241 ETQADSIEEI 250 >gi|169333876|ref|ZP_02861069.1| hypothetical protein ANASTE_00262 [Anaerofustis stercorihominis DSM 17244] gi|169259441|gb|EDS73407.1| hypothetical protein ANASTE_00262 [Anaerofustis stercorihominis DSM 17244] Length = 243 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 102/248 (41%), Positives = 160/248 (64%), Gaps = 6/248 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GVQFGH+ WNPKM+++IF ERN +IIDL QTV ++ A + + Sbjct: 1 MSYIQMKQLLEAGVQFGHQTRRWNPKMKKFIFTERNGIYIIDLQQTVGLVDDACKFVRGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG ILF+ TK QA D V A +S + +N +WLGG +TN++T+S+ I++L +L E+ Sbjct: 61 AEEGGEILFIGTKKQAQDAVKTEAIKSGSHFINQRWLGGTLTNFQTISKRIKRLHELNEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++ +RDKL++ L GI+ M LP +FV+D +E++AI EA++L Sbjct: 121 EQDGTFDVLPKKEVILLKNQRDKLEKFLGGIKHMEKLPSALFVIDPKKERIAIAEAKKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DY IPGNDD+ R+++L +A+A ++G + +++ Sbjct: 181 IPIVAIVDTNCDPDEIDYPIPGNDDAIRAVSLIASTMANAILEGKQGEQM-----EEASA 235 Query: 242 ETVVHSKE 249 E + E Sbjct: 236 EADTEANE 243 >gi|297624995|ref|YP_003706429.1| 30S ribosomal protein S2 [Truepera radiovictrix DSM 17093] gi|297166175|gb|ADI15886.1| ribosomal protein S2 [Truepera radiovictrix DSM 17093] Length = 275 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 173/277 (62%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH WNPK +RYIF ERN IIDL +T+ KA + DT Sbjct: 1 MSYLGMKQLLEAGVHFGHETKRWNPKFKRYIFAERNGIFIIDLQKTLQESDKAFDYLKDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ARGG ILFV TK QA + + A+R +N +WLGG +TN+KT+ +++L++LE + Sbjct: 61 AARGGTILFVGTKKQAQEILAAEARRCGMPYLNERWLGGTLTNFKTIRSRVERLKELERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E+ ++KKE++++ ++ +L+R L GI+DM LPD++FV+D +E +A++EA +LR Sbjct: 121 FEDESILRYSKKEQIDLGKELQRLQRYLGGIKDMTRLPDVLFVIDPTKEAIAVREANKLR 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+ DT+S+PD++DY++PGNDD+ RSI L +A ++ R + +SAG Sbjct: 181 IPVVALADTDSDPDVLDYIVPGNDDAIRSIQLVTARLADTIVE--VRGGAAESVSAESAG 238 Query: 242 E-------TVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 E T V S E M E + SES+ E A Sbjct: 239 ETERETLPTPVSSPEQMIAEAAQRGSESAATGDAEPA 275 >gi|220934333|ref|YP_002513232.1| ribosomal protein S2 [Thioalkalivibrio sp. HL-EbGR7] gi|254764498|sp|B8GPS8|RS2_THISH RecName: Full=30S ribosomal protein S2 gi|219995643|gb|ACL72245.1| ribosomal protein S2 [Thioalkalivibrio sp. HL-EbGR7] Length = 275 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 114/251 (45%), Positives = 162/251 (64%), Gaps = 4/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM +IF ERN HII+L QT+P+ A+ + Sbjct: 1 MSSVTMRQMLEAGVHFGHQTRYWNPKMAPFIFGERNKIHIINLEQTLPLFNDAMNYLGKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK A D + E A R VN +WLGGM+TN+KTV +SI++L+DLE + Sbjct: 61 AGNGGKILFVGTKRSARDTIAEEALRCKMPYVNHRWLGGMLTNFKTVRESIRRLKDLELM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE L R+ +KL+R+L GI+DM GLPD MFV+D EK+A++EA +L Sbjct: 121 REDGTFNRLSKKEALMRTRELEKLERSLGGIKDMNGLPDAMFVIDVGYEKIAVKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN++ + VDYVIPGNDD+ R+I L+ V++AA Q + + Sbjct: 181 IPVIAVVDTNNSIEGVDYVIPGNDDAMRAIQLY---VSAAADAIANAQVTSRATAAPAGD 237 Query: 242 ETVVHSKEGMQ 252 + V +EG + Sbjct: 238 DEFVEVREGAE 248 >gi|118474889|ref|YP_892581.1| 30S ribosomal protein S2 [Campylobacter fetus subsp. fetus 82-40] gi|166225254|sp|A0RQU8|RS2_CAMFF RecName: Full=30S ribosomal protein S2 gi|118414115|gb|ABK82535.1| ribosomal protein S2 [Campylobacter fetus subsp. fetus 82-40] Length = 258 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 107/251 (42%), Positives = 154/251 (61%), Gaps = 1/251 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A Sbjct: 2 VTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E + Sbjct: 62 GKTVLFVGTKKQAGVAIKEYAEKCGMPYVNHRWLGGMMTNFGTIKQSIRKLEVIEAMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL L GIR+M LPD++FV+DT +EK+A+ EA +LR+P+ Sbjct: 122 GSINLLTKKEALMLRRKKEKLLATLGGIRNMKSLPDMVFVIDTVKEKIAVAEANKLRMPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VD+ IPGNDD+ RS+ LFC +A A +G A + + + Sbjct: 182 VAPIDTNCDPDIVDFPIPGNDDAIRSVQLFCQEMAEAINEGKALRDQDEAEQVEPVSQEE 241 Query: 245 VHSKEGMQLEE 255 + E Sbjct: 242 KDEVVAEAMSE 252 >gi|311105983|ref|YP_003978836.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans A8] gi|310760672|gb|ADP16121.1| ribosomal protein S2 [Achromobacter xylosoxidans A8] Length = 249 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 109/246 (44%), Positives = 159/246 (64%), Gaps = 1/246 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L +TV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ Sbjct: 64 NILFVGTKRAARELVATEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEVVVAEGG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ DKL +++ GI+DM GLPD +FV+D K+AI EA+ L IP+VA Sbjct: 124 AERMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAIFVIDVGYHKIAIAEAKTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +PD +DYVIPGNDDS+++IAL+ +A A ++G + + + + E V Sbjct: 184 VVDTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGREQNLNGLVEELGEGQEEFVE 243 Query: 247 SKEGMQ 252 ++ Sbjct: 244 VQDNQA 249 >gi|87302804|ref|ZP_01085615.1| 30S ribosomal protein S2 [Synechococcus sp. WH 5701] gi|87282687|gb|EAQ74645.1| 30S ribosomal protein S2 [Synechococcus sp. WH 5701] Length = 238 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 94/238 (39%), Positives = 139/238 (58%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 SRSGKRFLFVGTKKQASEVIAIEASRCGAAYVNQRWLGGMLTNWSTMRARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ E R+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRENNAVLECRKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+V+++DTN +PDL D IP NDD+ RS+ L +A A +G D ++ Sbjct: 181 IPLVSMLDTNCDPDLADVPIPCNDDAVRSVQLVLGRLADAINEGRHGSQEQRAEDDEA 238 >gi|254247883|ref|ZP_04941204.1| ribosomal protein S2 [Burkholderia cenocepacia PC184] gi|124872659|gb|EAY64375.1| ribosomal protein S2 [Burkholderia cenocepacia PC184] Length = 286 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 43 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAAN 102 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + + Sbjct: 103 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVES 162 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 163 GETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 222 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 223 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAARGDDEYV 282 Query: 245 VH 246 Sbjct: 283 EE 284 >gi|56459953|ref|YP_155234.1| 30S ribosomal protein S2 [Idiomarina loihiensis L2TR] gi|61215387|sp|Q5QXS0|RS2_IDILO RecName: Full=30S ribosomal protein S2 gi|56178963|gb|AAV81685.1| Ribosomal protein S2 [Idiomarina loihiensis L2TR] Length = 242 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 112/235 (47%), Positives = 159/235 (67%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ YIF RN HII+L +TVPM AL + Sbjct: 1 MANVSMRDMLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIINLEKTVPMFNDALSYMQHV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK A++ V EAA QY VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNKGKILFVGTKRAAAEAVKEAAINCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL++ L GI++MGGLPD++FV+D + E ++I+EA L Sbjct: 121 SQDGTFEKLTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHISIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+VVDTNSNPD VDY++PGNDD+ R++ L+ + A A + Q +D Sbjct: 181 IPVVSVVDTNSNPDGVDYIVPGNDDAIRAVQLYLNTAAEAVKEARTAQVEAKDSD 235 >gi|315186474|gb|EFU20234.1| SSU ribosomal protein S2P [Spirochaeta thermophila DSM 6578] Length = 315 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 168/270 (62%), Gaps = 15/270 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A +V+ T Sbjct: 1 MAVVTMKNLLESGVHFGHQKRRWDPRMKKYIFAERNGIHIIDLQKTIQAIKEAYEVVRKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA + A+R + VN +WLGG +TN++T+ +SI +L+ LE++ Sbjct: 61 VLSGKSVLFVGTKRQAQAAIQREAERCGMFYVNHRWLGGTLTNFETIKKSILRLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + +++ +L+R L GI++M LP ++F++DT E +A+ EA++L Sbjct: 121 EVDGTFATMSKKEVSRLMKEKARLQRNLGGIKEMKELPGVVFIIDTKHEAIAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+ VVDTN NP+++D+ IPGNDD+ R+I LF ++A A I+ + Sbjct: 181 IPIIGVVDTNCNPEIIDHPIPGNDDAIRAINLFTKIIADAVIE--------------ADN 226 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 E + E +Q EE S+ +E+A Sbjct: 227 EMGLEVVESLQEEEPIDESQIETGKEEEIA 256 >gi|224368817|ref|YP_002602978.1| 30S ribosomal protein S2 [Desulfobacterium autotrophicum HRM2] gi|259494995|sp|C0QB17|RS2_DESAH RecName: Full=30S ribosomal protein S2 gi|223691533|gb|ACN14816.1| RpsB [Desulfobacterium autotrophicum HRM2] Length = 280 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 115/272 (42%), Positives = 164/272 (60%), Gaps = 1/272 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLE+GV FGH+ WNPKM++YIF RN +I+DL QTV M + A I+D Sbjct: 1 MAYVTMRELLEAGVHFGHQTRRWNPKMKKYIFGARNGIYIVDLQQTVKMFRDAYDFITDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G +LFV TK QA D V E A R+ Y V ++WLGGM+TN++T+ ++I + L + Sbjct: 61 TAQGKSVLFVGTKKQARDSVYEEANRAETYYVQNRWLGGMLTNFQTIKKTISRFEFLSTI 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + + KKER+ + ++R KL+ + GI M LP +FV+D E +A++E +RL Sbjct: 121 ENDGTIEDYPKKERVKMAKERVKLEACIGGISKMKNLPGAIFVIDPKNESIAVKEGKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAVVDTN +PD +DYVIPGNDD+ RSI LF +A AAI+G R A + Sbjct: 181 IPIVAVVDTNCDPDDIDYVIPGNDDAIRSIRLFASKIADAAIEGHQRYLEKQNAGSDKDM 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVV 273 + ++ ES DG V ++ Sbjct: 241 DEAAFGGSAPVAAAVERTIESDGSDGPVVEMI 272 >gi|160903279|ref|YP_001568860.1| ribosomal protein S2 [Petrotoga mobilis SJ95] gi|189044948|sp|A9BGV6|RS2_PETMO RecName: Full=30S ribosomal protein S2 gi|160360923|gb|ABX32537.1| ribosomal protein S2 [Petrotoga mobilis SJ95] Length = 288 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 100/260 (38%), Positives = 161/260 (61%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+G FGHR WNPKM+ YIF R HIIDL +T+ + +A + ++ Sbjct: 1 MSVVSMKQLLEAGAHFGHRTRRWNPKMQPYIFTARKGIHIIDLQKTLKSIDEAYDFLKNS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 V R+LFV TK QA V + A+R ++ VN++WLGG++TN+KT+ I KL E Sbjct: 61 VMEKKRVLFVGTKKQAQQIVADEARRCGEFFVNNRWLGGLLTNFKTIKSRIDKLEQLTEY 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + ++E KKE+ I R +KL++ L G+R M +PD++F++D +E++A++EA L+ Sbjct: 121 VESEEFSKLPKKEQATIRRNLEKLEKNLGGLRGMKKIPDILFIIDPKKEEIAVKEANLLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A VDTN +PD++DYVIP NDD+ R+I L +A A I+G + + ++ Sbjct: 181 IPIIATVDTNCDPDVIDYVIPANDDAIRTIMLIVSKMADAIIEGKEGRIETLEESSEVEE 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 E + +++E ++ E Sbjct: 241 EEEEKDEVIDEVDEKLEAEE 260 >gi|237668205|ref|ZP_04528189.1| ribosomal protein S2 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237656553|gb|EEP54109.1| ribosomal protein S2 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 233 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 147/230 (63%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKAEEAYNFIKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA + + E A RS + VN++WLGGM+TN+ T+ I+KL D+E + Sbjct: 61 ATEGKDILFVGTKKQAQEAIQEEAIRSNMHFVNNRWLGGMLTNFTTIKSRIRKLEDIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++ + +KL++ L GIR++ MF+VD +EK AI EA+ L Sbjct: 121 QEDGTFEVLPKKEVIKLKGELEKLQKNLGGIRNLDASNVGAMFIVDPRKEKNAILEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 GIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIIEGRQGEQ 230 >gi|221066085|ref|ZP_03542190.1| ribosomal protein S2 [Comamonas testosteroni KF-1] gi|220711108|gb|EED66476.1| ribosomal protein S2 [Comamonas testosteroni KF-1] Length = 250 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 109/248 (43%), Positives = 162/248 (65%), Gaps = 1/248 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 3 VTMREMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG IL V TK QA + V E AKR+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 63 GGTILMVGTKRQARELVAEEAKRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEA 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + +KKE+L R+ +KL++ + GI+DM GLPD +FV+D K+AI EA++L IP++ Sbjct: 123 GLESMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPLI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI-ARQHSYMGADTKSAGETV 244 VVDTN NP+ +DYVIPGNDDS++++ L+ +A A ++G AR + + A G+ Sbjct: 183 GVVDTNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGREARLNDVVKAAAGENGDEF 242 Query: 245 VHSKEGMQ 252 V +E Sbjct: 243 VEVEESAA 250 >gi|145638266|ref|ZP_01793876.1| 30S ribosomal protein S2 [Haemophilus influenzae PittII] gi|145272595|gb|EDK12502.1| 30S ribosomal protein S2 [Haemophilus influenzae PittII] Length = 240 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 158/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAASEAVQVAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|262039417|ref|ZP_06012724.1| ribosomal protein S2 [Leptotrichia goodfellowii F0264] gi|261746553|gb|EEY34085.1| ribosomal protein S2 [Leptotrichia goodfellowii F0264] Length = 264 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 103/266 (38%), Positives = 170/266 (63%), Gaps = 4/266 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ +KA + + + Sbjct: 1 MAVITMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLAATEKAYEFVREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA D + E A+R+ + VN +WLGG++TN T+ +++L++LEE+ Sbjct: 61 SENGGKVLFVGTKKQAQDAIREEAERAGGFYVNHRWLGGLLTNLNTIKTRVKRLKELEEM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +TKKE + ++ KL + + GI++M LP +FVVD +E LA++EA++L Sbjct: 121 DADGTLDTAYTKKEAGLLRKEMAKLSKNIGGIKNMSKLPAALFVVDIKKEFLALEEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PDLV Y IP NDD+ RS+ LF ++A+AA++G + + Sbjct: 181 GIPVIALIDTNVDPDLVTYKIPANDDAIRSVKLFAQVIANAAVEGNGGVEG--FVEEEDG 238 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 E V+ + ++ E+++ + E + ++ Sbjct: 239 SEEVLQETDVVEFEDEAVTEEEAEIN 264 >gi|326794435|ref|YP_004312255.1| ribosomal protein S2 [Marinomonas mediterranea MMB-1] gi|326545199|gb|ADZ90419.1| ribosomal protein S2 [Marinomonas mediterranea MMB-1] Length = 244 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 110/252 (43%), Positives = 159/252 (63%), Gaps = 9/252 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R LL+ G FGH+ WNPKM+ +IF RN HII+L TVP L +AL ++ Sbjct: 1 MPTVSMRDLLQVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNEALALVKKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 ++LFV TK A+ + E A RS+ VN +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 TENKNKVLFVGTKRAAAKSIKEQAARSSMPYVNHRWLGGMLTNYKTIRASIKRLRDLENQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + TKKE L R+ +KL+ +L GI+DMGGLPD +FVVD + E++AI+EA +L Sbjct: 121 MNDGTFEKLTKKEALMRTRELEKLELSLGGIKDMGGLPDALFVVDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNSNPD +DYVIP NDD+ R++ L+ A AA++G A Sbjct: 181 IPVIGIVDTNSNPDGIDYVIPANDDAIRAVQLYVSAFADAALEGRAVAAGT--------A 232 Query: 242 ETVVHSKEGMQL 253 + V E + Sbjct: 233 DEFVEVNEATEA 244 >gi|119946597|ref|YP_944277.1| ribosomal protein S2 [Psychromonas ingrahamii 37] gi|166226744|sp|A1SYW3|RS2_PSYIN RecName: Full=30S ribosomal protein S2 gi|119865201|gb|ABM04678.1| SSU ribosomal protein S2P [Psychromonas ingrahamii 37] Length = 244 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 156/241 (64%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL + Sbjct: 1 MANVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNSALDFLEQK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G++LFV TK ASD V EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AAKKGKVLFVGTKRAASDAVKEAAISCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L + R+ +KL + L GI++MGG+PD++FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKVTKKEALMLARELEKLDKTLGGIKNMGGIPDVIFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++++VDTNS PD +DYV+PGNDD+ R+I L+ + A+ G + Sbjct: 181 IPVISIVDTNSCPDNIDYVVPGNDDAIRAIKLYLEAAATTIKAGREQDVIVQAEQDGFVE 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|34580930|ref|ZP_00142410.1| 30S ribosomal protein S2 [Rickettsia sibirica 246] gi|229586324|ref|YP_002844825.1| 30S ribosomal protein S2 [Rickettsia africae ESF-5] gi|259495223|sp|C3PMC2|RS2_RICAE RecName: Full=30S ribosomal protein S2 gi|28262315|gb|EAA25819.1| 30S ribosomal protein S2 [Rickettsia sibirica 246] gi|228021374|gb|ACP53082.1| 30S ribosomal protein S2 [Rickettsia africae ESF-5] Length = 295 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 134/271 (49%), Positives = 184/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE LN+ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETV---VHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 244 QEHTDKGLTSKNVSKLKQAKKFSKTKNIDEE 274 >gi|302339355|ref|YP_003804561.1| ribosomal protein S2 [Spirochaeta smaragdinae DSM 11293] gi|301636540|gb|ADK81967.1| ribosomal protein S2 [Spirochaeta smaragdinae DSM 11293] Length = 300 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 104/255 (40%), Positives = 165/255 (64%), Gaps = 15/255 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A ++ + Sbjct: 1 MSVVSMKSLLESGVHFGHQTKRWDPRMKKYIFAERNGIHIIDLQKTIVKIKEAYDMVREQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA + AKR + VN++WLGGM+TN+ T+ +SI +L+ +E++ Sbjct: 61 VKEGRSILFVGTKKQAQQAIESEAKRCGMFYVNNRWLGGMLTNFTTIKKSIHRLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + TKKE + ++R +L++ L GI++M LP +F++DT +E +A+ EARR+ Sbjct: 121 EVDGTFESLTKKEIAKLNKERSRLEKNLGGIKEMKDLPGAIFIIDTRKESIAVAEARRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+AVVDTN NPD+VD+ IPGNDD+ R+I LF +++ A ID + Sbjct: 181 IPIIAVVDTNCNPDVVDFPIPGNDDAIRAITLFTKVISDAVID--------------ADN 226 Query: 242 ETVVHSKEGMQLEED 256 E + + +Q EE+ Sbjct: 227 EIGIEIIDSLQDEEE 241 >gi|157827988|ref|YP_001494230.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932681|ref|YP_001649470.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Iowa] gi|166226749|sp|A8GQP7|RS2_RICRS RecName: Full=30S ribosomal protein S2 gi|189045001|sp|B0BW38|RS2_RICRO RecName: Full=30S ribosomal protein S2 gi|157800469|gb|ABV75722.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907768|gb|ABY72064.1| SSU ribosomal protein S2P [Rickettsia rickettsii str. Iowa] Length = 295 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 132/271 (48%), Positives = 184/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ +R++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGKRDDVHIIDLRQSVALMNVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETV---VHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 244 QEHTDKGLTSKNVSKLKQAKKFSKTKNIDEE 274 >gi|298529661|ref|ZP_07017064.1| ribosomal protein S2 [Desulfonatronospira thiodismutans ASO3-1] gi|298511097|gb|EFI35000.1| ribosomal protein S2 [Desulfonatronospira thiodismutans ASO3-1] Length = 264 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 113/260 (43%), Positives = 167/260 (64%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++Q+LE+GV FGH+ WNPKM+ YIF R HIIDL QTV + Q A ISDT Sbjct: 1 MSYVTMKQMLETGVHFGHQTKRWNPKMKPYIFGSRKGIHIIDLQQTVKLYQYAHDFISDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G ++LFV TK QA + + A+R+ + V ++WLGG +TN++T+ +SI++L+ LE + Sbjct: 61 VAGGKKVLFVGTKRQAREVINTEAQRADMFYVTNRWLGGTLTNFQTIRKSIERLKTLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F KKE ++R+ +KL L GI+DM LP F++D +E++AI+E R+L Sbjct: 121 FEDGSVHRFVKKEVAMMQREVNKLNADLGGIKDMDSLPGAAFIIDPKKEEIAIKECRKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI AVVDTN +PDL+D+VIPGNDD+ R+I LF +A A ++G+A++ + K+A Sbjct: 181 IPIAAVVDTNCDPDLIDFVIPGNDDAIRAIKLFAGSMADACLEGMAKRGDREQQEDKAAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 +KE E + E Sbjct: 241 AQEAEAKEMQTEPEPAMQEE 260 >gi|114562448|ref|YP_749961.1| 30S ribosomal protein S2 [Shewanella frigidimarina NCIMB 400] gi|122300317|sp|Q085E2|RS2_SHEFN RecName: Full=30S ribosomal protein S2 gi|114333741|gb|ABI71123.1| SSU ribosomal protein S2P [Shewanella frigidimarina NCIMB 400] Length = 242 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 159/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + + +A QY V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASKKGKVLFVGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ DKL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANAGRGQDLAVQAEQDGFVE 240 >gi|124516673|gb|EAY58181.1| ribosomal protein S2 [Leptospirillum rubarum] Length = 274 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 101/256 (39%), Positives = 155/256 (60%), Gaps = 2/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++++LE+GV FGH+ WNPKM+R+I+ ERN +I+DL QTV + A + Sbjct: 16 MIDVTLKEMLEAGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQTVRRFRVAREFAKSV 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA + + A+R Y V +WLGGM+TN +TV +S+++L +EE+ Sbjct: 76 VRNRGSILFVGTKRQAQPIIQQEAQRCGMYFVTERWLGGMLTNLQTVRKSVERLNKIEEM 135 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE +E++ +KL L+GIR + LP +FVVD +E +A+ EA RL Sbjct: 136 MESGQISRLPKKEVAQLEKEHEKLASILNGIRGLSHLPAAIFVVDPKKEHIAVHEANRLG 195 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +PD++ + IP NDD+ RSI L +A A +DG G + + Sbjct: 196 IPVIAMVDTNCDPDMIQFPIPSNDDAIRSIRLITAGIADAVLDGALESQVQKGREA-AVS 254 Query: 242 ETVVHSKEGMQLEEDS 257 E+ ++E E+ S Sbjct: 255 ESSGDTREEEDSEKKS 270 >gi|161510961|ref|YP_089125.2| 30S ribosomal protein S2 [Mannheimia succiniciproducens MBEL55E] gi|61215477|sp|Q65R70|RS2_MANSM RecName: Full=30S ribosomal protein S2 Length = 242 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 114/245 (46%), Positives = 161/245 (65%), Gaps = 4/245 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNGALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKILFVGTKRAATEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALVRTREMEKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD +D+VIPGNDD++R+I L+ A+A +G ++Q + + K A Sbjct: 181 IPVFAVVDTNSNPDGIDFVIPGNDDATRAIQLYVTAAAAAVKEGRSQQTAT---EEKFAE 237 Query: 242 ETVVH 246 E Sbjct: 238 EVAAE 242 >gi|54297628|ref|YP_123997.1| 30S ribosomal protein S2 [Legionella pneumophila str. Paris] gi|148359249|ref|YP_001250456.1| 30S ribosomal protein S2 [Legionella pneumophila str. Corby] gi|296107294|ref|YP_003618994.1| small subunit ribosomal protein S2 [Legionella pneumophila 2300/99 Alcoy] gi|61215407|sp|Q5X4J7|RS2_LEGPA RecName: Full=30S ribosomal protein S2 gi|166225281|sp|A5ICL0|RS2_LEGPC RecName: Full=30S ribosomal protein S2 gi|53751413|emb|CAH12831.1| 30S ribosomal protein S2 [Legionella pneumophila str. Paris] gi|148281022|gb|ABQ55110.1| 30S ribosomal protein S2 [Legionella pneumophila str. Corby] gi|295649195|gb|ADG25042.1| small subunit ribosomal protein S2 [Legionella pneumophila 2300/99 Alcoy] Length = 254 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 117/254 (46%), Positives = 160/254 (62%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S Sbjct: 1 MNNVSMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLNDVTNYVSRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A D + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ Sbjct: 61 AANKAKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLR Sbjct: 121 KEKGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLR 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG + Sbjct: 181 IPVIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDSEFV 240 Query: 242 ETVVHSKEGMQLEE 255 E +S E + E Sbjct: 241 EVTSNSNEEEKSGE 254 >gi|319786515|ref|YP_004145990.1| ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1] gi|317465027|gb|ADV26759.1| ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1] Length = 271 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 152/241 (63%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ Q A+ IS Sbjct: 1 MPQITMRQMLEAGVHFGHQTRYWNPKMGPYIFGARGKIHIINLEKTVPLFQDAMNFISGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G ILF+ TK A D + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARDAMKEEAERCGMPYMTQRWLGGTLTNFRTVKQSVSRLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+RDKL+ +L GI+DM LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDALFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +P+LVDY IPGNDD+ R++ L+ A A ++G A Sbjct: 181 IPVVAVVDTNYDPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPHAATVTESDFA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|253996537|ref|YP_003048601.1| 30S ribosomal protein S2 [Methylotenera mobilis JLW8] gi|253983216|gb|ACT48074.1| ribosomal protein S2 [Methylotenera mobilis JLW8] Length = 245 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 113/224 (50%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM +IF +RN HI++L +T+PM + AL+ + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPMFEDALKHVRTLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GRILFV TK QA D V E A R+ VN +WLGGM+TN+KTV QSI++L+D E +L Sbjct: 62 NKGRILFVGTKRQARDIVKEEATRAGCAYVNHRWLGGMLTNFKTVKQSIKRLQDFEVMLQ 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + F KKE L +R+ +KL+R++ GI++MGGLPD +F++D E AI EA +L IP Sbjct: 122 DGSLDKFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAITEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ VVDTN++PD V YVIPGNDDSSR+I L+ +A A ++G + Sbjct: 182 VIGVVDTNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEGRS 225 >gi|157964148|ref|YP_001498972.1| 30S ribosomal protein S2 [Rickettsia massiliae MTU5] gi|157843924|gb|ABV84425.1| 30S ribosomal protein S2 [Rickettsia massiliae MTU5] Length = 312 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 133/271 (49%), Positives = 185/271 (68%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 21 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 80 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 81 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 140 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 141 LENEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 200 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 201 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 260 Query: 241 GE---TVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 261 QEHTDKALTSKNVSKLKQAKKFSKTKNIDEE 291 >gi|84394414|ref|ZP_00993131.1| 30S ribosomal protein S2 [Vibrio splendidus 12B01] gi|84374947|gb|EAP91877.1| 30S ribosomal protein S2 [Vibrio splendidus 12B01] Length = 244 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 109/237 (45%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF R+ HII+L +TVPM +AL I+ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARSKVHIINLEKTVPMFNEALAEIAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L Sbjct: 121 AQDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP+ AVVDTNSNPD +D++IPGNDD+ R++ L+ + A A +G + A K Sbjct: 181 IPVYAVVDTNSNPDGIDFIIPGNDDAIRAVQLYLNAAADAVKEGRNKDVVIAAAAEK 237 >gi|24373197|ref|NP_717240.1| 30S ribosomal protein S2 [Shewanella oneidensis MR-1] gi|113970976|ref|YP_734769.1| 30S ribosomal protein S2 [Shewanella sp. MR-4] gi|114048200|ref|YP_738750.1| 30S ribosomal protein S2 [Shewanella sp. MR-7] gi|117921256|ref|YP_870448.1| 30S ribosomal protein S2 [Shewanella sp. ANA-3] gi|38258373|sp|Q8EGH5|RS2_SHEON RecName: Full=30S ribosomal protein S2 gi|122944527|sp|Q0HT62|RS2_SHESR RecName: Full=30S ribosomal protein S2 gi|123130243|sp|Q0HGV5|RS2_SHESM RecName: Full=30S ribosomal protein S2 gi|166226755|sp|A0KZ23|RS2_SHESA RecName: Full=30S ribosomal protein S2 gi|24347418|gb|AAN54684.1|AE015609_3 ribosomal protein S2 [Shewanella oneidensis MR-1] gi|113885660|gb|ABI39712.1| SSU ribosomal protein S2P [Shewanella sp. MR-4] gi|113889642|gb|ABI43693.1| SSU ribosomal protein S2P [Shewanella sp. MR-7] gi|117613588|gb|ABK49042.1| SSU ribosomal protein S2P [Shewanella sp. ANA-3] Length = 242 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASKKGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAANAGRGQDLAVQAEQDGFVE 240 >gi|157736793|ref|YP_001489476.1| 30S ribosomal protein S2 [Arcobacter butzleri RM4018] gi|315635973|ref|ZP_07891234.1| 30S ribosomal protein S2 [Arcobacter butzleri JV22] gi|167011232|sp|A8ES83|RS2_ARCB4 RecName: Full=30S ribosomal protein S2 gi|157698647|gb|ABV66807.1| 30S ribosomal protein S2 [Arcobacter butzleri RM4018] gi|315479757|gb|EFU70429.1| 30S ribosomal protein S2 [Arcobacter butzleri JV22] Length = 265 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 114/274 (41%), Positives = 166/274 (60%), Gaps = 12/274 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+++IF R N +IIDL +T+ + V+ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIYIIDLQKTLRYFRYTYNVVRDRAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++FV TK QAS+ + +AA VN +WLGGM+TN+ T+ +SI+KL ++++ + Sbjct: 62 GQTMIFVGTKKQASETIKKAAISCGMPYVNHRWLGGMLTNFGTIKKSIRKLEIIKKMREE 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 TKKE L + RK +KL+ L GI++M LPD+MFV+D +EK+AIQEARRL I + Sbjct: 122 GQLDLLTKKEALMLTRKEEKLELYLGGIKEMNKLPDMMFVLDAVKEKIAIQEARRLGITV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VD IPGNDD+ RSI LFC+ +A+A +G A G + Sbjct: 182 VAPLDTNCDPDVVDLPIPGNDDAIRSIHLFCNEMAAAMNEGKAALADETGVEV------- 234 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E + EE + +V +G+E E + Sbjct: 235 ----EPISAEEKEELIAEAVAEGEEFNFAEEGEN 264 >gi|30249680|ref|NP_841750.1| 30S ribosomal protein S2 [Nitrosomonas europaea ATCC 19718] gi|61215747|sp|Q82TZ6|RS2_NITEU RecName: Full=30S ribosomal protein S2 gi|30180717|emb|CAD85629.1| Ribosomal protein S2 [Nitrosomonas europaea ATCC 19718] Length = 251 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 114/248 (45%), Positives = 160/248 (64%), Gaps = 1/248 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM YIF +RN HI++L T+ ML++AL A Sbjct: 2 SVTMRQMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMLREALDYARRLTA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 G ILFV TK QA D VME A R VN +WLGGM+TN+KT+ QSI++L+D+E+++ Sbjct: 62 NKGTILFVGTKRQARDIVMEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQ 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKE L+ +R+ +KL +L GI++M GLPD MFV+D +K AI EA +L IP Sbjct: 122 DGTLNKLTKKEALDFQRELEKLNNSLGGIKEMKGLPDAMFVIDVGYQKGAIVEADKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +V VVDTN +P V YV+PGNDDSS++I L+ +A A ++G + + +KS E Sbjct: 182 VVGVVDTNHSPAGVRYVVPGNDDSSQAIRLYARAMADAILEGRNQSVQEIIEMSKSDDEI 241 Query: 244 VVHSKEGM 251 + + Sbjct: 242 MSGRDQSA 249 >gi|182685151|ref|YP_001836898.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CGSP14] gi|182630485|gb|ACB91433.1| 30S ribosomal protein S2 [Streptococcus pneumoniae CGSP14] Length = 275 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 17 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 76 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 77 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 136 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 137 EEDGTFEVLPKKEVALLNKQRTRLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 197 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAVEAEFAAS 256 Query: 242 ETVVHSKEGM 251 ET S E + Sbjct: 257 ETQADSIEEI 266 >gi|86152737|ref|ZP_01070942.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843622|gb|EAQ60832.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 263 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 111/264 (42%), Positives = 164/264 (62%), Gaps = 9/264 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE L + RK++KL L GIR M D++FV+DT +EK+A+QEA RLRIP+ Sbjct: 122 GSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQHDMIFVIDTVKEKIAVQEANRLRIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLV Y IPGNDD+ RS+ LFC +A A +G A + + GE + Sbjct: 182 VAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALR--------EQDGEAL 233 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 + ++ + EE + + ++ + Sbjct: 234 ANEEKEITDEEKKEVLDEAMSEED 257 >gi|91206097|ref|YP_538452.1| 30S ribosomal protein S2 [Rickettsia bellii RML369-C] gi|157826470|ref|YP_001495534.1| 30S ribosomal protein S2 [Rickettsia bellii OSU 85-389] gi|123388083|sp|Q1RH01|RS2_RICBR RecName: Full=30S ribosomal protein S2 gi|166226747|sp|A8GUK1|RS2_RICB8 RecName: Full=30S ribosomal protein S2 gi|91069641|gb|ABE05363.1| 30S ribosomal protein S2 [Rickettsia bellii RML369-C] gi|157801774|gb|ABV78497.1| 30S ribosomal protein S2 [Rickettsia bellii OSU 85-389] Length = 291 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 131/281 (46%), Positives = 183/281 (65%), Gaps = 5/281 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++ LL++GV FGH+ WNPKM YI+ ER+ HIIDL QT ++ AL I +T Sbjct: 4 IPPVNVKDLLDAGVHFGHKTSRWNPKMAPYIYGERDEVHIIDLRQTAALMNVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G++LFV+TK QASD + E A++ QY VN +WLGGM+TNWKT+S SI+KL LE+ Sbjct: 64 VKNDGKVLFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTISGSIEKLNKLEQT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ ++DTN+E +AI EA RL Sbjct: 124 LENEEACIGYTKKEILDMNRKKDKLLLSLAGIRELHSKPDLIVIIDTNKEHIAISEAVRL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVAVVDTNSNPD +DY IPGNDD+ RSI +C L A AA+ G+ G D S Sbjct: 184 DIPIVAVVDTNSNPDHIDYPIPGNDDAIRSIRFYCSLFADAALQGLEESMKASGVDLGSI 243 Query: 241 ---GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 G+ + K +L++ + S++ ++ + + +S Sbjct: 244 QEHGDKNLAPKNVSKLKQAKKFSKTKNINEEANTEFEQALS 284 >gi|83654618|gb|ABC38681.1| ribosomal protein S2 [Burkholderia thailandensis E264] Length = 304 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 61 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAAN 120 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 121 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 180 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 181 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 240 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 241 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAVRGDDEYV 300 Query: 245 VH 246 Sbjct: 301 EE 302 >gi|160900380|ref|YP_001565962.1| 30S ribosomal protein S2 [Delftia acidovorans SPH-1] gi|238687161|sp|A9BMN2|RS2_DELAS RecName: Full=30S ribosomal protein S2 gi|160365964|gb|ABX37577.1| ribosomal protein S2 [Delftia acidovorans SPH-1] Length = 250 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 102/249 (40%), Positives = 160/249 (64%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q A + + + Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAQKFVKQLAS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG IL V TK QA + V A+R+ V+ +WLGGM+TN+KTV SI++L++++ Sbjct: 62 NGGTILMVGTKRQAREMVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP+ Sbjct: 122 AGLEAMSKKEQLMFVRELEKLEKDIGGIQDMNSLPDAIFVIDVGFHKIAVAEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 V VVD+N NP+ +DYVIPGNDDS++++ L+ +A A ++G A + A + +G+ Sbjct: 182 VGVVDSNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGRAAALTDVVKAASGESGDE 241 Query: 244 VVHSKEGMQ 252 V +E Sbjct: 242 FVEVEESAA 250 >gi|154148854|ref|YP_001406404.1| 30S ribosomal protein S2 [Campylobacter hominis ATCC BAA-381] gi|166225255|sp|A7I1L3|RS2_CAMHC RecName: Full=30S ribosomal protein S2 gi|153804863|gb|ABS51870.1| ribosomal protein S2 [Campylobacter hominis ATCC BAA-381] Length = 267 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 105/257 (40%), Positives = 162/257 (63%), Gaps = 1/257 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R LLE GV FGH+ WNPKM+++IF ER +IIDL +T+ + ++ D A Sbjct: 2 VTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G ILFV TK QA + E A++ VN +WLGGM+TN+ T+ QSI+KL +E++ + Sbjct: 62 GKTILFVGTKKQAGAAIKEFAEKCEMPYVNHRWLGGMLTNFDTIKQSIRKLEVIEQMETD 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 TKKE ++ K+ KL+ L GIR+M LPD++FV+D +EK+A++EA RL +P+ Sbjct: 122 GSMDLLTKKEAGMLKSKKAKLELYLGGIRNMKNLPDMVFVIDCVKEKIAVKEANRLGMPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A +DTN +PD+VD+ IPGNDD+ RSI LFC ++ A +G A + + ++ + Sbjct: 182 IAPLDTNCDPDVVDFPIPGNDDAIRSIQLFCQEMSEAINEGKALRDQDSEEEIQNKEQDE 241 Query: 245 VHSKEGMQLEEDSQSSE 261 V +E + +++ + E Sbjct: 242 VSQEEKDDILDEAMNEE 258 >gi|157803269|ref|YP_001491818.1| 30S ribosomal protein S2 [Rickettsia canadensis str. McKiel] gi|166226748|sp|A8EXF0|RS2_RICCK RecName: Full=30S ribosomal protein S2 gi|157784532|gb|ABV73033.1| 30S ribosomal protein S2 [Rickettsia canadensis str. McKiel] Length = 295 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 134/271 (49%), Positives = 184/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMGSYIYGERDDVHIIDLRQSAVLMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LGNEEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+A G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLAESMKASGVDMGAI 243 Query: 241 GE---TVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S+ +D + Sbjct: 244 QEHTDKALTSKSVSKLKQTKKFSKMKNIDEE 274 >gi|170723243|ref|YP_001750931.1| 30S ribosomal protein S2 [Pseudomonas putida W619] gi|229470519|sp|B1JBR0|RS2_PSEPW RecName: Full=30S ribosomal protein S2 gi|169761246|gb|ACA74562.1| ribosomal protein S2 [Pseudomonas putida W619] Length = 245 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +I+FV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKIMFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRGR 225 >gi|120599552|ref|YP_964126.1| 30S ribosomal protein S2 [Shewanella sp. W3-18-1] gi|146292451|ref|YP_001182875.1| 30S ribosomal protein S2 [Shewanella putrefaciens CN-32] gi|166226754|sp|A4Y543|RS2_SHEPC RecName: Full=30S ribosomal protein S2 gi|166226756|sp|A1RLM7|RS2_SHESW RecName: Full=30S ribosomal protein S2 gi|120559645|gb|ABM25572.1| SSU ribosomal protein S2P [Shewanella sp. W3-18-1] gi|145564141|gb|ABP75076.1| SSU ribosomal protein S2P [Shewanella putrefaciens CN-32] gi|319425753|gb|ADV53827.1| ribosomal protein S2 [Shewanella putrefaciens 200] Length = 242 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 160/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASKKGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS PD V+Y++PGNDD+ R+I L+ VA+AA G + + Sbjct: 181 IPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAAKAGRGQDLAVQAEQDGFVE 240 >gi|324012182|gb|EGB81401.1| ribosomal protein S2 [Escherichia coli MS 60-1] Length = 223 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 108/216 (50%), Positives = 151/216 (69%), Gaps = 1/216 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGA 216 >gi|254507883|ref|ZP_05120013.1| ribosomal protein S2 [Vibrio parahaemolyticus 16] gi|219549256|gb|EED26251.1| ribosomal protein S2 [Vibrio parahaemolyticus 16] Length = 242 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 112/234 (47%), Positives = 162/234 (69%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L+DLE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G + + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAAASVTEGRNKDVAVVAE 234 >gi|18310682|ref|NP_562616.1| 30S ribosomal protein S2 [Clostridium perfringens str. 13] gi|110800337|ref|YP_696387.1| 30S ribosomal protein S2 [Clostridium perfringens ATCC 13124] gi|110803157|ref|YP_698987.1| 30S ribosomal protein S2 [Clostridium perfringens SM101] gi|168215350|ref|ZP_02640975.1| ribosomal protein S2 [Clostridium perfringens CPE str. F4969] gi|168216987|ref|ZP_02642612.1| ribosomal protein S2 [Clostridium perfringens NCTC 8239] gi|169342723|ref|ZP_02863764.1| ribosomal protein S2 [Clostridium perfringens C str. JGS1495] gi|25009207|sp|Q8XJQ6|RS2_CLOPE RecName: Full=30S ribosomal protein S2 gi|123146052|sp|Q0SSC0|RS2_CLOPS RecName: Full=30S ribosomal protein S2 gi|123344669|sp|Q0TPQ3|RS2_CLOP1 RecName: Full=30S ribosomal protein S2 gi|18145363|dbj|BAB81406.1| 30S ribosomal protein S2 [Clostridium perfringens str. 13] gi|110674984|gb|ABG83971.1| 30S ribosomal protein S2 [Clostridium perfringens ATCC 13124] gi|110683658|gb|ABG87028.1| 30S ribosomal protein S2 [Clostridium perfringens SM101] gi|169299229|gb|EDS81299.1| ribosomal protein S2 [Clostridium perfringens C str. JGS1495] gi|170713264|gb|EDT25446.1| ribosomal protein S2 [Clostridium perfringens CPE str. F4969] gi|182380953|gb|EDT78432.1| ribosomal protein S2 [Clostridium perfringens NCTC 8239] Length = 233 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 102/230 (44%), Positives = 146/230 (63%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKAEEAYNFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++FV TK QA + V E A+RS Y VN +WLGGM+TN+ T+ I +L L+E+ Sbjct: 61 SEAGKDVIFVGTKKQAQEAVKEEAERSNMYFVNHRWLGGMLTNFTTIKTRINRLNKLDEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 + KKE + ++ +R+KL+R L GI+++ MFVVD +EK AI EA+ L Sbjct: 121 EQDGTFDVLPKKEVIKLKLEREKLQRNLGGIKELDASNIGAMFVVDPRKEKNAIAEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 GIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLIAGKMADAIIEGRQGEQ 230 >gi|114332001|ref|YP_748223.1| 30S ribosomal protein S2 [Nitrosomonas eutropha C91] gi|122313295|sp|Q0AEH4|RS2_NITEC RecName: Full=30S ribosomal protein S2 gi|114309015|gb|ABI60258.1| SSU ribosomal protein S2P [Nitrosomonas eutropha C91] Length = 251 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 109/241 (45%), Positives = 152/241 (63%), Gaps = 1/241 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM YIF +RN HI++L T+ M + AL A Sbjct: 2 SVTMRQMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMFRDALDYARRLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 ILFV TK QA D V E A R VN +WLGGM+TN+KT+ QSI++L+D+E+++ Sbjct: 62 NKETILFVGTKRQARDIVKEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQ 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE L+ +R+ +KL +L GI++M GLPD MFV+D +K I EA +L IP Sbjct: 122 DGTLNKLVKKEALDFQRELEKLNASLGGIKEMKGLPDAMFVIDVGYQKGTIIEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +V VVDTN NP + YVIPGNDDSS++I L+ +A A ++G + + K+ E Sbjct: 182 VVGVVDTNHNPAGIQYVIPGNDDSSQAIRLYARAMADAILEGRNQAIQEIVEIGKTDSEV 241 Query: 244 V 244 + Sbjct: 242 L 242 >gi|161723250|ref|YP_095741.2| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|61215426|sp|Q5ZUS8|RS2_LEGPH RecName: Full=30S ribosomal protein S2 Length = 254 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 117/254 (46%), Positives = 160/254 (62%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S Sbjct: 1 MNNVSMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A D + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ Sbjct: 61 AANKAKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLR Sbjct: 121 KEKGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLR 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG + Sbjct: 181 IPVIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDSEFV 240 Query: 242 ETVVHSKEGMQLEE 255 E +S E + E Sbjct: 241 EVTSNSNEEEKSGE 254 >gi|161486610|ref|NP_935350.2| 30S ribosomal protein S2 [Vibrio vulnificus YJ016] gi|161501817|ref|NP_760735.2| 30S ribosomal protein S2 [Vibrio vulnificus CMCP6] gi|320155592|ref|YP_004187971.1| 30S ribosomal protein S2p (SAe) [Vibrio vulnificus MO6-24/O] gi|31340388|sp|Q8DBG1|RS2_VIBVU RecName: Full=30S ribosomal protein S2 gi|56749445|sp|Q7MIG0|RS2_VIBVY RecName: Full=30S ribosomal protein S2 gi|319930904|gb|ADV85768.1| SSU ribosomal protein S2p (SAe) [Vibrio vulnificus MO6-24/O] gi|319999275|gb|AAO10262.2| ribosomal protein S2 [Vibrio vulnificus CMCP6] Length = 242 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELVKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++LE + Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEVQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + AS+ +G + + + Sbjct: 181 IPVFAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASSLTEGRNKDVAAVAEKDGFVE 240 >gi|322386606|ref|ZP_08060231.1| 30S ribosomal protein S2 [Streptococcus cristatus ATCC 51100] gi|321269279|gb|EFX52214.1| 30S ribosomal protein S2 [Streptococcus cristatus ATCC 51100] Length = 260 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 101/251 (40%), Positives = 164/251 (65%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V E A+R+ QY +N +WLGG +TNW T+ + + +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVKEEAERAGQYYINHRWLGGTLTNWTTIQKRVARLKEIKRM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M++VD ++E++A++EA++L Sbjct: 121 EEEGIFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYIVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SA 240 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMADAVIEGRQGEDAVATVEAEFAA 240 Query: 241 GETVVHSKEGM 251 ET S E + Sbjct: 241 TETQADSIEEI 251 >gi|308270376|emb|CBX26988.1| 30S ribosomal protein S2 [uncultured Desulfobacterium sp.] Length = 288 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 119/273 (43%), Positives = 170/273 (62%), Gaps = 2/273 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM++YIF RN +IIDL +TV M + A I DT Sbjct: 1 MSYLTMKELLEAGVHFGHQTKRWNPKMKQYIFGARNGIYIIDLQKTVRMFKSAYDFIQDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R + V+++WLGGM+TN++T+ Q I +L L + Sbjct: 61 VANGKSVLFVGTKKQAKEAIYEEANRCEMFYVHNRWLGGMLTNFQTIKQGIDRLNYLNSI 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + F KKERL E++R KL L GIR M LP +F+VD E +AI+E +RLR Sbjct: 121 QNDGSINLFPKKERLKHEKERKKLDSTLGGIRIMNALPGAIFIVDPKHEAIAIREGKRLR 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT-KSA 240 IPIV++VDTN +PD VDY+IPGNDD+ RSI L +A+A I+G R A++ K Sbjct: 181 IPIVSIVDTNCDPDDVDYIIPGNDDAIRSIRLISSRIATACIEGKKRLEEKKQAESDKDV 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVV 273 E + + +L+ + S+ DG + ++ Sbjct: 241 EEVIETEEVASELKPGERKVISNGSDGPVIEII 273 >gi|294649929|ref|ZP_06727321.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194] gi|292824158|gb|EFF82969.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194] Length = 282 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 158/240 (65%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 33 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 92 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 93 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 152 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 153 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 212 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 213 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 272 >gi|261211378|ref|ZP_05925666.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC341] gi|262404595|ref|ZP_06081150.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC586] gi|260839333|gb|EEX65959.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC341] gi|262349627|gb|EEY98765.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC586] Length = 241 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 162/241 (67%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 1 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A++ +G + D Sbjct: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAASINEGRNKDAVVAEKDGFVEA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|183221976|ref|YP_001839972.1| 30S ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912044|ref|YP_001963599.1| 30S ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776720|gb|ABZ95021.1| 30S Ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780398|gb|ABZ98696.1| 30S ribosomal protein S2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 300 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 98/258 (37%), Positives = 163/258 (63%), Gaps = 3/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM Y++ RN HIIDL +TV ++A + Sbjct: 1 MSVISMKSLLEAGVHFGHQTRRWNPKMSPYVYTARNGIHIIDLQKTVQKTKEAYDALKKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G ++LFV TK QA + AA+ + Y V+++WLGG++TNW TV +SI +L+ LE++ Sbjct: 61 TGQGKKVLFVGTKKQARGAIERAAQACSMYYVSNRWLGGLLTNWNTVKKSIARLKRLEQM 120 Query: 123 LNK---ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + TKKE L+++R+ +KL++ L GI+DM +P+++FV+D +E++A++EA++ Sbjct: 121 EENNSFEQEARTKKEALSLKRELEKLRQTLGGIKDMAVVPEILFVIDPKKEEIAVKEAKK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L + + AV+DTN +P+ +DY IPGNDD+ R+I+LF D +A+A ++G + Sbjct: 181 LGLKVFAVIDTNCDPEPIDYPIPGNDDAIRAISLFLDTMANAVLEGTGGEVIQTNFAEDM 240 Query: 240 AGETVVHSKEGMQLEEDS 257 E + +G E Sbjct: 241 DAEQLALEYQGEYDESGK 258 >gi|332654217|ref|ZP_08419961.1| ribosomal protein S2 [Ruminococcaceae bacterium D16] gi|332517303|gb|EGJ46908.1| ribosomal protein S2 [Ruminococcaceae bacterium D16] Length = 240 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 100/240 (41%), Positives = 150/240 (62%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL +TV L++A + + Sbjct: 1 MAVVSMKQLLEAGVHFGHQTRRWNPKMATYIYTERNGIYIIDLQKTVKKLEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +LFV TK QA + + E A R Y VN++WLGGM+TN+KT+ + +L L+++ Sbjct: 61 GEKGETLLFVGTKKQAQEAIKEEASRVGMYWVNARWLGGMLTNFKTMRGRVDRLNQLKKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + KL++ L G+ +M LP +FVVD +E+ AI EAR+L Sbjct: 121 QEDGTFDMLPKKEVMKHLGEIAKLEKYLGGVTEMKKLPGALFVVDPRKERNAINEARKLH 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +PD +DYVIPGNDD+ R+I L ++A+A +G + ++A Sbjct: 181 IPIVAIVDTNCDPDEIDYVIPGNDDAIRAIKLISSVMANAIQEGKQGKDEAPVETAETAE 240 >gi|17546123|ref|NP_519525.1| 30S ribosomal protein S2 [Ralstonia solanacearum GMI1000] gi|25009208|sp|Q8XZJ1|RS2_RALSO RecName: Full=30S ribosomal protein S2 gi|17428419|emb|CAD15106.1| probable 30s ribosomal protein s2 [Ralstonia solanacearum GMI1000] Length = 247 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 111/247 (44%), Positives = 163/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ +KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALESMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + G+ Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGGDD 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|90994440|ref|YP_536930.1| ribosomal protein S2 [Porphyra yezoensis] gi|122232143|sp|Q1XDN8|RR2_PORYE RecName: Full=30S ribosomal protein S2, chloroplastic gi|90819004|dbj|BAE92373.1| 30S ribosomal protein S2 [Porphyra yezoensis] Length = 242 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 101/241 (41%), Positives = 144/241 (59%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +LLE+GV FGH+ WNPKM YI+ ERN HIIDL QT +L +A ++I Sbjct: 1 MAIVTLAELLEAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTAQLLTEACELIKQA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LF+ TK QA+ V + A+R Y VN +WLGGM+TNW T+ + +LR LEE Sbjct: 61 SSDGKKVLFLGTKRQAAGIVAQEAQRCDSYYVNQRWLGGMLTNWVTIKSRVSRLRQLEEQ 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ DKL++ L+GI++M LPD++ VVD RE AIQE +L Sbjct: 121 DKSGMIDQLPKKEAAVLRRELDKLRKHLNGIKNMTRLPDIVVVVDQKRETTAIQECLKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP + ++DTN +P++++ IP NDD+ RSI L +A A DG Q + Sbjct: 181 IPTICILDTNCSPEIINIPIPANDDAIRSIKLIVGKIADAIYDGKYGQTDLEEITHPTQS 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|300691604|ref|YP_003752599.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum PSI07] gi|299078664|emb|CBJ51322.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum PSI07] Length = 247 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 111/247 (44%), Positives = 161/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALDTMSKKEALMFEREMAKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + G+ Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQDV-VEATRDGDD 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|269837762|ref|YP_003319990.1| 30S ribosomal protein S2 [Sphaerobacter thermophilus DSM 20745] gi|269787025|gb|ACZ39168.1| ribosomal protein S2 [Sphaerobacter thermophilus DSM 20745] Length = 269 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 110/228 (48%), Positives = 148/228 (64%), Gaps = 1/228 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM YIF ER+ HIIDL QTV +L +A D ARGG Sbjct: 1 MKALLEAGVHFGHQTKRWNPKMRPYIFTERHGIHIIDLQQTVRLLAEAQDFARDLAARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 R++FV TK QA + V AA+RS + VN +WLGG +TN+ T+ ++ L++LE E Sbjct: 61 RVIFVGTKKQAQEAVKNAAERSGMFYVNRRWLGGTLTNFVTIRSRLRYLKELERQAAAGE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K+E + R+ +KL++ L G+RDM LP +FVVD RE +A+ EARRL IPI+A Sbjct: 121 LDTLPKQEGIRKRRELEKLRQTLGGMRDMTQLPAAIFVVDPKRESIAVAEARRLGIPIIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VDTN +PDL+DYVIP NDD+ RS+ L +A A I+G S M Sbjct: 181 MVDTNCDPDLIDYVIPANDDAIRSVRLITSRIADALIEGRTELESTMA 228 >gi|289549251|ref|YP_003474239.1| ribosomal protein S2 [Thermocrinis albus DSM 14484] gi|289182868|gb|ADC90112.1| ribosomal protein S2 [Thermocrinis albus DSM 14484] Length = 278 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 108/268 (40%), Positives = 174/268 (64%), Gaps = 5/268 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R+LLE+GV FGH WNPKM +++ R++ HIIDL++T+ L++A ++D+ Sbjct: 1 MAVVSMRELLEAGVHFGHTKSRWNPKMAPFLYGVRHDIHIIDLNKTLVYLEQAYHFVADS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARG +LFV TK QA D + E A+R+ + +N +W+GG++TN++TV +SI KL+ LE + Sbjct: 61 VARGAEVLFVGTKKQAKDVIKEEAERAGVHYINERWVGGLLTNFRTVRKSILKLKTLERM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE ++RK ++L++ GI +M LPD+++VVDT RE +A+QEAR+L Sbjct: 121 EAEGVFDVLPKKEVRALKRKMERLRKLYGGIVNMTRLPDIIWVVDTVREHIAVQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 I +VA++D+N +PDLVDY +PGNDD+ +SI L +A A I+G R+ S + A Sbjct: 181 ITVVAILDSNCDPDLVDYPVPGNDDAIKSIKLLTSKIADAIIEGKTRRESLG----EEAA 236 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 V K + +EE+ ++ ++ E Sbjct: 237 TMEVVRKRVITVEEEERALFEKAMEMSE 264 >gi|299067459|emb|CBJ38658.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum CMR15] Length = 247 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 111/247 (44%), Positives = 163/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ V+S+WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMETAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ +KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALESMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + G+ Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGGDD 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|285018791|ref|YP_003376502.1| 30s ribosomal protein s2 [Xanthomonas albilineans GPE PC73] gi|283474009|emb|CBA16510.1| probable 30s ribosomal protein s2 [Xanthomonas albilineans] Length = 265 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 111/265 (41%), Positives = 162/265 (61%), Gaps = 6/265 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ W+PKM +YIF R HII+L +TVP+ A+ IS Sbjct: 1 MPQVTMRQMLEAGVHFGHQCRYWHPKMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G ILF+ TK A D V E A+R Q + +WLGG +TN++T+ QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARDAVKEEAERCGQPFMTQRWLGGTLTNFRTIKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K E L + R+RDKL+ +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFDKLVKHEVLTMRRERDKLEASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A + Sbjct: 181 IPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPHAASVREEEFA 240 Query: 242 ETV-----VHSKEGMQLEEDSQSSE 261 E K G + EE + ++E Sbjct: 241 EASDDKGRSPRKNGKKAEETASAAE 265 >gi|37199490|dbj|BAC95321.1| ribosomal protein S2 [Vibrio vulnificus YJ016] Length = 253 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 112/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL + Sbjct: 12 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELVKV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++LE + Sbjct: 72 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEVQ 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 132 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + AS+ +G + + + Sbjct: 192 IPVFAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASSLTEGRNKDVAAVAEKDGFVE 251 >gi|53719768|ref|YP_108754.1| 30S ribosomal protein S2 [Burkholderia pseudomallei K96243] gi|53723739|ref|YP_103195.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 23344] gi|67641710|ref|ZP_00440479.1| 30S ribosomal protein S2 [Burkholderia mallei GB8 horse 4] gi|76808700|ref|YP_333975.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710b] gi|121598729|ref|YP_993372.1| 30S ribosomal protein S2 [Burkholderia mallei SAVP1] gi|124386642|ref|YP_001029191.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10229] gi|126439256|ref|YP_001059469.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 668] gi|126448724|ref|YP_001080879.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10247] gi|126454332|ref|YP_001066752.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106a] gi|134277198|ref|ZP_01763913.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 305] gi|167000550|ref|ZP_02266361.1| 30S ribosomal protein S2 [Burkholderia mallei PRL-20] gi|167720166|ref|ZP_02403402.1| 30S ribosomal protein S2 [Burkholderia pseudomallei DM98] gi|167739171|ref|ZP_02411945.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 14] gi|167816382|ref|ZP_02448062.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 91] gi|167824760|ref|ZP_02456231.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 9] gi|167846292|ref|ZP_02471800.1| 30S ribosomal protein S2 [Burkholderia pseudomallei B7210] gi|167894874|ref|ZP_02482276.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 7894] gi|167903263|ref|ZP_02490468.1| 30S ribosomal protein S2 [Burkholderia pseudomallei NCTC 13177] gi|167911504|ref|ZP_02498595.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 112] gi|167919513|ref|ZP_02506604.1| 30S ribosomal protein S2 [Burkholderia pseudomallei BCC215] gi|217421460|ref|ZP_03452964.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 576] gi|226200131|ref|ZP_03795677.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pakistan 9] gi|237812808|ref|YP_002897259.1| ribosomal protein S2 [Burkholderia pseudomallei MSHR346] gi|242316914|ref|ZP_04815930.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106b] gi|254178385|ref|ZP_04885040.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 10399] gi|254179321|ref|ZP_04885920.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1655] gi|254189293|ref|ZP_04895804.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pasteur 52237] gi|254197600|ref|ZP_04904022.1| 30S ribosomal protein S2 [Burkholderia pseudomallei S13] gi|254200147|ref|ZP_04906513.1| 30S ribosomal protein S2 [Burkholderia mallei FMH] gi|254206485|ref|ZP_04912837.1| 30S ribosomal protein S2 [Burkholderia mallei JHU] gi|254261636|ref|ZP_04952690.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710a] gi|254297205|ref|ZP_04964658.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 406e] gi|254358106|ref|ZP_04974379.1| 30S ribosomal protein S2 [Burkholderia mallei 2002721280] gi|61215451|sp|Q62JC4|RS2_BURMA RecName: Full=30S ribosomal protein S2 gi|61215464|sp|Q63T12|RS2_BURPS RecName: Full=30S ribosomal protein S2 gi|123598728|sp|Q3JR28|RS2_BURP1 RecName: Full=30S ribosomal protein S2 gi|166225246|sp|A3MKU3|RS2_BURM7 RecName: Full=30S ribosomal protein S2 gi|166225247|sp|A2SB72|RS2_BURM9 RecName: Full=30S ribosomal protein S2 gi|166225248|sp|A1V569|RS2_BURMS RecName: Full=30S ribosomal protein S2 gi|166225249|sp|A3NWN1|RS2_BURP0 RecName: Full=30S ribosomal protein S2 gi|166225250|sp|A3NAU8|RS2_BURP6 RecName: Full=30S ribosomal protein S2 gi|52210182|emb|CAH36161.1| 30S ribosomal protein S2 [Burkholderia pseudomallei K96243] gi|52427162|gb|AAU47755.1| ribosomal protein S2 [Burkholderia mallei ATCC 23344] gi|76578153|gb|ABA47628.1| ribosomal protein S2 [Burkholderia pseudomallei 1710b] gi|121227539|gb|ABM50057.1| 30S ribosomal protein S2 [Burkholderia mallei SAVP1] gi|124294662|gb|ABN03931.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10229] gi|126218749|gb|ABN82255.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 668] gi|126227974|gb|ABN91514.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106a] gi|126241594|gb|ABO04687.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10247] gi|134250848|gb|EBA50927.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 305] gi|147749743|gb|EDK56817.1| 30S ribosomal protein S2 [Burkholderia mallei FMH] gi|147753928|gb|EDK60993.1| 30S ribosomal protein S2 [Burkholderia mallei JHU] gi|148027233|gb|EDK85254.1| 30S ribosomal protein S2 [Burkholderia mallei 2002721280] gi|157807778|gb|EDO84948.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 406e] gi|157936972|gb|EDO92642.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pasteur 52237] gi|160699424|gb|EDP89394.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 10399] gi|169654341|gb|EDS87034.1| 30S ribosomal protein S2 [Burkholderia pseudomallei S13] gi|184209861|gb|EDU06904.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1655] gi|217395202|gb|EEC35220.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 576] gi|225927815|gb|EEH23856.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pakistan 9] gi|237502852|gb|ACQ95170.1| ribosomal protein S2 [Burkholderia pseudomallei MSHR346] gi|238522672|gb|EEP86115.1| 30S ribosomal protein S2 [Burkholderia mallei GB8 horse 4] gi|242140153|gb|EES26555.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106b] gi|243063480|gb|EES45666.1| 30S ribosomal protein S2 [Burkholderia mallei PRL-20] gi|254220325|gb|EET09709.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710a] Length = 246 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 162/242 (66%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 3 ITMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRANAVNEVVQAVRGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|157364248|ref|YP_001471015.1| 30S ribosomal protein S2 [Thermotoga lettingae TMO] gi|167011239|sp|A8F717|RS2_THELT RecName: Full=30S ribosomal protein S2 gi|157314852|gb|ABV33951.1| ribosomal protein S2 [Thermotoga lettingae TMO] Length = 266 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 94/226 (41%), Positives = 147/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T++QLLE+GV FGHR WNPKM YI+ R +IIDL +T+ ++++A + Sbjct: 1 MPVITMKQLLEAGVHFGHRTRRWNPKMAPYIYGARKGIYIIDLQKTLKLVEEACDFVKSK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++FV TK QA V E A + + VN++WLGG++TN+KT+ I KL +LEE+ Sbjct: 61 ASEGATMIFVGTKKQAQHVVKEEAGKCGAFYVNNRWLGGLITNFKTIKPRIDKLIELEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E KKE+ + + +KL++ L G++ M +PD+++V+D +E++A+ EA ++ Sbjct: 121 EKNGELAKLPKKEQSRLRKALEKLRKNLGGLKAMDRIPDIIYVIDPRKERIAVAEANKMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP++ VVDTN +PD VD+VIP NDD+ RSI L +A A ++G Sbjct: 181 IPVIGVVDTNCDPDPVDFVIPANDDAIRSIKLITSKIAEAYLEGRE 226 >gi|77164326|ref|YP_342851.1| ribosomal protein S2 [Nitrosococcus oceani ATCC 19707] gi|254434810|ref|ZP_05048318.1| ribosomal protein S2 [Nitrosococcus oceani AFC27] gi|123594763|sp|Q3JCX5|RS2_NITOC RecName: Full=30S ribosomal protein S2 gi|76882640|gb|ABA57321.1| SSU ribosomal protein S2P [Nitrosococcus oceani ATCC 19707] gi|207091143|gb|EDZ68414.1| ribosomal protein S2 [Nitrosococcus oceani AFC27] Length = 269 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 149/225 (66%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ+LE+GV FGH+ WNPKM YIF +RNN HII+L +T+P+ +A + Sbjct: 1 MANVTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYMEATNYLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK A + V E A R VNS+WLGGM+TN++TV +SI++L DLE + Sbjct: 61 AANKGTVLFVGTKRAAQEPVREEAGRCGMPYVNSRWLGGMLTNFQTVRRSIKRLHDLEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K+E L + R RDKL+ L GI++M LPD +FV+D E++A+ EA +L Sbjct: 121 IQDGSLDRLKKREALTVRRDRDKLENNLGGIKNMTHLPDALFVIDVEHERIAVDEAAKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+VAVVDTNS+P DY+IPGNDD+ R+I L+ +A IDG Sbjct: 181 IPVVAVVDTNSDPRKADYIIPGNDDAIRAIRLYLRGIADGIIDGR 225 >gi|238650547|ref|YP_002916399.1| 30S ribosomal protein S2 [Rickettsia peacockii str. Rustic] gi|259495224|sp|C4K1A0|RS2_RICPU RecName: Full=30S ribosomal protein S2 gi|238624645|gb|ACR47351.1| 30S ribosomal protein S2 [Rickettsia peacockii str. Rustic] Length = 295 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 133/271 (49%), Positives = 183/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L + RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILYMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETV---VHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 244 QEHTDKGLTSKNVSKLKQAKKFSKTKNIDEE 274 >gi|54294597|ref|YP_127012.1| 30S ribosomal protein S2 [Legionella pneumophila str. Lens] gi|61215398|sp|Q5WVY7|RS2_LEGPL RecName: Full=30S ribosomal protein S2 gi|53754429|emb|CAH15913.1| 30S ribosomal protein S2 [Legionella pneumophila str. Lens] gi|307610409|emb|CBW99979.1| 30S ribosomal protein S2 [Legionella pneumophila 130b] Length = 254 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 116/254 (45%), Positives = 160/254 (62%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R+LLE+G FGHR WNPKM YIF RN HII+L +T+PML +S Sbjct: 1 MNNVSMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK A D + E A+R V+ +WLGGM+TN+KTV QSI +L++L+E+ Sbjct: 61 AANKAKILFVGTKRAAQDSIREHARRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K KKE L + R+ +KL+R+L GI +MGGLPD +FVVD E +A++EARRLR Sbjct: 121 KEKGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLR 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTN++PD +DYVIPGNDDS R++ ++ VA A +DG + Sbjct: 181 IPVIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDSEFV 240 Query: 242 ETVVHSKEGMQLEE 255 E +S E + E Sbjct: 241 EVTSNSNEEEKSGE 254 >gi|262372147|ref|ZP_06065426.1| ribosomal protein S2 [Acinetobacter junii SH205] gi|262312172|gb|EEY93257.1| ribosomal protein S2 [Acinetobacter junii SH205] Length = 250 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 1/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ DKL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMDKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A I G S A K Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKG 240 Query: 240 AG 241 Sbjct: 241 DD 242 >gi|261867313|ref|YP_003255235.1| 30S ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D11S-1] gi|293390942|ref|ZP_06635276.1| ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D7S-1] gi|261412645|gb|ACX82016.1| ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D11S-1] gi|290951476|gb|EFE01595.1| ribosomal protein S2 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 240 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 158/240 (65%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNAALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK A+D V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAATDAVQAAALECQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ +A +G + + ++A Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLASAVAAIKEGRGNEEAVAEELAQAAE 240 >gi|104783195|ref|YP_609693.1| 30S ribosomal protein S2 [Pseudomonas entomophila L48] gi|123380812|sp|Q1I626|RS2_PSEE4 RecName: Full=30S ribosomal protein S2 gi|95112182|emb|CAK16909.1| 30S ribosomal protein S2 [Pseudomonas entomophila L48] Length = 245 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALAFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +I+FV TK A V E A R V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKIMFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VD+VIPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDFVIPGNDDAIRAIELYMTSMADAVIRGR 225 >gi|238916783|ref|YP_002930300.1| small subunit ribosomal protein S2 [Eubacterium eligens ATCC 27750] gi|238872143|gb|ACR71853.1| small subunit ribosomal protein S2 [Eubacterium eligens ATCC 27750] Length = 237 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V + +A + ISD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAEYIYTERNGIHIIDLQKSVGKVDEAYKAISDIAAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+++E + + Sbjct: 61 TILFVGTKKQAQDAIATEAERCGMFYVNERWLGGMLTNFKTIQSRIARLKEIETMQEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE +N++++ +KL++ L GI++M LPD +F+VD +E++ +QEA L I ++ Sbjct: 121 FDVLPKKEVINLKKELEKLQKNLGGIKEMKRLPDAIFIVDPKKERICVQEAHALGIKLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +PD +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IADTNCDPDELDYVIPGNDDAIRAVKLIVAKMADAVIEA 219 >gi|15892035|ref|NP_359749.1| 30S ribosomal protein S2 [Rickettsia conorii str. Malish 7] gi|20139896|sp|Q92JF5|RS2_RICCN RecName: Full=30S ribosomal protein S2 gi|15619153|gb|AAL02650.1| 30S ribosomal protein S2 [Rickettsia conorii str. Malish 7] Length = 295 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 133/271 (49%), Positives = 184/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I+ LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+V ++ AL I +T Sbjct: 4 IPSVNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL L++ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE LN+ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS R+I L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRAIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETV---VHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 244 QEHTDKGLTSKNVSKLKQTKKFSKTKNIDEE 274 >gi|94310377|ref|YP_583587.1| 30S ribosomal protein S2 [Cupriavidus metallidurans CH34] gi|123383874|sp|Q1LNF8|RS2_RALME RecName: Full=30S ribosomal protein S2 gi|93354229|gb|ABF08318.1| 30S ribosomal subunit protein S2 [Cupriavidus metallidurans CH34] Length = 247 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 108/247 (43%), Positives = 162/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q AL+ + A Sbjct: 2 SVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +LFV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTVLFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ +KL++++ GI+DMGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALETMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + + Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGDDE 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|161723302|ref|NP_246923.2| 30S ribosomal protein S2 [Pasteurella multocida subsp. multocida str. Pm70] gi|38258886|sp|P57982|RS2_PASMU RecName: Full=30S ribosomal protein S2 Length = 240 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 158/243 (65%), Gaps = 4/243 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM +AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNEALVELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AGNNGKILFVGTKRAATEAVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G +H + Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAAAAVKEG---RHQDAVTEENFVA 237 Query: 242 ETV 244 E Sbjct: 238 EAE 240 >gi|309751420|gb|ADO81404.1| 30S ribosomal protein S2 [Haemophilus influenzae R2866] Length = 251 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 158/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 12 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 72 ASNNGKVLFVGTKRAASEAVQVAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 132 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 192 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 250 Query: 242 E 242 E Sbjct: 251 E 251 >gi|259907542|ref|YP_002647898.1| 30S ribosomal protein S2 [Erwinia pyrifoliae Ep1/96] gi|224963164|emb|CAX54648.1| 30S ribosomal protein S2 [Erwinia pyrifoliae Ep1/96] gi|283477382|emb|CAY73298.1| 30S ribosomal protein S2 [Erwinia pyrifoliae DSM 12163] Length = 243 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 157/243 (64%), Gaps = 1/243 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + R L+++G FGH+ WNPKM+ YI+C RN HII+L T PM + A + Sbjct: 1 MATDLISTRDLVQAGAHFGHQTRFWNPKMKPYIYCVRNKVHIINLDITQPMFETASDELE 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +R G+ILFV TK AS+ V E A Q+ VN +WLGGM+TNWKTV QSI++L+DL Sbjct: 61 EISSREGKILFVGTKRAASEAVKEYALSCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLA 120 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + TKKE L R+ KL+ +L GI+DMGGLPD +FV+D + E +AI+EA Sbjct: 121 IQSQDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+PD VDY+IPGNDD+ R+I L+ +V++A G ++ + + + Sbjct: 181 LGIPVFAIVDTNSDPDGVDYIIPGNDDAIRAIRLYLSIVSAAIRKGCSKDLAQQAEEIYA 240 Query: 240 AGE 242 E Sbjct: 241 DAE 243 >gi|255321104|ref|ZP_05362271.1| ribosomal protein S2 [Acinetobacter radioresistens SK82] gi|255301843|gb|EET81093.1| ribosomal protein S2 [Acinetobacter radioresistens SK82] Length = 272 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 110/248 (44%), Positives = 157/248 (63%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL +G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 25 MADYNVSMRDLLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 84 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 85 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 144 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 145 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 204 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A I G S A K+ Sbjct: 205 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKA 264 Query: 240 AGETVVHS 247 + Sbjct: 265 EEAPASEA 272 >gi|329118538|ref|ZP_08247242.1| 30S ribosomal protein S2 [Neisseria bacilliformis ATCC BAA-1200] gi|327465273|gb|EGF11554.1| 30S ribosomal protein S2 [Neisseria bacilliformis ATCC BAA-1200] Length = 287 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 109/231 (47%), Positives = 163/231 (70%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ+LE+GV FGH+ WNPKM YIF RN HII+L +T+P+ Q+A + + Sbjct: 40 MSQITMRQMLEAGVHFGHQTRFWNPKMAPYIFGARNKIHIINLEKTLPLFQEAQEAVRRL 99 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 100 VAAKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKSAV 159 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N + G++KKE L++ R+ +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 160 LANADTSGYSKKELLDLTREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 219 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP++AVVDTN++PD V +VIPGNDDS+++I L+C +A A ++G + + Sbjct: 220 IPVIAVVDTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEGKNQAVAE 270 >gi|189350815|ref|YP_001946443.1| 30S ribosomal protein S2 [Burkholderia multivorans ATCC 17616] gi|221198322|ref|ZP_03571368.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2M] gi|221208261|ref|ZP_03581265.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2] gi|221215457|ref|ZP_03588421.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD1] gi|189334837|dbj|BAG43907.1| small subunit ribosomal protein S2 [Burkholderia multivorans ATCC 17616] gi|221164641|gb|EED97123.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD1] gi|221171909|gb|EEE04352.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2] gi|221182254|gb|EEE14655.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2M] Length = 246 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRANAVNEVVQAVRGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|195953649|ref|YP_002121939.1| 30S ribosomal protein S2 [Hydrogenobaculum sp. Y04AAS1] gi|195933261|gb|ACG57961.1| ribosomal protein S2 [Hydrogenobaculum sp. Y04AAS1] Length = 271 Score = 308 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 108/234 (46%), Positives = 159/234 (67%), Gaps = 1/234 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++ LLE+GV FGH WNPKM Y++ RNN HIIDL +TV L++A +SD V+ Sbjct: 2 SVSMKDLLEAGVHFGHSKGRWNPKMAPYLYGVRNNIHIIDLGKTVLYLEEAYNFVSDAVS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G +LFV TK QA D VME A+R + VN +W+GG++TN+KTV +SI KLR LE + Sbjct: 62 KGAEMLFVGTKKQAKDVVMEEAQRCESFYVNERWVGGLLTNFKTVRKSIAKLRQLERMEK 121 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + KKE + ++R+ +L++ GI DM +PD+++VVDTNRE +A+ EARRL + Sbjct: 122 EGVFEVLPKKEVVTMKREMQRLQKLYKGIIDMDRIPDIIWVVDTNREHIAVTEARRLGVK 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 +VA+ D+N +PD +DY+IPGNDD+ +SI L +A A IDG R+ + ++T Sbjct: 182 VVAIADSNCDPDEIDYLIPGNDDAIKSIKLLTSRIADAVIDGKQRREASAVSET 235 >gi|257063546|ref|YP_003143218.1| SSU ribosomal protein S2P [Slackia heliotrinireducens DSM 20476] gi|256791199|gb|ACV21869.1| SSU ribosomal protein S2P [Slackia heliotrinireducens DSM 20476] Length = 250 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 102/224 (45%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I+ LLE+G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +++T Sbjct: 1 MAKVSIKSLLEAGAHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLIGLDQAYSFVAET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG +LFV TK QA + V A R VN++WLGGM+TN+ T+ ++++ +LE + Sbjct: 61 AAKGGTVLFVGTKKQAQEAVATQADRCGMPYVNARWLGGMLTNFVTIRSRVKRMEELEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE++ + ++ KL+ L+GIR+M LPD +FVVDTNRE+LAI EA+RL Sbjct: 121 QADGRMEVLPKKEQILLNKELAKLQTNLNGIRNMTKLPDAVFVVDTNREQLAIHEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V +DTN +PD VD+ IP NDD+ RS+ L VA A ID Sbjct: 181 IPVVGTLDTNCDPDDVDFGIPANDDAIRSVNLLATFVADAVIDA 224 >gi|251793346|ref|YP_003008074.1| 30S ribosomal protein S2 [Aggregatibacter aphrophilus NJ8700] gi|247534741|gb|ACS97987.1| ribosomal protein S2 [Aggregatibacter aphrophilus NJ8700] Length = 240 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 159/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK A+D V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAATDAVQAAALECQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRGREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD +D+VIPGNDD++R+I L+ +A +G + + ++A Sbjct: 181 IPVFAIVDTNSSPDGIDFVIPGNDDAARAIQLYLSSAVAAIKEGRGNEAAVAEELAQAAE 240 >gi|161899039|ref|YP_198638.2| 30S ribosomal protein S2 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 279 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 123/278 (44%), Positives = 175/278 (62%), Gaps = 2/278 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVIS 60 +P+ T+R L SGV FGH+ WN KM YI+ N HIIDL +T+P+LQ A++V+ Sbjct: 1 MPEVTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMKVLY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +GGRILFV TK QA D + A R QY VN +WLGGM+TNW T+S SI+ L E Sbjct: 61 NVAFQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTISSSIKTLVQYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN EN TKKE NIE+KR KL +AL GIR+MG +PD++F++DTN+E +A++EA +L Sbjct: 121 KVLNAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDTNKEHIAVKEAEKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTNS+PD + Y IPGNDDS +SI L+C L A + + G+ + G Sbjct: 181 EIPVVAILDTNSDPDGITYPIPGNDDSRKSIELYCRLAADSILAGMESSLARSGVKVGDI 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + ++G + + + ++ V E S Sbjct: 241 KDEEFIQEKGDSIIRTKKGRSKVYKEDEKEVVTNEDES 278 >gi|291614114|ref|YP_003524271.1| ribosomal protein S2 [Sideroxydans lithotrophicus ES-1] gi|291584226|gb|ADE11884.1| ribosomal protein S2 [Sideroxydans lithotrophicus ES-1] Length = 240 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 109/238 (45%), Positives = 158/238 (66%), Gaps = 1/238 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L +TV M AL+ + A Sbjct: 2 QVTMRQMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIVNLEKTVVMFNDALKEVRKIAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + G ILFVATK QA + + E A+R V+ +WLGGM+TN+KTV SI++LR+LE ++ Sbjct: 62 KKGTILFVATKRQAREIIREEAQRCGSPFVDHRWLGGMLTNFKTVQTSIKRLRELETMIE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L + R+ +KL R+L GI+D+ GLP +FV+D +K + EA++L IP Sbjct: 122 DGSIEKVSKKEGLVLRRELEKLDRSLGGIKDLQGLPSAIFVIDVGYQKGTVTEAQKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 ++ VVDTN +P VDYVIPGNDDSS++I L+ VA A ++G + + + A + Sbjct: 182 VIGVVDTNHSPLGVDYVIPGNDDSSQAIRLYARGVADAILEGREQALNDLTAQVAESA 239 >gi|312883808|ref|ZP_07743527.1| 30S ribosomal protein S2 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368557|gb|EFP96090.1| 30S ribosomal protein S2 [Vibrio caribbenthicus ATCC BAA-2122] Length = 242 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 162/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALADLAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TN+KTV QSI++L++LE + Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEGQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + A++ +G + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAAASVTEGRNKDVAEAAEKDGFVE 240 >gi|220912154|ref|YP_002487463.1| 30S ribosomal protein S2 [Arthrobacter chlorophenolicus A6] gi|254764452|sp|B8HFN5|RS2_ARTCA RecName: Full=30S ribosomal protein S2 gi|219859032|gb|ACL39374.1| ribosomal protein S2 [Arthrobacter chlorophenolicus A6] Length = 291 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 110/251 (43%), Positives = 171/251 (68%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TV++ IQ++++LEE+ Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQATRVGQPYVNQRWLGGMLTNFQTVAKRIQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L ++R+ KL+ L GIR++ P ++++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSAYTKKELLLLKRELTKLESNLGGIRNLTKAPSVLWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L +VA A +G+ +++ T++ Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVVADAVAEGLIARNNRGSGTTEAP 240 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 241 EEPLAEWEREL 251 >gi|303232714|ref|ZP_07319399.1| ribosomal protein S2 [Atopobium vaginae PB189-T1-4] gi|302481200|gb|EFL44275.1| ribosomal protein S2 [Atopobium vaginae PB189-T1-4] Length = 258 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 112/263 (42%), Positives = 168/263 (63%), Gaps = 9/263 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ + IR LLE+G +GH+ WNPKM+ YIF +RN +I+DL QTV KA + Sbjct: 1 MAV-KINIRTLLEAGCHYGHQTRRWNPKMKPYIFGDRNGIYILDLKQTVLCADKAYSFLK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D ++ G ILFV TK QA + + E A R +N +WLGGM+TN+ T+ I ++ +LE Sbjct: 60 DVASKHGNILFVGTKKQAQEPISEQAARCNMPYINQRWLGGMLTNFVTMRSRIDRMEELE 119 Query: 121 ELLNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ KKE+ + ++ +KL+R L G+RDM LP +F+VD+ RE++AI+EARR Sbjct: 120 AMVENGVMATLPKKEQAVLTKELEKLQRNLGGVRDMHTLPQALFIVDSKREEIAIREARR 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++DTNS+PDLVDY IP NDD+ RS++L C+LVA A + G ++ + + Sbjct: 180 LHIPVVALLDTNSDPDLVDYGIPANDDAIRSVSLMCELVADAILAGSGKEQ--ISEEEMK 237 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 AGET + D++++E+ Sbjct: 238 AGETTAAVETA-----DAENAEA 255 >gi|254457743|ref|ZP_05071171.1| ribosomal protein S2 [Campylobacterales bacterium GD 1] gi|207086535|gb|EDZ63819.1| ribosomal protein S2 [Campylobacterales bacterium GD 1] Length = 254 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 147/227 (64%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + ++ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G +LFV TK QA V +AA V+++WLGGM+TN+ T+ +SI+KL + E+ N Sbjct: 62 GQTVLFVGTKKQARSSVRDAAIACGMPYVDNRWLGGMLTNFPTIQKSIRKLDVITEMQEN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL+ GIR+M LPD++FVVD +E +AI EAR L IP+ Sbjct: 122 GQIDLLTKKEALMLSRKKEKLQEYFGGIRNMKKLPDMLFVVDAVKEHIAILEARCLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA +DTN +PDL+ Y IPGNDD+ RSI LFC + A +G A + + Sbjct: 182 VAPLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTEAINEGKALRDA 228 >gi|238026902|ref|YP_002911133.1| 30S ribosomal protein S2 [Burkholderia glumae BGR1] gi|237876096|gb|ACR28429.1| Ribosomal protein S2 [Burkholderia glumae BGR1] Length = 246 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+AI EA +L +P+ Sbjct: 123 GETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAVRGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|52308040|gb|AAU38540.1| RpsB protein [Mannheimia succiniciproducens MBEL55E] Length = 256 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 114/245 (46%), Positives = 161/245 (65%), Gaps = 4/245 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM AL ++ Sbjct: 15 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNGALAELTRI 74 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 75 ASNNGKILFVGTKRAATEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 134 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 135 SQDGTFDKLTKKEALVRTREMEKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 194 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD +D+VIPGNDD++R+I L+ A+A +G ++Q + + K A Sbjct: 195 IPVFAVVDTNSNPDGIDFVIPGNDDATRAIQLYVTAAAAAVKEGRSQQTAT---EEKFAE 251 Query: 242 ETVVH 246 E Sbjct: 252 EVAAE 256 >gi|21242175|ref|NP_641757.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str. 306] gi|294624549|ref|ZP_06703226.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666403|ref|ZP_06731649.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|25009201|sp|Q8PMK5|RS2_XANAC RecName: Full=30S ribosomal protein S2 gi|21107592|gb|AAM36293.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str. 306] gi|292601155|gb|EFF45215.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603845|gb|EFF47250.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 265 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 101/265 (38%), Positives = 155/265 (58%), Gaps = 1/265 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFS 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLD 266 +G + ++ + Sbjct: 241 ADAADEGKGRRAPAKKGDKKADAAE 265 >gi|262278376|ref|ZP_06056161.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202] gi|262258727|gb|EEY77460.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202] Length = 250 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 156/240 (65%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHESIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 240 >gi|212704257|ref|ZP_03312385.1| hypothetical protein DESPIG_02312 [Desulfovibrio piger ATCC 29098] gi|212672337|gb|EEB32820.1| hypothetical protein DESPIG_02312 [Desulfovibrio piger ATCC 29098] Length = 253 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 155/227 (68%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A + DT Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLFRVAYDKVVDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG++LF+ TK QA + V A ++ QY V ++W+GG +TN+ T+ +S+++L+ LE + Sbjct: 61 VANGGKVLFIGTKRQAQEAVATEATKANQYYVTNRWMGGTLTNFVTIQKSVERLKKLEGM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L +ER+ KL++ L GI++M LP L F++D +RE +A++E R+L Sbjct: 121 FADGSINRYQKKEILLLEREMQKLEQTLGGIKNMDRLPQLAFIIDPHREDIAVKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPIVAV DTN +PD++DY+IPGNDD+ R+I LF + A +G A+ Sbjct: 181 IPIVAVTDTNCDPDVIDYIIPGNDDAIRAIKLFVTAFSEACQEGEAQ 227 >gi|73541570|ref|YP_296090.1| 30S ribosomal protein S2 [Ralstonia eutropha JMP134] gi|123774077|sp|Q470D7|RS2_RALEJ RecName: Full=30S ribosomal protein S2 gi|72118983|gb|AAZ61246.1| SSU ribosomal protein S2P [Ralstonia eutropha JMP134] Length = 247 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 108/247 (43%), Positives = 161/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q AL+ + A Sbjct: 2 SVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G I+FV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTIMFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KKE L ER+ KL++++ GI++MGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALDTMSKKEALMFEREMIKLEKSIGGIKEMGGIPDAIFVVDVGYHKIAVTEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + G+ Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGGDD 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|224510723|pdb|3FIH|B Chain B, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 30s Subunit, Trnas And The Ternary Complex. gi|294662218|pdb|2WWL|B Chain B, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 30s, The P-Site Trna And The Tnac Leader Peptide (Part 1 Of 2). gi|308387966|pdb|3OFO|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308387987|pdb|3OFP|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320024|pdb|3OFA|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320045|pdb|3OFB|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320128|pdb|3OFX|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320149|pdb|3OFY|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The Second 70s Ribosome gi|315113613|pdb|3OAQ|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|315113634|pdb|3OAR|B Chain B, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 218 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 110/218 (50%), Positives = 153/218 (70%), Gaps = 1/218 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ +R G+IL Sbjct: 1 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQG 129 FV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VD Sbjct: 121 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 TNS+PD VD+VIPGNDD+ R++ L+ VA+ +G + Sbjct: 181 TNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRS 218 >gi|318041333|ref|ZP_07973289.1| 30S ribosomal protein S2 [Synechococcus sp. CB0101] Length = 240 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 95/233 (40%), Positives = 139/233 (59%), Gaps = 1/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVIAIEATRCGAAYVNQRWLGGMLTNWTTMRARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G+++M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELERLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP+V+++DTN +PDL D IP NDD+ RS+ L +A A +G + G Sbjct: 181 IPLVSMLDTNCDPDLCDVPIPCNDDAVRSVQLVLGRLADAINEGRHGANDQRG 233 >gi|150016072|ref|YP_001308326.1| 30S ribosomal protein S2 [Clostridium beijerinckii NCIMB 8052] gi|189044931|sp|A6LSP0|RS2_CLOB8 RecName: Full=30S ribosomal protein S2 gi|149902537|gb|ABR33370.1| ribosomal protein S2 [Clostridium beijerinckii NCIMB 8052] Length = 233 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 98/230 (42%), Positives = 145/230 (63%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKAEEAYNFVKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA + + E A RS + VN++WLGGM+TN+ T+ I+KL +E++ Sbjct: 61 AEEGKDILFVGTKKQAQEAIQEEAIRSNMHFVNNRWLGGMLTNFSTIRGRIRKLEQIEKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRL 180 + KKE + ++ + +KL++ L GIR++ MF+VD +EK AI EA+ L Sbjct: 121 QEDGTFDVLPKKEVIKLKGEMEKLEKNLGGIRNLDASNVGAMFIVDPRKEKNAILEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 GIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIMEGRQGEQ 230 >gi|307718988|ref|YP_003874520.1| 30S ribosomal protein S2 [Spirochaeta thermophila DSM 6192] gi|306532713|gb|ADN02247.1| 30S ribosomal protein S2 [Spirochaeta thermophila DSM 6192] Length = 316 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 168/270 (62%), Gaps = 15/270 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A +V+ T Sbjct: 1 MAVVTMKNLLESGVHFGHQKRRWDPRMKKYIFAERNGIHIIDLQKTIQAIKEAYEVVRKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA + A+R + VN +WLGG +TN++T+ +SI +L+ LE++ Sbjct: 61 VLSGKSVLFVGTKRQAQAAIQREAERCGMFYVNHRWLGGTLTNFETIKKSILRLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + +++ +L+R L GI++M LP ++F++DT E +A+ EA++L Sbjct: 121 EVDGTFATMSKKEVSRLMKEKARLQRNLGGIKEMKELPGVVFIIDTKHEAIAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+ VVDTN NP+++D+ IPGNDD+ R+I LF ++A A I+ + Sbjct: 181 IPIIGVVDTNCNPEIIDHPIPGNDDAIRAINLFSKIIADAVIE--------------ADN 226 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 E + E +Q EE S+ +E+A Sbjct: 227 EMGLEVVESLQEEEPIDESQIETGKEEEIA 256 >gi|78047035|ref|YP_363210.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123757529|sp|Q3BVK3|RS2_XANC5 RecName: Full=30S ribosomal protein S2 gi|78035465|emb|CAJ23110.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 265 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 101/265 (38%), Positives = 155/265 (58%), Gaps = 1/265 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFS 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLD 266 +G + ++ + Sbjct: 241 AESADEGKGRRAPAKKGDKKADAAE 265 >gi|7524612|ref|NP_042366.1| ribosomal protein S2 [Pinus thunbergii] gi|1173241|sp|P41605|RR2_PINTH RecName: Full=30S ribosomal protein S2, chloroplastic gi|1262606|dbj|BAA04324.1| ribosomal protein S2 [Pinus thunbergii] gi|228016371|gb|ACP51204.1| ribosomal protein S2 [Pinus thunbergii] Length = 234 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL++ + Sbjct: 67 RGKQFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRALR 232 >gi|163801779|ref|ZP_02195676.1| 30S ribosomal protein S2 [Vibrio sp. AND4] gi|159174287|gb|EDP59091.1| 30S ribosomal protein S2 [Vibrio sp. AND4] Length = 242 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF R+ HII+L +TVPM +AL ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARSRVHIINLEKTVPMFNEALAELAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++ E Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKEFEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 121 AQDGTFEKLTKKEALMRTRDMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ AVVDTNSNPD VDY+IPGNDD+ R++ L+ + ASA +G + + + Sbjct: 181 IPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAASAVTEGRNKDVAVVAEKDGFVE 240 >gi|332527870|ref|ZP_08403907.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2] gi|332112447|gb|EGJ12240.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2] Length = 247 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 103/245 (42%), Positives = 156/245 (63%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R++LE+GV FGH+ WNPKM YI+ RN HII+L +T P+ + A++ + AR Sbjct: 3 VSMREMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTQPLFEDAMKFVRQLSAR 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G IL + TK QA + + A+R V+ +WLGGM+TN+KTV S++KL+D++ Sbjct: 63 RGTILMIGTKRQAREVIAMEAQRCGMPYVDQRWLGGMLTNFKTVKGSLKKLKDMQATKEA 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L +R+ KL++ + GI+DMG LPD MFV+D K+A+ EA++L IP++ Sbjct: 123 GMEQMIKKEALLFDRELVKLEKDIGGIQDMGALPDAMFVIDVGYHKIAVAEAKKLGIPVI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 VVDTN +P +DYVIPGNDDS++++AL+ VA A ++G A + + A E V Sbjct: 183 GVVDTNHSPVGIDYVIPGNDDSAKAVALYARAVADAVLEGRASATNEVVQAAAGADEFVE 242 Query: 246 HSKEG 250 +E Sbjct: 243 VREEA 247 >gi|325523570|gb|EGD01869.1| 30S ribosomal protein S2 [Burkholderia sp. TJI49] Length = 246 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 111/242 (45%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+AI EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEATKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAVRGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|328944067|ref|ZP_08241532.1| 30S ribosomal protein S2 [Atopobium vaginae DSM 15829] gi|327492036|gb|EGF23810.1| 30S ribosomal protein S2 [Atopobium vaginae DSM 15829] Length = 270 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 114/267 (42%), Positives = 170/267 (63%), Gaps = 11/267 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ + IR LLE+G +GH+ WNPKM+ YIF ERN +I+DL QTV KA + Sbjct: 14 MAV-KINIRTLLEAGCHYGHQTRRWNPKMKPYIFGERNGIYILDLKQTVVNADKAYTFLK 72 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++ GRILFV TK QA + V E AKR +N +WLGGM+TN+ T+ I ++ +LE Sbjct: 73 NCASKKGRILFVGTKKQAQEAVAEQAKRCDMPYINQRWLGGMLTNFVTMRSRIDRMEELE 132 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + KKE+ + ++ +KL+R L G+RDM LP +F+VD+ RE++AI+EA R Sbjct: 133 AMVEDGRMAALPKKEQAVLGKELEKLQRNLGGVRDMHALPQALFIVDSKREEIAIREANR 192 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA++DTNS+PD+VDY IP NDD+ RS+ L C+LVA A + G ++ Sbjct: 193 LHIPVVALLDTNSDPDVVDYGIPANDDAIRSVNLMCELVADAVLAGKGKEQ--------I 244 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD 266 + E + + + +EDS S ++SV + Sbjct: 245 SEEEMKQGSQEEKAQEDS-SDKASVSE 270 >gi|226952616|ref|ZP_03823080.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244] gi|226836696|gb|EEH69079.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244] Length = 267 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 158/240 (65%), Gaps = 1/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL ++ Sbjct: 18 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVN 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 + ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 78 NLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 137 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+RAL G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 138 TQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 197 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 198 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 257 >gi|58426194|gb|AAW75231.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 375 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 106/278 (38%), Positives = 163/278 (58%), Gaps = 12/278 (4%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+PQ T+RQ+LE+GV FGH+ W+P M +YIF R HII+L +TVP+ A+ +S Sbjct: 108 AMPQVTMRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSS 167 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE- 120 + G ILF+ TK A + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 168 IAQKRGTILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEA 227 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + K E L++ R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 228 AETDGTFDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKL 287 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A + Sbjct: 288 GIPVIAVVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA----------AP 337 Query: 241 GETVVHSKE-GMQLEEDSQSSESSVLDGQEVAVVPELM 277 V +E + ++ + + G++ A P Sbjct: 338 NSASVREEEFSAESADEGKGRRAPAKKGEKKADAPAAE 375 >gi|145408421|ref|NP_817151.2| ribosomal protein S2 [Pinus koraiensis] gi|145048674|gb|AAO73999.2| ribosomal protein S2 [Pinus koraiensis] Length = 249 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 22 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAG 81 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL++ + Sbjct: 82 RGKQFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQD 141 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 142 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIP 201 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + + SA +G A + Sbjct: 202 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRALR 247 >gi|187478228|ref|YP_786252.1| 30S ribosomal protein S2 [Bordetella avium 197N] gi|123766158|sp|Q2L162|RS2_BORA1 RecName: Full=30S ribosomal protein S2 gi|115422814|emb|CAJ49342.1| 30S ribosomal protein S2 [Bordetella avium 197N] Length = 249 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 111/222 (50%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L QTV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK A + V A+R V+++WLGGM+TN+KTV SI++L+++E ++ + Sbjct: 64 NILFVGTKRAARELVATEAERCGMPFVDARWLGGMLTNFKTVKSSIKRLKEMEVMVADGS 123 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L +R+ DKL +A+ GI+DM GLPD +FV+D K+A+ EAR L IP+VA Sbjct: 124 VERLTKKEGLLFQRELDKLNKAIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 VVDTN +PD VDY+IPGNDDS+R+IAL+ +A A ++G + Sbjct: 184 VVDTNHSPDGVDYIIPGNDDSARAIALYAKGIADAVLEGREQ 225 >gi|317471761|ref|ZP_07931100.1| ribosomal protein S2 [Anaerostipes sp. 3_2_56FAA] gi|316900738|gb|EFV22713.1| ribosomal protein S2 [Anaerostipes sp. 3_2_56FAA] Length = 242 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 95/224 (42%), Positives = 149/224 (66%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKEC 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG+ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+ ++++ Sbjct: 61 VAEGGKILFVGTKKQAQDSIKTEAERCGMFYVNQRWLGGMLTNFKTIRSRIDRLKKIKKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L + ++ DKL++ L GI +M +PD++F+VD +E + +QEA L Sbjct: 121 EEDGTFEVLPKKEVLELRKEMDKLQKNLGGIEEMNEIPDMIFIVDPKKENICVQEAHTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V + DTNS+P+ ++Y+IPGNDD+ R++ L +A A ++ Sbjct: 181 IPLVGIADTNSDPEDLEYIIPGNDDAIRAVKLITSAMADAVVEA 224 >gi|149374437|ref|ZP_01892211.1| ribosomal protein S2 [Marinobacter algicola DG893] gi|149361140|gb|EDM49590.1| ribosomal protein S2 [Marinobacter algicola DG893] Length = 250 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 117/258 (45%), Positives = 162/258 (62%), Gaps = 9/258 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM ++IF RN HII+L QTVP + AL + + Sbjct: 1 MAQVNMRDLLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNDALNFVHNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A+ + E A RS Q VN +WLGGM+TN+KT+ QSI++ RDLE Sbjct: 61 AGNKNKILFVGTKRAAAKIIKEEALRSNQPYVNHRWLGGMLTNYKTIRQSIRRYRDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L+ R+ D+L+R++ GI+DMGGLPD MFV+D + E++AI+EA +L Sbjct: 121 SQDGTFDKLTKKEALDRTREMDRLERSIGGIKDMGGLPDAMFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+PD VDYVIPGNDD+ R+I ++ VA I+ A Q + GAD Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIQIYVQAVAETCIE--AAQSAGAGADE---- 234 Query: 242 ETVVHSKEGMQLEEDSQS 259 V E + + Sbjct: 235 --FVEVSEDAEGAAPAAE 250 >gi|227497532|ref|ZP_03927760.1| ribosomal protein S2 [Actinomyces urogenitalis DSM 15434] gi|226832986|gb|EEH65369.1| ribosomal protein S2 [Actinomyces urogenitalis DSM 15434] Length = 285 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 119/270 (44%), Positives = 165/270 (61%), Gaps = 9/270 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLESGV FGH+ WNPKM+R+I ERN ++IDL +TV + A + +T Sbjct: 1 MAIVTMRQLLESGVHFGHQTRRWNPKMKRFILTERNGIYVIDLVKTVEGINTAYDFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VARGG ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE+ Sbjct: 61 VARGGNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL + L GIRDM LP ++VVDT +E LAI EAR+L Sbjct: 121 DFDDVAGSGRTKKELLMMRREKDKLTKTLGGIRDMAKLPAAIWVVDTKKEHLAIAEARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD V Y IPGNDD+ R++ L +VA AA +G+ + + Sbjct: 181 NIPVIAILDTNCDPDEVTYGIPGNDDAIRAVTLLTRVVADAAAEGLLARSAGR------- 233 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 T + G E E+ +L G E Sbjct: 234 ARTGEEVEAGTADAEPLPEWEAELLAGAEA 263 >gi|225023956|ref|ZP_03713148.1| hypothetical protein EIKCOROL_00823 [Eikenella corrodens ATCC 23834] gi|224942981|gb|EEG24190.1| hypothetical protein EIKCOROL_00823 [Eikenella corrodens ATCC 23834] Length = 247 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 160/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ+LE+GV FGH+ WNPKME+YIF RN HII+L +T+P+ Q+A + Sbjct: 1 MSQITMRQMLEAGVHFGHQTRYWNPKMEQYIFGARNKIHIINLEKTLPLFQEAQDAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA D V E A R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 61 AANKGTILFVGTKRQARDIVREEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKAAI 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N E G+ KKE L I+R+ +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAEASGYNKKELLTIQREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLTEAGKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++ VVDTN++P+ V +VIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIGVVDTNNDPEGVKHVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|297538503|ref|YP_003674272.1| 30S ribosomal protein S2 [Methylotenera sp. 301] gi|297257850|gb|ADI29695.1| ribosomal protein S2 [Methylotenera sp. 301] Length = 248 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 110/223 (49%), Positives = 155/223 (69%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R +LE+GV FGH+ WNPKM +IF +RN HI++L +T+PM + AL+ + A Sbjct: 2 SVTMRDMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPMFEDALKHVRTLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GRILFV TK QA D V E A R+ VN +WLGGM+TN+KTV QSI++L D E +L Sbjct: 62 NKGRILFVGTKRQARDIVKEEASRAGCAYVNHRWLGGMLTNFKTVKQSIKRLHDFEVMLE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + F KKE L +R+ +KL+R++ GI++MGGLPD +F++D E AI EA +L IP Sbjct: 122 DGSLEKFGKKEALGYKREIEKLERSIGGIKEMGGLPDAIFIIDVGHESGAITEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++ +VDTN++PD V +VIPGNDDSSR+I L+ +A A ++G Sbjct: 182 VIGIVDTNNSPDGVAFVIPGNDDSSRAIRLYARGIADAVLEGR 224 >gi|78356180|ref|YP_387629.1| 30S ribosomal protein S2 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123727753|sp|Q313G2|RS2_DESDG RecName: Full=30S ribosomal protein S2 gi|78218585|gb|ABB37934.1| SSU ribosomal protein S2P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 260 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 111/235 (47%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ +LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A + DT Sbjct: 1 MAYVTMKGMLETGVHFGHQTRRWNPKMGTYIFGARNGIHIIDLQQTVKLFRTAHDKVVDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG+++F+ TK QA + V A R+ QY V ++W+GG +TN++T+ +SI +L+ LE + Sbjct: 61 VARGGKVIFIGTKRQAQEAVQTEAGRAGQYYVTNRWMGGTLTNFQTIRKSIDRLKKLEVM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L + R+ DKL L GI+DM LP L F++D NRE +A++E RRL Sbjct: 121 FEDGTVNRYQKKEVLRLRREMDKLNLVLGGIKDMENLPQLAFIIDPNREDIAVKECRRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPIVAV DTN +PDL+DYVIPGNDD+ R+I LF +A A ++G A + + Sbjct: 181 IPIVAVTDTNCDPDLIDYVIPGNDDAIRAIKLFVGHIADACLEGEAMRKETKAEN 235 >gi|251771485|gb|EES52062.1| ribosomal protein S2 [Leptospirillum ferrodiazotrophum] Length = 255 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 103/247 (41%), Positives = 153/247 (61%), Gaps = 2/247 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TI++LL++GV FGH+ WNPKM+R+I+ ERN +IIDL QT ++A I Sbjct: 1 MSSVTIKELLDAGVHFGHQAKRWNPKMKRFIYGERNGIYIIDLQQTTRRYRQATAFIKKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LF+ATK QA V+E A+R + V +WLGGM+TN +T+ +S+ +L+ +E + Sbjct: 61 VGEGKSVLFIATKKQAQSIVVEEAERCGMFHVTQRWLGGMLTNHQTIRKSVDRLKKIEAM 120 Query: 123 LNKENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE +E++ KL+ L GIR M LP +FV+D +E +AI EA RL Sbjct: 121 KEGDQWARLPKKEIAQLEKEESKLRSTLSGIRGMSQLPGAVFVIDPKKEHIAIHEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID-GIARQHSYMGADTKSA 240 IP+VA+VDTN +PDL+D+ IP NDD+ RSI L +A A I+ GI+R+ + D + Sbjct: 181 IPVVAMVDTNCDPDLIDFPIPANDDAIRSIRLIASGIADAVIEGGISRRSAQKAPDAATV 240 Query: 241 GETVVHS 247 + + Sbjct: 241 NAGLEEA 247 >gi|34497651|ref|NP_901866.1| 30S ribosomal protein S2 [Chromobacterium violaceum ATCC 12472] gi|61215687|sp|Q7NVZ4|RS2_CHRVO RecName: Full=30S ribosomal protein S2 gi|34103507|gb|AAQ59869.1| 30S ribosomal protein S2 [Chromobacterium violaceum ATCC 12472] Length = 243 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 110/237 (46%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM +YIF RN HII+L +T+P+ +A + + A Sbjct: 4 NVTMRQMLEAGVHFGHQTRFWNPKMAKYIFGSRNKIHIINLEKTLPLFVEAQEYVRRLAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ++FV TK QA + V E A R V+ +WLGGM+TN+KTV QSI++L + +L Sbjct: 64 NKGTVMFVGTKRQAREIVREEAARCGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKRAILE 123 Query: 125 K-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G+ KKE L+++R+ +KL+R+L GI+DM GLPD +FV+DT +K I EA++L IP Sbjct: 124 GAGETGYNKKELLDLQREVEKLERSLGGIKDMKGLPDAIFVIDTGYQKGTIVEAKKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 ++ VVDTN++PD +DYV+PGNDDSSR+I L+ +A A ++G A + A ++A Sbjct: 184 VIGVVDTNNSPDGIDYVVPGNDDSSRAIRLYARGIADAVLEGRAHSLQEIVAAAETA 240 >gi|78184820|ref|YP_377255.1| 30S ribosomal protein S2 [Synechococcus sp. CC9902] gi|116070695|ref|ZP_01467964.1| 30S ribosomal protein S2 [Synechococcus sp. BL107] gi|123743537|sp|Q3AXI9|RS2_SYNS9 RecName: Full=30S ribosomal protein S2 gi|78169114|gb|ABB26211.1| SSU ribosomal protein S2P [Synechococcus sp. CC9902] gi|116066100|gb|EAU71857.1| 30S ribosomal protein S2 [Synechococcus sp. BL107] Length = 239 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 95/235 (40%), Positives = 138/235 (58%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL +T + A + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVKTAVCMNNAYKWTRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEAARCGAAYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKTMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G D Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEGRHGSNEQRGGD 235 >gi|228017001|gb|ACP51824.1| ribosomal protein S2 [Pinus canariensis] gi|228017442|gb|ACP52258.1| ribosomal protein S2 [Pinus merkusii] gi|228017693|gb|ACP52505.1| ribosomal protein S2 [Pinus pinaster] Length = 234 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL++ + Sbjct: 67 RGKQFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRALR 232 >gi|91784119|ref|YP_559325.1| 30S ribosomal protein S2 [Burkholderia xenovorans LB400] gi|296158904|ref|ZP_06841732.1| ribosomal protein S2 [Burkholderia sp. Ch1-1] gi|123062774|sp|Q13XB6|RS2_BURXL RecName: Full=30S ribosomal protein S2 gi|91688073|gb|ABE31273.1| SSU ribosomal protein S2P [Burkholderia xenovorans LB400] gi|295890779|gb|EFG70569.1| ribosomal protein S2 [Burkholderia sp. Ch1-1] Length = 250 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 163/243 (67%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + E A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 63 RGTILFVGTKRQSRDTIAEEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L IP+ Sbjct: 123 GETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A + + A G+ Sbjct: 183 IAVVDTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGRANAVNEVVQAARGGDGDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|226940993|ref|YP_002796067.1| 30S ribosomal protein S2 [Laribacter hongkongensis HLHK9] gi|226715920|gb|ACO75058.1| RpsB [Laribacter hongkongensis HLHK9] Length = 244 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 112/230 (48%), Positives = 162/230 (70%), Gaps = 1/230 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+RQ+LE+GV FGH+ WNPKM +YIF RN HII+L +T+PM +A + A Sbjct: 4 QVTMRQMLEAGVHFGHQTRFWNPKMNQYIFGARNKIHIINLEKTLPMFIEAQNYVRRLAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 G+ILFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L D LL Sbjct: 64 NKGQILFVGTKRQAREIIREEASRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEDKMALLG 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N + G+ KKE L+++R+ +KL+R+L GI+DM GLPD +F++DT +K + EA++L IP Sbjct: 124 NADQTGYNKKELLDLQREVEKLERSLGGIKDMKGLPDAIFIIDTGYQKGTLTEAKKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 ++ VVDTN+NPD +DYV+PGNDDS+R+I L+ +A A ++G A+ + Sbjct: 184 VIGVVDTNNNPDGIDYVVPGNDDSARAIRLYARGMADAVLEGRAQSLQEV 233 >gi|237688585|ref|YP_002905202.1| ribosomal protein S2 [Pinus gerardiana] gi|237688653|ref|YP_002905269.1| ribosomal protein S2 [Pinus krempfii] gi|324986352|ref|YP_004276224.1| ribosomal protein S2 [Pinus lambertiana] gi|209573763|sp|Q85X64|RR2_PINKO RecName: Full=30S ribosomal protein S2, chloroplastic gi|226876046|gb|ACO89302.1| ribosomal protein S2 [Pinus gerardiana] gi|226951111|gb|ACO94174.1| ribosomal protein S2 [Pinus krempfii] gi|228016119|gb|ACP50956.1| ribosomal protein S2 [Pinus sibirica] gi|228016176|gb|ACP51012.1| ribosomal protein S2 [Pinus squamata] gi|228016241|gb|ACP51076.1| ribosomal protein S2 [Pinus strobus] gi|228016617|gb|ACP51446.1| ribosomal protein S2 [Pinus albicaulis] gi|228016750|gb|ACP51577.1| ribosomal protein S2 [Pinus armandii] gi|228016873|gb|ACP51698.1| ribosomal protein S2 [Pinus ayacahuite] gi|228017120|gb|ACP51941.1| ribosomal protein S2 [Pinus cembra] gi|228017241|gb|ACP52060.1| ribosomal protein S2 [Pinus flexilis] gi|228017307|gb|ACP52125.1| ribosomal protein S2 [Pinus lambertiana] gi|228017500|gb|ACP52315.1| ribosomal protein S2 [Pinus monticola] gi|228017563|gb|ACP52377.1| ribosomal protein S2 [Pinus parviflora var. pentaphylla] gi|228017627|gb|ACP52440.1| ribosomal protein S2 [Pinus peuce] gi|257042524|gb|ACV32798.1| ribosomal protein S2 [Pinus monticola] gi|257042553|gb|ACV32826.1| ribosomal protein S2 [Pinus monticola] gi|257042581|gb|ACV32853.1| ribosomal protein S2 [Pinus monticola] gi|257042611|gb|ACV32882.1| ribosomal protein S2 [Pinus monticola] gi|257042639|gb|ACV32909.1| ribosomal protein S2 [Pinus monticola] gi|257042667|gb|ACV32936.1| ribosomal protein S2 [Pinus monticola] gi|257042696|gb|ACV32964.1| ribosomal protein S2 [Pinus monticola] gi|257042724|gb|ACV32991.1| ribosomal protein S2 [Pinus monticola] gi|257042751|gb|ACV33017.1| ribosomal protein S2 [Pinus monticola] gi|257042779|gb|ACV33044.1| ribosomal protein S2 [Pinus monticola] gi|323514201|gb|ADX89748.1| ribosomal protein S2 [Pinus lambertiana] Length = 234 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK +DL++ + Sbjct: 67 RGKQFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRALR 232 >gi|229827690|ref|ZP_04453759.1| hypothetical protein GCWU000182_03079 [Abiotrophia defectiva ATCC 49176] gi|229788150|gb|EEP24264.1| hypothetical protein GCWU000182_03079 [Abiotrophia defectiva ATCC 49176] Length = 236 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 103/224 (45%), Positives = 147/224 (65%), Gaps = 1/224 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + I + VA GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDSAYEAIKNIVANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA + V + A RS + VN +WLGGM+TN+KT+ I KL++ E++ + Sbjct: 61 TILFVGTKKQAQEAVKDEAIRSGMFYVNERWLGGMLTNFKTIKSRIAKLKEYEKMSEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + I++ +KL++ L GI++M LPD +FVVD +E++ IQEA L IPI+ Sbjct: 121 FDVLPKKEVIQIKKAWEKLEKNLGGIKEMKKLPDAIFVVDPKKERICIQEAHTLNIPIIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 + DTN +PD + YVIPGNDD+ R++ L +A A I+ + Sbjct: 181 IADTNCDPDELTYVIPGNDDAIRAVRLIVAKMADAVIEANQGEQ 224 >gi|262379486|ref|ZP_06072642.1| ribosomal protein S2 [Acinetobacter radioresistens SH164] gi|262298943|gb|EEY86856.1| ribosomal protein S2 [Acinetobacter radioresistens SH164] Length = 248 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 110/248 (44%), Positives = 157/248 (63%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL +G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A I G S A K+ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKA 240 Query: 240 AGETVVHS 247 + Sbjct: 241 EEAPASEA 248 >gi|257470866|ref|ZP_05634956.1| 30S ribosomal protein S2 [Fusobacterium ulcerans ATCC 49185] gi|317065068|ref|ZP_07929553.1| SSU ribosomal protein S2P [Fusobacterium ulcerans ATCC 49185] gi|313690744|gb|EFS27579.1| SSU ribosomal protein S2P [Fusobacterium ulcerans ATCC 49185] Length = 247 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 160/252 (63%), Gaps = 8/252 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A VI + Sbjct: 1 MAVITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYAVIREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V E A+RS Y VN++WLGGM+TN+ T+ I++L++LE++ Sbjct: 61 AENGGKVLFVGTKKQAQEAVKEQAERSGMYYVNNRWLGGMLTNFATIKTRIERLKELEKM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +TKKE N ++ KL + L GI+DM +P +F+VD +E LAI EA L Sbjct: 121 EADGTLDTAYTKKEAANFRKELVKLSKNLSGIKDMKDVPQAIFIVDCKKETLAIVEAANL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PDLV Y IP NDD+ RS+ L ++A+A I+G G + K Sbjct: 181 GIPVFAMIDTNVDPDLVTYPIPANDDAIRSVKLISSVIANAIIEGNQ------GKEVKEV 234 Query: 241 GETVVHSKEGMQ 252 ++ +EG Sbjct: 235 ASEEINVEEGSA 246 >gi|297568945|ref|YP_003690289.1| ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2] gi|296924860|gb|ADH85670.1| ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2] Length = 255 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 100/255 (39%), Positives = 152/255 (59%), Gaps = 2/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LE+G+ FGH+ WNPKM+ YIF RN +II+L +T+P+ KA D Sbjct: 1 MSHVNMKEMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFNKACDAARDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+GG ILFV TK QA + + E A R + V+ +WLGGM+TN +T+ +S+ +L+ + Sbjct: 61 AAKGGNILFVGTKRQAQEIIREEATRCGMFYVDHRWLGGMLTNHQTIKKSVDRLKAYTSM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L I+++ KL+R L GI++M LP +FVVD RE +A+ EA RL Sbjct: 121 QEDGSINRYKKKEILMIQKETIKLERNLGGIKEMKTLPAAIFVVDPKRESIAVTEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT-KSA 240 IP+ A+ DTN +P+ ++++IPGNDD+ +SI L +A A +DG + A K Sbjct: 181 IPVFAIADTNCDPEGINHLIPGNDDAIKSIRLVSAKLADAILDGKESHTAAQQAAADKQE 240 Query: 241 GETVVHSKEGMQLEE 255 E SKE Sbjct: 241 AEVEAASKEATPAAA 255 >gi|149907553|ref|ZP_01896300.1| 30S ribosomal protein S2 [Moritella sp. PE36] gi|149809223|gb|EDM69152.1| 30S ribosomal protein S2 [Moritella sp. PE36] Length = 242 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 107/234 (45%), Positives = 156/234 (66%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM++YIF R+ HII+L QTVP+ AL I + Sbjct: 1 MSTVSMRDMLQAGVHFGHQTRYWNPKMKQYIFGARSKVHIINLEQTVPLFNDALAFIKNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK A + + EAA Q+ V+ +WLGGM+TNWKTV QSI++L LE Sbjct: 61 ADKKGKVLFVGTKKAAGETIKEAALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLTTLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ KL+++L GI+ MGGLPD++FV+D + E +AI+EA L Sbjct: 121 AQDGTFEQLTKKEALMNTREMIKLEKSLGGIKTMGGLPDVLFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 IP+VA+VDTNSNPD +D+V+PGNDD+ R+I L+ VA+ +G + + Sbjct: 181 IPVVAIVDTNSNPDNIDFVVPGNDDAIRAIKLYAGAVAACVNEGRNQDIAAQAE 234 >gi|332968335|gb|EGK07406.1| 30S ribosomal protein S2 [Kingella kingae ATCC 23330] Length = 241 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 111/225 (49%), Positives = 160/225 (71%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A +V+ Sbjct: 1 MSQVTMRQMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQEVVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 61 VANKGTVLFVGTKRQAREIIKEEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKSAV 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N E G KKE L++ R+ +KL+R+L GI+DM GLPD +FV+DT + + EA +L Sbjct: 121 LANGEASGRNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++AVVDTN++PD V +VIPGNDDS+++I L+C +A A ++G Sbjct: 181 IPVIAVVDTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 225 >gi|261491689|ref|ZP_05988270.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494452|ref|ZP_05990938.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309836|gb|EEY11053.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312642|gb|EEY13764.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 239 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 105/238 (44%), Positives = 158/238 (66%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK AS+ V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 ASNNGKVLFVGTKRAASEAVKLAAVDSQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D +A +G + + + + Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEGRGVETVEVAEEASA 238 >gi|307720320|ref|YP_003891460.1| 30S ribosomal protein S2P [Sulfurimonas autotrophica DSM 16294] gi|306978413|gb|ADN08448.1| SSU ribosomal protein S2P [Sulfurimonas autotrophica DSM 16294] Length = 257 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 150/227 (66%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + ++ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G +LFV TK QA + V +AA V+++WLGGM+TN+ T+ +SI+KL + E+ N Sbjct: 62 GKTVLFVGTKKQARNSVRDAAIACNMPYVDNRWLGGMLTNFPTIQKSIRKLDVITEMQEN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK+DKL++ GIR+M LPD++FVVD +E +A+ EAR L IP+ Sbjct: 122 GQIDLLTKKEALMLSRKKDKLEQYFGGIRNMKKLPDMLFVVDAVKEHIAVLEARCLNIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA +DTN +PDL+ Y IPGNDD+ RSI LFC + +A +G A + + Sbjct: 182 VAPLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTAAINEGKALRDA 228 >gi|169632956|ref|YP_001706692.1| 30S ribosomal protein S2 [Acinetobacter baumannii SDF] gi|169795290|ref|YP_001713083.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE] gi|184158845|ref|YP_001847184.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU] gi|213158045|ref|YP_002320096.1| ribosomal protein S2 [Acinetobacter baumannii AB0057] gi|215482823|ref|YP_002325026.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294] gi|239502457|ref|ZP_04661767.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB900] gi|260554200|ref|ZP_05826457.1| ribosomal protein S2 [Acinetobacter sp. RUH2624] gi|260556753|ref|ZP_05828971.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606] gi|301345999|ref|ZP_07226740.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB056] gi|301513133|ref|ZP_07238370.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB058] gi|301595621|ref|ZP_07240629.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB059] gi|169148217|emb|CAM86080.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE] gi|169151748|emb|CAP00552.1| 30S ribosomal protein S2 [Acinetobacter baumannii] gi|183210439|gb|ACC57837.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU] gi|213057205|gb|ACJ42107.1| ribosomal protein S2 [Acinetobacter baumannii AB0057] gi|213986068|gb|ACJ56367.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294] gi|260404671|gb|EEW98184.1| ribosomal protein S2 [Acinetobacter sp. RUH2624] gi|260410012|gb|EEX03312.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606] gi|322507343|gb|ADX02797.1| rpsB [Acinetobacter baumannii 1656-2] gi|323518758|gb|ADX93139.1| 30S ribosomal protein S2 [Acinetobacter baumannii TCDC-AB0715] Length = 250 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 240 Query: 240 AG 241 Sbjct: 241 DD 242 >gi|118442952|ref|YP_878222.1| 30S ribosomal protein S2 [Clostridium novyi NT] gi|166225264|sp|A0Q0S0|RS2_CLONN RecName: Full=30S ribosomal protein S2 gi|118133408|gb|ABK60452.1| ribosomal protein S2 [Clostridium novyi NT] Length = 233 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 150/230 (65%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSIISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E + RS + VN++WLGGM+TN+KT+ I KL LE++ Sbjct: 61 VADGKEVLFVGTKKQAQEAIEEESLRSGMHFVNNRWLGGMLTNFKTIKTRINKLEQLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 + + KKE + + +++KL++ L GI+++ +F+VD +EK AI EA+ L Sbjct: 121 EEDGTFEVLPKKEVIKLRNEKEKLEKNLGGIKNLDASNLGAIFIVDPRKEKNAIDEAKNL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 GIPVVAIVDTNCDPDEIDYVIPGNDDAIRAVRLITSKIADAIIEGNQGEQ 230 >gi|228015987|gb|ACP50826.1| ribosomal protein S2 [Pinus resinosa] Length = 234 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 133/226 (58%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V A + + VN KWLGGM+TNW T +QK +DL++ N Sbjct: 67 RGKQFLIVGTKYQATDLVASTATEARCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQN 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRALR 232 >gi|253581355|ref|ZP_04858581.1| SSU ribosomal protein S2P [Fusobacterium varium ATCC 27725] gi|251836719|gb|EES65253.1| SSU ribosomal protein S2P [Fusobacterium varium ATCC 27725] Length = 247 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 160/252 (63%), Gaps = 8/252 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A VI + Sbjct: 1 MAVITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYAVIREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V E A+RS Y VN++WLGGM+TN+ T+ I++L++LE++ Sbjct: 61 AENGGKVLFVGTKKQAQEAVKEQAERSGMYYVNNRWLGGMLTNFATIKTRIERLKELEKM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +TKKE N ++ KL + L GI+DM +P +F+VD +E LAI EA L Sbjct: 121 EADGTLDTAYTKKEAANFRKELVKLSKNLSGIKDMKEVPQAIFIVDCKKETLAIVEAANL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PDLV Y IP NDD+ RS+ L ++A+A I+G G + K Sbjct: 181 GIPVFAMIDTNVDPDLVTYPIPANDDAIRSVKLISSVIANAIIEGNQ------GKEVKEV 234 Query: 241 GETVVHSKEGMQ 252 ++ +EG Sbjct: 235 ASDEINVEEGSA 246 >gi|42520395|ref|NP_966310.1| 30S ribosomal protein S2 [Wolbachia endosymbiont of Drosophila melanogaster] gi|61215631|sp|Q73HM1|RS2_WOLPM RecName: Full=30S ribosomal protein S2 gi|42410133|gb|AAS14244.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 282 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 127/271 (46%), Positives = 178/271 (65%), Gaps = 3/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVIS 60 LP+ T+R L ESGV FGH+ WN KM YI+ N HIIDL +T+P+LQ A++ + Sbjct: 4 LPKVTVRDLAESGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQVAMKALY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVAFQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI + G Sbjct: 184 GIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGIESSLAKSGVKIDDI 243 Query: 241 -GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 G+ + KE ++ + S+ + +EV Sbjct: 244 RGDEFIQEKEDGIVQTKRRRSKVYKEEEREV 274 >gi|167586855|ref|ZP_02379243.1| 30S ribosomal protein S2 [Burkholderia ubonensis Bu] Length = 247 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 109/243 (44%), Positives = 163/243 (67%), Gaps = 1/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + + Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAVRGGDDEY 242 Query: 245 VHS 247 V Sbjct: 243 VEE 245 >gi|289662909|ref|ZP_06484490.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670220|ref|ZP_06491295.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 267 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/267 (37%), Positives = 156/267 (58%), Gaps = 1/267 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFS 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 +G + ++ + Sbjct: 241 AEAADEGKGRRAPAKKGEKKADAPAAE 267 >gi|169827153|ref|YP_001697311.1| 30S ribosomal protein S2 [Lysinibacillus sphaericus C3-41] gi|168991641|gb|ACA39181.1| 30S ribosomal protein S2 (BS1) (Vegetative protein 209) (VEG209) [Lysinibacillus sphaericus C3-41] Length = 234 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 96/221 (43%), Positives = 150/221 (67%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV L++A + GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKKYIFVERNGIYIIDLQKTVKKLEEAYDFMRQVGQDGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK QA + + + A+RS Y +N +WLGG +TN+ T+ + + +++ +E++ Sbjct: 61 KVLFVGTKKQAQEAIKDEAERSGNYYINQRWLGGTLTNFGTIQKRVARMKQIEKMEEEGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++ ++L + L GIRDM LPD+MFVVD +E++A+ EAR+L IP+V Sbjct: 121 FEVLPKKEVIQLKKEHERLIKFLGGIRDMHDLPDVMFVVDPRKERIAVAEARKLNIPLVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 181 IVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADALIESKQ 221 >gi|12722424|gb|AAK04068.1| RpS2 [Pasteurella multocida subsp. multocida str. Pm70] Length = 252 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 158/243 (65%), Gaps = 4/243 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +I+ RN HII+L +TVPM +AL ++ Sbjct: 13 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNEALVELTRI 72 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK A++ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 73 AGNNGKILFVGTKRAATEAVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQ 132 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 133 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 192 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G +H + Sbjct: 193 IPVFAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAAAAVKEG---RHQDAVTEENFVA 249 Query: 242 ETV 244 E Sbjct: 250 EAE 252 >gi|171059531|ref|YP_001791880.1| 30S ribosomal protein S2 [Leptothrix cholodnii SP-6] gi|238689084|sp|B1XXJ5|RS2_LEPCP RecName: Full=30S ribosomal protein S2 gi|170776976|gb|ACB35115.1| ribosomal protein S2 [Leptothrix cholodnii SP-6] Length = 248 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 106/247 (42%), Positives = 156/247 (63%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 FT+R++LE+GV FGH+ WNPKM YIF RN HII+L +TVP+ +A + Sbjct: 2 SFTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTVPLFNEATKYARQLAG 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + G ILFV TK QA D V A R+ V ++WLGGM+TN+KTV S++KL++++ + Sbjct: 62 KRGTILFVGTKRQARDVVAMEAARAGMPFVETRWLGGMLTNFKTVKGSLKKLKEMQAQVE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 Q KKE L +R+ KL++ + GI+DM LPD +FV+D K+AI EA++L IP+ Sbjct: 122 AGTQPAIKKEALMFQREIAKLEKDIGGIQDMNALPDALFVIDVGFHKIAIAEAKKLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + VVDTN +P +DYVIPGNDDS++++AL+ ++A A I+G A + + A + Sbjct: 182 IGVVDTNHSPVGIDYVIPGNDDSAKAVALYARVMADAIIEGKANSLNEVVEAAAGASDEF 241 Query: 245 VHSKEGM 251 V + Sbjct: 242 VEVSDPA 248 >gi|161723148|ref|YP_442551.2| 30S ribosomal protein S2 [Burkholderia thailandensis E264] gi|167581478|ref|ZP_02374352.1| 30S ribosomal protein S2 [Burkholderia thailandensis TXDOH] gi|167619588|ref|ZP_02388219.1| 30S ribosomal protein S2 [Burkholderia thailandensis Bt4] gi|257138760|ref|ZP_05587022.1| 30S ribosomal protein S2 [Burkholderia thailandensis E264] gi|209573712|sp|Q2SWZ8|RS2_BURTA RecName: Full=30S ribosomal protein S2 Length = 246 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAVRGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|33862857|ref|NP_894417.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9313] gi|61215702|sp|Q7V7Z4|RS2_PROMM RecName: Full=30S ribosomal protein S2 gi|33634773|emb|CAE20759.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9313] Length = 239 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAICMNNAYKWTRSS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEATRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEASVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + GAD Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEGRHGTNDQRGAD 235 >gi|194289792|ref|YP_002005699.1| 30S ribosomal protein s2 [Cupriavidus taiwanensis LMG 19424] gi|229470512|sp|B3R2B7|RS2_CUPTR RecName: Full=30S ribosomal protein S2 gi|193223627|emb|CAQ69634.1| 30S ribosomal subunit protein S2 [Cupriavidus taiwanensis LMG 19424] Length = 247 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 107/247 (43%), Positives = 161/247 (65%), Gaps = 2/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+G FGH+ WNPKM +IF RN HII+L +T+PM Q A++ + A Sbjct: 2 SVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ V+++WLGGM+TN+KTV SI++L+D+E Sbjct: 62 NRGTILFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L ER+ KL++++ GI++MGG+PD +FVVD K+A+ EA +L IP Sbjct: 122 AGALETMSKKEALMFEREMIKLEKSIGGIKEMGGVPDAIFVVDVGYHKIAVTEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ +DYVIPGNDDSS+++AL+ VA A ++G A + + + Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEV-VEAARGDDE 240 Query: 244 VVHSKEG 250 V +EG Sbjct: 241 FVEVQEG 247 >gi|224372497|ref|YP_002606869.1| 30S ribosomal protein S2 [Nautilia profundicola AmH] gi|223588781|gb|ACM92517.1| ribosomal protein S2 [Nautilia profundicola AmH] Length = 279 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 108/253 (42%), Positives = 161/253 (63%), Gaps = 6/253 (2%) Query: 3 LP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +P T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ ++ A V+ + Sbjct: 1 MPCNVTMKDLLECGVHFGHQKRRWNPKMKKYIFGVRKNIYIIDLQKTLRHIKYAYNVVKN 60 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 G ILFV TK QA D + E A+R VN +WLGGM+TN+KT+ +SI+KL +E+ Sbjct: 61 AAEEGKTILFVGTKKQAIDAIKEHAERCGMPYVNHRWLGGMLTNFKTIQKSIRKLEIIEK 120 Query: 122 LLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + TKKERL + R++ KL++ + GIR M +PD++F++DT +EK+A+ EA +L Sbjct: 121 MEETGQINLLTKKERLILARRKAKLEKFIGGIRHMKTIPDMLFIIDTVKEKIAVGEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVA VDTN +PDL+D IPGNDD+ RS+ LFC +A A I+G + + Sbjct: 181 GLPIVAPVDTNCDPDLIDVPIPGNDDAIRSVNLFCKTIADAIIEG----KELAAKEEEGE 236 Query: 241 GETVVHSKEGMQL 253 E + + ++ Sbjct: 237 VEPITQEEIAEEV 249 >gi|300743953|ref|ZP_07072973.1| ribosomal protein S2 [Rothia dentocariosa M567] gi|311113203|ref|YP_003984425.1| 30S ribosomal protein S2 [Rothia dentocariosa ATCC 17931] gi|300380314|gb|EFJ76877.1| ribosomal protein S2 [Rothia dentocariosa M567] gi|310944697|gb|ADP40991.1| 30S ribosomal protein S2 [Rothia dentocariosa ATCC 17931] Length = 264 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 105/233 (45%), Positives = 162/233 (69%), Gaps = 2/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+R++L+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + KA + + T Sbjct: 1 MPVVTMREMLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSLEFIDKAFEAVKST 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A R VN +WLGGM+TN+ T+++SI+++++LE++ Sbjct: 61 VAHGGNILFVGTKKQAQEVIAEQATRVNMPYVNHRWLGGMLTNFSTIAKSIERMKELEQI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L + R+ +KL++ L GIR++ +P L++VVDT +E LA+ EA++L Sbjct: 121 DFDDVAGSRYTKKELLLMRREFEKLEKTLGGIRNLSKVPSLVWVVDTKKEHLAVNEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP+VA++DTN +PD V + IPGNDD+ RS+ L +VA A G+ +++ Sbjct: 181 GIPVVAILDTNCDPDEVAFPIPGNDDAIRSVNLLTRVVADAVAAGLIERNAKK 233 >gi|325267206|ref|ZP_08133872.1| 30S ribosomal protein S2 [Kingella denitrificans ATCC 33394] gi|324981339|gb|EGC16985.1| 30S ribosomal protein S2 [Kingella denitrificans ATCC 33394] Length = 249 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 164/227 (72%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A +V+ Sbjct: 10 MSQITMRQMIEAGVHFGHQTRYWNPKMAQYIFGVRNKIHIINLEKTVPLFQEAQEVVRRL 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + E A+R+ V+ +WLGGM+TN+KTV QSI++L + + Sbjct: 70 VANKGTVLFVGTKRQARDIIKEEAQRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKAAV 129 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N E G+ KKE L++ R+ +KL+R+L GI+DM GLPD +FV+DT + + EA +L Sbjct: 130 LANAETSGYNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLG 189 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVD+N++PDLV ++IPGNDDS+++I L+C +A A ++G + Sbjct: 190 IPVIAVVDSNNSPDLVKHIIPGNDDSAKAIRLYCRGIADAVLEGKNQ 236 >gi|257413749|ref|ZP_04744070.2| ribosomal protein S2 [Roseburia intestinalis L1-82] gi|257202443|gb|EEV00728.1| ribosomal protein S2 [Roseburia intestinalis L1-82] gi|291538528|emb|CBL11639.1| SSU ribosomal protein S2P [Roseburia intestinalis XB6B4] Length = 242 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 94/219 (42%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A + +SD A GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYKAVSDIAAAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA D + A+R + VN +WLGGM+TN++T+ I +L+++E + + Sbjct: 61 TILFVGTKKQAQDAIKTEAERCGMFYVNERWLGGMLTNFRTIQSRIARLKEIETMATDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++ +KL++ L GI++M +PD +FVVD +E++ IQEA L I ++ Sbjct: 121 FEVLPKKEVIALKKEWEKLEKNLGGIKEMKKIPDAIFVVDPKKERICIQEAHTLGIKLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTN +P+ +DYVIPGNDD+ R++ L +A A I+ Sbjct: 181 IADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEA 219 >gi|167756896|ref|ZP_02429023.1| hypothetical protein CLORAM_02445 [Clostridium ramosum DSM 1402] gi|167703071|gb|EDS17650.1| hypothetical protein CLORAM_02445 [Clostridium ramosum DSM 1402] Length = 304 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 95/242 (39%), Positives = 148/242 (61%), Gaps = 1/242 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + A + +++ Sbjct: 17 TMSVISMKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLQKSSKKIDDAYKAMNE 76 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 A+GG++LFV TK QA + V E A RS + VNS+WLGG +TN+KT+ + I++L +LE+ Sbjct: 77 IAAKGGKVLFVGTKKQAQEAVKEEAIRSESFYVNSRWLGGTLTNFKTIQKRIRRLIELEK 136 Query: 122 LL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++++ KL++ L GI++M LP+ +FVVD E A+ EA+ L Sbjct: 137 MEADGTFDLLPKKEVILLKKEAAKLEKNLGGIKEMRRLPNALFVVDPKAEHNAVAEAKIL 196 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ +VDTN +PD VDYVIP NDD+ R++ L +A A + + + Sbjct: 197 GIPVFGIVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADAICEAKNEPLTVAYVKDEDD 256 Query: 241 GE 242 E Sbjct: 257 KE 258 >gi|124023366|ref|YP_001017673.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9303] gi|166225295|sp|A2CA98|RS2_PROM3 RecName: Full=30S ribosomal protein S2 gi|123963652|gb|ABM78408.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9303] Length = 239 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAICMNNAYKWTRSS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEATRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEASVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + GAD Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEGRHGTNEQRGAD 235 >gi|237688516|ref|YP_002905134.1| ribosomal protein S2 [Pinus contorta] gi|226875345|gb|ACO89083.1| ribosomal protein S2 [Pinus contorta] gi|228015918|gb|ACP50758.1| ribosomal protein S2 [Pinus ponderosa] gi|228016438|gb|ACP51270.1| ribosomal protein S2 [Pinus torreyana subsp. insularis] gi|228016502|gb|ACP51333.1| ribosomal protein S2 [Pinus torreyana subsp. torreyana] gi|228016937|gb|ACP51761.1| ribosomal protein S2 [Pinus banksiana] Length = 234 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 133/226 (58%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + VN KWLGGM+TNW T +QK +DL++ + Sbjct: 67 RGKQFLIVGTKYQATDLVASAATEGRCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRALR 232 >gi|319762175|ref|YP_004126112.1| ribosomal protein s2 [Alicycliphilus denitrificans BC] gi|330826013|ref|YP_004389316.1| 30S ribosomal protein S2 [Alicycliphilus denitrificans K601] gi|317116736|gb|ADU99224.1| ribosomal protein S2 [Alicycliphilus denitrificans BC] gi|329311385|gb|AEB85800.1| ribosomal protein S2 [Alicycliphilus denitrificans K601] Length = 250 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 102/246 (41%), Positives = 158/246 (64%), Gaps = 1/246 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA + V E A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 62 NRGTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP+ Sbjct: 122 AGLESMSKKEQLMFSRELEKLEKDIGGIQDMNALPDAIFVIDVGYHKIAVAEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 + VVD+N +P+ +DYVIPGNDDS++++AL+ +A A ++G A + + A + Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGRANAVNDVVKAAAGEGSDE 241 Query: 244 VVHSKE 249 V E Sbjct: 242 FVEVDE 247 >gi|323526488|ref|YP_004228641.1| 30S ribosomal protein S2 [Burkholderia sp. CCGE1001] gi|323383490|gb|ADX55581.1| ribosomal protein S2 [Burkholderia sp. CCGE1001] Length = 250 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 163/243 (67%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GETERMSKKEALLFEREMLKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A + + A G+ Sbjct: 183 IAVVDTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGRANAVNEVVQAARGDDGDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|225677377|ref|ZP_03788347.1| ribosomal protein S2 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590585|gb|EEH11842.1| ribosomal protein S2 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 282 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 128/271 (47%), Positives = 179/271 (66%), Gaps = 3/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVIS 60 LP+ T+R L ESGV FGH+ WN KM YI+ N HIIDL +T+P+LQ A++ + Sbjct: 4 LPKVTVRDLAESGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQVAMKALY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D V +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVVFQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI + G Sbjct: 184 GIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGIESSLAKSGVKIDDI 243 Query: 241 -GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 G+ + KE ++ + S+ + +EV Sbjct: 244 RGDEFIQEKEDGIVQTKRRRSKVYKEEEREV 274 >gi|170692142|ref|ZP_02883305.1| ribosomal protein S2 [Burkholderia graminis C4D1M] gi|170142572|gb|EDT10737.1| ribosomal protein S2 [Burkholderia graminis C4D1M] Length = 250 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 163/243 (67%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A + + A G+ Sbjct: 183 IAVVDTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGRANAVNEVVQAARGDDGDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|67458461|ref|YP_246085.1| 30S ribosomal protein S2 [Rickettsia felis URRWXCal2] gi|75537069|sp|Q4UND8|RS2_RICFE RecName: Full=30S ribosomal protein S2 gi|67003994|gb|AAY60920.1| 30S ribosomal protein S2 [Rickettsia felis URRWXCal2] Length = 295 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 131/271 (48%), Positives = 184/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 IPSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNTIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G+ILFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G+TKKE L++ RK++KL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENEEALMGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD V+Y IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVNYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GE---TVVHSKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 244 QEHTDKALTSKNVSKLKQAKKFSKTKNIDEE 274 >gi|299769325|ref|YP_003731351.1| 30S ribosomal protein S2 [Acinetobacter sp. DR1] gi|298699413|gb|ADI89978.1| 30S ribosomal protein S2 [Acinetobacter sp. DR1] gi|325122880|gb|ADY82403.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus PHEA-2] Length = 250 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 240 Query: 240 AG 241 Sbjct: 241 DD 242 >gi|167032159|ref|YP_001667390.1| 30S ribosomal protein S2 [Pseudomonas putida GB-1] gi|189045003|sp|B0KS99|RS2_PSEPG RecName: Full=30S ribosomal protein S2 gi|166858647|gb|ABY97054.1| ribosomal protein S2 [Pseudomonas putida GB-1] Length = 245 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 148/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R +L++GV FGH+ WNPKM +YIF RN HII+L +T+PM AL + Sbjct: 1 MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALAFVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +I+FV TK A V E A R+ V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 AQGKNKIMFVGTKRSAGKIVAEQAARAGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 AEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAIIRGR 225 >gi|88855241|ref|ZP_01129906.1| 30S ribosomal protein S2 [marine actinobacterium PHSC20C1] gi|88815769|gb|EAR25626.1| 30S ribosomal protein S2 [marine actinobacterium PHSC20C1] Length = 347 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 109/250 (43%), Positives = 164/250 (65%), Gaps = 3/250 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TIRQLL+SGV FGH+ WNPKM+R+I ER+ +HIIDL Q++ + + +T Sbjct: 1 MAVVTIRQLLDSGVHFGHQTRRWNPKMKRFILTERSGSHIIDLQQSLAHIDATYDYVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + E A R Q VN +WLGG++TN++TVS+ + ++++LEE+ Sbjct: 61 VAHGGTILFVGTKKQAQGTIAEQALRVGQPYVNQRWLGGLLTNFQTVSKRLARMKELEEV 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +GFTKKE L +R+ KL+++L GIR++ P +++VDT +E LAI EA +L Sbjct: 121 DFDDTTRGFTKKELLIQKRELVKLQKSLGGIRNLTKTPSAIWIVDTKKEHLAIDEAHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD V Y IPGNDD+ RS+ L +VA AA +G+ ++H + Sbjct: 181 IPVIAILDTNCDPDDVAYPIPGNDDAIRSVGLLTRIVADAAAEGLIQRHQKP--EEGKEV 238 Query: 242 ETVVHSKEGM 251 E + + + Sbjct: 239 EPMAAWEAEL 248 >gi|192361500|ref|YP_001981606.1| 30S ribosomal protein S2 [Cellvibrio japonicus Ueda107] gi|238692420|sp|B3PBP6|RS2_CELJU RecName: Full=30S ribosomal protein S2 gi|190687665|gb|ACE85343.1| ribosomal protein S2 [Cellvibrio japonicus Ueda107] Length = 246 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 111/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ ++R +L +GV FGH+ WNPKM +YIF RN HII+L TVP +AL +I+ Sbjct: 1 MPQVSMRDMLSAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNEALNLITQM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 A+ +ILFV TK A + E A+R+ Q V+ +WLGGM+TN+KT+ SI++L D + Sbjct: 61 AAQKKKILFVGTKRAAQKTIKEQAERAGQPFVSHRWLGGMLTNYKTIRASIRRLSDLTTQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+R++ GI+ MGGLPD MFV+D E++AIQEA +L Sbjct: 121 SQDGTFAKLTKKEALMRSRDMEKLERSIGGIKGMGGLPDAMFVIDVEHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P+ +DYVIPGNDD+ R+I L+ +A A ++G S D A Sbjct: 181 IPVIGVVDTNSSPEGIDYVIPGNDDAIRAIKLYATAIADACLEGSKSSASVPNKDEYVAA 240 Query: 242 ET 243 E Sbjct: 241 ED 242 >gi|295676825|ref|YP_003605349.1| ribosomal protein S2 [Burkholderia sp. CCGE1002] gi|295436668|gb|ADG15838.1| ribosomal protein S2 [Burkholderia sp. CCGE1002] Length = 250 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 111/243 (45%), Positives = 163/243 (67%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLASN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L IP+ Sbjct: 123 GETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ VDYVIPGNDD+S+++AL+ VA A ++G A + + A G+ Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDASKAVALYAAGVADAILEGRANAVNEVVQAARGGDGDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|66769169|ref|YP_243931.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. 8004] gi|188992317|ref|YP_001904327.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. B100] gi|81304871|sp|Q4USR2|RS2_XANC8 RecName: Full=30S ribosomal protein S2 gi|229559898|sp|B0RW65|RS2_XANCB RecName: Full=30S ribosomal protein S2 gi|66574501|gb|AAY49911.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. 8004] gi|167734077|emb|CAP52283.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris] Length = 275 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 102/248 (41%), Positives = 154/248 (62%), Gaps = 2/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA-DTKSA 240 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + + + Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFS 240 Query: 241 GETVVHSK 248 E K Sbjct: 241 AEAGDEGK 248 >gi|315635026|ref|ZP_07890307.1| 30S ribosomal protein S2 [Aggregatibacter segnis ATCC 33393] gi|315476288|gb|EFU67039.1| 30S ribosomal protein S2 [Aggregatibacter segnis ATCC 33393] Length = 240 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 158/240 (65%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM AL ++ Sbjct: 1 MAQVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNAALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK A+D V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAATDAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI++MGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ +A +G + + ++A Sbjct: 181 IPVFAIVDTNSSPDGVDFVIPGNDDAARAIQLYLSSAVAAIKEGRGNEEAVAEELAQAAE 240 >gi|11466379|ref|NP_038382.1| ribosomal protein S2 [Mesostigma viride] gi|14548251|sp|Q9MUS8|RR2_MESVI RecName: Full=30S ribosomal protein S2, chloroplastic gi|7259522|gb|AAF43823.1|AF166114_35 ribosomal protein S2 [Mesostigma viride] Length = 228 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 95/226 (42%), Positives = 137/226 (60%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++E+GV FGH+ WNPKM YI+ RN H+IDL QT +L +A + + Sbjct: 1 MKSVGLEEMMEAGVHFGHQTRGWNPKMSSYIYGNRNGIHLIDLVQTARLLSEACDFLFNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TKSQASD + A R+ + VN +WLGGM+TNW T+ I+KL+DLE+ Sbjct: 61 AKEGKEFLFVGTKSQASDIIASEALRAESHYVNQRWLGGMLTNWSTIKTRIRKLKDLEQK 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KKE ++R+ KL++ L G++DM LPD++ +VD RE A++E +L Sbjct: 121 EKNGILDTLPKKEAAVLKRQLYKLRKYLSGLQDMKYLPDVVIIVDQKREINAVKECIKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP +++VDTN +P L D IP NDD+ RSI L +A A +G Sbjct: 181 IPTISLVDTNCDPTLADLPIPANDDAIRSINLLVSKLADAIYEGQR 226 >gi|167837041|ref|ZP_02463924.1| 30S ribosomal protein S2 [Burkholderia thailandensis MSMB43] Length = 247 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 108/243 (44%), Positives = 162/243 (66%), Gaps = 1/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G + + + + Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRTNAVNEVVQAVRGGDDEY 242 Query: 245 VHS 247 V Sbjct: 243 VEE 245 >gi|309799233|ref|ZP_07693482.1| ribosomal protein S2 [Streptococcus infantis SK1302] gi|308117167|gb|EFO54594.1| ribosomal protein S2 [Streptococcus infantis SK1302] Length = 260 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 162/257 (63%), Gaps = 9/257 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAVAAVEAEFAA 240 Query: 242 --------ETVVHSKEG 250 E +V EG Sbjct: 241 SEAQADSIEEIVEVVEG 257 >gi|75497578|sp|Q5GRH8|RS2_WOLTR RecName: Full=30S ribosomal protein S2 gi|58419381|gb|AAW71396.1| Ribosomal protein S2 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 284 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 126/281 (44%), Positives = 177/281 (62%), Gaps = 3/281 (1%) Query: 1 MA-LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQ 57 MA LP+ T+R L SGV FGH+ WN KM YI+ N HIIDL +T+P+LQ A++ Sbjct: 3 MANLPEVTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMK 62 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 V+ + +GGRILFV TK QA D + A R QY VN +WLGGM+TNW T+S SI+ L Sbjct: 63 VLYNVAFQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTISSSIKTLV 122 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E++LN EN TKKE NIE+KR KL +AL GIR+MG +PD++F++DTN+E +A++EA Sbjct: 123 QYEKVLNAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDTNKEHIAVKEA 182 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 +L IP+VA++DTNS+PD + Y IPGNDDS +SI L+C L A + + G+ + G Sbjct: 183 EKLEIPVVAILDTNSDPDGITYPIPGNDDSRKSIELYCRLAADSILAGMESSLARSGVKV 242 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + ++G + + + ++ V E S Sbjct: 243 GDIKDEEFIQEKGDSIIRTKKGRSKVYKEDEKEVVTNEDES 283 >gi|289168889|ref|YP_003447158.1| 30S ribosomal protein S2 [Streptococcus mitis B6] gi|307707874|ref|ZP_07644351.1| ribosomal protein S2 [Streptococcus mitis NCTC 12261] gi|307710338|ref|ZP_07646779.1| ribosomal protein S2 [Streptococcus mitis SK564] gi|288908456|emb|CBJ23298.1| 30S ribosomal protein S2 [Streptococcus mitis B6] gi|307616134|gb|EFN95330.1| ribosomal protein S2 [Streptococcus mitis NCTC 12261] gi|307618930|gb|EFN98065.1| ribosomal protein S2 [Streptococcus mitis SK564] Length = 259 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 160/250 (64%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 241 EAQADSIEEI 250 >gi|268679047|ref|YP_003303478.1| ribosomal protein S2 [Sulfurospirillum deleyianum DSM 6946] gi|268617078|gb|ACZ11443.1| ribosomal protein S2 [Sulfurospirillum deleyianum DSM 6946] Length = 263 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 113/264 (42%), Positives = 166/264 (62%), Gaps = 3/264 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+++IF ER N +I+DL +T+ + V+ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKFIFGERKNIYIVDLQKTLRYFRYTYNVVKDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +LFV TK QAS + E A++ VN +WLGGM+TN++T+ QSI+KL +E++ + Sbjct: 62 GKTMLFVGTKKQASQAIKEYAEKCGMPYVNHRWLGGMLTNYQTIRQSIRKLDIIEKMEED 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL L GIR+M LPD++FV+DT +EK+A+QEARRL I + Sbjct: 122 GQIDLLTKKEALMLRRKKEKLLDYLGGIRNMKNLPDMIFVIDTVKEKIAVQEARRLGITV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VD IPGNDD+ RSI LFC + A +G + + A + Sbjct: 182 VAPLDTNCDPDMVDLPIPGNDDAIRSIQLFCKEMCEAMTEGYEIRSKDAPVEQDVA--EI 239 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 ++ L+E + SV +G+ Sbjct: 240 SEEEKKEILDEAISEEDVSVEEGE 263 >gi|325983646|ref|YP_004296048.1| 30S ribosomal protein S2 [Nitrosomonas sp. AL212] gi|325533165|gb|ADZ27886.1| ribosomal protein S2 [Nitrosomonas sp. AL212] Length = 239 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 112/239 (46%), Positives = 157/239 (65%), Gaps = 2/239 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM YIF RN HII+L +T+ M ++A++ I A Sbjct: 2 SVTMRQMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLVMYEEAMKYIRQLSA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 G ILFV TK QA D V E A R V+ +WLGGM+TN+KT+ QSI++L+D+E ++ Sbjct: 62 NKGVILFVGTKRQARDIVREEAMRCGSPYVDQRWLGGMLTNFKTIKQSIKRLQDMENMVQ 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE L+++R+ DKL +L GI+DM GLPD +FV+D +K AI EAR+L IP Sbjct: 122 DGTLDKLVKKEALDLQRELDKLNSSLGGIKDMKGLPDALFVIDVGYQKGAITEARKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 ++ VVDTN NPD + Y+IPGNDDSSR+I L+ A A ++G + + + + E Sbjct: 182 VIGVVDTNHNPDNLHYIIPGNDDSSRAIRLYARGAADAILEGRNQAIQEI-VEMTAEAE 239 >gi|239617911|ref|YP_002941233.1| ribosomal protein S2 [Kosmotoga olearia TBF 19.5.1] gi|239506742|gb|ACR80229.1| ribosomal protein S2 [Kosmotoga olearia TBF 19.5.1] Length = 275 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 90/226 (39%), Positives = 147/226 (65%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGHR WNPKM+ YI+ ER +IIDL +T+ +L + + + Sbjct: 1 MAVVTMKQLLEAGVHFGHRTRRWNPKMKPYIYGERKGIYIIDLQKTLKLLDQTYDYVRER 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +FV TK QA + AKR VN++WLGG++TN+ T+ + I+ L+ EE+ Sbjct: 61 AREGATFMFVGTKRQAQQIIENEAKRCGAAYVNNRWLGGLLTNFTTIRKRIEVLKQYEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ E KKE+ I +K +KL++ L+G++DM +PD+++VVD +E++A+ EA +L Sbjct: 121 EISGELDALPKKEQSRIRKKLEKLRKNLNGVKDMERIPDVIYVVDPKKEEIAVAEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ + DTN +PD++DY++PGNDD+ R+I L +A A ++G Sbjct: 181 ITVIGIADTNCDPDVLDYLVPGNDDAIRAIQLITRTIADAILEGRE 226 >gi|325962759|ref|YP_004240665.1| 30S ribosomal protein S2P [Arthrobacter phenanthrenivorans Sphe3] gi|323468846|gb|ADX72531.1| SSU ribosomal protein S2P [Arthrobacter phenanthrenivorans Sphe3] Length = 285 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 109/251 (43%), Positives = 170/251 (67%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL+SGV FGH+ WNPKM+R+IF ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + E A R Q VN +WLGGM+TN++TV++ IQ++++LEE+ Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQATRVGQPYVNQRWLGGMLTNFQTVAKRIQRMKELEEI 120 Query: 123 LNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G +TKKE L ++R+ KL+ L GIR++ P ++++VDT +E LA+ EA++L Sbjct: 121 DFDDVAGSAYTKKELLLLKRELTKLESNLGGIRNLTKAPSVLWIVDTKKEHLAVDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L +VA A +G+ +++ ++ Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVVADAVAEGLIARNNRGTGAAEAP 240 Query: 241 GETVVHSKEGM 251 E + + + Sbjct: 241 EEPLAEWEREL 251 >gi|50954905|ref|YP_062193.1| 30S ribosomal protein S2 [Leifsonia xyli subsp. xyli str. CTCB07] gi|61215512|sp|Q6AEV7|RS2_LEIXX RecName: Full=30S ribosomal protein S2 gi|50951387|gb|AAT89088.1| 30S ribosomal protein S2 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 298 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 115/277 (41%), Positives = 178/277 (64%), Gaps = 2/277 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SGV FGH+ WNPKM+R+I ER+ ++IIDL Q++ + K + +T Sbjct: 1 MAVVTMRQLLDSGVHFGHQTRRWNPKMKRFILTERSGSYIIDLQQSLTYIDKTYDFVRET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + E A R Q VN +WLGG++TN++TVS+ + ++++LEEL Sbjct: 61 VAHGGTILFVGTKKQAQQAIAEQATRVGQPYVNQRWLGGLLTNFQTVSKRLARMKELEEL 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 GFTKKE L +R+ DKL ++L GIR++ P ++VVDT +E LAI EA++L Sbjct: 121 DFEGTTSGFTKKELLIKKRELDKLHKSLGGIRNLSKTPSALWVVDTKKEHLAIDEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A++DTN +PD V Y IPGNDD+ RS++L +VA AA +G+ ++H ++A Sbjct: 181 IPVIAILDTNCDPDEVQYPIPGNDDAIRSVSLLTHIVADAAAEGLIQRHQKPEEGVEAA- 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E + ++ + + ++ S+ + A + E + Sbjct: 240 EPLAEWEQELLAQPAAEVQASAETEKAADADLAEAKA 276 >gi|332850397|ref|ZP_08432717.1| ribosomal protein S2 [Acinetobacter baumannii 6013150] gi|332871836|ref|ZP_08440259.1| ribosomal protein S2 [Acinetobacter baumannii 6013113] gi|332875272|ref|ZP_08443104.1| ribosomal protein S2 [Acinetobacter baumannii 6014059] gi|332730668|gb|EGJ61979.1| ribosomal protein S2 [Acinetobacter baumannii 6013150] gi|332731165|gb|EGJ62465.1| ribosomal protein S2 [Acinetobacter baumannii 6013113] gi|332736529|gb|EGJ67524.1| ribosomal protein S2 [Acinetobacter baumannii 6014059] Length = 267 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 18 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 78 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 137 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 138 TQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 197 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 198 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 257 Query: 240 AG 241 Sbjct: 258 DD 259 >gi|258591442|emb|CBE67743.1| 30S ribosomal protein S2 [NC10 bacterium 'Dutch sediment'] Length = 262 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 162/257 (63%), Gaps = 1/257 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + TI++LLE+G+ FGH+ WNPKM++++F E+N +IIDL +T+ +A+ + D Sbjct: 1 MVTVTIKELLEAGIHFGHQTKRWNPKMKKFLFGEQNGIYIIDLQKTLKKFHEAIAFVRDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G ++FV TK QA+D + + A R Q+ VN +WLGG +TN++T+ +S+ +LR +EE+ Sbjct: 61 AEQGLPVVFVGTKKQAADVMEQEANRCEQFFVNHRWLGGTLTNFQTIRKSVGRLRHIEEM 120 Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K E + TKKE ++R+R KL+ L GI+ M LP +FV+DT +E++A+ EARRL Sbjct: 121 EAKGECERLTKKEIAGLQRERQKLEYTLGGIKGMERLPGAIFVIDTKKERIAVCEARRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +PD VDY IPGNDD+ R+I L +A + A + + Sbjct: 181 IPVVAVVDTNCDPDEVDYPIPGNDDAIRAIRLMAGRMADVIQESRAARMKAAEDMAAAQA 240 Query: 242 ETVVHSKEGMQLEEDSQ 258 E+ S++ E + Sbjct: 241 ESAPSSEDMGPTEAPLE 257 >gi|307729331|ref|YP_003906555.1| 30S ribosomal protein S2 [Burkholderia sp. CCGE1003] gi|307583866|gb|ADN57264.1| ribosomal protein S2 [Burkholderia sp. CCGE1003] Length = 250 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 163/243 (67%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GETERMSKKEALLFEREMLKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A + + A G+ Sbjct: 183 IAVVDTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGRANAVNEVVQAARGDDGDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|262375514|ref|ZP_06068747.1| ribosomal protein S2 [Acinetobacter lwoffii SH145] gi|262309768|gb|EEY90898.1| ribosomal protein S2 [Acinetobacter lwoffii SH145] Length = 248 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 109/248 (43%), Positives = 156/248 (62%), Gaps = 1/248 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM YIF RN HII+L TVP L AL + Sbjct: 1 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRDYIFGARNKIHIINLEHTVPALNDALNFAN 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 + ++ ++LFV TK AS + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 61 NLASKKNKVLFVGTKRAASAIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 121 TQSQDGTFAKLTKREALERTREMEKLERGLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K+ Sbjct: 181 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKA 240 Query: 240 AGETVVHS 247 + Sbjct: 241 EEAPASEA 248 >gi|311114691|ref|YP_003985912.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14019] gi|310946185|gb|ADP38889.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14019] Length = 266 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 108/266 (40%), Positives = 168/266 (63%), Gaps = 2/266 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS +++L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVSERWLGGMLTNFQTVSTRVKRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R + L L+A A +G+ + S Sbjct: 181 GIPVVAIVDTNTDPDSVEYPIPANDDAIRGVELLTSLMADAVAEGLLERAGKGAKSEGSD 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 + + ++ + +E QS + + + Sbjct: 241 AQPMAAWEKELLTKETEQSEDEAKAE 266 >gi|294790923|ref|ZP_06756081.1| ribosomal protein S2 [Scardovia inopinata F0304] gi|294458820|gb|EFG27173.1| ribosomal protein S2 [Scardovia inopinata F0304] Length = 299 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 113/281 (40%), Positives = 175/281 (62%), Gaps = 6/281 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ Q+L +GV FGH+ WNPKM+++I ERN HII+L +++ M+ A I +T Sbjct: 1 MAQITMSQMLNAGVHFGHQTRRWNPKMKQFILMERNGIHIINLFKSLDMIDAAYTFIKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QAS+ + A R V+ +WLGGM+TN++TVS+ + ++++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQASEAIAAEATRVGMPYVSERWLGGMLTNFQTVSKRVARMKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L +ER++DKL + L GIR M P +FVVD N+E LA++EA +L Sbjct: 121 DFSDVRSSGLTKKELLLLEREKDKLVKQLGGIRTMNRTPSALFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD---T 237 IP+VA+VDTN +PD VDY IP NDD+ R + L L+A A +G+ + G D Sbjct: 181 NIPVVALVDTNCDPDSVDYAIPANDDAIRGVRLLTSLMADAVAEGLLARSGKAGKDDTGA 240 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 ++ + + ++ + ++ ++ E+ D E A P+ S Sbjct: 241 DASAQPMAEWEKDLLTQDKTEDKENKSEDKTEKA-DPDKES 280 >gi|290487140|gb|ADD29954.1| ribosomal protein S2 [Ehretia acuminata] Length = 236 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAR 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLFRLQTYLGGIQYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|254519199|ref|ZP_05131255.1| ribosomal protein S2 [Clostridium sp. 7_2_43FAA] gi|226912948|gb|EEH98149.1| ribosomal protein S2 [Clostridium sp. 7_2_43FAA] Length = 233 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 98/230 (42%), Positives = 145/230 (63%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYNFIKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + + E A RS + VN++WLGGM+TN+KT+ I +L L+ + Sbjct: 61 AAEGKDILFVGTKKQAQEAIEEEAIRSNMHFVNNRWLGGMLTNFKTIKTRINRLETLKTM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 + + KKE + ++ + +KL++ L GI+++ +FVVD +EK AI EA+ L Sbjct: 121 EEDGTFEVLPKKEVIKLKGEMEKLEKNLGGIKNLDSTNIGAIFVVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+V +VDTN +P+ VDYVIPGNDD+ R++ L +A I+G + Sbjct: 181 GIPVVGIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKIADGIIEGRQGEQ 230 >gi|325923979|ref|ZP_08185568.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865] gi|325545562|gb|EGD16827.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865] Length = 279 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 103/248 (41%), Positives = 155/248 (62%), Gaps = 2/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G ILF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA-DTKSA 240 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + + + Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFS 240 Query: 241 GETVVHSK 248 E+ K Sbjct: 241 AESADEGK 248 >gi|242278737|ref|YP_002990866.1| ribosomal protein S2 [Desulfovibrio salexigens DSM 2638] gi|259494994|sp|C6C1T1|RS2_DESAD RecName: Full=30S ribosomal protein S2 gi|242121631|gb|ACS79327.1| ribosomal protein S2 [Desulfovibrio salexigens DSM 2638] Length = 259 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 113/259 (43%), Positives = 172/259 (66%), Gaps = 3/259 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++Q+LE+GV FGH+ WNPKM YIF RN HI+DL QTV + +KA I+D Sbjct: 1 MAYVTMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKLFRKAHDFIADN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG++LF+ TK QA + + A R+ + V +W+GG +TN++T+ +SI +L+ LEE+ Sbjct: 61 VAKGGKVLFIGTKRQAQEAIAAEASRAGMFHVTHRWMGGTLTNFQTIKKSIDRLKKLEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + F KKE + + R+ KL AL GI+D+ G P + FV+D RE++AIQE R+L Sbjct: 121 FEDGSIKRFPKKEIVMMGREVKKLNLALGGIKDLNGAPAVAFVIDPKREQIAIQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS--YMGADTKS 239 IP+VAVVD+N +PD+VDY+IPGNDD+ R+I LF +A A ++G AR+ M A+ Sbjct: 181 IPVVAVVDSNCDPDMVDYIIPGNDDAIRAIKLFASHMADACLEGAARRKEDKAMEAEETK 240 Query: 240 AGETVVHSKEGMQLEEDSQ 258 A E V ++ + ++++ Sbjct: 241 AAEKAVETEAKEETPQEAK 259 >gi|152978450|ref|YP_001344079.1| 30S ribosomal protein S2 [Actinobacillus succinogenes 130Z] gi|171704232|sp|A6VME7|RS2_ACTSZ RecName: Full=30S ribosomal protein S2 gi|150840173|gb|ABR74144.1| ribosomal protein S2 [Actinobacillus succinogenes 130Z] Length = 241 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 160/241 (66%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R+++ +GV FGH+ WNPKM+ +IF RN HI++L +T+P+ +AL ++ Sbjct: 1 MAQVSMREMINAGVHFGHQTRYWNPKMKPFIFGARNGVHIVNLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ANNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L+ R+ KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKEALDRSREMAKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+PD VD+VIPGNDD++R+I L+ A+A +G + + ++ A Sbjct: 181 IPVFAIVDTNSSPDNVDFVIPGNDDATRAIQLYLTAAAAAVKEGRKAEQAVEEKFSEEAA 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|134296028|ref|YP_001119763.1| 30S ribosomal protein S2 [Burkholderia vietnamiensis G4] gi|166225251|sp|A4JF75|RS2_BURVG RecName: Full=30S ribosomal protein S2 gi|134139185|gb|ABO54928.1| SSU ribosomal protein S2P [Burkholderia vietnamiensis G4] Length = 246 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 162/242 (66%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FV+D K+A+ EA +L +P+ Sbjct: 123 GETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGRANAVNEVVQAVRGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|78066798|ref|YP_369567.1| 30S ribosomal protein S2 [Burkholderia sp. 383] gi|107028801|ref|YP_625896.1| 30S ribosomal protein S2 [Burkholderia cenocepacia AU 1054] gi|116690040|ref|YP_835663.1| 30S ribosomal protein S2 [Burkholderia cenocepacia HI2424] gi|170733375|ref|YP_001765322.1| 30S ribosomal protein S2 [Burkholderia cenocepacia MC0-3] gi|123370089|sp|Q1BHI2|RS2_BURCA RecName: Full=30S ribosomal protein S2 gi|123728962|sp|Q39F43|RS2_BURS3 RecName: Full=30S ribosomal protein S2 gi|166225245|sp|A0K8E3|RS2_BURCH RecName: Full=30S ribosomal protein S2 gi|238688584|sp|B1JUF0|RS2_BURCC RecName: Full=30S ribosomal protein S2 gi|77967543|gb|ABB08923.1| SSU ribosomal protein S2P [Burkholderia sp. 383] gi|105897965|gb|ABF80923.1| SSU ribosomal protein S2P [Burkholderia cenocepacia AU 1054] gi|116648129|gb|ABK08770.1| SSU ribosomal protein S2P [Burkholderia cenocepacia HI2424] gi|169816617|gb|ACA91200.1| ribosomal protein S2 [Burkholderia cenocepacia MC0-3] Length = 246 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVES 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAARGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|121594923|ref|YP_986819.1| 30S ribosomal protein S2 [Acidovorax sp. JS42] gi|166225233|sp|A1W918|RS2_ACISJ RecName: Full=30S ribosomal protein S2 gi|120607003|gb|ABM42743.1| SSU ribosomal protein S2P [Acidovorax sp. JS42] Length = 250 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 102/249 (40%), Positives = 159/249 (63%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA + V E A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 62 NRGTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP+ Sbjct: 122 AGLESMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG-ET 243 + VVD+N +P+ +DYVIPGNDDS++++AL+ +A A ++G A + + + G + Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGRANAVTEVAKAVAAEGSDE 241 Query: 244 VVHSKEGMQ 252 V E Sbjct: 242 FVEVDENAA 250 >gi|116491005|ref|YP_810549.1| SSU ribosomal protein S2P [Oenococcus oeni PSU-1] gi|290890485|ref|ZP_06553560.1| hypothetical protein AWRIB429_0950 [Oenococcus oeni AWRIB429] gi|122276813|sp|Q04F88|RS2_OENOB RecName: Full=30S ribosomal protein S2 gi|116091730|gb|ABJ56884.1| SSU ribosomal protein S2P [Oenococcus oeni PSU-1] gi|290479881|gb|EFD88530.1| hypothetical protein AWRIB429_0950 [Oenococcus oeni AWRIB429] Length = 260 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 108/261 (41%), Positives = 158/261 (60%), Gaps = 5/261 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+G FGH+ W+P+M+ YIF RN HIIDL +T+ M A + Sbjct: 1 MAAISMKELLEAGAHFGHQTRRWDPRMDEYIFTSRNGIHIIDLQKTLRMADDAYNWVKGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A G LFV TK QA++ + E AKR+ VN +WLGG +TNW T+ I KL++L Sbjct: 61 AADGANFLFVGTKKQATEAIEEEAKRAGVAYVNHRWLGGTLTNWNTIKTRINKLKELRAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++ KL++ L GI DM +PD+MFVVD E++A++EAR L Sbjct: 121 EEDGSFDKLPKKEASQLGKQKAKLEKFLGGIADMEDIPDVMFVVDPKTEEIAVKEARSLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN NPDLVD IP NDD+ R++ L +A A I+G RQ G D SA Sbjct: 181 IPVVAMIDTNGNPDLVDVKIPANDDAIRAVKLITSKMADAIIEG--RQGQDAGED--SAE 236 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 +T + +G E+S ++E+ Sbjct: 237 KTFADTADGEGDFEESSNNEN 257 >gi|187778972|ref|ZP_02995445.1| hypothetical protein CLOSPO_02567 [Clostridium sporogenes ATCC 15579] gi|187772597|gb|EDU36399.1| hypothetical protein CLOSPO_02567 [Clostridium sporogenes ATCC 15579] Length = 233 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 150/230 (65%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFLRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + E AKRS + VN++WLGGM+TN+ T++ I KL +L+++ Sbjct: 61 AEEGKDVLFVGTKKQAQEAIEEEAKRSEMHFVNNRWLGGMLTNFTTITARINKLEELDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++ +R+KL++ L GIR + MFVVD +EK AI EA+RL Sbjct: 121 EEDGTFEVLPKKEVIKLKNEREKLEKNLGGIRKLDADNVGAMFVVDPRKEKNAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A ++G + Sbjct: 181 GIPVVAIVDTNCDPDEVDFVIPGNDDAIRAVRLIAAKMADAVLEGRQGEQ 230 >gi|330850613|ref|YP_004376494.1| ribosomal protein S2 [Ptilidium pulcherrimum] gi|302024742|gb|ADK89588.1| ribosomal protein S2 [Ptilidium pulcherrimum] Length = 235 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 92/223 (41%), Positives = 137/223 (61%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH+ WNPKM YIF ER HII+L+QT L +A + S+ + Sbjct: 7 NINLEEMMEAGVHFGHQARKWNPKMAPYIFTERRGIHIINLTQTARFLSEACDLASNAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G + L V TK QA+D V AA ++ + VN KWLGGM+TNW T+ +QK +DLE + L Sbjct: 67 KGKQFLIVGTKYQAADLVASAASKARCHYVNQKWLGGMLTNWSTIQTRLQKFKDLENKKL 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE +++R+ D+L++ L GI+ M LPD++ ++D +E AIQE L IP Sbjct: 127 TGTFNQLPKKEAADLDRQLDQLQKYLGGIKYMTNLPDIVIIIDQQKEFTAIQECLTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+ +PD+ D IP NDD+ SI + + SA +G Sbjct: 187 TICLVDTDCDPDVTDIPIPANDDARASIRWILNKLTSAIREGR 229 >gi|296936660|gb|ADH94332.1| ribosomal protein S2 [Syzygium cumini] Length = 236 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|118586851|ref|ZP_01544285.1| 30S ribosomal protein S2 [Oenococcus oeni ATCC BAA-1163] gi|118432683|gb|EAV39415.1| 30S ribosomal protein S2 [Oenococcus oeni ATCC BAA-1163] Length = 260 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 108/261 (41%), Positives = 158/261 (60%), Gaps = 5/261 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+G FGH+ W+P+M+ YIF RN HIIDL +T+ M A + Sbjct: 1 MAAISMKELLEAGAHFGHQTRRWDPRMDEYIFTSRNGIHIIDLQKTLRMADDAYNWVKGE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 A G LFV TK QA++ + E AKR+ VN +WLGG +TNW T+ I KL++L Sbjct: 61 AADGANFLFVGTKKQATEAIEEEAKRAGVAYVNHRWLGGTLTNWNTIKTRINKLKELRAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + +++ KL++ L GI DM +PD+MFVVD E++A++EAR L Sbjct: 121 EEDGSFDKLPKKEASQLGKQKAKLEKFLGGIADMEDIPDVMFVVDPKTEEIAVKEARTLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA++DTN NPDLVD IP NDD+ R++ L +A A I+G RQ G D SA Sbjct: 181 IPVVAMIDTNGNPDLVDVKIPANDDAIRAVKLITSKMADAIIEG--RQGQDAGED--SAE 236 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 +T + +G E+S ++E+ Sbjct: 237 KTFADTADGEGDFEESSNNEN 257 >gi|325295603|ref|YP_004282117.1| ribosomal protein S2 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066051|gb|ADY74058.1| ribosomal protein S2 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 281 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 106/247 (42%), Positives = 164/247 (66%), Gaps = 1/247 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLE+GV FGH+ WNPKM+++IF ERN HIIDL QT+ ++A ++D VA Sbjct: 35 RVTMKELLEAGVHFGHQKERWNPKMKKFIFTERNGIHIIDLQQTLKYFEQAYDYVADLVA 94 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILF+ TK Q D V E A+R + VN +WLGG +TN++T+ +SI KL+ L+++ Sbjct: 95 NGGTILFLCTKKQGQDIVKEEAQRCGMFYVNKRWLGGTLTNFQTIRKSIFKLKMLKKMEE 154 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE + ++RK++KL++ + GI +M +PD +F+VD RE+ A++EAR+ +P Sbjct: 155 EGVFDRLPKKEAMKLKRKKEKLEKYIGGIENMNRIPDALFIVDIVREENAVKEARKAGVP 214 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 IVA+VDTN++PDLVD IP NDD+ R+I L +A A ++G R+ + A+ + E Sbjct: 215 IVALVDTNADPDLVDLPIPANDDAIRAIRLLTSRIADAVLEGKMRKDAIKLAEGEEVEEV 274 Query: 244 VVHSKEG 250 +E Sbjct: 275 DFIPEEE 281 >gi|293609659|ref|ZP_06691961.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828111|gb|EFF86474.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 267 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++R LL++G FGH+ WNPKM +YIF RN HII+L TVP L AL + Sbjct: 18 MADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFAN 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++ ++LFV TK AS+ + E A+R+ Q V+ +WLGGM+TNWKT+ QSI +L+D Sbjct: 78 QLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQ 137 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + TK+E L R+ +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ Sbjct: 138 TQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKN 197 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ +VDTNSNPD VDYVIPGNDD+ R++ L+ +A A + G S A K Sbjct: 198 LGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKG 257 Query: 240 AG 241 Sbjct: 258 DD 259 >gi|224437209|ref|ZP_03658190.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818] gi|313143674|ref|ZP_07805867.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818] gi|313128705|gb|EFR46322.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818] Length = 262 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 109/261 (41%), Positives = 164/261 (62%), Gaps = 4/261 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+R+IF R N HIIDL +T+ + ++ + + Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVKEVASE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QAS+ + A+ VN +WLGGM+TN+ T+ +S++KL +EE+ + Sbjct: 62 GKVIMFVGTKKQASETLKAYAESVNAPYVNYRWLGGMLTNFSTIKKSVRKLEIIEEMESS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L ++RK++KL + L G+R M PD++FV+D +EK+A+ EARRL IP+ Sbjct: 122 GQIDLLTKKEKLMLQRKKEKLDKYLGGVRHMKKAPDMIFVIDAAKEKIAVAEARRLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VDY IPGNDD+ RSI LFC ++ A ++G A + T Sbjct: 182 VAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEISEAILEGRAENKDLQDEQGEVIPATE 241 Query: 245 VHSKE---GMQLEEDSQSSES 262 +E ++ EE+S E+ Sbjct: 242 SEKQELLDEVKAEENSAQEEA 262 >gi|167563188|ref|ZP_02356104.1| 30S ribosomal protein S2 [Burkholderia oklahomensis EO147] gi|167570371|ref|ZP_02363245.1| 30S ribosomal protein S2 [Burkholderia oklahomensis C6786] Length = 246 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 162/242 (66%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAARGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|313140318|ref|ZP_07802511.1| 30S ribosomal protein S2 [Bifidobacterium bifidum NCIMB 41171] gi|313132828|gb|EFR50445.1| 30S ribosomal protein S2 [Bifidobacterium bifidum NCIMB 41171] Length = 300 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 112/251 (44%), Positives = 165/251 (65%), Gaps = 3/251 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ Q T+ ++L++GV FGH+ WNPKM++YI ERN HII+L +++ ++ KA I Sbjct: 26 AMAQITMSEMLKAGVHFGHQTRRWNPKMKQYILMERNGIHIINLFKSLELIDKAYDFIKA 85 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 86 TVAHNGTVLFVGTKKQAQEAVQTQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEE 145 Query: 122 LL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L +ER++DKL++ L GIR+M P MFVVD N+E LA++EA + Sbjct: 146 MDFSDVHGSGLTKKELLLLEREKDKLEKQLGGIRNMVRTPSAMFVVDINKESLAVEEAHK 205 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-ADTK 238 L IP+VA+VDTN++P+ VDY IP NDD+ R I L L+A A DG+ + A+ + Sbjct: 206 LGIPVVALVDTNTDPESVDYPIPANDDAIRGIELLTSLMADAVADGLLERSGRAAKAEGE 265 Query: 239 SAGETVVHSKE 249 + E + + E Sbjct: 266 TEAEQPMAAWE 276 >gi|302874649|ref|YP_003843282.1| 30S ribosomal protein S2 [Clostridium cellulovorans 743B] gi|307690738|ref|ZP_07633184.1| 30S ribosomal protein S2 [Clostridium cellulovorans 743B] gi|302577506|gb|ADL51518.1| ribosomal protein S2 [Clostridium cellulovorans 743B] Length = 233 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 145/230 (63%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV + +A I Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMATYIFTERNGIYIIDLQKTVKKIDEAYNFIRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + E A RS+ + VNS+WLGGM+TN+ T+ I +L L + Sbjct: 61 AEEGKEVLFVGTKKQAQEAISEEAVRSSMHFVNSRWLGGMLTNFSTIKTRIARLEALNTM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 + + KKE N++ +++KL+R L GI +M +F+VD +EK AI EA++L Sbjct: 121 EQDGTFEVLPKKEVANLKNEQEKLQRNLGGITNMNHENIGALFIVDPRKEKNAISEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 GIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITAKIADAIIEGRQGEQ 230 >gi|45656741|ref|YP_000827.1| 30S ribosomal protein S2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|61215623|sp|Q72U14|RS2_LEPIC RecName: Full=30S ribosomal protein S2 gi|61215774|sp|Q8F140|RS2_LEPIN RecName: Full=30S ribosomal protein S2 gi|45599977|gb|AAS69464.1| 30S ribosomal protein S2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 294 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 106/286 (37%), Positives = 167/286 (58%), Gaps = 10/286 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + Sbjct: 1 MSVISMKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QA + A RS + +N++W GG++TNW TV +SI +L+ LE + Sbjct: 61 TSEGKKVLFVGTKKQARGAIEREAIRSNMFFINNRWPGGLLTNWNTVKRSIARLKKLEGM 120 Query: 123 LNK---ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+ Sbjct: 121 EADNSFEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L + I AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G Sbjct: 181 LGLKIFAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEGTGGVVEQPRFSEDL 240 Query: 240 AGETVVHSKEGMQLE-------EDSQSSESSVLDGQEVAVVPELMS 278 E + +G E ED S ++ + + P + Sbjct: 241 DSEALALEYQGEYDESGKFIMDEDPDSKKTKTAEEPSATIEPSTTT 286 >gi|332532246|ref|ZP_08408127.1| 30S ribosomal protein S2 [Pseudoalteromonas haloplanktis ANT/505] gi|332038344|gb|EGI74789.1| 30S ribosomal protein S2 [Pseudoalteromonas haloplanktis ANT/505] Length = 242 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 115/226 (50%), Positives = 161/226 (71%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L QTVPM AL+ +S Sbjct: 1 MANVSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNDALKFLSSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G++LFV TK ASD V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AANKGKVLFVGTKRAASDAVKAAALESDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 SQDGTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+VA+VDTNSNPD VDY++PGNDD+ R+++L+ VA+A +G Sbjct: 181 IPVVAIVDTNSNPDGVDYIVPGNDDAIRAVSLYTSAVAAAITEGRE 226 >gi|187251058|ref|YP_001875540.1| 30S ribosomal protein S2 [Elusimicrobium minutum Pei191] gi|238058196|sp|B2KC76|RS2_ELUMP RecName: Full=30S ribosomal protein S2 gi|186971218|gb|ACC98203.1| Ribosomal protein S2 [Elusimicrobium minutum Pei191] Length = 324 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 108/274 (39%), Positives = 165/274 (60%), Gaps = 6/274 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ +LE+GV FGH+ WNPKM +YIF ERN HI+DL +T L+KA I + Sbjct: 1 MSNVSMKAMLEAGVHFGHQTSRWNPKMGQYIFGERNGVHILDLQKTAKELKKATAFIKEE 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G R LFV TK QA + + A+R Y ++ KWLGG +TN++TV +S+++L +LE+ Sbjct: 61 AKKGARFLFVGTKKQAQEAIKSEAERCGAYVISEKWLGGTLTNFQTVKKSVERLNELEKW 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +KKE + ++ +L+ L GIR+M LPD++FV+D + A++EA L Sbjct: 121 EREGVFKAISKKEASRLGKEMVRLQTLLGGIREMKSLPDVVFVIDPVDTQGAVKEAVILN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-ADTKSA 240 IP+VAV DTN++PD +DY IPGNDD++RSI LFC VA + I+G A A Sbjct: 181 IPVVAVCDTNADPDNIDYPIPGNDDAARSIKLFCAAVADSIIEGRTEAEGPKQPAQETPA 240 Query: 241 GE----TVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E + + EG EE + +E +V + + Sbjct: 241 AEVENTIMAQALEGALTEEVAVPAEKTVEETVKP 274 >gi|290487134|gb|ADD29951.1| ribosomal protein S2 [Antirrhinum majus] Length = 236 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NIDLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|254785174|ref|YP_003072602.1| 30S ribosomal protein S2 [Teredinibacter turnerae T7901] gi|259495226|sp|C5BQF6|RS2_TERTT RecName: Full=30S ribosomal protein S2 gi|237686481|gb|ACR13745.1| ribosomal protein S2 [Teredinibacter turnerae T7901] Length = 250 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 116/252 (46%), Positives = 162/252 (64%), Gaps = 7/252 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R +L++GV FGH+ WNPKM +YIF RN HII+L TVP AL VI Sbjct: 1 MPTVSMRDMLQAGVHFGHQTRYWNPKMGQYIFGARNKIHIINLEHTVPAFNDALAVIKQM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ ++LFV TK A V E A+R+ V+++WLGGM+TN+KT+ SI+ RDLE Sbjct: 61 ASQKKKVLFVGTKRAAQKTVKEQAERAGMPYVSNRWLGGMLTNYKTIRGSIRSYRDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R DKL+ ++ GI+DMGGLPD MFV+D E++AIQEA +L Sbjct: 121 SQDGTFEKLTKKEALMRTRTMDKLELSIGGIKDMGGLPDAMFVIDVEHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNS+P VDYVIPGNDD+ R+I L+ +A A ++G + G+ +A Sbjct: 181 IPVIGVVDTNSDPAGVDYVIPGNDDAIRAIKLYVTAMADACLEG-----AREGSPAAAAD 235 Query: 242 ETV-VHSKEGMQ 252 E V V S+E + Sbjct: 236 EFVEVESEEKVA 247 >gi|146328956|ref|YP_001209631.1| ribosomal protein S2 [Dichelobacter nodosus VCS1703A] gi|166225268|sp|A5EV13|RS2_DICNV RecName: Full=30S ribosomal protein S2 gi|146232426|gb|ABQ13404.1| ribosomal protein S2 [Dichelobacter nodosus VCS1703A] Length = 267 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 120/260 (46%), Positives = 165/260 (63%), Gaps = 7/260 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R L E+G FGHR WNPKM YI+ +R + HII+L QTVPML AL +S Sbjct: 1 MTQVSMRDLFEAGAHFGHRARFWNPKMAPYIYGKRGDIHIINLEQTVPMLNDALNFLSAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GGR++FV TK ASD + EAA R VN +WLGGMMTN+KT+ QSI++L ++E++ Sbjct: 61 VGNGGRVMFVGTKRSASDAISEAASRCGMPYVNFRWLGGMMTNFKTIRQSIRRLEEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE + +ER+R+KL RAL GIR M LPD++FVVD E++AIQEA +L Sbjct: 121 AEDGTYDKLSKKEVIVLEREREKLARALTGIRSMKHLPDVLFVVDVGHERIAIQEAMKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+V VVDTN++ + VDY+IPGNDDS R+I L+ + A +H+ A + Sbjct: 181 IPVVGVVDTNNDIEGVDYIIPGNDDSVRAIRLYVNAAADTI------EHAKAAAAVRGGD 234 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 E + EE S + E Sbjct: 235 NAEEELAEAISQEEPSAAEE 254 >gi|331269641|ref|YP_004396133.1| 30S ribosomal protein S2 [Clostridium botulinum BKT015925] gi|329126191|gb|AEB76136.1| ribosomal protein S2 [Clostridium botulinum BKT015925] Length = 244 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 100/230 (43%), Positives = 150/230 (65%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + Sbjct: 12 MSIISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSV 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + E + RS + VN++WLGGM+TN+KT+ I KL LE++ Sbjct: 72 VADGKEVLFVGTKKQAQEAIEEESLRSGMHFVNNRWLGGMLTNFKTIRTRINKLEQLEKM 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 + + KKE + + +++KL++ L GI+++ MF+VD +EK AI EA+ L Sbjct: 132 EEDGTFEVLPKKEVIKLRNEKEKLEKNLGGIKNLDASKLGAMFIVDPRKEKNAIAEAKNL 191 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + Sbjct: 192 GIPVVAIVDTNCDPDEIDYVIPGNDDAIRAVRLITSKIAEAIIEGNQGEQ 241 >gi|108802632|ref|YP_636288.1| ribosomal protein S2 [Eucalyptus globulus subsp. globulus] gi|309322440|ref|YP_003933953.1| ribosomal protein S2 [Eucalyptus grandis] gi|122227188|sp|Q49L09|RR2_EUCGG RecName: Full=30S ribosomal protein S2, chloroplastic gi|60460798|gb|AAX21018.1| ribosomal protein S2 [Eucalyptus globulus subsp. globulus] gi|308223274|gb|ADO23582.1| ribosomal protein S2 [Eucalyptus grandis] Length = 236 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|11467370|ref|NP_043227.1| ribosomal protein S2 [Cyanophora paradoxa] gi|1350887|sp|P48132|RR2_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S2 gi|1016171|gb|AAA81258.1| ribosomal protein S2 [Cyanophora paradoxa] Length = 233 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 94/224 (41%), Positives = 145/224 (64%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ ++LE+GV FGH++ WNPKM +YIF ERN HIIDL QT +L +A + + Sbjct: 1 MAIVTLDEMLEAGVHFGHQSRRWNPKMSQYIFTERNGIHIIDLVQTAQLLAEAYDFLRIS 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LF+ TK QA++ + + A R + +N +WLGG +TNW T+ ++ L++LE Sbjct: 61 AEEGKKVLFIGTKRQAANIIAQEATRCGAFYINQRWLGGTLTNWTTIQSRVEYLKELEMR 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + R+ +KL+++L GI+ M +PD++ +VD RE A+QE ++L Sbjct: 121 EESGALDLLPKKEAAILRRQLEKLRKSLGGIQTMRHIPDIVVIVDQKRENNAVQECKKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI+A++DTNS+PD+VD IPGNDD+ RSI L +A A ++G Sbjct: 181 IPIIALLDTNSDPDVVDIPIPGNDDAIRSIKLIIGKLADAILEG 224 >gi|21672506|ref|NP_660573.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009196|sp|Q8K9T0|RS2_BUCAP RecName: Full=30S ribosomal protein S2 gi|21623126|gb|AAM67784.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 244 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 109/222 (49%), Positives = 148/222 (66%), Gaps = 1/222 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL + Sbjct: 1 MEIVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTLPMFNFALSELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS + E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE E Sbjct: 61 SLKKGKILFVGTKRAASKKIKETALNCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETE 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI+EA L Sbjct: 121 SQDGTFSKITKKEALIRTRELSKLENSLGGIKNMGGLPDCLFVIDAAHENIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP+ A+VDTNSNPD VDYVIPGNDD+ RS+ L+ V+ + Sbjct: 181 IPVFAIVDTNSNPDGVDYVIPGNDDAIRSVTLYLQAVSLSIC 222 >gi|188588779|ref|YP_001920603.1| 30S ribosomal protein S2 [Clostridium botulinum E3 str. Alaska E43] gi|251780655|ref|ZP_04823575.1| 30S ribosomal protein S2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|238689700|sp|B2V4F4|RS2_CLOBA RecName: Full=30S ribosomal protein S2 gi|188499060|gb|ACD52196.1| 30S ribosomal protein S2 [Clostridium botulinum E3 str. Alaska E43] gi|243084970|gb|EES50860.1| 30S ribosomal protein S2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 233 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 98/230 (42%), Positives = 149/230 (64%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVRKAEEAYNFIKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA D + + A RS+ + VN++WLGGM+TN+ T+ + I++L ++E + Sbjct: 61 STEGKDILFVGTKKQAQDAIKDEAIRSSMHFVNNRWLGGMLTNFSTIKKRIRRLSEIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMG-GLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++ + +KL++ L GI+++ MFVVD +EK AI EA+ L Sbjct: 121 QEDGTFEVLPKKEVIKLKGELEKLEKNLGGIKNLDCDNIGAMFVVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 GIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIMEGRQGEE 230 >gi|94502481|ref|YP_588107.1| ribosomal protein S2 [Helianthus annuus] gi|122244031|sp|Q1KXW9|RR2_HELAN RecName: Full=30S ribosomal protein S2, chloroplastic gi|88656885|gb|ABD47136.1| ribosomal protein S2 [Helianthus annuus] Length = 236 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A+QE L IP Sbjct: 127 TGGLSRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|209518708|ref|ZP_03267524.1| ribosomal protein S2 [Burkholderia sp. H160] gi|209500822|gb|EEA00862.1| ribosomal protein S2 [Burkholderia sp. H160] Length = 250 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 110/243 (45%), Positives = 162/243 (66%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ + Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLASN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L IP+ Sbjct: 123 GETERMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ VDYVIPGNDD+S+++AL+ VA A ++G A + + A + Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDASKAVALYAAGVADAILEGRANAVNEVVQAARGGDSDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|171318106|ref|ZP_02907275.1| ribosomal protein S2 [Burkholderia ambifaria MEX-5] gi|171096730|gb|EDT41615.1| ribosomal protein S2 [Burkholderia ambifaria MEX-5] Length = 246 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVES 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FV+D K+A+ EA +L +P+ Sbjct: 123 GETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAARGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|222110426|ref|YP_002552690.1| 30S ribosomal protein s2 [Acidovorax ebreus TPSY] gi|254764474|sp|B9MGL7|RS2_DIAST RecName: Full=30S ribosomal protein S2 gi|221729870|gb|ACM32690.1| ribosomal protein S2 [Acidovorax ebreus TPSY] Length = 250 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 103/249 (41%), Positives = 159/249 (63%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA + V E A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 62 NRGTILMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP+ Sbjct: 122 AGLESMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG-ET 243 + VVD+N +P+ +DYVIPGNDDS++++AL+ +A A +DG A + + + G + Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILDGRANAVTEVAKAVAAEGSDE 241 Query: 244 VVHSKEGMQ 252 V E Sbjct: 242 FVEVDENAA 250 >gi|81176240|ref|YP_398319.1| ribosomal protein S2 [Lactuca sativa] gi|75283447|sp|Q56P10|RR2_LACSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|61992024|gb|AAX58145.1| ribosomal protein S2 [Lactuca sativa] gi|78675158|dbj|BAE47584.1| chloroplast 30S ribosomal protein S2 [Lactuca sativa] gi|88656973|gb|ABD47223.1| ribosomal protein S2 [Lactuca sativa] Length = 236 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A+QE L IP Sbjct: 127 TGGLDRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|127513563|ref|YP_001094760.1| 30S ribosomal protein S2 [Shewanella loihica PV-4] gi|166226753|sp|A3QGA3|RS2_SHELP RecName: Full=30S ribosomal protein S2 gi|126638858|gb|ABO24501.1| SSU ribosomal protein S2P [Shewanella loihica PV-4] Length = 242 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 111/240 (46%), Positives = 164/240 (68%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK AS+ + EAA QY V+++WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASKKGKVLFVGTKRAASEAIKEAAISCDQYYVDNRWLGGMLTNWKTVRQSIKRLKDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD++FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTNS+PD ++Y++PGNDD+ R+I L+ + VA+AA G + + Sbjct: 181 IPVVAVVDTNSSPDGINYIVPGNDDAMRAIRLYAESVAAAAKAGRGQDLAVQAEQDGFVE 240 >gi|290487158|gb|ADD29963.1| ribosomal protein S2 [Berberidopsis corallina] Length = 236 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|317406268|gb|EFV86512.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans C54] Length = 249 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 107/246 (43%), Positives = 159/246 (64%), Gaps = 1/246 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM +IF RN HII+L +TV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ Sbjct: 64 NILFVGTKRAARELVAAEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ +KL +++ GI+DM GLPD MFV+D K+AI EA+ L IP+VA Sbjct: 124 AERMIKKEGLLFQRELEKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +P+ +DYVIPGNDDS+++IAL+ +A A ++G + + + + E V Sbjct: 184 VVDTNHSPEGIDYVIPGNDDSAKAIALYAKGIADAVLEGREQNLNGLVEEIGEGQEEFVE 243 Query: 247 SKEGMQ 252 ++ Sbjct: 244 VQDNQA 249 >gi|71064926|ref|YP_263653.1| 30S ribosomal protein S2 [Psychrobacter arcticus 273-4] gi|93005219|ref|YP_579656.1| 30S ribosomal protein S2 [Psychrobacter cryohalolentis K5] gi|122989950|sp|Q1QDT1|RS2_PSYCK RecName: Full=30S ribosomal protein S2 gi|123748153|sp|Q4FUT9|RS2_PSYA2 RecName: Full=30S ribosomal protein S2 gi|71037911|gb|AAZ18219.1| SSU ribosomal protein S2P [Psychrobacter arcticus 273-4] gi|92392897|gb|ABE74172.1| SSU ribosomal protein S2P [Psychrobacter cryohalolentis K5] Length = 264 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 112/271 (41%), Positives = 164/271 (60%), Gaps = 17/271 (6%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +R LL++G FGH+ WNPKM YIF RN HII+L TV +AL ++ A Sbjct: 8 KIEMRDLLQAGAHFGHQTRFWNPKMGPYIFGARNKIHIINLEHTVKAFNEALTYVNGLAA 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-L 123 + ++LFV TK AS + E A R+ V+ +WLGGM+TNWKT+ QSI +L++LE+ Sbjct: 68 KKNKVLFVGTKRAASGVIAEQAARAGMPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAE 127 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TK+E L R +KL+R+L GI+DMGGLPD +FVVD + E +AI+EA+ L IP Sbjct: 128 DGTFAKLTKREALERTRDMEKLERSLGGIKDMGGLPDAIFVVDVDHEAIAIKEAKNLGIP 187 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I AG+ Sbjct: 188 VIGIVDTNSNPDNVDYIIPANDDAIRAVTLYVTSMADAII----------------AGKE 231 Query: 244 VVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 ++ G + E+++ ++E + E A P Sbjct: 232 YAQTQAGGKAEQEAPATEEAADAQTEEAATP 262 >gi|187932860|ref|YP_001885456.1| 30S ribosomal protein S2 [Clostridium botulinum B str. Eklund 17B] gi|238691617|sp|B2TJ40|RS2_CLOBB RecName: Full=30S ribosomal protein S2 gi|187721013|gb|ACD22234.1| 30S ribosomal protein S2 [Clostridium botulinum B str. Eklund 17B] Length = 233 Score = 305 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 98/230 (42%), Positives = 149/230 (64%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV ++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVRKAEEAYNFIKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ILFV TK QA D + + A RS+ + VN++WLGGM+TN+ T+ + I++L ++E + Sbjct: 61 STEGKDILFVGTKKQAQDAIKDEAIRSSMHFVNNRWLGGMLTNFSTIKKRIRRLSEIETM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMG-GLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++ + +KL++ L GI+++ MFVVD +EK AI EA+ L Sbjct: 121 QEDGTFEVLPKKEVIKLKGELEKLEKNLGGIKNLDCDNIGAMFVVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +P+ VDYVIPGNDD+ R++ L +A A ++G + Sbjct: 181 GIPVVAIVDTNCDPEEVDYVIPGNDDAIRAVKLITAKMADAIMEGRQGEE 230 >gi|187924433|ref|YP_001896075.1| 30S ribosomal protein S2 [Burkholderia phytofirmans PsJN] gi|238689611|sp|B2T5J4|RS2_BURPP RecName: Full=30S ribosomal protein S2 gi|187715627|gb|ACD16851.1| ribosomal protein S2 [Burkholderia phytofirmans PsJN] Length = 250 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 112/243 (46%), Positives = 162/243 (66%), Gaps = 2/243 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM AL+ A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + E A+R+ VN++WLGGM+TN+KT+ SI++L+D+E L Sbjct: 63 RGTILFVGTKRQSRDTIAEEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL +++ G++DMGG+PD +FVVD K+A+ EA +L IP+ Sbjct: 123 GETERMSKKEALLFEREMAKLVKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 +AVVDTN +P+ +DYVIPGNDD+S+++AL+ VA A ++G A + + A G+ Sbjct: 183 IAVVDTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGRANAVNEVVQAARGGDGDE 242 Query: 244 VVH 246 V Sbjct: 243 FVE 245 >gi|270291853|ref|ZP_06198068.1| ribosomal protein S2 [Streptococcus sp. M143] gi|270279381|gb|EFA25223.1| ribosomal protein S2 [Streptococcus sp. M143] Length = 259 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 159/250 (63%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVVLFVGTKKQAADAVAEEAVRSGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 181 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAAVEAEFAAS 240 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 241 EAQADSIEEI 250 >gi|313885307|ref|ZP_07819058.1| ribosomal protein S2 [Eremococcus coleocola ACS-139-V-Col8] gi|312619413|gb|EFR30851.1| ribosomal protein S2 [Eremococcus coleocola ACS-139-V-Col8] Length = 256 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 107/256 (41%), Positives = 165/256 (64%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV ++ +A + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDQAYNFMRDN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA + EAA+RS QY +N +WLGG++TNW+T+ QSI++L+ +E++ Sbjct: 61 SADGGVVLFVGTKKQAQQAIQEAAERSGQYYINHRWLGGLLTNWETIQQSIRRLKSIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L + ++ +L++ L GI+DM +PD++FVVD +E++A++EA L Sbjct: 121 EEDGTFDLLPKKEVLQLRKELARLEQNLGGIKDMPRIPDVIFVVDPRKEQIAVKEAHTLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN +PD +D VIP NDD+ R+I L + +A A I+ Q + S Sbjct: 181 IPVVAMVDTNCDPDEIDAVIPSNDDAIRAIKLIANTMAEAVIESNQGQAEESTEEEASDK 240 Query: 242 ETVVHSKEGMQLEEDS 257 E + E + + Sbjct: 241 EFFDNLFEKEETADAE 256 >gi|329947865|ref|ZP_08294797.1| ribosomal protein S2 [Actinomyces sp. oral taxon 170 str. F0386] gi|328523489|gb|EGF50587.1| ribosomal protein S2 [Actinomyces sp. oral taxon 170 str. F0386] Length = 280 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 110/256 (42%), Positives = 158/256 (61%), Gaps = 2/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + Sbjct: 1 MAVVTMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VARGG ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE+ Sbjct: 61 VARGGNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L Sbjct: 121 DFDDVAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ + + A Sbjct: 181 GIPVIAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGLLARSGGRARTGEEA 240 Query: 241 GETVVHSKEGMQLEED 256 ++ + E Sbjct: 241 EVAPADAEPLPEWEAQ 256 >gi|320532039|ref|ZP_08032929.1| ribosomal protein S2 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135752|gb|EFW27810.1| ribosomal protein S2 [Actinomyces sp. oral taxon 171 str. F0337] Length = 282 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 110/256 (42%), Positives = 158/256 (61%), Gaps = 2/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + Sbjct: 1 MAVVTMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VARGG ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE+ Sbjct: 61 VARGGNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L Sbjct: 121 DFDDVAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ + + A Sbjct: 181 GIPVIAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGLLARSGGRARTGEEA 240 Query: 241 GETVVHSKEGMQLEED 256 ++ + E Sbjct: 241 EVAPADAEPLPEWEAQ 256 >gi|148380393|ref|YP_001254934.1| ribosomal protein S2 [Clostridium botulinum A str. ATCC 3502] gi|153933792|ref|YP_001384610.1| 30S ribosomal protein S2 [Clostridium botulinum A str. ATCC 19397] gi|153936674|ref|YP_001388127.1| 30S ribosomal protein S2 [Clostridium botulinum A str. Hall] gi|153940104|ref|YP_001391733.1| 30S ribosomal protein S2 [Clostridium botulinum F str. Langeland] gi|168180684|ref|ZP_02615348.1| ribosomal protein S2 [Clostridium botulinum NCTC 2916] gi|168184642|ref|ZP_02619306.1| 30S ribosomal protein S2 [Clostridium botulinum Bf] gi|170754471|ref|YP_001781978.1| 30S ribosomal protein S2 [Clostridium botulinum B1 str. Okra] gi|170760079|ref|YP_001787747.1| 30S ribosomal protein S2 [Clostridium botulinum A3 str. Loch Maree] gi|226949788|ref|YP_002804879.1| ribosomal protein S2 [Clostridium botulinum A2 str. Kyoto] gi|237795871|ref|YP_002863423.1| 30S ribosomal protein S2 [Clostridium botulinum Ba4 str. 657] gi|166225261|sp|A7FPZ8|RS2_CLOB1 RecName: Full=30S ribosomal protein S2 gi|166225262|sp|A5I4L3|RS2_CLOBH RecName: Full=30S ribosomal protein S2 gi|166225263|sp|A7GG23|RS2_CLOBL RecName: Full=30S ribosomal protein S2 gi|229470511|sp|B1II66|RS2_CLOBK RecName: Full=30S ribosomal protein S2 gi|238688519|sp|B1KWM5|RS2_CLOBM RecName: Full=30S ribosomal protein S2 gi|254764468|sp|C1FSK5|RS2_CLOBJ RecName: Full=30S ribosomal protein S2 gi|259494991|sp|C3L0D3|RS2_CLOB6 RecName: Full=30S ribosomal protein S2 gi|148289877|emb|CAL83985.1| 30S ribosomal protein S2 [Clostridium botulinum A str. ATCC 3502] gi|152929836|gb|ABS35336.1| 30S ribosomal protein S2 [Clostridium botulinum A str. ATCC 19397] gi|152932588|gb|ABS38087.1| 30S ribosomal protein S2 [Clostridium botulinum A str. Hall] gi|152936000|gb|ABS41498.1| 30S ribosomal protein S2 [Clostridium botulinum F str. Langeland] gi|169119683|gb|ACA43519.1| 30S ribosomal protein S2 [Clostridium botulinum B1 str. Okra] gi|169407068|gb|ACA55479.1| 30S ribosomal protein S2 [Clostridium botulinum A3 str. Loch Maree] gi|182668492|gb|EDT80471.1| ribosomal protein S2 [Clostridium botulinum NCTC 2916] gi|182672302|gb|EDT84263.1| 30S ribosomal protein S2 [Clostridium botulinum Bf] gi|226842424|gb|ACO85090.1| ribosomal protein S2 [Clostridium botulinum A2 str. Kyoto] gi|229261723|gb|ACQ52756.1| 30S ribosomal protein S2 [Clostridium botulinum Ba4 str. 657] gi|295319759|gb|ADG00137.1| 30S ribosomal protein S2 [Clostridium botulinum F str. 230613] gi|322806701|emb|CBZ04270.1| SSU ribosomal protein S2p (SAe) [Clostridium botulinum H04402 065] Length = 233 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 100/230 (43%), Positives = 150/230 (65%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFLRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + E AKRS + VN++WLGGM+TN+ T++ I KL +L+++ Sbjct: 61 AEEGKDVLFVGTKKQAQEAIEEEAKRSEMHFVNNRWLGGMLTNFTTITARINKLEELDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDM-GGLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++ +R+KL++ L GIR + MF+VD +EK AI EA+RL Sbjct: 121 EEDGTFEVLPKKEVIKLKNEREKLEKNLGGIRKLDANNVGAMFIVDPRKEKNAILEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VD+VIPGNDD+ R++ L +A A ++G + Sbjct: 181 GIPVVAIVDTNCDPDEVDFVIPGNDDAIRAVRLIAAKMADAVLEGRQGEQ 230 >gi|11465943|ref|NP_054485.1| ribosomal protein S2 [Nicotiana tabacum] gi|28261706|ref|NP_783221.1| ribosomal protein S2 [Atropa belladonna] gi|78102520|ref|YP_358661.1| ribosomal protein S2 [Nicotiana sylvestris] gi|89280624|ref|YP_514841.1| ribosomal protein S2 [Solanum lycopersicum] gi|91208977|ref|YP_538837.1| ribosomal protein S2 [Solanum bulbocastanum] gi|108773119|ref|YP_635628.1| ribosomal protein S2 [Solanum tuberosum] gi|133917|sp|P06355|RR2_TOBAC RecName: Full=30S ribosomal protein S2, chloroplastic gi|75295517|sp|Q7FNT2|RR2_ATRBE RecName: Full=30S ribosomal protein S2, chloroplastic gi|122226194|sp|Q2MIJ8|RR2_SOLBU RecName: Full=30S ribosomal protein S2, chloroplastic gi|122226849|sp|Q3C1H0|RR2_NICSY RecName: Full=30S ribosomal protein S2, chloroplastic gi|122248449|sp|Q2MIB1|RR2_SOLLC RecName: Full=30S ribosomal protein S2, chloroplastic gi|122248896|sp|Q2VEI7|RR2_SOLTU RecName: Full=30S ribosomal protein S2, chloroplastic gi|11814|emb|CAA77345.1| ribosomal protein S2 [Nicotiana tabacum] gi|20068320|emb|CAC88033.1| ribosomal protein S2 [Atropa belladonna] gi|77799547|dbj|BAE46636.1| ribosomal protein S2 [Nicotiana sylvestris] gi|82754618|gb|ABB90032.1| ribosomal protein S2 [Solanum tuberosum] gi|84371884|gb|ABC56202.1| ribosomal protein S2 [Solanum bulbocastanum] gi|84371972|gb|ABC56289.1| ribosomal protein S2 [Solanum lycopersicum] gi|88656793|gb|ABD47046.1| ribosomal protein S2 [Solanum tuberosum] gi|89241660|emb|CAJ32382.1| ribosomal protein S2 [Solanum lycopersicum] gi|225274|prf||1211235J ribosomal protein S2 Length = 236 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + + DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLTDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|302335679|ref|YP_003800886.1| SSU ribosomal protein S2P [Olsenella uli DSM 7084] gi|301319519|gb|ADK68006.1| SSU ribosomal protein S2P [Olsenella uli DSM 7084] Length = 253 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 109/262 (41%), Positives = 167/262 (63%), Gaps = 10/262 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+ + IR LLE+G +GH+ WNPKM YIF ERN +I+DL QTV KA + Sbjct: 1 MAV-KINIRTLLEAGCHYGHQTRRWNPKMRPYIFGERNGIYILDLKQTVVEADKAYSFLK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +T A+GGR+LFV TK QA + + A R+ +N +WLGGM+TN+ T+ I ++ +LE Sbjct: 60 ETAAKGGRVLFVGTKKQAQEPISAQATRAGMPYINQRWLGGMLTNFVTMRSRIDRMEELE 119 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + KKE+ + ++ +KL+R L G+RDM LP +FV+DT RE++A++EA R Sbjct: 120 TMVEDGSMAARGKKEQAVLTKELEKLQRNLGGVRDMHTLPQALFVIDTKREEIAVREANR 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ ++DTNS+PD++DY IP NDD+ RS+ L C+LVA A + G ++ + + Sbjct: 180 LHIPVIGLLDTNSDPDVIDYGIPANDDAIRSVNLMCELVADAVLAGSGKEQ--ISVEEME 237 Query: 240 AGETVVHSKEGMQLEEDSQSSE 261 AGET +E ++ ++E Sbjct: 238 AGETT------PAVETEAPATE 253 >gi|281190716|ref|YP_003330953.1| ribosomal protein S2 [Parthenium argentatum] gi|269924829|gb|ACZ52702.1| ribosomal protein S2 [Parthenium argentatum] Length = 236 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A+QE L IP Sbjct: 127 TGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|329893770|ref|ZP_08269858.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC3088] gi|328923493|gb|EGG30807.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC3088] Length = 249 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 109/235 (46%), Positives = 156/235 (66%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+R+LL++G FGH+ WNPKM RYIF RN HII+L TVP L AL ++ Sbjct: 1 MTQVTMRELLQAGAHFGHQTRYWNPKMGRYIFGARNKIHIINLEHTVPALNDALAMVERL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ++LFV TK A + E A+R+ CV+ +WLGGM+TN+KT+ SI++LRDLE Sbjct: 61 ASNKNKVLFVGTKRAAGKVIKEQAERAGMPCVSHRWLGGMLTNYKTIRASIKRLRDLEAQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+R++ GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 QADGTFAKLTKKEALMRTRQMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IP++ +VDTNS+PD VDYVIPGNDD+ R++ L+ +A A I G + + + Sbjct: 181 IPVIGIVDTNSDPDGVDYVIPGNDDAIRAVKLYAQAIADACIAGKTGDTAAIKNE 235 >gi|206560453|ref|YP_002231217.1| 30S ribosomal protein S2 [Burkholderia cenocepacia J2315] gi|238693110|sp|B4ECN1|RS2_BURCJ RecName: Full=30S ribosomal protein S2 gi|198036494|emb|CAR52391.1| 30S ribosomal protein S2 [Burkholderia cenocepacia J2315] Length = 246 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAARGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|119774276|ref|YP_927016.1| 30S ribosomal protein S2 [Shewanella amazonensis SB2B] gi|119766776|gb|ABL99346.1| SSU ribosomal protein S2P [Shewanella amazonensis SB2B] Length = 258 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 17 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 76 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK AS+ + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 77 ASKKGKILFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELETQ 136 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD +FV+ + E +AI+EA L Sbjct: 137 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEHIAIKEANNLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN++PD V+Y++PGNDD+ R+I L+ + A+AA G + + Sbjct: 197 IPVVAVVDTNASPDGVNYIVPGNDDAMRAIRLYTEAAATAAKAGRGQDLAVQAEQDGFVE 256 >gi|326771760|ref|ZP_08231045.1| ribosomal protein S2 [Actinomyces viscosus C505] gi|326637893|gb|EGE38794.1| ribosomal protein S2 [Actinomyces viscosus C505] Length = 285 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 110/256 (42%), Positives = 158/256 (61%), Gaps = 2/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + Sbjct: 1 MAVVTMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VARGG ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE+ Sbjct: 61 VARGGNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L Sbjct: 121 DFDDVAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ + + A Sbjct: 181 GIPVIAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGLLARSGGRARTGEEA 240 Query: 241 GETVVHSKEGMQLEED 256 ++ + E Sbjct: 241 EVAPADAEPLPEWEAQ 256 >gi|306826162|ref|ZP_07459497.1| 30S ribosomal protein S2 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431638|gb|EFM34619.1| 30S ribosomal protein S2 [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 275 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 159/250 (63%), Gaps = 1/250 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV +A + D Sbjct: 17 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKYADQAYDFMRDA 76 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +LFV TK QA+D V E A RS QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 77 AANDAVVLFVGTKKQAADAVAEEAVRSGQYYINHRWLGGTLTNWGTIQKRIARLKEIKRM 136 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 137 EEEGIFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 196 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + +A Sbjct: 197 IPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKLADAIIEGRQGEDAAAVEAEFAAS 256 Query: 242 ETVVHSKEGM 251 E S E + Sbjct: 257 EAQADSIEEI 266 >gi|296136579|ref|YP_003643821.1| ribosomal protein S2 [Thiomonas intermedia K12] gi|294340707|emb|CAZ89099.1| 30S ribosomal protein S2 [Thiomonas sp. 3As] gi|295796701|gb|ADG31491.1| ribosomal protein S2 [Thiomonas intermedia K12] Length = 252 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 103/251 (41%), Positives = 155/251 (61%), Gaps = 1/251 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++RQ+LE+GV FGH+ WNPKM YI+ RN HI++L +T+PM +A + A Sbjct: 2 SVSMRQMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIVNLEKTLPMYLEAAKFARQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R G ILFV TK QA + V E A+R V+ +WLGGM+TN+KTV SI+KL+D++ Sbjct: 62 RRGTILFVGTKRQAGEIVREQAERCGMPYVDQRWLGGMLTNFKTVKTSIKKLKDMQAQAA 121 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L +R+ DKL++++ GI+DM LPD +FV+D K+AI EA+ L IP Sbjct: 122 EGVLEQMSKKEALTFQREMDKLEKSIGGIQDMAALPDAIFVIDVGYHKIAIAEAKTLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P V ++IPGNDDS++++ L+ +A A ++G + + E Sbjct: 182 VIGVVDTNHSPLGVTHIIPGNDDSAKAVMLYAQGMADAILEGKNDAVNEVVQAVSEGEEE 241 Query: 244 VVHSKEGMQLE 254 V +E Sbjct: 242 FVEVQEDAPAA 252 >gi|221632991|ref|YP_002522214.1| 30S ribosomal protein S2 [Thermomicrobium roseum DSM 5159] gi|221156593|gb|ACM05720.1| ribosomal protein S2 [Thermomicrobium roseum DSM 5159] Length = 290 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 112/261 (42%), Positives = 157/261 (60%), Gaps = 7/261 (2%) Query: 1 MALP-----QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKA 55 M++ Q ++ LLE+GV FGH++ WNPKM YIF ERN HIIDL QTV +L +A Sbjct: 1 MSIAEHETEQVPLKALLEAGVHFGHQSKRWNPKMRPYIFGERNGIHIIDLRQTVRLLAEA 60 Query: 56 LQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQK 115 + ARGG +FV TK QA + + A+R Y V +WLGG +TN+ T+ Q ++ Sbjct: 61 ESFARNLAARGGVFVFVGTKKQAQEIIRSEAERCGMYSVTERWLGGTLTNFVTIRQRLRY 120 Query: 116 L-RDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 L + EE+ + KKE++ R+ KL+R L G+R + LPD ++VVD RE +A+ Sbjct: 121 LVQLEEEVRSPNFAFLPKKEQMRKLRELAKLERTLGGLRGLTRLPDALYVVDPKREAIAV 180 Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 EARRL IPI+A+VDTN +PDL+DYVIP NDD+ RSI L +A A + G + +G Sbjct: 181 AEARRLGIPIIAMVDTNCDPDLIDYVIPANDDAIRSIRLITSRIADAILAGRTMYETEVG 240 Query: 235 ADTKSA-GETVVHSKEGMQLE 254 A + A E + + E E Sbjct: 241 AGEQVALEERELPTYELFDEE 261 >gi|227549017|ref|ZP_03979066.1| 30S ribosomal protein S2 [Corynebacterium lipophiloflavum DSM 44291] gi|227078927|gb|EEI16890.1| 30S ribosomal protein S2 [Corynebacterium lipophiloflavum DSM 44291] Length = 223 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 104/223 (46%), Positives = 154/223 (69%), Gaps = 2/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LL++GV FGH+ WNPKM R+IF +RN +IIDL QT+ + +A + + +T Sbjct: 1 MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQTLTYIDEAFEFVKET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK QA + + E A+R V +WLGGM+TN++TVS+ I ++++L+ + Sbjct: 61 VAHGGTILFVGTKKQAQEPIQEEAQRVGMPYVTHRWLGGMLTNFQTVSKRIARMKELQAM 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E G KKE L + R+R KL+R L GI DM P +++VDTN+E +AI EA++L Sbjct: 121 DAAEEGYAGRGKKEVLMLTRERIKLERVLGGIADMTKAPSALWIVDTNKEHIAISEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 RIP+VAV+DTN +PD+V++ IPGNDD+ R++ L +V A + Sbjct: 181 RIPVVAVLDTNCDPDVVNFPIPGNDDAIRAVKLLTRIVGEAVV 223 >gi|31580934|dbj|BAC77570.1| ribosomal protein S2 [Nicotiana tomentosiformis] Length = 236 Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + + DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TIYLTDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|169350428|ref|ZP_02867366.1| hypothetical protein CLOSPI_01196 [Clostridium spiroforme DSM 1552] gi|169292748|gb|EDS74881.1| hypothetical protein CLOSPI_01196 [Clostridium spiroforme DSM 1552] Length = 304 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 95/228 (41%), Positives = 146/228 (64%), Gaps = 1/228 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + ++++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + +A + +++ Sbjct: 17 TMSVISMKKLLEVGVHFGHQTKRWNPKMAPYIFTARNGIYIIDLQKSSKKIDEAYKAMNE 76 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 A+GG++LFV TK QA + V E A RS + VNS+WLGG +TN+KT+ + I++L +LE+ Sbjct: 77 IAAKGGKVLFVGTKKQAQEAVKEEAIRSESFYVNSRWLGGTLTNFKTIQKRIKRLIELEK 136 Query: 122 LL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++++ KL++ L GI++M LP+ +FVVD E A+ EAR L Sbjct: 137 MEADGTFDLLPKKEVILLKKEAAKLEKNLGGIKEMRRLPNALFVVDPKAEHNAVAEARIL 196 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+ +VDTN +PD VDYVIP NDD+ R++ L +A A + Sbjct: 197 GIPVFGIVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADAICEAKNE 244 >gi|163783684|ref|ZP_02178671.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] gi|159881009|gb|EDP74526.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] Length = 269 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 109/266 (40%), Positives = 170/266 (63%), Gaps = 1/266 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPKM Y++ +N HIIDL++T+ +L++A +SD+VA+G Sbjct: 1 MKELLEAGVHFGHSKSRWNPKMAPYLYGVKNGIHIIDLNRTLVLLEEAYNFVSDSVAQGA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 I+FV TK QA + + E A+R Y VN +W+GG++TN++TV +SIQKL LE + + Sbjct: 61 DIVFVGTKRQAKEIIREEAERCGAYYVNERWVGGLLTNFQTVRRSIQKLNKLERMEAEGV 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + R+ +K+++ GIR+M LPDLM+VVDT RE +AIQEA++L IP+VA Sbjct: 121 FDVLPKKEVRRLRRQMEKMRKLYGGIREMTKLPDLMWVVDTIRESIAIQEAKKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + D+N +PD++DY+IPGNDD+ +SI L +A A +G R+ S + + + V Sbjct: 181 IADSNCDPDVIDYIIPGNDDAIKSIKLLTSKIADAVEEGRNRRESAEEVEARKERKVVTV 240 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAV 272 + +L E + + + + V Sbjct: 241 EEHEKELFEKAMAMSEKYEEIDKDMV 266 >gi|254469522|ref|ZP_05082927.1| ribosomal protein S2 [Pseudovibrio sp. JE062] gi|211961357|gb|EEA96552.1| ribosomal protein S2 [Pseudovibrio sp. JE062] Length = 258 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 143/232 (61%), Positives = 181/232 (78%), Gaps = 1/232 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM YIF RNN HI+DL QTVP+L +AL+ +SDTVA GG Sbjct: 1 MRQLLEAGVHFGHQKHRWNPKMNNYIFGVRNNIHILDLGQTVPLLHQALKAVSDTVAAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+L V TK QA + V EAA+ SAQY VN++WLGGM+TNWKT+SQSIQ+LR +EELL+ + Sbjct: 61 RVLLVGTKRQAQEAVAEAARNSAQYYVNARWLGGMLTNWKTISQSIQRLRKVEELLDGGD 120 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKERL ++R+R KL+R L GI+DMGG+PDL+FV+DTNRE AIQEARRL IP+ A Sbjct: 121 ANRMTKKERLFLDRERQKLERNLGGIKDMGGIPDLIFVIDTNREANAIQEARRLGIPVAA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 ++D+N +PD + Y +PGNDD+ R+I L+ DL+A AAIDGIAR MG D Sbjct: 181 ILDSNCDPDGITYPVPGNDDAGRAITLYTDLIARAAIDGIARASGSMGIDLG 232 >gi|330817439|ref|YP_004361144.1| 30S ribosomal protein S2 [Burkholderia gladioli BSR3] gi|327369832|gb|AEA61188.1| 30S ribosomal protein S2 [Burkholderia gladioli BSR3] Length = 246 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLSAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G ILFV TK Q+ D + + A+R+ VN++WLGGM+TN+KT+ SI++L+D+E + + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVES 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+AI EA +L +P+ Sbjct: 123 GETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAVRGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|94500622|ref|ZP_01307152.1| ribosomal protein S2 [Oceanobacter sp. RED65] gi|94427177|gb|EAT12157.1| ribosomal protein S2 [Oceanobacter sp. RED65] Length = 246 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 114/225 (50%), Positives = 157/225 (69%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R LL++GV FGH+ WNPKM +YIF RN HII+L TVP +AL V+ Sbjct: 1 MAQVSMRDLLKAGVHFGHQTRYWNPKMSQYIFGARNKIHIINLEHTVPAFNEALNVVKGL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ +ILFV TK AS + + A R+ Q V +WLGGM+TN+KT+ QSI++LRDLE Sbjct: 61 AAKNNKILFVGTKRAASKVMQDQASRAGQPFVAHRWLGGMLTNYKTIRQSIKRLRDLEAQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ DKL+R++ GI+DMGGLPD +FV+D + E++AIQEA +L Sbjct: 121 QKDGTFEQLTKKEALMRTREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ +VDTNSNPD VD+VIPGNDD+ R+I +F +A A I+G Sbjct: 181 IPVIGIVDTNSNPDGVDHVIPGNDDAIRAIEIFTTAIADACIEGK 225 >gi|294787815|ref|ZP_06753059.1| ribosomal protein S2 [Simonsiella muelleri ATCC 29453] gi|294484108|gb|EFG31791.1| ribosomal protein S2 [Simonsiella muelleri ATCC 29453] Length = 242 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 115/240 (47%), Positives = 168/240 (70%), Gaps = 1/240 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 Q T+RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A V+ V Sbjct: 3 SQITMRQMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQDVVRRLV 62 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A G +LFV TK QA D + E A+R+ V+ +WLGGM+TN+KTV QSI++L + +L Sbjct: 63 ANKGTVLFVGTKRQARDIIKEEAERAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKSTVL 122 Query: 124 -NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N E G+ KKE L++ R+ +KL+R+L GI+DM GLPD +FV+DT + + EA +L I Sbjct: 123 ANAEASGYNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLGI 182 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++AVVD+N++PDLV +VIPGNDDS+++I L+C +A A ++G + + A ++A E Sbjct: 183 PVIAVVDSNNSPDLVKHVIPGNDDSAKAIRLYCRGIADAVLEGKNQAIAETVAAAQAAAE 242 >gi|296127747|ref|YP_003634999.1| ribosomal protein S2 [Brachyspira murdochii DSM 12563] gi|296019563|gb|ADG72800.1| ribosomal protein S2 [Brachyspira murdochii DSM 12563] Length = 271 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 106/248 (42%), Positives = 165/248 (66%), Gaps = 3/248 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M+LP ++ LLE+GV FGH W+P+M+ +IF ERN+ +IIDL +T+ ++KA + Sbjct: 1 MSLP--VMKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAYDAVK 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + GG +LFV TK QAS + EAA++ Y VN++WLGGM+TN+ T+ +SI +L+ +E Sbjct: 59 EMARNGGNVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIE 118 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E ++ KKE + + +++++L++ GI+DM LPD++FV+D +E +A+ EAR+ Sbjct: 119 KEEVDGTFDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAIAVSEARK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VAVVDTN NP+++D+ IPGNDD+ R+I+LF +VASA I+G A S Sbjct: 179 LGIPVVAVVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEGQNEAGKETLAKHDS 238 Query: 240 AGETVVHS 247 + E Sbjct: 239 SSEVPEEE 246 >gi|324986495|ref|YP_004276365.1| ribosomal protein S2 [Pinus nelsonii] gi|323522683|gb|ADX94931.1| ribosomal protein S2 [Pinus nelsonii] Length = 234 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 90/226 (39%), Positives = 133/226 (58%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK ++L++ + Sbjct: 67 RGKKFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKNLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQFILNRLTSAICEGRALR 232 >gi|262276527|ref|ZP_06054336.1| SSU ribosomal protein S2p (SAe) [Grimontia hollisae CIP 101886] gi|262220335|gb|EEY71651.1| SSU ribosomal protein S2p (SAe) [Grimontia hollisae CIP 101886] Length = 242 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 111/236 (47%), Positives = 159/236 (67%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM L ++ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDVLAELTKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 R G++LFV TK AS+ V AA+ QY VN++WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 GERKGKVLFVGTKRAASEAVKAAAESCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L Sbjct: 121 STDGTFEKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+ AVVDTNS+PD VD+VIPGNDD+ R++ L+ + A A +G ++ D Sbjct: 181 IPVYAVVDTNSDPDGVDFVIPGNDDAIRAVQLYLNAAAQAYSEGRSQDIVAQAEDE 236 >gi|315453640|ref|YP_004073910.1| 30S ribosomal protein S2 [Helicobacter felis ATCC 49179] gi|315132692|emb|CBY83320.1| 30S ribosomal protein S2 [Helicobacter felis ATCC 49179] Length = 262 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 114/261 (43%), Positives = 163/261 (62%), Gaps = 3/261 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +R+IF R N HIIDL +T+ + ++ D + Sbjct: 2 ITMKDLLECGVHFGHQTRRWNPKTKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASSE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QASD + E A + VN +WLGGM+TN+ T+ +S++KL +E++ + Sbjct: 62 GKTIMFVGTKKQASDALKEYAMQVNVPYVNYRWLGGMLTNFSTIRKSVRKLEIMEDMETS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL++ L G+R M +PD+MFVVD +EK+A+ EARRL IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLEKYLGGVRHMKQMPDMMFVVDVVKEKIAVAEARRLGIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA--RQHSYMGADTKSAGE 242 +A +DTN +PDLVDY IPGNDD+ RSI LFC +A A +G + + E Sbjct: 182 IAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMAEAITEGRELVGRSEESQEMMPVSDE 241 Query: 243 TVVHSKEGMQLEEDSQSSESS 263 + E + EE + ES+ Sbjct: 242 ERIEVLEELHQEEQGEVHESN 262 >gi|307822430|ref|ZP_07652662.1| ribosomal protein S2 [Methylobacter tundripaludum SV96] gi|307736996|gb|EFO07841.1| ribosomal protein S2 [Methylobacter tundripaludum SV96] Length = 245 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 105/244 (43%), Positives = 156/244 (63%), Gaps = 2/244 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++RQ+LE+GV FGH+ WNPKM Y+F RN HIIDL +T+PM A+ + Sbjct: 1 MAAVSMRQMLEAGVHFGHQTRYWNPKMATYLFGSRNKIHIIDLEKTLPMFNDAMNYLGQM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +LFV TK A V E A R VN +WLGGM+TN+KT+ +SI +L++LE + Sbjct: 61 TANKGTVLFVGTKKAARKVVAEEAARCGMPYVNHRWLGGMLTNFKTIKKSINRLKELEAM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 Q F KKE L +ER+ +KL+R+L GI+DM G+PD++F++D EK AI EA++L Sbjct: 121 KADGTLYQRFAKKEALGMERELEKLERSLGGIKDMKGVPDVIFILDVGYEKNAISEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+V +VD+N++P+ +DY+IPGNDDS R++ L+C+ V++A ++ + Sbjct: 181 GIPVVGIVDSNNSPEKIDYIIPGNDDSIRAVKLYCESVSAAVMEAKSAGLGLSAKADDFV 240 Query: 241 GETV 244 E Sbjct: 241 EEAA 244 >gi|209573691|sp|A1S4P0|RS2_SHEAM RecName: Full=30S ribosomal protein S2 Length = 242 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 161/240 (67%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L TVPM +AL IS+ Sbjct: 1 MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK AS+ + EAA QY V+ +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 ASKKGKILFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE L R+ +KL+++L GI++MGGLPD +FV+ + E +AI+EA L Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN++PD V+Y++PGNDD+ R+I L+ + A+AA G + + Sbjct: 181 IPVVAVVDTNASPDGVNYIVPGNDDAMRAIRLYTEAAATAAKAGRGQDLAVQAEQDGFVE 240 >gi|328948076|ref|YP_004365413.1| ribosomal protein S2 [Treponema succinifaciens DSM 2489] gi|328448400|gb|AEB14116.1| ribosomal protein S2 [Treponema succinifaciens DSM 2489] Length = 288 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 100/279 (35%), Positives = 168/279 (60%), Gaps = 13/279 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ ++ + V+ Sbjct: 1 MAVVTMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTITAIKDSYDVVRKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +LFV TK QA + + A+R Y VN++WLGG +TN+ T+ +S+ +L+ +E++ Sbjct: 61 ASSGKSVLFVGTKKQAQQAIAKEAERCGMYYVNNRWLGGTLTNFTTIKKSLLRLKKIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKE ++++ L + G++DM LP +F++DT++E++A+ EARR+ Sbjct: 121 EVDGTFDKLTKKEVAAYMKEKETLTKNYGGMKDMKELPGAVFIIDTHKEQIAVAEARRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM-------- 233 IPI+A+VDTN NP+ ++Y IPGNDD+ R+I+LF ++A+A I+ Q + Sbjct: 181 IPIIAIVDTNCNPEGINYPIPGNDDAIRAISLFTSIIANAVIEADNEQGLKIIDTLGDED 240 Query: 234 ----GADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 A TK E +V E + +E+ + + Sbjct: 241 DVTTDATTKKEDEEIVDYSNYTPTEPKEEDAEADKRESE 279 >gi|254513843|ref|ZP_05125904.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] gi|219676086|gb|EED32451.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] Length = 264 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 108/234 (46%), Positives = 153/234 (65%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R LL++G FGH+ WNPKM +YIF +RN HII+L TVP +AL ++ Sbjct: 1 MSQVSMRDLLQAGAHFGHQTRYWNPKMGQYIFGDRNKIHIINLEYTVPAFNEALDMVKRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +I+FV TK A + E A+R+ V+ +WLGGM+TN+KT+ SI++LR+LE Sbjct: 61 AASKNKIMFVGTKRAAGKIMKEQAERAGMPYVSHRWLGGMLTNYKTIRASIKRLRELEAQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+R++ GI+DMGGLPD +FV+D + E++AI EA +L Sbjct: 121 QSDGTFAALTKKEALMRARQMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 IP++ VVDTNS+PD VDYVIPGNDD+ R+I L+ VA A I G + Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDAIRAIKLYVTAVADACIAGKVEAGGAVPV 234 >gi|32266571|ref|NP_860603.1| 30S ribosomal protein S2 [Helicobacter hepaticus ATCC 51449] gi|61215711|sp|Q7VH95|RS2_HELHP RecName: Full=30S ribosomal protein S2 gi|32262622|gb|AAP77669.1| ribosomal protein S2 [Helicobacter hepaticus ATCC 51449] Length = 264 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 105/264 (39%), Positives = 166/264 (62%), Gaps = 3/264 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+R+IF R N HIIDL +T+ + +I + Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIIKQAASE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI++L +EE+ + Sbjct: 62 GKVIMFVGTKRQASETLKQYAESVNAPYVNYRWLGGMLTNFSTIKKSIRRLEIIEEMESS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L ++RK++KL + L G+R M PD++FV+D +EK+A+ EARRL IP+ Sbjct: 122 GQIDLLTKKEKLMLQRKKEKLDKYLGGVRHMKKAPDMIFVIDAAKEKIAVAEARRLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VDY IPGNDD+ RSI LFC ++ A ++G + + Sbjct: 182 VAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEISEAILEGRSENKDEQNEQGEQIA--P 239 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 V ++E ++ ++ + ++ + + Sbjct: 240 VTNEEKQEILDEVTAEVATQMQEE 263 >gi|293605056|ref|ZP_06687449.1| 30S ribosomal protein S2 [Achromobacter piechaudii ATCC 43553] gi|292816558|gb|EFF75646.1| 30S ribosomal protein S2 [Achromobacter piechaudii ATCC 43553] Length = 249 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 110/246 (44%), Positives = 159/246 (64%), Gaps = 1/246 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM YIF RN HII+L +TV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK A + V A R V+++WLGGM+TN+KTV S+++L+D+E ++ Sbjct: 64 NILFVGTKRAARELVASEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEVVVAEGG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L +R+ DKL +++ GI+DM GLPD MFV+D K+AI EA+ L IP+VA Sbjct: 124 AERMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +PD +DYVIPGNDDS+++IAL+ +A A ++G + + + + E V Sbjct: 184 VVDTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGREQNLNGLVEEQGEGQEEFVE 243 Query: 247 SKEGMQ 252 ++ Sbjct: 244 VQDNQA 249 >gi|84786663|gb|ABC62845.1| ribosomal protein S2 [Erythrobacter litoralis HTCC2594] Length = 238 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 119/244 (48%), Positives = 168/244 (68%), Gaps = 6/244 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QL+E+G FGH+ WNP+M+ YIF RN HIIDLSQTVP++ +AL + T GG Sbjct: 1 MQQLIEAGSHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVHATANAGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA + + EAA+ S Q+ VN +WLGGM+TNW+T+S+SI++L+ LEE L+ E Sbjct: 61 KVLFVGTKRQAQEPIAEAARSSGQHFVNHRWLGGMLTNWQTISKSIKELKSLEEQLSGET 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 G TKKE LN+ RKRDKL+ +L GIRDMGG+PD+M V+D N+E LAI+EA L IP+V + Sbjct: 121 HGLTKKEVLNLTRKRDKLELSLGGIRDMGGVPDVMVVIDANKEDLAIKEANVLGIPVVGI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 +DTN +P + + +PGNDD++R++ L+CD A AA + GA+ V + Sbjct: 181 LDTNVDPSGIAFPVPGNDDAARAVRLYCDAFAQAA------SKNGGGANVGEMENPPVEA 234 Query: 248 KEGM 251 Sbjct: 235 TADA 238 >gi|13518439|ref|NP_084799.1| ribosomal protein S2 [Lotus japonicus] gi|25009142|sp|Q9BBS6|RR2_LOTJA RecName: Full=30S ribosomal protein S2, chloroplastic gi|13358980|dbj|BAB33197.1| ribosomal protein S2 [Lotus japonicus] Length = 236 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 87/222 (39%), Positives = 128/222 (57%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NITFEEMMEAGVHFGHGTRKWNPKMAPYISMKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG R L V TK +A+D V AA R+ + VN KWLGGM+TNW T ++K R+ E Sbjct: 67 RGKRFLIVGTKKKAADLVARAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRELRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGKLNCLPKRDAAILKRQLSHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|325126854|ref|YP_004286091.1| ribosomal protein S2 [Fragaria vesca subsp. vesca] gi|324022766|gb|ADY15340.1| ribosomal protein S2 [Fragaria vesca subsp. vesca] Length = 236 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKRDAAVLKRQLFHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|152991910|ref|YP_001357631.1| 30S ribosomal protein S2 [Sulfurovum sp. NBC37-1] gi|166226762|sp|A6Q715|RS2_SULNB RecName: Full=30S ribosomal protein S2 gi|151423771|dbj|BAF71274.1| 30S ribosomal protein S2 [Sulfurovum sp. NBC37-1] Length = 344 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 110/247 (44%), Positives = 158/247 (63%), Gaps = 4/247 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+++IF R N +IIDL +T+ + V+ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKFIFGARKNIYIIDLQKTLRYFKYTYNVVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +LFV TK QA V E A+R+ V ++WLGGM+TN+ T+ +SI+KL +E++ N Sbjct: 62 GQTVLFVGTKKQARQAVKEHAERAGMPYVATRWLGGMLTNYPTMKKSIRKLEIIEQMEEN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL L+G R M LPD+MFV+D +E +A++EARRL + + Sbjct: 122 GQLDMLTKKEALMLLRKKEKLSSYLEGFRYMKKLPDMMFVIDAVKENIAVKEARRLGMKV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A +DTN +PD++DY IPGNDD+ RSI LFC +A A I+G A +Y A+ A E Sbjct: 182 IAPLDTNCDPDVIDYPIPGNDDAIRSINLFCKEMADAIIEGKA---AYAEANGGEAEEVP 238 Query: 245 VHSKEGM 251 E + Sbjct: 239 AGEMEAV 245 >gi|237739389|ref|ZP_04569870.1| SSU ribosomal protein S2P [Fusobacterium sp. 2_1_31] gi|229422997|gb|EEO38044.1| SSU ribosomal protein S2P [Fusobacterium sp. 2_1_31] Length = 247 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 97/247 (39%), Positives = 159/247 (64%), Gaps = 3/247 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN H+IDL +++ +++A + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQAKRWNPKMKKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+RS Y +N++WLGGM+TN+ T+ + I+++++LE + Sbjct: 61 AEDGGKVLFVGTKKQAQEAIKEQAERSGMYYINNRWLGGMLTNFSTIKKRIERMKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 121 DADGTLDSDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVREAHLL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G +H ++ + Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEGNQGHEHVEPQSEEVN 240 Query: 240 AGETVVH 246 E V Sbjct: 241 VEEGSVE 247 >gi|157825245|ref|YP_001492965.1| 30S ribosomal protein S2 [Rickettsia akari str. Hartford] gi|166226746|sp|A8GM32|RS2_RICAH RecName: Full=30S ribosomal protein S2 gi|157799203|gb|ABV74457.1| 30S ribosomal protein S2 [Rickettsia akari str. Hartford] Length = 295 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 129/271 (47%), Positives = 182/271 (67%), Gaps = 5/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I +T Sbjct: 4 ISSVNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYET 63 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + G++LFV+TK QASD + E A++ QY VN +WLGGM+TNWKT++ SI+KL LE+ Sbjct: 64 VKKDGKVLFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKT 123 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L G+TKKE L++ RK++KL +L GIR++ PDL+ V+DTN+E +AI EA +L Sbjct: 124 LENAEALIGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D + Sbjct: 184 NVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCRLFADAALQGLEESMKASGVDMGAM 243 Query: 241 GETVVH---SKEGMQLEEDSQSSESSVLDGQ 268 E + SK +L++ + S++ +D + Sbjct: 244 HEHTDNALISKNVSKLKQAKKFSKTKNIDEE 274 >gi|225630157|ref|YP_002726948.1| ribosomal protein S2 [Wolbachia sp. wRi] gi|254764500|sp|C0R2L5|RS2_WOLWR RecName: Full=30S ribosomal protein S2 gi|225592138|gb|ACN95157.1| ribosomal protein S2 [Wolbachia sp. wRi] Length = 282 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 127/271 (46%), Positives = 179/271 (66%), Gaps = 3/271 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVIS 60 LP+ T+R L ESGV FGH+ WN K+ YI+ N HIIDL +T+P+LQ A++V+ Sbjct: 4 LPKVTVRDLAESGVHFGHKISRWNAKIAPYIYGVHQENRIHIIDLRKTLPLLQVAMKVLY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVAFQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPIVA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI + G Sbjct: 184 GIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGIESSLAKSGVKIDDI 243 Query: 241 -GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 G+ + KE ++ + S+ + +EV Sbjct: 244 RGDEFIQEKEDGIVQTKRRRSKVYKEEEREV 274 >gi|71275210|ref|ZP_00651497.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Dixon] gi|71901971|ref|ZP_00684021.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|170731204|ref|YP_001776637.1| 30S ribosomal protein S2 [Xylella fastidiosa M12] gi|238687956|sp|B0U5I9|RS2_XYLFM RecName: Full=30S ribosomal protein S2 gi|71164019|gb|EAO13734.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Dixon] gi|71728257|gb|EAO30438.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|167965997|gb|ACA13007.1| 30S ribosomal protein S2 [Xylella fastidiosa M12] Length = 266 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 103/266 (38%), Positives = 153/266 (57%), Gaps = 1/266 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ +PKM IF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +LFV TK A D + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGSVLFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELELA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K E L + R+ KL+ +L GI+DM +PD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFSKLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + + Sbjct: 181 IPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGKAAMPNAVAVREEEFA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG 267 K+G Q + S Sbjct: 241 SAPDAGKKGRQAQPKKGKRASDAAAE 266 >gi|323341767|ref|ZP_08082000.1| 30S ribosomal protein S2 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464192|gb|EFY09385.1| 30S ribosomal protein S2 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 307 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 162/258 (62%), Gaps = 4/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLESGV +GH+ WNPKM+ YI+ +N +IIDL++T L +A + D Sbjct: 1 MSVVTMKKLLESGVHYGHQTRRWNPKMKPYIYAAKNRIYIIDLNKTQEKLDEAYAAMKDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++L V TK QA V+E A RS + +N +WLGG +TN++T+ +SI++L ++EE+ Sbjct: 61 AEKGGKLLIVGTKKQAQTIVLEEALRSGSFFINQRWLGGTLTNFRTIQKSIRRLVEIEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + +TKKE + +++D+L+ L GI++M LPD +FVVD + A+ EAR+L Sbjct: 121 ENSGSINVYTKKEVSLLLKEKDRLENFLGGIKEMKKLPDALFVVDPIEDANAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTKS 239 IP+ +VDTN +PD VDY IPGNDD+ R+I L+A A I+ G Q +Y D + Sbjct: 181 IPVFGIVDTNCDPDAVDYAIPGNDDAIRAIRTIVGLMADAMIEPKGGVLQVAYQDQDVED 240 Query: 240 AG-ETVVHSKEGMQLEED 256 E V+ + E E D Sbjct: 241 ITMEDVIVNVEQQAAEND 258 >gi|15603964|ref|NP_220479.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Madrid E] gi|6226099|sp|Q9ZE61|RS2_RICPR RecName: Full=30S ribosomal protein S2 gi|3860655|emb|CAA14556.1| 30S RIBOSOMAL PROTEIN S2 (rpsB) [Rickettsia prowazekii] gi|292571678|gb|ADE29593.1| 30S ribosomal protein S2 [Rickettsia prowazekii Rp22] Length = 296 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 125/245 (51%), Positives = 171/245 (69%), Gaps = 5/245 (2%) Query: 3 LPQFT---IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 + + + I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I Sbjct: 1 MSKISPINIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 +TV + G+ILFV+TK QASD + E A++ QY VN++WLGGM+TNWKT++ SI+KL L Sbjct: 61 YETVKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKL 120 Query: 120 EELLNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E+ L E +TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA Sbjct: 121 EKTLESEEARICYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEA 180 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 +L IP+VAVVDTNSNPD VDY IPGNDDS RSI L+C L A AA+ G+ G D Sbjct: 181 VKLNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKVSGVDI 240 Query: 238 KSAGE 242 + + Sbjct: 241 GTMQD 245 >gi|224283169|ref|ZP_03646491.1| 30S ribosomal protein S2 [Bifidobacterium bifidum NCIMB 41171] gi|310287534|ref|YP_003938792.1| SSU ribosomal protein S2P [Bifidobacterium bifidum S17] gi|311064447|ref|YP_003971172.1| 30S ribosomal protein S2P RpsB [Bifidobacterium bifidum PRL2010] gi|309251470|gb|ADO53218.1| SSU ribosomal protein S2P [Bifidobacterium bifidum S17] gi|310866766|gb|ADP36135.1| RpsB SSU ribosomal protein S2P [Bifidobacterium bifidum PRL2010] Length = 274 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 111/250 (44%), Positives = 164/250 (65%), Gaps = 3/250 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++GV FGH+ WNPKM++YI ERN HII+L +++ ++ KA I T Sbjct: 1 MAQITMSEMLKAGVHFGHQTRRWNPKMKQYILMERNGIHIINLFKSLELIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVQTQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL++ L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVHGSGLTKKELLLLEREKDKLEKQLGGIRNMVRTPSAMFVVDINKESLAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-ADTKS 239 IP+VA+VDTN++P+ VDY IP NDD+ R I L L+A A DG+ + A+ ++ Sbjct: 181 GIPVVALVDTNTDPESVDYPIPANDDAIRGIELLTSLMADAVADGLLERSGRAAKAEGET 240 Query: 240 AGETVVHSKE 249 E + + E Sbjct: 241 EAEQPMAAWE 250 >gi|237750359|ref|ZP_04580839.1| ribosomal protein S2 [Helicobacter bilis ATCC 43879] gi|229373889|gb|EEO24280.1| ribosomal protein S2 [Helicobacter bilis ATCC 43879] Length = 268 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 110/267 (41%), Positives = 164/267 (61%), Gaps = 11/267 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+++IF R N HIIDL +T+ + ++ D + Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAASE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QASD + E A++ VN +WLGGM+TN+ T+ +S++KL +EE+ + Sbjct: 62 GKVIMFVGTKKQASDTLREYAEKVNAPYVNYRWLGGMLTNFSTIKKSVRKLEIIEEMESS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L + RK++KL + L GIR + PD++FVVD +EK+A+ EAR+L IP+ Sbjct: 122 GQIDLLTKKEKLMLMRKKEKLNKYLGGIRHLKKAPDMLFVVDALKEKIAVGEARKLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI----------ARQHSYMG 234 VA +DTN +PDL+DY IPGNDD+ RSI LFC ++ A +G A + + Sbjct: 182 VAPLDTNCDPDLIDYPIPGNDDAIRSIQLFCKEISDAITEGREMNGIEGEENAERTEPLP 241 Query: 235 ADTKSAGETVVHSKEGMQLEEDSQSSE 261 A E + + M+ E ++ E Sbjct: 242 ATEAEKDEVMAELQAEMEKEFQAKEGE 268 >gi|300854488|ref|YP_003779472.1| 30S ribosomal protein S2 [Clostridium ljungdahlii DSM 13528] gi|300434603|gb|ADK14370.1| 30S ribosomal protein S2 [Clostridium ljungdahlii DSM 13528] Length = 235 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 96/230 (41%), Positives = 144/230 (62%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFIREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI-QKLRDLEE 121 + G ILF+ TK QA + + E AKRS + VN++WLGGM+TN+ T+ I + + Sbjct: 61 ASEGKDILFIGTKKQAQEAIKEEAKRSNMHYVNNRWLGGMLTNFATIKTRIAKLEELEKM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMG-GLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + + +++KL++ L GI+ M +F+VD +EK AI EA+ L Sbjct: 121 EEDGTFEVLPKKEVIKLNNEKEKLEKNLGGIKTMNAENVGALFIVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L VA A ++G + Sbjct: 181 GIPVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLITSKVADAVMEGRQGEQ 230 >gi|332284279|ref|YP_004416190.1| 30S ribosomal protein S2 [Pusillimonas sp. T7-7] gi|330428232|gb|AEC19566.1| 30S ribosomal protein S2 [Pusillimonas sp. T7-7] Length = 249 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 106/222 (47%), Positives = 151/222 (68%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ WNPKM +IF RN HI++L QTV Q+A + + ARGG Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIVNLEQTVVKYQEAAKFVRQLAARGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK A + V A R V+S+WLGGMMTN+KTV S+++L+++E L Sbjct: 64 NVLFVGTKRAARELVAAEAARCGMPYVDSRWLGGMMTNFKTVKTSVKRLKEMEAQLAEGA 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE L +R+ +KL +A+ GI+DM LPD +FV+D K+A+ EAR L IP+VA Sbjct: 124 TERMSKKEALMFDRELEKLNKAIGGIKDMNTLPDALFVIDVGYHKIAVAEARTLGIPVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 VVDTN +PD VDY+IPGNDDS+++IAL+ +A A ++G + Sbjct: 184 VVDTNHSPDGVDYIIPGNDDSAKAIALYARGMADAVLEGREQ 225 >gi|15839169|ref|NP_299857.1| 30S ribosomal protein S2 [Xylella fastidiosa 9a5c] gi|28199827|ref|NP_780141.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1] gi|71898290|ref|ZP_00680464.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|182682578|ref|YP_001830738.1| 30S ribosomal protein S2 [Xylella fastidiosa M23] gi|54039457|sp|P66547|RS2_XYLFT RecName: Full=30S ribosomal protein S2 gi|54041957|sp|P66546|RS2_XYLFA RecName: Full=30S ribosomal protein S2 gi|238691116|sp|B2I9U3|RS2_XYLF2 RecName: Full=30S ribosomal protein S2 gi|9107797|gb|AAF85377.1|AE004065_2 30S ribosomal protein S2 [Xylella fastidiosa 9a5c] gi|28057948|gb|AAO29790.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1] gi|71732029|gb|EAO34086.1| Ribosomal protein S2, bacterial and organelle form [Xylella fastidiosa Ann-1] gi|182632688|gb|ACB93464.1| ribosomal protein S2 [Xylella fastidiosa M23] gi|307578859|gb|ADN62828.1| 30S ribosomal protein S2 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 266 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 103/266 (38%), Positives = 152/266 (57%), Gaps = 1/266 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ +PKM IF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +LFV TK A D + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGSVLFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELELA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K E L + R+ KL+ +L GI+DM +PD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFSKLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VAVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + Sbjct: 181 IPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGKAAMPNAAAVREEEFA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG 267 K+G Q + S Sbjct: 241 SAPDAGKKGRQAQPKKGKRASDAAAE 266 >gi|33865624|ref|NP_897183.1| 30S ribosomal protein S2 [Synechococcus sp. WH 8102] gi|61215691|sp|Q7U795|RS2_SYNPX RecName: Full=30S ribosomal protein S2 gi|33632794|emb|CAE07605.1| 30S ribosomal protein S2 [Synechococcus sp. WH 8102] Length = 239 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 95/233 (40%), Positives = 137/233 (58%), Gaps = 1/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWTRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVALEAARCGAAYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKTMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + G Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRLADAINEGRHGNNEQRG 233 >gi|91208891|ref|YP_538924.1| ribosomal protein S2 [Gossypium hirsutum] gi|119368488|ref|YP_913176.1| ribosomal protein S2 [Gossypium barbadense] gi|325210919|ref|YP_004285993.1| ribosomal protein S2 [Gossypium thurberi] gi|122232503|sp|Q2L8Z6|RR2_GOSHI RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573603|sp|A0ZZ24|RR2_GOSBA RecName: Full=30S ribosomal protein S2, chloroplastic gi|85687405|gb|ABC73617.1| ribosomal protein S2 [Gossypium hirsutum] gi|119224850|dbj|BAF41236.1| Ribosomal protein S2 [Gossypium barbadense] gi|290775781|gb|ADD62277.1| ribosomal protein S2 [Gossypium thurberi] Length = 236 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 KGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWPTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M LPD++ +VD E A++E L IP Sbjct: 127 TGGLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTRLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTNS+PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRLILNKLVVAICEGRS 230 >gi|153875861|ref|ZP_02003471.1| Ribosomal protein S2 [Beggiatoa sp. PS] gi|152067675|gb|EDN66529.1| Ribosomal protein S2 [Beggiatoa sp. PS] Length = 260 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 151/230 (65%), Gaps = 1/230 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM YIF ERN HII+L ++PM A + AR G Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMGPYIFGERNKIHIINLEHSLPMYNDAGNFLGKLAARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK A D V EAA R VN +WLGGM+TN+KTV SI++L+DLE L + Sbjct: 61 AILFVGTKRAAQDPVKEAALRCGMPYVNRRWLGGMLTNYKTVKASIKRLKDLEILTQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L++ R+ KL+R+L GI+DM LPD +F++D EK+A+QEA +L IP+V Sbjct: 121 LHRITKKEALSLTRELAKLERSLGGIKDMNVLPDALFIIDVGYEKIAVQEAVKLGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 VVDTN+NP+ VDY+IPGNDD+ R+I L+ + +A I+ A+ Sbjct: 181 VVDTNNNPENVDYIIPGNDDAIRAITLYVNGMADTIIESRQASLQIAMAE 230 >gi|74316803|ref|YP_314543.1| 30S ribosomal protein S2P [Thiobacillus denitrificans ATCC 25259] gi|123773040|sp|Q3SKN9|RS2_THIDA RecName: Full=30S ribosomal protein S2 gi|74056298|gb|AAZ96738.1| Ribosomal protein S2 [Thiobacillus denitrificans ATCC 25259] Length = 248 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 110/224 (49%), Positives = 159/224 (70%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNP+M +IF RN HI++L +++PM Q+A + + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRFWNPRMAPFIFGHRNKIHIVNLEKSLPMFQEAQKFVRQLSA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +LFV TK A D V E A+R+ V+ +WLGGM+TN+KTV QSI++L DLE + Sbjct: 62 NKGNVLFVGTKRAARDIVREEAQRAGMPYVDQRWLGGMLTNFKTVKQSIKRLNDLEAQI- 120 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E +KKE L ++R+ DKL R+L GIR+MGGLPD +F++D +K A+ EA++L IP+ Sbjct: 121 AEPGRLSKKEILTVQREVDKLNRSLGGIREMGGLPDALFIIDVGYQKGAVVEAKKLGIPV 180 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 + VVDTN++P+ VDYVIPGNDDS+R+I L+ +A AA++G A+ Sbjct: 181 IGVVDTNNSPEGVDYVIPGNDDSARAIRLYARGMADAALEGRAQ 224 >gi|115352103|ref|YP_773942.1| 30S ribosomal protein S2 [Burkholderia ambifaria AMMD] gi|170699873|ref|ZP_02890903.1| ribosomal protein S2 [Burkholderia ambifaria IOP40-10] gi|172060967|ref|YP_001808619.1| 30S ribosomal protein S2 [Burkholderia ambifaria MC40-6] gi|122322840|sp|Q0BE15|RS2_BURCM RecName: Full=30S ribosomal protein S2 gi|238689164|sp|B1YS74|RS2_BURA4 RecName: Full=30S ribosomal protein S2 gi|115282091|gb|ABI87608.1| SSU ribosomal protein S2P [Burkholderia ambifaria AMMD] gi|170135195|gb|EDT03493.1| ribosomal protein S2 [Burkholderia ambifaria IOP40-10] gi|171993484|gb|ACB64403.1| ribosomal protein S2 [Burkholderia ambifaria MC40-6] Length = 246 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 110/242 (45%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM +IF RN HII+L +T+PM A + + A Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ILFV TK Q+ D + + A+R+ VN++WLGGMMTN+KT+ SI++L+D+E + Sbjct: 63 RGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEA 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + +KKE L ER+ KL++++ G++DMGG+PD +FVVD K+A+ EA +L +P+ Sbjct: 123 GELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +AVVDTN +P+ VDYVIPGNDDSS+++AL+ + VA A ++G A + + + E V Sbjct: 183 IAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRANAVNEVVQAARGDDEYV 242 Query: 245 VH 246 Sbjct: 243 EE 244 >gi|290487170|gb|ADD29969.1| ribosomal protein S2 [Heuchera sanguinea] Length = 236 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M G+PD++ +VD E A++E L IP Sbjct: 127 TGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGVPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|81301551|ref|YP_398848.1| ribosomal protein S2 [Nicotiana tomentosiformis] gi|122245644|sp|Q33C49|RR2_NICTO RecName: Full=30S ribosomal protein S2, chloroplastic gi|80750910|dbj|BAE47986.1| ribosomal protein S2 [Nicotiana tomentosiformis] Length = 236 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + + DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TIYLTDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|21230832|ref|NP_636749.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|25009200|sp|Q8PAV2|RS2_XANCP RecName: Full=30S ribosomal protein S2 gi|21112436|gb|AAM40673.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 275 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 101/248 (40%), Positives = 154/248 (62%), Gaps = 2/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ WNPK+ YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQTRYWNPKLAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA-DTKSA 240 IP++AVVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + + + Sbjct: 181 IPVIAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFS 240 Query: 241 GETVVHSK 248 E K Sbjct: 241 AEAGDEGK 248 >gi|313199692|ref|YP_004021306.1| ribosomal protein S2 [Theobroma cacao] gi|309321256|gb|ADO64799.1| ribosomal protein S2 [Theobroma cacao] gi|328924773|gb|ADO64879.2| ribosomal protein S2 [Theobroma cacao] Length = 236 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK++A+D V+ AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 KGKQFLIVGTKNKAADSVVRAAIRARCHYVNKKWLGGMLTNWPTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVVAICEGRS 230 >gi|229844032|ref|ZP_04464173.1| 30S ribosomal protein S2 [Haemophilus influenzae 6P18H1] gi|229813026|gb|EEP48714.1| 30S ribosomal protein S2 [Haemophilus influenzae 6P18H1] Length = 240 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 107/241 (44%), Positives = 159/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ VA+A +G + + + + + Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAVAAAVKEGRGNE-AQVAEELAADA 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|42525107|ref|NP_970487.1| 30S ribosomal protein S2 [Bdellovibrio bacteriovorus HD100] gi|81697725|sp|Q6MGY6|RS2_BDEBA RecName: Full=30S ribosomal protein S2 gi|39577318|emb|CAE81141.1| 30S ribosomal protein S2 [Bdellovibrio bacteriovorus HD100] Length = 313 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 111/269 (41%), Positives = 164/269 (60%), Gaps = 1/269 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++++L++GV FGH+ WNPKM+ Y++ R HIIDL +TV KA + + + Sbjct: 1 MAQVTMKEMLDAGVHFGHQTQRWNPKMKPYVYTARGGIHIIDLQKTVVRANKAAEFVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GGR++FV TK QA + + EAA + QY V +WLGGMMTN++T+ SI +LR ++ + Sbjct: 61 AANGGRLIFVGTKKQAIEPIQEAAAKCGQYYVTKRWLGGMMTNFETIKSSIDRLRKIDTM 120 Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K E TKKER +E++ +L L GIRDM +P MFVVD +E +A+ EA+RL Sbjct: 121 KEKGEFNYLTKKERAKLEKEYLRLTDFLAGIRDMKEMPSAMFVVDLPKEHIAVAEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+ DTNS+P+ VD+ IPGNDD+ RSI LF +LVA A ++G + T Sbjct: 181 IPVVAIADTNSDPESVDFAIPGNDDAIRSIKLFSNLVADAYLEGAKEWEGKLRTMTDKQS 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + +K + E + + +E Sbjct: 241 DVAKEAKADGKEEAPKRRGAGAKAGAKEA 269 >gi|206900304|ref|YP_002250927.1| ribosomal protein S2 [Dictyoglomus thermophilum H-6-12] gi|238058193|sp|B5YEG9|RS2_DICT6 RecName: Full=30S ribosomal protein S2 gi|206739407|gb|ACI18465.1| ribosomal protein S2 [Dictyoglomus thermophilum H-6-12] Length = 246 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 99/240 (41%), Positives = 145/240 (60%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH+ W PKM+ YIF ERN HIIDL +T+ L++A + + Sbjct: 1 MAHILMKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + E AKR + VN +WLGGM+TN+ T+ I + LEEL Sbjct: 61 AKEGKTFLFVGTKKQAQQTIEEEAKRCGAFYVNQRWLGGMLTNFTTIKSRIDYMVKLEEL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KK+ + R+ +KL + DG+R + LPD++++VD RE++A++EA +L Sbjct: 121 KNNGYFEKLPKKQANRLNRELEKLVKVFDGLRGIEKLPDVLYIVDPKREEIAVKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A+VDTN +P+L+ Y IPGNDD+ RSI L +A A ++G + K Sbjct: 181 IPIIAIVDTNCDPELITYPIPGNDDAIRSIKLITSKIADAILEGKDLREKEADLQLKDED 240 >gi|221124408|ref|XP_002163947.1| PREDICTED: similar to ribosomal protein S2 [Hydra magnipapillata] gi|260220935|emb|CBA29001.1| 30S ribosomal protein S2 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 250 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 103/248 (41%), Positives = 157/248 (63%), Gaps = 1/248 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + + A+ Sbjct: 3 VTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFVRQLSAK 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G IL V TK QA + V A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 63 RGTILMVGTKRQAREIVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKVQQEA 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+AI EAR+L IP++ Sbjct: 123 GLDSMSKKEQLMFARELEKLEKDIGGIQDMNTLPDAIFVIDVGYHKIAIAEARKLGIPLI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG-ETV 244 VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A ++G A + + G + Sbjct: 183 GVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAILEGRANAVDDVVKAVAAEGDDEF 242 Query: 245 VHSKEGMQ 252 V E Sbjct: 243 VEVSEASA 250 >gi|283794957|ref|YP_003359348.1| ribosomal protein S2 [Olea europaea] gi|330850732|ref|YP_004376410.1| ribosomal protein S2 [Olea europaea subsp. europaea] gi|281428676|gb|ADA69915.1| ribosomal protein S2 [Olea europaea] gi|291059242|gb|ADD72078.1| ribosomal protein S2 [Olea europaea] gi|328795422|emb|CBR30303.1| ribosomal protein S2 [Olea europaea subsp. europaea] Length = 236 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGARKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|237736209|ref|ZP_04566690.1| SSU ribosomal protein S2P [Fusobacterium mortiferum ATCC 9817] gi|229421762|gb|EEO36809.1| SSU ribosomal protein S2P [Fusobacterium mortiferum ATCC 9817] Length = 250 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 154/225 (68%), Gaps = 2/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A V+ + Sbjct: 1 MAVITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYAVMREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA + V E A+RS Y VN++WLGGM+TN+ T+ +++L++LE++ Sbjct: 61 AEQGGKVLFVGTKKQAQEAVKEQAERSGMYYVNNRWLGGMLTNFATIKTRVERLKELEQM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +TKKE N ++ KL + L GI+DM +P +F+VD +E LAI+EA L Sbjct: 121 EADGTLDTAYTKKEAANFRKELAKLSKNLCGIKDMKEVPAAVFIVDCKKETLAIKEASDL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A I+G Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLISSVMANAIIEG 225 >gi|116617097|ref|YP_817471.1| ribosomal protein S2 [Coffea arabica] gi|122153610|sp|A0A324|RR2_COFAR RecName: Full=30S ribosomal protein S2, chloroplastic gi|116242153|gb|ABJ89668.1| ribosomal protein S2 [Coffea arabica] Length = 236 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKME YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMEPYISAKRKGIHITNLTRTARFLSEACDLVFDAGS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|290487142|gb|ADD29955.1| ribosomal protein S2 [Ilex cornuta] Length = 236 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 MGKKFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|324986424|ref|YP_004276295.1| ribosomal protein S2 [Pinus monophylla] gi|228016055|gb|ACP50893.1| ribosomal protein S2 [Pinus rzedowskii] gi|323522519|gb|ADX94861.1| ribosomal protein S2 [Pinus monophylla] Length = 234 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 90/226 (39%), Positives = 133/226 (58%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLVFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK ++L++ + Sbjct: 67 RGKQFLIVGTKYQATDLVASAATEARCHYVNRKWLGGMLTNWSTTETRLQKFKNLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLQKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQFILNRLTSAICEGRALR 232 >gi|313201221|ref|YP_004039879.1| 30S ribosomal protein S2 [Methylovorus sp. MP688] gi|312440537|gb|ADQ84643.1| ribosomal protein S2 [Methylovorus sp. MP688] Length = 242 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 108/219 (49%), Positives = 154/219 (70%), Gaps = 1/219 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+GV FGH+ WNPKM +IF +RN HI++L +T+P+ + AL+ + A GRIL Sbjct: 1 MLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPLFEDALKYVRQLAANKGRIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FV TK QA D + E A+R+ VN +WLGGM+TN+KTV QSI++L D E +L + Sbjct: 61 FVGTKRQARDIMKEEAERANCAYVNHRWLGGMLTNFKTVKQSIKRLNDYETMLQDGSLDK 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 F KKE L +R+ +KL+R++ GI++MGGLPD +F+VD E A+ EA +L IP++ VVD Sbjct: 121 FGKKEALGYKREVEKLQRSIGGIKEMGGLPDAIFIVDVGHESGAVTEAAKLGIPVIGVVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 TN++PD V YVIPGNDDSSR+I L+ +A A ++G ++ Sbjct: 181 TNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEGRSQ 219 >gi|257467193|ref|ZP_05631504.1| 30S ribosomal protein S2 [Fusobacterium gonidiaformans ATCC 25563] gi|315918323|ref|ZP_07914563.1| SSU ribosomal protein S2P [Fusobacterium gonidiaformans ATCC 25563] gi|313692198|gb|EFS29033.1| SSU ribosomal protein S2P [Fusobacterium gonidiaformans ATCC 25563] Length = 247 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 105/259 (40%), Positives = 159/259 (61%), Gaps = 14/259 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ ++ A + Sbjct: 1 MAVITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIETAYDEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ I++L++LE + Sbjct: 61 VEDGGKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKGRIERLKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE ++ KL + L GI++M +P +FVVD E+LA+ EA L Sbjct: 121 EAEGILDTAYTKKEAATFRKELAKLSKNLTGIKEMKEVPQAIFVVDVKMEELAVTEADHL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD V + IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDKVTFPIPANDDAIRSVKLITSVMANAIVEGNQ------------G 228 Query: 241 GETVVHSKEGMQLEEDSQS 259 ETV + E +Q+EE S Sbjct: 229 KETVEPASEEIQVEEGSAE 247 >gi|228016684|gb|ACP51512.1| ribosomal protein S2 [Pinus aristata] Length = 234 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 90/226 (39%), Positives = 133/226 (58%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMTPYIFTERKDTHIINLAKTARSLSEACDLVFDIAD 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T +QK ++L++ + Sbjct: 67 RGKQFLIVGTKYQATDLVASAATEARCHYVNKKWLGGMLTNWSTTETRLQKFKNLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMRSLPDIAIITNQREESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI + + SA +G A + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQFILNRLTSAICEGRALR 232 >gi|149390431|ref|YP_001294259.1| ribosomal protein S2 [Illicium oligandrum] gi|209573606|sp|A6MMT3|RR2_ILLOL RecName: Full=30S ribosomal protein S2, chloroplastic gi|147917384|gb|ABQ52508.1| ribosomal protein S2 [Illicium oligandrum] Length = 236 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 88/224 (39%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARSLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK +A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKHFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMLTNWFTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++RK L+ L GI+ M GLPD++ ++D E AI+E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRKLSHLQAYLGGIKYMTGLPDIVIIIDQQEEYTAIRECATLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADIPIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|51209981|ref|YP_063645.1| ribosomal protein S2 [Gracilaria tenuistipitata var. liui] gi|68052931|sp|Q6B8R5|RR2_GRATL RecName: Full=30S ribosomal protein S2, chloroplastic gi|50657735|gb|AAT79720.1| 30S ribosomal protein S2 [Gracilaria tenuistipitata var. liui] Length = 231 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 138/224 (61%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +LLE+G FGH+ WNP+M YI+ ERN HIIDL QT +L +A Q I D Sbjct: 1 MSIVSLSELLEAGAHFGHQARRWNPRMFPYIYTERNGIHIIDLVQTAQLLTEACQFIRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G + LF+ TK QA+ + E A RS Y VN +WLGGM+TNW T+ +++L+ LE Sbjct: 61 SQEGKKFLFLGTKRQAAGVIAEQAIRSNSYYVNQRWLGGMLTNWMTIKSRVERLQRLEMD 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE R+ DKL++ L+GI++M LPD + VVD RE AIQE +L Sbjct: 121 EQAGLIDMLPKKEAAINRRELDKLRKNLNGIKNMSRLPDFIVVVDQKRETTAIQECIKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI+ ++DTN NP+++D IP NDD+ RSI L +A + I+G Sbjct: 181 IPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISRIADSIIEG 224 >gi|256827635|ref|YP_003151594.1| 30S ribosomal protein S2P [Cryptobacterium curtum DSM 15641] gi|256583778|gb|ACU94912.1| SSU ribosomal protein S2P [Cryptobacterium curtum DSM 15641] Length = 294 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 99/248 (39%), Positives = 156/248 (62%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I+ L+++G FGH+ WNPKM+ +IF R + +IIDL +T+ + +A +S Sbjct: 1 MEKVSIQTLVDAGAHFGHQTRRWNPKMKPFIFGSRGDIYIIDLKKTLIGMDEAYSFVSTL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA + + EAA VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 61 AANGGTILFVGTKKQAQEPIAEAANSCGMPYVNARWLGGMLTNFVTIRSRVSRMEELEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE++ + ++ KL+ L+GIR+M +PD +FVVDTNRE ++I+EA+RL Sbjct: 121 DADGRMEKLPKKEQILLHKELTKLQTNLNGIRNMKRVPDAIFVVDTNRELISIREAQRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +PIV ++DTN +PD V++ IP NDD+ RS+ LFC+ +A A I GI S + A Sbjct: 181 VPIVGLIDTNCDPDDVNFGIPANDDAIRSVKLFCNFIAQAVIAGIGAPVSAAEFLAEDAP 240 Query: 242 ETVVHSKE 249 E + Sbjct: 241 ERAADKVD 248 >gi|94986821|ref|YP_594754.1| 30S ribosomal protein S2 [Lawsonia intracellularis PHE/MN1-00] gi|122988787|sp|Q1MRE3|RS2_LAWIP RecName: Full=30S ribosomal protein S2 gi|94731070|emb|CAJ54433.1| ribosomal protein S2 [Lawsonia intracellularis PHE/MN1-00] Length = 291 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 112/277 (40%), Positives = 172/277 (62%), Gaps = 10/277 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A I +T Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLYRAAHDKIVET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG +LFV TK QA + + A R+ QY V ++W+GG +TN+ T+ +SI++L LE + Sbjct: 61 VAAGGSVLFVGTKRQAQEAIATEATRAGQYYVANRWMGGTLTNFSTIQKSIERLNRLETM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + KKE L + R+ DKL+ L GI++M LP L+F++D +RE +A++E R+L Sbjct: 121 FSDGSVNRYQKKEILTLNREMDKLELTLGGIKNMERLPQLIFIIDPHRENIAVKEGRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+AV DTN +PDL+DY+IPGNDD+ R+I LF +A A I+G A Q + + Sbjct: 181 IPIMAVTDTNCDPDLIDYIIPGNDDAIRAIKLFVTAMADACIEGEALQKDTKNKNLE--- 237 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 +E Q+ + ES+ ++ + + + + Sbjct: 238 ------EELKQIATAECNKESTSIEQELIIASEQTET 268 >gi|197294115|ref|YP_002149736.1| ribosomal protein S2 [Cicer arietinum] gi|197089803|gb|ACH41073.1| ribosomal protein S2 [Cicer arietinum] Length = 236 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NITFEEMMEAGVHFGHDTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK +A+D V AA R+ + VN KWLGGM+TNW T ++K RD E Sbjct: 67 RGKQFLIVGTKKKAADSVTRAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M LPD++ +VD + A++E L IP Sbjct: 127 TGKPNSLPKRDAAMLKRQLSHLETYLGGIKYMTRLPDIVIIVDQQEDYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTNS+PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNSDPDLADIPIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|332530835|ref|ZP_08406761.1| 30S ribosomal protein S2 [Hylemonella gracilis ATCC 19624] gi|332039747|gb|EGI76147.1| 30S ribosomal protein S2 [Hylemonella gracilis ATCC 19624] Length = 249 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 100/248 (40%), Positives = 156/248 (62%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKM +IF R+ HII+L +++PM Q+A + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRSKIHIINLEKSLPMFQEAAKFAKQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R G ILFV TK A + V A+R+ V+ +WLGGM+TN+KTV S+++L+D++ Sbjct: 62 RRGTILFVGTKRTAREIVAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSLKRLKDMKVQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE+L +R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP+ Sbjct: 122 AGLDAMSKKEQLMFQRELEKLEKDIGGIQDMATLPDAIFVIDVGYHKIAVAEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A ++G A + + G+ Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAILEGRANAVEDVVKAVSAEGDDE 241 Query: 245 VHSKEGMQ 252 E Sbjct: 242 FVEVENAA 249 >gi|237745595|ref|ZP_04576075.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes HOxBLS] gi|229376946|gb|EEO27037.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes HOxBLS] Length = 245 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 109/255 (42%), Positives = 160/255 (62%), Gaps = 12/255 (4%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M A+ I A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLAMYNDAMNYIRQLSA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G IL V TK QA D + A+R+ V+ +WLGGM+TN+KT+ SI++L+D+E + Sbjct: 62 NRGTILMVGTKRQARDIIASEAQRAGMPYVDQRWLGGMLTNFKTIRTSIKRLKDMEAAIE 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KKE L +R+ KL++A+ GI+DM GLPD +FVVD K A+ EA++L IP Sbjct: 122 DGTVDKMSKKEGLMFQREVAKLQKAIGGIKDMNGLPDAIFVVDVGYHKGAVTEAQKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ + YVIPGNDDSS++I L+ VA A ++G A SA + Sbjct: 182 VIGVVDTNHSPEGLAYVIPGNDDSSKAIQLYARGVADAILEGRA-----------SAMQD 230 Query: 244 VVHSKEGMQLEEDSQ 258 V+ + +G EE +Q Sbjct: 231 VLETVKGESGEEAAQ 245 >gi|290487138|gb|ADD29953.1| ribosomal protein S2 [Dillenia indica] Length = 236 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFNAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITFGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|262198482|ref|YP_003269691.1| ribosomal protein S2 [Haliangium ochraceum DSM 14365] gi|262081829|gb|ACY17798.1| ribosomal protein S2 [Haliangium ochraceum DSM 14365] Length = 291 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 117/274 (42%), Positives = 168/274 (61%), Gaps = 4/274 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE+GV FGH WNPKM YIF RN HI+DL QTV + ++A Q I D AR Sbjct: 15 ISLRALLEAGVHFGHNTGRWNPKMRPYIFGARNGIHIVDLQQTVTLFRQAFQAIIDVCAR 74 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++LFV TK QA+D + + A R+ Q+ V +WLGG +TN+KTV QS+ +L LE+L Sbjct: 75 GEKVLFVGTKKQAADVIRDEAARADQFHVTDRWLGGTLTNFKTVKQSLDRLARLEKLEED 134 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE++ I R++DKL ++L GI+ M LP +MFV+D +E +A+ EAR+L IP+ Sbjct: 135 GTLYQLSKKEQIFIRREQDKLMKSLGGIKSMTKLPGMMFVIDPGKEHIAVAEARKLEIPV 194 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG---IARQHSYMGADTKSAG 241 VA+ DTN +PD+VD+VIPGNDD+ R+I LF +A AA+ G + + + + Sbjct: 195 VAITDTNCDPDVVDFVIPGNDDAIRAIRLFASRIADAAVIGSRLFSERAAGRSKEQPEPQ 254 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E V+H G ++ E + PE Sbjct: 255 EQVIHISSGGDGPRVELAATGGSQLTPEASASPE 288 >gi|116327673|ref|YP_797393.1| 30S ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|209573706|sp|Q04U72|RS2_LEPBJ RecName: Full=30S ribosomal protein S2 gi|116120417|gb|ABJ78460.1| 30S Ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 294 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 105/281 (37%), Positives = 163/281 (58%), Gaps = 8/281 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + Sbjct: 1 MSVISMKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QA + A S + +N++W GG++TNW TV +SI +L+ LE + Sbjct: 61 TSEGKKVLFVGTKKQARGAIEREALHSNMFFINNRWPGGLLTNWNTVKKSIARLKKLEAM 120 Query: 123 LNK---ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+ Sbjct: 121 EADNSFEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--QHSYMGADT 237 L + I AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G + D Sbjct: 181 LGLKIFAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEGTGGVVEQPRFSEDL 240 Query: 238 KSAG---ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 S E E + D + + V E Sbjct: 241 DSEALALEYQGEYDESGKFIMDEDADSKKSKAEEPVIPTAE 281 >gi|254303392|ref|ZP_04970750.1| ribosomal protein S2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323584|gb|EDK88834.1| ribosomal protein S2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 247 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 98/247 (39%), Positives = 160/247 (64%), Gaps = 3/247 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ + I+++++LE++ Sbjct: 61 AEDGGKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKKRIERMKELEKM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 121 DAEGILDSDYTKKEAAEFRKELSKLSKNLSGIRDMERVPDAIYVVDVKMEELPVKEAHLL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR-QHSYMGADTKS 239 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G ++ ++ + Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEGNQGIENVEPQSEEVN 240 Query: 240 AGETVVH 246 E V Sbjct: 241 VEEGSVE 247 >gi|330814007|ref|YP_004358246.1| SSU ribosomal protein S2p (SAe) [Candidatus Pelagibacter sp. IMCC9063] gi|327487102|gb|AEA81507.1| SSU ribosomal protein S2p (SAe) [Candidatus Pelagibacter sp. IMCC9063] Length = 267 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 127/264 (48%), Positives = 178/264 (67%), Gaps = 6/264 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LP TI+ LLE+GV GH+ F WNPKM+ +IF E+N+ HIIDLSQT+ +L KAL + Sbjct: 1 MNLPSVTIKDLLEAGVHLGHKTFRWNPKMKPFIFGEKNSVHIIDLSQTLELLNKALLELH 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + G+ILFV+TK QAS+ V AK + + VN +WLGGM+TNW T+++SI++L+ +E Sbjct: 61 RCASNNGKILFVSTKKQASELVANVAKETNNFYVNHRWLGGMLTNWNTINKSIKRLKRIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E L E+ GFTKKE + + +++KL R+L GI +M LPD++F++DTN E LA+ EA++L Sbjct: 121 EDLKLEDTGFTKKELIKMSMEKEKLDRSLGGIANMKKLPDMIFIIDTNIESLAVLEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID------GIARQHSYMG 234 IPIVAVVD+NSNP+ +D+ IPGNDD+ RSI L+CDL D G Q S + Sbjct: 181 NIPIVAVVDSNSNPEFIDFPIPGNDDARRSIDLYCDLALKTIQDAQSKMSGDKDQVSNIS 240 Query: 235 ADTKSAGETVVHSKEGMQLEEDSQ 258 ++ E SK + LE D + Sbjct: 241 DISEKVSEIKKESKPEVSLEIDKK 264 >gi|306486199|gb|ADM92741.1| ribosomal protein S2 [Davidia involucrata] Length = 236 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKAKAADSVARAALRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRLRRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|261856050|ref|YP_003263333.1| ribosomal protein S2 [Halothiobacillus neapolitanus c2] gi|261836519|gb|ACX96286.1| ribosomal protein S2 [Halothiobacillus neapolitanus c2] Length = 244 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 107/242 (44%), Positives = 152/242 (62%), Gaps = 2/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++RQ++E+GV FGH+ WNP M YIF +RN HII+L +TVPM AL IS Sbjct: 1 MASVSMRQMIEAGVHFGHQTRYWNPGMAPYIFGQRNRIHIINLEKTVPMFNDALNFISKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG I+FV TK A D V E A R VN +WLGGMMTN+ TV QS+++L+ L+ + Sbjct: 61 VGGGGTIMFVGTKRSARDTVAEEAARCGMPYVNHRWLGGMMTNYATVRQSVRRLKTLQTM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE L + R+R+KL+R+L GI+DM LP+ +FV+D E +A+ EA++L Sbjct: 121 EQDGSLAKLNKKEGLMMTREREKLERSLGGIQDMDRLPNALFVIDVGHEDIAVIEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ +VDTNS+ +DYVIPGNDD+ R+I L+ VA ++ + +D A Sbjct: 181 IPVIGIVDTNSSSKGIDYVIPGNDDAIRAIQLYAHAVAETVLEAKGAS-AIAPSDFVEAA 239 Query: 242 ET 243 E Sbjct: 240 EA 241 >gi|69216171|gb|AAZ03902.1| ribosomal protein S2 [Ginkgo biloba] Length = 232 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH+ WNP+M YI ER HII+L++T L +A + D Sbjct: 7 NINLEEMMEAGVHFGHQARKWNPRMSPYISTERRGIHIINLAKTARSLSEACDFVFDAAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ + Sbjct: 67 KGKQFPIVGTKYQAADLVASAAIGARCHYVNKKWLGGMLTNWSTTETRPQKFKDLKKERD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++ + +L++ GI+ M LPD++ +VD E AI E L IP Sbjct: 127 TGRFNRPPKKETAMLKGQLSQLQKYPGGIKYMTSLPDIVIIVDQQEEYTAIGECIILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+ +PDL+D IP NDD+ SI L + + SA +G Sbjct: 187 TICLVDTDCDPDLIDVPIPANDDARASIRLILNKLTSAICEGR 229 >gi|262066281|ref|ZP_06025893.1| ribosomal protein S2 [Fusobacterium periodonticum ATCC 33693] gi|294783618|ref|ZP_06748942.1| ribosomal protein S2 [Fusobacterium sp. 1_1_41FAA] gi|291379976|gb|EFE87494.1| ribosomal protein S2 [Fusobacterium periodonticum ATCC 33693] gi|294480496|gb|EFG28273.1| ribosomal protein S2 [Fusobacterium sp. 1_1_41FAA] Length = 247 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 97/247 (39%), Positives = 158/247 (63%), Gaps = 3/247 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN H+IDL +++ +++A + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQAKRWNPKMKKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+RS Y +N++WLGGM+TN+ T+ + I+++++LE + Sbjct: 61 AEDGGKVLFVGTKKQAQEAIKEQAERSGMYYINNRWLGGMLTNFSTIKKRIERMKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +TKKE ++ KL + L GIRDM PD ++VVD E+L ++EA L Sbjct: 121 DADGTLDSDYTKKEAAEFRKELSKLSKNLSGIRDMEKAPDAIYVVDVKMEELPVREAHLL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG-IARQHSYMGADTKS 239 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G +H ++ + Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEGNQGHEHVEPQSEEVN 240 Query: 240 AGETVVH 246 E V Sbjct: 241 VEEGSVE 247 >gi|159903551|ref|YP_001550895.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9211] gi|238687107|sp|A9BAS9|RS2_PROM4 RecName: Full=30S ribosomal protein S2 gi|159888727|gb|ABX08941.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9211] Length = 238 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 93/233 (39%), Positives = 138/233 (59%), Gaps = 1/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL +T + A + + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVKTAVCMNSAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 AKSGKRFLFVGTKKQASEVVALEANRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEASVLRHELERLQKYLGGLKGMKRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + + G Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRHGSNEHRG 233 >gi|254432784|ref|ZP_05046487.1| ribosomal protein S2 [Cyanobium sp. PCC 7001] gi|197627237|gb|EDY39796.1| ribosomal protein S2 [Cyanobium sp. PCC 7001] Length = 229 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 96/227 (42%), Positives = 136/227 (59%), Gaps = 1/227 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + G R L Sbjct: 1 MMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSAARSGKRFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FV TK QAS+ + A R VN +WLGGM+TNW T+ I++L+DLE + + Sbjct: 61 FVGTKKQASEVIALEATRCGAAYVNQRWLGGMLTNWTTMRARIERLKDLERMESSGAIAM 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE + R+ D+L++ L G+++M LPD++ +VD RE A+ EAR+L IP+V+++D Sbjct: 121 RPKKEAAVLRRELDRLQKYLGGLKNMRRLPDVVVLVDQRRETNAVLEARKLDIPLVSMLD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 TN +PDL D IP NDD+ RS+ L +A A +G AD Sbjct: 181 TNCDPDLCDVPIPCNDDAVRSVQLVLGRLADAINEGRHGSSDQAQAD 227 >gi|123968349|ref|YP_001009207.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. AS9601] gi|126696151|ref|YP_001091037.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9301] gi|157413182|ref|YP_001484048.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9215] gi|166225294|sp|A3PCG1|RS2_PROM0 RecName: Full=30S ribosomal protein S2 gi|166225297|sp|A2BQN9|RS2_PROMS RecName: Full=30S ribosomal protein S2 gi|167011237|sp|A8G4D1|RS2_PROM2 RecName: Full=30S ribosomal protein S2 gi|123198459|gb|ABM70100.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. AS9601] gi|126543194|gb|ABO17436.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9301] gi|157387757|gb|ABV50462.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9215] Length = 234 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 91/231 (39%), Positives = 140/231 (60%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + Sbjct: 1 MAVVSLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + Sbjct: 61 AKSGKRFLFVGTKKQASDVVAQEATRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGSIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 I +V+++DTN +PDL + IP NDD+ RS+ L +A A +G ++ Sbjct: 181 ISLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRKGSNAE 231 >gi|254527117|ref|ZP_05139169.1| ribosomal protein S2 [Prochlorococcus marinus str. MIT 9202] gi|221538541|gb|EEE40994.1| ribosomal protein S2 [Prochlorococcus marinus str. MIT 9202] Length = 234 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 91/231 (39%), Positives = 140/231 (60%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + Sbjct: 1 MAVVSLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNDAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + Sbjct: 61 AKSGKRFLFVGTKKQASDVVAQEATRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGSIAMRPKKEAAVLRRELERLQKYLGGLKSMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 I +V+++DTN +PDL + IP NDD+ RS+ L +A A +G ++ Sbjct: 181 ISLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRKGSNAE 231 >gi|51473262|ref|YP_067019.1| 30S ribosomal protein S2 [Rickettsia typhi str. Wilmington] gi|61215503|sp|Q68XV5|RS2_RICTY RecName: Full=30S ribosomal protein S2 gi|51459574|gb|AAU03537.1| 30S ribosomal protein S2 [Rickettsia typhi str. Wilmington] Length = 295 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 130/274 (47%), Positives = 185/274 (67%), Gaps = 8/274 (2%) Query: 3 LPQFT---IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 + + + I++LL++GV FGH+ WNPKM YI+ ER++ HIIDL Q+ ++ AL I Sbjct: 1 MSKISPINIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 +TV + G+ILFV+TK QASD + E A++ QY VN++WLGGM+TNWKT++ SI+KL L Sbjct: 61 YETVKKDGKILFVSTKIQASDIIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKL 120 Query: 120 EELLNKENQG--FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 E+ L E +TKKE L++ RK+DKL +L GIR++ PDL+ V+DTN+E +AI EA Sbjct: 121 EKTLESEETRVCYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEA 180 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 +L IPIVAVVDTNSNPD ++Y IPGNDDS RSI L+C L A AA+ G+ G D Sbjct: 181 VKLNIPIVAVVDTNSNPDNINYPIPGNDDSIRSIRLYCSLFADAALQGLEESMKVSGVDI 240 Query: 238 KSAGE---TVVHSKEGMQLEEDSQSSESSVLDGQ 268 + E + SK +L++ + S++ +D + Sbjct: 241 GTMQEHTDKALTSKTISKLKQTKKFSKTQNIDEE 274 >gi|114329957|ref|YP_740639.1| ribosomal protein S2 [Nandina domestica] gi|122165972|sp|Q09FX2|RR2_NANDO RecName: Full=30S ribosomal protein S2, chloroplastic gi|114054459|gb|ABI49852.1| ribosomal protein S2 [Nandina domestica] Length = 236 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 67 RGKQFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRFNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRFILNKLVSAICEGRS 230 >gi|90408934|ref|ZP_01217069.1| 30S ribosomal protein S2 [Psychromonas sp. CNPT3] gi|90309962|gb|EAS38112.1| 30S ribosomal protein S2 [Psychromonas sp. CNPT3] Length = 243 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 108/228 (47%), Positives = 155/228 (67%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM KAL + Sbjct: 1 MANVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNKALNFLEAK 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G++LFV TK AS+ V EAA Q+ V+ +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AAKKGKVLFVGTKRAASEVVKEAALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ KL + L GI++MGG+PD++FVVD + E ++I+EA L Sbjct: 121 SKDGTFEQLTKKEALMRSRELIKLDKTLGGIKNMGGIPDVIFVVDADHEHISIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP++A+VDTNS PD +D+V+PGNDD+ R+I L+ + A D A + Sbjct: 181 IPVIAIVDTNSCPDNIDFVVPGNDDAIRAIKLYLEAAAQTINDARATE 228 >gi|237753464|ref|ZP_04583944.1| 30S ribosomal protein S2 [Helicobacter winghamensis ATCC BAA-430] gi|229375731|gb|EEO25822.1| 30S ribosomal protein S2 [Helicobacter winghamensis ATCC BAA-430] Length = 265 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 110/257 (42%), Positives = 162/257 (63%), Gaps = 1/257 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM++YIF R N HIIDL +T+ + ++ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI+KL +EE+ + Sbjct: 62 GKTIMFVGTKKQASETLKQYAESVQAPYVNYRWLGGMLTNFSTIKKSIRKLEIIEEMESS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R + PD++FV+D +EK+A+ EARRL IP+ Sbjct: 122 GQIDLLTKKEKLMILRKKEKLTQYLGGVRHLKKAPDMIFVIDAAKEKIAVAEARRLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VD+ IPGNDD+ RSI LFC +A A +G A A S Sbjct: 182 VAPLDTNCDPDMVDFPIPGNDDAIRSIQLFCKEMAEAITEGRAIAGGEAVAGEVSEEVVP 241 Query: 245 VHSKEGMQLEEDSQSSE 261 +E ++ +++ + E Sbjct: 242 ASEEEKQEVIQEAMTEE 258 >gi|139387241|ref|YP_001123362.1| ribosomal protein S2 [Capsella bursa-pastoris] gi|209573639|sp|A4QKI1|RR2_CAPBU RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286562|dbj|BAF50186.1| ribosomal protein S2 [Capsella bursa-pastoris] Length = 236 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVARAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|323149071|ref|YP_004222635.1| ribosomal protein S2 [Anthriscus cerefolium] gi|289645564|gb|ADD13627.1| ribosomal protein S2 [Anthriscus cerefolium] Length = 236 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 131/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMKAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 Q K++ ++R+ L+ L GI+ M GLPD++ ++D + E A+QE L IP Sbjct: 127 TGRLQSLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQHEEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TISLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAIREGRS 230 >gi|123966064|ref|YP_001011145.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9515] gi|166225296|sp|A2BW77|RS2_PROM5 RecName: Full=30S ribosomal protein S2 gi|123200430|gb|ABM72038.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9515] Length = 234 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 138/234 (58%), Gaps = 1/234 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + Sbjct: 1 MAVVSLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + Sbjct: 61 AKSGKRFLFVGTKKQASDVVAQEAVRCGAAYVNQRWLGGMLTNWSTMKARIERLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 I +V+++DTN +PDL + IP NDD+ RS+ L +A A +G + Sbjct: 181 ISLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRKGSNDQRKV 234 >gi|319940994|ref|ZP_08015331.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 3_1_45B] gi|319805567|gb|EFW02362.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 3_1_45B] Length = 255 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 105/240 (43%), Positives = 158/240 (65%), Gaps = 2/240 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R++LE+G FGH+ WNPKM +YIF RN HII+L +TV M +A++ ++ Sbjct: 2 VSMREMLEAGCHFGHQTRFWNPKMAQYIFGSRNKIHIINLEKTVVMFDEAVKFARQLASQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 GGRILFV TK + V + A+R+ V+ +WLGG +TN+KTV +I++L+D+EE L + Sbjct: 62 GGRILFVDTKRGGREIVAQEAQRAGCCWVDQRWLGGTLTNFKTVRGTIKRLKDMEEQLED 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 TKKE L+ +R +KL +++ GI+D+ GLPD +F+VD K+A+QEA +L IP+ Sbjct: 122 GTAAKLTKKEALDFQRHVEKLNKSIGGIKDLNGLPDALFIVDVGYHKIAVQEANKLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + VVDTN +PD +DYVIPGNDDSS+++ ++ +A A I G A + K+A E Sbjct: 182 IGVVDTNGSPDGIDYVIPGNDDSSKAVQIYAAGIADAVIAGRADS-AVAAEGEKAADEEF 240 >gi|206890593|ref|YP_002249337.1| ribosomal protein S2 [Thermodesulfovibrio yellowstonii DSM 11347] gi|238058201|sp|B5YGD9|RS2_THEYD RecName: Full=30S ribosomal protein S2 gi|206742531|gb|ACI21588.1| ribosomal protein S2 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 261 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 114/266 (42%), Positives = 168/266 (63%), Gaps = 6/266 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+G FGH+ WNPKM++YIF ERN HIIDL +TV +++A + + Sbjct: 1 MSVVTMKELLEAGAHFGHQVKRWNPKMKKYIFAERNGIHIIDLQKTVKGIEEAYEFLKTV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG ILFV TK QA D + E AKR+ + VN +WLGGM+TN+ TV +S++K + +E++ Sbjct: 61 SAEGGSILFVGTKKQAQDAIQEEAKRAGVFYVNHRWLGGMLTNFATVRKSVEKWQRIEQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE E++R KL+ L GI+DM +P +F+VD +EK+A++EA +L Sbjct: 121 KEDGTLYLHTKKEIAKYEKERQKLELNLIGIKDMMEIPKAIFIVDIKKEKIAVEEAIKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTN +PDLVDYVIPGNDD+ R+I L +A A ++G + + + A Sbjct: 181 IPIAAIVDTNCDPDLVDYVIPGNDDAIRAIKLITSKMADAILEGKEIFMKKLEEEAEKAA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG 267 KE + EE+ Q S ++ Sbjct: 241 -----IKEKILQEEEYQKSMDEYIEE 261 >gi|88812377|ref|ZP_01127627.1| ribosomal protein S2 [Nitrococcus mobilis Nb-231] gi|88790384|gb|EAR21501.1| ribosomal protein S2 [Nitrococcus mobilis Nb-231] Length = 256 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 107/236 (45%), Positives = 156/236 (66%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+RQ+LE+GV FGH+ W+PKM YIF +RN HI++L +T+P+ +A+ + Sbjct: 1 MARVTMRQMLEAGVHFGHQTRYWDPKMAPYIFGQRNKIHIVNLEKTLPLYDEAMNYLGRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GGRILFV TK A + + E A R A VN +WLGGM+TN++TV +SI++ +DL++ Sbjct: 61 AANGGRILFVGTKRAAREALREEAVRCAMPYVNHRWLGGMLTNFRTVKRSIRRYKDLQQQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L++ R+ KL+RA GI DM LPD +FV+DT E++A+ EAR+L Sbjct: 121 EKDGTFNKLSKREVLSLHREMGKLERAFGGIVDMEALPDALFVIDTGFERIAVLEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+VAVVDTN++P +DYVIPGNDD+ R++ L+ A A ID G D Sbjct: 181 IPVVAVVDTNNSPRAIDYVIPGNDDAFRAVRLYLKGAADAIIDARMVGIRPSGDDE 236 >gi|217967590|ref|YP_002353096.1| ribosomal protein S2 [Dictyoglomus turgidum DSM 6724] gi|226697638|sp|B8E2Y2|RS2_DICTD RecName: Full=30S ribosomal protein S2 gi|217336689|gb|ACK42482.1| ribosomal protein S2 [Dictyoglomus turgidum DSM 6724] Length = 246 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++QLLE+GV FGH+ W PKM+ YIF ERN HIIDL +T+ L++A + + Sbjct: 1 MAHILMKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQ 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LFV TK QA + E AKR + VN +WLGGM+TN+ T+ I + LEEL Sbjct: 61 AKEGKTFLFVGTKKQAQQTIEEEAKRCGAFYVNQRWLGGMLTNFTTIKSRIDYMIKLEEL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N KK+ + R+ +KL + DG+R + +PD++++VD RE++A++EA +L Sbjct: 121 KNNGYFDKLPKKQANRLNRELEKLIKVFDGLRGIERIPDVLYIVDPKREEIAVKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A+VDTN +P+L+ Y IPGNDD+ RSI L +A A ++G + K Sbjct: 181 IPIIAIVDTNCDPELITYPIPGNDDAIRSIKLITSKIADAILEGRDLREKEADLQLKDED 240 >gi|59802284|ref|YP_208996.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA 1090] gi|239999943|ref|ZP_04719867.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02] gi|240013111|ref|ZP_04720024.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI18] gi|254492702|ref|ZP_05105873.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 1291] gi|268595749|ref|ZP_06129916.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02] gi|268600187|ref|ZP_06134354.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11] gi|268600288|ref|ZP_06134455.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18] gi|268602520|ref|ZP_06136687.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1] gi|268681069|ref|ZP_06147931.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332] gi|268685253|ref|ZP_06152115.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679] gi|268685549|ref|ZP_06152411.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035] gi|291044915|ref|ZP_06570624.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2] gi|293397988|ref|ZP_06642194.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae F62] gi|75507281|sp|Q5F5F3|RS2_NEIG1 RecName: Full=30S ribosomal protein S2 gi|59719179|gb|AAW90584.1| putative 30S ribosomal protein S2 [Neisseria gonorrhoeae FA 1090] gi|226511742|gb|EEH61087.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 1291] gi|268549138|gb|EEZ44556.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02] gi|268584318|gb|EEZ48994.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11] gi|268584419|gb|EEZ49095.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18] gi|268586651|gb|EEZ51327.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1] gi|268621353|gb|EEZ53753.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332] gi|268625537|gb|EEZ57937.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679] gi|268625833|gb|EEZ58233.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035] gi|291011809|gb|EFE03805.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2] gi|291611934|gb|EFF41003.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae F62] Length = 242 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 114/242 (47%), Positives = 166/242 (68%), Gaps = 2/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSA 240 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + + A ++A Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQALQETVAAAQETA 240 Query: 241 GE 242 E Sbjct: 241 AE 242 >gi|163839285|ref|YP_001623690.1| 30S ribosomal protein S2 [Renibacterium salmoninarum ATCC 33209] gi|189045002|sp|A9WL07|RS2_RENSM RecName: Full=30S ribosomal protein S2 gi|162952761|gb|ABY22276.1| SSU ribosomal protein S2P [Renibacterium salmoninarum ATCC 33209] Length = 294 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 112/267 (41%), Positives = 177/267 (66%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P T+RQLL SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + +A + + T Sbjct: 1 MPVVTMRQLLNSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSLSYIDRAYEFVKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VA GG +LFV TK QA + + E + R Q VN +WLGGM+TN++TV++ IQ++++LEE Sbjct: 61 VAHGGTVLFVGTKKQAQEAIAEQSTRVGQPYVNHRWLGGMLTNFQTVAKRIQRMKELEEI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G TKKE L ++R+ KL+ L GIR++ +P +++VDT +E LAI EA++L Sbjct: 121 NFEDVASSGHTKKELLLLKRELTKLEGNLGGIRNLNKVPSTIWIVDTKKEHLAIDEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM-GADTKS 239 IP+VA++DTN +PD VD+ IPGNDD+ RS+ L ++A A +G+ +++ G+ + Sbjct: 181 NIPVVAILDTNCDPDEVDFPIPGNDDAIRSVNLLTRVIADAVAEGLIARNAKATGSAEGT 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD 266 A E + + + +S ++E+ V + Sbjct: 241 AAEPLAEWERELL---ESSNTEAPVAE 264 >gi|311694056|gb|ADP96929.1| 30S ribosomal protein S2 [marine bacterium HP15] Length = 245 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 114/253 (45%), Positives = 161/253 (63%), Gaps = 9/253 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM ++IF RN HII+L QTVP + AL+ + Sbjct: 1 MRDLLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNDALKFVQQLAENKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK A+ + E A+R+ Q VN +WLGGM+TN+KT+ QSI++ RDLE + Sbjct: 61 KILFVGTKRAAAKIIKEEAERAGQPFVNHRWLGGMLTNYKTIRQSIRRYRDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L+ R+ D+L+R++ GI+DMGGLPD MFV+D + E++AI+EA +L IP++ Sbjct: 121 FDKLTKKEALDRTREMDRLERSIGGIKDMGGLPDAMFVIDVDHERIAIKEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTNS+PD VDYVIPGNDD+ R+I ++ VA ++ A Q + GAD V Sbjct: 181 VVDTNSDPDGVDYVIPGNDDAIRAIQIYVKAVADTCME--AAQSAGAGADE------FVE 232 Query: 247 SKEGMQLEEDSQS 259 E + + Sbjct: 233 VSEDAEGAAPAAE 245 >gi|113955131|ref|YP_730483.1| 30S ribosomal protein S2 [Synechococcus sp. CC9311] gi|123132587|sp|Q0IAN9|RS2_SYNS3 RecName: Full=30S ribosomal protein S2 gi|113882482|gb|ABI47440.1| ribosomal protein S2 [Synechococcus sp. CC9311] Length = 238 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 93/225 (41%), Positives = 137/225 (60%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL QT + A + + Sbjct: 1 MAVVTLAEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVQTAVCMNNAYKWVRSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVAQEALRCGSSYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G+++M +PD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKNMRRIPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I +V+++DTN +PDL + IP NDD+ RSI L +A A +G Sbjct: 181 ISLVSMLDTNCDPDLCEVPIPCNDDAVRSIQLVLSRLADAINEGR 225 >gi|152980757|ref|YP_001353748.1| small subunit ribosomal protein S2 [Janthinobacterium sp. Marseille] gi|151280834|gb|ABR89244.1| small subunit ribosomal protein S2 [Janthinobacterium sp. Marseille] Length = 264 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 106/246 (43%), Positives = 162/246 (65%), Gaps = 2/246 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M Q+A++ I + Sbjct: 18 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLSS 77 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-LL 123 G +LFV TK QA + + A+R+ V+ +WLGGM+TN+KT+ SI++L+++E + Sbjct: 78 NRGTVLFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASIE 137 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + Q +KKE L ER++ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP Sbjct: 138 DGSVQKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIP 197 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ V YVIPGNDDSS++I L+ VA A ++G A + + ++ G+ Sbjct: 198 VIGVVDTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRANATNDL-VESIKGGDD 256 Query: 244 VVHSKE 249 V E Sbjct: 257 FVEVSE 262 >gi|17129592|dbj|BAB72234.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573640|dbj|BAD04071.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573644|dbj|BAD04073.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573646|dbj|BAD04074.1| ribosomal protein subunit 2 [Cistanche deserticola] gi|39573648|dbj|BAD04075.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRFNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGR 229 >gi|229845964|ref|ZP_04466076.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] gi|229810968|gb|EEP46685.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] Length = 240 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 159/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFEKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGVDHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|229577743|ref|YP_002836079.1| ribosomal protein S2 [Megaleranthis saniculifolia] gi|226933871|gb|ACO92004.1| ribosomal protein S2 [Megaleranthis saniculifolia] Length = 236 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK++A+D V A+ R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKQFLIVGTKNKAADSVASASIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA ++G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAILEGRS 230 >gi|317046162|ref|YP_004072451.1| ribosomal protein S2 [Corynocarpus laevigata] gi|309252879|gb|ADO60299.1| ribosomal protein S2 [Corynocarpus laevigata] Length = 236 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 127/226 (56%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ + D E A+QE L IP Sbjct: 127 TGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIGDQQEEYRALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSS 232 >gi|290487136|gb|ADD29952.1| ribosomal protein S2 [Aucuba japonica] Length = 236 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMASYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++ +D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKVADSVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLLDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|241764757|ref|ZP_04762766.1| ribosomal protein S2 [Acidovorax delafieldii 2AN] gi|241365747|gb|EER60419.1| ribosomal protein S2 [Acidovorax delafieldii 2AN] Length = 250 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 102/249 (40%), Positives = 158/249 (63%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM YIF RN HII+L +++P+ Q+A + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFAKQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA + + A+R+ V+ +WLGGM+TN+KTV SI++L+D++ L Sbjct: 62 NRGTILMVGTKRQAREILATEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQLE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE+L R+ +KL++ + GI+DM LPD +F++D K+A+ EA++L IP+ Sbjct: 122 TGLDSLSKKEQLTFSREIEKLEKDIGGIQDMAALPDAIFIIDVGFHKIAVAEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 + VVDTN +P+ +DYVIPGNDDS++++ L+ +A A I+G A + + A G+ Sbjct: 182 IGVVDTNHSPEGIDYVIPGNDDSAKAVTLYARGIADAIIEGRANAVNEVVKAVAAEGGDE 241 Query: 244 VVHSKEGMQ 252 V +E Sbjct: 242 FVEVQESAA 250 >gi|33240275|ref|NP_875217.1| 30S ribosomal protein S2 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|61215706|sp|Q7VCB6|RS2_PROMA RecName: Full=30S ribosomal protein S2 gi|33237802|gb|AAP99869.1| Ribosomal protein S2 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 238 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 92/233 (39%), Positives = 137/233 (58%), Gaps = 1/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +++E+G FGH+ WNPKM RYI+C RN HIIDL +T + A + + Sbjct: 1 MAVVTLSEMMEAGAHFGHQTRRWNPKMSRYIYCARNGVHIIDLVKTAVCMNNAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 AKSGKRFLFVGTKKQASEVVAQEAARCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEASVLRHELERLQKYLGGLKGMKRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G + Sbjct: 181 IPLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLVLGRIADAINEGRHGSNDQRA 233 >gi|194132099|gb|ACF33353.1| ribosomal protein S2 [Gonystylus bancanus] Length = 236 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + + V TK +A+D V AA R+ + VN KWLGGM+TNW T + + K RD E Sbjct: 67 RGKQFVIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTERRLDKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ R+ +L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGRLNRLPKRDAAMFRRQLSRLQTYLGGIQYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 V ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TVCLIDTNCDPDLADISIPANDDALASIRLILNKLVFAICEGRS 230 >gi|313183811|ref|YP_004021654.1| ribosomal protein S2 [Prunus persica] gi|309321423|gb|ADO64964.1| ribosomal protein S2 [Prunus persica] Length = 236 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRINRLPKRDAAVLKRQLFHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|167746950|ref|ZP_02419077.1| hypothetical protein ANACAC_01662 [Anaerostipes caccae DSM 14662] gi|167653910|gb|EDR98039.1| hypothetical protein ANACAC_01662 [Anaerostipes caccae DSM 14662] Length = 237 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YI+ ERN HIIDL ++V M+ A + + VA GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYNAVKECVAEGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D + A+R + VN +WLGGM+TN+KT+ I +L+ ++++ + Sbjct: 61 KILFVGTKKQAQDSIKTEAERCGMFYVNQRWLGGMLTNFKTIRSRIDRLKKIKKMEEDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE L + ++ DKL++ L GI +M +PD++F+VD +E + +QEA L IP+V Sbjct: 121 FEVLPKKEVLELRKEMDKLQKNLGGIEEMNEIPDMIFIVDPKKENICVQEAHTLGIPLVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DTNS+P+ ++Y+IPGNDD+ R++ L +A A ++ Sbjct: 181 IADTNSDPEDLEYIIPGNDDAIRAVKLITSAMADAVVEA 219 >gi|121720602|ref|YP_001001523.1| ribosomal protein S2 [Nuphar advena] gi|122227256|sp|Q4FG66|RR2_NUPAD RecName: Full=30S ribosomal protein S2, chloroplastic gi|69216173|gb|AAZ03903.1| ribosomal protein S2 [Nuphar advena] gi|84682193|gb|ABC60447.1| ribosomal protein S2 [Nuphar advena] Length = 238 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NISLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL Sbjct: 67 RGKHFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRVRAE 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ + L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 MGQLSRLPKRDAAILKRQLSHFQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA G + Sbjct: 187 TICLIDTNCDPDLADIPIPANDDAIASIRLILNKLVSAICQGRS 230 >gi|257453217|ref|ZP_05618516.1| 30S ribosomal protein S2 [Fusobacterium sp. 3_1_5R] gi|317059751|ref|ZP_07924236.1| SSU ribosomal protein S2P [Fusobacterium sp. 3_1_5R] gi|313685427|gb|EFS22262.1| SSU ribosomal protein S2P [Fusobacterium sp. 3_1_5R] Length = 247 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 104/259 (40%), Positives = 158/259 (61%), Gaps = 14/259 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ ++ A + Sbjct: 1 MAVITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIETAYDEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ I++L++LE + Sbjct: 61 VEDGGKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKGRIERLKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE ++ KL + L GI++M +P +FVVD E+LA+ EA L Sbjct: 121 EAEGILDTAYTKKEAATFRKELAKLSKNLTGIKEMKEVPQAIFVVDVKMEELAVTEADHL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD V + IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDKVTFPIPANDDAIRSVKLITSVMANAIVEGNQ------------G 228 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V + E +Q+EE S Sbjct: 229 KENVEPASEEIQVEEGSAE 247 >gi|325831938|ref|ZP_08165035.1| ribosomal protein S2 [Eggerthella sp. HGA1] gi|325486259|gb|EGC88711.1| ribosomal protein S2 [Eggerthella sp. HGA1] Length = 262 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 97/225 (43%), Positives = 146/225 (64%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +S+ Sbjct: 1 MTKVSITSLLDAGSHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLVGLDQAYTFVSEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA + V +AA + VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 61 AKKGGTVLFVGTKKQAQEAVADAANKCGMPYVNARWLGGMLTNFVTIRSRVNRMEELEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE++ + ++ KL+ L+GIR+M PD +FV+DTNRE +AI E+RRL Sbjct: 121 EADGRMAVLPKKEQILLHKELSKLQTNLNGIRNMKRTPDAVFVIDTNREAIAIHESRRLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V +DTN +PD VD+ IP NDD+ RS+ L D +A A I G+ Sbjct: 181 IPVVGTLDTNCDPDDVDFGIPANDDAIRSVRLLADFIADAVIAGV 225 >gi|18272396|sp|P81289|RS2_BACST RecName: Full=30S ribosomal protein S2; AltName: Full=BS2a Length = 235 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 90/235 (38%), Positives = 156/235 (66%), Gaps = 1/235 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FG + WNPKM++YIF ERN ++ID+ +TV +++A + + Sbjct: 1 MSVISMKQLLEAGVHFGWQTRRWNPKMKKYIFTERNGIYLIDIQKTVKKVEEAYNFVREL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK QA + V E A+R + VN + +GG +TN+ T+ + I++LR++E++ Sbjct: 61 AANGGKILFVGTKRQAQESVKEEAERCGMFYVNQRRIGGTLTNFATLQKRIKRLREIEKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + +++++++L++ + GI+DM LPD +FV+D +E++A+ EAR+L Sbjct: 121 EEDGVFDVLPKKEVIGLKKEKERLEKFIGGIKDMKELPDALFVIDPRKERIAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 IPI+ +VDTN++P YVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 IPIIGIVDTNNDPCEGGYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 235 >gi|257464019|ref|ZP_05628404.1| 30S ribosomal protein S2 [Fusobacterium sp. D12] gi|317061540|ref|ZP_07926025.1| SSU ribosomal protein S2P [Fusobacterium sp. D12] gi|313687216|gb|EFS24051.1| SSU ribosomal protein S2P [Fusobacterium sp. D12] Length = 247 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 104/259 (40%), Positives = 160/259 (61%), Gaps = 14/259 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ ++ A + Sbjct: 1 MAVITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEAAYDEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V GG++LFV TK QA + + E A+R+ Y VNS+WLGGM+TN+ T+ I++L++LE + Sbjct: 61 VEDGGKVLFVGTKKQAQEAIKEQAERAGMYYVNSRWLGGMLTNFSTIKGRIERLKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE + ++ KL + L GI++M +P +FVVD E+LA+ EA L Sbjct: 121 EAEGILDTAYTKKEAASFRKELAKLAKNLTGIKEMKEVPQAIFVVDVKMEELAVTEADHL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PD V + IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDKVTFPIPANDDAIRSVKLITSVMANAIVEGNQ------------G 228 Query: 241 GETVVHSKEGMQLEEDSQS 259 ETV + E +Q+EE S Sbjct: 229 KETVEPASEEIQVEEGSAE 247 >gi|17129596|dbj|BAB72236.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 87/223 (39%), Positives = 129/223 (57%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIRARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRFNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIIIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGR 229 >gi|156573701|gb|ABU85183.1| ribosomal protein S2 [Anethum graveolens] Length = 236 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMKAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 KGKQFLIVGTKNKAADLVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ ++D + E A+QE L IP Sbjct: 127 TGRLHRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQHEEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAIREGRS 230 >gi|145634080|ref|ZP_01789791.1| 30S ribosomal protein S2 [Haemophilus influenzae PittAA] gi|145636956|ref|ZP_01792620.1| 30S ribosomal protein S2 [Haemophilus influenzae PittHH] gi|148826443|ref|YP_001291196.1| 30S ribosomal protein S2 [Haemophilus influenzae PittEE] gi|148828091|ref|YP_001292844.1| 30S ribosomal protein S2 [Haemophilus influenzae PittGG] gi|161350022|ref|NP_439073.2| 30S ribosomal protein S2 [Haemophilus influenzae Rd KW20] gi|161761272|ref|YP_248611.2| 30S ribosomal protein S2 [Haemophilus influenzae 86-028NP] gi|319775155|ref|YP_004137643.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae F3047] gi|319897600|ref|YP_004135797.1| 30S ribosomal subunit protein s2 [Haemophilus influenzae F3031] gi|12230940|sp|P44371|RS2_HAEIN RecName: Full=30S ribosomal protein S2 gi|166225276|sp|A5UDG2|RS2_HAEIE RecName: Full=30S ribosomal protein S2 gi|166225277|sp|A5UI55|RS2_HAEIG RecName: Full=30S ribosomal protein S2 gi|209573721|sp|Q4QLZ6|RS2_HAEI8 RecName: Full=30S ribosomal protein S2 gi|145268524|gb|EDK08517.1| 30S ribosomal protein S2 [Haemophilus influenzae PittAA] gi|145269814|gb|EDK09753.1| 30S ribosomal protein S2 [Haemophilus influenzae PittHH] gi|148716603|gb|ABQ98813.1| 30S ribosomal protein S2 [Haemophilus influenzae PittEE] gi|148719333|gb|ABR00461.1| 30S ribosomal protein S2 [Haemophilus influenzae PittGG] gi|301169631|emb|CBW29232.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae 10810] gi|309973591|gb|ADO96792.1| 30S ribosomal protein S2 [Haemophilus influenzae R2846] gi|317433106|emb|CBY81480.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae F3031] gi|317449746|emb|CBY85953.1| 30S ribosomal subunit protein S2 [Haemophilus influenzae F3047] Length = 240 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 158/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|71907372|ref|YP_284959.1| 30S ribosomal protein S2 [Dechloromonas aromatica RCB] gi|123760541|sp|Q47F92|RS2_DECAR RecName: Full=30S ribosomal protein S2 gi|71846993|gb|AAZ46489.1| SSU ribosomal protein S2P [Dechloromonas aromatica RCB] Length = 248 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 105/249 (42%), Positives = 157/249 (63%), Gaps = 3/249 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ W+PKM YIF RN HI++L +T+ +A+ + + Sbjct: 2 SVTMREMLEAGVHFGHQTRFWSPKMAPYIFGARNKIHIVNLEKTLAKYNEAMAFVKKLAS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G ILFV TK QA + + E A R+ V+ +WLGGM+TN+KTV SI++L+D+E + Sbjct: 62 SRGTILFVGTKRQAREIIGEEALRAGAPFVDQRWLGGMLTNFKTVKTSIKRLKDMEVAVE 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E + KKE L R+ +KL++++ GI++M GLPD +FV+D K+AI EA +L IP Sbjct: 122 AGELEKMPKKEALTFRRELEKLQKSIGGIKEMAGLPDAIFVIDVGYHKIAITEAEKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +PD V YVIPGNDDSSR+I L+ VA A ++G ++ + A + Sbjct: 182 VIGVVDTNHSPDGVAYVIPGNDDSSRAIQLYARGVADAILEGRSQVVQDIVAAGG--DDE 239 Query: 244 VVHSKEGMQ 252 V ++ Q Sbjct: 240 FVEVQDAAQ 248 >gi|88798258|ref|ZP_01113844.1| ribosomal protein S2 [Reinekea sp. MED297] gi|88779034|gb|EAR10223.1| ribosomal protein S2 [Reinekea sp. MED297] Length = 241 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 107/223 (47%), Positives = 152/223 (68%), Gaps = 1/223 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++GV FGH+ WNPKM +YIF RN HII+L TVP L AL + A+ Sbjct: 1 MRDLLKAGVHFGHQTRYWNPKMSQYIFGARNKIHIINLEHTVPALNDALSFVGSLAAKKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKE 126 +ILFV TK AS+ + E A R+ V +WLGGM+TN+KT+ QSI++LR+ + + Sbjct: 61 KILFVGTKRSASNIIREEATRAGMPYVAHRWLGGMLTNYKTIRQSIKRLRELQTQQDDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKERL R+ KL++++ GI+DMGGLPD +FV+D + E++AIQEA +L IP++ Sbjct: 121 FEQLTKKERLMNTREIAKLEKSIGGIKDMGGLPDALFVIDVDHERIAIQEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 VVDTNSNPD +DYVIPGNDD+ R+I ++ +A A ++ + Sbjct: 181 VVDTNSNPDGIDYVIPGNDDAIRAIEIYAQAMADAVLEAKTAE 223 >gi|257094444|ref|YP_003168085.1| 30S ribosomal protein S2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046968|gb|ACV36156.1| ribosomal protein S2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 247 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 110/245 (44%), Positives = 159/245 (64%), Gaps = 2/245 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+RQ+LE+GV FGH+ WNPKM YIF RN HI++L QT+ +A+ + A Sbjct: 4 TMRQMLEAGVHFGHQTRFWNPKMAPYIFGARNKIHIVNLEQTLAKYNEAMTFVRRLSANK 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV+TK QA + + E A R A V +WLGGM+TN+KT+ QSI++++D+E + + Sbjct: 64 GSILFVSTKRQAREIMAEEATRCASPYVEQRWLGGMLTNFKTIKQSIKRIKDMEAMSDDG 123 Query: 127 N-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KKE L + R+ DK+++++ GI+DM LPD +FV+D K+AI EA +L IP+V Sbjct: 124 SLARLGKKEALMMTRELDKMQKSIGGIKDMVSLPDALFVIDVGYHKIAITEANKLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 AVVDTN +P VDYVIPGNDDSSR+I L+ VA A ++G ++ + D S E + Sbjct: 184 AVVDTNHSPKGVDYVIPGNDDSSRAIRLYARGVADAVLEGRSQFVEEI-LDAVSGDEFIE 242 Query: 246 HSKEG 250 + + Sbjct: 243 EAADD 247 >gi|114107122|ref|YP_740106.1| ribosomal protein S2 [Daucus carota] gi|122227489|sp|Q0G9X3|RR2_DAUCA RecName: Full=30S ribosomal protein S2, chloroplastic gi|113200897|gb|ABI32413.1| ribosomal protein S2 [Daucus carota] Length = 236 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 131/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMKAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ ++D + E A+QE L IP Sbjct: 127 TGRLRRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQHEEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TISLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAIREGRS 230 >gi|331005979|ref|ZP_08329324.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC1989] gi|330420224|gb|EGG94545.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC1989] Length = 251 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 109/248 (43%), Positives = 153/248 (61%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM++YIF RNN HII+L TVP +AL +I Sbjct: 1 MSTVSMRDMLQAGVHFGHQTRYWNPKMDQYIFGARNNIHIINLEHTVPAFNEALDMIKKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ +IL V TK A + E A+R+ Q V+ +WLGGM+TN+KT+ SI++ R+ E Sbjct: 61 GSQKKKILMVGTKRAAQKTIKEQAERAGQPFVSHRWLGGMLTNYKTIRTSIRRFREFETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R +KL+ ++ GI+DMGGLPD +FVVD E++AI EA +L Sbjct: 121 SQDGTFDKLTKKEALMRTRAMEKLELSIGGIKDMGGLPDALFVVDVEHERIAINEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNSNP VDYVIPGNDD+ R+I L+ VA A +DG+A D Sbjct: 181 IPVFGIVDTNSNPAGVDYVIPGNDDAIRAIKLYVTAVADACVDGLASSQEVPNKDEFVEV 240 Query: 242 ETVVHSKE 249 + E Sbjct: 241 DAPAAEAE 248 >gi|296272319|ref|YP_003654950.1| 30S ribosomal protein S2 [Arcobacter nitrofigilis DSM 7299] gi|296096493|gb|ADG92443.1| ribosomal protein S2 [Arcobacter nitrofigilis DSM 7299] Length = 266 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 109/237 (45%), Positives = 151/237 (63%), Gaps = 1/237 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + +I D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRYTYTLIRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ++FV TK QAS V +AA VN +WLGGM+TN+ T+ +SI+KL ++++ + Sbjct: 62 GQTMMFVGTKKQASQAVKDAAISCGMPYVNHRWLGGMLTNYGTIKKSIRKLEIIKKMREE 121 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 TKKE L + RK +KL+ L GI+DM LPD+MFV+D +EK+AI EARRL I + Sbjct: 122 GQLDLLTKKEALMLSRKEEKLELYLGGIKDMTKLPDMMFVLDAVKEKIAIAEARRLGITV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 VA +DTN +PD+VD+ IPGNDD+ RSI LFC +A+A +G A G + Sbjct: 182 VAPLDTNCDPDVVDWPIPGNDDAIRSIQLFCTEMAAAMNEGKAAYAEANGEVVEETE 238 >gi|150251448|ref|YP_001312181.1| ribosomal protein S2 [Cycas taitungensis] gi|209573600|sp|A6H5F6|RR2_CYCTA RecName: Full=30S ribosomal protein S2, chloroplastic gi|149941498|dbj|BAF64922.1| ribosomal protein S2 [Cycas taitungensis] gi|156597987|gb|ABU85260.1| ribosomal protein S2 [Cycas micronesica] Length = 240 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 129/222 (58%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH+ WNP+M YIF ER HII+L++T L +A ++ D Sbjct: 7 NINLEEMMEAGVHFGHQARKWNPRMAPYIFTERRGIHIINLTRTARFLSEACDLVFDAAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + V TK QA+D V AA ++ + VN KWLGGM+TNW T +K +DL++ + Sbjct: 67 KGKQFPIVGTKYQAADSVASAAIKARCHYVNKKWLGGMLTNWSTTGTRPRKFKDLKKEQD 126 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ +L++ L GI+ M LPD++ + D E AI E L IP Sbjct: 127 TGQSNRLPKKEAAMLKRQLAQLQKYLGGIKYMTSLPDIVIIADQQEESTAIGECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + +VDT+ +PDL D IP NDD+ SI L + + S+ +G Sbjct: 187 TICLVDTDCDPDLTDIPIPANDDARASIRLILNKLTSSICEG 228 >gi|145628158|ref|ZP_01783959.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.1-21] gi|144979933|gb|EDJ89592.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.1-21] Length = 240 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 159/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFEKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 181 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|307683495|dbj|BAJ19726.1| ribosomal protein S2 [Pseudotsuga sinensis var. wilsoniana] Length = 234 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 91/226 (40%), Positives = 131/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSLSEACDLAFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ + Sbjct: 67 RGKQFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNRPPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + SA +G + + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEGRSLR 232 >gi|290487150|gb|ADD29959.1| ribosomal protein S2 [Nerium oleander] Length = 236 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMGPYISARRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLSGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|161347557|ref|YP_291352.2| 30S ribosomal protein S2 [Prochlorococcus marinus str. NATL2A] gi|209573695|sp|A2C1I7|RS2_PROM1 RecName: Full=30S ribosomal protein S2 gi|209573696|sp|Q46LH9|RS2_PROMT RecName: Full=30S ribosomal protein S2 Length = 230 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 91/225 (40%), Positives = 135/225 (60%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++E+G FGH+ WNPKM RYI+ RN HIIDL +T + A + Sbjct: 1 MAVVSLSEMMEAGAHFGHQTRRWNPKMSRYIYSARNGVHIIDLVKTAVCMNSAYKWTRGA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + Sbjct: 61 ARSGKRFLFVGTKKQASEVVAQEAIRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEGAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V+++DTN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 181 IPLVSMLDTNCDPDLCEIPIPCNDDAVRSVQLVLGRLADAINEGR 225 >gi|257454315|ref|ZP_05619579.1| ribosomal protein S2 [Enhydrobacter aerosaccus SK60] gi|257448286|gb|EEV23265.1| ribosomal protein S2 [Enhydrobacter aerosaccus SK60] Length = 256 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 153/234 (65%), Gaps = 1/234 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q ++R LLE+G FGH+ WNPKM ++IF RN HII+L TV + +AL ++ A Sbjct: 8 QVSMRDLLEAGAHFGHQTRFWNPKMGKFIFGARNKIHIINLEHTVKAMNEALNFVNREAA 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-L 123 RG ++LFV TK AS+ + E A R+ V+ +WLGGM+TNWKT+ QSI +L++ E+ Sbjct: 68 RGNKVLFVGTKRAASNVISEQAARAGMPYVDHRWLGGMLTNWKTIRQSITRLKEYEKQAE 127 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TK+E L R+ +KL+RAL GI++M GLPD +FVVD + E +AI+EA+ L IP Sbjct: 128 DGTFAKLTKREALERTREMEKLERALGGIKNMNGLPDAIFVVDVDHEAIAIKEAKNLGIP 187 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 ++ +VDTNSNPD VDYVIP NDD+ R++ L+ VA A I G + G Sbjct: 188 VIGIVDTNSNPDDVDYVIPANDDAIRAVTLYVSAVADAIIAGKEYAKTQGGKAA 241 >gi|114107035|ref|YP_740191.1| ribosomal protein S2 [Liriodendron tulipifera] gi|122233822|sp|Q0G9N0|RR2_LIRTU RecName: Full=30S ribosomal protein S2, chloroplastic gi|113200983|gb|ABI32498.1| ribosomal protein S2 [Liriodendron tulipifera] Length = 236 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 86/226 (38%), Positives = 129/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKNFLLVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGKLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECLTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRSSS 232 >gi|33861310|ref|NP_892871.1| 30S ribosomal protein S2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|61215697|sp|Q7V1V0|RS2_PROMP RecName: Full=30S ribosomal protein S2 gi|33633887|emb|CAE19212.1| 30S ribosomal protein S2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 234 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 91/231 (39%), Positives = 138/231 (59%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + Sbjct: 1 MAVVSLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + Sbjct: 61 AKSGKRFLFVGTKKQASDVVAQEAVRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGAIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRESNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 I +V+++DTN +PDL + IP NDD+ RS+ L +A A +G + Sbjct: 181 ISLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRKGSNDQ 231 >gi|291456897|ref|ZP_06596287.1| ribosomal protein S2 [Bifidobacterium breve DSM 20213] gi|291382174|gb|EFE89692.1| ribosomal protein S2 [Bifidobacterium breve DSM 20213] Length = 292 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 105/250 (42%), Positives = 158/250 (63%), Gaps = 2/250 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I Sbjct: 13 TMAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKT 72 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 73 TVAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEE 132 Query: 122 LL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA + Sbjct: 133 MDFSDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKESLAVEEAHK 192 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + Sbjct: 193 LGIPVVALVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGQAAKAEGE 252 Query: 240 AGETVVHSKE 249 E + + E Sbjct: 253 TAEQPMAAWE 262 >gi|313681364|ref|YP_004059102.1| SSU ribosomal protein s2p [Sulfuricurvum kujiense DSM 16994] gi|313154224|gb|ADR32902.1| SSU ribosomal protein S2P [Sulfuricurvum kujiense DSM 16994] Length = 258 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM++YIF R N +IIDL +T+ + A Q + D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNAYQQVVDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G +LFV TK QA + +AA V+++WLGGM+TN+ T+ +SI+KL +EE+ N Sbjct: 62 GKTVLFVGTKKQARVAIRDAAVACGMPYVDNRWLGGMLTNFPTIQKSIRKLDIIEEMQAN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + R+++KL L GIR M LPD+MFV+D +E +A+QEAR L I + Sbjct: 122 GQINLLTKKEALMMNRQKEKLIAYLGGIRHMKTLPDMMFVIDAVKEHIAVQEARNLGIQV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA +DTN +PD++D IPGNDD+ RSI LFC +A A +G A ++ Sbjct: 182 VAPLDTNCDPDVIDIPIPGNDDAIRSIQLFCKEMAEAINEGKALRNG 228 >gi|209573709|sp|A6SZQ1|RS2_JANMA RecName: Full=30S ribosomal protein S2 Length = 248 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 106/246 (43%), Positives = 162/246 (65%), Gaps = 2/246 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M Q+A++ I + Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLSS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-LL 123 G +LFV TK QA + + A+R+ V+ +WLGGM+TN+KT+ SI++L+++E + Sbjct: 62 NRGTVLFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASIE 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + Q +KKE L ER++ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP Sbjct: 122 DGSVQKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ V YVIPGNDDSS++I L+ VA A ++G A + + ++ G+ Sbjct: 182 VIGVVDTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRANATNDL-VESIKGGDD 240 Query: 244 VVHSKE 249 V E Sbjct: 241 FVEVSE 246 >gi|283783273|ref|YP_003374027.1| ribosomal protein S2 [Gardnerella vaginalis 409-05] gi|283442137|gb|ADB14603.1| ribosomal protein S2 [Gardnerella vaginalis 409-05] Length = 272 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 106/272 (38%), Positives = 166/272 (61%), Gaps = 2/272 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKQT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V +WLGGM+TN++TVS +++L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVCERWLGGMLTNFQTVSTRVKRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ + Sbjct: 181 GIPVVAIVDTNTDPESVEYPIPANDDAIRGIELLTSLMADAVAEGLLEHAGKGAKSEGND 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 + + ++ + +E ++ + + E Sbjct: 241 AQPMAAWEKELLTKEGEAEAKPAKEENTEANA 272 >gi|290487172|gb|ADD29970.1| ribosomal protein S2 [Liquidambar styraciflua] Length = 236 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++ +D V AA ++ + VN KWLGGM TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKVADSVARAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGGLNHFPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|149390257|ref|YP_001294087.1| ribosomal protein S2 [Chloranthus spicatus] gi|209573595|sp|A6MMB1|RR2_CHLSC RecName: Full=30S ribosomal protein S2, chloroplastic gi|146744177|gb|ABQ43249.1| ribosomal protein S2 [Chloranthus spicatus] Length = 236 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G L V TK++A+D V AA R+ + VN KWLGGM TNW T +QK RDL E Sbjct: 67 SGKHFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|323143560|ref|ZP_08078237.1| ribosomal protein S2 [Succinatimonas hippei YIT 12066] gi|322416623|gb|EFY07280.1| ribosomal protein S2 [Succinatimonas hippei YIT 12066] Length = 254 Score = 301 bits (770), Expect = 9e-80, Method: Composition-based stats. Identities = 109/222 (49%), Positives = 146/222 (65%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ YIF RN HII+L +TV + AL +S VA G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKSYIFGHRNGVHIINLEKTVQCYEDALNFLSSVVAHKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK A D + AA Q+ V+ +WLGGM+TNWKTV QSI++L++LE + Sbjct: 61 KVLFVGTKRAACDQIGPAATSCGQFYVDHRWLGGMLTNWKTVRQSIKRLKELEIQSTDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ KL R+L GI+DMGGLPD +FV+D E +AI+EA L IP+VA Sbjct: 121 FDKLTKKEALLRTRELAKLNRSLGGIKDMGGLPDALFVIDAEVEHIAIKEANNLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 VVDTNS+PD V+YVIPGNDD+ R++ L+ A+ Sbjct: 181 VVDTNSDPDGVNYVIPGNDDAIRAVELYLKGAVEVINAARAQ 222 >gi|19704941|ref|NP_602436.1| 30S ribosomal protein S2 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296329196|ref|ZP_06871697.1| 30S ribosomal protein S2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|25009203|sp|Q8RIH7|RS2_FUSNN RecName: Full=30S ribosomal protein S2 gi|19712843|gb|AAL93735.1| SSU ribosomal protein S2P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153552|gb|EFG94369.1| 30S ribosomal protein S2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 247 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 103/259 (39%), Positives = 161/259 (62%), Gaps = 14/259 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+RS Y VNS+WLGGM+TN+ T+ + I+++++LE+L Sbjct: 61 AEDGGKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKKRIERMKELEKL 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 121 DAEGILDTDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVIANAIVEGNQ------------G 228 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V E + +EE S Sbjct: 229 IENVEPQSEEVNVEEGSAE 247 >gi|320103136|ref|YP_004178727.1| 30S ribosomal protein S2P [Isosphaera pallida ATCC 43644] gi|319750418|gb|ADV62178.1| SSU ribosomal protein S2P [Isosphaera pallida ATCC 43644] Length = 307 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 108/278 (38%), Positives = 159/278 (57%), Gaps = 6/278 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ L+E+GV FG R WNPKM+ YI+ +RN HIIDL +TV L +A + Sbjct: 1 MSTLAVKDLVEAGVHFGSRARRWNPKMKPYIYTKRNLIHIIDLKETVRGLLRASKYFHRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ G ILFV TK QA+D ++E R V +WLGG +TN++T+ +++L +LE + Sbjct: 61 AAQNGLILFVGTKRQAADILVEECTRCGMPYVTERWLGGTLTNFRTIRSRLERLEELEAI 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L+ E ++KK + R+R K++R L GIR M LP+ +FVVD NRE A+ EAR+L Sbjct: 121 LDGEQAATYSKKMISTLTRERRKIERNLSGIRHMTRLPEALFVVDPNREHNAVVEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 I +VA++DT+ +PDL+D IPGNDDS RSI L + + ++G R + D S G Sbjct: 181 IKVVALLDTDCDPDLIDLPIPGNDDSMRSIELIVRRLTDSILEG--RLSAPAEPDPASRG 238 Query: 242 ETVVHSKEGMQLEEDSQSSES---SVLDGQEVAVVPEL 276 E + G + E + E + VA E Sbjct: 239 ERAPRGERGPRGERRAPRGERGAPPPSATEPVAPTAET 276 >gi|237743354|ref|ZP_04573835.1| SSU ribosomal protein S2P [Fusobacterium sp. 7_1] gi|256028472|ref|ZP_05442306.1| 30S ribosomal protein S2 [Fusobacterium sp. D11] gi|260495026|ref|ZP_05815155.1| ribosomal protein S2 [Fusobacterium sp. 3_1_33] gi|289766393|ref|ZP_06525771.1| SSU ribosomal protein S2P [Fusobacterium sp. D11] gi|229433133|gb|EEO43345.1| SSU ribosomal protein S2P [Fusobacterium sp. 7_1] gi|260197469|gb|EEW94987.1| ribosomal protein S2 [Fusobacterium sp. 3_1_33] gi|289717948|gb|EFD81960.1| SSU ribosomal protein S2P [Fusobacterium sp. D11] Length = 247 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 103/259 (39%), Positives = 160/259 (61%), Gaps = 14/259 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM++YIF ERN H+IDL +++ ++ A + + Sbjct: 1 MSVVTMKQLLEAGVHFGHQAKRWNPKMKKYIFTERNGIHVIDLHKSLKKIEDAYEEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK QA + + E A+R+ Y VNS+WLGGM+TN+ T+ + I+++++LE + Sbjct: 61 AEDGGKILFVGTKKQAQEAIKEQAERAGMYYVNSRWLGGMLTNFSTIKKRIERMKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 121 DAEGILDTDYTKKEAAAFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSIMANAIVEGNQ------------G 228 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V E + +EE S Sbjct: 229 IENVEPQSEEVNVEEGSAE 247 >gi|32034392|ref|ZP_00134582.1| COG0052: Ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|165975980|ref|YP_001651573.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149879|ref|YP_001968404.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251567|ref|ZP_07337741.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252197|ref|ZP_07338365.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249774|ref|ZP_07531752.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252120|ref|ZP_07534019.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256588|ref|ZP_07538369.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307263203|ref|ZP_07544823.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238687535|sp|B0BUC4|RS2_ACTPJ RecName: Full=30S ribosomal protein S2 gi|238692330|sp|B3GXB0|RS2_ACTP7 RecName: Full=30S ribosomal protein S2 gi|165876081|gb|ABY69129.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915010|gb|ACE61262.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648980|gb|EFL79168.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649565|gb|EFL79747.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858189|gb|EFM90267.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860420|gb|EFM92434.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864998|gb|EFM96900.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306871420|gb|EFN03144.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 238 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 109/241 (45%), Positives = 162/241 (67%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D A+A +G + S + A+ ++ Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEG---RGSNVEAELEATA 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|153954042|ref|YP_001394807.1| 30S ribosomal protein S2 [Clostridium kluyveri DSM 555] gi|219854655|ref|YP_002471777.1| hypothetical protein CKR_1312 [Clostridium kluyveri NBRC 12016] gi|189044932|sp|A5N828|RS2_CLOK5 RecName: Full=30S ribosomal protein S2 gi|254764470|sp|B9E1I8|RS2_CLOK1 RecName: Full=30S ribosomal protein S2 gi|146346923|gb|EDK33459.1| RpsB [Clostridium kluyveri DSM 555] gi|219568379|dbj|BAH06363.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 234 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 100/230 (43%), Positives = 144/230 (62%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLESGV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSIISMKQLLESGVHFGHQTRRWNPKMASYIFTERNGIYIIDLQKTVRKIEEAYEFVKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI-QKLRDLEE 121 + G ILF+ TK QA + + E AKRS + VN++WLGGM+TN+ T+ I + + Sbjct: 61 ASEGKDILFIGTKKQAQEAIKEEAKRSNMHYVNNRWLGGMLTNFLTIRNRIGKLEELEKM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMG-GLPDLMFVVDTNREKLAIQEARRL 180 + + +KKE + + ++ KL+R L GI+ M +FVVD +EK AI EA+ L Sbjct: 121 EEDGTFEVLSKKEVIKLRNEKQKLERNLGGIKAMNAENVGALFVVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L VA A I+G + Sbjct: 181 GIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITSKVADAVIEGRQGEQ 230 >gi|7525022|ref|NP_051048.1| ribosomal protein S2 [Arabidopsis thaliana] gi|139389407|ref|YP_001123104.1| ribosomal protein S2 [Olimarabidopsis pumila] gi|6685912|sp|P56797|RR2_ARATH RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573618|sp|A4QJS2|RR2_OLIPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|5881683|dbj|BAA84374.1| ribosomal protein S2 [Arabidopsis thaliana] gi|134286301|dbj|BAF49928.1| ribosomal protein S2 [Olimarabidopsis pumila] Length = 236 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|39573652|dbj|BAD04077.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRFNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D +IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADILIPANDDAISSIRLILNKLVFAICEGR 229 >gi|134094560|ref|YP_001099635.1| 30S ribosomal protein S2 [Herminiimonas arsenicoxydans] gi|166225279|sp|A4G4S1|RS2_HERAR RecName: Full=30S ribosomal protein S2 gi|133738463|emb|CAL61508.1| 30S ribosomal subunit protein S2 [Herminiimonas arsenicoxydans] Length = 248 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 107/246 (43%), Positives = 162/246 (65%), Gaps = 2/246 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM YIF RN HI++L +T+ M Q+A++ I + Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIVNLEKTLGMYQEAMKYIKQLSS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G +LFV TK QA + + A R+ V+ +WLGGM+TN+KT+ SI++L++LE L+ Sbjct: 62 NRGTVLFVGTKRQARETIAAEAARAGMPYVDQRWLGGMLTNFKTIKTSIKRLKELEALVE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L ER++ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP Sbjct: 122 DGSMEKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ V Y+IPGNDDSS++I L+ VA A ++G A + + ++ G+ Sbjct: 182 VIGVVDTNHSPEGVAYIIPGNDDSSKAIMLYARGVADAILEGRASATNDL-VESIKGGDD 240 Query: 244 VVHSKE 249 V E Sbjct: 241 FVEVNE 246 >gi|309322407|ref|YP_003934487.1| ribosomal protein S2 [Cathaya argyrophylla] gi|307683333|dbj|BAJ19640.1| ribosomal protein S2 [Cathaya argyrophylla] Length = 234 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 88/226 (38%), Positives = 130/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L ++ + D Sbjct: 7 SIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSESCDLAFDLAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +D ++ + Sbjct: 67 RGKQFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDFKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L + L GIR M LPD+ + + E +A++E R L IP Sbjct: 127 TGRFNRLPKKEAAMLKRQLDQLHKYLGGIRYMTSLPDIAIITNQQEESIALRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI + + SA +G + + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIRFILNRLTSAICEGRSLR 232 >gi|325067050|ref|ZP_08125723.1| ribosomal protein S2 [Actinomyces oris K20] Length = 240 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 154/240 (64%), Gaps = 2/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLL+SGV FGH+ WNPKM+R+I ERN +IIDL Q++ + A + + Sbjct: 1 MAVVTMRQLLDSGVHFGHQTRRWNPKMKRFILTERNGIYIIDLQQSIEGINTAYDFVKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 VARGG ILFV TK QA V E A+R VN +WLGGM+TN+ TV + ++++LE+ Sbjct: 61 VARGGNILFVGTKKQAQAAVAEQAQRVGMPYVNQRWLGGMLTNFSTVRARLDRMKELEQI 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L + R++DKL+R L GIRDM LP ++VVDT +E LAI EA++L Sbjct: 121 DFDDVAGSGRTKKELLMMRREKDKLQRTLGGIRDMSKLPAAVWVVDTKKEHLAISEAQKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++DTN +PD Y IPGNDD+ R++ L +VA A +G+ + + A Sbjct: 181 GIPVIAILDTNCDPDEATYGIPGNDDAIRAVTLLTRVVADATAEGLLARSGGRARTGEEA 240 >gi|91983981|ref|YP_567065.1| ribosomal protein S2 [Vitis vinifera] gi|122242807|sp|Q0ZJ31|RR2_VITVI RecName: Full=30S ribosomal protein S2, chloroplastic gi|91701639|gb|ABE47523.1| ribosomal protein S2 [Vitis vinifera] Length = 236 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|306486201|gb|ADM92742.1| ribosomal protein S2 [Franklinia alatamaha] Length = 235 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLGDISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|317488432|ref|ZP_07946985.1| ribosomal protein S2 [Eggerthella sp. 1_3_56FAA] gi|316912476|gb|EFV34032.1| ribosomal protein S2 [Eggerthella sp. 1_3_56FAA] Length = 266 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 97/225 (43%), Positives = 146/225 (64%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +S+ Sbjct: 5 MTKVSITSLLDAGSHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLVGLDQAYTFVSEL 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA + V +AA + VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 65 AKKGGTVLFVGTKKQAQEAVADAANKCGMPYVNARWLGGMLTNFVTIRSRVNRMEELEAM 124 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE++ + ++ KL+ L+GIR+M PD +FV+DTNRE +AI E+RRL Sbjct: 125 EADGRMAVLPKKEQILLHKELSKLQTNLNGIRNMKRTPDAVFVIDTNREAIAIHESRRLD 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V +DTN +PD VD+ IP NDD+ RS+ L D +A A I G+ Sbjct: 185 IPVVGTLDTNCDPDDVDFGIPANDDAIRSVRLLADFIADAVIAGV 229 >gi|332298053|ref|YP_004439975.1| ribosomal protein S2 [Treponema brennaborense DSM 12168] gi|332181156|gb|AEE16844.1| ribosomal protein S2 [Treponema brennaborense DSM 12168] Length = 288 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 109/271 (40%), Positives = 180/271 (66%), Gaps = 15/271 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLESGV FGH+ W+P+M++YIF ERN HIIDL +T+ +++A + + Sbjct: 1 MAVVTMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIVSIKEAYEAVRKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +LFV TK QA + + A+R Y VN++WLGGM+TN+ T+ +S+ +L+ LE++ Sbjct: 61 TVAGKSVLFVGTKKQAQQAIAKEAERCGMYYVNNRWLGGMLTNFSTIKKSLLRLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + TKKE +I++++ KL++ L GI++M LP ++F++DT++E++A+ EARR+ Sbjct: 121 EIDGTFENLTKKEIASIQKEKSKLEKNLGGIKEMKDLPGIIFIIDTHKEQIAVAEARRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAVVDTN NP+ +DY IPGNDD+ R+I+LF ++A+A ID + Sbjct: 181 IPIVAVVDTNCNPEGIDYPIPGNDDAIRAISLFTQVIANAVID--------------ADN 226 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 ET + E +Q +ED +++++V +E + Sbjct: 227 ETGLKIIENLQDDEDEVTTDAAVKSEEEEII 257 >gi|309791086|ref|ZP_07685621.1| ribosomal protein S2 [Oscillochloris trichoides DG6] gi|308226870|gb|EFO80563.1| ribosomal protein S2 [Oscillochloris trichoides DG6] Length = 239 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 146/227 (64%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I+ LLE+G FGH+ WNPKM YIF RN HIIDL +TV + A + ++D AR Sbjct: 9 VSIKALLEAGAHFGHQTNRWNPKMRPYIFTARNGIHIIDLQKTVAGVTAAYRFVADLTAR 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G +ILFV TK QA + + E A R+ QY + +WLGG +TN+ T+ +++L DLE + Sbjct: 69 GEKILFVGTKKQAQEAIAEEASRAGQYYITQRWLGGTLTNFTTIRARLKRLSDLEAQRDR 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TK E L +E + KL R GI+ M LP +FV+D ++E LA+QEA ++ +P+ Sbjct: 129 GDFARLTKAEGLKLEEEIGKLNRVFGGIKTMDRLPGALFVIDPHKESLAVQEATKVGVPV 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VA+VDTN +PDL+DYVIP NDD+ R I L +A AA +G+ R+ S Sbjct: 189 VAMVDTNCDPDLIDYVIPCNDDAIRGIRLMTSKMADAAQEGMDRRQS 235 >gi|68164792|ref|YP_247588.1| ribosomal protein S2 [Cucumis sativus] gi|75317328|sp|Q4VZP4|RR2_CUCSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|67511387|emb|CAJ00747.1| ribosomal protein S2 [Cucumis sativus] gi|74027090|gb|AAZ94640.1| ribosomal protein S2 [Cucumis sativus] gi|115432793|gb|ABI97406.1| ribosomal protein S2 [Cucumis sativus] gi|115498292|gb|ABI98734.1| ribosomal protein S2 [Cucumis sativus] Length = 236 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 86/226 (38%), Positives = 126/226 (55%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D Sbjct: 7 NIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAT 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAATRTRCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ +R+ L+ L GI+ M GLPD++ +VD E A+QE L IP Sbjct: 127 TGGLNRLPKRDAAMFKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYRALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAISEGRSSS 232 >gi|189162260|ref|YP_001936506.1| ribosomal protein S2 [Fagopyrum esculentum subsp. ancestrale] gi|166065346|gb|ABY79721.1| ribosomal protein S2 [Fagopyrum esculentum subsp. ancestrale] Length = 239 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMQAGVHFGHGTRKWNPRMSPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL Sbjct: 67 KGKQFLIVGTKTKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGRLACLPKRDAAMLKRQLSRLQTYLGGIKYMTGLPDVVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILTKLVFAICEGRS 230 >gi|256846524|ref|ZP_05551981.1| ribosomal protein S2 [Fusobacterium sp. 3_1_36A2] gi|294784113|ref|ZP_06749414.1| ribosomal protein S2 [Fusobacterium sp. 3_1_27] gi|256718293|gb|EEU31849.1| ribosomal protein S2 [Fusobacterium sp. 3_1_36A2] gi|294488183|gb|EFG35528.1| ribosomal protein S2 [Fusobacterium sp. 3_1_27] Length = 247 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 160/259 (61%), Gaps = 14/259 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+RS Y VN++WLGGM+TN+ T+ + I+++++LE + Sbjct: 61 AEDGGKVLFVGTKKQAQEAIKEQAERSGMYYVNNRWLGGMLTNFSTIKKRIERMKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 121 DAEGILDTDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVMANAIVEGNQ------------G 228 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V E + +EE S Sbjct: 229 IENVEPQSEEVNVEEGSAE 247 >gi|139389939|ref|YP_001123539.1| ribosomal protein S2 [Draba nemorosa] gi|209573602|sp|A4QL08|RR2_DRANE RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286741|dbj|BAF50363.1| ribosomal protein S2 [Draba nemorosa] Length = 236 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|17129594|dbj|BAB72235.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 85/223 (38%), Positives = 128/223 (57%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NIDLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRFNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGR 229 >gi|90415793|ref|ZP_01223726.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2207] gi|90332167|gb|EAS47364.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2207] Length = 265 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 109/230 (47%), Positives = 156/230 (67%), Gaps = 1/230 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM ++IF RN H+I+L QTVP +AL+V+ A+G Sbjct: 1 MRDMLQAGVHFGHQTRFWNPKMSKFIFGSRNKVHVINLEQTVPAFNEALEVLRKEAAKGN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFV TK A + E A+R V+ +WLGGM+TN+KT+ SI++ RDLE + N Sbjct: 61 QILFVGTKRAAQKILKEEAERCGMPYVSHRWLGGMLTNYKTIRASIRRFRDLETQEANGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R ++KL+ ++ GI+DM GLPD++FV+D + E++AI EA +L IP+V Sbjct: 121 FERLTKKEVLMRTRMKEKLENSIGGIKDMNGLPDILFVIDVDHERIAINEANKLGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +VDTNSNPD VDYVIPGNDDS R+I L+ +A+ ++G A+ D Sbjct: 181 IVDTNSNPDGVDYVIPGNDDSIRAIKLYAASIANTVLEGKAQSAKVSSKD 230 >gi|290487180|gb|ADD29974.1| ribosomal protein S2 [Staphylea colchica] Length = 236 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NIGLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V T+++A+ V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTQNKAAGSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLSRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|253682385|ref|ZP_04863182.1| ribosomal protein S2 [Clostridium botulinum D str. 1873] gi|253562097|gb|EES91549.1| ribosomal protein S2 [Clostridium botulinum D str. 1873] Length = 233 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 96/230 (41%), Positives = 146/230 (63%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSIISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI-QKLRDLEE 121 VA G +LFV TK QA + + E + RS + VN++WLGGM+TN+KT+ I + + Sbjct: 61 VAEGKEVLFVGTKKQAQEAIEEESLRSGMHFVNNRWLGGMLTNFKTIRTRINKLEELEKM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP-DLMFVVDTNREKLAIQEARRL 180 + + KKE + + +++KL++ L GI+++ MF+VD +EK AI EA+ L Sbjct: 121 EEDGTFEVLPKKEVIKLRNEKEKLEKNLGGIKNLDASKLGAMFIVDPRKEKNAIAEAKNL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD +DYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 GIPVVAIVDTNCDPDEIDYVIPGNDDAIRAVRLITSKIADAIIEGNQGEQ 230 >gi|228017373|gb|ACP52190.1| ribosomal protein S2 [Larix occidentalis] gi|307683589|dbj|BAJ19773.1| ribosomal protein S2 [Larix decidua] Length = 234 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 91/226 (40%), Positives = 131/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D Sbjct: 7 NIYLEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSLSEACDLAFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ + Sbjct: 67 RGKQFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNRPPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + SA +G + + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEGRSLR 232 >gi|257790857|ref|YP_003181463.1| 30S ribosomal protein S2 [Eggerthella lenta DSM 2243] gi|257474754|gb|ACV55074.1| ribosomal protein S2 [Eggerthella lenta DSM 2243] Length = 278 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 97/225 (43%), Positives = 146/225 (64%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L +A +S+ Sbjct: 5 MTKVSITSLLDAGSHFGHQTRRWNPKMKPYIFGSRGDIYIIDLKQTLVGLDQAYTFVSEL 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG +LFV TK QA + V +AA + VN++WLGGM+TN+ T+ + ++ +LE + Sbjct: 65 AKKGGTVLFVGTKKQAQEAVADAANKCGMPYVNARWLGGMLTNFVTIRSRVNRMEELEAM 124 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE++ + ++ KL+ L+GIR+M PD +FV+DTNRE +AI E+RRL Sbjct: 125 EADGRMAVLPKKEQILLHKELSKLQTNLNGIRNMKRTPDAVFVIDTNREAIAIHESRRLD 184 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+V +DTN +PD VD+ IP NDD+ RS+ L D +A A I G+ Sbjct: 185 IPVVGTLDTNCDPDDVDFGIPANDDAIRSVRLLADFIADAVIAGV 229 >gi|167391794|ref|YP_001671672.1| ribosomal protein S2 [Carica papaya] gi|209573640|sp|B1A924|RR2_CARPA RecName: Full=30S ribosomal protein S2, chloroplastic gi|166344121|gb|ABY86771.1| ribosomal protein S2 [Carica papaya] Length = 236 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 83/222 (37%), Positives = 127/222 (57%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TGRLNRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TISLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEG 228 >gi|139389085|ref|YP_001123803.1| ribosomal protein S2 [Nasturtium officinale] gi|139389631|ref|YP_001123188.1| ribosomal protein S2 [Arabis hirsuta] gi|139389790|ref|YP_001123451.1| ribosomal protein S2 [Crucihimalaya wallichii] gi|209573596|sp|A4QKS0|RR2_CRUWA RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573613|sp|A4QLS2|RR2_NASOF RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573636|sp|A4QK07|RR2_ARAHI RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286386|dbj|BAF50012.1| ribosomal protein S2 [Arabis hirsuta] gi|134286652|dbj|BAF50275.1| ribosomal protein S2 [Crucihimalaya wallichii] gi|134287008|dbj|BAF50627.1| ribosomal protein S2 [Nasturtium officinale] gi|262400802|gb|ACY66291.1| ribosomal protein S2 [Brassica napus] Length = 236 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGFNRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|11466682|ref|NP_039278.1| ribosomal protein S2 [Marchantia polymorpha] gi|133911|sp|P06354|RR2_MARPO RecName: Full=30S ribosomal protein S2, chloroplastic gi|11651|emb|CAA28064.1| rps2 [Marchantia polymorpha] Length = 235 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 88/223 (39%), Positives = 135/223 (60%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH+ WNPKM YIF ER HII+L+QT L +A ++++ + Sbjct: 7 NIHLEEMMEAGVHFGHQARKWNPKMAPYIFTERKGIHIINLTQTARFLSEACDLVANASS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G + L V TK QA+D + +A ++ + VN KWLGGM+TNW T+ +QK +DLE + Sbjct: 67 KGKQFLIVGTKYQAADLIESSALKARCHYVNQKWLGGMLTNWSTIETRLQKFKDLENKKK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE N++R+ D L++ L GI+ M LPD++ ++D +E AIQE L IP Sbjct: 127 TGTINRLPKKEAANLKRQLDHLQKYLGGIKYMTSLPDIVIIIDQQKEFTAIQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+ +PD+ D IP NDD+ SI + + A +G Sbjct: 187 TICLVDTDCDPDMTDIPIPANDDARASIRWILNKLTLAICEGR 229 >gi|307546394|ref|YP_003898873.1| 30S ribosomal protein S2 [Halomonas elongata DSM 2581] gi|307218418|emb|CBV43688.1| 30S ribosomal protein S2 [Halomonas elongata DSM 2581] Length = 248 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 113/248 (45%), Positives = 162/248 (65%), Gaps = 2/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +R LL++G FGH+ WNPKM +YIF RN HII+L T+P L +A+ V+ Sbjct: 1 MAHVNMRDLLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEHTLPALNEAIDVVEKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A +ILFV TK AS V E A R Q VN +WLGGM+TN+KT+ QSI++LR+LE + Sbjct: 61 AAANNKILFVGTKRSASKIVKEEANRVGQSFVNHRWLGGMLTNFKTIRQSIKRLRELETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R++DKL+R++ GI++MGGLPD +FV+D + E++AI EA +L Sbjct: 121 HEDGTFEKLTKKEVLMATREQDKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSA 240 IP++ VVDTNS+PD VDYVIPGNDDS R+I ++ +A A + ++ +SA Sbjct: 181 IPVIGVVDTNSDPDGVDYVIPGNDDSIRAIQIYVKAIADACARAKEGRPDEFVEVTEESA 240 Query: 241 GETVVHSK 248 G+ ++ Sbjct: 241 GDDAAAAE 248 >gi|69216175|gb|AAZ03904.1| ribosomal protein S2 [Ranunculus macranthus] Length = 235 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKQFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGRLNHLPKRDSAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEGRS 230 >gi|34762366|ref|ZP_00143368.1| SSU ribosomal protein S2P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741353|ref|ZP_04571834.1| SSU ribosomal protein S2P [Fusobacterium sp. 4_1_13] gi|27887948|gb|EAA25014.1| SSU ribosomal protein S2P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430885|gb|EEO41097.1| SSU ribosomal protein S2P [Fusobacterium sp. 4_1_13] Length = 247 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 100/259 (38%), Positives = 160/259 (61%), Gaps = 14/259 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A + + Sbjct: 1 MSVVSMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYEEMRKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+R+ Y VN++WLGGM+TN+ T+ + I+++++LE + Sbjct: 61 AEDGGKVLFVGTKKQAQEAIKEQAERAGMYYVNNRWLGGMLTNFSTIKKRIERMKELERM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +TKKE ++ KL + L GIRDM +PD ++VVD E+L ++EA L Sbjct: 121 DAEGILDTDYTKKEAAEFRKELSKLSKNLSGIRDMEKVPDAIYVVDVKMEELPVKEAHLL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A++DTN +PDL+ Y IP NDD+ RS+ L ++A+A ++G Sbjct: 181 GIPVFAMIDTNVDPDLITYPIPANDDAIRSVKLITSVMANAIVEGNQ------------G 228 Query: 241 GETVVHSKEGMQLEEDSQS 259 E V E + +EE S Sbjct: 229 IENVEPQSEEVNVEEGSAE 247 >gi|256371429|ref|YP_003109253.1| ribosomal protein S2 [Acidimicrobium ferrooxidans DSM 10331] gi|256008013|gb|ACU53580.1| ribosomal protein S2 [Acidimicrobium ferrooxidans DSM 10331] Length = 237 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 105/233 (45%), Positives = 154/233 (66%), Gaps = 1/233 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P T+ QLLE+GV FGH+ WNPKM +I+ R H+IDL T+ + ++ + + D Sbjct: 5 PLVTMSQLLEAGVHFGHQTRRWNPKMREHIYERRGGIHLIDLRHTLEGIDRSFRFVRDLS 64 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV TK QA D V + A+ + V+ +WLGGM+TN+ T+S+ + K+ + E + Sbjct: 65 ARGGTILFVGTKKQAQDAVSQYARLAGVPYVSHRWLGGMLTNFGTISRRVAKMAEYERMR 124 Query: 124 NKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ + + KKE L + R+ KL+ L GIR++ LPD +FV+DT +E +A+ EA RL I Sbjct: 125 DQGDFEAMPKKEALLLSRELAKLELNLGGIRNLTRLPDAIFVIDTPKEHIAVTEANRLGI 184 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 P+VAVVDTN++PDLV Y +PGNDD+ R+ LF L+A+A I+G RQ + A Sbjct: 185 PVVAVVDTNADPDLVTYPMPGNDDAIRACELFTRLMATAVIEGRQRQQAKPAA 237 >gi|122893979|ref|YP_001004175.1| ribosomal protein S2 [Ranunculus macranthus] gi|209573643|sp|A1XGM7|RR2_RANMC RecName: Full=30S ribosomal protein S2, chloroplastic gi|85540793|gb|ABC70745.1| ribosomal protein S2 [Ranunculus macranthus] Length = 236 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKQFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGRLNHLPKRDSAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEGRS 230 >gi|237734605|ref|ZP_04565086.1| 30S ribosomal protein S2 [Mollicutes bacterium D7] gi|229382425|gb|EEO32516.1| 30S ribosomal protein S2 [Coprobacillus sp. D7] Length = 282 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 95/236 (40%), Positives = 146/236 (61%), Gaps = 1/236 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE GV FGH+ WNPKM YIF RN +IIDL ++ + A + +++ A+GG Sbjct: 1 MKKLLEVGVHFGHQTKRWNPKMAPYIFTSRNGIYIIDLQKSSKKIDDAYKAMNEIAAKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ++LFV TK QA + V E A RS + VNS+WLGG +TN+KT+ + I++L +LE++ + Sbjct: 61 KVLFVGTKKQAQEAVKEEAIRSESFYVNSRWLGGTLTNFKTIQKRIRRLIELEKMEADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + ++++ KL++ L GI++M LP+ +FVVD E A+ EA+ L IP+ Sbjct: 121 FDLLPKKEVILLKKEAAKLEKNLGGIKEMRRLPNALFVVDPKAEHNAVAEAKILGIPVFG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 +VDTN +PD VDYVIP NDD+ R++ L +A A + + + E Sbjct: 181 IVDTNCDPDEVDYVIPANDDAIRAVKLIVAAMADAICEAKNEPLTVAYVKDEDDKE 236 >gi|307261022|ref|ZP_07542704.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869324|gb|EFN01119.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 238 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 109/241 (45%), Positives = 161/241 (66%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D A+A +G + S + A+ + Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEG---RGSNVEAELDATA 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|323510733|gb|ADX87365.1| ribosomal protine S2 [Pinus taeda] Length = 234 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 91/227 (40%), Positives = 132/227 (58%), Gaps = 2/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLLFDIAR 66 Query: 65 RGG-RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RG + L V TK QA+D V AA + VN KWLGGM+TNW T +QK +DL++ Sbjct: 67 RGRKQFLIVGTKYQATDLVASAATEGRCHYVNRKWLGGMLTNWSTTETRLQKFKDLKKEQ 126 Query: 124 NKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L I Sbjct: 127 DTGRFNQLPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQREESIALGECRTLGI 186 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 P + +VDT+ +PDLVD IP NDD SI L + + SA +G + Sbjct: 187 PTICLVDTDCDPDLVDIPIPANDDGIASIQLILNRLTSAICEGRELR 233 >gi|291276700|ref|YP_003516472.1| 30S ribosomal protein S2 [Helicobacter mustelae 12198] gi|290963894|emb|CBG39731.1| 30S ribosomal protein S2 [Helicobacter mustelae 12198] Length = 264 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 112/264 (42%), Positives = 167/264 (63%), Gaps = 3/264 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+R+IF R N HIIDL +T+ + ++ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QAS+ + E A++ VN +WLGGM+TN+ T+ +SI+KL +EE+ + Sbjct: 62 GKTIMFVGTKKQASETLKEYAEKIQIPYVNYRWLGGMLTNFGTIKKSIRKLEIIEEMEAS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKERL + RK++KL + L G+R M PD++FV+D +EK+A+ EARRL IP+ Sbjct: 122 GQIDMLTKKERLMVLRKKEKLNKYLGGVRHMKKAPDVVFVIDVVKEKIAVAEARRLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VDY IPGNDD+ RSI LFC + A ++G A +T++ + Sbjct: 182 VAPLDTNCDPDVVDYPIPGNDDAIRSIQLFCKEMTEAIVEGRAMIDGSQETETET--QAA 239 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 ++ ++E + E + G+ Sbjct: 240 TEEEKQNLMDEVTAEIEKEMTKGE 263 >gi|307245427|ref|ZP_07527515.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254381|ref|ZP_07536219.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258840|ref|ZP_07540572.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853768|gb|EFM85985.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862680|gb|EFM94636.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867191|gb|EFM99047.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 238 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 162/241 (67%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D ++A +G + S + A+ ++ Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAASAAVKEG---RGSNVEAELEATA 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|237688453|ref|YP_002905072.1| ribosomal protein S2 [Picea sitchensis] gi|226875282|gb|ACO89021.1| ribosomal protein S2 [Picea sitchensis] gi|307683683|dbj|BAJ19820.1| ribosomal protein S2 [Picea morrisonicola] Length = 234 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 91/223 (40%), Positives = 131/223 (58%), Gaps = 1/223 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D RG Sbjct: 10 LEEMMEARVHLGHKTRKWNPKMAPYIFTERKDTHIINLAKTARSLSEACDLAFDIAGRGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ + Sbjct: 70 QFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQDTGR 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP + Sbjct: 130 FNRPPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRILGIPTIC 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +VDT+ +PDLVD IP NDD SI L + SA +G + + Sbjct: 190 LVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEGRSLR 232 >gi|260580002|ref|ZP_05847832.1| ribosomal protein S2 [Haemophilus influenzae RdAW] gi|260581739|ref|ZP_05849536.1| ribosomal protein S2 [Haemophilus influenzae NT127] gi|329122927|ref|ZP_08251498.1| 30S ribosomal protein S2 [Haemophilus aegyptius ATCC 11116] gi|1573934|gb|AAC22571.1| ribosomal protein S2 (rpS2) [Haemophilus influenzae Rd KW20] gi|68057698|gb|AAX87951.1| 30S ribosomal protein S2 [Haemophilus influenzae 86-028NP] gi|260093286|gb|EEW77219.1| ribosomal protein S2 [Haemophilus influenzae RdAW] gi|260095332|gb|EEW79223.1| ribosomal protein S2 [Haemophilus influenzae NT127] gi|327471858|gb|EGF17298.1| 30S ribosomal protein S2 [Haemophilus aegyptius ATCC 11116] Length = 251 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 158/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 12 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 72 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 132 SQDGTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 192 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 250 Query: 242 E 242 E Sbjct: 251 E 251 >gi|52220799|ref|YP_086955.1| ribosomal protein S2 [Panax ginseng] gi|75289356|sp|Q68S17|RR2_PANGI RecName: Full=30S ribosomal protein S2, chloroplastic gi|51235302|gb|AAT98498.1| ribosomal protein S2 [Panax ginseng] Length = 236 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMKAGVHFGHGTKKWNPKMAPYISAKRKGIHITNLTRTARFLLEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A++ V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAANLVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|89092089|ref|ZP_01165044.1| 30S ribosomal protein S2 [Oceanospirillum sp. MED92] gi|89083824|gb|EAR63041.1| 30S ribosomal protein S2 [Oceanospirillum sp. MED92] Length = 246 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 113/254 (44%), Positives = 159/254 (62%), Gaps = 9/254 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T+R LL++GV FGH+ WNPKM ++IF RN HII+L T+P L AL I + Sbjct: 1 MAKITMRDLLKAGVHFGHQTRYWNPKMSKFIFGARNKIHIINLEHTLPALNGALDNIQNM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ++LFV TK AS V E A R+ VN +WLGGM+TN+KT+ QSI++LRDLE Sbjct: 61 AANKNKVLFVGTKRAASKIVKEEASRAGMPYVNHRWLGGMLTNYKTIRQSIRRLRDLESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L +R+ +KL+R++ GI++MGGLPD +FV+D + E++A+ EA +L Sbjct: 121 SQDGTFEKLTKKEALMRQREMEKLERSIGGIKEMGGLPDALFVIDVDHERIAVNEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNSNPD VD VIPGNDD+ R+I ++ A A ++G T Sbjct: 181 IPVIGVVDTNSNPDGVDVVIPGNDDALRAIQIYVKSAADACLEGTEA--------TAGDK 232 Query: 242 ETVVHSKEGMQLEE 255 V +E E Sbjct: 233 NEFVEVEENQAAAE 246 >gi|325579132|ref|ZP_08149088.1| 30S ribosomal protein S2 [Haemophilus parainfluenzae ATCC 33392] gi|325159367|gb|EGC71501.1| 30S ribosomal protein S2 [Haemophilus parainfluenzae ATCC 33392] Length = 251 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 105/241 (43%), Positives = 157/241 (65%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 12 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK A + V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 72 ASNNGKVLFVGTKRAAQEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 131 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 132 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS P VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 192 IPVFAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 250 Query: 242 E 242 E Sbjct: 251 E 251 >gi|290487166|gb|ADD29967.1| ribosomal protein S2 [Ficus sp. Moore 315] Length = 236 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMDAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V +A ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAQAGIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLKRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|290487162|gb|ADD29965.1| ribosomal protein S2 [Cornus florida] Length = 236 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ESGV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMESGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 KGKQFLIVGTKTKAADSVARAALKARCHYVNKKWLGGMLTNWATTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M G+PD++ +VD + E A++E L IP Sbjct: 127 TGKLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|290487148|gb|ADD29958.1| ribosomal protein S2 [Nelumbo nucifera] Length = 236 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM TNW T +QK RDL E Sbjct: 67 RGKQFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGRLNRLPKRDAAMLKRQLFNLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLISAICEGRS 230 >gi|121635755|ref|YP_976000.1| 30S ribosomal protein S2 [Neisseria meningitidis FAM18] gi|313667570|ref|YP_004047854.1| 30S ribosomal protein S2 [Neisseria lactamica ST-640] gi|166225287|sp|A1KWH6|RS2_NEIMF RecName: Full=30S ribosomal protein S2 gi|120867461|emb|CAM11233.1| 30S ribosomal protein S2 [Neisseria meningitidis FAM18] gi|309379322|emb|CBX22095.1| 30S ribosomal protein S2 [Neisseria lactamica Y92-1009] gi|313005032|emb|CBN86464.1| 30S ribosomal protein S2 [Neisseria lactamica 020-06] gi|325131341|gb|EGC54052.1| ribosomal protein S2 [Neisseria meningitidis M6190] gi|325137370|gb|EGC59958.1| ribosomal protein S2 [Neisseria meningitidis ES14902] Length = 242 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|290487146|gb|ADD29957.1| ribosomal protein S2 [Meliosma aff. cuneifolia Moore 333] Length = 236 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 85/227 (37%), Positives = 127/227 (55%), Gaps = 1/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 R + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 67 REKQFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRVEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRSSYR 233 >gi|300311493|ref|YP_003775585.1| 30S ribosomal protein S2 [Herbaspirillum seropedicae SmR1] gi|124483406|emb|CAM32576.1| 30S ribosomal subunit protein S2 [Herbaspirillum seropedicae] gi|300074278|gb|ADJ63677.1| 30S ribosomal subunit protein S2 [Herbaspirillum seropedicae SmR1] Length = 246 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 105/247 (42%), Positives = 162/247 (65%), Gaps = 3/247 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M Q+A + + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGMYQEAQKYVRQLSA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK QA + + A+R+ V+ +WLGGM+TN+KT+ SI++L+D+E + Sbjct: 62 NRGTILFVGTKRQAREILAAEAQRAGVPYVDQRWLGGMLTNFKTIKTSIKRLKDMEAAVE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L R+++KL++A+ GI+DMGG+PD +FV+D K AI EA +L IP Sbjct: 122 DGSVEKLSKKEALLFSREQEKLQKAIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ V YVIPGNDDS+++IAL+ +A A ++G A + + K G+ Sbjct: 182 VIGVVDTNHSPEGVTYVIPGNDDSAKAIALYARGMADAVLEGRANAVNDVVEAVK--GDE 239 Query: 244 VVHSKEG 250 V ++ Sbjct: 240 FVEVEQA 246 >gi|121608410|ref|YP_996217.1| 30S ribosomal protein S2 [Verminephrobacter eiseniae EF01-2] gi|166226767|sp|A1WHU2|RS2_VEREI RecName: Full=30S ribosomal protein S2 gi|121553050|gb|ABM57199.1| SSU ribosomal protein S2P [Verminephrobacter eiseniae EF01-2] Length = 250 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 100/249 (40%), Positives = 156/249 (62%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++R++LE+GV FGH+ WNPKM YIF RN HII+L +++P+ Q+A + + A Sbjct: 2 SVSMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQQAQKFVRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA + + A R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 62 NRGTILMVGTKRQAREILATEALRAGMPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKE+L R+ DKL++ + GI+DM LP+ +FV+D K+A+ EA++L I + Sbjct: 122 AGLDSLSKKEQLTFSREIDKLEKDIGGIQDMSALPNAIFVIDVGFHKIAVAEAKKLGIAL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 + VVDTN +P+ +DYVIPGNDDS++++AL+ +A A I+G A + + A + + Sbjct: 182 IGVVDTNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRANAINEVVKAVAPESSDE 241 Query: 244 VVHSKEGMQ 252 V E Sbjct: 242 FVEVDESAP 250 >gi|229829212|ref|ZP_04455281.1| hypothetical protein GCWU000342_01299 [Shuttleworthia satelles DSM 14600] gi|229792375|gb|EEP28489.1| hypothetical protein GCWU000342_01299 [Shuttleworthia satelles DSM 14600] Length = 240 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++QLLE+GV FGH+ WNPKM YIF ERN HIIDL QTVPM+ A + D V++GG Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIFTERNQIHIIDLQQTVPMIDNAYNAVYDIVSQGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ILFV TK QA D + E A R + V+ +WLGGM+TN+ TV I +L+++E + N Sbjct: 61 TILFVGTKKQAQDAIAEEATRCGMFYVDQRWLGGMLTNFSTVKTRIARLKEIERMRENGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE +E++ +KL++ L GI++M +PD +FVVD +E++ ++EA L I ++ Sbjct: 121 FDLLPKKEVAGLEKELEKLEKNLGGIKNMDRIPDAIFVVDPKKERICVKEAESLGITLIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + D+N++PD +DYVIPGNDD+ R+I L +A A I+ Sbjct: 181 IADSNADPDELDYVIPGNDDAIRAIRLITSTIADAVIEAKQ 221 >gi|71842276|ref|YP_277364.1| ribosomal protein S2 [Emiliania huxleyi] gi|122249156|sp|Q4G3A3|RR2_EMIHU RecName: Full=30S ribosomal protein S2, chloroplastic gi|52547756|gb|AAU81913.1| ribosomal protein S2 [Emiliania huxleyi] gi|60101519|gb|AAX13863.1| ribosomal protein S2 [Emiliania huxleyi] Length = 229 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 88/229 (38%), Positives = 138/229 (60%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +LL++GV FGH+ WNPKM YI+ ERN H+IDL QT +L A + + Sbjct: 1 MTVVTLGELLDAGVHFGHQASRWNPKMFPYIYAERNGIHVIDLVQTARLLTHAYEFVQKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 LFV TK QA+ + E A+R + VN++WLGG++TNW TV + ++ L++L+ + Sbjct: 61 SQEKKSFLFVGTKRQAASIIAEEAQRCGGHYVNNRWLGGILTNWSTVQKRVEYLKELDAK 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + R+++KL L G+ +M +PD++ +VD RE A+ E R+L Sbjct: 121 EEDGTLDRLPKKEAAFLRREQEKLSHNLRGLINMTQIPDIVILVDPKRETTALLECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI++++DTN +P+LVD IP NDD+ RS+ L +A ++G Sbjct: 181 IPIISILDTNCDPNLVDIPIPANDDAVRSVKLIISTLADGILEGKQSYQ 229 >gi|78779145|ref|YP_397257.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. MIT 9312] gi|123741472|sp|Q31BC4|RS2_PROM9 RecName: Full=30S ribosomal protein S2 gi|78712644|gb|ABB49821.1| SSU ribosomal protein S2P [Prochlorococcus marinus str. MIT 9312] Length = 233 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 91/232 (39%), Positives = 140/232 (60%), Gaps = 1/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +++E+G FGH+ WNPKM +YI+C RN HIIDL +T + A + + Sbjct: 1 MAVVSLSEMMEAGAHFGHQTRRWNPKMSKYIYCARNGVHIIDLVKTALCMNNAYKWTRNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R LFV TK QASD V + A R VN +WLGGM+TNW T+ I++L+DLE + Sbjct: 61 AKGGKRFLFVGTKKQASDVVAQEATRCGAAYVNQRWLGGMLTNWTTMKARIERLKDLERM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L Sbjct: 121 ESSGSIAMRPKKEAAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 I +V+++DTN +PDL + IP NDD+ RS+ L +A A +G ++ Sbjct: 181 ISLVSMLDTNCDPDLCEVPIPCNDDAVRSVQLILGRLADAINEGRKASNNEK 232 >gi|313901229|ref|ZP_07834717.1| ribosomal protein S2 [Clostridium sp. HGF2] gi|312954187|gb|EFR35867.1| ribosomal protein S2 [Clostridium sp. HGF2] Length = 317 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 92/225 (40%), Positives = 146/225 (64%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+ I+ RN +II+L +T+ L A + D Sbjct: 1 MSVVTMRKLLESGVHFGHQTRRWNPKMKPNIYASRNGVYIINLEKTLEQLDTAYAAMKDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA V+E A RS + VN +WLGG++TN++T+ + +++L ++EE+ Sbjct: 61 AEKGGKVLFVGTKKQAQAVVVEEALRSGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE +++++ +L+ L GI++M LP+ +FV+D E A+ EA++L Sbjct: 121 EANGTLDLYPKKEIAQVKKQKARLENFLGGIKEMKKLPNAIFVIDPKEEHNAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+ A+VDTN +P+ VDY I NDD+ RS+ L L+A A ++ Sbjct: 181 IPVFAMVDTNCDPETVDYPIASNDDAIRSVKLITTLMADAIVEAK 225 >gi|290487164|gb|ADD29966.1| ribosomal protein S2 [Euonymus americanus] Length = 236 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLKEMVEAGVHFGHGTRKWNPRMAPYISEKRKGIHITNLTKTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL-EELL 123 +G + L V TK++A+D V AA R+ + VN KWLGG++TNW T + K RD E Sbjct: 67 KGKQFLIVGTKTKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLHKFRDFRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD +E A++E L IP Sbjct: 127 TGGFNRLPKRDAAVLKRQLSHLQTYLGGIKYMMGLPDIVIIVDQQKEYTALRECIILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPTNDDAIASIRLILNKLVFAICEGRS 230 >gi|242620028|ref|YP_003002032.1| 30S ribosomal protein S2 [Aureococcus anophagefferens] gi|239997273|gb|ACS36796.1| 30S ribosomal protein S2 [Aureococcus anophagefferens] Length = 226 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 91/225 (40%), Positives = 139/225 (61%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + I QLL++GV FGH+ WNPKM YI+ ERN HI+DL QT +LQ+A + Sbjct: 1 MAEIKIAQLLKAGVHFGHKTPRWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDFVQLA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA++ + E A R+ + +N +W GG++TNW+TV IQ L LE Sbjct: 61 AEQGKTFLFVGTKPQAAELIKEEALRADSFYINHRWYGGLLTNWQTVKGRIQTLHTLEAQ 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 KKE ++ ++ KL+ L+G+++M G+PD+M V+D N E A++EA +L I Sbjct: 121 EETIFPTLPKKESASLRKELTKLRSQLNGVKNMSGVPDIMIVIDQNYELTAVREAIKLNI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 PI++++D+N +PDL+D IPGNDD+ SI + + + + G Sbjct: 181 PIISILDSNCDPDLIDIPIPGNDDAISSIKIILEALTDSIRLGRQ 225 >gi|126666180|ref|ZP_01737160.1| 30S ribosomal protein S2 [Marinobacter sp. ELB17] gi|126629502|gb|EBA00120.1| 30S ribosomal protein S2 [Marinobacter sp. ELB17] Length = 247 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 109/223 (48%), Positives = 152/223 (68%), Gaps = 1/223 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM +YIF RN HII+L QTVP + AL+ ++ Sbjct: 1 MAQVHMRDLLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEQTVPAMNDALKFVARL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFV TK A+ + E A+RS Q VN +WLGGM+TN+KT+ QSI + R+L+ Sbjct: 61 TENKNKILFVGTKRAAAKIIKEEAERSGQPFVNHRWLGGMLTNYKTIRQSIHRYRELQAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ DKL+R++ GI+DMGGLPD +FV+D + E++AI+EA +L Sbjct: 121 SKDGTFDKLTKKEALERSREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++ VVDTNSNPD VDYVIPGNDD+ R+I ++ VA ++ Sbjct: 181 IPVIGVVDTNSNPDGVDYVIPGNDDAIRAIQIYVKAVADTCLE 223 >gi|145589632|ref|YP_001156229.1| ribosomal protein S2 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189045005|sp|A4SYV1|RS2_POLSQ RecName: Full=30S ribosomal protein S2 gi|145048038|gb|ABP34665.1| SSU ribosomal protein S2P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 249 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 102/230 (44%), Positives = 152/230 (66%), Gaps = 1/230 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+G FGH+ W+PKM +IF RN HII+L +T+PM Q AL+ + Sbjct: 2 SVTMRQMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFAKQVAS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ ++S+WLGG +TN+KTV S+++L+D+ Sbjct: 62 NRGTILFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMAVAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L +R DKL++AL GI+D+ G+PD +FVVD K+AI EA +L IP Sbjct: 122 AGDWEKLSKKEALTNDRDLDKLQKALGGIQDLNGVPDAIFVVDVGYHKIAITEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 ++AVVDTN +P+ VDY+IPGNDDSS+++ L+ +A A ++G A + Sbjct: 182 VIAVVDTNHSPEGVDYIIPGNDDSSKAVLLYARGIADAILEGKANSVQEI 231 >gi|294828286|ref|NP_713478.2| 30S ribosomal protein S2 [Leptospira interrogans serovar Lai str. 56601] gi|293386137|gb|AAN50496.2| 30S ribosomal protein S2 [Leptospira interrogans serovar Lai str. 56601] Length = 289 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 106/281 (37%), Positives = 165/281 (58%), Gaps = 10/281 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + + G Sbjct: 1 MKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKLTSEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-- 125 ++LFV TK QA + A RS + +N++W GG++TNW TV +SI +L+ LE + Sbjct: 61 KVLFVGTKKQARGAIEREAIRSNMFFINNRWPGGLLTNWNTVKRSIARLKKLEGMEADNS 120 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+L + I Sbjct: 121 FEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARKLGLKI 180 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G E + Sbjct: 181 FAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEGTGGVVEQPRFSEDLDSEAL 240 Query: 245 VHSKEGMQLE-------EDSQSSESSVLDGQEVAVVPELMS 278 +G E ED S ++ + + P + Sbjct: 241 ALEYQGEYDESGKFIMDEDPDSKKTKTAEEPSATIEPSTTT 281 >gi|227547306|ref|ZP_03977355.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212265|gb|EEI80161.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 294 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 105/252 (41%), Positives = 163/252 (64%), Gaps = 2/252 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I Sbjct: 13 TMAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKT 72 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 73 TVAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEE 132 Query: 122 LL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA + Sbjct: 133 MDFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHK 192 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++ Sbjct: 193 LGIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEA 252 Query: 240 AGETVVHSKEGM 251 A + + ++ + Sbjct: 253 AEQPMAAWEKEL 264 >gi|197294564|ref|YP_001799105.1| 30S ribosomal protein S2 [Candidatus Phytoplasma australiense] gi|226697645|sp|B1VA80|RS2_PHYAS RecName: Full=30S ribosomal protein S2 gi|171853891|emb|CAM11853.1| 30S ribosomal protein S2 [Candidatus Phytoplasma australiense] Length = 260 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 106/224 (47%), Positives = 152/224 (67%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLESG FGH WNPKM++YIF RN HIID+ +T +++A Q +S Sbjct: 1 MAVVTMKQLLESGTNFGHSTRKWNPKMKKYIFTSRNGIHIIDIKKTSEKIEEAYQELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V +GG++LF+ TK Q +ME +KR QY VN +WLGG++TN+ T+ + IQ L DL + Sbjct: 61 VNQGGKVLFLGTKKQIQTSIMEESKRCGQYYVNHRWLGGILTNFHTILKRIQLLHDLHKQ 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + ++RKRDKL++ L GI+DM LP +FVVD +EK A+ EAR+L Sbjct: 121 EEDGVWKKLPKKEVVQLKRKRDKLEKFLGGIKDMKELPQALFVVDLEKEKNAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I + ++VDTN +PDLVDY+IP NDD+ RS+ L ++A+A I+G Sbjct: 181 IKVFSMVDTNCDPDLVDYIIPANDDAIRSVKLITWIIANACIEG 224 >gi|126208048|ref|YP_001053273.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae L20] gi|166225234|sp|A3MZT2|RS2_ACTP2 RecName: Full=30S ribosomal protein S2 gi|126096840|gb|ABN73668.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 238 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 161/241 (66%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ + L+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELETLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D A+A +G + S + A+ ++ Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEG---RGSNVEAELEATA 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|58698904|ref|ZP_00373769.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534585|gb|EAL58719.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila ananassae] Length = 276 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 125/268 (46%), Positives = 176/268 (65%), Gaps = 3/268 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTV 63 T+R L ESGV FGH+ WN K+ YI+ N HIIDL +T+P+LQ A++V+ D Sbjct: 1 VTVRDLAESGVHFGHKISRWNAKIAPYIYGVHQENRIHIIDLRKTLPLLQVAMKVLYDVA 60 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +GGRILFV TK QA D + A R QY VN +WLGGM+TNW TVS SI+ L E++L Sbjct: 61 FQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYEKIL 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N E+ TKKE NIE+K+ KL +AL GIR+MG +PD++F++DTN+E +A++EA++L IP Sbjct: 121 NDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDTNKEHIAVKEAKKLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA-GE 242 IVA++DTNS+PD + Y+IPGNDDS +SI L+C L + + GI + G G+ Sbjct: 181 IVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAGIESSLAKSGVKIDDIRGD 240 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + KE ++ + S+ + +EV Sbjct: 241 EFIQEKEDGIVQTKRRRSKVYKEEEREV 268 >gi|269214597|ref|ZP_05986884.2| ribosomal protein S2 [Neisseria lactamica ATCC 23970] gi|269209357|gb|EEZ75812.1| ribosomal protein S2 [Neisseria lactamica ATCC 23970] Length = 253 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 160/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 12 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 72 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 132 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 192 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 238 >gi|159161149|ref|YP_001542436.1| ribosomal protein S2 [Ceratophyllum demersum] gi|209573641|sp|A8SE74|RR2_CERDE RecName: Full=30S ribosomal protein S2, chloroplastic gi|148508432|gb|ABQ81439.1| ribosomal protein S2 [Ceratophyllum demersum] Length = 236 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D + AA+++ + VN KWLGGM TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADLIASAARKARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ +R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRFNHLPKRDAAMFKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTNS+PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|32480832|ref|NP_862743.1| ribosomal protein S2 [Calycanthus floridus var. glaucus] gi|75297118|sp|Q7YJY1|RR2_CALFG RecName: Full=30S ribosomal protein S2, chloroplastic gi|32399368|emb|CAD28710.1| ribosomal protein S2 [Calycanthus floridus var. glaucus] Length = 236 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 HINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 67 IGKHFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 AGKLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECLTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|320458047|dbj|BAJ68668.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 287 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 104/252 (41%), Positives = 162/252 (64%), Gaps = 2/252 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I Sbjct: 6 TMAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKT 65 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 66 TVAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEE 125 Query: 122 LL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA + Sbjct: 126 MDFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKETLAVEEAHK 185 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + + ++ Sbjct: 186 LGIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKTEGEA 245 Query: 240 AGETVVHSKEGM 251 A + + ++ + Sbjct: 246 AEQPMAAWEKEL 257 >gi|238021544|ref|ZP_04601970.1| hypothetical protein GCWU000324_01444 [Kingella oralis ATCC 51147] gi|237866158|gb|EEP67200.1| hypothetical protein GCWU000324_01444 [Kingella oralis ATCC 51147] Length = 237 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 161/220 (73%), Gaps = 1/220 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ++E+GV FGH+ WNPKM +YIF RN HII+L +TVP+ Q+A +V+ VA G Sbjct: 1 MRQMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQEVVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L + +L N E Sbjct: 61 TVLFVGTKRQAREIIKEEAQRAGMPYVDYRWLGGMLTNYKTVKQSIKRLEEKTAILANAE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + G+ KKE L++ R+ +KL+R+L GI++M GLPD +FV+DT + + EA +L IP++A Sbjct: 121 SSGYNKKELLDMTREVEKLERSLGGIKEMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 VVD+N++PDLV YVIPGNDDS+++I L+C +A A ++G Sbjct: 181 VVDSNNSPDLVQYVIPGNDDSAKAIRLYCRGIADAVLEGK 220 >gi|243181|gb|AAB21092.1| ribosomal protein S2 [Bacillus stearothermophilus, Peptide, 234 aa] Length = 234 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 90/234 (38%), Positives = 155/234 (66%), Gaps = 1/234 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 +++QLLE+GV FG + WNPKM++YIF ERN ++ID+ +TV +++A + + Sbjct: 1 SVISMKQLLEAGVHFGWQTRRWNPKMKKYIFTERNGIYLIDIQKTVKKVEEAYNFVRELA 60 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A GG+ILFV TK QA + V E A+R + VN + +GG +TN+ T+ + I++LR++E++ Sbjct: 61 ANGGKILFVGTKRQAQESVKEEAERCGMFYVNQRRIGGTLTNFATLQKRIKRLREIEKME 120 Query: 124 NKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 KKE + +++++++L++ + GI+DM LPD +FV+D +E++A+ EAR+L I Sbjct: 121 EDGVFDVLPKKEVIGLKKEKERLEKFIGGIKDMKELPDALFVIDPRKERIAVAEARKLNI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 PI+ +VDTN++P YVIP NDD+ R++ L +A A ++ + + + A+ Sbjct: 181 PIIGIVDTNNDPCEGGYVIPANDDAIRAVKLLTSKIADAVLEAKQGEEAAVAAE 234 >gi|39573650|dbj|BAD04076.1| ribosomal protein subunit 2 [Cistanche deserticola] Length = 245 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 84/223 (37%), Positives = 127/223 (56%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NIDLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRFNRLPKRDAAVVKRQLSRLQTYFGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGR 229 >gi|224417784|ref|ZP_03655790.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|253827126|ref|ZP_04870011.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|313141327|ref|ZP_07803520.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|253510532|gb|EES89191.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] gi|313130358|gb|EFR47975.1| 30S ribosomal protein S2 [Helicobacter canadensis MIT 98-5491] Length = 266 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 110/257 (42%), Positives = 164/257 (63%), Gaps = 3/257 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+++IF R N HIIDL +T+ + ++ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI+KL +EE+ + Sbjct: 62 GKTIMFVGTKKQASETLKQYAESVNAPYVNYRWLGGMLTNFSTIRKSIRKLEIIEEMESS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I+RK++KL + L G+R + PD++FV+D +EK+A+ EARRL IP+ Sbjct: 122 GQIDLLTKKEKLMIQRKKEKLTQYLGGVRQLKKAPDMIFVIDAAKEKIAVAEARRLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PD+VDY IPGNDD+ RSI LFC +A A +G A + + + + Sbjct: 182 VAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEIAEAITEGRAIAGGEIPENNEVSE--P 239 Query: 245 VHSKEGMQLEEDSQSSE 261 KE ++ E++ E Sbjct: 240 ASEKEKQEVIEEAMKEE 256 >gi|322514202|ref|ZP_08067264.1| 30S ribosomal protein S2 [Actinobacillus ureae ATCC 25976] gi|322119895|gb|EFX91904.1| 30S ribosomal protein S2 [Actinobacillus ureae ATCC 25976] Length = 238 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 161/241 (66%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAGLTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D ++A +G + S + A+ ++ Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAASAAVKEG---RGSNVEAELEATA 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|240081840|ref|ZP_04726383.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19] gi|268597936|ref|ZP_06132103.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19] gi|268551724|gb|EEZ46743.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19] Length = 242 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 113/242 (46%), Positives = 166/242 (68%), Gaps = 2/242 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+G+ FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGIHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSA 240 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + + A ++A Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQALQETVAAAQETA 240 Query: 241 GE 242 E Sbjct: 241 AE 242 >gi|239621370|ref|ZP_04664401.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515831|gb|EEQ55698.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 281 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 105/251 (41%), Positives = 162/251 (64%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 240 Query: 241 GETVVHSKEGM 251 + + + + Sbjct: 241 EQPMAAWEREL 251 >gi|239815580|ref|YP_002944490.1| 30S ribosomal protein S2 [Variovorax paradoxus S110] gi|259495228|sp|C5CKS0|RS2_VARPS RecName: Full=30S ribosomal protein S2 gi|239802157|gb|ACS19224.1| ribosomal protein S2 [Variovorax paradoxus S110] Length = 250 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 101/247 (40%), Positives = 155/247 (62%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q A++ A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V A+R+ V+++WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ +KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LDSLSKKEQLTFTREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A I+G + + V Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGRNSATGDVVKAIAEGSDEFVE 243 Query: 247 SKEGMQL 253 +EG Sbjct: 244 VEEGASA 250 >gi|228016561|gb|ACP51391.1| ribosomal protein S2 [Abies firma] Length = 234 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 89/226 (39%), Positives = 131/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T +A ++ D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSSSEACDLLFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L + TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ + Sbjct: 67 RGKQFLIIGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNQPPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + SA +G + + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEGRSLR 232 >gi|161485598|ref|NP_696662.2| 30S ribosomal protein S2 [Bifidobacterium longum NCC2705] gi|189439266|ref|YP_001954347.1| 30S ribosomal protein S2 [Bifidobacterium longum DJO10A] gi|312132642|ref|YP_003999981.1| rpsb [Bifidobacterium longum subsp. longum BBMN68] gi|317482867|ref|ZP_07941875.1| ribosomal protein S2 [Bifidobacterium sp. 12_1_47BFAA] gi|322689309|ref|YP_004209043.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis 157F] gi|322691321|ref|YP_004220891.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. longum JCM 1217] gi|209573726|sp|Q8G486|RS2_BIFLO RecName: Full=30S ribosomal protein S2 gi|238692051|sp|B3DRT0|RS2_BIFLD RecName: Full=30S ribosomal protein S2 gi|189427701|gb|ACD97849.1| Ribosomal protein S2 [Bifidobacterium longum DJO10A] gi|291516836|emb|CBK70452.1| SSU ribosomal protein S2P [Bifidobacterium longum subsp. longum F8] gi|311773593|gb|ADQ03081.1| RpsB [Bifidobacterium longum subsp. longum BBMN68] gi|316915712|gb|EFV37126.1| ribosomal protein S2 [Bifidobacterium sp. 12_1_47BFAA] gi|320456177|dbj|BAJ66799.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. longum JCM 1217] gi|320460645|dbj|BAJ71265.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. infantis 157F] Length = 281 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 105/251 (41%), Positives = 163/251 (64%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 240 Query: 241 GETVVHSKEGM 251 + + ++ + Sbjct: 241 EQPMAAWEKEL 251 >gi|223985630|ref|ZP_03635680.1| hypothetical protein HOLDEFILI_02986 [Holdemania filiformis DSM 12042] gi|223962397|gb|EEF66859.1| hypothetical protein HOLDEFILI_02986 [Holdemania filiformis DSM 12042] Length = 308 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 152/241 (63%), Gaps = 1/241 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LESGV FGH+ W+PKM+ YI+ +N +IIDL++T L +A + + +GG Sbjct: 1 MRKMLESGVHFGHQTRRWDPKMKPYIYTAKNGVYIIDLAKTQQKLDEAYEAMKAIAEKGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++LFV TK QA V++ A RS + VN +WLGG++TN++T+ + I++L ++EE+ + Sbjct: 61 KVLFVGTKKQAQSVVLDEALRSGSFYVNQRWLGGILTNYRTIQKRIKRLLEIEEMEASGS 120 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE I ++ +L+ L GI++M LPD +FVVD E A+ EA++L IP+ A Sbjct: 121 INVYPKKEVAQIRKEAARLENFLGGIKEMKKLPDAIFVVDPKEEHNAVAEAKKLNIPVFA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTN NP+ VD+ IP NDD+ RS+ L ++A A ++ SY + + A + + Sbjct: 181 MVDTNCNPEEVDFPIPSNDDAIRSVKLIIGVLADAIVETKGGLLSYAYQEDQEAEDITMK 240 Query: 247 S 247 Sbjct: 241 E 241 >gi|296454247|ref|YP_003661390.1| 30S ribosomal protein S2 [Bifidobacterium longum subsp. longum JDM301] gi|296183678|gb|ADH00560.1| ribosomal protein S2 [Bifidobacterium longum subsp. longum JDM301] Length = 281 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 106/251 (42%), Positives = 163/251 (64%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL R L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNRQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++A Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEAA 240 Query: 241 GETVVHSKEGM 251 + + ++ + Sbjct: 241 EQPMAAWEKEL 251 >gi|319639640|ref|ZP_07994387.1| 30S ribosomal protein S2 [Neisseria mucosa C102] gi|317399211|gb|EFV79885.1| 30S ribosomal protein S2 [Neisseria mucosa C102] Length = 242 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|162451403|ref|YP_001613771.1| hypothetical protein sce3132 [Sorangium cellulosum 'So ce 56'] gi|209573680|sp|A9GIN6|RS2_SORC5 RecName: Full=30S ribosomal protein S2 gi|161161985|emb|CAN93290.1| rpsB [Sorangium cellulosum 'So ce 56'] Length = 278 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 105/224 (46%), Positives = 155/224 (69%), Gaps = 1/224 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++GV FGH+ WNPKM +I+ RN HIIDL QT + ++A ++D V RGG Sbjct: 15 LRSLLDAGVHFGHQTKRWNPKMRPFIYGARNGIHIIDLDQTTRLFKRAYDFLTDAVGRGG 74 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LFV TK QA D V E A+R+ Y V ++WLGG +TN++T+ Q + +LR LE + + Sbjct: 75 HVLFVGTKRQAQDIVQEEARRAGMYFVTNRWLGGTLTNFRTIKQGLDRLRTLERMKEDGT 134 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + +E++R++L++ L G++ MGGLP +FV+D ++E +AI EAR+L +P+VA Sbjct: 135 YEQLLKKEVVRLEKERERLEKYLGGLKGMGGLPAAIFVIDPHQESIAISEARKLNVPVVA 194 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 + DTN +PDLVD+VIPGNDD+ RSI L VA A ++G R+ Sbjct: 195 ITDTNCDPDLVDFVIPGNDDAIRSIRLITARVADACVEGAQRRK 238 >gi|329912037|ref|ZP_08275648.1| SSU ribosomal protein S2p (SAe) [Oxalobacteraceae bacterium IMCC9480] gi|327545760|gb|EGF30894.1| SSU ribosomal protein S2p (SAe) [Oxalobacteraceae bacterium IMCC9480] Length = 248 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 106/246 (43%), Positives = 157/246 (63%), Gaps = 2/246 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM YIF RN HI++L +T+ M Q A++ I + Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIVNLEKTLAMYQDAMKYIQQLSS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-LL 123 G IL V TK QA + V A R+ V+ +WLGGM+TN+KT+ SI++L+++E + Sbjct: 62 NRGTILMVGTKRQAREIVAAEAARAGMPFVDQRWLGGMLTNFKTIKTSIKRLKEMEASIA 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L ER+ KL++++ GI+DMGG+PD +FVVD K AI EA +L IP Sbjct: 122 DGSVEKLSKKEGLMFEREMIKLQKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ V Y+IPGNDDSS++I L+ VA A ++G A + + + G+ Sbjct: 182 VIGVVDTNHSPEGVTYIIPGNDDSSKAIMLYARGVADAILEGRASSLNDV-VEAVKTGDD 240 Query: 244 VVHSKE 249 V E Sbjct: 241 FVEVSE 246 >gi|293375766|ref|ZP_06622037.1| ribosomal protein S2 [Turicibacter sanguinis PC909] gi|325841768|ref|ZP_08167462.1| ribosomal protein S2 [Turicibacter sp. HGF1] gi|292645635|gb|EFF63674.1| ribosomal protein S2 [Turicibacter sanguinis PC909] gi|325489887|gb|EGC92238.1| ribosomal protein S2 [Turicibacter sp. HGF1] Length = 244 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 95/224 (42%), Positives = 142/224 (63%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF RN +IIDL ++ + +A + + Sbjct: 1 MAIISMKQLLEAGVHFGHQTRRWNPKMKQYIFTSRNGIYIIDLQKSSKKIDEAYAAMQEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+++FV TK QA + + E A R QY VN +WLGG +TN+KT+ I +L LE + Sbjct: 61 TKDGGKVVFVGTKKQAQEAIKEEAIRGGQYWVNQRWLGGTLTNFKTIQSRIARLEQLEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE +N+ ++ ++L + L GIR+M LP MFVVD E++AI EAR+L Sbjct: 121 EQDGTFEVLPKKEVINLRKEMERLNKFLGGIREMKELPAAMFVVDPRSERIAIAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ +VDTN +PD VDYVIP NDD+ R++ L + I+ Sbjct: 181 IPVFGIVDTNCDPDDVDYVIPANDDAIRAVRLIVGKMVDGIIEA 224 >gi|288818008|ref|YP_003432355.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6] gi|288787407|dbj|BAI69154.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6] gi|308751608|gb|ADO45091.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6] Length = 276 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 100/268 (37%), Positives = 168/268 (62%), Gaps = 6/268 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R LLE+GV FGH WNPKM +++ RN HIIDL++TV L++A ++D Sbjct: 1 MAVISMRDLLEAGVHFGHSKGRWNPKMAPFLYGVRNGIHIIDLNKTVVYLEQAYNFVADR 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +A G ILFV TK QA D + E A+R+ +N +W+GG++TN++TV +S+ KL+ LE + Sbjct: 61 IAEGAEILFVGTKKQAKDVIKEEAERAGVPYINERWVGGLLTNFRTVKKSMLKLKTLERM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + RK + L++ GI ++ +PD++++VDT RE +A+QEAR+L Sbjct: 121 EAEGVFEVLPKKEVRMMRRKMEHLRKLYAGILNLERVPDMVWIVDTVREHIAVQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 + IVA+ D+N +PD++DY +PGNDD+ +SI L +A A I+G R+ +G + + Sbjct: 181 VTIVAIADSNCDPDVIDYPVPGNDDAIKSIKLLTAKIADAVIEGKQRR-ERLGEEVPAEA 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 ++ + +EE+ ++ ++ E Sbjct: 240 ----VKRKVVTVEEEEKALFEKAMEMSE 263 >gi|223041501|ref|ZP_03611704.1| 30S ribosomal protein S2 [Actinobacillus minor 202] gi|223017759|gb|EEF16166.1| 30S ribosomal protein S2 [Actinobacillus minor 202] Length = 236 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 109/241 (45%), Positives = 158/241 (65%), Gaps = 6/241 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK ASD V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKVLFVGTKRAASDAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D V +A +G + + A Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSVVAAIKEGKG-----ANVEAELAA 235 Query: 242 E 242 E Sbjct: 236 E 236 >gi|114329735|ref|YP_740554.1| ribosomal protein S2 [Platanus occidentalis] gi|122166046|sp|Q09G57|RR2_PLAOC RecName: Full=30S ribosomal protein S2, chloroplastic gi|114054373|gb|ABI49767.1| ribosomal protein S2 [Platanus occidentalis] Length = 236 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAR 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG R L V TK++ D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 67 RGKRFLIVGTKNKVVDLVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGRLNHLPKRDAAMLKRQLSHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLVLNKLVSAICEGRS 230 >gi|91761975|ref|ZP_01263940.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1002] gi|91717777|gb|EAS84427.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1002] Length = 273 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 128/270 (47%), Positives = 182/270 (67%), Gaps = 15/270 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P TI+QLLE+GV GH+ WNPKM++YIF +R++ HIIDL+QT+ + AL+ + Sbjct: 1 MKIPSLTIQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTNVALEKVY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +T+A G+ILFV+TK QAS+ + E AK + QY VN +WLGGM+TNW T+S SI+K++ E Sbjct: 61 NTIANNGKILFVSTKKQASEAIAEVAKETGQYFVNYRWLGGMLTNWGTISGSIKKMKKYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L EN+GFTKKE L + K+DKL+RAL GI +M +PDL+F++DTN E LAI EA +L Sbjct: 121 ADLVAENRGFTKKELLKMSVKKDKLERALGGIAEMKKVPDLVFIIDTNYESLAIAEASKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI A++D+NSNPD +DY IPGNDD+ R+I L+C+LV ++A Sbjct: 181 GIPICAILDSNSNPDGIDYPIPGNDDARRAIDLYCNLVKETI---------------ENA 225 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + E +D+++ E+S QE+ Sbjct: 226 KKAAPSKSEEKPDVDDTKTKETSSKTIQEI 255 >gi|23326784|gb|AAN25298.1| 30S ribosomal protein S2 [Bifidobacterium longum NCC2705] Length = 296 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 105/252 (41%), Positives = 163/252 (64%), Gaps = 2/252 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I Sbjct: 15 TMAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKT 74 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 75 TVAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEE 134 Query: 122 LL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA + Sbjct: 135 MDFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHK 194 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + A+ ++ Sbjct: 195 LGIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKAEGEA 254 Query: 240 AGETVVHSKEGM 251 A + + ++ + Sbjct: 255 AEQPMAAWEKEL 266 >gi|229817673|ref|ZP_04447955.1| hypothetical protein BIFANG_02944 [Bifidobacterium angulatum DSM 20098] gi|229785462|gb|EEP21576.1| hypothetical protein BIFANG_02944 [Bifidobacterium angulatum DSM 20098] Length = 269 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 108/258 (41%), Positives = 163/258 (63%), Gaps = 2/258 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ A I T Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDVAYDFIKST 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSAQATRVNMPYVSERWLGGMLTNFQTVSKRVARLKELEEV 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+MG P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMGRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ + + Sbjct: 181 GIPVVAIVDTNTDPEAVEYPIPANDDAIRGIELLTSLMADAVAEGLIERSGKATKAEGES 240 Query: 241 GETVVHSKEGMQLEEDSQ 258 E + + E LE + Sbjct: 241 AEQPMAAWEKELLENQAP 258 >gi|115604923|ref|YP_784375.1| ribosomal protein S2 [Drimys granadensis] gi|122164452|sp|Q06H08|RR2_DRIGR RecName: Full=30S ribosomal protein S2, chloroplastic gi|112032651|gb|ABH88286.1| ribosomal protein S2 [Drimys granadensis] Length = 236 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFFSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM TNW T + K RDL+ E Sbjct: 67 RGKHFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMSTNWSTTETRLHKFRDLKAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGKLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECLTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN NPDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCNPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|15677921|ref|NP_275089.1| 30S ribosomal protein S2 [Neisseria meningitidis MC58] gi|218767332|ref|YP_002341844.1| 30S ribosomal protein S2 [Neisseria meningitidis Z2491] gi|54039453|sp|P66540|RS2_NEIMB RecName: Full=30S ribosomal protein S2 gi|54041954|sp|P66539|RS2_NEIMA RecName: Full=30S ribosomal protein S2 gi|7227364|gb|AAF42418.1| 30S ribosomal protein S2 [Neisseria meningitidis MC58] gi|121051340|emb|CAM07630.1| 30S ribosomal protein S2 [Neisseria meningitidis Z2491] gi|261393423|emb|CAX51060.1| 30S ribosomal protein S2 [Neisseria meningitidis 8013] gi|316983993|gb|EFV62972.1| ribosomal protein S2 [Neisseria meningitidis H44/76] gi|325127290|gb|EGC50226.1| ribosomal protein S2 [Neisseria meningitidis N1568] gi|325139420|gb|EGC61960.1| ribosomal protein S2 [Neisseria meningitidis CU385] gi|325141374|gb|EGC63857.1| ribosomal protein S2 [Neisseria meningitidis 961-5945] gi|325199189|gb|ADY94645.1| ribosomal protein S2 [Neisseria meningitidis G2136] gi|325205049|gb|ADZ00503.1| ribosomal protein S2 [Neisseria meningitidis M01-240355] Length = 242 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|332977790|gb|EGK14548.1| 30S ribosomal protein S2 [Psychrobacter sp. 1501(2011)] Length = 263 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 113/255 (44%), Positives = 162/255 (63%), Gaps = 4/255 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A+ Sbjct: 10 MRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKNN 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK AS + E A R+ V+ +WLGGM+TNWKT+ QSI +L++LE+ + Sbjct: 70 KVLFVGTKRAASGVIREQALRAGMPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDGT 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TK+E L R +KL+R+L GI++MGGLPD +FVVD + E +AI+EA+ L IP++ Sbjct: 130 FAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVIG 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI--ARQHSYMGADTKSAGETV 244 +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I G A+ + A T++ E Sbjct: 190 IVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAGKEYAKTQAGGAAATEAPAED- 248 Query: 245 VHSKEGMQLEEDSQS 259 V ++E E DS Sbjct: 249 VQTEEAAAPEADSAE 263 >gi|270160171|ref|ZP_06188827.1| ribosomal protein S2 [Legionella longbeachae D-4968] gi|289165056|ref|YP_003455194.1| 30S ribosomal protein S2 [Legionella longbeachae NSW150] gi|269988510|gb|EEZ94765.1| ribosomal protein S2 [Legionella longbeachae D-4968] gi|288858229|emb|CBJ12097.1| 30S ribosomal protein S2 [Legionella longbeachae NSW150] Length = 253 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 108/252 (42%), Positives = 156/252 (61%), Gaps = 1/252 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++R+LLE+G FGHR WNP+M YIF RN HII+L +T+ ML L + + Sbjct: 2 NVSMRELLEAGAHFGHRTRFWNPEMGEYIFGSRNKIHIINLEKTMVMLNDVLNYVGRLAS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +ILFV TK A + + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ Sbjct: 62 NKAKILFVGTKRAAQESIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKE 121 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K KKE L + R+ +KL+R L GI +MGGLPD +FVVD E +A++EA RLRIP Sbjct: 122 KGLFNDMIKKEALMLTRELEKLERGLGGIENMGGLPDALFVVDVGFEHIAVEEAHRLRIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ +VDTN++P +DY+IPGNDDS R++ ++ VA A +D +G+ E Sbjct: 182 VIGIVDTNNSPKNIDYIIPGNDDSMRAVDIYVRCVADAILDAKGSNTVGVGSSNAEFVEV 241 Query: 244 VVHSKEGMQLEE 255 V + + + E Sbjct: 242 VEQASDATKTGE 253 >gi|149390529|ref|YP_001294173.1| ribosomal protein S2 [Buxus microphylla] gi|209573638|sp|A6MM25|RR2_BUXMI RecName: Full=30S ribosomal protein S2, chloroplastic gi|146762274|gb|ABQ45238.1| ribosomal protein S2 [Buxus microphylla] Length = 236 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 67 RGKQFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M LPD++ +VD E AI+E L IP Sbjct: 127 TARLARLPKRDAAMLKRQLSHLQTYLGGIKYMTRLPDIVIIVDQQEEYTAIRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++ ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 MICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|90022242|ref|YP_528069.1| 30S ribosomal protein S2 [Saccharophagus degradans 2-40] gi|123395864|sp|Q21HH2|RS2_SACD2 RecName: Full=30S ribosomal protein S2 gi|89951842|gb|ABD81857.1| SSU ribosomal protein S2P [Saccharophagus degradans 2-40] Length = 246 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 108/236 (45%), Positives = 155/236 (65%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P ++R +L++GV FGH+ WNPKM +YIF RN HII+L TVP +AL ++ Sbjct: 1 MPTVSMRDMLQAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNEALAIVKQL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ ++LFV TK A + E A+RS V+ +WLGGM+TN+KT+ SI++ R+LE Sbjct: 61 GSQKKKVLFVGTKRAAQKSIKEQAERSNMPFVSHRWLGGMLTNYKTIRASIRRYRELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL++++ GI+DMGGLPD +F++D E++AIQEA +L Sbjct: 121 SQDGTFEKLTKKEALVRTRIMEKLEKSIGGIKDMGGLPDALFIIDVEHERIAIQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP++ VVDTNS+P VDYVIPGNDD+ R+I L+ VA A I+G A S D Sbjct: 181 IPVIGVVDTNSDPAGVDYVIPGNDDAIRAIKLYATAVADACIEGAADSASVPNKDE 236 >gi|319957320|ref|YP_004168583.1| SSU ribosomal protein s2p [Nitratifractor salsuginis DSM 16511] gi|319419724|gb|ADV46834.1| SSU ribosomal protein S2P [Nitratifractor salsuginis DSM 16511] Length = 286 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 106/222 (47%), Positives = 151/222 (68%), Gaps = 1/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+++IF ER N +IIDL +T+ + V+ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKFIFGERKNIYIIDLQKTLRYFKYTYNVVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +LFV TK QA V E A+R+ V ++WLGGM+TN+ T+ +SI+KL +E++ N Sbjct: 62 GKTVLFVGTKKQARSAVKEHAERAGMPYVATRWLGGMLTNYPTIKKSIRKLEIIEQMEEN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE L + RK++KL L+G R M LPD+MFV+D +E +A++EARR+ +P+ Sbjct: 122 GQINLLTKKEALMLRRKKEKLLNYLEGYRHMKKLPDMMFVIDAVKEHIAVKEARRMGMPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +A +DTN +PDL+DY IPGNDD+ RSI LFC +A A I+G Sbjct: 182 IAPLDTNCDPDLIDYPIPGNDDAIRSINLFCREIADAIIEGK 223 >gi|257784508|ref|YP_003179725.1| 30S ribosomal protein S2 [Atopobium parvulum DSM 20469] gi|257473015|gb|ACV51134.1| ribosomal protein S2 [Atopobium parvulum DSM 20469] Length = 250 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 104/245 (42%), Positives = 157/245 (64%), Gaps = 5/245 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + TI+ LL++G +GH+ WNPKM+ YIF +RN +I+DL QT+ A + Sbjct: 5 MA-AKITIQTLLDAGCHYGHQTRRWNPKMKPYIFGDRNGIYILDLKQTMLGADAAYTFLK 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++GGR+LFV TK QA + + A R+ +N +WLGGM+TN+ T+ I++L +LE Sbjct: 64 NIASKGGRVLFVGTKKQAQEPIATEATRANMPYINQRWLGGMLTNFVTMRSRIKRLEELE 123 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + KKE+ ++ KL+ L G+RDM LP +FVVD+ RE+ AI+EA R Sbjct: 124 AMVEDGRMATLPKKEQALKNKELTKLQLNLGGVRDMTSLPQALFVVDSKREENAIREANR 183 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH---SYMGAD 236 L IP+V+++DTNS+PD+VDY IP NDD+ RSI+L C L A A + G ++ MGA+ Sbjct: 184 LHIPVVSLLDTNSDPDVVDYGIPANDDAIRSISLMCQLAADAILAGSGKEQISAEEMGAE 243 Query: 237 TKSAG 241 +K+ Sbjct: 244 SKTPA 248 >gi|227481108|emb|CAP62487.1| ribosomal protein S2 [Ceratophyllum demersum] Length = 236 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D + AA ++ + VN KWLGGM TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADLIASAAIKARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ +R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRFNHLPKRDAAMFKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTNS+PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|269118719|ref|YP_003306896.1| ribosomal protein S2 [Sebaldella termitidis ATCC 33386] gi|268612597|gb|ACZ06965.1| ribosomal protein S2 [Sebaldella termitidis ATCC 33386] Length = 263 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 107/249 (42%), Positives = 163/249 (65%), Gaps = 3/249 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ +KA I D Sbjct: 1 MAVVSMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLDSTEKAYNFIRDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++GG++LFV TK QA + + E A R+ + VN++WLGG++TN T+ +Q+L+DLEE+ Sbjct: 61 TSQGGKVLFVGTKKQAQEAIREEAVRAGGFYVNNRWLGGLLTNLNTIKTRVQRLKDLEEM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ +TKKE + ++ KL + L GI++M +P +FVVD +E LA++EA++L Sbjct: 121 DQNGMLDESYTKKEAGLLRKEMAKLSKNLGGIKEMNKVPAALFVVDIKKEFLALEEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA++DTN +PDLV Y IP NDD+ RS+ LF +++A+A I+G Q + S Sbjct: 181 GIPVVALIDTNVDPDLVTYKIPANDDAIRSVKLFSEIMANAIIEGNNGQEAAEANAAAS- 239 Query: 241 GETVVHSKE 249 G+ V+ E Sbjct: 240 GDMPVNEDE 248 >gi|213691940|ref|YP_002322526.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254764458|sp|B7GQR8|RS2_BIFLI RecName: Full=30S ribosomal protein S2 gi|213523401|gb|ACJ52148.1| ribosomal protein S2 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 281 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 104/251 (41%), Positives = 162/251 (64%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKETLAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + + ++A Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGANKTEGEAA 240 Query: 241 GETVVHSKEGM 251 + + ++ + Sbjct: 241 EQPMAAWEKEL 251 >gi|319793983|ref|YP_004155623.1| ribosomal protein s2 [Variovorax paradoxus EPS] gi|315596446|gb|ADU37512.1| ribosomal protein S2 [Variovorax paradoxus EPS] Length = 251 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 106/253 (41%), Positives = 164/253 (64%), Gaps = 5/253 (1%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q A++ A Sbjct: 4 TMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V A+R+ V+++WLGGM+TN+KTV SI++L+D++ Sbjct: 64 GTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L R+ KL++ + GI+DM LPD +FV+D K+A+ EA++L IP++ Sbjct: 124 LDSLSKKEQLTFSREIAKLEKDIGGIQDMAALPDAIFVIDVGFHKIAVAEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVD+N +P+ +DYVIPGNDDSS+++ L+ +A A I+G ++S G K+ E Sbjct: 184 VVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEG---RNSAGGDVVKAIAEG--S 238 Query: 247 SKEGMQLEEDSQS 259 S E +++EE + + Sbjct: 239 SDEFVEVEESASA 251 >gi|290487144|gb|ADD29956.1| ribosomal protein S2 [Lonicera japonica] Length = 236 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGIRKWNPKMAPYISAKRKGNHITNLTRTARFLSEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R + L V TK +A+D V AA R+ + VN KW GGM+TNW T + K RDL Sbjct: 67 RRKQFLIVGTKKKAADSVARAAIRARCHYVNKKWPGGMLTNWSTTEMRLHKFRDLRTQQK 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ VVD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRRLSHLQTYLGGIKYMTGLPDIVIVVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADLPIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|118594913|ref|ZP_01552260.1| 30S ribosomal protein S2 [Methylophilales bacterium HTCC2181] gi|118440691|gb|EAV47318.1| 30S ribosomal protein S2 [Methylophilales bacterium HTCC2181] Length = 254 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 111/222 (50%), Positives = 153/222 (68%), Gaps = 1/222 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+LE+GV FGH+ WNPKM YIF +RN HI++L +T+PM ++AL+ A Sbjct: 3 ITMRQMLEAGVHFGHQTRYWNPKMAPYIFGDRNKIHIVNLEKTLPMFEEALKYSKTLAAN 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GRILFV TK QA D + E A R+ VN +WLGGM+TN+KTV QSI++L +LE + Sbjct: 63 KGRILFVGTKRQARDILKEEALRAGCAYVNHRWLGGMLTNFKTVKQSIKRLVELETMFED 122 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + TKKE LN++R DKL+R++ GI++M LPD +FVVD E A+ EA +L IPI Sbjct: 123 GSLEKITKKEALNLKRDYDKLERSIGGIKNMTALPDAIFVVDVGFESGAVVEATKLGIPI 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + VVDTN++ D + YVIPGNDDSSR+I L+ +A ++G Sbjct: 183 IGVVDTNNSTDNIAYVIPGNDDSSRAIRLYARGMADTILEGK 224 >gi|241759080|ref|ZP_04757191.1| ribosomal protein S2 [Neisseria flavescens SK114] gi|261380648|ref|ZP_05985221.1| ribosomal protein S2 [Neisseria subflava NJ9703] gi|297250618|ref|ZP_06864669.2| ribosomal protein S2 [Neisseria polysaccharea ATCC 43768] gi|241320682|gb|EER56935.1| ribosomal protein S2 [Neisseria flavescens SK114] gi|284796629|gb|EFC51976.1| ribosomal protein S2 [Neisseria subflava NJ9703] gi|296838458|gb|EFH22396.1| ribosomal protein S2 [Neisseria polysaccharea ATCC 43768] Length = 242 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|255067272|ref|ZP_05319127.1| ribosomal protein S2 [Neisseria sicca ATCC 29256] gi|255048423|gb|EET43887.1| ribosomal protein S2 [Neisseria sicca ATCC 29256] Length = 242 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|11467570|ref|NP_043716.1| ribosomal protein S2 [Odontella sinensis] gi|1350888|sp|P49490|RR2_ODOSI RecName: Full=30S ribosomal protein S2, chloroplastic gi|1185265|emb|CAA91748.1| 30S ribosomal protein S2 [Odontella sinensis] Length = 229 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 140/225 (62%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ QLLE+GV FGH+ + WNPKM YI+ ERNN HI+DL Q+ +L++A + Sbjct: 1 MADITLAQLLEAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQSAQLLKEANSYLQSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 +G LF+ TK QAS + + AKR Y VN +WLGGM+TNW T+ I +L+ LE E Sbjct: 61 AEKGQTFLFIGTKPQASALIAQEAKRCNSYYVNHRWLGGMLTNWVTLKSRIARLKTLEQE 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ KKE ++ +KL++ L+GI+DM LPD+ V+D RE A+ E R+L Sbjct: 121 EADQVFNLLPKKEASLRRKELEKLRKNLNGIKDMEKLPDVAIVIDQKREMTAVIECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPI++++DTN +PDLVD IPGNDD+ SI L + + G Sbjct: 181 IPIISILDTNCDPDLVDIPIPGNDDAVGSIKLVLQSLTDSINTGK 225 >gi|71083604|ref|YP_266323.1| 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1062] gi|71062717|gb|AAZ21720.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1062] Length = 273 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 128/270 (47%), Positives = 182/270 (67%), Gaps = 15/270 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P TI+QLLE+GV GH+ WNPKM++YIF +R++ HIIDL+QT+ + AL+ + Sbjct: 1 MKIPSLTIQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTNVALEKVY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +T+A G+ILFV+TK QAS+ + E AK + QY VN +WLGGM+TNW T+S SI+K++ E Sbjct: 61 NTIANNGKILFVSTKKQASEAIAEVAKETGQYFVNYRWLGGMLTNWGTISGSIKKMKKYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L EN+GFTKKE L + K+DKL+RAL GI +M +PDL+F++DTN E LAI EA +L Sbjct: 121 ADLVAENRGFTKKELLKMSVKKDKLERALGGIAEMKKVPDLVFIIDTNYESLAIAEASKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI A++D+NSNPD +DY IPGNDD+ R+I L+C+LV ++A Sbjct: 181 GIPICAILDSNSNPDGIDYPIPGNDDARRAIDLYCNLVKETI---------------ENA 225 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + E +D+++ E+S QE+ Sbjct: 226 KKAAPSKFEEKPDVDDTKTKETSSKTIQEI 255 >gi|325129310|gb|EGC52148.1| ribosomal protein S2 [Neisseria meningitidis OX99.30304] gi|325133276|gb|EGC55942.1| ribosomal protein S2 [Neisseria meningitidis M13399] gi|325135329|gb|EGC57950.1| ribosomal protein S2 [Neisseria meningitidis M0579] gi|325143512|gb|EGC65833.1| ribosomal protein S2 [Neisseria meningitidis M01-240013] gi|325203079|gb|ADY98533.1| ribosomal protein S2 [Neisseria meningitidis M01-240149] gi|325207002|gb|ADZ02455.1| ribosomal protein S2 [Neisseria meningitidis M04-240196] gi|325208952|gb|ADZ04404.1| ribosomal protein S2 [Neisseria meningitidis NZ-05/33] Length = 242 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + I Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAIRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|255994507|ref|ZP_05427642.1| ribosomal protein S2 [Eubacterium saphenum ATCC 49989] gi|255993220|gb|EEU03309.1| ribosomal protein S2 [Eubacterium saphenum ATCC 49989] Length = 263 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 106/251 (42%), Positives = 157/251 (62%), Gaps = 3/251 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+L+ESG+ FGH+ WNPKM YIF ERN HIIDL +T + KA ++ Sbjct: 1 MGVVTVRKLMESGLHFGHQTKRWNPKMAPYIFTERNGVHIIDLQKTEKQVNKAYAFFANV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK QA + AKR + VN +WLGGM+TN+KT++Q I++LR +EE+ Sbjct: 61 VKTGKPILFVGTKKQARSVIEAEAKRCDMFYVNHRWLGGMLTNYKTITQRIRRLRKIEEM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +KKE L ++R+ D+L++ L GI+DM G+P +F++D E A++EA++L Sbjct: 121 AEDGTFEKLSKKEVLQLKREGDRLEKFLGGIKDMRGIPAALFIIDPKTENNAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+ DTN+NP+ VD IPGN D R L L+A A ++G +Q + Sbjct: 181 IPIVALADTNANPEEVDIPIPGNVDGVRGARLITSLMADAILEG--KQGESFKDEEAPKA 238 Query: 242 ETVVHSKEGMQ 252 + +KEG++ Sbjct: 239 DEDEKAKEGIE 249 >gi|302879004|ref|YP_003847568.1| 30S ribosomal protein S2 [Gallionella capsiferriformans ES-2] gi|302581793|gb|ADL55804.1| ribosomal protein S2 [Gallionella capsiferriformans ES-2] Length = 242 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 107/240 (44%), Positives = 160/240 (66%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+RQ+L++GV FGH+ WNPKM +IF RN HII+L ++V + +A + A+ Sbjct: 3 VTMRQMLDAGVHFGHQTRFWNPKMAPFIFGHRNRIHIINLEKSVALFAEAESYVRKLSAK 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +LFVATK QA + + E A R+ VN +WLGGM+TN+KTV QSI++LR+LE + + Sbjct: 63 KGTVLFVATKRQAREILQEEAVRANSPFVNHRWLGGMLTNYKTVQQSIKRLRELEAITAE 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G +KKE L + R+ +KL R+L GI+DM LPD +FV+D +K AI EA++L IP++ Sbjct: 123 GAEGVSKKEALVMARELEKLNRSLGGIKDMPNLPDAIFVIDVGYQKGAIVEAKKLGIPVI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +VDTN++P VD+VIPGNDDS+++I L+ +A A ++G A+ + + E V Sbjct: 183 GIVDTNNSPIGVDFVIPGNDDSTQAIRLYARGIADAVLEGRAQALNELVQQVAEEPEQVA 242 >gi|69216179|gb|AAZ03906.1| ribosomal protein S2 [Yucca schidigera] Length = 235 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIHLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKNFLIVGTKNKVADLVASAAIRARCHYVNRKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGKLNRLPKRDAAMLKRKLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|50346771|ref|YP_053144.1| ribosomal protein S2 [Nymphaea alba] gi|75290271|sp|Q6EW59|RR2_NYMAL RecName: Full=30S ribosomal protein S2, chloroplastic gi|50250316|emb|CAF28582.1| ribosomal protein S2 [Nymphaea alba] Length = 236 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH W+P+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWDPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG L V TK +A+D V AA R+ + VN KWLGGM TNW T +QK RDL Sbjct: 67 RGKHFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQKFRDLRVRAE 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ + L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 MGQFSRLPKRDAAILKRQLSHFQTYLGGIKYMTGLPDIVIIIDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA G + Sbjct: 187 TICLIDTNCDPDLADIPIPANDDAIASIRLILNKLVSAICQGRS 230 >gi|293400525|ref|ZP_06644670.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305551|gb|EFE46795.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 317 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 95/255 (37%), Positives = 157/255 (61%), Gaps = 2/255 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R+LLESGV FGH+ WNPKM+ I+ RN +II+L +T+ L A + + Sbjct: 1 MSVVSMRKLLESGVHFGHQTRRWNPKMKPNIYASRNGVYIINLEKTLEQLDTAYAAMREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG++LFV TK QA V+E A RS + VN +WLGG++TN++T+ + +++L ++EE+ Sbjct: 61 AEKGGKVLFVGTKKQAQAVVVEEALRSGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE +++++ +L+ L GI++M LP+ +FV+D E A+ EA++L Sbjct: 121 EANGTLDLYPKKEIAQVKKQKARLENFLGGIKEMKKLPNALFVIDPKEEHNAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTN +P++VDY I NDD+ RS+ L L+A A ++ S + ++ Sbjct: 181 IPVFAMVDTNCDPEMVDYPIASNDDAIRSVKLITTLMADAIVEAKGGLLSVAHSVDEN-E 239 Query: 242 ETVVHSKEGMQLEED 256 E V + +EE Sbjct: 240 EDVTMKDVIINVEEQ 254 >gi|139388899|ref|YP_001123626.1| ribosomal protein S2 [Lepidium virginicum] gi|209573610|sp|A4QL95|RR2_LEPVR RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286829|dbj|BAF50450.1| ribosomal protein S2 [Lepidium virginicum] Length = 236 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ +LK L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGFNRLPKRDAAVLKRQLSRLKTYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAIGEGRS 230 >gi|139389253|ref|YP_001123019.1| ribosomal protein S2 [Aethionema grandiflorum] gi|209573632|sp|A4QJI8|RR2_AETGR RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286215|dbj|BAF49843.1| ribosomal protein S2 [Aethionema grandiflorum] Length = 236 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL Sbjct: 67 RGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGLNRLPKRDAAVLKRQFSHLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|301155644|emb|CBW15112.1| 30S ribosomal subunit protein S2 [Haemophilus parainfluenzae T3T1] Length = 240 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 104/241 (43%), Positives = 156/241 (64%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK A + V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAAQEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L Sbjct: 121 SQDGTFDKLTKKEALMRTREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS VD+VIPGNDD++R+I L+ A+A +G + + + + + Sbjct: 181 IPVFAIVDTNSTSAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADA 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|159901472|ref|YP_001547719.1| 30S ribosomal protein S2 [Herpetosiphon aurantiacus ATCC 23779] gi|209573654|sp|A9B458|RS2_HERA2 RecName: Full=30S ribosomal protein S2 gi|159894511|gb|ABX07591.1| ribosomal protein S2 [Herpetosiphon aurantiacus ATCC 23779] Length = 255 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 110/244 (45%), Positives = 153/244 (62%), Gaps = 1/244 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++ LLE+GV FGH+ WNPKM +IF +RN HIIDL QTV LQ A + ++D VA Sbjct: 10 VSLKALLEAGVHFGHQTKRWNPKMRPFIFTDRNGIHIIDLQQTVTSLQSAYRFVADAVAG 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 GG++LFV TK QA + V + A RS Q V +W+GG++TN+ T+ + +Q L DLE + Sbjct: 70 GGKVLFVGTKKQAQEAVRDEATRSNQLYVTQRWMGGLLTNFSTIKRRLQFLHDLEARRDR 129 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E TK E L +E + KL R GI+ M LP MFV+D ++E LAI EA++L IP+ Sbjct: 130 GEFNLVTKAEALKLEDEIVKLNRVFGGIKTMERLPAAMFVIDPHKETLAISEAKKLGIPV 189 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN +PD +DY IP NDD+ R+I L +A AA++G R+ S + A +T Sbjct: 190 VAMVDTNCDPDPIDYPIPSNDDAIRAIRLMAGKIADAALEGQNRRQSQHIEERALAEQTK 249 Query: 245 VHSK 248 Sbjct: 250 YEED 253 >gi|84623524|ref|YP_450896.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879150|ref|YP_200616.6| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC10331] gi|166712731|ref|ZP_02243938.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzicola BLS256] gi|123766594|sp|Q2P4A5|RS2_XANOM RecName: Full=30S ribosomal protein S2 gi|209574091|sp|Q5H1E0|RS2_XANOR RecName: Full=30S ribosomal protein S2 gi|84367464|dbj|BAE68622.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 267 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 105/277 (37%), Positives = 162/277 (58%), Gaps = 12/277 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +PQ T+RQ+LE+GV FGH+ W+P M +YIF R HII+L +TVP+ A+ +S Sbjct: 1 MPQVTMRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G ILF+ TK A + E A+R + +WLGG +TN++TV QS+ +L++LE Sbjct: 61 AQKRGTILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K E L++ R+R+KL +L GI++M LPD +FV+D E +AI+EA++L Sbjct: 121 ETDGTFDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++AVVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A + Sbjct: 181 IPVIAVVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA----------APN 230 Query: 242 ETVVHSKE-GMQLEEDSQSSESSVLDGQEVAVVPELM 277 V +E + ++ + + G++ A P Sbjct: 231 SASVREEEFSAESADEGKGRRAPAKKGEKKADAPAAE 267 >gi|39573642|dbj|BAD04072.1| ribosomal protein subunit 2 [Cistanche deserticola] Length = 245 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPKMALYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTEMRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 MGRFNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGR 229 >gi|148245100|ref|YP_001219794.1| 30S ribosomal protein S2 [Candidatus Vesicomyosocius okutanii HA] gi|146326927|dbj|BAF62070.1| 30S ribosomal protein S2 [Candidatus Vesicomyosocius okutanii HA] Length = 261 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 109/254 (42%), Positives = 164/254 (64%), Gaps = 1/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++++LE+GV FGHR W+PKM+R+I+ RN HII+L +T+PM L I+ T Sbjct: 1 MAKTSMKKMLETGVHFGHRARFWHPKMKRFIYGTRNGIHIINLEKTLPMFNDVLNFINKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ILFV TK AS+ + + A R VN +WLGGMMTN+KT+ SI++L+DLE L Sbjct: 61 VKAGRSILFVGTKRAASNIIKQEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLEFL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + F KKE L ++R+ KL+R+L GI+D+G +PD++FV+DT EK A+ EA++L + Sbjct: 121 AEENFNQFGKKEALIMKREMKKLERSLGGIKDLGSIPDVVFVIDTGIEKNAVAEAKKLHL 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK-SAG 241 PI+ +VDTN NP+ +DYVIPGNDDS R+I + +A+ ++ A S + Sbjct: 181 PIIGIVDTNHNPEGIDYVIPGNDDSIRAIGFYAREIANTILETKATYSSPINKKVSVKKS 240 Query: 242 ETVVHSKEGMQLEE 255 ET + +E+ Sbjct: 241 ETQKPKIKKAPVEQ 254 >gi|254804090|ref|YP_003082311.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha14] gi|254667632|emb|CBA03428.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha14] gi|319409593|emb|CBY89890.1| 30S ribosomal protein S2 [Neisseria meningitidis WUE 2594] Length = 253 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 12 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRL 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 72 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 132 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 192 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 238 >gi|88706583|ref|ZP_01104286.1| 30S ribosomal protein S2 [Congregibacter litoralis KT71] gi|88699079|gb|EAQ96195.1| 30S ribosomal protein S2 [Congregibacter litoralis KT71] Length = 265 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 109/229 (47%), Positives = 151/229 (65%), Gaps = 1/229 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM++YIF +RN HII+L TVP +AL ++ Sbjct: 1 MRDLLQAGAHFGHQTRYWNPKMDQYIFGDRNKIHIINLEYTVPAFNEALDMVKRLSGSKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +ILFV TK A + E A+R+ V+ +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 KILFVGTKRAAGKIMKEQAERAGMPYVSHRWLGGMLTNYKTIRASIKRLRELEAQQSDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R+ +KL+R++ GI+DMGGLPD +FVVD + E++AI EA +L IP++ Sbjct: 121 FAALTKKEALMRARQMEKLERSIGGIKDMGGLPDALFVVDVDHERIAITEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 VVDTNS+PD VDYVIPGNDD+ R+I L+ VA A I G + A Sbjct: 181 VVDTNSDPDGVDYVIPGNDDAIRAIKLYVTAVADACIAGKVEAGGAVPA 229 >gi|294671363|ref|ZP_06736213.1| hypothetical protein NEIELOOT_03071 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306911|gb|EFE48154.1| hypothetical protein NEIELOOT_03071 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 238 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 160/222 (72%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ LWNPKM +YIF RN HII+L +T+P+ +A + + VA G Sbjct: 1 MRQMLEAGVHFGHQTRLWNPKMAQYIFGSRNKIHIINLEKTLPLFLEAQEAVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + + E A+R+ V+ +WLGGM+TN+KTV QSI++L + +L N E Sbjct: 61 NILFVGTKRQAREIIREEAERAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKTAVLANAE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 G++KKE L++ R+ +KL+R+L GI++M GLPD +FV+DT + + EA +L IP++A Sbjct: 121 TSGYSKKELLDMTREVEKLERSLGGIKNMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 VVDTN++P+ V +VIPGNDDS+++I L+C +A A ++G + Sbjct: 181 VVDTNNSPEGVKHVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 222 >gi|14278531|pdb|1I94|B Chain B, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 gi|14278552|pdb|1I95|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine gi|14278573|pdb|1I96|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) gi|14278595|pdb|1I97|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Tetracycline gi|226887630|pdb|2ZM6|B Chain B, Crystal Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Length = 255 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 110/259 (42%), Positives = 158/259 (61%), Gaps = 7/259 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D Sbjct: 3 EITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAM 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L Sbjct: 63 RGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFA 122 Query: 125 K-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP Sbjct: 123 SPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A+ DT+S+PDLVDY+IPGNDD+ RSI L I + G S Sbjct: 183 VIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLII------QARGGVVEPSPSYA 236 Query: 244 VVHSKEGMQLEEDSQSSES 262 +V E + E E+ Sbjct: 237 LVQEAEATETPEGESEVEA 255 >gi|33152638|ref|NP_873991.1| 30S ribosomal protein S2 [Haemophilus ducreyi 35000HP] gi|61215715|sp|Q7VL79|RS2_HAEDU RecName: Full=30S ribosomal protein S2 gi|33148862|gb|AAP96380.1| 30S ribosomal protein S2 [Haemophilus ducreyi 35000HP] Length = 238 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 106/241 (43%), Positives = 160/241 (66%), Gaps = 4/241 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 SSNNGKVLFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD ++Y+IPGNDD++R+I L+ D ++A +G + S + A+ + Sbjct: 181 IPVFAIVDTNSTPDGINYIIPGNDDATRAIQLYLDAASAAVKEG---RGSNVEAELQIPA 237 Query: 242 E 242 E Sbjct: 238 E 238 >gi|299830354|ref|YP_003734569.1| ribosomal protein S2 [Kryptoperidinium foliaceum] gi|297385056|gb|ADI40354.1| ribosomal protein S2 [Kryptoperidinium foliaceum] Length = 229 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 93/227 (40%), Positives = 143/227 (62%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ + WNPKM YI+ E NN HI+DL QT +L+ A + Sbjct: 1 MSDISLSQLLEAGVHFGHKAYRWNPKMFPYIYSEVNNIHILDLIQTATLLKAANNYLESA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + LF+ TK QA+ + + AKR Y VN +WLGGM+TNW T+ I++L+DLE+ Sbjct: 61 ASEEKTFLFIGTKRQATTLIAQEAKRCNSYYVNHRWLGGMLTNWSTIKDRIKRLKDLEKQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE ++ KL++ LDGI+ + +PD+ ++D RE A+ E R+L Sbjct: 121 EADGTFELLTKKEVAIRRKELSKLRKHLDGIKSLKDIPDVAIIIDQKREMTAVLECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPI++++DTN +P+LVD IPGNDD+ RSI L + + + + G ++ Sbjct: 181 IPIISILDTNCDPELVDIPIPGNDDAVRSIKLILNSLTDSILRGQSQ 227 >gi|114329645|ref|YP_740464.1| ribosomal protein S2 [Citrus sinensis] gi|122166194|sp|Q09MI9|RR2_CITSI RecName: Full=30S ribosomal protein S2, chloroplastic gi|113952611|gb|ABI49009.1| ribosomal protein S2 [Citrus sinensis] Length = 236 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+G+ FGH WNP+M YI + HI +L++T L +A ++ D + Sbjct: 7 NIHLEEMMEAGIHFGHGTRKWNPRMAPYISAKHKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVARAAIRARCHYVNQKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M +PD++ VVD E A++E L IP Sbjct: 127 GGRLDSLPKRDAAILKRQLSRLQTYLGGIKYMTRVPDIVIVVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|46198817|ref|YP_004484.1| 30S ribosomal protein S2 [Thermus thermophilus HB27] gi|55980830|ref|YP_144127.1| 30S ribosomal protein S2 [Thermus thermophilus HB8] gi|24212665|sp|P80371|RS2_THET8 RecName: Full=30S ribosomal protein S2 gi|50401226|sp|P62662|RS2_THET2 RecName: Full=30S ribosomal protein S2 gi|10835586|pdb|1FJG|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin gi|13096395|pdb|1HR0|B Chain B, Crystal Structure Of Initiation Factor If1 Bound To The 30s Ribosomal Subunit gi|13399793|pdb|1HNW|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Tetracycline gi|13399815|pdb|1HNX|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Pactamycin gi|13399837|pdb|1HNZ|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Hygromycin B gi|14278011|pdb|1GIX|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1gix, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|14278057|pdb|1IBK|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotic Paromomycin gi|14278078|pdb|1IBL|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site And With The Antibiotic Paromomycin gi|14278102|pdb|1IBM|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site gi|15826121|pdb|1JGO|E Chain E, The Path Of Messenger Rna Through The Ribosome. This File, 1jgo, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826146|pdb|1JGP|E Chain E, The Path Of Messenger Rna Through The Ribosome. This File, 1jgp, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826171|pdb|1JGQ|E Chain E, The Path Of Messenger Rna Through The Ribosome. This File, 1jgq, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|20663887|pdb|1J5E|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit gi|27065877|pdb|1N32|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position At The A Site With Paromomycin gi|27065904|pdb|1N33|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position At The A Site With Paromomycin gi|27065931|pdb|1N34|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Codon And Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position gi|27065957|pdb|1N36|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Crystallographically Disordered Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position gi|28373700|pdb|1ML5|E Chain E, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|58177401|pdb|1XMO|B Chain B, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed With Aag-Mrna In The Decoding Center gi|58177424|pdb|1XMQ|B Chain B, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The Decoding Center gi|58177465|pdb|1XNQ|B Chain B, Structure Of An Inosine-Adenine Wobble Base Pair Complex In The Context Of The Decoding Center gi|58177488|pdb|1XNR|B Chain B, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair In The Context Of The Decoding Center gi|66361055|pdb|1YL4|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. 30s Subunit. The Coordinates For The 50s Subunit Are In The Pdb Entry 1yl3 gi|88192237|pdb|2B64|B Chain B, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|88192300|pdb|2B9M|B Chain B, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400. gi|88192356|pdb|2B9O|B Chain B, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site. This File Contains The 30s Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site And Is Described In Remark 400. gi|110591324|pdb|2F4V|B Chain B, 30s Ribosome + Designer Antibiotic gi|116667655|pdb|2HHH|B Chain B, Crystal Structure Of Kasugamycin Bound To The 30s Ribosomal Subunit gi|116668198|pdb|2J00|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule I. gi|116668259|pdb|2J02|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4) This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule Ii. gi|119389713|pdb|2HGI|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgj. gi|119389770|pdb|2HGP|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgq. gi|119389826|pdb|2HGR|E Chain E, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgu. gi|149242709|pdb|2OW8|CC Chain c, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 2ow8, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsa. gi|149243619|pdb|2UU9|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gug-Codon In The A-Site And Paromomycin. gi|149243646|pdb|2UUA|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guc-Codon In The A-Site And Paromomycin. gi|149243673|pdb|2UUB|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guu-Codon In The A-Site And Paromomycin. gi|149243700|pdb|2UUC|B Chain B, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gua-Codon In The A-Site And Paromomycin. gi|149243839|pdb|2UXC|B Chain B, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Ucgu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836409|pdb|2UXB|B Chain B, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Gggu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836486|pdb|2V46|B Chain B, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 1. gi|157836542|pdb|2V48|B Chain B, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 3 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 2. gi|158430901|pdb|2UXD|B Chain B, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Cggg In The Context Of The Thermus Thermophilus 30s Subunit. gi|160285940|pdb|2QNH|CC Chain c, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 2qnh, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsp. gi|165760897|pdb|2OM7|N Chain N, Structural Basis For Interaction Of The Ribosome With The Switch Regions Of Gtp-Bound Elongation Factors gi|186972850|pdb|2VQE|B Chain B, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|186972873|pdb|2VQF|B Chain B, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|209156497|pdb|3D5A|B Chain B, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156553|pdb|3D5C|B Chain B, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938820|pdb|2JL5|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938878|pdb|2JL7|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|218766774|pdb|3F1E|B Chain B, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766830|pdb|3F1G|B Chain B, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887375|pdb|2WDG|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887400|pdb|2WDH|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|226887489|pdb|2WDK|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887546|pdb|2WDM|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|237823530|pdb|2WH1|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823589|pdb|2WH3|B Chain B, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit. gi|260099987|pdb|3HUW|B Chain B, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule I. gi|260100043|pdb|3HUY|B Chain B, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule Ii. gi|261824485|pdb|2WRI|B Chain B, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 1 Of 4). gi|261824547|pdb|2WRK|B Chain B, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 3 Of 4). gi|261824609|pdb|2WRN|B Chain B, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 1 Of 4). gi|261824668|pdb|2WRQ|B Chain B, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 3 Of 4). gi|281307168|pdb|3KIQ|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 1 Of 4) gi|281307226|pdb|3KIS|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 3 Of 4) gi|281307284|pdb|3KIU|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 1 Of 4) gi|281307342|pdb|3KIX|BB Chain b, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 3 Of 4) gi|288965605|pdb|3KNH|B Chain B, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526683|pdb|3KNJ|B Chain B, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii' gi|289526708|pdb|3KNL|B Chain B, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526733|pdb|3KNN|B Chain B, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii gi|294979505|pdb|3I8G|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979530|pdb|3I8H|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979589|pdb|3I9B|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B. The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979643|pdb|3I9D|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A. The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982076|pdb|2X9R|B Chain B, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982135|pdb|2X9T|B Chain B, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|307567963|pdb|2XFZ|B Chain B, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 1 Of 4) gi|307568021|pdb|2XG1|B Chain B, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 3 Of 4) gi|307776613|pdb|3OTO|B Chain B, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga Mutant Of Thermus Thermophilus (Hb8) gi|309320236|pdb|3OGE|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320257|pdb|3OGY|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320338|pdb|3OHC|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320359|pdb|3OHD|B Chain B, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320440|pdb|3OHY|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320491|pdb|3OI0|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320542|pdb|3OI2|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320593|pdb|3OI4|B Chain B, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207674|pdb|2XQD|B Chain B, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754000|pdb|2XSY|B Chain B, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754115|pdb|2XUY|B Chain B, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533403|pdb|2Y0U|B Chain B, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533462|pdb|2Y0W|B Chain B, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533521|pdb|2Y0Y|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533580|pdb|2Y10|B Chain B, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533639|pdb|2Y12|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533698|pdb|2Y14|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533757|pdb|2Y16|B Chain B, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533816|pdb|2Y18|B Chain B, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|13446664|emb|CAC35061.1| ribosomal protein S2 [Thermus thermophilus HB27] gi|46196440|gb|AAS80857.1| SSU ribosomal protein S2P [Thermus thermophilus HB27] gi|55772243|dbj|BAD70684.1| 30S ribosomal protein S2 [Thermus thermophilus HB8] Length = 256 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 111/262 (42%), Positives = 160/262 (61%), Gaps = 8/262 (3%) Query: 3 LP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +P + T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D Sbjct: 1 MPVEITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIED 60 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 RGG ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE Sbjct: 61 LAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEA 120 Query: 122 LLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L Sbjct: 121 LFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A+ DT+S+PDLVDY+IPGNDD+ RSI L I + G S Sbjct: 181 FIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLII------QARGGVVEPSP 234 Query: 241 GETVVHSKEGMQLEEDSQSSES 262 +V E + E E+ Sbjct: 235 SYALVQEAEATETPEGESEVEA 256 >gi|325929601|ref|ZP_08190715.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118] gi|325540111|gb|EGD11739.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118] Length = 260 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 98/260 (37%), Positives = 151/260 (58%), Gaps = 1/260 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM YIF R HII+L +TVP+ A+ +S + G Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE + Sbjct: 61 TVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L IP++A Sbjct: 121 FDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + Sbjct: 181 VVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFSAESAD 240 Query: 247 SKEGMQLEEDSQSSESSVLD 266 +G + ++ + Sbjct: 241 EGKGRRAPAKKGDKKADAAE 260 >gi|237747785|ref|ZP_04578265.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes OXCC13] gi|229379147|gb|EEO29238.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes OXCC13] Length = 246 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 104/244 (42%), Positives = 151/244 (61%), Gaps = 1/244 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HI++L +T+ M A+ I A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLAMYNDAMNYIRQLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA D + A+R+ V+ +WLGGM+TN+KT+ SI++L+D+E + Sbjct: 62 NRGTILMVGTKRQARDIIAAEAQRAGMPFVDQRWLGGMLTNFKTIKTSIKRLKDMEAAIE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +KKE L R+ +KL++++ GI+DM GLPD +FVVD K AI EA +L IP Sbjct: 122 DGSVEKMSKKEGLMFSREVEKLQKSIGGIKDMNGLPDAIFVVDVGYHKGAITEAAKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ VVDTN +P+ + YVIPGNDDSS++I L+ VA A ++G A + K Sbjct: 182 VIGVVDTNHSPEGLAYVIPGNDDSSKAIQLYARGVADAILEGRANAMHDVLEAAKGEEAV 241 Query: 244 VVHS 247 S Sbjct: 242 AAES 245 >gi|28210947|ref|NP_781891.1| 30S ribosomal protein S2 [Clostridium tetani E88] gi|61215764|sp|Q895L2|RS2_CLOTE RecName: Full=30S ribosomal protein S2 gi|28203386|gb|AAO35828.1| SSU ribosomal protein S2P [Clostridium tetani E88] Length = 233 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 148/230 (64%), Gaps = 2/230 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEQAYNFIREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ++FV TK QA + + E A R + VN++WLGGM+TN+ T+ I+ L +LE++ Sbjct: 61 AAEGKDVIFVGTKKQAQEAIQEEAVRCDMHFVNNRWLGGMLTNFSTIKGRIRTLEELEQM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMG-GLPDLMFVVDTNREKLAIQEARRL 180 + + KKE + ++ + +KL++ L GI+++ MFVVD +EK AI EA+ L Sbjct: 121 EQDGTFEVLPKKEVIKLKLEEEKLEKNLGGIKNLNANNVGAMFVVDPRKEKNAISEAKIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+VA+VDTN +PD VDYVIPGNDD+ R++ L +A A I+G + Sbjct: 181 GIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITAKMADAVIEGRQGEQ 230 >gi|327399658|ref|YP_004340527.1| 30S ribosomal protein S2 [Hippea maritima DSM 10411] gi|327182287|gb|AEA34468.1| ribosomal protein S2 [Hippea maritima DSM 10411] Length = 257 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 104/227 (45%), Positives = 154/227 (67%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+++LLE+GV FGH+ WNPKM+ +IF R + HIIDL +T+ KA + + D Sbjct: 1 MSYVTMKELLEAGVHFGHQTKRWNPKMKPFIFAARKDIHIIDLQKTIVYFDKAYEFLEDV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 A+G +LFV TK Q + + EAA+ VN KWLGG++TN+ T+ +S++KL R E Sbjct: 61 AAQGKTVLFVCTKKQGKEEIKEAAQSCNMPYVNEKWLGGLLTNFATIQKSLEKLQRLEEM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + E + +TKKE+ + ++++KL++ L+GIR M LPD + ++D RE+LA++EA +L Sbjct: 121 EESGEIEAYTKKEQKILRKRKEKLQKYLNGIRQMNDLPDALLIIDVKREELAVKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPIVA+VDTN +PD +DYVIPGNDD+ RSI L +A A +G AR Sbjct: 181 IPIVALVDTNCDPDPIDYVIPGNDDAIRSIKLMSARLAEAIKNGQAR 227 >gi|225849793|ref|YP_002730027.1| 30S ribosomal protein S2 [Persephonella marina EX-H1] gi|225644933|gb|ACO03119.1| ribosomal protein S2 [Persephonella marina EX-H1] Length = 300 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 115/267 (43%), Positives = 176/267 (65%), Gaps = 7/267 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + T+R+LLE+GV FGH+ WNPKM YIF +RN HIIDL++T+P+ + A + + Sbjct: 1 MAF-EITMRELLEAGVHFGHQTRRWNPKMAPYIFTKRNGIHIIDLAKTIPLFKVAWEFVR 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D VA+G ILFV TK QA + E A R Y +N +WLGG++TN+ TV +S+ KL+ LE Sbjct: 60 DEVAKGSDILFVGTKKQAQQIIEEQATRCGAYYINERWLGGLLTNFTTVRKSVAKLKKLE 119 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + KKE + +++K++KL++ L GI+DM +PD++F+VDT RE+LA++EA++ Sbjct: 120 TMEAEGAFEILPKKEVVKLKKKKEKLEKYLKGIKDMEKIPDIIFIVDTVREELAVKEAKK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+ DTN +PD++DY IPGNDD+ ++I L +A A I+G + + S Sbjct: 180 LGIPVVAIADTNCDPDMIDYPIPGNDDAIKAINLITTKIADAVIEGKSLRES-----VGE 234 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD 266 A ET E M+ E+ +E +++ Sbjct: 235 AVETESIEAELMKKAEEEGVAEVGIVE 261 >gi|288575409|ref|ZP_05976922.2| ribosomal protein S2 [Neisseria mucosa ATCC 25996] gi|288568071|gb|EFC89631.1| ribosomal protein S2 [Neisseria mucosa ATCC 25996] Length = 242 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|222084084|ref|YP_002519537.1| ribosomal protein S2 [Keteleeria davidiana] gi|220983636|dbj|BAH11402.1| ribosomal protein S2 [Keteleeria davidiana] Length = 234 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 91/226 (40%), Positives = 131/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF ER +THII+L++T L +A + D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTERRDTHIINLAKTARSLSEACDLAFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L + TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ + Sbjct: 67 RGKQFLIIGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQD 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++RK D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRLNQLPKKEAAMLKRKLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + SA +G + + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEGRSLR 232 >gi|302038066|ref|YP_003798388.1| 30S ribosomal protein S2 [Candidatus Nitrospira defluvii] gi|300606130|emb|CBK42463.1| 30S ribosomal protein S2 [Candidatus Nitrospira defluvii] Length = 257 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 107/239 (44%), Positives = 159/239 (66%), Gaps = 1/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I++LLE+GV FGH+ WNPKM+R++F ERN +IIDL QTV ++ A DT Sbjct: 1 MGVVAIKELLEAGVHFGHQTNRWNPKMKRFLFGERNGVYIIDLQQTVERMELAYAFARDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA++ + E AKR+ Q+ +N +WLGGM+TN++T+ +SI K++ +E Sbjct: 61 VAAGDSVLFVGTKRQAAEILEEEAKRANQFYINQRWLGGMLTNFQTIRRSIDKMKKMETT 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + +QG TKKE ++++ KL++ L GIR+M LP +F++DT E +AI EA RL Sbjct: 121 LADPTHQGHTKKELGQMQKEVVKLQKNLSGIRNMRALPGAVFILDTRIEHIAILEASRLE 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A+VD+N +PD + Y IPGNDD+ RSI L +A A ++G + + SA Sbjct: 181 IPVIAIVDSNCDPDHIQYPIPGNDDAIRSIKLIISRIADACLEGAHLRTQQEETEFASA 239 >gi|193214248|ref|YP_001995447.1| 30S ribosomal protein S2 [Chloroherpeton thalassium ATCC 35110] gi|238692699|sp|B3QV46|RS2_CHLT3 RecName: Full=30S ribosomal protein S2 gi|193087725|gb|ACF13000.1| ribosomal protein S2 [Chloroherpeton thalassium ATCC 35110] Length = 250 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 107/254 (42%), Positives = 148/254 (58%), Gaps = 5/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LL+SG FGH W PKM+ YIF E+N HIIDL +TV + AL + Sbjct: 1 MAQLKLEDLLKSGAHFGHLTRRWCPKMKPYIFMEKNGIHIIDLKKTVSLADDALNAVGAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA V E A+R+ V +WLGGM+TN+ T+ QSI++L +E + Sbjct: 61 ASTGKEILFVGTKKQAKAIVAEQAERAGMPYVAERWLGGMLTNFSTIRQSIRRLNSIERM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ TKKERL + R+++KL R L GI M LP +F++D +E +A++EA L Sbjct: 121 EIDGTFDMITKKERLMLMREKEKLVRVLGGISKMTRLPAAIFLIDVKKEHIAVREAYSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTN +P+ +DYVIP NDD+ RSI L VA A ID A Q D +A Sbjct: 181 IPIFAIVDTNCDPEFIDYVIPANDDAIRSIELITSSVADAIIDATAVQKD----DEDAAA 236 Query: 242 ETVVHSKEGMQLEE 255 + + + E Sbjct: 237 TNLASEAQDEKSEA 250 >gi|17129598|dbj|BAB72237.1| ribosomal protein subunit 2 [Cistanche salsa] Length = 245 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 1/228 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NIDLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGTHITNLTRTARFLSEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK++A+ V AA ++ + VN KWLGGM+TNW T + K RDL Sbjct: 67 RGKQFLIVGTKNKAAGSVARAAIKARCHFVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 IGRFNRLSKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 + ++DTN +PDL D IP NDD+ SI L + + A +G + S Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRSSYSS 234 >gi|22711971|ref|NP_683777.1| ribosomal protein S2 [Chaetosphaeridium globosum] gi|25009140|sp|Q8MA09|RR2_CHAGL RecName: Full=30S ribosomal protein S2, chloroplastic gi|22416975|gb|AAM96575.1| ribosomal protein S2 [Chaetosphaeridium globosum] Length = 236 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 92/224 (41%), Positives = 135/224 (60%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++E+GV GH+ WNPKM YIF ER HII+L+QT L +A ++ +T Sbjct: 5 NINLEDMMEAGVYLGHQARKWNPKMAPYIFAERKGIHIINLTQTARFLTEACDLLFNTAK 64 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G + L V TK QA+D V AK+S + VN KWLGGM+TNW T+ + ++KL++LE L + Sbjct: 65 NGEQFLIVGTKYQAADLVALTAKKSRCHYVNQKWLGGMLTNWTTIKKRLKKLQELESLES 124 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KKE N++R+ +L++ L GIR M LPD++ ++D E A++E L IP Sbjct: 125 INGFDRFPKKEASNLKRQLAQLRKYLGGIRHMTKLPDIVIIIDQQHELTALKECLILGIP 184 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + VDT+ +PDL D IP NDDS SI + + ++ +G A Sbjct: 185 TICFVDTDCDPDLTDIPIPANDDSRASIQWILNKLTNSIREGRA 228 >gi|183217731|ref|YP_001837350.1| ribosomal protein S2 [Guizotia abyssinica] gi|209573604|sp|B2LMI3|RR2_GUIAB RecName: Full=30S ribosomal protein S2, chloroplastic gi|179366246|gb|ACB86517.1| ribosomal protein S2 [Guizotia abyssinica] Length = 236 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E +QE L IP Sbjct: 127 TGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTPLQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP ND S SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPSNDYSISSIRLILNKLVFAICEGRS 230 >gi|261378607|ref|ZP_05983180.1| ribosomal protein S2 [Neisseria cinerea ATCC 14685] gi|269144940|gb|EEZ71358.1| ribosomal protein S2 [Neisseria cinerea ATCC 14685] Length = 242 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|225848032|ref|YP_002728195.1| 30S ribosomal protein S2 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644482|gb|ACN99532.1| ribosomal protein S2 [Sulfurihydrogenibium azorense Az-Fu1] Length = 288 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 114/284 (40%), Positives = 170/284 (59%), Gaps = 26/284 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++R+LLE+GV FGH+ WNPKM+ YI+ +RN HIIDLS++VP+ ++A+ I + VA Sbjct: 4 EISMRELLEAGVHFGHQVRRWNPKMKPYIYTKRNGIHIIDLSKSVPLFKQAIDFIINEVA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 G ILF+ TK QA + E A+R Y VN +WLGGM TN++TV +SI KLR L+++ Sbjct: 64 NGAEILFLGTKKQAQAIIEEQAQRCGAYYVNYRWLGGMFTNFQTVRKSIAKLRKLQKMEA 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE + ++++++KL++ L GI DM +PD++FVVDT RE LA+ EA +L + Sbjct: 124 EGAFEILPKKEVMKLKKQKEKLEKYLKGIVDMNRVPDIIFVVDTVREDLAVTEANKLGVT 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS------------ 231 +VA+ DTN +PD +DY IPGNDD+ ++I+L +A A I+G + S Sbjct: 184 VVAIADTNCDPDKIDYPIPGNDDAIKAISLITSKIADAVIEGKKMRESLGTAVETKTIEE 243 Query: 232 -------------YMGADTKSAGETVVHSKEGMQLEEDSQSSES 262 YMGA S E + E E ++ E Sbjct: 244 ELLAKEAEIVESGYMGAKNYSKEERLAEIVEKEAKESVEEAKEE 287 >gi|270307750|ref|YP_003329808.1| ribosomal protein S2 [Dehalococcoides sp. VS] gi|270153642|gb|ACZ61480.1| ribosomal protein S2 [Dehalococcoides sp. VS] Length = 245 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 100/247 (40%), Positives = 154/247 (62%), Gaps = 4/247 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LLE+G FGH+ W+P+M++YIF +RN HIIDL +TV ML KA I+ Sbjct: 1 MPTTNIKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 V+ GG++LFV TK QA + + E AKR Y +N +W GG++TN+ ++ I L R ++ Sbjct: 61 VSDGGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +L R + G ++M LPD++FVVD +EK+A+ EA+R+ Sbjct: 121 QARGDFNRLPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKIAMAEAKRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P+VA+VDTN NPD VDY IP NDD+ R+I L C +A + I+ Q++ + ++ G Sbjct: 181 VPLVAMVDTNCNPDEVDYPIPSNDDAMRAIKLICSKMADSVIEA---QNALKVTEVETTG 237 Query: 242 ETVVHSK 248 E + Sbjct: 238 EAQAETA 244 >gi|139388083|ref|YP_001123275.1| ribosomal protein S2 [Barbarea verna] gi|209573637|sp|A4QK94|RR2_BARVE RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286474|dbj|BAF50099.1| ribosomal protein S2 [Barbarea verna] Length = 236 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RD E Sbjct: 67 KGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ +LK L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGFNRLPKRDAAVLKRQLSRLKTYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCNPDLADISIPANDDAIASIRFTLNKLVFAICEGRS 230 >gi|69216177|gb|AAZ03905.1| ribosomal protein S2 [Typha latifolia] Length = 235 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKSFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMLTNWSTTETRLSKFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGKLNRLPKRDAAMLKRKLYTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|240949046|ref|ZP_04753398.1| 30S ribosomal protein S2 [Actinobacillus minor NM305] gi|240296559|gb|EER47182.1| 30S ribosomal protein S2 [Actinobacillus minor NM305] Length = 236 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 108/241 (44%), Positives = 157/241 (65%), Gaps = 6/241 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G++LFV TK ASD V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKVLFVGTKRAASDAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS PD V+Y+IPGNDD++R+I L+ D +A +G + + A Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEGKG-----ANVEAELAA 235 Query: 242 E 242 E Sbjct: 236 E 236 >gi|225077475|ref|ZP_03720674.1| hypothetical protein NEIFLAOT_02538 [Neisseria flavescens NRL30031/H210] gi|224951186|gb|EEG32395.1| hypothetical protein NEIFLAOT_02538 [Neisseria flavescens NRL30031/H210] gi|254673471|emb|CBA08858.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha275] Length = 253 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 12 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 72 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 132 LENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 192 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 238 >gi|308390199|gb|ADO32519.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha710] Length = 242 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + Sbjct: 1 MSLITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|289065078|ref|YP_003433964.1| ribosomal protein S2 [Typha latifolia] gi|281371761|gb|ADA63688.1| ribosomal protein S2 [Typha latifolia] Length = 236 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKSFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMLTNWSTTETRLSKFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGKLNRLPKRDAAMLKRKLYTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|221194635|ref|ZP_03567692.1| ribosomal protein S2 [Atopobium rimae ATCC 49626] gi|221185539|gb|EEE17929.1| ribosomal protein S2 [Atopobium rimae ATCC 49626] Length = 251 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 105/231 (45%), Positives = 154/231 (66%), Gaps = 2/231 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + TI+ LL++G +GH+ WNPKM+ YIF +RN +IIDL QT+ KA + Sbjct: 1 MA-AKITIQTLLDAGCHYGHQTRRWNPKMKPYIFGDRNGIYIIDLKQTMLGADKAYTFLK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D ++GG ILFV TK QA + V AKR+ ++ +WLGGM+TN+ T+ IQ++ +LE Sbjct: 60 DLASKGGTILFVGTKKQAQEPVATQAKRANAPYIDQRWLGGMLTNFVTMRSRIQRMEELE 119 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + + KKE+ ++ KLK L G+RDM LPD +FV+D+ RE+ AI+EA R Sbjct: 120 AMVEDGRMEALPKKEQALRNKELAKLKLNLGGVRDMNKLPDALFVIDSKREENAIREANR 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 L IP+V+++DTNS+PD+VDY IP NDD+ RSI+L C+L A A + G ++ Sbjct: 180 LHIPVVSLLDTNSDPDVVDYGIPANDDAIRSISLMCELAADAILAGSGKEQ 230 >gi|313673375|ref|YP_004051486.1| SSU ribosomal protein s2p [Calditerrivibrio nitroreducens DSM 19672] gi|312940131|gb|ADR19323.1| SSU ribosomal protein S2P [Calditerrivibrio nitroreducens DSM 19672] Length = 267 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 153/240 (63%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ LLE+GV FGH+ WNPKM +Y+F +RN +IIDL +TV +A + D Sbjct: 1 MSHISMKSLLEAGVHFGHQTKRWNPKMSKYVFGKRNGIYIIDLQKTVQCFNQAYEFARDM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + LFV TK QA + AA+R + ++++WLGG +TN++T+ I++L++LEE+ Sbjct: 61 SKQGAKFLFVGTKKQAQEATKGAAERCNSFYIHNRWLGGTLTNFETIKSRIKRLKELEEM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 F KKE I+++ DKL + L GI+DM +PD+MFV+D RE+ AI EA++L Sbjct: 121 FASGYINRFHKKEISMIKKEYDKLYKNLAGIKDMTDIPDVMFVIDIKREQNAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +P+ VD+ IPGNDD+ ++ L D +A +G + + + +SA Sbjct: 181 IPLIAIVDTNCDPEQVDFPIPGNDDAIKACQLIADRIADGINEGRQMREEDLVTEIRSAS 240 >gi|304388735|ref|ZP_07370793.1| 30S ribosomal protein S2 [Neisseria meningitidis ATCC 13091] gi|254671030|emb|CBA07848.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha153] gi|304337299|gb|EFM03475.1| 30S ribosomal protein S2 [Neisseria meningitidis ATCC 13091] Length = 253 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + I Sbjct: 12 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAIRRL 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 72 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 131 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 132 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 192 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 238 >gi|57234832|ref|YP_181123.1| 30S ribosomal protein S2 [Dehalococcoides ethenogenes 195] gi|123759724|sp|Q3Z9H6|RS2_DEHE1 RecName: Full=30S ribosomal protein S2 gi|57225280|gb|AAW40337.1| ribosomal protein S2 [Dehalococcoides ethenogenes 195] Length = 245 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 100/247 (40%), Positives = 154/247 (62%), Gaps = 4/247 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LLE+G FGH+ W+P+M++YIF +RN HIIDL +TV ML KA I+ Sbjct: 1 MPTTNIKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 V+ GG++LFV TK QA + + E AKR Y +N +W GG++TN+ ++ I L R ++ Sbjct: 61 VSEGGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +L R + G ++M LPD++FVVD +EK+A+ EA+R+ Sbjct: 121 QARGDFNRLPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKIAMAEAKRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P+VA+VDTN NPD VDY IP NDD+ R+I L C +A + I+ Q++ + ++ G Sbjct: 181 VPLVAMVDTNCNPDEVDYPIPSNDDAMRAIKLICSKMADSVIEA---QNALKVTEVETTG 237 Query: 242 ETVVHSK 248 E + Sbjct: 238 EAQAETA 244 >gi|148982222|ref|ZP_01816651.1| 30S ribosomal protein S2 [Vibrionales bacterium SWAT-3] gi|145960613|gb|EDK25965.1| 30S ribosomal protein S2 [Vibrionales bacterium SWAT-3] Length = 212 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 107/212 (50%), Positives = 152/212 (71%), Gaps = 1/212 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL I+ Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAEIAKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S Q+ VN++WLGGM+TN+KTV QSI++L++LE Sbjct: 61 GEKKGKVLFVGTKRAASEAVKEAAVNSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI++MGGLPD +FV+D + E +A++EA L Sbjct: 121 AQDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 IP+ AVVDTNSNPD VD+VIPGNDD+ R++ L Sbjct: 181 IPVYAVVDTNSNPDGVDFVIPGNDDAIRAVQL 212 >gi|161870970|ref|YP_001600150.1| 30S ribosomal protein S2 [Neisseria meningitidis 053442] gi|189044946|sp|A9M489|RS2_NEIM0 RecName: Full=30S ribosomal protein S2 gi|161596523|gb|ABX74183.1| 30S ribosomal protein S2 [Neisseria meningitidis 053442] Length = 242 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 158/227 (69%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + E +L Sbjct: 121 LENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVETEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|124267168|ref|YP_001021172.1| SSU ribosomal protein S2P [Methylibium petroleiphilum PM1] gi|124259943|gb|ABM94937.1| SSU ribosomal protein S2P [Methylibium petroleiphilum PM1] Length = 240 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 103/240 (42%), Positives = 156/240 (65%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+GV FGH+ WNPKM +IF RN HII+L +T+P+ +A++ A+ G IL Sbjct: 1 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPLFNEAMKFTRSLAAKRGTIL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V TK QA + V + A+R+ V+ +WLGGM+TN+KTV S++KL++++ + Sbjct: 61 MVGTKRQAREVVAQEAQRAGMPYVDQRWLGGMLTNFKTVKGSLKKLKEMQAQQEAGLESM 120 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 +KKE L R+ KL++ + GI+DM LPD MFV+D K+AI EA++L IP++ VVD+ Sbjct: 121 SKKEALLFAREIAKLEKDIGGIQDMNALPDAMFVIDVGYHKIAIAEAKKLGIPVIGVVDS 180 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEG 250 N +P+ +DYVIPGNDDS++++AL+ VA AA++G A + + A +S E V S Sbjct: 181 NHSPEGIDYVIPGNDDSAKAVALYARAVADAALEGKANAVNEVVAAAQSTDEFVEVSDAA 240 >gi|114804254|ref|YP_762250.1| ribosomal protein S2 [Morus indica] gi|122166816|sp|Q09X28|RR2_MORIN RecName: Full=30S ribosomal protein S2, chloroplastic gi|78100306|gb|ABB20947.1| ribosomal protein S2 [Morus indica] Length = 236 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 131/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++G+ FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMDAGIHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V +AA ++ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAQAAIKARCHYVNKKWLGGMLTNWYTTETRLHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A+QE LRIP Sbjct: 127 TGRLKRLPKRDAAVLKRQISHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALQECITLRIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|298370349|ref|ZP_06981665.1| ribosomal protein S2 [Neisseria sp. oral taxon 014 str. F0314] gi|298281809|gb|EFI23298.1| ribosomal protein S2 [Neisseria sp. oral taxon 014 str. F0314] Length = 242 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+RQ++E+GV FGH+ WNPKME+YIF RN HI++L +T+PM +A + + Sbjct: 1 MSQITMRQMIEAGVHFGHQTRFWNPKMEQYIFGARNKIHIVNLEKTLPMFLEAQEAVRRL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 VA G +LFV TK QA + + E A R+ V+ +WLGGM+TN+KTV QSI++L + Sbjct: 61 VANKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAA 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L N GF KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L Sbjct: 121 LENAAESGFGKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP++AVVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 IPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 227 >gi|225544113|ref|YP_002720101.1| rps2 [Jatropha curcas] gi|224979554|gb|ACN72681.1| rps2 [Jatropha curcas] Length = 236 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMIKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 R + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RD E Sbjct: 67 RRKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K + ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGRLNRLPKGDAARLKRQLAHLQTYLGGIKYMTGLPDVVIIVDQQEEHTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|257126433|ref|YP_003164547.1| 30S ribosomal protein S2 [Leptotrichia buccalis C-1013-b] gi|257050372|gb|ACV39556.1| ribosomal protein S2 [Leptotrichia buccalis C-1013-b] Length = 261 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 153/225 (68%), Gaps = 2/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ + A + + Sbjct: 1 MAVITMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLGATETAYEFVRQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+R+ + VN++WLGG++TN T+ +++L+DLEE+ Sbjct: 61 SEEGGKVLFVGTKKQAQEAIKEEAERAGGFYVNNRWLGGLLTNLNTIKTRVKRLKDLEEM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ +TKKE + ++ KL + L GI++M LP +FVVD +E LA++EA++L Sbjct: 121 DADGTLDEAYTKKEAGLLRKEMAKLSKNLGGIKEMNTLPAALFVVDIKKEFLALEEAKKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A++DTN +PDLV Y IP NDD+ RS+ LF ++A+AAI+G Sbjct: 181 GIPVIALIDTNVDPDLVTYKIPANDDAIRSVKLFAQVIANAAIEG 225 >gi|269469077|gb|EEZ80632.1| ribosomal protein S2 [uncultured SUP05 cluster bacterium] Length = 321 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 115/253 (45%), Positives = 169/253 (66%), Gaps = 4/253 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++++LE+GV FGHR+ W+PKM+RYI+ RN HII+L +T+PM L S T Sbjct: 1 MAKTSMKKMLEAGVHFGHRSRFWHPKMDRYIYGTRNGVHIINLEKTLPMFNDMLNFASKT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G ILFV TK ASD + E A R VN +WLGGMMTN+KT+ SI++L+DLE L Sbjct: 61 AAQGKSILFVGTKRAASDVMKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLEFL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + F KKE L + R+ +KL+R+L GI+D+GG+PD++F++D EK AI+EA++L + Sbjct: 121 AEENFTQFGKKEALMMTREMEKLERSLGGIKDLGGIPDVVFIIDIGHEKNAIREAQKLHL 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PI+ +VDTN NP+ +DYV+PGNDDS R+I+ + VA+A ++ A G T +A + Sbjct: 181 PIIGIVDTNHNPEGIDYVVPGNDDSIRAISYYAREVANAVLEAKA----AAGTQTSTAAK 236 Query: 243 TVVHSKEGMQLEE 255 V K + E Sbjct: 237 KVTAKKPVAKKAE 249 >gi|320527479|ref|ZP_08028660.1| ribosomal protein S2 [Solobacterium moorei F0204] gi|320132192|gb|EFW24741.1| ribosomal protein S2 [Solobacterium moorei F0204] Length = 316 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 101/260 (38%), Positives = 164/260 (63%), Gaps = 2/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R++LE+GV FGH+ WNPKM+++I+ +N +IIDL++T L+ A + Sbjct: 1 MTVVSMRKMLENGVHFGHQTRKWNPKMKQFIYTAKNGVYIIDLAKTQAKLEVAYNALKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILFV TK QA ++E A RS + +N +WLGG MTN++T+ +SI+KL ++EE+ Sbjct: 61 AEDGGKILFVGTKKQAQATILEEALRSGSFYINQRWLGGTMTNFRTIQKSIKKLLEIEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + +TKKE+ + +K+++L+ L GI+ M LPD +FVVD E A+ EAR+L Sbjct: 121 EANGQLAVYTKKEQAVLLQKKERLENFLGGIKGMKKLPDAIFVVDPLEEHNAVAEARKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A++DTN++PDLVD+ IP NDD+ RSI L ++A A ++ + ++A Sbjct: 181 IPVFALIDTNADPDLVDFPIPSNDDAVRSIKLMVSVIADAILEAKGGVLEVAHQEDETA- 239 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 E + + +E+ + E Sbjct: 240 EDITMKDVIINVEQQAAEYE 259 >gi|290487174|gb|ADD29971.1| ribosomal protein S2 [Oxalis latifolia] Length = 236 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 128/226 (56%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NIHLEEMMEAGVHFGHGTRKWNPRMAPYISTKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG R L V TK++A+D V AA R+ + VN KWLGG++TNW T + K RD E Sbjct: 67 RGKRFLIVGTKNKAADLVTRAAIRARCHYVNKKWLGGILTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L R L GI+ M GLPD++ +VD E +A++E L IP Sbjct: 127 TGRINRLPKRDAAMLKRQLSHLHRYLGGIKYMTGLPDIVIIVDQQEEYMALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSS 232 >gi|254226778|ref|ZP_04920352.1| ribosomal protein S2 [Vibrio cholerae V51] gi|125620716|gb|EAZ49076.1| ribosomal protein S2 [Vibrio cholerae V51] Length = 256 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 109/212 (51%), Positives = 152/212 (71%), Gaps = 1/212 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L +GV FGH+ WNPKM+++IF RN HII+L +TVPM +AL ++ Sbjct: 45 MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 104 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV QSI++L++LE Sbjct: 105 GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 164 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L Sbjct: 165 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 224 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L Sbjct: 225 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQL 256 >gi|242624342|ref|YP_003002260.1| 30S ribosomal protein S2 [Aureoumbra lagunensis] gi|239997450|gb|ACS36972.1| 30S ribosomal protein S2 [Aureoumbra lagunensis] Length = 225 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 95/224 (42%), Positives = 137/224 (61%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I QLLE+GV GH+ WNPKM YI+ ERN HI+DL QT +LQ+A + Sbjct: 1 MADIKIAQLLEAGVHLGHKTARWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDYVQSA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QAS+ + E A R+ + VN +W GG++TNW+TV I L LE+ Sbjct: 61 SEQGKTFLFVGTKPQASEIIKEEALRANSFYVNHRWYGGLLTNWQTVKGRINTLITLEKE 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 KKE N+ ++ KL+ L+GI++M +PD+M V+D N E AI+EA +L I Sbjct: 121 EETLFATLPKKESANLRKELTKLQTQLNGIKEMDRIPDVMIVIDQNYELTAIREAIKLNI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 PI++++D+N NPDL+D IPGNDD+ SI + ++ + + G Sbjct: 181 PIISLLDSNCNPDLIDVPIPGNDDAITSIKIILRALSDSILMGR 224 >gi|171463271|ref|YP_001797384.1| ribosomal protein S2 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|229470517|sp|B1XTU3|RS2_POLNS RecName: Full=30S ribosomal protein S2 gi|171192809|gb|ACB43770.1| ribosomal protein S2 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 249 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 103/230 (44%), Positives = 154/230 (66%), Gaps = 1/230 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+G FGH+ W+PKM +IF RN HII+L +T+PM Q AL+ A Sbjct: 2 SVTMRQMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFTKQVAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK Q+ + + E A R+ ++S+WLGG +TN+KTV S+++L+D+E Sbjct: 62 NRGTILFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMEVAKE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + ++KE L +R DKL++AL GI+D+ G+PD +FVVD K+AI EA +L IP Sbjct: 122 AGDWEKLSRKEALTNDRDLDKLQKALGGIKDLNGIPDAIFVVDVGYHKIAITEANKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 ++AVVDTN +P+ VDY+IPGNDDSS+++ L+ +A+A ++G A + Sbjct: 182 VIAVVDTNHSPEGVDYIIPGNDDSSKAVILYAHGIANAILEGKANSVQEI 231 >gi|209573688|sp|A5WCX2|RS2_PSYWF RecName: Full=30S ribosomal protein S2 Length = 262 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 111/253 (43%), Positives = 159/253 (62%), Gaps = 1/253 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A+ Sbjct: 10 MRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKNN 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK AS + E A R+ Q V+ +WLGGM+TNWKT+ QSI +L++LE+ + Sbjct: 70 KVLFVGTKRAASGVIREQALRAGQPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDGT 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TK+E L R +KL+R+L GI++MGGLPD +FVVD + E +AI+EA+ L IP++ Sbjct: 130 FAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVIG 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I G + G ++ V Sbjct: 190 IVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAGKEYAKTQAGGAAEAPAAEDVQ 249 Query: 247 SKEGMQLEEDSQS 259 ++E E DS Sbjct: 250 TEEAAAPEADSAE 262 >gi|269122999|ref|YP_003305576.1| 30S ribosomal protein S2 [Streptobacillus moniliformis DSM 12112] gi|268314325|gb|ACZ00699.1| ribosomal protein S2 [Streptobacillus moniliformis DSM 12112] Length = 257 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 98/257 (38%), Positives = 164/257 (63%), Gaps = 4/257 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE G FGH+ WNPKM+ YI+ ERN HI+DL QT+ +KA + + + Sbjct: 1 MAVISMKELLEVGAHFGHQAKRWNPKMKPYIYAERNGLHILDLQQTLVSTEKAYEFVREI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG++LFV TK QA + + E A+R + VN +WLGG++TN +T+ + ++KL++LEE+ Sbjct: 61 ASEGGKVLFVGTKKQAQEAMKEEAERCGGFYVNQRWLGGLLTNLETIKKRVKKLKELEEM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ +TKKE + ++ +KL++ + GI++M LP +FVVD +E LA++EA +L Sbjct: 121 EADGTLDEAYTKKEAAILRKEMEKLQKNVGGIKEMNTLPAALFVVDIKKEFLALEEAAKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A++D+N +PDLV Y IP NDD+ RSI LF +++ A ++ Q + Sbjct: 181 GIPVIALIDSNVDPDLVTYRIPANDDAIRSIKLFAKVISQAVVEANGGQENEYTPAELET 240 Query: 241 GETVVHS--KEGMQLEE 255 E + + E ++EE Sbjct: 241 AEVLEENFVVEKEEIEE 257 >gi|91214144|ref|YP_538766.1| ribosomal protein S2 [Glycine max] gi|122226251|sp|Q2PMT2|RR2_SOYBN RecName: Full=30S ribosomal protein S2, chloroplastic gi|83595745|gb|ABC25126.1| ribosomal protein S2 [Glycine max] Length = 236 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L +T L +A ++ D + Sbjct: 7 NIILEEMMEAGVHFGHGTRKWNPKMSPYISAKRKGIHITNLIRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G + L V TK +A+D V AA R+ + VN KWLGGM+TNW T +QK RDL Sbjct: 67 EGKQFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTETRLQKFRDLRMQQK 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F K++ ++R L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNSFPKRDAAILKRHLAHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLEIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|148652370|ref|YP_001279463.1| 30S ribosomal protein S2 [Psychrobacter sp. PRwf-1] gi|148571454|gb|ABQ93513.1| SSU ribosomal protein S2P [Psychrobacter sp. PRwf-1] Length = 284 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 111/253 (43%), Positives = 159/253 (62%), Gaps = 1/253 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A+ Sbjct: 32 MRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKNN 91 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK AS + E A R+ Q V+ +WLGGM+TNWKT+ QSI +L++LE+ + Sbjct: 92 KVLFVGTKRAASGVIREQALRAGQPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDGT 151 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TK+E L R +KL+R+L GI++MGGLPD +FVVD + E +AI+EA+ L IP++ Sbjct: 152 FAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVIG 211 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTNSNPD VDY+IP NDD+ R++ L+ +A A I G + G ++ V Sbjct: 212 IVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAGKEYAKTQAGGAAEAPAAEDVQ 271 Query: 247 SKEGMQLEEDSQS 259 ++E E DS Sbjct: 272 TEEAAAPEADSAE 284 >gi|73748222|ref|YP_307461.1| 30S ribosomal protein S2 [Dehalococcoides sp. CBDB1] gi|147669004|ref|YP_001213822.1| 30S ribosomal protein S2 [Dehalococcoides sp. BAV1] gi|289432271|ref|YP_003462144.1| ribosomal protein S2 [Dehalococcoides sp. GT] gi|123759800|sp|Q3ZZC1|RS2_DEHSC RecName: Full=30S ribosomal protein S2 gi|189044936|sp|A5FS79|RS2_DEHSB RecName: Full=30S ribosomal protein S2 gi|73659938|emb|CAI82545.1| ribosomal protein S2 [Dehalococcoides sp. CBDB1] gi|146269952|gb|ABQ16944.1| SSU ribosomal protein S2P [Dehalococcoides sp. BAV1] gi|288945991|gb|ADC73688.1| ribosomal protein S2 [Dehalococcoides sp. GT] Length = 245 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 100/247 (40%), Positives = 154/247 (62%), Gaps = 4/247 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P I++LLE+G FGH+ W+P+M++YIF +RN HIIDL +TV ML KA I+ Sbjct: 1 MPTTNIKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDLEE 121 V+ GG++LFV TK QA + + E AKR Y +N +W GG++TN+ ++ I L R ++ Sbjct: 61 VSDGGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE + + +L R + G ++M LPD++FVVD +EK+A+ EA+R+ Sbjct: 121 QARGDFSRLPKKEAQKLGEEIARLNRTMGGFKEMTRLPDVIFVVDPIKEKIAMAEAKRMG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P+VA+VDTN NPD VDY +P NDD+ R+I L C +A A I+ Q++ + ++ G Sbjct: 181 VPLVAMVDTNCNPDEVDYPVPSNDDAMRAIKLICSKMADAVIEA---QNAMKVTEVETTG 237 Query: 242 ETVVHSK 248 E + Sbjct: 238 EAQAETA 244 >gi|301165589|emb|CBW25160.1| 30S ribosomal protein S2 [Bacteriovorax marinus SJ] Length = 292 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 111/263 (42%), Positives = 163/263 (61%), Gaps = 3/263 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + I+ LL +G FGH+ WNPKM++Y+F ERN +I+DL +T+P +KA + Sbjct: 30 NELKIQDLLSAGAHFGHQTHKWNPKMKKYVFGERNGIYIVDLGKTIPAAKKAYDFLKKVS 89 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A G +LFV TK QAS+ V AA V +WLGGM+TN+KT++ S+ KLR +E++ Sbjct: 90 AEGKPVLFVGTKRQASETVRNAAISCGANHVTYRWLGGMLTNYKTITLSVDKLRKVEKMK 149 Query: 124 NKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + G TKKER IE+ KL++ L GI+DM +P +FVVD N E++A+QEA L I Sbjct: 150 ETGDFGLLTKKERSKIEKDVIKLEKNLGGIKDMRKIPGALFVVDPNAERIAVQEANVLGI 209 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI--ARQHSYMGADTKSA 240 P+VA+ DTN +PD +DYV+PGNDD+ +S++LF D ASA +G+ A++ + D K Sbjct: 210 PVVAITDTNCSPDGIDYVVPGNDDAIKSVSLFADYFASAVNEGLGQAKKTGKLSKDAKGV 269 Query: 241 GETVVHSKEGMQLEEDSQSSESS 263 +T + + + E D E Sbjct: 270 RDTSLEKEIISKYENDIDLKEEE 292 >gi|309322334|ref|YP_003934185.1| ribosomal protein S2 [Cedrus deodara] gi|228017066|gb|ACP51888.1| ribosomal protein S2 [Cedrus deodara] gi|307683260|dbj|BAJ19568.1| ribosomal protein S2 [Cedrus deodara] Length = 234 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 89/226 (39%), Positives = 129/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V GH+ WNPKM YIF R +THII+L++T +A + D Sbjct: 7 NIDLEEMMEARVHLGHKTRKWNPKMAPYIFTARRDTHIINLAKTARSSSEACDLAFDIAG 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK QA+D V AA + + VN KWLGGM+TNW T QK +DL++ + Sbjct: 67 RGKQFLIVGTKYQAADLVASAATEARCHYVNRKWLGGMLTNWSTTETRPQKFKDLKKEQD 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ D+L++ L GIR M LPD+ + + E +A+ E R L IP Sbjct: 127 TGRFNRLPKKEAAMLKRQLDQLQKYLGGIRYMTSLPDIAIITNQQEESIALGECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ +PDLVD IP NDD SI L + SA +G + + Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGIASIQLILNRSTSAICEGRSLR 232 >gi|254482811|ref|ZP_05096048.1| ribosomal protein S2 [marine gamma proteobacterium HTCC2148] gi|214036892|gb|EEB77562.1| ribosomal protein S2 [marine gamma proteobacterium HTCC2148] Length = 287 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 110/232 (47%), Positives = 151/232 (65%), Gaps = 1/232 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R LL++G FGH+ WNPKM++YIF RN HII+L TVP +AL +++ Sbjct: 1 MRDLLQAGAHFGHQTRYWNPKMDQYIFGARNKIHIINLEHTVPAFNEALDMVTRLAGNKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK A + E A+RS V+ +WLGGM+TN+KT+ SI++ RDLE + Sbjct: 61 KILFVGTKRAAGKIIKEQAERSGMPYVSHRWLGGMLTNYKTIRASIKRYRDLEAQAADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL+R++ GI+DMGGLPD +FV+D + E++AI EA +L IP++ Sbjct: 121 FERLTKKEALMRTRDMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 VVDTNSNPD VDYVIPGNDD+ R+I L+ VA A + G A A + Sbjct: 181 VVDTNSNPDGVDYVIPGNDDAIRAIKLYVAAVADACMAGKANSGEVPAAKDE 232 >gi|15616847|ref|NP_240060.1| 30S ribosomal protein S2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681601|ref|YP_002467987.1| 30S ribosomal protein S2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682158|ref|YP_002468542.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471287|ref|ZP_05635286.1| 30S ribosomal protein S2 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387053|sp|P57325|RS2_BUCAI RecName: Full=30S ribosomal protein S2 gi|254764462|sp|B8D928|RS2_BUCA5 RecName: Full=30S ribosomal protein S2 gi|254764463|sp|B8D7D2|RS2_BUCAT RecName: Full=30S ribosomal protein S2 gi|25294447|pir||B84957 30S ribosomal protein S2 [imported] - Buchnera sp. (strain APS) gi|10038911|dbj|BAB12946.1| 30S ribosomal protein S2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621891|gb|ACL30047.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624444|gb|ACL30599.1| 30S ribosomal protein S2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085972|gb|ADP66054.1| 30S ribosomal protein S2 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086546|gb|ADP66627.1| 30S ribosomal protein S2 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087667|gb|ADP67746.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 244 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 107/221 (48%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL + Sbjct: 1 MEIVSMREMLKAGVHFGHQTRYWNPKMKPFIFGIRNRVHIINLEKTLPMFHFALSELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + GRILFV TK AS + E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE E Sbjct: 61 ALKKGRILFVGTKKAASKGIKEVAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIE 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI EA L Sbjct: 121 SKDGTFSKLTKKEALIRSRELFKLENSLGGIKNMGGLPDCLFVIDAAHENIAITEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP+ ++VDTNSNPD VDY+IPGNDD+ RS+ L+ + Sbjct: 181 IPVFSIVDTNSNPDGVDYIIPGNDDAIRSVNLYLKSIMLTI 221 >gi|161486572|ref|NP_787577.2| 30S ribosomal protein S2 [Tropheryma whipplei str. Twist] gi|161501891|ref|NP_789253.2| 30S ribosomal protein S2 [Tropheryma whipplei TW08/27] Length = 281 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 115/267 (43%), Positives = 171/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P TIR LL++GV FGH WNPKM+ +I ER ++I+D+ +T+ + A+ I DT Sbjct: 1 MPLVTIRNLLDNGVHFGHTTQRWNPKMKGFILTERCGSYILDMRETIRGIVTAVDFIRDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG +LF+ TK QA + + A R Q+ + +WLGG++TN+ TVS+S+ ++++LEE Sbjct: 61 VARGGEVLFIGTKRQAQQVIFKQASRVGQHYIAHRWLGGLLTNFSTVSKSLVRMKELEEA 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ TKKE+L R+ KL+R+L GIR+M LP L++VVDTNRE +A++EAR+L I Sbjct: 121 RL-DDSVSTKKEQLIRGRELQKLRRSLGGIRNMTKLPALLWVVDTNREGIAVEEARKLGI 179 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA++D+N +PDLV + IPGNDDS RSI L +VA A G+ +H D + E Sbjct: 180 PVVAILDSNCDPDLVQFPIPGNDDSIRSIELLTGIVADAVAQGLVERHKAPQDDIEPMAE 239 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQE 269 E L+ S E+ + G + Sbjct: 240 W-----EKQLLQSGDSSGETRPISGTD 261 >gi|326316573|ref|YP_004234245.1| 30S ribosomal protein S2 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373409|gb|ADX45678.1| ribosomal protein S2 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 250 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 100/249 (40%), Positives = 158/249 (63%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA + + A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 62 NRGTILMVGTKRQAREILASEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L R+ +KL++ + GI+DM LPD +F++D K+A+ EA++L IP+ Sbjct: 122 AGLESMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 + VVD+N +P+ +DYVIPGNDDS++++AL+ +A A I+G A + + A + Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRANAVNDVVKAAAPEGSDE 241 Query: 244 VVHSKEGMQ 252 V +E Sbjct: 242 FVEVEESAA 250 >gi|217033851|ref|ZP_03439276.1| hypothetical protein HP9810_877g55 [Helicobacter pylori 98-10] gi|216943749|gb|EEC23192.1| hypothetical protein HP9810_877g55 [Helicobacter pylori 98-10] gi|261838827|gb|ACX98593.1| ribosomal protein S2 [Helicobacter pylori 51] gi|317178259|dbj|BAJ56048.1| 30S ribosomal protein S2 [Helicobacter pylori F16] Length = 264 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 YVSNE--EKEEMLAEIQKEITQGDE 264 >gi|119477102|ref|ZP_01617338.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2143] gi|119449465|gb|EAW30703.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2143] Length = 257 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 114/230 (49%), Positives = 153/230 (66%), Gaps = 1/230 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM +YIF RN HII+L TVP +AL VI Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMGQYIFGARNKIHIINLEHTVPAFNEALAVIQKLSVGKN 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +ILFV TK AS + E A RS+Q V+ +WLGGM+TN+KT+ SI++LRDLE + Sbjct: 61 KILFVGTKRAASKIMREEADRSSQPYVSHRWLGGMLTNYKTIRGSIKRLRDLEAQQADGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R +KL+R++ GI+DMGGLPD +FV+D ++E++AI+EA L IP++ Sbjct: 121 FDKLTKKEALMRTRAMEKLERSIGGIKDMGGLPDALFVIDVDQERIAIKEANSLGIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +VDTNS+PD VDYVIPGNDD+ R+I L+ VA A + G A S D Sbjct: 181 IVDTNSDPDGVDYVIPGNDDAIRAIKLYSAAVADAVLAGKAADGSVPKDD 230 >gi|289066829|ref|YP_003434347.1| ribosomal protein S2 [Vigna radiata] gi|259020016|gb|ACV90214.1| ribosomal protein S2 [Vigna radiata] Length = 236 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 1/225 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L +T L ++ ++ D + Sbjct: 7 NIILEEMMEAGVHFGHGTRKWNPKMSPYISAKRKGIHITNLIRTARFLSESCDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G + L V TK +A+D V AA R+ + VN KWLGGM+TNW T +QK RDL Sbjct: 67 GGKQFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTKTRLQKFRDLRMQQK 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 Q F KK+ ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRFQSFPKKDAALLKRQLAQLETYLGGIQYMKGLPDIVIIVDQQEEYTALRECITLEIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 + ++DTNS+PDL D IP NDD+ SI L + + A +G +R Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEGRSR 231 >gi|188036203|pdb|3BBN|B Chain B, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome Length = 231 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D + Sbjct: 3 NINLEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASS 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 63 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQT 122 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 123 AGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN NPDL D IP NDD+ SI L + A +G + Sbjct: 183 TICLIDTNCNPDLADISIPANDDAIASIRLILTKLVFAICEGRS 226 >gi|15612510|ref|NP_224163.1| 30S ribosomal protein S2 [Helicobacter pylori J99] gi|108563928|ref|YP_628244.1| 30S ribosomal protein S2 [Helicobacter pylori HPAG1] gi|210135717|ref|YP_002302156.1| 30S ribosomal protein S2 [Helicobacter pylori P12] gi|217032963|ref|ZP_03438437.1| hypothetical protein HPB128_182g17 [Helicobacter pylori B128] gi|254780086|ref|YP_003058193.1| 30S ribosomal protein S2 [Helicobacter pylori B38] gi|298737173|ref|YP_003729703.1| 30S ribosomal protein S2 [Helicobacter pylori B8] gi|308185341|ref|YP_003929474.1| 30S ribosomal protein S2 [Helicobacter pylori SJM180] gi|7388169|sp|Q9ZJ70|RS2_HELPJ RecName: Full=30S ribosomal protein S2 gi|123246861|sp|Q1CR52|RS2_HELPH RecName: Full=30S ribosomal protein S2 gi|238058197|sp|B6JP48|RS2_HELP2 RecName: Full=30S ribosomal protein S2 gi|4156073|gb|AAD07028.1| 30S RIBOSOMAL PROTEIN S2 [Helicobacter pylori J99] gi|107837701|gb|ABF85570.1| ribosomal protein S2 [Helicobacter pylori HPAG1] gi|210133685|gb|ACJ08676.1| 30S ribosomal protein S2 [Helicobacter pylori P12] gi|216945332|gb|EEC24006.1| hypothetical protein HPB128_182g17 [Helicobacter pylori B128] gi|254001999|emb|CAX30258.1| 30S ribosomal subunit protein S2 [Helicobacter pylori B38] gi|298356367|emb|CBI67239.1| small subunit ribosomal protein S2 [Helicobacter pylori B8] gi|307638219|gb|ADN80669.1| SSU ribosomal protein S2p [Helicobacter pylori 908] gi|308061261|gb|ADO03157.1| 30S ribosomal protein S2 [Helicobacter pylori SJM180] gi|317011771|gb|ADU85518.1| 30S ribosomal protein S2 [Helicobacter pylori SouthAfrica7] gi|317013351|gb|ADU83959.1| 30S ribosomal protein S2 [Helicobacter pylori Lithuania75] gi|325996813|gb|ADZ52218.1| 30S ribosomal protein S2 [Helicobacter pylori 2018] gi|325998405|gb|ADZ50613.1| 30S ribosomal protein S2 [Helicobacter pylori 2017] Length = 264 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 FVSNE--EKEEMLAEIQKEITQGAE 264 >gi|33519736|ref|NP_878568.1| 30S ribosomal protein S2 [Candidatus Blochmannia floridanus] gi|61215722|sp|Q7VRE6|RS2_BLOFL RecName: Full=30S ribosomal protein S2 gi|33504081|emb|CAD83342.1| 30S ribosomal protein S2 [Candidatus Blochmannia floridanus] Length = 231 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 96/222 (43%), Positives = 145/222 (65%), Gaps = 1/222 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+ M AL + Sbjct: 1 MKKLSMREMLQAGVHFGHQTRYWNPKMKPFIFGIRNKIHIINLDKTIVMFSNALVELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK + + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ALAKGKILFVGTKRATRESIKSTALICGQFFVNYRWLGGMLTNWKTVRQSIKRLKDLENQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L + R+ L+ +L GI++MGGLPD +F +E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEVLILNRELISLENSLGGIKNMGGLPDALFTAGAEQEHIAIKEANSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP+ ++VDTNS+PD +D++IPGNDD+ R+I L+ ++V++ Sbjct: 181 IPVFSIVDTNSDPDGIDFIIPGNDDAIRAINLYLNIVSNVIC 222 >gi|311087127|gb|ADP67207.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 244 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 107/221 (48%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R++L++GV FGH+ WNPKM+ +IF RN HII+L +T+PM AL + Sbjct: 1 MEIVSMREMLKAGVHFGHQTRYWNPKMKPFIFGIRNRVHIINLEKTLPMFHFALSELKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + GRILFV TK AS + E A Q+ VN +WLGGM+TNWKTV QSI++L+DLE E Sbjct: 61 ALKKGRILFVGTKKAASKGIKEVAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIE 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ KL+ +L GI++MGGLPD +FV+D E +AI EA L Sbjct: 121 SKDGTFSKLTKKEALIRSRELFKLENSLGGIKNMGGLPDCLFVIDAAHENIAITEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP+ ++VDTNSNPD VDY+IPGNDD+ RS+ L+ + Sbjct: 181 IPVFSIVDTNSNPDGVDYIIPGNDDAIRSVNLYLKSIMLTI 221 >gi|188528330|ref|YP_001911017.1| 30S ribosomal protein S2 [Helicobacter pylori Shi470] gi|308183693|ref|YP_003927820.1| 30S ribosomal protein S2 [Helicobacter pylori PeCan4] gi|238691957|sp|B2UVV5|RS2_HELPS RecName: Full=30S ribosomal protein S2 gi|188144570|gb|ACD48987.1| 30S ribosomal protein S2 [Helicobacter pylori Shi470] gi|297380711|gb|ADI35598.1| ribosomal protein S2 [Helicobacter pylori v225d] gi|308062820|gb|ADO04708.1| 30S ribosomal protein S2 [Helicobacter pylori Cuz20] gi|308064320|gb|ADO06207.1| 30S ribosomal protein S2 [Helicobacter pylori Sat464] gi|308065878|gb|ADO07770.1| 30S ribosomal protein S2 [Helicobacter pylori PeCan4] gi|317010230|gb|ADU80810.1| 30S ribosomal protein S2 [Helicobacter pylori India7] gi|317014972|gb|ADU82408.1| 30S ribosomal protein S2 [Helicobacter pylori Gambia94/24] gi|317179738|dbj|BAJ57526.1| 30S ribosomal protein S2 [Helicobacter pylori F30] Length = 264 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 YVSNE--EKEEMLAEIQKEITQGAE 264 >gi|290487182|gb|ADD29975.1| ribosomal protein S2 [Trochodendron aralioides] Length = 236 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL Sbjct: 67 RGKEFLIVGTKNKAADSVASAAIRARSHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGRLGRLPKRDAAMLKRQLSHLQAYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|242308929|ref|ZP_04808084.1| 30S ribosomal protein S2 [Helicobacter pullorum MIT 98-5489] gi|239524593|gb|EEQ64459.1| 30S ribosomal protein S2 [Helicobacter pullorum MIT 98-5489] Length = 267 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 106/237 (44%), Positives = 155/237 (65%), Gaps = 1/237 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPKM+++IF R N HIIDL +T+ + ++ D A Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-N 124 G I+FV TK QAS+ + + A+ VN +WLGGM+TN+ T+ +SI+KL +EE+ + Sbjct: 62 GKTIMFVGTKKQASETLKQYAESVNAPYVNYRWLGGMLTNFSTIRKSIRKLEIIEEMESS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I+RK++KL + L G+R + PD++FV+D +EK+A+ EARRL IP+ Sbjct: 122 GQIDLLTKKEKLMIQRKKEKLTQYLGGVRQLKKAPDMIFVIDAAKEKIAVAEARRLGIPV 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 VA +DTN +PD+VDY IPGNDD+ RSI LFC +A A +G A + + + Sbjct: 182 VAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEIAEAITEGRAIAGGEIPENQEEVA 238 >gi|116330588|ref|YP_800306.1| 30S ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124277|gb|ABJ75548.1| 30S Ribosomal protein S2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 289 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 105/276 (38%), Positives = 161/276 (58%), Gaps = 8/276 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ WNPKM Y+F RN HIIDL +TV ++A + + G Sbjct: 1 MKNLLETGVHFGHQTRKWNPKMAPYVFTARNGIHIIDLQKTVQKAKEAYDALKKLTSEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-- 125 ++LFV TK QA + A S + +N++W GG++TNW TV +SI +L+ LE + Sbjct: 61 KVLFVGTKKQARGAIEREALHSNMFFINNRWPGGLLTNWNTVKKSIARLKKLEAMEADNS 120 Query: 126 -ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E + TKKE L + R+ +KL++ L GI+DM +P++MFV+D +E++A++EAR+L + I Sbjct: 121 FEKEVKTKKEVLTLRRELEKLRKTLGGIKDMATIPEIMFVIDPKKEEIAVKEARKLGLKI 180 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--QHSYMGADTKSAG- 241 AVVDTN +P+L+DY IPGNDD+ R+I+LF + +++A I+G + D S Sbjct: 181 FAVVDTNCDPELIDYPIPGNDDAIRAISLFLETMSNAVIEGTGGVVEQPRFSEDLDSEAL 240 Query: 242 --ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E E + D + + V E Sbjct: 241 ALEYQGEYDESGKFIMDEDADSKKSKAEEPVIPTAE 276 >gi|160915173|ref|ZP_02077386.1| hypothetical protein EUBDOL_01181 [Eubacterium dolichum DSM 3991] gi|158432972|gb|EDP11261.1| hypothetical protein EUBDOL_01181 [Eubacterium dolichum DSM 3991] Length = 310 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 90/225 (40%), Positives = 147/225 (65%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+R+LLESGV FGH+ WNPKM+ I+ RN +II+L +T+ ++ A + + Sbjct: 1 MSVVTMRKLLESGVHFGHQTRRWNPKMKPNIYASRNGVYIINLEKTLEQIETAYAAMKEI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA V+E A RS + VN +WLGG++TN++T+ + +++L ++EE+ Sbjct: 61 AENGGKVLFVGTKKQAQATVVEEALRSGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + KKE +++++ +L+ L GI++M LP+ +FV+D E A+ EA++L Sbjct: 121 EANGTLDLYPKKEIAQVKKQKARLENFLGGIKEMKKLPNAIFVIDPKEEHNAVAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+ A+VDTN +P++VDY I NDD+ RS+ L L+A A ++ Sbjct: 181 IPVFAMVDTNCDPEMVDYPIASNDDAVRSVKLITTLMADAIVEAK 225 >gi|290487156|gb|ADD29962.1| ribosomal protein S2 [Ximenia americana] Length = 236 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NIHLEEMMEAGVHFGHGTRKWNPRMAPYISGKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++ +D V AA R+ + VN KWLGGM+TNW T + + RD E Sbjct: 67 GGKQFLIVGTKNKVADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHRFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E + +E L IP Sbjct: 127 AGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYMTFRECIALGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLATISIPANDDAIASIRLILNKLVFAICEG 228 >gi|269216058|ref|ZP_06159912.1| ribosomal protein S2 [Slackia exigua ATCC 700122] gi|269130317|gb|EEZ61395.1| ribosomal protein S2 [Slackia exigua ATCC 700122] Length = 262 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 102/225 (45%), Positives = 145/225 (64%), Gaps = 1/225 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ + I+ LL++G FGH+ WNPKM+ YIF R + +IIDL QT+ L A +S Sbjct: 4 AMTKVGIKTLLDAGAHFGHQTRRWNPKMKPYIFGHRGDIYIIDLKQTLVGLDNAYTFVSK 63 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE- 120 T ++GG ILFV TK QA + + A R VNS+WLGGM+TN+ T+ ++++ +LE Sbjct: 64 TASKGGTILFVGTKKQAQESIATQADRCGMPYVNSRWLGGMLTNFVTIRSRVKRMEELEA 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + KKE+ + ++ KL+ L+GIR+M LPD +FVVDTNRE+LAI EA+RL Sbjct: 124 KEADGTMALLPKKEQTLLRKELAKLQTNLNGIRNMAKLPDAIFVVDTNREQLAIHEAKRL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+V +DTN +PD V+Y IP NDD+ RS+ L VA A +D Sbjct: 184 GIPVVGTLDTNCDPDDVEYGIPANDDAIRSVNLLSTFVADAIVDA 228 >gi|317182761|dbj|BAJ60545.1| 30S ribosomal protein S2 [Helicobacter pylori F57] Length = 264 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKNIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 YVSNE--EKEEMLAEIQKEITQGDE 264 >gi|183601692|ref|ZP_02963062.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis HN019] gi|219683775|ref|YP_002470158.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis AD011] gi|241190809|ref|YP_002968203.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196215|ref|YP_002969770.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254764457|sp|B8DUA3|RS2_BIFA0 RecName: Full=30S ribosomal protein S2 gi|183219298|gb|EDT89939.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis HN019] gi|219621425|gb|ACL29582.1| ribosomal protein S2 [Bifidobacterium animalis subsp. lactis AD011] gi|240249201|gb|ACS46141.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250769|gb|ACS47708.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178548|gb|ADC85794.1| SSU ribosomal protein S2P [Bifidobacterium animalis subsp. lactis BB-12] gi|295793798|gb|ADG33333.1| 30S ribosomal protein S2 [Bifidobacterium animalis subsp. lactis V9] Length = 303 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 112/278 (40%), Positives = 174/278 (62%), Gaps = 3/278 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L++G+QFGH+ WNPKM++YI ERN +II+L +T+ ++ A I T Sbjct: 1 MAQITMSEMLKAGLQFGHQTRRWNPKMKQYILTERNGIYIINLFKTLDLIDVAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + AA R V+ +WLGGM+TN++TVS+ + +L++LE + Sbjct: 61 VAHNGTVLFVGTKKQAQEAIKNAATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELETM 120 Query: 123 --LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L ++R++DKL+R L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFDDVHGSGLTKKELLLLKREKDKLERQLGGIRNMTRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y IP NDD+ R I L +L A A +G+ + ++ Sbjct: 181 GIPVVAIVDTNADPEAVEYPIPANDDAIRGIELLTNLFADAVAEGLLERSGNASKSESNS 240 Query: 241 GETVVH-SKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + + KE ++ E + E++V+ EV E Sbjct: 241 EQPMAAWEKELLEKNEKATLRENAVVTENEVKKTDEEE 278 >gi|290487168|gb|ADD29968.1| ribosomal protein S2 [Gunnera manicata] Length = 236 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M LPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLQKRDAAVLKRQLSHLETYLGGIKYMTWLPDIVIIVDQQEEYTALRECVTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PD+ D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDIADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|11497513|ref|NP_054921.1| ribosomal protein S2 [Spinacia oleracea] gi|133916|sp|P08242|RR2_SPIOL RecName: Full=30S ribosomal protein S2, chloroplastic gi|7636094|emb|CAB88714.1| ribosomal protein S2 [Spinacia oleracea] Length = 236 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQT 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN NPDL D IP NDD+ SI L + A +G + Sbjct: 187 TICLIDTNCNPDLADISIPANDDAIASIRLILTKLVFAICEGRS 230 >gi|88608048|ref|YP_506812.1| ribosomal protein S2 [Neorickettsia sennetsu str. Miyayama] gi|123722735|sp|Q2GCI4|RS2_NEOSM RecName: Full=30S ribosomal protein S2 gi|88600217|gb|ABD45685.1| ribosomal protein S2 [Neorickettsia sennetsu str. Miyayama] Length = 298 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 123/277 (44%), Positives = 170/277 (61%), Gaps = 4/277 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + T++ L E G GH+ WNPKM YI+ N THI+DL +TVPML+ AL ISD Sbjct: 7 RVTVKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALNAISDVA 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A GR+LFV TK QA D + E A R QY VN +W GM TNW TVS+S++KL E+LL Sbjct: 67 ANSGRVLFVGTKMQACDIIKEEATRCGQYYVNLRWPSGMFTNWNTVSKSVKKLVHYEKLL 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E +KKERL+I RKR+++++ L G+R MGGLP+++FV+D +E +A++EA +L IP Sbjct: 127 EQEGDVLSKKERLSINRKRERIEKYLGGVRKMGGLPNIIFVIDPKKEHIAVEEAWKLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA---RQHSYMGADTKSA 240 +VAVVDTN +P + Y IPGNDDS R I +C LVA A + GI ++ D K+ Sbjct: 187 VVAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLVADAVLVGIESELQRKQSKELDDKAD 246 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + S Q + S + + Q+ V P+ Sbjct: 247 EKAAKVSHSDGQKKGASIRAGTDKAALQKRKVSPKSE 283 >gi|161784181|ref|YP_001595497.1| ribosomal protein S2 [Lemna minor] gi|209573608|sp|A9L985|RR2_LEMMI RecName: Full=30S ribosomal protein S2, chloroplastic gi|88696759|gb|ABD48484.1| ribosomal protein S2 [Lemna minor] Length = 236 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 131/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 KGKHFLIVGTKNKAADLVASAAIKARCHFVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGKLNSLPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PD+ D IP NDD+ SI L + + SA IDG + Sbjct: 187 TICLIDTNCDPDIADISIPANDDAIASIRLILNKLVSAIIDGRS 230 >gi|124302894|ref|YP_001023689.1| ribosomal protein S2 [Angiopteris evecta] gi|209573635|sp|A2T321|RR2_ANGEV RecName: Full=30S ribosomal protein S2, chloroplastic gi|110628292|gb|ABG79588.1| ribosomal protein S2 [Angiopteris evecta] Length = 238 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+G+ FGHR WNPKM YIF ER HI++L+QT L +A ++ Sbjct: 7 NINLEEMMEAGIHFGHRTQKWNPKMSPYIFTERKGVHILNLTQTARFLSEACDLVFHAAN 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G + L V TK Q SD + AA ++ + VN KWLGGM+TNW T+ +Q+ +DLE N Sbjct: 67 EGKQFLIVGTKYQVSDLIASAAIKARCHYVNQKWLGGMLTNWSTMETRLQRFQDLENKAN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K+E ++R+ +L++ L GI+ M PD++ + D ++E AI+E L IP Sbjct: 127 TGGFNRLPKREAAILKRQLSQLQKYLGGIKYMIDPPDIVIIADQHKESTAIKECINLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + VVDT+ +PDL D IP NDD+ SI + + A +G + Sbjct: 187 TICVVDTDCDPDLTDIPIPANDDARSSIRWILNKLTFAIHEGQS 230 >gi|115605011|ref|YP_784462.1| ribosomal protein S2 [Piper cenocladum] gi|122164373|sp|Q06GS1|RR2_PIPCE RecName: Full=30S ribosomal protein S2, chloroplastic gi|112253740|gb|ABI14461.1| ribosomal protein S2 [Piper cenocladum] Length = 236 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 87/222 (39%), Positives = 128/222 (57%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L + ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSETCDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TKS+A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKHFLIVGTKSKAADLVALAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 AGKLNCLPKRDAAMLKRKLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 187 TICLIDTNCDPDLSDISIPANDDAIASIRLILNKLVSALCEG 228 >gi|62149318|dbj|BAD93460.1| ribosomal protein S2 [Silene latifolia] Length = 236 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKKFLIVGTKNKAADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M LPD++ +VD +E A++E L IP Sbjct: 127 AGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTELPDIVIIVDQQKEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIQLILTKLVFAICEGRS 230 >gi|195928747|gb|ACG56053.1| ribosomal protein subunit 2 [Agalinis linifolia] Length = 218 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 126/218 (57%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEDMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFA 218 >gi|189485405|ref|YP_001956346.1| 30S ribosomal protein S2 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|238058202|sp|B1H053|RS2_UNCTG RecName: Full=30S ribosomal protein S2 gi|170287364|dbj|BAG13885.1| 30S ribosomal protein S2 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 244 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 159/240 (66%), Gaps = 1/240 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ WNPKM ++IF RN HIIDL +T+ L+K +V+ D Sbjct: 1 MANITMKALLEAGVHFGHQTRRWNPKMAKFIFGMRNKIHIIDLQKTLKELKKNYKVVRDF 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G I+FV TK QA + E A R Y V+ +WLGG +TN++T+ +SI + +++E++ Sbjct: 61 TSTGKDIIFVGTKKQARLPIKEEALRCGAYFVSERWLGGTLTNFETLKKSITRYKEIEDM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE+ IE++R KL+++L+G+++M LP LMFVVD++ E AI EAR+L Sbjct: 121 KETGVFKLLSKKEQSRIEKERIKLEKSLEGLKNMSSLPGLMFVVDSHEETTAILEARKLE 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAV DTN NPDLVDY IPGNDD+ R++ LFC ++A A ++G + K A Sbjct: 181 IPIVAVCDTNCNPDLVDYPIPGNDDAIRAVKLFCTVIADAVLEGKSIIGKQEDNKVKEAA 240 >gi|110227068|ref|YP_665547.1| ribosomal protein S2 [Populus alba] gi|134093186|ref|YP_001109488.1| ribosomal protein S2 [Populus trichocarpa] gi|122224633|sp|Q14FG8|RR2_POPAL RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573642|sp|A4GYP7|RR2_POPTR RecName: Full=30S ribosomal protein S2, chloroplastic gi|109945506|dbj|BAE97194.1| ribosomal protein S2 [Populus alba] gi|133712048|gb|ABO36691.1| 30S ribosomal protein S2 [Populus trichocarpa] Length = 236 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLKEMLETGVHFGHATRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 R + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RD E Sbjct: 67 RRKQFLIVGTKNKAADPVARAAIRARCHYVNKKWLGGLLTNWSTTEMRLQKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K + ++R+ L+ L GI+ M GLPD++ +VD E +A+QE L IP Sbjct: 127 TGGIHRLPKGDAARLKRQLFHLQTYLGGIKYMTGLPDIVIIVDQQEEYMALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLTDISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|156598337|gb|ABU85429.1| ribosomal protein S2 [Musa acuminata] Length = 235 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 88/223 (39%), Positives = 130/223 (58%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKNFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+ L GI+ M GLPD++ +VD E +A++E L IP Sbjct: 127 MGKLNRLPKRDAAMLKRKLSALQTYLGGIKYMTGLPDIVIIVDQQEEYMALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + SA +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLVLNKLVSAICEGR 229 >gi|120610503|ref|YP_970181.1| 30S ribosomal protein S2 [Acidovorax citrulli AAC00-1] gi|166225230|sp|A1TN69|RS2_ACIAC RecName: Full=30S ribosomal protein S2 gi|120588967|gb|ABM32407.1| SSU ribosomal protein S2P [Acidovorax citrulli AAC00-1] Length = 250 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 100/249 (40%), Positives = 158/249 (63%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + A Sbjct: 2 SVTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G IL V TK QA + + A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 62 NRGTILMVGTKRQARELLAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQE 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + +KKE+L R+ +KL++ + GI+DM LPD +F++D K+A+ EA++L IP+ Sbjct: 122 AGLESMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPL 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGET 243 + VVD+N +P+ +DYVIPGNDDS++++AL+ +A A I+G A + + A + Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRANAVNDVVKAAAPEGSDE 241 Query: 244 VVHSKEGMQ 252 V +E Sbjct: 242 FVEVEESAA 250 >gi|92112696|ref|YP_572624.1| SSU ribosomal protein S2P [Chromohalobacter salexigens DSM 3043] gi|123265800|sp|Q1R033|RS2_CHRSD RecName: Full=30S ribosomal protein S2 gi|91795786|gb|ABE57925.1| SSU ribosomal protein S2P [Chromohalobacter salexigens DSM 3043] Length = 246 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 119/257 (46%), Positives = 162/257 (63%), Gaps = 12/257 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +R LL++G FGH+ WNPKM +YIF RN HII+L T+P L AL VI Sbjct: 1 MAQVNMRDLLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEHTLPALNDALAVIEKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA +ILFV TK AS V E A+R+ Q VN +WLGGM+TN+KT+ SI++LR+LE + Sbjct: 61 VASNNKILFVGTKRAASKIVKEEARRAGQPFVNHRWLGGMLTNFKTIRVSIKRLRELEAM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R++DKL+R++ GI+DMGGLPD +FVVD + E++AI EA +L Sbjct: 121 HEDGTFEKLTKKEVLMATREQDKLERSVGGIKDMGGLPDALFVVDVDHERIAINEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++ VVDTNSNPD VDYVIPGNDDS R+I ++ VA + ++ Sbjct: 181 IPVIGVVDTNSNPDGVDYVIPGNDDSIRAIQIYAQAVADVCVRAK-----------DNSA 229 Query: 242 ETVVHSKEGMQLEEDSQ 258 V E + E ++ Sbjct: 230 SEFVEVTETNENEAAAE 246 >gi|195928691|gb|ACG56025.1| ribosomal protein subunit 2 [Agalinis auriculata] gi|195928693|gb|ACG56026.1| ribosomal protein subunit 2 [Agalinis auriculata] gi|195928733|gb|ACG56046.1| ribosomal protein subunit 2 [Agalinis heterophylla] gi|195928735|gb|ACG56047.1| ribosomal protein subunit 2 [Agalinis heterophylla] gi|195928751|gb|ACG56055.1| ribosomal protein subunit 2 [Agalinis navasotensis] gi|195928753|gb|ACG56056.1| ribosomal protein subunit 2 [Agalinis navasotensis] gi|195928817|gb|ACG56088.1| ribosomal protein subunit 2 [Agalinis tenuifolia] Length = 218 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 127/218 (58%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFA 218 >gi|195928739|gb|ACG56049.1| ribosomal protein subunit 2 [Agalinis homalantha] Length = 218 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 126/218 (57%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK+QA+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTKNQAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFA 218 >gi|167855468|ref|ZP_02478232.1| hypothetical protein HPS_04688 [Haemophilus parasuis 29755] gi|167853397|gb|EDS24647.1| hypothetical protein HPS_04688 [Haemophilus parasuis 29755] Length = 241 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 107/228 (46%), Positives = 153/228 (67%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ AL ++ Sbjct: 1 MAQVSMRDMLNAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNDALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK ASD V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKILFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L+ R KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALDRTRDMAKLELSLGGIKDMSGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ A+VDTN++P V+YVIPGNDD++R+I L+ D +A +G ++ Sbjct: 181 IPVFAIVDTNASPAGVNYVIPGNDDAARAIQLYLDAAVAAIKEGRGQE 228 >gi|261840230|gb|ACX99995.1| 30S ribosomal protein S2 [Helicobacter pylori 52] Length = 264 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 111/265 (41%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ +N +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYINYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 YVSNE--EKEEMLAEIQKEITQGDE 264 >gi|139390337|ref|YP_001122935.1| ribosomal protein S2 [Aethionema cordifolium] gi|209573631|sp|A4QJA4|RR2_AETCO RecName: Full=30S ribosomal protein S2, chloroplastic gi|134286130|dbj|BAF49759.1| ribosomal protein S2 [Aethionema cordifolium] Length = 236 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K RDL Sbjct: 67 RGKHFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHKFRDLRTEQK 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TEGLNRLPKRDAAVLKRQFSHLETYLGGIKYMTGLPDIVIIIDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTNSNPDL D IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNSNPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|109946900|ref|YP_664128.1| 30S ribosomal protein S2 [Helicobacter acinonychis str. Sheeba] gi|122973421|sp|Q17YZ7|RS2_HELAH RecName: Full=30S ribosomal protein S2 gi|109714121|emb|CAJ99129.1| 30S ribosomal protein S2 [Helicobacter acinonychis str. Sheeba] Length = 246 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 108/245 (44%), Positives = 159/245 (64%), Gaps = 1/245 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 241 Query: 245 VHSKE 249 S E Sbjct: 242 FVSNE 246 >gi|31616542|gb|AAP55715.1| ribosomal protein S2 [Chenopodium rubrum] Length = 236 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI + HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLYKYRDLRMEQT 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 AGRLARLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILTKLVFAICEGRS 230 >gi|94676820|ref|YP_588957.1| ribosomal protein S2 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123260523|sp|Q1LSV7|RS2_BAUCH RecName: Full=30S ribosomal protein S2 gi|94219970|gb|ABF14129.1| ribosomal protein S2 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 232 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + +GV FGH+ WNP+M+ +IF RN HII+L QT PM AL ++ Sbjct: 1 MVTVLMHDMFHAGVHFGHQTRYWNPRMKPFIFGVRNKIHIINLEQTAPMFNNALFELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R G+ILFV TK AS+ + EAA+ Q+ VN +WLGGM+TNWKTV QSI+ L++LE Sbjct: 61 ASRKGKILFVGTKRAASEAIKEAARSCDQFFVNHRWLGGMLTNWKTVRQSIKHLKELETQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE + RK +KL+++L GI+D+GGLPD +FV+D REK+A++EA L Sbjct: 121 SQDGTLDKLTKKEAIICNRKLEKLEKSLGGIKDLGGLPDALFVIDAEREKIAVKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+ AVVDTN++P+ +D++IPGNDD+ R+I L+ VA A +G + Sbjct: 181 IPVFAVVDTNTDPNGIDFIIPGNDDAIRAINLYLTAVAHAISEGHQK 227 >gi|317181240|dbj|BAJ59026.1| 30S ribosomal protein S2 [Helicobacter pylori F32] Length = 264 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 165/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + ++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENNEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 YVSNE--EKEEMLAEIQKEITQGDE 264 >gi|332674346|gb|AEE71163.1| 30S ribosomal protein S2 [Helicobacter pylori 83] Length = 292 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 30 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 89 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 90 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 149 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 150 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 209 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 210 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 269 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 270 YVSNE--EKEEMLAEIQKEITQGAE 292 >gi|15646161|ref|NP_208345.1| 30S ribosomal protein S2 [Helicobacter pylori 26695] gi|2500388|sp|P56009|RS2_HELPY RecName: Full=30S ribosomal protein S2 gi|2314737|gb|AAD08594.1| ribosomal protein S2 (rps2) [Helicobacter pylori 26695] Length = 264 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHANENSEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 YVSHE--EKEEMLAEIQKEITQGAE 264 >gi|315585942|gb|ADU40323.1| 30S ribosomal protein S2 [Helicobacter pylori 35A] Length = 292 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+ Sbjct: 30 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQ 89 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 90 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 149 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 150 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 209 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 210 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 269 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 270 YVSNE--EKEEMLAEIQKEITQGNE 292 >gi|132444673|ref|NP_904088.2| ribosomal protein S2 [Amborella trichopoda] gi|209573731|sp|Q70Y11|RR2_AMBTC RecName: Full=30S ribosomal protein S2, chloroplastic Length = 236 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 124/222 (55%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 DINLEEMMGAGVHFGHGTRKWNPRMAPYISGKRKGIHITNLTRTARPLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 67 RGKHFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E AI+E L IP Sbjct: 127 MGRFKRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDHQEEYTAIRECLTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADIPIPANDDAIASIQLILNKLVLAIREG 228 >gi|108804235|ref|YP_644172.1| 30S ribosomal protein S2P [Rubrobacter xylanophilus DSM 9941] gi|123368165|sp|Q1AW68|RS2_RUBXD RecName: Full=30S ribosomal protein S2 gi|108765478|gb|ABG04360.1| SSU ribosomal protein S2P [Rubrobacter xylanophilus DSM 9941] Length = 306 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 105/250 (42%), Positives = 149/250 (59%), Gaps = 1/250 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + IR+LLE+GV FGH+ WNPKM+RYIF ER HIIDL QT+ +L++AL I Sbjct: 3 STQSIGIRELLEAGVHFGHQAKRWNPKMKRYIFAERAGVHIIDLDQTLDLLERALNFIRG 62 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LE 120 G +LFV TK QA + E A R Q V +++GG++TN++T+ I+ + Sbjct: 63 VAEAGQDVLFVGTKKQAQITIAEQAIRCGQPYVAERYIGGLLTNFRTIRPRIEYFKQLSR 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 E+ + + KE R+ KL+R GI +M LP ++VVD RE+L ++EA RL Sbjct: 123 EVEETPEEERSGKEWFARLREYQKLRRNFAGITEMERLPGAVYVVDPKREELLVREANRL 182 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIP+VA+ DTN +PD++DYVIPGNDD+ RSI+L L+A A I+G + + A Sbjct: 183 RIPVVALTDTNCDPDVIDYVIPGNDDAIRSISLITRLIADAVIEGRGEESAAEERPVPPA 242 Query: 241 GETVVHSKEG 250 E +EG Sbjct: 243 VEEAQMVEEG 252 >gi|325282618|ref|YP_004255159.1| ribosomal protein S2 [Deinococcus proteolyticus MRP] gi|324314427|gb|ADY25542.1| ribosomal protein S2 [Deinococcus proteolyticus MRP] Length = 266 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 101/261 (38%), Positives = 157/261 (60%), Gaps = 6/261 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH WNPK R+IF ERN IIDL +T+ + ++ I D Sbjct: 1 MSYISMKQLLEAGVHFGHETKRWNPKFGRFIFGERNGIFIIDLQKTLKQVDRSFDYIKDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +GG ILFV TK QA + V A+R+ V S+WLGGM+TN++T+ +++L +L+EL Sbjct: 61 AEKGGTILFVGTKKQAQEIVELEARRTGMPFVTSRWLGGMLTNYRTIRTRVERLDELDEL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K ER+ + +RD+L+R + GIR M LPD +FV+D +E +A++EA +L Sbjct: 121 FESGRINDRPKAERVQLGTERDRLQRFVGGIRKMNRLPDAIFVIDPTKEVIAVKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+ DT+S+PD++DY++PGNDD+ RSI L + ++ D + Sbjct: 181 IPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLLVEARG-----ADEDVEQGE 235 Query: 242 ETVVHSKEGMQLEEDSQSSES 262 E V S ++ E +S E+ Sbjct: 236 ERVEESNADIEAAEAGESVEN 256 >gi|254496415|ref|ZP_05109295.1| 30S ribosomal protein S2 [Legionella drancourtii LLAP12] gi|254354362|gb|EET13017.1| 30S ribosomal protein S2 [Legionella drancourtii LLAP12] Length = 244 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 110/244 (45%), Positives = 156/244 (63%), Gaps = 9/244 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R+LLE+G FGHR WNP+M YIF RN HII+L +T+ ML + + + Sbjct: 1 MRELLEAGAHFGHRTRFWNPEMGEYIFGSRNKIHIINLEKTMVMLNDVVNYVGRLASNKA 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 +ILFV TK A + + E AKR V+ +WLGGM+TN+KTV QSI +L++L+E+ K Sbjct: 61 KILFVGTKRAAQESIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGL 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 G KKE L + R+ +KL R L GI MGGLPD +FVVD E +A++EARRL+IP++ Sbjct: 121 FDGMIKKEALMLTRELEKLDRGLGGIEHMGGLPDALFVVDVGFEHIAVEEARRLKIPVIG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--------GIARQHSYMGADTK 238 VVDTN++P+ +DYVIP NDDS R++ ++ +A A +D G++ G+D + Sbjct: 181 VVDTNNSPNNIDYVIPANDDSMRAVDIYVRCIADAILDAKNSNTVGGVSSSVEVQGSDAE 240 Query: 239 SAGE 242 AGE Sbjct: 241 KAGE 244 >gi|34481618|emb|CAD45096.2| ribosomal protein S2 [Amborella trichopoda] Length = 275 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 124/222 (55%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 46 DINLEEMMGAGVHFGHGTRKWNPRMAPYISGKRKGIHITNLTRTARPLSEACDLVFDAAS 105 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK +A+D V AA R+ + VN KWLGGM TNW T + K RDL E Sbjct: 106 RGKHFLIVGTKDKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQK 165 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD E AI+E L IP Sbjct: 166 MGRFKRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDHQEEYTAIRECLTLGIP 225 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 226 TICLIDTNCDPDLADIPIPANDDAIASIQLILNKLVLAIREG 267 >gi|89900774|ref|YP_523245.1| 30S ribosomal protein S2 [Rhodoferax ferrireducens T118] gi|123091301|sp|Q21WY9|RS2_RHOFD RecName: Full=30S ribosomal protein S2 gi|89345511|gb|ABD69714.1| SSU ribosomal protein S2P [Rhodoferax ferrireducens T118] Length = 250 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 105/245 (42%), Positives = 157/245 (64%), Gaps = 1/245 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+R++LE+GV FGH+ WNPKM +IF RN HII+L +++PM Q+A + S AR Sbjct: 3 ITMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFASQVSAR 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +L V TK QA + V A+R+ V+ +WLGGM+TN+KTV SI++L+D++ Sbjct: 63 RGTVLMVGTKRQARETVALEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKIQQEA 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +KKE+L R+ KL+R + GI+DM LPD +FV+D K+AI EA++L IP++ Sbjct: 123 GLDSLSKKEQLMFARELAKLERDIGGIQDMTVLPDAIFVIDVGFHKIAIAEAKKLGIPLI 182 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR-QHSYMGADTKSAGETV 244 AVVDTN +P+ +DY+IPGNDDSS+++ L+ +A A I+G + + A + + Sbjct: 183 AVVDTNHSPEGIDYIIPGNDDSSKAVILYARGIADAIIEGRSNAVDDVVKAVVAESSDEF 242 Query: 245 VHSKE 249 V E Sbjct: 243 VEVNE 247 >gi|195928723|gb|ACG56041.1| ribosomal protein subunit 2 [Agalinis gattingeri] gi|195928725|gb|ACG56042.1| ribosomal protein subunit 2 [Agalinis gattingeri] gi|195928727|gb|ACG56043.1| ribosomal protein subunit 2 [Agalinis gattingeri] Length = 218 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 84/218 (38%), Positives = 126/218 (57%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGIHIPNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L + T +A+D V AA ++ +CV KWLGGM+TNW T ++QK RD E Sbjct: 61 SGKQFLIIGTTKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETTLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+R L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + +VDTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLVDTNCDPDLADLPIPANDDARSSIRLILNKLVFA 218 >gi|313183982|ref|YP_004021139.1| ribosomal protein S2 [Castanea mollissima] gi|290487178|gb|ADD29973.1| ribosomal protein S2 [Quercus nigra] gi|309321509|gb|ADO65049.1| ribosomal protein S2 [Castanea mollissima] Length = 236 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+ME YI +R HII+L +T L +A ++ DT + Sbjct: 7 NIHLEEMMEAGVHFGHGTSKWNPRMEPYISSKRKGIHIINLIRTARFLSEACDLVFDTAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTETILHKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD E +A++E L IP Sbjct: 127 MGRLNRLPKRDSAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYMALRECMILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|156598145|gb|ABU85337.1| ribosomal protein S2 [Elaeis oleifera] Length = 235 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L + ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTRTARFLSETCDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKNFLIVGTKNKAVDSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGKLNCLSKRDAAMLKRKLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|207092621|ref|ZP_03240408.1| 30S ribosomal protein S2 [Helicobacter pylori HPKX_438_AG0C1] Length = 264 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 111/265 (41%), Positives = 166/265 (62%), Gaps = 3/265 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T++ LLE GV FGH+ WNPK +++IF R N +IIDL +T+ + ++ D A+ Sbjct: 2 VTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIYIIDLQKTLRYFRYTYNIVRDASAQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N Sbjct: 62 GKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENS 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPI Sbjct: 122 GQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 182 VAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIE 241 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 242 FVSNE--EKEEMLAEIQKEITQGAE 264 >gi|28476457|gb|AAO44546.1| 30S ribosomal protein S2 [Tropheryma whipplei str. Twist] Length = 308 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 116/267 (43%), Positives = 171/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP TIR LL++GV FGH WNPKM+ +I ER ++I+D+ +T+ + A+ I DT Sbjct: 28 LPLVTIRNLLDNGVHFGHTTQRWNPKMKGFILTERCGSYILDMRETIRGIVTAVDFIRDT 87 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG +LF+ TK QA + + A R Q+ + +WLGG++TN+ TVS+S+ ++++LEE Sbjct: 88 VARGGEVLFIGTKRQAQQVIFKQASRVGQHYIAHRWLGGLLTNFSTVSKSLVRMKELEEA 147 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ TKKE+L R+ KL+R+L GIR+M LP L++VVDTNRE +A++EAR+L I Sbjct: 148 RL-DDSVSTKKEQLIRGRELQKLRRSLGGIRNMTKLPALLWVVDTNREGIAVEEARKLGI 206 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA++D+N +PDLV + IPGNDDS RSI L +VA A G+ +H D + E Sbjct: 207 PVVAILDSNCDPDLVQFPIPGNDDSIRSIELLTGIVADAVAQGLVERHKAPQDDIEPMAE 266 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQE 269 E L+ S E+ + G + Sbjct: 267 W-----EKQLLQSGDSSGETRPISGTD 288 >gi|61215756|sp|Q83G71|RS2_TROWT RecName: Full=30S ribosomal protein S2 gi|61215757|sp|Q83HZ7|RS2_TROW8 RecName: Full=30S ribosomal protein S2 gi|28410605|emb|CAD66991.1| 30s ribosomal protein S2 [Tropheryma whipplei TW08/27] Length = 287 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 116/267 (43%), Positives = 171/267 (64%), Gaps = 6/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 LP TIR LL++GV FGH WNPKM+ +I ER ++I+D+ +T+ + A+ I DT Sbjct: 7 LPLVTIRNLLDNGVHFGHTTQRWNPKMKGFILTERCGSYILDMRETIRGIVTAVDFIRDT 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VARGG +LF+ TK QA + + A R Q+ + +WLGG++TN+ TVS+S+ ++++LEE Sbjct: 67 VARGGEVLFIGTKRQAQQVIFKQASRVGQHYIAHRWLGGLLTNFSTVSKSLVRMKELEEA 126 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ TKKE+L R+ KL+R+L GIR+M LP L++VVDTNRE +A++EAR+L I Sbjct: 127 RL-DDSVSTKKEQLIRGRELQKLRRSLGGIRNMTKLPALLWVVDTNREGIAVEEARKLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA++D+N +PDLV + IPGNDDS RSI L +VA A G+ +H D + E Sbjct: 186 PVVAILDSNCDPDLVQFPIPGNDDSIRSIELLTGIVADAVAQGLVERHKAPQDDIEPMAE 245 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQE 269 E L+ S E+ + G + Sbjct: 246 W-----EKQLLQSGDSSGETRPISGTD 267 >gi|160872239|ref|ZP_02062371.1| ribosomal protein S2 [Rickettsiella grylli] gi|159121038|gb|EDP46376.1| ribosomal protein S2 [Rickettsiella grylli] Length = 262 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 113/260 (43%), Positives = 163/260 (62%), Gaps = 4/260 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+RQL E+GV FGHR PKM YI+ RN IIDL +T + +AL I+ Sbjct: 3 ATATLRQLFEAGVHFGHRTCFREPKMMPYIYGVRNGISIIDLEKTREYITEALHYIAKIA 62 Query: 64 AR-GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 AR G +ILFV TK A D V E A R VN +WLGG++TN++T+ QSI++L++LE + Sbjct: 63 ARPGSKILFVGTKRAARDLVKEQALRCGMPYVNHRWLGGLLTNYRTIRQSIKRLKELELQ 122 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE LN++R+ DKL+R+L GI+DM GLPD++FV+D E +AI EA++L+ Sbjct: 123 SKDGRFNQLTKKEALNLQRQMDKLERSLGGIKDMSGLPDVLFVIDRGYEHIAICEAQKLK 182 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA- 240 IP++++VDTN +P+ +DYVIPGNDD+SR+I L+ +V+ ++ A A Sbjct: 183 IPVISIVDTNHSPEGIDYVIPGNDDASRAITLYTQMVSETILEARAEAKKRADLTRAEAE 242 Query: 241 -GETVVHSKEGMQLEEDSQS 259 GE V + + E+ Q Sbjct: 243 NGENQVPERASTKSSEEKQE 262 >gi|69216169|gb|AAZ03901.1| ribosomal protein S2 [Acorus americanus] Length = 235 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G L V TK +A+D V AA R+ + VN KWLGGM TNW T +Q RDL E Sbjct: 67 GGKHFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQNFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD + A++E L IP Sbjct: 127 AGKIDRLPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTNS+PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|254455660|ref|ZP_05069089.1| ribosomal protein S2 [Candidatus Pelagibacter sp. HTCC7211] gi|207082662|gb|EDZ60088.1| ribosomal protein S2 [Candidatus Pelagibacter sp. HTCC7211] Length = 272 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 123/271 (45%), Positives = 183/271 (67%), Gaps = 1/271 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M +P+ TI+QLLE+GV GH+ WNPKM++YIF +R++ HIIDL+QT+ + + AL+ + Sbjct: 1 MKIPEITIQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTKVALEKVY 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + +A G+ILFV+TK QAS+ + E AK + QY VN +WLGGM+TNW T+S SI+K++ E Sbjct: 61 NIIANNGKILFVSTKKQASEAIAEVAKETDQYFVNYRWLGGMLTNWGTISGSIKKMKKYE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L EN+GFTKKE L + K+DKL+R+L GI +M PDL+F++DTN E LAI E+ +L Sbjct: 121 TALAAENRGFTKKELLKMSVKKDKLERSLGGIAEMKKTPDLVFIIDTNYESLAIAESVKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A++D+NSNPD +DY IPGNDD+ R+I L+C+L+ + S S Sbjct: 181 GIPIIAILDSNSNPDNIDYPIPGNDDARRAIDLYCNLIKETINYAKSSIPSSAPITENSN 240 Query: 241 GETV-VHSKEGMQLEEDSQSSESSVLDGQEV 270 + + K +L+ + + S D +++ Sbjct: 241 NDKKDIQVKTVQELDREKLEKKFSTEDKEKL 271 >gi|75755648|ref|YP_319754.1| ribosomal protein S2 [Acorus calamus] gi|161622299|ref|YP_001586171.1| ribosomal protein S2 [Acorus americanus] gi|122227062|sp|Q3V545|RR2_ACOCL RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573630|sp|A9LYH4|RR2_ACOAM RecName: Full=30S ribosomal protein S2, chloroplastic gi|74381698|emb|CAI53783.1| ribosomal protein S2 [Acorus calamus] gi|160369842|gb|ABX38733.1| ribosomal protein S2 [Acorus americanus] Length = 236 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G L V TK +A+D V AA R+ + VN KWLGGM TNW T +Q RDL E Sbjct: 67 GGKHFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQNFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD + A++E L IP Sbjct: 127 AGKIDRLPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTNS+PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|299830559|ref|YP_003735007.1| 30S ribosomal protein S2 [Durinskia baltica] gi|297384923|gb|ADI40222.1| 30S ribosomal protein S2 [Durinskia baltica] Length = 229 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 99/227 (43%), Positives = 142/227 (62%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ WNPKM YI+ E NN HI+DL Q+ +L+ A + Sbjct: 1 MSDISLSQLLEAGVHFGHKAHRWNPKMFPYIYSEVNNIHILDLVQSATLLKSANNFVELA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + LFV TK QA+ + + AKRS Y VN +WLGGM+TNW TV + IQ+L+DLE+ Sbjct: 61 ASENKTFLFVGTKRQATTLIAQEAKRSNSYYVNHRWLGGMLTNWATVKERIQRLKDLEKQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE ++ KL++ LDGI+ M PD+ ++D RE AI E R+L Sbjct: 121 EADGTFDLLTKKEVAIRRKELSKLRKHLDGIKTMPDQPDVAIIIDQKREMTAILECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+V+++DTN +P+LVD IPGNDD+ RSI L + + + I G ++ Sbjct: 181 IPVVSILDTNCDPELVDVPIPGNDDAVRSIKLILNSLTDSIIKGQSK 227 >gi|31580890|dbj|BAC77547.1| ribosomal protein S2 [Nicotiana sylvestris] Length = 222 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HII+L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADLVEWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP Sbjct: 127 TGRLNRLPKRDAAMLKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + + DTN +PDL D IP NDD+ SI L + + Sbjct: 187 TICLTDTNCDPDLADISIPANDDAISSIRLILNKLV 222 >gi|325913955|ref|ZP_08176311.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937] gi|325539724|gb|EGD11364.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937] Length = 266 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 100/243 (41%), Positives = 150/243 (61%), Gaps = 2/243 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGHR WNPKM YIF R HII+L +TVP+ A+ +S + G Sbjct: 1 MRQMLEAGVHFGHRTCYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +LF+ TK A + + E A+R + +WLGG +TN++TV QS+ +L++LE + Sbjct: 61 TVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + K E L + R+R+KL +L GI++M LPD +FV+D E +AI+EA++L IP++A Sbjct: 121 FEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA-DTKSAGETVV 245 VVDTN +P LVDY IPGNDD+ R++ L+ A A ++G A + + + + E Sbjct: 181 VVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEEFSAEAGD 240 Query: 246 HSK 248 K Sbjct: 241 EGK 243 >gi|294786950|ref|ZP_06752204.1| ribosomal protein S2 [Parascardovia denticolens F0305] gi|315226587|ref|ZP_07868375.1| 30S ribosomal protein S2 [Parascardovia denticolens DSM 10105] gi|294485783|gb|EFG33417.1| ribosomal protein S2 [Parascardovia denticolens F0305] gi|315120719|gb|EFT83851.1| 30S ribosomal protein S2 [Parascardovia denticolens DSM 10105] Length = 278 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 110/262 (41%), Positives = 165/262 (62%), Gaps = 2/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ Q+L +GV FGH+ WNPKM++YI ERN HIIDL +++ ++ +A I DT Sbjct: 1 MAQITMSQMLNAGVHFGHQTSRWNPKMKQYILMERNGIHIIDLFKSMDLIDQAYTFIKDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + ++++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQETITAQATRVGMPYVSERWLGGMLTNFQTVSKRVARMKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFSDVHSSNLTKKELLLLEREKDKLVKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN +PD VDY IP NDD+ R + L L+A A +G+ + TKS Sbjct: 181 GIPVVALVDTNCDPDSVDYAIPANDDAIRGVELLTSLMADAVAEGLLARSDKAAKATKSN 240 Query: 241 GETVVHSKEGMQLEEDSQSSES 262 + + + ++ +E+ Sbjct: 241 EKEAAQPMAEWEKDLLTKDAEA 262 >gi|315320478|ref|YP_004072534.1| 30S ribosomal protein S2 [Thalassiosira oceanica CCMP1005] gi|283568951|gb|ADB27488.1| 30S ribosomal protein S2 [Thalassiosira oceanica CCMP1005] Length = 232 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 141/224 (62%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++GV FGH+ + WNPKM YI+ ERNN HI+DL QT +L++A ++ Sbjct: 1 MADINLAQLLKAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQTAQLLKRANSYVTKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + LF+ TK QAS + E A Y VN +WLGGM+TNW T+ I++L+ LE+ Sbjct: 61 ASNNKTFLFIGTKRQASAVIAEQANSCNAYYVNHRWLGGMLTNWVTLKSRIERLKTLEQQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ KKE ++ +KL++ L+G+++M LPD+ ++D RE A+QE R+L Sbjct: 121 EVDGVFALLPKKEASLRSKELEKLRKHLNGVKNMTRLPDVAIIIDQKREMTAVQECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IPI++++DTN +PDLVD IPGNDD+ RSI L + + +G Sbjct: 181 IPIISILDTNCDPDLVDIPIPGNDDAVRSIKLILSSLTESIKNG 224 >gi|28202152|ref|NP_777393.1| ribosomal protein S2 [Anthoceros formosae] gi|41688602|sp|Q85AW7|RR2_ANTFO RecName: Full=30S ribosomal protein S2, chloroplastic gi|27807854|dbj|BAC55329.1| ribosomal protein S2 [Anthoceros formosae] gi|27807951|dbj|BAC55420.1| ribosomal protein S2 [Anthoceros formosae] Length = 235 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 89/223 (39%), Positives = 137/223 (61%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+G+ FGH+ WNPKM+ YIF ER HI+++++T +L +A +++ + Sbjct: 7 NINLEEMMEAGIHFGHQAAKWNPKMKPYIFTERRGIHILNVTKTARLLSEACDFVANAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + L V TK QA+D V AA ++ + VN KWLGGM+TNW T+ + ++K DL+ N Sbjct: 67 KGKQFLIVGTKYQAADLVASAALKARCHYVNQKWLGGMLTNWSTIEKRLRKFEDLQTKKN 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE N+ER+ +L++ L GIR M LPD++ +VD +E AI+E L IP Sbjct: 127 MGALDELPKKEAANLERQLAQLQKYLGGIRYMTNLPDIVIIVDQQKELTAIRECINLNIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+ +PDL D IP NDD+ SI D + SA +G Sbjct: 187 TICLVDTDCDPDLTDISIPANDDARASIRWVLDKLTSAIQEGR 229 >gi|261337805|ref|ZP_05965689.1| ribosomal protein S2 [Bifidobacterium gallicum DSM 20093] gi|270277262|gb|EFA23116.1| ribosomal protein S2 [Bifidobacterium gallicum DSM 20093] Length = 333 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 115/270 (42%), Positives = 172/270 (63%), Gaps = 3/270 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ ++L +G+QFGH+ WNPKM++YI RN HIIDL +++ M+ A I T Sbjct: 1 MAQITMSEMLNAGLQFGHQTRRWNPKMKQYIITSRNGIHIIDLFKSLDMIDVAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA D + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAKDAIASQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL+R L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLERQLGGIRNMTRTPSAMFVVDINKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY-MGADTKS 239 IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ + A+ + Sbjct: 181 GIPVVAIVDTNTDPETVEYPIPANDDAIRGIELLTRLMADAVAEGLLERSGKGTKAEGDA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 A E + + E L+E++ + +V + E Sbjct: 241 AEEQPMAAWEKDLLKENAHTVSETVTEDLE 270 >gi|323148895|ref|YP_004222450.1| ribosomal protein S2 [Smilax china] gi|308742586|gb|ADO33437.1| ribosomal protein S2 [Smilax china] Length = 236 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HII+L++T L +A ++ + + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFNASS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G L V TK++A+D V AA + + VN KWLGGM+TNW T + K RDL E Sbjct: 67 GGKHFLIVGTKNKAADLVASAAIGARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGKLNRLSKRDAAMLKRKLSTLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|290487160|gb|ADD29964.1| ribosomal protein S2 [Bulnesia arborea] Length = 236 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI+++++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMGPYISAKRKGIHILNITRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + L V TK++A+D V AA +S + VN KW GGM+TNW T + K RDL Sbjct: 67 KGKQFLIVGTKTKAADLVARAAIKSRSHYVNKKWPGGMLTNWSTTETRLHKFRDLRMKQK 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGRLNRLPKRDAAMLKRKLSHLQTYLGGIQYMKGLPDIVIIVDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRFILNKLVFAICEGRS 230 >gi|94985153|ref|YP_604517.1| 30S ribosomal protein S2 [Deinococcus geothermalis DSM 11300] gi|123381930|sp|Q1IZI6|RS2_DEIGD RecName: Full=30S ribosomal protein S2 gi|94555434|gb|ABF45348.1| ribosomal protein S2 [Deinococcus geothermalis DSM 11300] Length = 264 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 102/264 (38%), Positives = 158/264 (59%), Gaps = 8/264 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D Sbjct: 1 MSYISMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQIDRSFDYIKDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RGG ILFV TK QA + V A+R+ V S+WLGGM+TN++T+ I +L +L+++ Sbjct: 61 AERGGVILFVGTKKQAQEIVELEARRTGMPYVTSRWLGGMLTNFRTIRTRIDRLNELDDM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K ER+ + +R++L R + GIR M LPD +FVVD +E +A+QEA +L Sbjct: 121 FESGRVNDRPKAERIELAAERERLLRFVGGIRKMTRLPDAIFVVDPTKEVIAVQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+ DT+S+PD++DY++PGNDD+ RSI L + ++ G +G Sbjct: 181 IPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLIVEAR-------GGGEDVSG 233 Query: 242 ETVVHSKEGMQLEEDSQSSESSVL 265 E V ++ ED + +++ L Sbjct: 234 ERVSPDNADIEAAEDGEEVDNAQL 257 >gi|118411126|ref|YP_874520.1| 30S ribosomal protein S2 [Thalassiosira pseudonana] gi|224015736|ref|XP_002297516.1| RR2, ribosomal protein 2 [Thalassiosira pseudonana CCMP1335] gi|125987744|sp|A0T0Q8|RR2_THAPS RecName: Full=30S ribosomal protein S2, chloroplastic gi|116739873|gb|ABK20743.1| 30S ribosomal protein S2 [Thalassiosira pseudonana] gi|220967780|gb|EED86156.1| RR2, ribosomal protein 2 [Thalassiosira pseudonana CCMP1335] Length = 227 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 146/227 (64%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++GV FGH+ + WNPKM YI+ ERNN HI+DL QT +L++A + + Sbjct: 1 MADINLAQLLDAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQTAQLLKRANAYVQNA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + G LFV TK QAS + + AKR + Y VN +WLGGM+TNW T+ I++L+ LE+ Sbjct: 61 ASEGKTFLFVGTKRQASAVIAQEAKRCPSGYYVNHRWLGGMLTNWVTLKSRIERLKTLEQ 120 Query: 122 L-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + KKE ++ +KL++ L+G++DM LPD+ ++D RE AIQE R+L Sbjct: 121 QEVEGVFNLLPKKEASLRAKELEKLRKHLNGVKDMSKLPDVAIIIDQKREMTAIQECRKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+++++DTN +PDLVD IPGNDD+ RSI L + + ++ + G Sbjct: 181 GIPVISILDTNCDPDLVDIPIPGNDDAVRSIKLILNSLTNSIVQGCQ 227 >gi|108796848|ref|YP_636395.1| ribosomal protein S2 [Staurastrum punctulatum] gi|122239144|sp|Q32RY1|RR2_STAPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|61393616|gb|AAX45757.1| ribosomal protein S2 [Staurastrum punctulatum] Length = 233 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 138/224 (61%), Gaps = 1/224 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +++E+GV FGH+ WNPKM YIF +R +I+ + +T +L +A + ++ ++ Sbjct: 8 ISLEEMMEAGVHFGHQTRKWNPKMAPYIFTKRRGIYILHIFKTARLLAEACEFSANAASQ 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G + L V TK QA+D V AAK++ + VN KWLGGM+TNW T+ + +L+ LE+ N Sbjct: 68 GKQFLIVGTKYQAADLVSAAAKKARCHYVNQKWLGGMLTNWSTIETRVTRLKQLEDQENA 127 Query: 126 E-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE ++R+ +L++ L+GI+ M LPD++ ++D +E A++E +L IP Sbjct: 128 GVLNQLPKKEAAVLKRQLIQLRKYLEGIKYMTRLPDIVIIIDQQKEATAVEECIKLGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 + +VDT+ +PDL D IP NDD+ SI D + +A +G R Sbjct: 188 ICLVDTDCDPDLTDMPIPANDDARSSIRWILDKLTTAIREGRNR 231 >gi|194099757|ref|YP_002002892.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae NCCP11945] gi|240015553|ref|ZP_04722093.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA6140] gi|240114118|ref|ZP_04728608.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11] gi|240114643|ref|ZP_04728705.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18] gi|240116843|ref|ZP_04730905.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1] gi|240120181|ref|ZP_04733143.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID24-1] gi|240122478|ref|ZP_04735434.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332] gi|240126674|ref|ZP_04739560.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679] gi|240127188|ref|ZP_04739849.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035] gi|260441551|ref|ZP_05795367.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2] gi|193935047|gb|ACF30871.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae NCCP11945] Length = 237 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 163/237 (68%), Gaps = 2/237 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + VA G Sbjct: 1 MRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + L N Sbjct: 61 TVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L IP++A Sbjct: 121 ESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ-HSYMGADTKSAGE 242 VVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + + A ++A E Sbjct: 181 VVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQALQETVAAAQETAAE 237 >gi|292559499|ref|YP_003540920.1| 30S ribosomal protein S2 [Phoenix dactylifera] gi|290790907|gb|ADD63162.1| 30S ribosomal protein S2 [Phoenix dactylifera] gi|294620566|gb|ADF28135.1| 30S ribosomal protein S2 [Phoenix dactylifera] Length = 236 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L + ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTRTARFLSETCDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E Sbjct: 67 RGKNFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +K++ ++RK L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 MGKLNCLSKRDAAMLKRKLSTLQTYLGGIKYMAGLPDIVIIVDQQEEYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRS 230 >gi|219847467|ref|YP_002461900.1| 30S ribosomal protein S2 [Chloroflexus aggregans DSM 9485] gi|254764466|sp|B8G458|RS2_CHLAD RecName: Full=30S ribosomal protein S2 gi|219541726|gb|ACL23464.1| ribosomal protein S2 [Chloroflexus aggregans DSM 9485] Length = 238 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 110/228 (48%), Positives = 151/228 (66%), Gaps = 1/228 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 TIR+LLE+G FGH WNPKM+ YIF RN HIIDL +TV L +A Q I++ AR Sbjct: 9 VTIRELLEAGAHFGHPTNRWNPKMKPYIFTARNGIHIIDLQKTVAGLSQAYQFITEVTAR 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +ILFV TK QA + VME A R+ Q+ +N +WLGG +TN+ T+ + ++ L DLEE ++ Sbjct: 69 GEKILFVGTKKQAQEAVMEEAIRAGQFYINRRWLGGTLTNFATMKRRLKLLSDLEEQRDR 128 Query: 126 EN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TK E +E K D+L R G++ M LP +F+VD +E+LA++EA + IPI Sbjct: 129 GDFARLTKAEAAKLEEKIDRLNRVFAGLKGMDRLPGAIFIVDPRKEELAVREADKEGIPI 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 VA+VDTN +PD +DYVIP NDD+ R I L +A AAI+G+ R+ S Sbjct: 189 VAMVDTNCDPDPIDYVIPCNDDAIRGIRLMTSKIADAAIEGMRRRESS 236 >gi|195928823|gb|ACG56091.1| ribosomal protein subunit 2 [Aureolaria pectinata] gi|195928825|gb|ACG56092.1| ribosomal protein subunit 2 [Aureolaria pedicularia] gi|195928829|gb|ACG56094.1| ribosomal protein subunit 2 [Dasistoma macrophylla] Length = 218 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 127/218 (58%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLGEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFA 218 >gi|213019021|ref|ZP_03334828.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995130|gb|EEB55771.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 281 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 171/258 (66%), Gaps = 6/258 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ TIR L ESGV FGH+ WN KM YI+ ++N HIIDL +T+P+L+ A++ + Sbjct: 14 LPKVTIRDLAESGVHFGHKVSRWNAKMAPYIYGVHQQNRIHIIDLRKTLPLLEAAMKALY 73 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D ++ GRILFV TK QA D V A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 74 DVASQDGRILFVGTKFQALDIVASEAVRCGQYYVNDRWLGGMLTNWNTVSSSIKTLIQYE 133 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+KR KL + L GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 134 KILNDEDSILTKKELGNIEKKRKKLDKELGGIREMGAVPDILFIIDTNKEHIAVKEAKKL 193 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+V V+DTNS+PD + Y I GNDDS +SI L+C L A + + GI + Sbjct: 194 GIPVVGVLDTNSDPDDIAYPISGNDDSRKSIELYCKLAADSILAGIESSLTRSRV----K 249 Query: 241 GETVVHSKEGMQLEEDSQ 258 + ++ KEG ++ + Sbjct: 250 DDELIQEKEGGIVQTKKK 267 >gi|296112503|ref|YP_003626441.1| 30S ribosomal protein S2 [Moraxella catarrhalis RH4] gi|295920197|gb|ADG60548.1| 30S ribosomal protein S2 [Moraxella catarrhalis RH4] gi|326561540|gb|EGE11883.1| 30S ribosomal protein S2 [Moraxella catarrhalis 7169] gi|326564121|gb|EGE14359.1| 30S ribosomal protein S2 [Moraxella catarrhalis 46P47B1] gi|326564822|gb|EGE15030.1| 30S ribosomal protein S2 [Moraxella catarrhalis 12P80B1] gi|326566502|gb|EGE16649.1| 30S ribosomal protein S2 [Moraxella catarrhalis 103P14B1] gi|326568010|gb|EGE18102.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC7] gi|326570687|gb|EGE20721.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC1] gi|326571243|gb|EGE21266.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC8] gi|326573075|gb|EGE23048.1| 30S ribosomal protein S2 [Moraxella catarrhalis CO72] gi|326577227|gb|EGE27120.1| 30S ribosomal protein S2 [Moraxella catarrhalis 101P30B1] gi|326577806|gb|EGE27675.1| 30S ribosomal protein S2 [Moraxella catarrhalis O35E] Length = 271 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 112/253 (44%), Positives = 157/253 (62%), Gaps = 1/253 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q ++R LLE+G FGH+ WNPKM +YIF RN HII+L TV +AL ++ A Sbjct: 8 QISMRDLLEAGAHFGHQTRFWNPKMSQYIFGARNRIHIINLEHTVKQFNEALTFVNKQAA 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-L 123 +ILFV TK A + E A+R+ V+ +WLGGM+TNWKT+ QSI +L++LE+ Sbjct: 68 ARNKILFVGTKRAAGAVIREQAQRAGMPYVDHRWLGGMLTNWKTLRQSITRLKELEKQAE 127 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TK+E L R+ +KL+RAL GI++MGGLPD +FVVD + E +AI+EA+ L IP Sbjct: 128 DGTFAKLTKREALERTRQMEKLERALGGIKEMGGLPDALFVVDVDHEAIAIKEAKNLGIP 187 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++ +VDTNSNPD VDYVI NDD+ R+I+L+ +A A I G + AD A + Sbjct: 188 VIGIVDTNSNPDNVDYVIAANDDAIRAISLYVTAMADAIIAGKEYAKTQGHADAADADKQ 247 Query: 244 VVHSKEGMQLEED 256 +E+ Sbjct: 248 ANRENATAPVEDK 260 >gi|325105873|ref|YP_004275527.1| SSU ribosomal protein S2P [Pedobacter saltans DSM 12145] gi|324974721|gb|ADY53705.1| SSU ribosomal protein S2P [Pedobacter saltans DSM 12145] Length = 270 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 100/268 (37%), Positives = 160/268 (59%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH WNPKM +YIF ERN HIIDL++T+ +++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWNPKMAQYIFMERNGIHIIDLNKTLVKVEEAAAAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFV+TK QA D V E AK V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 61 VKSGRKVLFVSTKKQAKDIVAEKAKSVNMPFVTERWLGGMLTNFTTVRKSIKKMTNIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE+L I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTFDVLSKKEKLMIQRERIKLENLLGGIADLNRLPAALFIIDVKKEHIAVSEAMKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP A+VDTNS+P +D+ IP NDD+++SI+L ++ A +G+ + A+ Sbjct: 181 IPTFAMVDTNSDPSNIDFPIPANDDATKSISLITGIIIKAIEEGLEERKQEKDAEADKEA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + + +E+S V + + Sbjct: 241 AAAKAKVDAPEAKEESAKRSKKVAEETQ 268 >gi|17129600|dbj|BAB72238.1| ribosomal protein subunit 2 [Cistanche tubulosa] Length = 240 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 81/223 (36%), Positives = 127/223 (56%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPK+ YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ + VN KWLGGM+TNW T + + RD E Sbjct: 67 RGKQFLIVGTKNKAADSVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +++ ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP Sbjct: 127 MGRLNRLPRRDSAVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGR 229 >gi|254797267|ref|YP_003082109.1| ribosomal protein S2 [Neorickettsia risticii str. Illinois] gi|254590505|gb|ACT69867.1| ribosomal protein S2 [Neorickettsia risticii str. Illinois] Length = 298 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 122/268 (45%), Positives = 173/268 (64%), Gaps = 18/268 (6%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + T++ L E G GH+ WNPKM YI+ N THI+DL +TVPML+ AL+ ISD Sbjct: 7 RVTVKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALKAISDVA 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A GR+LFV TK QA D + E A R Q+ VN +W GM TNW TVS+S++KL E+LL Sbjct: 67 ANSGRVLFVGTKMQACDIIKEEAMRCGQHYVNLRWPSGMFTNWNTVSKSVKKLVHYEKLL 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E +KKERL+I RKR+++++ L G+R MGGLP ++FV+D +E +A++EA +L IP Sbjct: 127 EQEGDVLSKKERLSINRKRERIEKYLGGVRKMGGLPSIIFVIDPKKEHIAVEEAWKLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VAVVDTN +P + Y IPGNDDS R I +C LVA A + GI E+ Sbjct: 187 VVAVVDTNCDPSKITYSIPGNDDSLRCIEYYCGLVADAVLVGI---------------ES 231 Query: 244 VVHSKEGMQLEE--DSQSSESSVLDGQE 269 + K+ +L++ D +++++S DGQ+ Sbjct: 232 ELQRKQSRELDDKADEKAAKASHSDGQK 259 >gi|219870542|ref|YP_002474917.1| 30S ribosomal protein S2 [Haemophilus parasuis SH0165] gi|254764479|sp|B8F3R7|RS2_HAEPS RecName: Full=30S ribosomal protein S2 gi|219690746|gb|ACL31969.1| 30S ribosomal protein S2 [Haemophilus parasuis SH0165] Length = 241 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 107/228 (46%), Positives = 153/228 (67%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV FGH+ WNP+M+ YIF RN HII+L +T+P+ AL ++ Sbjct: 1 MAQVSMRDMLNAGVHFGHQTRYWNPQMKPYIFGARNGVHIINLEKTLPLFNDALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+ILFV TK ASD V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKILFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L+ R KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 SQDGTFDKLTKKEALDRTRDMAKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ A+VDTN++P V++VIPGNDD++R+I L+ D +A +G ++ Sbjct: 181 IPVFAIVDTNASPAGVNHVIPGNDDAARAIQLYLDAAVAAIKEGRGQE 228 >gi|326909383|ref|YP_004327652.1| ribosomal protein S2 [Hevea brasiliensis] gi|308523497|gb|ADO33547.1| ribosomal protein S2 [Hevea brasiliensis] Length = 236 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 82/222 (36%), Positives = 125/222 (56%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 R + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RD E Sbjct: 67 RRKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K + ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 TGRLNRLPKGDAARLKRQLTHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECMTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPTNDDAIASIRLILNKLVFAICEG 228 >gi|190571619|ref|YP_001975977.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|238058204|sp|B3CNG9|RS2_WOLPP RecName: Full=30S ribosomal protein S2 gi|190357891|emb|CAQ55351.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 271 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 171/258 (66%), Gaps = 6/258 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVIS 60 LP+ TIR L ESGV FGH+ WN KM YI+ ++N HIIDL +T+P+L+ A++ + Sbjct: 4 LPKVTIRDLAESGVHFGHKVSRWNAKMAPYIYGVHQQNRIHIIDLRKTLPLLEAAMKALY 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D ++ GRILFV TK QA D V A R QY VN +WLGGM+TNW TVS SI+ L E Sbjct: 64 DVASQDGRILFVGTKFQALDIVASEAVRCGQYYVNDRWLGGMLTNWNTVSSSIKTLIQYE 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++LN E+ TKKE NIE+KR KL + L GIR+MG +PD++F++DTN+E +A++EA++L Sbjct: 124 KILNDEDSILTKKELGNIEKKRKKLDKELGGIREMGAVPDILFIIDTNKEHIAVKEAKKL 183 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+V V+DTNS+PD + Y I GNDDS +SI L+C L A + + GI + Sbjct: 184 GIPVVGVLDTNSDPDDIAYPISGNDDSRKSIELYCKLAADSILAGIESSLTRSRV----K 239 Query: 241 GETVVHSKEGMQLEEDSQ 258 + ++ KEG ++ + Sbjct: 240 DDELIQEKEGGIVQTKKK 257 >gi|169794062|ref|YP_001718426.1| ribosomal protein S2 [Manihot esculenta] gi|209573612|sp|B1NWD9|RR2_MANES RecName: Full=30S ribosomal protein S2, chloroplastic gi|157695874|gb|ABV66143.1| ribosomal protein S2 [Manihot esculenta] Length = 236 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINFEEMMKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 R + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RD E Sbjct: 67 RRKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K + ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP Sbjct: 127 AGRLNRLPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECMTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADISIPTNDDAIASIRLILNKLVFAICEGRS 230 >gi|208435434|ref|YP_002267100.1| ribosomal protein S2 [Helicobacter pylori G27] gi|208433363|gb|ACI28234.1| ribosomal protein S2 [Helicobacter pylori G27] Length = 261 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 111/263 (42%), Positives = 165/263 (62%), Gaps = 3/263 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE GV FGH+ WNPK +++IF R N HIIDL +T+ + ++ D A+G Sbjct: 1 MKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 I+FV TK QA++ + E A+ VN +WLGGM+TN+ T+ +S++KL +EE+ N + Sbjct: 61 SIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENSGQ 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE+L I RK++KL + L G+R M +PD++FV+D +EK+A+ EAR+L IPIVA Sbjct: 121 IDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPIVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +DTN +PDLVDY IPGNDD+ RSI LFC ++ A ++G + +++ E Sbjct: 181 PLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIEFV 240 Query: 247 SKEGMQLEEDSQSSESSVLDGQE 269 S E + EE + + G E Sbjct: 241 SNE--EKEEMLAEIQKEITQGAE 261 >gi|27904714|ref|NP_777840.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|31076869|sp|Q89AP2|RS2_BUCBP RecName: Full=30S ribosomal protein S2 gi|27904111|gb|AAO26945.1| ribosomal protein S2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 228 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 146/226 (64%), Gaps = 1/226 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R +L +GV FGH+ WNPKM+ +IF +N HII+L +T+ M AL + R Sbjct: 3 VSMRDMLNAGVHFGHQTRYWNPKMKPFIFGSKNKVHIINLEKTMTMFNFALFELKKISLR 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G+ILFV TK AS + E+A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 63 KGKILFVGTKQSASKIIKESAILCKQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSQD 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 TKKE L R+ KL+ +L GI++MG LPD +FVVD + E +AI+EA L I + Sbjct: 123 GTFNKLTKKEVLLRMRELSKLENSLGGIKEMGSLPDALFVVDADHEHIAIREANNLGISV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 ++VDTNS+PD VD++IPGNDD+ R++ L+ + V+ + + Sbjct: 183 FSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLNAVSKVIKKNVKNEK 228 >gi|254467948|ref|ZP_05081354.1| ribosomal protein S2 [beta proteobacterium KB13] gi|207086758|gb|EDZ64041.1| ribosomal protein S2 [beta proteobacterium KB13] Length = 244 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 107/244 (43%), Positives = 160/244 (65%), Gaps = 4/244 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+RQ+LE+GV FGH+ WNPKME +IF ERN HII+L +T+P+ ++A + + + A Sbjct: 2 SVTMRQMLEAGVHFGHQTRYWNPKMESFIFGERNKIHIINLEKTLPLFEEASKFLKNLAA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GRILFV TK QA + V E A+R+ VN +WLGGM+TN+KTV QSI++L +LE ++ Sbjct: 62 NKGRILFVGTKRQAREIVKEEAERAGCPYVNHRWLGGMLTNFKTVKQSIKRLNELETMIA 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K+E L ++R +KL R++ GI++M LPD +FV+D E A++EA +L IP Sbjct: 122 DGSLDKLKKREALTVKRDHEKLVRSIGGIKEMSSLPDAIFVIDVGFESGAVEEATKLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +V +VD+N++ + + YVIPGNDDSSR+I L+ +A A + G + + + KS E Sbjct: 182 VVGIVDSNNSIENISYVIPGNDDSSRAIRLYARGMADAVLAGKNQAITELA---KSVSEE 238 Query: 244 VVHS 247 Sbjct: 239 TTEE 242 >gi|157325519|ref|YP_001468297.1| ribosomal protein S2 [Ipomoea purpurea] gi|209573607|sp|A7Y3B3|RR2_IPOPU RecName: Full=30S ribosomal protein S2, chloroplastic gi|157056747|gb|ABV02337.1| ribosomal protein S2 [Ipomoea purpurea] Length = 236 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HI +L+ T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTGTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V A+ R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 RGKQFLIVGTKNKAADSVARASIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L G++ M GLPD+ +VD ++E A+QE L IP Sbjct: 127 MGGLNRLPKRDATILKRQLARLQTYLGGMKYMTGLPDIAIIVDQHKEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +P+L D IP NDD+ SI + + A +G + Sbjct: 187 TICLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEGRS 230 >gi|46191254|ref|ZP_00120409.2| COG0052: Ribosomal protein S2 [Bifidobacterium longum DJO10A] Length = 293 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 103/232 (44%), Positives = 153/232 (65%), Gaps = 2/232 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKTT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + + A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAIANQATRVNMPYVSERWLGGMLTNFQTVSKRVNRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD +E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLNKQLGGIRNMNRTPSAMFVVDITKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+VA+VDTN++PD V+Y IP NDD+ R I L L+A A +G+ + Sbjct: 181 GIPVVAIVDTNADPDTVEYPIPANDDAIRGIELLTSLMADAVAEGLLERSGA 232 >gi|317484680|ref|ZP_07943581.1| ribosomal protein S2 [Bilophila wadsworthia 3_1_6] gi|316924036|gb|EFV45221.1| ribosomal protein S2 [Bilophila wadsworthia 3_1_6] Length = 261 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 107/238 (44%), Positives = 159/238 (66%), Gaps = 1/238 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM +IF RN HIIDL QTV + + A I +T Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYRTAHDKIVET 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GGR+LF+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +SI++L+ LE + Sbjct: 61 VANGGRVLFIGTKRQAQEAVAAEAGRAGQFHVTNRWMGGTLTNFATIQKSIERLKKLEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L ++R+ KL+ L GI+DM LP L F++D NRE++A++E R+L Sbjct: 121 FADGSVNRYQKKEILTLQREMAKLELTLGGIKDMDRLPQLAFIIDPNREEIAVKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPIVAV DTN +PD++DY+IPGNDD+ R+I LF +A A ++G A + D + Sbjct: 181 IPIVAVTDTNCDPDVIDYIIPGNDDAIRAIKLFVTAMAEACLEGEAMRKDSKNKDAEE 238 >gi|17129602|dbj|BAB72239.1| ribosomal protein subunit 2 [Cistanche tubulosa] Length = 240 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPK+ YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMLEAGVHFGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A++ V AA ++ + VN KWLGGM+TNW T + + RD E Sbjct: 67 RGKQFLIVGTKNKAANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +++ ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP Sbjct: 127 MGRLNRLPRRDSAVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +PDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGR 229 >gi|39938651|ref|NP_950417.1| 30S ribosomal protein S2 [Onion yellows phytoplasma OY-M] gi|61215602|sp|Q6YR51|RS2_ONYPE RecName: Full=30S ribosomal protein S2 gi|39721760|dbj|BAD04250.1| ribosomal protein S2 [Onion yellows phytoplasma OY-M] Length = 271 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 102/224 (45%), Positives = 147/224 (65%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T +QLLESGV FGH WNPKM+ YIF RN HII+L +T ++KA Q + + Sbjct: 1 MAVVTTKQLLESGVYFGHATRKWNPKMKPYIFTSRNGIHIINLKKTSEEIEKAYQELLNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG+ LF+ TK Q + E A+RS QY V+ +WLGG +TN+KT+ + I+ L L + Sbjct: 61 ITSGGKALFLGTKKQIQSAIREEAQRSQQYYVDHRWLGGTLTNFKTILKRIELLHLLHKQ 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++RKRDKL++ L GI+DM LP +FVVD +E +A+ EAR+L Sbjct: 121 EEEGLWKKLPKKEVVQLKRKRDKLEKFLGGIKDMKDLPQAIFVVDPEKESIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I + +VDTN +PDLVDY+IP NDD+ R + L L+A+A ++G Sbjct: 181 IKVFGIVDTNCDPDLVDYIIPANDDAIRGVKLIIWLMANACVEG 224 >gi|195928711|gb|ACG56035.1| ribosomal protein subunit 2 [Agalinis edwardsiana] Length = 217 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 84/216 (38%), Positives = 125/216 (57%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTKKKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 181 TICLIDTNCDPDLADISIPSNDDAISSIRLILNKLV 216 >gi|15806525|ref|NP_295236.1| 30S ribosomal protein S2 [Deinococcus radiodurans R1] gi|25009228|sp|Q9RU79|RS2_DEIRA RecName: Full=30S ribosomal protein S2 gi|6459276|gb|AAF11080.1|AE001995_5 ribosomal protein S2 [Deinococcus radiodurans R1] Length = 264 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 106/267 (39%), Positives = 160/267 (59%), Gaps = 7/267 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH WNPK +++IF ERN IIDL +T+ + ++ I D Sbjct: 1 MSYISMKQLLEAGVHFGHETKRWNPKFKKFIFAERNGIFIIDLQKTLKQVDRSFDYIKDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RGG ILFV TK QA + V A+R+ V S+WLGGM+TN+KT+ I +L +L++L Sbjct: 61 AERGGVILFVGTKKQAQEIVELEARRTGMPYVTSRWLGGMLTNFKTMRTRIDRLNELDDL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E K ER+ + +R++L R + GIR M LPD +FVVD +E +A+QEA +L Sbjct: 121 FESERINDRPKAERIQLASERERLLRFVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+ DT+S+PD++DY++PGNDD+ RSI L V ++ + G + SAG Sbjct: 181 IPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRVGDLLVE------ARGGHEDVSAG 234 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 S E E+ ++ + + Q Sbjct: 235 PVEEQSDEAQAAEQGTEGDTAQLTSSQ 261 >gi|34501433|ref|NP_904220.1| ribosomal protein S2 [Physcomitrella patens subsp. patens] gi|75294046|sp|Q6YXJ9|RR2_PHYPA RecName: Full=30S ribosomal protein S2, chloroplastic gi|34494803|dbj|BAC85070.1| ribosomal protein S2 [Physcomitrella patens subsp. patens] Length = 236 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 83/223 (37%), Positives = 134/223 (60%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV FGH+ WNPKM YIF ER HI++L+QT L +A ++++ + Sbjct: 7 NINLEEMMQAGVHFGHQARKWNPKMASYIFTERKGIHILNLTQTARFLSEACDLLANASS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ++L V TK QA+D V A+ ++ + +N KWLGGM+TNW T+ + +Q+ +DLE Sbjct: 67 KGKQVLIVGTKYQAADLVASASIKARCHYINQKWLGGMLTNWSTIEKRLQRFKDLENKEK 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ +L++ L GI+ M LPD++ ++D +E AI E L IP Sbjct: 127 TGVLNQLPKKEAATLKRQLVQLRKYLGGIKYMTSLPDIVIIIDQQKEITAINECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+ +PDL D IP NDD+ SI + + A +G Sbjct: 187 TICLVDTDCDPDLTDIPIPANDDARASIRWILNKLTLAISEGR 229 >gi|223931093|ref|YP_002586955.1| ribosomal protein S2 [Syntrichia ruralis] gi|219562307|gb|ACL27638.1| ribosomal protein S2 [Syntrichia ruralis] Length = 236 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 89/223 (39%), Positives = 138/223 (61%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH+ WNPKM YIF ER HI++L+QT L +A +++D+ + Sbjct: 7 NIHLEEMMEAGVHFGHQARKWNPKMASYIFTERKGIHILNLTQTARFLSEACDLVADSAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G + L V TK QA+D V A+ ++ + VN KWLGGM+TNW T+ Q +QK ++LE + Sbjct: 67 KGKQFLIVGTKYQAADLVASASIKARCHYVNQKWLGGMLTNWATIEQRLQKFKELENKEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE N++R+ +L++ L+GI+ M LPD++ ++D +E AIQE L IP Sbjct: 127 AGTFNQLPKKEAANLKRQLAQLRKYLEGIKYMTSLPDIVIIIDQQKEITAIQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+ +PDL D IP NDD+ SI + + A +G Sbjct: 187 TICLVDTDCDPDLTDIPIPANDDARASIRWILNKLTLAISEGR 229 >gi|118603032|ref|YP_904247.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166226750|sp|A1AXW9|RS2_RUTMC RecName: Full=30S ribosomal protein S2 gi|118567971|gb|ABL02776.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 312 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 106/260 (40%), Positives = 163/260 (62%), Gaps = 1/260 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++++LE+GV FGHR+ W+PKM R+I+ RN HII+L +T+P+ AL S Sbjct: 1 MAKTSMKKMLEAGVHFGHRSRFWSPKMGRFIYGTRNGVHIINLEKTLPLFNDALNFASKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK AS+ + + A R VN +WLGGMMTN+KT+ SI++L+DLE L Sbjct: 61 TAVGRSILFVGTKRAASNIIKQEAMRCGMPYVNHRWLGGMMTNYKTIKVSIKRLKDLEFL 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + F KKE L + R+ +KL+R+L GI+D+ +PD++FV+D EK A+ EA++L + Sbjct: 121 AEENFNQFGKKEALMMTREMEKLERSLGGIKDLNDIPDVIFVIDIGVEKNAVAEAKKLHL 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG- 241 PI+ +VDTN +P+ +DYVIPGNDDS R+I + +A+A ++ A + + Sbjct: 181 PIIGIVDTNHSPEGIDYVIPGNDDSIRAIGYYAREIANAILEAKAATSTSIEKKVSVKKL 240 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 ET + +E+ E Sbjct: 241 ETKKPGSKKTPIEQVPAKEE 260 >gi|118411020|ref|YP_874415.1| 30S ribosomal protein S2 [Phaeodactylum tricornutum] gi|125987743|sp|A0T0E0|RR2_PHATC RecName: Full=30S ribosomal protein S2, chloroplastic gi|116739767|gb|ABK20638.1| 30S ribosomal protein S2 [Phaeodactylum tricornutum] Length = 226 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 141/226 (62%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ + WNPKM YI+ E NN HI+DL Q+ +L++A + Sbjct: 1 MSDISLSQLLEAGVHFGHKAYRWNPKMFPYIYSEVNNIHILDLVQSATLLKEANLYLESA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 LFV TK QAS + + AKR Y VN +WLGGM+TNW T+ + I L+DLE+ Sbjct: 61 ARENKTFLFVGTKRQASTLIAQEAKRCDSYYVNHRWLGGMLTNWSTLKERIAHLKDLEQQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N TKKE ++ KL+R LDGI+DM LPD+ V+D RE AI+E R+L Sbjct: 121 EANNTFDLLTKKEGALRRKELKKLRRHLDGIKDMKNLPDIAIVIDQKRETTAIRECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP+V+++DTN +PDLVD IPGNDD+ RSI L + + + G + Sbjct: 181 IPVVSILDTNCDPDLVDIPIPGNDDAVRSIKLILKSLTDSILIGKS 226 >gi|91788557|ref|YP_549509.1| 30S ribosomal protein S2 [Polaromonas sp. JS666] gi|123164796|sp|Q12A31|RS2_POLSJ RecName: Full=30S ribosomal protein S2 gi|91697782|gb|ABE44611.1| SSU ribosomal protein S2P [Polaromonas sp. JS666] Length = 250 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 101/246 (41%), Positives = 154/246 (62%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R++LE+GV FGH+ WNPKM YIF RN HII+L +++PM Q A++ A Sbjct: 4 SMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIINLEKSLPMFQDAMKFAKQLSANR 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G IL V TK QA + V AKR+ V+ +WLGGM+TN+KTV SI++L++++ Sbjct: 64 GTILMVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L +R+ +KL++ + GI+DM LPD +FV+D K+AI EA++L IP++ Sbjct: 124 LDSISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGIPLIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVD+N +P +DYVIPGNDDSS+++AL+ +A A ++G A + + + Sbjct: 184 VVDSNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRANAVNDVVKAVSAESSDEFV 243 Query: 247 SKEGMQ 252 E Sbjct: 244 EVENAA 249 >gi|260890245|ref|ZP_05901508.1| ribosomal protein S2 [Leptotrichia hofstadii F0254] gi|260859865|gb|EEX74365.1| ribosomal protein S2 [Leptotrichia hofstadii F0254] Length = 284 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 154/225 (68%), Gaps = 2/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE G FGH+ WNPKM+ YIF ERN HI+DL QT+ + A + + Sbjct: 24 MAVITMKQLLEVGAHFGHQAKRWNPKMKPYIFTERNGIHILDLHQTLGATEAAYEFVRQI 83 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + + E A+R+ + VN +WLGG++TN +T+ + +++L++LEE+ Sbjct: 84 SEEGGKVLFVGTKKQAQEAIKEEAERAGGFYVNHRWLGGLLTNLETIKKRVKRLKELEEM 143 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ +TKKE + ++ KL + + GI++M LP +FVVD +E LA++EA++L Sbjct: 144 DADGTLDEAYTKKEAGLLRKEMAKLSKNIGGIKEMNTLPAALFVVDIKKEFLALEEAKKL 203 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A++DTN +PDLV Y IP NDD+ RS+ LF ++A+AAI+G Sbjct: 204 GIPVIALIDTNVDPDLVTYKIPANDDAIRSVKLFAQVIANAAIEG 248 >gi|330850948|ref|YP_004376698.1| 30S ribosomal protein S2 [Fistulifera sp. JPCC DA0580] gi|328835768|dbj|BAK19064.1| 30S ribosomal protein S2 [Fistulifera sp. JPCC DA0580] Length = 229 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 141/227 (62%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV FGH+ + WNPKM YI+ E NN HI+DL Q+ +L++A + + Sbjct: 1 MSDISLSQLLEAGVHFGHKAYRWNPKMFPYIYSEVNNIHILDLVQSATLLKEANKYLESA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G LF+ TK QAS + + AKR Y VN +WLGGM+TNW TV + I L+DLE+ Sbjct: 61 AKEGKSFLFIGTKRQASTLIAQEAKRCNSYYVNHRWLGGMLTNWSTVKERIAYLQDLEKQ 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE ++ KL++ LDG++ M LPD+ V+D RE AI+E R+L Sbjct: 121 EADNTFDLLTKKEAGLRRKELKKLRKHLDGLKAMPNLPDIAIVIDQKREITAIRECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+V+++DTN +PDLVD IPGNDD+ RSI L + + I G Sbjct: 181 IPVVSILDTNCDPDLVDIPIPGNDDAVRSIKLILKSLTDSIIKGQTE 227 >gi|317165239|gb|ADV08780.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae TCDC-NG08107] Length = 237 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 109/222 (49%), Positives = 157/222 (70%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ++E+GV FGH+ WNPKM +YIF RN HI++L +T+PM Q+A + + VA G Sbjct: 1 MRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +LFV TK QA D + E A R+ V+ +WLGGM+TN+KTV QSI++L + L N Sbjct: 61 TVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 GF+KKE L ++R +KL+R+L GI++M GLPD +FV+DT +K + EA +L IP++A Sbjct: 121 ESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 VVDTN++PD V YVIPGNDDS+++I L+C +A A ++G + Sbjct: 181 VVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGKNQ 222 >gi|124025496|ref|YP_001014612.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. NATL1A] gi|72001847|gb|AAZ57649.1| SSU ribosomal protein S2P [Prochlorococcus marinus str. NATL2A] gi|123960564|gb|ABM75347.1| 30S ribosomal protein S2 [Prochlorococcus marinus str. NATL1A] Length = 222 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 91/217 (41%), Positives = 131/217 (60%), Gaps = 1/217 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++E+G FGH+ WNPKM RYI+ RN HIIDL +T + A + G R L Sbjct: 1 MMEAGAHFGHQTRRWNPKMSRYIYSARNGVHIIDLVKTAVCMNSAYKWTRGAARSGKRFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QG 129 FV TK QAS+ V + A R VN +WLGGM+TNW T+ I +L+DLE + + Sbjct: 61 FVGTKKQASEVVAQEAIRCGASYVNQRWLGGMLTNWTTMKARIDRLKDLERMESSGAIAM 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE + R+ ++L++ L G++ M LPD++ +VD RE A+ EAR+L IP+V+++D Sbjct: 121 RPKKEGAVLRRELERLQKYLGGLKGMRRLPDVVVLVDQRRETNAVLEARKLDIPLVSMLD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 TN +PDL + IP NDD+ RS+ L +A A +G Sbjct: 181 TNCDPDLCEIPIPCNDDAVRSVQLVLGRLADAINEGR 217 >gi|163849094|ref|YP_001637138.1| 30S ribosomal protein S2 [Chloroflexus aurantiacus J-10-fl] gi|222527067|ref|YP_002571538.1| 30S ribosomal protein S2 [Chloroflexus sp. Y-400-fl] gi|209573650|sp|A9WAF9|RS2_CHLAA RecName: Full=30S ribosomal protein S2 gi|254764467|sp|B9LEM0|RS2_CHLSY RecName: Full=30S ribosomal protein S2 gi|163670383|gb|ABY36749.1| ribosomal protein S2 [Chloroflexus aurantiacus J-10-fl] gi|222450946|gb|ACM55212.1| ribosomal protein S2 [Chloroflexus sp. Y-400-fl] Length = 238 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 110/231 (47%), Positives = 151/231 (65%), Gaps = 2/231 (0%) Query: 2 ALPQF-TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 ALP+ TIR+LLE+G FGH WNPKM+ YIF RN HIIDL +TV L +A Q I+ Sbjct: 4 ALPRVVTIRELLEAGAHFGHPTNRWNPKMKPYIFTARNGIHIIDLQKTVTGLSRAYQFIT 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ARG ++LFV TK QA + VME A RS Q+ +N +WLGG +TN+ T+ + ++ L DLE Sbjct: 64 ELTARGEKVLFVGTKKQAQEAVMEEAVRSGQFYINQRWLGGTLTNFATIKRRLKLLSDLE 123 Query: 121 ELLN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E + + TK E +E K +L R G++ M LP +F++D +E+LA++EA + Sbjct: 124 EQRDRGDFARLTKAEAAKLEEKIVRLNRVFAGLKGMDRLPGAVFIIDPRKEELAVREAVK 183 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPIVA+VDTN +PD +DYVIP NDD+ R I L +A AAI+G R+ Sbjct: 184 EGIPIVAMVDTNCDPDPIDYVIPCNDDAIRGIRLMAGKIADAAIEGTRRRE 234 >gi|219673977|ref|YP_002456462.1| ribosomal protein S2 [Trifolium subterraneum] gi|193788946|gb|ACF20542.1| ribosomal protein S2 [Trifolium subterraneum] Length = 236 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ +++++ V GHR WNP+ME +I +R THII+L +T L +A ++ D + Sbjct: 7 NITLEEMVKARVHLGHRTRKWNPRMEPFILAKRKGTHIINLLRTARFLSEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK A D V AA R+ + VN KWLGGM+TNW T ++K RD E Sbjct: 67 GGKQFLIVGTKKVAVDSVRRAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+R L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TGKMNSLPKRDAARLKRQLSHLERYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++++DTNS+PDL ++ IP NDDS SI + + A +G + Q Sbjct: 187 TISLIDTNSDPDLANFSIPANDDSIDSIRFILNKLVFAICEGRSSQ 232 >gi|218295070|ref|ZP_03495906.1| ribosomal protein S2 [Thermus aquaticus Y51MC23] gi|218244273|gb|EED10798.1| ribosomal protein S2 [Thermus aquaticus Y51MC23] Length = 263 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 110/268 (41%), Positives = 163/268 (60%), Gaps = 8/268 (2%) Query: 3 LP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +P T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + + D Sbjct: 1 MPLNITVKELLEAGVHFGHERKRWNPKFGRYIYAERNGIHIIDLQKTMVELERTFRFLED 60 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 RGG +LFV TK QA D V A R+ VN +WLGGM+TN+KT++Q + +L +LE Sbjct: 61 LAMRGGTVLFVGTKKQAQDIVRMEADRAGMPYVNQRWLGGMLTNFKTIAQRVNRLEELEN 120 Query: 122 LLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E+ KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L Sbjct: 121 LFASEDINQRPKKEQVRLKHELERLQKYLSGFRRLKRLPDAIFVVDPTKEAIAVREARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A+ DT+S+PDLVDY+IPGNDD+ RSI L A I+ + G S Sbjct: 181 FIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAADLIIE------ARGGVVEPSP 234 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQ 268 +V E M+ + S E + + Sbjct: 235 SYALVEEAERMEAQSRGLSDEGLEDEVE 262 >gi|225619456|ref|YP_002720703.1| 30S ribosomal protein S2 [Brachyspira hyodysenteriae WA1] gi|225214275|gb|ACN83009.1| 30S ribosomal protein S2 [Brachyspira hyodysenteriae WA1] Length = 266 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 159/229 (69%), Gaps = 1/229 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH W+P+M+ +IF ERN+ +IIDL +T+ ++KA + + + GG Sbjct: 1 MKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAHEAVKEMARNGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +LFV TK QAS + EAA++ Y VN++WLGGM+TN+ T+ +SI +L+ +E E ++ Sbjct: 61 NVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKKIEKEEVDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE + + +++++L++ GI+DM LPD++FV+D +E +A+ EAR+L IP+VA Sbjct: 121 FDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAIAVSEARKLGIPVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 VVDTN NP+++D+ IPGNDD+ R+I+LF +VASA I+G A Sbjct: 181 VVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEGQNEAGKETLA 229 >gi|82393639|gb|ABB72113.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 104/268 (38%), Positives = 159/268 (59%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIDQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|166154022|ref|YP_001654140.1| 30S ribosomal protein S2 [Chlamydia trachomatis 434/Bu] gi|166154897|ref|YP_001653152.1| 30S ribosomal protein S2 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335222|ref|ZP_07223466.1| 30S ribosomal protein S2 [Chlamydia trachomatis L2tet1] gi|82393633|gb|ABB72109.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393636|gb|ABB72111.1| ribosomal protein S2 [Chlamydia trachomatis] gi|165930010|emb|CAP03493.1| SSU ribosomal protein S2 [Chlamydia trachomatis 434/Bu] gi|165930885|emb|CAP06447.1| SSU ribosomal protein S2 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 282 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 104/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIDQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLIVNTLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|139387455|ref|YP_001122809.1| ribosomal protein S2 [Phaseolus vulgaris] gi|209573620|sp|A4GGA8|RR2_PHAVU RecName: Full=30S ribosomal protein S2, chloroplastic gi|112030977|gb|ABH88089.1| ribosomal protein S2 [Phaseolus vulgaris] gi|158187146|gb|ABW22779.1| ribosomal protein S2 [Phaseolus vulgaris] Length = 236 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI R HI +L +T L ++ ++ + Sbjct: 7 NIILEEMMEAGVHFGHGTRKWNPKMSPYISANRKGIHITNLIRTARFLSESCDLVFHAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G + L V TK +A+D V AA R+ + VN KWLGGM+TNW T +QK RDL Sbjct: 67 GGKQFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTKTRLQKFRDLRMQQK 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F KK+ ++R +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TGRFDCFPKKDAAILKRHLAQLETYLGGIKYMKGLPDIVIIIDQQEEYTALRECITLEIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTNS+PDL D IP NDD+ SI + + A +G +R Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRFILNKLVFAICEGRSRS 232 >gi|310779564|ref|YP_003967897.1| SSU ribosomal protein S2P [Ilyobacter polytropus DSM 2926] gi|309748887|gb|ADO83549.1| SSU ribosomal protein S2P [Ilyobacter polytropus DSM 2926] Length = 248 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 151/225 (67%), Gaps = 2/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL +++ +++A ++ Sbjct: 1 MAVVTMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIEEAYSILRGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG +LFV TK QA D + E A+R+ Y +N++WLGGM+TN++T+ I++L+ LE + Sbjct: 61 AADGGSVLFVGTKKQAQDSIREQAERAGMYYINNRWLGGMLTNFETIKARIERLKMLETM 120 Query: 123 LNKE--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +TKKE + ++ KL + L GI++M LP +FVVD +E LAI EA +L Sbjct: 121 DKDGTLDDSYTKKEAAQLRKELAKLSKNLSGIKNMKKLPAAIFVVDVKKEALAITEAVKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP++A+VD+N +P+ + Y IP NDD+ RS+ L +VA+A I+G Sbjct: 181 GIPVIAMVDSNVDPEPITYPIPANDDAIRSVKLMSTIVANAVIEG 225 >gi|119025799|ref|YP_909644.1| 30S ribosomal protein S2 [Bifidobacterium adolescentis ATCC 15703] gi|118765383|dbj|BAF39562.1| 30S ribosomal protein S2 [Bifidobacterium adolescentis ATCC 15703] Length = 297 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 104/252 (41%), Positives = 159/252 (63%), Gaps = 2/252 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I Sbjct: 25 TMAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKA 84 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TVA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE Sbjct: 85 TVAHNGTVLFVGTKKQAQEAVSAQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEE 144 Query: 122 LL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA + Sbjct: 145 MDFTDVHGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHK 204 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + Sbjct: 205 LGIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERSGKAAKAEGE 264 Query: 240 AGETVVHSKEGM 251 A + + ++ + Sbjct: 265 AEQPMAAWEKEL 276 >gi|86135103|ref|ZP_01053685.1| 30S ribosomal protein S2 [Polaribacter sp. MED152] gi|85821966|gb|EAQ43113.1| 30S ribosomal protein S2 [Polaribacter sp. MED152] Length = 286 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 103/270 (38%), Positives = 163/270 (60%), Gaps = 5/270 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I++LL+SGV FGH WNP M YI+ ERN HIIDL +T +++ + + Sbjct: 1 MANINIQELLDSGVHFGHLTRKWNPNMAPYIYTERNGVHIIDLYKTAAKIEETSEALKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA D V E AK + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 ANSGRKILFVATKKQAKDIVAEKAKAVNMPYITERWPGGMLTNFVTIRKAVKKMASIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R+KL++ L I DM LP +FV+D +E +A+ EA++L Sbjct: 121 KQDGSFDALSKREKLQINRQREKLEKNLGSISDMTRLPGALFVIDIKKEHIAVAEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS--YMGADTKS 239 IPI A+VDTNS+P LVDYVIP NDD+S+SI V A +G++ + + G +TK+ Sbjct: 181 IPIFAMVDTNSDPRLVDYVIPANDDASKSIDKVLGFVTDAIAEGLSERKADKEKGKETKA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + +K+ ++ E + E +V++ E Sbjct: 241 PKKEKAPAKDAVKAE--KPNLEEAVVNTTE 268 >gi|262277279|ref|ZP_06055072.1| ribosomal protein S2 [alpha proteobacterium HIMB114] gi|262224382|gb|EEY74841.1| ribosomal protein S2 [alpha proteobacterium HIMB114] Length = 281 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 119/264 (45%), Positives = 186/264 (70%), Gaps = 2/264 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M LP+ T++ LLE+GV GH+ F WNPKM+ YIF E+N+ HIIDLS+T+ +L+ AL + Sbjct: 20 MNLPEVTVKDLLEAGVHLGHKTFRWNPKMKPYIFGEKNSIHIIDLSKTLELLKTALLELH 79 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +V+ GG++LFV+TK QAS+ + E AK + Y VN +WLGGM+TNW T++ SI++L++L+ Sbjct: 80 KSVSSGGKVLFVSTKKQASELIAEVAKETDNYYVNFRWLGGMLTNWNTITNSIKRLKELK 139 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + L KE+ GFTKKE + + +++KL+R+L GI +M +PD++FV+DTN E LA+ EA++L Sbjct: 140 KNLLKEDSGFTKKELIKMNLEKEKLERSLGGISEMKKIPDIIFVIDTNIESLAVLEAKKL 199 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+ V+D+NS+PD +D+ IPGNDD+ RSI L+CDL+ +D A+++ + + Sbjct: 200 NIPIIGVLDSNSDPDNIDFPIPGNDDARRSINLYCDLIKKTILD--AKKNIKVSEKKEKI 257 Query: 241 GETVVHSKEGMQLEEDSQSSESSV 264 + + K + E + + S Sbjct: 258 NDNLKDQKSNNKKEINKEDKNVSA 281 >gi|76443861|gb|ABA42635.1| S2 ribosomal protein [Chlamydia trachomatis] gi|82393666|gb|ABB72131.1| ribosomal protein S2 [Chlamydia trachomatis] gi|289525724|emb|CBJ15205.1| SSU ribosomal protein S2 [Chlamydia trachomatis Sweden2] gi|296435294|gb|ADH17472.1| 30S ribosomal protein S2 [Chlamydia trachomatis E/150] gi|296439012|gb|ADH21165.1| 30S ribosomal protein S2 [Chlamydia trachomatis E/11023] Length = 282 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLTKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|195928715|gb|ACG56037.1| ribosomal protein subunit 2 [Agalinis fasciculata] gi|195928717|gb|ACG56038.1| ribosomal protein subunit 2 [Agalinis fasciculata] Length = 218 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 86/218 (39%), Positives = 126/218 (57%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NIDLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKRAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTNS+PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNSDPDLADLSIPANDDARSSICLILNKLVFA 218 >gi|71892053|ref|YP_277783.1| 30S ribosomal protein S2 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123734156|sp|Q493D2|RS2_BLOPB RecName: Full=30S ribosomal protein S2 gi|71796159|gb|AAZ40910.1| 30S ribosomal subunit protein S2 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 228 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 105/221 (47%), Positives = 149/221 (67%), Gaps = 1/221 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +IR +L++GV FGH+ WNPKM+ +IF RN HIIDL T M ++AL ++ Sbjct: 1 MENISIRDMLQAGVHFGHQTRYWNPKMKPFIFGVRNKIHIIDLETTSVMFRQALIELNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G+ILFV TK AS+ V + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 AALKGKILFVGTKRAASESVKKTALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L + R+ L+ +L GI++MGGLPD +F V E +AI+EA L Sbjct: 121 SQDGTFKKLTKKEALILNRELINLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEANSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP+ A+VDTNSNPD +D+VIPGNDD+ R+I L+ +++++ Sbjct: 181 IPVFAIVDTNSNPDGIDFVIPGNDDAVRAINLYLNIISNMI 221 >gi|149390343|ref|YP_001294341.1| ribosomal protein S2 [Dioscorea elephantipes] gi|209573601|sp|A6MMJ6|RR2_DIOEL RecName: Full=30S ribosomal protein S2, chloroplastic gi|148668035|gb|ABR01419.1| ribosomal protein S2 [Dioscorea elephantipes] Length = 236 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L+ T L +A ++ D + Sbjct: 7 NINLPEMMEAGVHFGHGTKKWNPRMAPYISAKRKGIHITNLTITARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T + K RDL N Sbjct: 67 RGKSFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRAEQN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+ L GI+ M GLPD++ +VD +E +A+QE L IP Sbjct: 127 MGKLNRLPKRDAAMLKRKLSALQSYLGGIKYMTGLPDIVIIVDQEKEYMALQECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN NPDL D IP NDD+ SI L + + A +G Sbjct: 187 TICLIDTNCNPDLADISIPANDDAIASIRLILNKLVFAICEGR 229 >gi|295136942|ref|YP_003587775.1| ribosomal protein S2 [Lathyrus sativus] gi|293338664|gb|ADE43636.1| ribosomal protein S2 [Lathyrus sativus] Length = 231 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ ++L++GV FGH WNP+M +I +R HI +L++T L +A + D + Sbjct: 7 NITLEEMLKAGVHFGHETRKWNPRMAPFISAKRKGNHITNLTKTARFLSEACDLAFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK + + V AA R+ + VN KWLGGM+TNW T ++K RD E Sbjct: 67 KGKQFLIVGTKRKVAYSVRRAAIRARCHYVNKKWLGGMLTNWYTTETRLRKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ ++D E A+QE L IP Sbjct: 127 TGKLNSLPKRDAAMLKRQLSHLETYLGGIKYMTGLPDIVIILDQEEEYKALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + V+DTN +PDL D IP NDD+ SI + + A +G + Sbjct: 187 TICVIDTNCDPDLADLPIPANDDTMASIGFILNKLVFAICEGRS 230 >gi|154491981|ref|ZP_02031607.1| hypothetical protein PARMER_01612 [Parabacteroides merdae ATCC 43184] gi|218264808|ref|ZP_03478502.1| hypothetical protein PRABACTJOHN_04212 [Parabacteroides johnsonii DSM 18315] gi|154088222|gb|EDN87267.1| hypothetical protein PARMER_01612 [Parabacteroides merdae ATCC 43184] gi|218221781|gb|EEC94431.1| hypothetical protein PRABACTJOHN_04212 [Parabacteroides johnsonii DSM 18315] Length = 280 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 100/274 (36%), Positives = 158/274 (57%), Gaps = 2/274 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+GV FGH WNP M YIF ERN HIIDL +TV + +A +V+ + Sbjct: 1 MSRVNFDQLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G ++LFVATK QA V + A V +W GGM+TN+ T+ ++I+K+ ++++ Sbjct: 61 AKQGKKVLFVATKKQAKQVVADKASSVGMPYVIERWPGGMLTNFPTIRKAIKKMATIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 TKDGTFDNLSKREKLQITRQRAKLEKTLGSIVDLTRLPSALFVVDVMKEHIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P+ +DYVIP NDD+++S+ + + A +G+ + + DT++AG Sbjct: 181 IPVFGMVDTNSDPNNIDYVIPANDDATKSVEVILGAICEAMNEGLQERKAEK-IDTEAAG 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E +E + D A V + Sbjct: 240 EGEAPKRERKAKAAVKKERTKKEDDEALNANVAD 273 >gi|115391891|ref|YP_778479.1| ribosomal protein S2 [Jasminum nudiflorum] gi|122164984|sp|Q06RE2|RR2_JASNU RecName: Full=30S ribosomal protein S2, chloroplastic gi|110456212|gb|ABG74617.1| ribosomal protein S2 [Jasminum nudiflorum] Length = 238 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 3/226 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE--RNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ +GV FGH WNPKM YI+ + R HI +L++T L +A ++ D Sbjct: 7 NINLEEMMVAGVHFGHPTKQWNPKMAPYIYAKVKRKGIHIPNLTRTARFLSEACDLVFDA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 +RG L V TK +A+ V+ AA R+ + VN KWLGGM+TNW T + RD E Sbjct: 67 ASRGKEFLIVGTKPKAAGSVVRAAIRARCHYVNKKWLGGMLTNWFTTKTRLHTFRDLRME 126 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L Sbjct: 127 QKTGRLNRLPKRDVAMLKRQLSRLQAYLGGIQYMTGLPDIVILVDQHEEYTALRECITLG 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 IPTICLIDTNCDPDLADLPIPANDDAKPSIRLILNKLVFAICEGRS 232 >gi|283769074|ref|ZP_06341980.1| ribosomal protein S2 [Bulleidia extructa W1219] gi|283104431|gb|EFC05808.1| ribosomal protein S2 [Bulleidia extructa W1219] Length = 323 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 165/262 (62%), Gaps = 4/262 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + +++++LE+GV FGH+ WNPKM+ +I+ +N+ +IIDL++T L +A + + Sbjct: 15 LKMTVVSMKKMLENGVHFGHQTRKWNPKMKPFIYTAKNHVYIIDLAKTQEKLDEAYEALK 74 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 GG++LFV TK QA ++E A RS + +N +WLGG +TN++T+ +SI+KL ++E Sbjct: 75 KIAEDGGKVLFVGTKKQAQATILEEALRSGSFYINQRWLGGTLTNFRTIQKSIKKLLEIE 134 Query: 121 ELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E+ + KKE+ + +K+D+L+ L GI++M LPD +FVVD E A+ EAR+ Sbjct: 135 EMEATGAINVYKKKEQALLLKKKDRLENFLGGIKEMKKLPDAIFVVDPLEEHNAVAEARK 194 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A++DTN++PD+VDY IP NDD+ RS+ L +A A ++ + ++ Sbjct: 195 LGIPVFALIDTNADPDMVDYPIPSNDDALRSVKLMVSAIADALVEAKGGVLEVAHQEDEA 254 Query: 240 AGETVVHSKEGMQLEEDSQSSE 261 + + + + +E D Q++E Sbjct: 255 EVDITM---KDVIVEVDRQAAE 273 >gi|82393669|gb|ABB72133.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|303258055|ref|ZP_07344063.1| ribosomal protein S2 [Burkholderiales bacterium 1_1_47] gi|302859074|gb|EFL82157.1| ribosomal protein S2 [Burkholderiales bacterium 1_1_47] Length = 249 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 103/236 (43%), Positives = 156/236 (66%), Gaps = 1/236 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++R+LLE+G FGH+ W+PKM +YIF RN HII+L +TV +A + +++ A+ Sbjct: 2 SMRELLEAGAHFGHQTRFWSPKMSQYIFGSRNKIHIINLEKTVAKFDEAAKFLTNLAAQK 61 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNK 125 G ILFV TK + D ++ AKR+ V+ +WLGGM+TN+KTV S+++L+++E ++ + Sbjct: 62 GTILFVGTKRTSRDAIVAEAKRAGMPYVDQRWLGGMLTNFKTVKVSLKRLKEMEQKVADG 121 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKE L+ R+ +KL +A+ GI++M GLPD + VVD K+AIQEA +L IP+V Sbjct: 122 ALEKMTKKEALDFTRELEKLNKAMGGIKEMNGLPDALVVVDVGYHKIAIQEANKLGIPVV 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +VDTN NP VDYVIPGNDDS+R++AL+ A A ++G + K + Sbjct: 182 GIVDTNHNPAGVDYVIPGNDDSARAVALYAKGFADAILEGKNKNLEDTVKAAKDSD 237 >gi|209363842|ref|YP_001424015.2| 30S ribosomal protein S2 [Coxiella burnetii Dugway 5J108-111] gi|212212243|ref|YP_002303179.1| 30S ribosomal protein S2 [Coxiella burnetii CbuG_Q212] gi|215919172|ref|NP_820375.2| 30S ribosomal protein S2 [Coxiella burnetii RSA 493] gi|206584056|gb|AAO90889.2| SSU ribosomal protein S2P [Coxiella burnetii RSA 493] gi|207081775|gb|ABS78321.2| SSU ribosomal protein S2P [Coxiella burnetii Dugway 5J108-111] gi|212010653|gb|ACJ18034.1| SSU ribosomal protein S2P [Coxiella burnetii CbuG_Q212] Length = 359 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 156/227 (68%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + + Sbjct: 47 MTDITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKEV 106 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE Sbjct: 107 ASKRGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEER 166 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL Sbjct: 167 LENEENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRL 226 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID + Sbjct: 227 GITVLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARS 273 >gi|57229637|gb|AAW45732.1| ribosomal protein subunit 2 [Hyobanche atropurpurea] Length = 214 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 127/214 (59%), Gaps = 1/214 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NITLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E Sbjct: 61 RGKQFLIVGTKNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L IP Sbjct: 121 AGRLNHLPKRDVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 + ++DTN +PDL D IP NDD+ SI L + Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLILNK 214 >gi|195928737|gb|ACG56048.1| ribosomal protein subunit 2 [Agalinis homalantha] Length = 217 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 1/212 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK+QA+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTKNQAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFC 215 + ++DTN +PDL D IP NDD+ SI L Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLIL 212 >gi|295137018|ref|YP_003587565.1| ribosomal protein S2 [Pisum sativum] gi|133913|sp|P08241|RR2_PEA RecName: Full=30S ribosomal protein S2, chloroplastic gi|12138|emb|CAA27546.1| unnamed protein product [Pisum sativum] gi|293338590|gb|ADE43563.1| ribosomal protein S2 [Pisum sativum] Length = 236 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 125/226 (55%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T +++E+GV FGH WNP+M +I +R HI +L++T L +A + D + Sbjct: 7 NITFEEMMEAGVHFGHDTRKWNPRMAPFISAKRKGIHITNLTKTARFLSEACDLAFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK +A+D V AA R+ + VN KWL GM+TNW T + K RD E Sbjct: 67 KGKQFLIVGTKKKAADSVTRAAIRARCHYVNKKWLRGMLTNWYTTETRLGKFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ + L GI+ M GLPD++ +VD +E A+QE L IP Sbjct: 127 TGKLNSLPKRDAAMLKRQLSHFETYLGGIKYMTGLPDIVIIVDQQKEYTALQECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADMSIPANDDAIASIRLILNKLVFAICEGRSSS 232 >gi|195928729|gb|ACG56044.1| ribosomal protein subunit 2 [Agalinis harperi] Length = 218 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI R HI +L++T L + ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISASRKGIHITNLTRTARFLSETCDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +A+ V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTTKKAAYLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHQEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFA 218 >gi|171742884|ref|ZP_02918691.1| hypothetical protein BIFDEN_02001 [Bifidobacterium dentium ATCC 27678] gi|283456089|ref|YP_003360653.1| 30S ribosomal protein S2P [Bifidobacterium dentium Bd1] gi|306822700|ref|ZP_07456078.1| 30S ribosomal protein S2 [Bifidobacterium dentium ATCC 27679] gi|309800990|ref|ZP_07695122.1| ribosomal protein S2 [Bifidobacterium dentium JCVIHMP022] gi|171278498|gb|EDT46159.1| hypothetical protein BIFDEN_02001 [Bifidobacterium dentium ATCC 27678] gi|283102723|gb|ADB09829.1| rpsB SSU ribosomal protein S2P [Bifidobacterium dentium Bd1] gi|304554245|gb|EFM42154.1| 30S ribosomal protein S2 [Bifidobacterium dentium ATCC 27679] gi|308222526|gb|EFO78806.1| ribosomal protein S2 [Bifidobacterium dentium JCVIHMP022] Length = 272 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 103/254 (40%), Positives = 158/254 (62%), Gaps = 2/254 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ A I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDAAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSSQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERSGKAAKAEGET 240 Query: 241 GETVVHSKEGMQLE 254 + + ++ + E Sbjct: 241 EQPMAAWEKELLTE 254 >gi|154487370|ref|ZP_02028777.1| hypothetical protein BIFADO_01220 [Bifidobacterium adolescentis L2-32] gi|209573725|sp|A1A1H9|RS2_BIFAA RecName: Full=30S ribosomal protein S2 gi|154083888|gb|EDN82933.1| hypothetical protein BIFADO_01220 [Bifidobacterium adolescentis L2-32] Length = 272 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 104/251 (41%), Positives = 159/251 (63%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T+ +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSAQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVHGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + A Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERSGKAAKAEGEA 240 Query: 241 GETVVHSKEGM 251 + + ++ + Sbjct: 241 EQPMAAWEKEL 251 >gi|226227182|ref|YP_002761288.1| 30S ribosomal protein S2 [Gemmatimonas aurantiaca T-27] gi|226090373|dbj|BAH38818.1| 30S ribosomal protein S2 [Gemmatimonas aurantiaca T-27] Length = 320 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 102/252 (40%), Positives = 157/252 (62%), Gaps = 4/252 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLL +GV FGH+ WNPKM R+IF ERN HIIDL +T+ ++ A +++ + Sbjct: 1 MSTPSLEQLLAAGVHFGHQTRRWNPKMRRFIFAERNGIHIIDLQKTLRQIELAQKLVREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 V RG +LFV TK Q + V A+R V +WLGGM+TN++TV + ++KL++LE Sbjct: 61 VLRGENVLFVCTKRQLAAIVRNEAERCGAMFVTERWLGGMLTNYQTVKKQVKKLKELEAG 120 Query: 122 -LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +TKKE+L + R+RDKL + L GI+ M LP L+F++D+ +E++A+ EA +L Sbjct: 121 SEEGGGFTNYTKKEQLLMSRQRDKLSKYLSGIKSMHRLPGLLFIIDSKKERIAVSEANKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +PIVA+VDTN++PDL+ I GNDD+ RS+ L +VA + AR+ + + A + Sbjct: 181 GVPIVAIVDTNADPDLITVPIAGNDDAIRSVELIAKVVADTIDE--ARREAPVRAVEEEQ 238 Query: 241 GETVVHSKEGMQ 252 S G + Sbjct: 239 ESYTFSSDRGTE 250 >gi|139439760|ref|ZP_01773151.1| Hypothetical protein COLAER_02182 [Collinsella aerofaciens ATCC 25986] gi|133774910|gb|EBA38730.1| Hypothetical protein COLAER_02182 [Collinsella aerofaciens ATCC 25986] Length = 242 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 100/243 (41%), Positives = 152/243 (62%), Gaps = 5/243 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G FGH+ WNPKM+ +IF ERN +I+DL QT+ +A + + Sbjct: 4 KINIRTLLEAGCHFGHQTRRWNPKMKPFIFGERNGIYILDLKQTILDADQAYTFVKNVA- 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GG +LFV TK QA + V AA+R+ +N +WLGGM+TN+ T+ I ++ +LE ++ Sbjct: 63 KGGNVLFVGTKKQAQEAVKNAAERANMPYINQRWLGGMLTNFVTIRSRINRMEELEAMVE 122 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE+ + ++ KL+ L G RDM GLP +FV+DT RE+ AI+EA+RL IP Sbjct: 123 DGRMAVLPKKEQAVLGKELTKLQTNLGGARDMKGLPQALFVIDTKREENAIKEAQRLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA++DTNS+PD V+Y IP NDD+ ++ L C+L+A A + G ++ ++ + A E Sbjct: 183 VVALIDTNSDPDEVEYGIPCNDDAISAVTLMCELMADACLAGSGKEQV---SEAEMAAEP 239 Query: 244 VVH 246 Sbjct: 240 KAE 242 >gi|212218984|ref|YP_002305771.1| 30S ribosomal protein S2 [Coxiella burnetii CbuK_Q154] gi|212013246|gb|ACJ20626.1| SSU ribosomal protein S2P [Coxiella burnetii CbuK_Q154] Length = 359 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 155/227 (68%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + Sbjct: 47 MTDITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKV 106 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE Sbjct: 107 ASKRGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEER 166 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL Sbjct: 167 LENEENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRL 226 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID + Sbjct: 227 GITVLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARS 273 >gi|255349069|ref|ZP_05381076.1| 30S ribosomal protein S2 [Chlamydia trachomatis 70] gi|255503607|ref|ZP_05381997.1| 30S ribosomal protein S2 [Chlamydia trachomatis 70s] gi|76443864|gb|ABA42637.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 282 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 102/268 (38%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELHLPTGEAQDEASSKEG 268 >gi|220903626|ref|YP_002478938.1| 30S ribosomal protein S2 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254764472|sp|B8J3M5|RS2_DESDA RecName: Full=30S ribosomal protein S2 gi|219867925|gb|ACL48260.1| ribosomal protein S2 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 258 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 105/243 (43%), Positives = 161/243 (66%), Gaps = 2/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A + D Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLFRIAHDKVVDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG++LF+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +S+ +L+ LE + Sbjct: 61 VAKGGKVLFIGTKRQAQEAVAAEAGRAGQFFVTNRWMGGTLTNFVTIQKSVDRLKKLESM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L +ER+ KL+ L GI++M LP + F++D +RE +A++E R+L Sbjct: 121 FADGSINRYQKKEILLLERELAKLEETLGGIKNMDRLPQIAFIIDPHREDIAVKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+AV DTN +PD++DY+IPGNDD+ R+I LF A A ++G A + G +T +A Sbjct: 181 IPIIAVTDTNCDPDVIDYIIPGNDDAIRAIKLFVAAFAEACMEGEAMGKDHKG-ETANAE 239 Query: 242 ETV 244 E + Sbjct: 240 EAM 242 >gi|303325621|ref|ZP_07356064.1| ribosomal protein S2 [Desulfovibrio sp. 3_1_syn3] gi|302863537|gb|EFL86468.1| ribosomal protein S2 [Desulfovibrio sp. 3_1_syn3] Length = 263 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 107/246 (43%), Positives = 159/246 (64%), Gaps = 1/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++Q+LE+GV FGH+ WNPKM YIF RN HIIDL QTV + + A I DT Sbjct: 1 MAYVSMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLFRVAHDKIVDT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA+GG++LF+ TK QA + V A R+ Q+ V ++W+GG +TN+ T+ +S+ +L+ LE + Sbjct: 61 VAKGGKVLFIGTKRQAQEAVAAEAGRANQFHVTNRWMGGTLTNFVTIQKSVDRLKKLEAM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE L +ER+ KL+ L GI++M LP L F++D NRE +A++E R+L Sbjct: 121 FADGSINRYQKKEILLLEREMKKLEETLGGIKNMDRLPQLAFIIDPNREDIAVKECRKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVAV DTN +PDL+DY+IPGNDD+ R+I LF + A ++G A + + + A Sbjct: 181 IPIVAVTDTNCDPDLIDYIIPGNDDAIRAIKLFVAAFSEACLEGEAMSKDHKEVNAEEAM 240 Query: 242 ETVVHS 247 + Sbjct: 241 QKAAAE 246 >gi|212715795|ref|ZP_03323923.1| hypothetical protein BIFCAT_00696 [Bifidobacterium catenulatum DSM 16992] gi|212661162|gb|EEB21737.1| hypothetical protein BIFCAT_00696 [Bifidobacterium catenulatum DSM 16992] Length = 274 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 103/251 (41%), Positives = 158/251 (62%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQINMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSNQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVRGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + A Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERSGKASKAEGEA 240 Query: 241 GETVVHSKEGM 251 + + ++ + Sbjct: 241 EQPMAAWEKEL 251 >gi|313183942|ref|YP_004021796.1| ribosomal protein S2 [Equisetum arvense] gi|281371662|gb|ADA63595.1| ribosomal protein S2 [Equisetum arvense] Length = 235 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++++GV FGH+ WNPKM YIF ++ HI++L+QT L +A ++ + Sbjct: 7 NIDLEDMMKAGVHFGHQVQKWNPKMAPYIFTQQKGVHILNLTQTARFLSEACDLLFNAAN 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G + + V T Q SD V AA ++ + VN KWLGGM+TNW T+ +Q+ +LE+ N Sbjct: 67 EGKQFMVVGTDQQVSDLVKLAASKARCHYVNQKWLGGMLTNWSTIETRLQEFEELEKKQN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 F K+E +++ L++ L GI+ M LPD++ +V+ +E AI+E R L IP Sbjct: 127 LGGLHRFPKREAAVAKKQLSSLQKYLGGIKYMTTLPDIVIIVNQQKELTAIKECRILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+ NPDLVD IP NDD+ S+ + +ASA +G + + Sbjct: 187 TICIVDTDCNPDLVDIPIPANDDARSSVRWILNELASAIREGRSNE 232 >gi|218962147|ref|YP_001741922.1| 30S ribosomal subunit protein S2 [Candidatus Cloacamonas acidaminovorans] gi|167730804|emb|CAO81716.1| 30S ribosomal subunit protein S2 [Candidatus Cloacamonas acidaminovorans] Length = 290 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 111/225 (49%), Positives = 161/225 (71%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++QLLE+GV FGH+ F WNPKM++YIF +RN HIIDL QTV + +A Q + + Sbjct: 18 MSVVTMKQLLEAGVHFGHQTFKWNPKMKKYIFIKRNGIHIIDLKQTVDAINEAYQFMKEV 77 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + EAA+++ + VN +W GGM+TN T+ QSI+K++ EE+ Sbjct: 78 ASKGEYILFVGTKKQAQAAIKEAAEKAGVFYVNQRWYGGMLTNMATIRQSIEKMKYYEEI 137 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + G+TK E+ ++R DK++ +L GIR+M LP +F+VDT EK+A+ EAR L Sbjct: 138 VADGTINGYTKLEQQKMKRMHDKIEFSLGGIREMDALPGCVFIVDTEYEKIAVHEARILN 197 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IPIVA+VDTN +PDL+DYVIP NDD++R+I L D++A+A I+G Sbjct: 198 IPIVAMVDTNCDPDLIDYVIPSNDDATRAIHLISDIMANAVIEGK 242 >gi|322379387|ref|ZP_08053758.1| 30S ribosomal protein S2 [Helicobacter suis HS1] gi|322380330|ref|ZP_08054541.1| 30S ribosomal protein S2 [Helicobacter suis HS5] gi|321147237|gb|EFX41926.1| 30S ribosomal protein S2 [Helicobacter suis HS5] gi|321148205|gb|EFX42734.1| 30S ribosomal protein S2 [Helicobacter suis HS1] Length = 261 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 115/262 (43%), Positives = 160/262 (61%), Gaps = 5/262 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE GV FGH+ WNPK R+IF R N HIIDL +T+ + ++ D A G Sbjct: 1 MKDLLECGVHFGHQTRRWNPKTARFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAEGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 I+FV TK QASD + E A + VN +WLGGM+TN T+ +S++KL +EE+ N + Sbjct: 61 TIMFVGTKKQASDTLKEYATQVNVPYVNYRWLGGMLTNLSTIRKSVRKLEIMEEMENSGQ 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE+L I RK++KL++ L G+R M +PD+MF++D +EK+A+ EARRL IPI+A Sbjct: 121 IDLLTKKEKLMILRKKEKLEKYLGGVRHMKKMPDMMFIIDVVKEKIAVAEARRLGIPIIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +DTN +PDLVDY IPGNDD+ RSIALFC +A A +G +G + E V Sbjct: 181 PLDTNCDPDLVDYPIPGNDDAIRSIALFCKEMAEAITEGR----ELVGKSEEVVEEVVEE 236 Query: 247 SKEGMQLEEDSQSSESSVLDGQ 268 E++ E G+ Sbjct: 237 MIAASGAEQEEILEEVRQEQGE 258 >gi|164597820|ref|NP_084689.2| ribosomal protein S2 [Oenothera elata subsp. hookeri] gi|169142862|ref|YP_001687285.1| ribosomal protein S2 [Oenothera glazioviana] gi|169142947|ref|YP_001687369.1| ribosomal protein S2 [Oenothera biennis] gi|172045797|sp|Q9MTM2|RR2_OENEH RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573615|sp|B0Z4W2|RR2_OENBI RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573616|sp|B0Z546|RR2_OENGL RecName: Full=30S ribosomal protein S2, chloroplastic gi|159793120|gb|ABW98874.1| ribosomal protein S2 [Oenothera biennis] gi|159895474|gb|ABX10039.1| ribosomal protein S2 [Oenothera glazioviana] gi|162423687|emb|CAB67154.2| ribosomal protein S2 [Oenothera elata subsp. hookeri] Length = 236 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 126/226 (55%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI+ R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGIKKWNPRMAPYIYANRKGIHITNLTKTARFLAEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RGG+ L V TK QA+ V AA ++ + VN KWLGGM+TNW T + + RD E Sbjct: 67 RGGQFLIVGTKKQAAALVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHQFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TGRLNRLPKRDAAILKRQLSHLQTYLGGIKYMTGLPDILIILDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DT+ +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTDCDPDLADLPIPANDDAMASIRLILNKLVFAICEGRSSS 232 >gi|195928763|gb|ACG56061.1| ribosomal protein subunit 2 [Agalinis oligophylla] Length = 218 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 86/218 (39%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGHR WNPKM YI +R HI +L++T L + ++ D Sbjct: 1 NINLEEMLEAGVHFGHRTKKWNPKMAPYISAKRKGRHITNLTRTARFLSETCDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK A+D V AA R+ +CVN KWLGGM+TNW T +QKLRD E Sbjct: 61 SGKQFLIVGTKKTAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKLRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD SI + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNRLVFA 218 >gi|330998734|ref|ZP_08322463.1| ribosomal protein S2 [Parasutterella excrementihominis YIT 11859] gi|329576473|gb|EGG57985.1| ribosomal protein S2 [Parasutterella excrementihominis YIT 11859] Length = 247 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 103/235 (43%), Positives = 155/235 (65%), Gaps = 1/235 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R+LLE+G FGH+ W+PKM +YIF RN HII+L +TV +A + +++ A+ G Sbjct: 1 MRELLEAGAHFGHQTRFWSPKMSQYIFGSRNKIHIINLEKTVAKFDEAAKFLTNLAAQKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 ILFV TK + D ++ AKR+ V+ +WLGGM+TN+KTV S+++L+++E ++ + Sbjct: 61 TILFVGTKRTSRDAIVAEAKRAGMPYVDQRWLGGMLTNFKTVKVSLKRLKEMEQKVADGA 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L+ R+ +KL +A+ GI++M GLPD + VVD K+AIQEA +L IP+V Sbjct: 121 LEKMTKKEALDFTRELEKLNKAMGGIKEMNGLPDALVVVDVGYHKIAIQEANKLGIPVVG 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +VDTN NP VDYVIPGNDDS+R++AL+ A A ++G + K + Sbjct: 181 IVDTNHNPAGVDYVIPGNDDSARAVALYAKGFADAILEGKNKNLEDTVKAAKDSD 235 >gi|160177565|sp|A7M8Z3|RR2_CUSGR RecName: Full=Plastid 30S ribosomal protein S2 Length = 236 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LE+ V GH WNPKM YI +R HII+L++T L +A ++ + Sbjct: 7 NINLEDMLEARVHLGHSTQNWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFYAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RD E Sbjct: 67 KGKKFLIVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP Sbjct: 127 KGGLNNLPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN +P+L D IP NDD+ SI + + A G Sbjct: 187 TISLIDTNCDPNLSDIAIPANDDAMASIRFILNKLVFAICQG 228 >gi|320450762|ref|YP_004202858.1| 30S ribosomal protein S2 [Thermus scotoductus SA-01] gi|320150931|gb|ADW22309.1| 30S ribosomal protein S2 [Thermus scotoductus SA-01] Length = 262 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 110/260 (42%), Positives = 159/260 (61%), Gaps = 8/260 (3%) Query: 3 LP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +P +I++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + + D Sbjct: 1 MPVNISIKELLEAGVHFGHERKRWNPKFSRYIYAERNGIHIIDLQKTMVELERTFRFLED 60 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 RGG ILFV TK QA D + A+R+ VN +WLGGM+TN+KT+SQ + +L +LE Sbjct: 61 LAMRGGTILFVGTKKQAQDIIRMEAERAGMPYVNQRWLGGMLTNFKTISQRVNRLEELEN 120 Query: 122 LLNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E Q KKE++ ++ + D+L++ L G R + LPD +FVVD +E +A++EAR+L Sbjct: 121 LFASPEIQDRPKKEQVRLKHELDRLQKYLSGFRRLKRLPDAIFVVDPTKEAIAVREARKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+ DT+S+P+LVDY+IPGNDD+ RSI L I + G S Sbjct: 181 FIPVVALADTDSDPELVDYIIPGNDDAIRSIQLIVSRAVDLII------QARGGVVEPSP 234 Query: 241 GETVVHSKEGMQLEEDSQSS 260 +V E + + +S Sbjct: 235 SYALVEEAEKAEAQVQGESD 254 >gi|260591818|ref|ZP_05857276.1| ribosomal protein S2 [Prevotella veroralis F0319] gi|260536102|gb|EEX18719.1| ribosomal protein S2 [Prevotella veroralis F0319] Length = 270 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 97/270 (35%), Positives = 153/270 (56%), Gaps = 5/270 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDQLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEASEALKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA D V E A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 ARSGKKILFVATKKQAKDVVAEKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MKDGTFSNLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +DYVIP NDD+ S+ + A +G+ + + + +A Sbjct: 181 IPVFGIVDTNSDPKNIDYVIPANDDAKDSVEVILGACCEAIAEGLTERKAEKADEKANAE 240 Query: 242 ETVVHSKE----GMQLEEDSQSSESSVLDG 267 ++ V + + EE S++ + + Sbjct: 241 QSEVAPEAKPRRARKTEEASKAKKEASASE 270 >gi|159106789|ref|YP_001531209.1| ribosomal protein S2 [Cuscuta obtusiflora] gi|209573599|sp|A8W3H9|RR2_CUSOB RecName: Full=Plastid 30S ribosomal protein S2 gi|158142513|gb|ABW20554.1| ribosomal protein S2 [Cuscuta obtusiflora] Length = 236 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LE+ V GH WNPKM YI +R HII+L++T L +A ++ + Sbjct: 7 NIKLEDMLEARVHLGHSTQNWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFYAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RD E Sbjct: 67 KGKKFLIVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP Sbjct: 127 KGGLNNLPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN +P+L D IP NDD+ SI + + A G Sbjct: 187 TISLIDTNCDPNLSDIAIPANDDAMASIRFILNKLVFAICQG 228 >gi|82393630|gb|ABB72107.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M L + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELSCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLIVNTLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|169142712|ref|YP_001687139.1| ribosomal protein S2 [Oenothera argillicola] gi|169143033|ref|YP_001687453.1| ribosomal protein S2 [Oenothera parviflora] gi|209573614|sp|B0Z4M8|RR2_OENAR RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573617|sp|B0Z5D0|RR2_OENPA RecName: Full=30S ribosomal protein S2, chloroplastic gi|159792950|gb|ABW98706.1| ribosomal protein S2 [Oenothera argillicola] gi|159895559|gb|ABX10123.1| ribosomal protein S2 [Oenothera parviflora] Length = 236 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 80/226 (35%), Positives = 125/226 (55%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI+ R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGIKKWNPRMAPYIYANRKGIHITNLTKTARFLAEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK QA+ V AA ++ + VN KWLGGM+TNW T + + RD E Sbjct: 67 RGRQFLIVGTKKQAAALVARAAIKARCHYVNKKWLGGMLTNWSTTETRLHQFRDLRTEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 127 TGRLNRLPKRDAAILKRQLSHLQTYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DT+ +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTDCDPDLADLPIPANDDAMASIRLILNKLVFAICEGRSSS 232 >gi|195928701|gb|ACG56030.1| ribosomal protein subunit 2 [Agalinis strictifolia] gi|195928801|gb|ACG56080.1| ribosomal protein subunit 2 [Agalinis strictifolia] Length = 217 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGKHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T+ +A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLLVGTQKKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD+ SI + + Sbjct: 181 TICLIDTNCDPDLADLPIPANDDARSSIRFILNKLV 216 >gi|56122480|gb|AAV74365.1| Rps2 [Acorus gramineus] Length = 236 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH NP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NIDLEEMMEAGVHFGHGTRKLNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G L V TK +A+D V AA R+ + VN KWLGGM TNW T +Q RDL E Sbjct: 67 GGKHFLIVGTKKKAADSVASAAIRARCHYVNKKWLGGMSTNWSTTETRLQNFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++R+ L+ L GI+ M GLPD++ +VD + A++E L IP Sbjct: 127 AGKIDRLPKRDAAMLKRQLSTLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTNS+PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNSDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 230 >gi|297837969|ref|XP_002886866.1| ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata] gi|297332707|gb|EFH63125.1| ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata] Length = 225 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 80/223 (35%), Positives = 126/223 (56%), Gaps = 10/223 (4%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIDLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + L V TK++A+D V AA R+ + VN KWLGGM+TNW T + + K Sbjct: 67 RGKQFLIVGTKNKAADLVSRAAIRARCHYVNKKWLGGMLTNWSTTEKRLHK--------- 117 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K++ ++R+ +L+ L GI+ M GLPD++ ++D E A++E L IP Sbjct: 118 -GINRLPKRDAAVLKRQLSRLETYLGGIKYMTGLPDIVIILDQQEEYTALRECITLGIPT 176 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN NPDL D IP NDD+ SI + + A +G + Sbjct: 177 ISLIDTNCNPDLADISIPANDDAIASIRFILNKLVFAICEGRS 219 >gi|85057834|ref|YP_456750.1| 30S ribosomal protein S2 [Aster yellows witches'-broom phytoplasma AYWB] gi|123738891|sp|Q2NIS2|RS2_AYWBP RecName: Full=30S ribosomal protein S2 gi|84789939|gb|ABC65671.1| SSU ribosomal protein S2P [Aster yellows witches'-broom phytoplasma AYWB] Length = 269 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 100/224 (44%), Positives = 145/224 (64%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T +QLLESGV FGH WNPKM+ YIF RN HII+L +T ++KA Q + + Sbjct: 1 MAVVTTKQLLESGVYFGHATRKWNPKMKPYIFTSRNGIHIINLKKTSEEIEKAYQELLNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG+ LF+ TK Q + E A+RS QY V+ +WLGG +TN+KT+ + I+ L L + Sbjct: 61 ITSGGKALFLGTKKQIQSSIREEAQRSQQYYVDHRWLGGTLTNFKTILKRIELLHLLHKQ 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++RKRDKL++ L GI+DM LP +F+ D +E +A+ EAR+L Sbjct: 121 EEEGLWKKLPKKEVVKLKRKRDKLEKFLGGIKDMKNLPQAIFIFDPEKESIAVAEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I + +VDTN +PDLVDY+IP NDD+ R + L L+A+A + G Sbjct: 181 IKVFGIVDTNCDPDLVDYIIPANDDAIRGVKLIIWLMANACVQG 224 >gi|165918978|ref|ZP_02219064.1| ribosomal protein S2 [Coxiella burnetii RSA 334] gi|165917303|gb|EDR35907.1| ribosomal protein S2 [Coxiella burnetii RSA 334] Length = 313 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 155/227 (68%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + Sbjct: 1 MTDITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE Sbjct: 61 ASKRGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEER 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL Sbjct: 121 LENEENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEYERNAVQEANRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID + Sbjct: 181 GITVLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARS 227 >gi|193212094|ref|YP_001998047.1| 30S ribosomal protein S2 [Chlorobaculum parvum NCIB 8327] gi|238692613|sp|B3QLF7|RS2_CHLP8 RecName: Full=30S ribosomal protein S2 gi|193085571|gb|ACF10847.1| ribosomal protein S2 [Chlorobaculum parvum NCIB 8327] Length = 251 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 109/262 (41%), Positives = 157/262 (59%), Gaps = 12/262 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +F + Q+L +GV FGH W+PKM+ YIF E+N HIIDL +T+ M +AL+ I Sbjct: 1 MSKFQLEQMLRAGVHFGHLARRWSPKMKPYIFMEKNGVHIIDLKKTLVMADEALKAIEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G I+ V TK QA + E A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 61 ASTGREIMLVGTKKQAKVIIAEQAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIDRM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKERL + R++DKL R L GI +M LP +FVVD +E +AI+EAR L Sbjct: 121 ETDGTFDMITKKERLMLLREKDKLVRILGGIANMNRLPAALFVVDIKKEHIAIKEARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTN +PD VDY+IP NDD+ RSI L VA I+ + Q Sbjct: 181 IPIFAMVDTNCDPDEVDYIIPANDDAIRSIELMVKAVADTIIEARSLQEEQ--------- 231 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 E + E Q+EED++ + + Sbjct: 232 EAIAEMDE--QVEEDAEEASND 251 >gi|255507287|ref|ZP_05382926.1| 30S ribosomal protein S2 [Chlamydia trachomatis D(s)2923] gi|76443858|gb|ABA42633.1| S2 ribosomal protein [Chlamydia trachomatis] gi|82393651|gb|ABB72121.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 100/268 (37%), Positives = 154/268 (57%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + E A ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREVAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKEIALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLVVNVLKDAVIDAKKRSGIEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 241 VERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|156618899|ref|YP_001430035.1| ribosomal protein S2 [Cuscuta gronovii] gi|156555937|emb|CAM98321.1| ribosomal protein S2 [Cuscuta gronovii] Length = 236 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 83/222 (37%), Positives = 125/222 (56%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LE+ V GH WNPKM YI +R HI +L++T L +A ++ + Sbjct: 7 NINLEDMLEARVHLGHSTQNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFYAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RD E Sbjct: 67 KGKKFLIVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP Sbjct: 127 KGGLNNLPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++++DTN +P+L D IP NDD+ SI + + A G Sbjct: 187 TISLIDTNCDPNLSDIAIPANDDAMASIRFILNKLVFAICQG 228 >gi|39573654|dbj|BAD04078.1| ribosomal protein subunit 2 [Cistanche sinensis] Length = 236 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NIDLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + L V TK++A+ V A+ ++ +CV+ KWLGGM+TNW T + K RDL Sbjct: 67 KGKQFLIVGTKNKAAGSVAWASIKARCHCVSKKWLGGMLTNWSTTEMRLHKFRDLRIEQK 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 127 GGRLNRLPQRDVAAVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYAALRECTILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D +IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADILIPANDDAMSSIRLILNKLVFAICEGRS 230 >gi|195928813|gb|ACG56086.1| ribosomal protein subunit 2 [Agalinis tenuifolia] Length = 211 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 1/211 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 + ++DTN +PDL D IP NDD+ SI L Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLI 211 >gi|313679987|ref|YP_004057726.1| SSU ribosomal protein s2p [Oceanithermus profundus DSM 14977] gi|313152702|gb|ADR36553.1| SSU ribosomal protein S2P [Oceanithermus profundus DSM 14977] Length = 255 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 101/223 (45%), Positives = 149/223 (66%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +I++LLE+GV FGH WNPKM+R+I+ ERN IIDL +T+ +Q A + D A Sbjct: 4 NISIKELLEAGVHFGHETKRWNPKMKRFIYAERNGIFIIDLQKTLVQMQAACGYVEDLAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG IL+V TK QA + V A R VN +WLGGM+TN+KT+S +++L +LE+L + Sbjct: 64 RGGVILYVGTKKQAQEIVQIEADRVGMPYVNQRWLGGMLTNFKTISARVKRLEELEQLFD 123 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E+ KKE++ ++ + D+L++ L G R + LPD ++VVD +E +A+ EAR+L IP Sbjct: 124 SEDINERPKKEQVRLQHELDRLRKYLGGFRRLSRLPDALYVVDPTKEAIAVAEARKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IVA+ DT+S+PDL+D++IPGNDD+ RSI L + I+ Sbjct: 184 IVALADTDSDPDLIDHIIPGNDDAIRSIQLVTSRLTDVVIEAR 226 >gi|313886025|ref|ZP_07819763.1| ribosomal protein S2 [Porphyromonas asaccharolytica PR426713P-I] gi|332299459|ref|YP_004441380.1| ribosomal protein S2 [Porphyromonas asaccharolytica DSM 20707] gi|312924555|gb|EFR35326.1| ribosomal protein S2 [Porphyromonas asaccharolytica PR426713P-I] gi|332176522|gb|AEE12212.1| ribosomal protein S2 [Porphyromonas asaccharolytica DSM 20707] Length = 296 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 144/227 (63%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + QLLE+G FGH WNP M YIF ERN HIIDL +TV + + ++I + Sbjct: 1 MSQVSFDQLLEAGAHFGHMPRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDECAEIIKNM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +ILFV TK QA D V E AK V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 ASSGKKILFVGTKRQAKDAVAELAKSVGMPYVTERWPGGMLTNFPTIRKAVKKMAQIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+ERL ++R++ KL + L IRDM LP+ +FVVD RE +A++EA+RL Sbjct: 121 REDGTYNNLSKRERLQLDRQQAKLDKNLGSIRDMNRLPNALFVVDVMREHIAVREAQRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+ A+VDTN+NP +DYVIP NDDS+++I L + A +G Sbjct: 181 IPVFAIVDTNANPKDIDYVIPANDDSTQAIELIISAMCQAINEGQVE 227 >gi|225352152|ref|ZP_03743175.1| hypothetical protein BIFPSEUDO_03767 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157399|gb|EEG70738.1| hypothetical protein BIFPSEUDO_03767 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 274 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 102/251 (40%), Positives = 157/251 (62%), Gaps = 2/251 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + +L++G+ FGH+ WNPKM+++I +RN HII+L +++ M+ KA I T Sbjct: 1 MAQINMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA G +LFV TK QA + V A R V+ +WLGGM+TN++TVS+ + +L++LEE+ Sbjct: 61 VAHNGTVLFVGTKKQAQEAVSNQAVRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM 120 Query: 123 L--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + G TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L Sbjct: 121 DFTDVRGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+VDTN++P+ V+Y I NDD+ R I L L+A A +G+ + Sbjct: 181 GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERSGKAAKAEGET 240 Query: 241 GETVVHSKEGM 251 + + ++ + Sbjct: 241 EQPMAAWEKEL 251 >gi|195928697|gb|ACG56028.1| ribosomal protein subunit 2 [Agalinis heterophylla] Length = 218 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 123/210 (58%), Gaps = 1/210 (0%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V Sbjct: 9 EAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIV 68 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFT 131 TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 69 GTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLNRLP 128 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 129 KRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTN 188 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +PDL D IP NDD+ SI L + + A Sbjct: 189 CDPDLADISIPANDDAISSIRLILNKLVFA 218 >gi|218283545|ref|ZP_03489535.1| hypothetical protein EUBIFOR_02125 [Eubacterium biforme DSM 3989] gi|218215813|gb|EEC89351.1| hypothetical protein EUBIFOR_02125 [Eubacterium biforme DSM 3989] Length = 312 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 94/253 (37%), Positives = 157/253 (62%), Gaps = 4/253 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++++LE+GV FGH+ WNPKM+ +I+ RN +I+DL+QT ++ A + Sbjct: 12 MSIVSMKKMLENGVHFGHQTRRWNPKMKPFIYTSRNGVYIVDLNQTQAQIEAAYNELKAI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RGG++LFV TK QA++ V E A RS + VN +WLGG++TN++T+ + I++L ++EE+ Sbjct: 72 SERGGKVLFVGTKKQAAEVVEEQALRSGSFYVNKRWLGGLLTNFRTIQKRIKRLVEIEEM 131 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +TKKE+ N+ +++ KL+ +L GI++M LPD + V+D E AI EA++L Sbjct: 132 EASGKIEVYTKKEQANLRKEKAKLEGSLGGIKEMKKLPDALVVIDPKEEHNAIAEAKKLG 191 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A++DTN +P+ D+ I NDD+ RSI L ++A A +D D Sbjct: 192 IPVFAMLDTNCDPEDADFAIASNDDAVRSIKLVTTILADAIVDAKGGLLEMAYLDETEDD 251 Query: 242 ---ETVVHSKEGM 251 E V+ + E Sbjct: 252 VTMEDVIKNVEAQ 264 >gi|195928767|gb|ACG56063.1| ribosomal protein subunit 2 [Agalinis oligophylla] gi|195928769|gb|ACG56064.1| ribosomal protein subunit 2 [Agalinis oligophylla] Length = 218 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGHR WNPKM YI +R HI +L++T L + ++ D Sbjct: 1 NINLEEMLETGVHFGHRTKKWNPKMAPYISAKRKGRHITNLTRTARFLSETCDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK A+D V AA R+ +CVN KWLGGM+TNW T +QKLRD E Sbjct: 61 SGKQFLIVGTKKTAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKLRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD SI + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNRLVFA 218 >gi|290487176|gb|ADD29972.1| ribosomal protein S2 [Plumbago auriculata] Length = 236 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 1/226 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV GH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHLGHVAKKWNPRMSPYISTKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + L V TK +A+D V AA R+ + VN KWLGGM+TNW T + K RDL Sbjct: 67 KRKHFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 126 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M LPD++ +V E A++E L IP Sbjct: 127 AGRLACLPKRDAAVLKRQLFHLQTYLGGIKYMTRLPDIVIIVHQQEEYKALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTN +PDL D IP NDD+ S+ L + A +G + Sbjct: 187 TICLIDTNCDPDLADLSIPANDDARTSVRLILSKLVFAICEGRSSS 232 >gi|161831161|ref|YP_001597230.1| 30S ribosomal protein S2 [Coxiella burnetii RSA 331] gi|7388167|sp|Q9X5U8|RS2_COXBU RecName: Full=30S ribosomal protein S2 gi|189044934|sp|A9KBR3|RS2_COXBN RecName: Full=30S ribosomal protein S2 gi|189044935|sp|A9N8R0|RS2_COXBR RecName: Full=30S ribosomal protein S2 gi|4927945|gb|AAD33342.1|AF127534_1 30S ribosomal protein S2 [Coxiella burnetii] gi|161763028|gb|ABX78670.1| ribosomal protein S2 [Coxiella burnetii RSA 331] Length = 313 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 156/227 (68%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + + Sbjct: 1 MTDITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE Sbjct: 61 ASKRGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEER 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL Sbjct: 121 LENEENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID + Sbjct: 181 GITVLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARS 227 >gi|153207687|ref|ZP_01946334.1| ribosomal protein S2 [Coxiella burnetii 'MSU Goat Q177'] gi|120576383|gb|EAX33007.1| ribosomal protein S2 [Coxiella burnetii 'MSU Goat Q177'] Length = 313 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 155/227 (68%), Gaps = 2/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+RQLLE+GV FGH+ WNPKM YI+ R HII+L +T+P + AL+ + Sbjct: 1 MTDITMRQLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G++LFV TK A + V E A R V+ +WLGGM+TN+KT+ QSI++L++LEE Sbjct: 61 ASKRGKVLFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEER 120 Query: 123 LNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E G TKKE LN+ R+++KL L GI++MG LPD++FV+D E+ A+QEA RL Sbjct: 121 LENEENLVGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I ++ +VDTN++PD +D+VIPGNDD+ R+I L+C +A ID + Sbjct: 181 GITVLGIVDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARS 227 >gi|76443852|gb|ABA42629.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 282 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+GIR M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGIRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGIGILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|269101095|ref|YP_003289243.1| 30S ribosomal protein S2 [Ectocarpus siliculosus] gi|266631603|emb|CAV31274.1| Chloroplast 30S ribosomal protein S2 [Ectocarpus siliculosus] gi|270118733|emb|CAT18813.1| Chloroplast 30S ribosomal protein S2 [Ectocarpus siliculosus] Length = 231 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 89/228 (39%), Positives = 134/228 (58%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + QLL++GV FGH+ WNPKM YI+ ERN HI+DL QT L++A Sbjct: 1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ LFV TK QA+ + A++ + +N +WLGGM+TNW T+ I +L LEE Sbjct: 61 SAKKQTFLFVGTKKQAASLIALEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNALEEQ 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE N++++ +KL++ +G++ M +PD++ ++D RE +AI+EA L Sbjct: 121 EKINSFSNLPKKEAANLKKELEKLQKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPI++++DTN +PDL IPGNDDS RSI +A + G Sbjct: 181 IPIISILDTNCDPDLATIPIPGNDDSIRSIKYIIQNIADSICLGQQNS 228 >gi|188577162|ref|YP_001914091.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521614|gb|ACD59559.1| ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 262 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 102/272 (37%), Positives = 158/272 (58%), Gaps = 12/272 (4%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ W+P M +YIF R HII+L +TVP+ A+ +S + G Sbjct: 1 MRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQKRG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 ILF+ TK A + E A+R + +WLGG +TN++TV QS+ +L++LE + Sbjct: 61 TILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K E L++ R+R+KL +L GI++M LPD +FV+D E +AI+EA++L IP++A Sbjct: 121 FDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 VVDTN NP+LVDY IPGNDD+ R++ L+ A A ++G A + V Sbjct: 181 VVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA----------APNSASVR 230 Query: 247 SKE-GMQLEEDSQSSESSVLDGQEVAVVPELM 277 +E + ++ + + G++ A P Sbjct: 231 EEEFSAESADEGKGRRAPAKKGEKKADAPAAE 262 >gi|119025017|gb|ABA42631.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 284 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 161/279 (57%), Gaps = 1/279 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 A + E + L E+S G V + ++ + Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKGGGRVLLWADIDN 279 >gi|116515082|ref|YP_802711.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285522|sp|Q057T1|RS2_BUCCC RecName: Full=30S ribosomal protein S2 gi|116256936|gb|ABJ90618.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 241 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 102/214 (47%), Positives = 149/214 (69%), Gaps = 1/214 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ ++++GV FGH+ WNPKM+ +IF +N HII+L +T+P+ + A+ + T+ G Sbjct: 6 MKNMIKAGVHFGHQTRYWNPKMKPFIFGIKNKVHIINLEKTLPLFRLAINELKKTIKFNG 65 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS + A Q+ VN +WLGGM+TNWKTV QSI KL+DLE+ L+ Sbjct: 66 KILFVGTKRSASAAIKSIALSCNQFYVNHRWLGGMLTNWKTVRQSINKLKDLEKQSLDGT 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R +KL+ +L GI++MGGLPD +F++DT E +AI+EA L IP+ A Sbjct: 126 FDKLTKKEVLLRIRLLNKLENSLGGIKNMGGLPDAIFIIDTAYEHIAIREANHLGIPVFA 185 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +VDTNS+PD V+Y+IPGNDD+ RSI L+ ++++ Sbjct: 186 IVDTNSSPDGVNYIIPGNDDAIRSINLYLNILSD 219 >gi|237805031|ref|YP_002889185.1| 30S ribosomal protein S2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231273331|emb|CAX10246.1| SSU ribosomal protein S2 [Chlamydia trachomatis B/TZ1A828/OT] Length = 282 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 158/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESGV FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGVHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGIGILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|255530028|ref|YP_003090400.1| 30S ribosomal protein S2 [Pedobacter heparinus DSM 2366] gi|255343012|gb|ACU02338.1| ribosomal protein S2 [Pedobacter heparinus DSM 2366] Length = 274 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 99/237 (41%), Positives = 152/237 (64%), Gaps = 1/237 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH WNPKM YIF ERN HIIDL++T+ ++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWNPKMAPYIFMERNGIHIIDLNKTLTKTEEAASAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +ILFVATK QA + V + AK+ V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 61 VKSGRKILFVATKKQAKEIVADQAKKVNMPYVTERWLGGMLTNFATVRKSIKKMSNIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKERL I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTYSILSKKERLMIQRERIKLESLLGGIADLNRLPAAIFLIDVKKEHIAVSEALKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 IP A+VDTNS+P +D+ IP NDD+++SI+L D++ A +G+ + +T+ Sbjct: 181 IPTFAMVDTNSDPSNIDFPIPANDDATKSISLITDVIIKAIEEGLDERKREKDEETE 237 >gi|57229307|gb|AAW45731.1| ribosomal protein subunit 2 [Euphrasia disjuncta] Length = 214 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 1/214 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LLE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEELLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E Sbjct: 61 RGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 + ++DTN +P+L D IP NDD+ SI L + Sbjct: 181 TICLIDTNCDPNLADISIPANDDAISSIRLILNK 214 >gi|168048123|ref|XP_001776517.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672108|gb|EDQ58650.1| predicted protein [Physcomitrella patens subsp. patens] Length = 236 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 83/223 (37%), Positives = 133/223 (59%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++++ GV FGH+ WNPKM YIF ER HI++L+QT L +A ++++ + Sbjct: 7 NINLEEVMQVGVHFGHQARKWNPKMASYIFTERKGIHILNLTQTARFLSEACDLLANASS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ++L V TK QA+D V A+ ++ + +N KWLGGM+TNW T+ + +Q+ +DLE Sbjct: 67 KGKQVLIVGTKYQAADLVASASIKARCHYINQKWLGGMLTNWSTIEKRLQRFKDLENKEK 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ +L++ L GI+ M LPD++ ++D +E AI E L IP Sbjct: 127 TGVLNQLPKKEAATLKRQLVQLRKYLGGIKYMTSLPDIVIIIDQQKEITAINECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + +VDT+ +PDL D IP NDD+ SI + + A +G Sbjct: 187 TICLVDTDCDPDLTDIPIPANDDARASIRWILNKLTLAISEGR 229 >gi|149241276|pdb|2E5L|B Chain B, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via The Shine- Dalgarno Interaction Length = 227 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 104/223 (46%), Positives = 148/223 (66%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D Sbjct: 3 EITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAM 62 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L Sbjct: 63 RGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFA 122 Query: 125 K-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP Sbjct: 123 SPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++A+ DT+S+PDLVDY+IPGNDD+ RSI L I Sbjct: 183 VIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQAR 225 >gi|78103242|ref|YP_358565.1| ribosomal protein S2 [Phalaenopsis aphrodite subsp. formosana] gi|122239296|sp|Q3BAQ3|RR2_PHAAO RecName: Full=30S ribosomal protein S2, chloroplastic gi|58802772|gb|AAW82492.1| ribosomal protein S2 [Phalaenopsis aphrodite subsp. formosana] Length = 236 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 86/222 (38%), Positives = 125/222 (56%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+G+ FGH WNP+M YI +R HI +L+ T L +A ++ D + Sbjct: 7 NINLEEMMEAGIHFGHVTNKWNPRMAPYISSKRKGIHITNLTITARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG R L V TK +A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKRFLIVGTKKKAADLVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K + ++RK L+ L GI+ M GLPD++ +VD E ++E L IP Sbjct: 127 MGKLNRLPKGDAAMLKRKLSTLQAYLGGIKYMTGLPDIVIIVDQQEEYTVLRECVILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + ++DTN +PDL D IP NDD+ SI L + SA +G Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEG 228 >gi|162072725|gb|ABX82360.1| 30S ribosomal protein S2 [Chlamydia trachomatis A2497] Length = 284 Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 162/279 (58%), Gaps = 1/279 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKEIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 A + E + L E+S G V + ++ + Sbjct: 241 AERPAEEAIEELPLPTGEAQDEASSKGGGRVLLWADIDN 279 >gi|162072727|gb|ABX82361.1| 30S ribosomal protein S2 [Chlamydia trachomatis] Length = 284 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 161/279 (57%), Gaps = 1/279 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 A + E + L E+S G V + ++ + Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKGGGGVLLWADIDN 279 >gi|319760408|ref|YP_004124346.1| 30S ribosomal protein S20 [Candidatus Blochmannia vafer str. BVAF] gi|318039122|gb|ADV33672.1| 30S ribosomal protein S20 [Candidatus Blochmannia vafer str. BVAF] Length = 234 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 1/221 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +IR++L++GV FGH+ WNPKM+ +IF +N HIIDL +T+ M KAL + Sbjct: 2 MKKLSIREMLQAGVHFGHQTRYWNPKMKPFIFGVQNKIHIIDLDKTILMFNKALVELKKI 61 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK A + + A Q+ VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 62 TTLKGKILFVGTKRAARESIKSTALICGQFFVNHRWLGGMLTNWKTVRQSIKRLKELENQ 121 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + Q TKKE L ++ + L+ +L GI++MGGLPD +F V E +AI+EA L Sbjct: 122 SQDGTFQKLTKKEVLILKHELRGLENSLGGIKNMGGLPDAIFTVGAIHEHIAIKEANSLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IP+ A+VDT+SNPD VD++IPGNDD++R+I L+ ++V++ Sbjct: 182 IPVFAIVDTDSNPDGVDFIIPGNDDATRAINLYLNIVSNVI 222 >gi|148656150|ref|YP_001276355.1| 30S ribosomal protein S2 [Roseiflexus sp. RS-1] gi|209573679|sp|A5UUV2|RS2_ROSS1 RecName: Full=30S ribosomal protein S2 gi|148568260|gb|ABQ90405.1| SSU ribosomal protein S2P [Roseiflexus sp. RS-1] Length = 262 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 110/255 (43%), Positives = 159/255 (62%), Gaps = 2/255 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLESG FGH+ WNPKM YIF RN HIIDL +T+ L +A Q I +TVA Sbjct: 9 VSMRALLESGAHFGHQTKRWNPKMRPYIFTARNGIHIIDLQKTITGLTEAYQFIVETVAA 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ++LFV TK QA + + E A R+ Q+ V +WLGG +TN+ T+ + ++ L DLE+ Sbjct: 69 GQKVLFVGTKKQAQETIAEEATRAGQFYVTQRWLGGTLTNFATMRKRLRYLNDLEDQRAR 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E TK E L ++ + +KL + G++ M LP +F+VD ++E LA++EA + IP+ Sbjct: 129 GEFNKLTKAEALKLDAEIEKLNKVFGGMKTMDRLPGALFIVDPHKEALAVKEANKTGIPV 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN +PDL+DYVIP NDD+ RSI L +A AAI+G R+ S + AD AG Sbjct: 189 VAMVDTNCDPDLIDYVIPCNDDAIRSIRLIAAKIADAAIEGQNRRES-LQADVHGAGYEQ 247 Query: 245 VHSKEGMQLEEDSQS 259 + + + E ++ Sbjct: 248 EMTAQLIAREAEAVE 262 >gi|82393615|gb|ABB72097.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393657|gb|ABB72125.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 101/268 (37%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L +P++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGVPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|149277342|ref|ZP_01883484.1| 30S ribosomal subunit protein S2 [Pedobacter sp. BAL39] gi|149232219|gb|EDM37596.1| 30S ribosomal subunit protein S2 [Pedobacter sp. BAL39] Length = 276 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 102/274 (37%), Positives = 159/274 (58%), Gaps = 1/274 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH WNPKM YIF ERN HIIDL++T+ ++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWNPKMAPYIFMERNGIHIIDLNKTLTKTEEAASAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +ILFVATK QA + V + AK+ V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 61 VKSGRKILFVATKKQAKEIVADQAKKVNMPFVTERWLGGMLTNFATVRKSIKKMSNIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKERL I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTYSILSKKERLMIQRERIKLESLLGGIADLNRLPAAIFLIDVKKEHIAVSEALKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP A+VDTNS+P +D+ IP NDD+++SI+L D++ A +G+ + +T+ Sbjct: 181 IPTFAMVDTNSDPSNIDFPIPANDDATKSISLITDVIIKAIEEGLDERKREKDEETEKEA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + + + + D E E Sbjct: 241 VAAKAAADAPEAAAPGARRKKVSADASEEEGTSE 274 >gi|121604660|ref|YP_981989.1| 30S ribosomal protein S2 [Polaromonas naphthalenivorans CJ2] gi|166225293|sp|A1VN40|RS2_POLNA RecName: Full=30S ribosomal protein S2 gi|120593629|gb|ABM37068.1| SSU ribosomal protein S2P [Polaromonas naphthalenivorans CJ2] Length = 250 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 101/246 (41%), Positives = 153/246 (62%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R++LE+GV FGH+ W+PKM YIF RN HII+L +++PM Q+A++ A G Sbjct: 5 MREMLEAGVHFGHQTRFWDPKMAPYIFGHRNRIHIINLEKSLPMFQEAMKFAKQLTANRG 64 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 IL V TK A + V A+R+ V+ +WLGGM+TN+KTV SI++L++++ Sbjct: 65 TILMVGTKRTARETVAAEAQRAGIPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAGL 124 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +KKE+L +R+ +KL++ + GI+DM LPD +FV+D K+AI EA++L IP++ V Sbjct: 125 DSISKKEQLTFKREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAILEAKKLGIPLIGV 184 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 VDTN +P +DYVIPGNDDSS+++AL+ +A A I+G A + + G Sbjct: 185 VDTNHSPLGIDYVIPGNDDSSKAVALYARGIADAVIEGRASAMDDVVKAVSAEGSDEFVE 244 Query: 248 KEGMQL 253 E Sbjct: 245 VENAAA 250 >gi|195928781|gb|ACG56070.1| ribosomal protein subunit 2 [Agalinis pulchella] Length = 218 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 124/218 (56%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHYTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G + L V T +A++ V AA ++ + V KWLGGM+TNW T +QK RDL E Sbjct: 61 GGKQFLIVGTTKKAANLVAWAAIKARCHYVKKKWLGGMLTNWSTTETRLQKFRDLRIEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDDS SI L + + A Sbjct: 181 TICLIDTNCDPDLADLPIPANDDSRSSICLILNKLVFA 218 >gi|145219273|ref|YP_001129982.1| 30S ribosomal protein S2 [Prosthecochloris vibrioformis DSM 265] gi|189045004|sp|A4SDC1|RS2_PROVI RecName: Full=30S ribosomal protein S2 gi|145205437|gb|ABP36480.1| SSU ribosomal protein S2P [Chlorobium phaeovibrioides DSM 265] Length = 257 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 103/257 (40%), Positives = 145/257 (56%), Gaps = 4/257 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + +L +GV FGH W+PKM+ YIF E+N HIIDL +T+ + AL + Sbjct: 1 MSYFQLEDMLRAGVHFGHLARRWSPKMKPYIFMEKNGVHIIDLQKTLVLADNALNALDAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + + A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKNIIAAEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIDRM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKERL + R+R+KL R L GI M +P +F+VD +E +AI+EAR L Sbjct: 121 ETDGTYDMITKKERLMLGREREKLMRILGGIATMTRIPAALFIVDIKKEHIAIKEARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA---RQHSYMGADTK 238 IPI A+VDTN +PDLVDYVIP NDD+ RSI L VA ++ A Q D Sbjct: 181 IPIFAMVDTNCDPDLVDYVIPANDDAIRSIQLMVKAVADTIVNARALKVEQEVLAKMDEA 240 Query: 239 SAGETVVHSKEGMQLEE 255 E + E Sbjct: 241 DGSEAEPEDPAAPESAE 257 >gi|108773266|ref|YP_635714.1| ribosomal protein S2 [Chara vulgaris] gi|77157922|gb|ABA61963.1| ribosomal protein S2 [Chara vulgaris] Length = 241 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 89/222 (40%), Positives = 137/222 (61%), Gaps = 1/222 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + + ++LE+GV FGH++ WNP+M YIF ER HIIDL QT +L +A +++ Sbjct: 17 SKTNLEEMLEAGVHFGHQSHKWNPRMAPYIFSERKGVHIIDLIQTSNLLHEACDFLANAA 76 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + L V TK QASD + A +S + VN +WLGGM+TNW T+ IQ+L++LE Sbjct: 77 SNKKEFLLVGTKFQASDLIKSEALKSRCHYVNQRWLGGMLTNWMTIETRIQRLKNLETQE 136 Query: 124 N-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 KK+ +++R+ ++L++ L G++ M LPD++ +VD +E +A+QE R L I Sbjct: 137 KLGAFHHLPKKDAAHLKRQLNQLQKYLGGMKYMKNLPDVVIIVDQQKEIIAVQECRVLGI 196 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PI+A+VDTN +P++VD IP NDD+ SI + +A D Sbjct: 197 PIIALVDTNCDPEIVDIPIPANDDARSSIRWILSKLTAAIRD 238 >gi|300088116|ref|YP_003758638.1| 30S ribosomal protein S2 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527849|gb|ADJ26317.1| ribosomal protein S2 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 257 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 104/260 (40%), Positives = 156/260 (60%), Gaps = 6/260 (2%) Query: 3 LPQFT--IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 +P T I++LLESG FGH+ W+PKM++YIF +RN+ HIIDL +TV ML KAL I Sbjct: 1 MPTTTTNIKELLESGAHFGHQTSRWHPKMKKYIFTKRNDIHIIDLDKTVVMLDKALDFIE 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL-RDL 119 VA GG+IL V TK QA + V + +KR Y +N +W+GG++TN+ + I L R Sbjct: 61 QVVAEGGKILVVGTKKQAQEIVADESKRGGMYYINQRWIGGILTNFAAIQNRIDYLVRLE 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ E KKE+L + ++ +L + + G ++M LPD++F+VD +EK+A+ EA+R Sbjct: 121 DQHARGELARLPKKEQLKLAKEMLRLNKMMGGFKEMTALPDVIFIVDPTKEKIALAEAQR 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP+VA+VDTN NPD +DY IP NDD+ R+I L VA + + + + + Sbjct: 181 MGIPVVAIVDTNCNPDGIDYPIPANDDAMRAIKLVLSKVADTVLSANEQLTKF---EVEQ 237 Query: 240 AGETVVHSKEGMQLEEDSQS 259 VV E + +S Sbjct: 238 VETIVVDEDEASEAAGESDE 257 >gi|258647967|ref|ZP_05735436.1| ribosomal protein S2 [Prevotella tannerae ATCC 51259] gi|260851807|gb|EEX71676.1| ribosomal protein S2 [Prevotella tannerae ATCC 51259] Length = 278 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 99/278 (35%), Positives = 152/278 (54%), Gaps = 3/278 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTTFDQLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G RILFV+TK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++L Sbjct: 61 AKSGKRILFVSTKKQAKDIVAEKAAAVNMPYVTERWPGGMLTNFPTIRKAVKKMANIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL++ I D+ LP +F+VD +E +A++EA RL Sbjct: 121 TADGTFSNLSKREILQISRQRAKLEKNFGSIADLTRLPAALFIVDVMKEHIAVKEAHRLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P+ VD+VIP NDD+ +SI + D +A +G+ + + Sbjct: 181 IPVFGIVDTNSDPNSVDHVIPANDDAKQSIEVILDACCAAIAEGLEERKAEKVDQEAKEV 240 Query: 242 ETVVHSKEGMQL--EEDSQSSESSVLDGQEVAVVPELM 277 E K + E+ + E+ E P+ Sbjct: 241 EEKAPRKRTTRARKEKSEEGVEAESATTPETEEAPKAE 278 >gi|134302597|ref|YP_001122568.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis WY96-3418] gi|208780543|ref|ZP_03247882.1| ribosomal protein S2 [Francisella novicida FTG] gi|254372204|ref|ZP_04987696.1| ribosomal protein S2 [Francisella tularensis subsp. novicida GA99-3549] gi|254373687|ref|ZP_04989171.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548] gi|166225273|sp|A4IZU6|RS2_FRATW RecName: Full=30S ribosomal protein S2 gi|134050374|gb|ABO47445.1| ribosomal protein S2 [Francisella tularensis subsp. tularensis WY96-3418] gi|151569934|gb|EDN35588.1| ribosomal protein S2 [Francisella novicida GA99-3549] gi|151571409|gb|EDN37063.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548] gi|208743518|gb|EDZ89823.1| ribosomal protein S2 [Francisella novicida FTG] gi|328676309|gb|AEB27179.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida Fx1] Length = 239 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 158/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID + ++A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEAA 237 >gi|295311721|ref|YP_003587457.1| ribosomal protein S2 [Oncidium Gower Ramsey] gi|254833098|gb|ACT83101.1| ribosomal protein S2 [Oncidium Gower Ramsey] Length = 236 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L+ T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTNKWNPRMAPYISAKRKGIHITNLTITARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK +A+D V AA R+ + VN K LGGM+TNW T +QK RDL E Sbjct: 67 RGKKFLIVGTKKKAADLVASAAIRARCHYVNKKCLGGMLTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K + ++RK L+ L GI+ M GLPD++ +VD E ++E L IP Sbjct: 127 MGKLNCLPKGDAAMLKRKLSTLQAYLGGIKYMTGLPDIVIIVDQQEEYTVLRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + SA +G + Sbjct: 187 TICLIDTNCDPDLADISIPANDDAIASIRLILTKLVSAICEGRS 230 >gi|15605413|ref|NP_220199.1| 30S ribosomal protein S2 [Chlamydia trachomatis D/UW-3/CX] gi|255311507|ref|ZP_05354077.1| 30S ribosomal protein S2 [Chlamydia trachomatis 6276] gi|255317809|ref|ZP_05359055.1| 30S ribosomal protein S2 [Chlamydia trachomatis 6276s] gi|6831542|sp|O84687|RS2_CHLTR RecName: Full=30S ribosomal protein S2 gi|3329132|gb|AAC68275.1| S2 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|82393609|gb|ABB72093.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393612|gb|ABB72095.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393618|gb|ABB72099.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393621|gb|ABB72101.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393624|gb|ABB72103.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393627|gb|ABB72105.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393642|gb|ABB72115.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393645|gb|ABB72117.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393654|gb|ABB72123.1| ribosomal protein S2 [Chlamydia trachomatis] gi|82393660|gb|ABB72127.1| ribosomal protein S2 [Chlamydia trachomatis] gi|296436222|gb|ADH18396.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/9768] gi|296437150|gb|ADH19320.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/11222] gi|296438082|gb|ADH20243.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/11074] gi|297140583|gb|ADH97341.1| 30S ribosomal protein S2 [Chlamydia trachomatis G/9301] gi|297748811|gb|ADI51357.1| SSU ribosomal protein S2P [Chlamydia trachomatis D-EC] gi|297749691|gb|ADI52369.1| SSU ribosomal protein S2P [Chlamydia trachomatis D-LC] Length = 282 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 100/262 (38%), Positives = 155/262 (59%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I T+ + Sbjct: 7 LTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACIQTTIGQ 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 67 EKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLEA 126 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA +L IP++ Sbjct: 127 SNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGKLGIPVM 186 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + A Sbjct: 187 ALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRPAERPAE 246 Query: 246 HSKEGMQLEEDSQSSESSVLDG 267 + E + L E+S +G Sbjct: 247 EAVEELPLPTGEAQDEASSKEG 268 >gi|195928765|gb|ACG56062.1| ribosomal protein subunit 2 [Agalinis oligophylla] Length = 217 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 84/216 (38%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGHR WNPKM YI +R HI +L++T L + ++ D Sbjct: 1 NINLEEMLETGVHFGHRTKKWNPKMAPYISAKRKGRHITNLTRTARFLSETCDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK A+D V AA R+ +CVN KWLGGM+TNW T +QKLRD E Sbjct: 61 SGKQFLIVGTKKTAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKLRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVLKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD SI + + Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNRLV 216 >gi|241667399|ref|ZP_04754977.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875948|ref|ZP_05248658.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254841969|gb|EET20383.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 239 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 109/236 (46%), Positives = 159/236 (67%), Gaps = 3/236 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK QA D + AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +V+ Sbjct: 124 FGSLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID G+ R +T A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKAEETTEA 239 >gi|76789420|ref|YP_328506.1| 30S ribosomal protein S2 [Chlamydia trachomatis A/HAR-13] gi|237803110|ref|YP_002888304.1| 30S ribosomal protein S2 [Chlamydia trachomatis B/Jali20/OT] gi|123606673|sp|Q3KL14|RS2_CHLTA RecName: Full=30S ribosomal protein S2 gi|76167950|gb|AAX50958.1| SSU ribosomal protein S2P [Chlamydia trachomatis A/HAR-13] gi|76443846|gb|ABA42625.1| S2 ribosomal protein [Chlamydia trachomatis] gi|231274344|emb|CAX11139.1| SSU ribosomal protein S2 [Chlamydia trachomatis B/Jali20/OT] Length = 282 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 102/268 (38%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGIGILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S +G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKEG 268 >gi|195928731|gb|ACG56045.1| ribosomal protein subunit 2 [Agalinis harperi] Length = 218 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 1/213 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R +HI +L++T L +A ++ D Sbjct: 1 NINLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGSHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ +R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVAKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 + ++DTN +PDL D IP NDD+ SI L + Sbjct: 181 TICLIDTNCDPDLADISIPANDDARSSIRLILN 213 >gi|150010070|ref|YP_001304813.1| 30S ribosomal protein S2 [Parabacteroides distasonis ATCC 8503] gi|262382628|ref|ZP_06075765.1| 30S ribosomal protein S2 [Bacteroides sp. 2_1_33B] gi|298374430|ref|ZP_06984388.1| ribosomal protein S2 [Bacteroides sp. 3_1_19] gi|301308102|ref|ZP_07214056.1| ribosomal protein S2 [Bacteroides sp. 20_3] gi|166225291|sp|A6LHM7|RS2_PARD8 RecName: Full=30S ribosomal protein S2 gi|149938494|gb|ABR45191.1| ribosomal protein S2 [Parabacteroides distasonis ATCC 8503] gi|262295506|gb|EEY83437.1| 30S ribosomal protein S2 [Bacteroides sp. 2_1_33B] gi|298268798|gb|EFI10453.1| ribosomal protein S2 [Bacteroides sp. 3_1_19] gi|300833572|gb|EFK64188.1| ribosomal protein S2 [Bacteroides sp. 20_3] Length = 278 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 155/262 (59%), Gaps = 2/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+GV FGH WNP M YIF ERN HIIDL +TV + +A +V+ + Sbjct: 1 MSRVNFDQLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G ++LFVATK QA V + A V +W GGM+TN+ T+ ++I+K+ ++++ Sbjct: 61 AKQGKKVLFVATKKQAKQVVADKAASVGMPYVIERWPGGMLTNFPTIRKAIKKMATIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 TKDGTFDNLSKREKLQITRQRAKLEKTLGSIVDLTRLPSALFVVDVMKEHIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNSNP+ +DYVIP NDD+++S+ + + A +G+ + + D ++A Sbjct: 181 IPVFGMVDTNSNPNNIDYVIPANDDATKSVEVILGAICEAMNEGLQERKAEK-IDAEAAE 239 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 E ++ + ++ + Sbjct: 240 EAPKRERKAKAAVKKERTKKED 261 >gi|156501608|ref|YP_001427673.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica FTNF002-00] gi|156252211|gb|ABU60717.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 236 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 157/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 1 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 61 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D N+E +AIQEA++L I +VA Sbjct: 121 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID + ++A Sbjct: 181 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEAA 234 >gi|328950714|ref|YP_004368049.1| ribosomal protein S2 [Marinithermus hydrothermalis DSM 14884] gi|328451038|gb|AEB11939.1| ribosomal protein S2 [Marinithermus hydrothermalis DSM 14884] Length = 251 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +I++LLE+GV FGH WNPKM++YI+ ERN IIDL +T+ ++K + D A Sbjct: 4 NVSIKELLEAGVHFGHETKRWNPKMKKYIYAERNGVFIIDLQKTLVEIEKTCNFVQDLAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG IL+V TK QA + + A R VN +WLGGM+TN+KT+S + +L +LE L Sbjct: 64 RGGVILYVGTKKQAQEIIQLEADRVGMPYVNQRWLGGMLTNFKTISARVNRLEELEALFE 123 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E + KKE++ ++ + D+LK+ L G R + LPD +FVVD +E +A++EAR+L IP Sbjct: 124 SEEIKERPKKEQVRLKHELDRLKKYLSGFRRLKRLPDALFVVDPTKELIAVREARKLGIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IVA+ DT+S+PDL+DY+IPGNDD+ RSI L + I Sbjct: 184 IVALADTDSDPDLIDYIIPGNDDAIRSIQLITSRLTDVII 223 >gi|89255658|ref|YP_513019.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica LVS] gi|115314159|ref|YP_762882.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica OSU18] gi|167009901|ref|ZP_02274832.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica FSC200] gi|254367049|ref|ZP_04983085.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica 257] gi|290953223|ref|ZP_06557844.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica URFT1] gi|295313591|ref|ZP_06804180.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica URFT1] gi|122325797|sp|Q0BNT9|RS2_FRATO RecName: Full=30S ribosomal protein S2 gi|122999778|sp|Q2A5I2|RS2_FRATH RecName: Full=30S ribosomal protein S2 gi|209573719|sp|A7N9R4|RS2_FRATF RecName: Full=30S ribosomal protein S2 gi|89143489|emb|CAJ78665.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica LVS] gi|115129058|gb|ABI82245.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica OSU18] gi|134252875|gb|EBA51969.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica 257] Length = 239 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 157/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID + ++A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEAA 237 >gi|209573718|sp|B0U101|RS2_FRAP2 RecName: Full=30S ribosomal protein S2 Length = 239 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 109/236 (46%), Positives = 160/236 (67%), Gaps = 3/236 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK QA D + AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +V+ Sbjct: 124 FESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID G+ R +T A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKAEETTEA 239 >gi|118496840|ref|YP_897890.1| 30S ribosomal protein S2 [Francisella tularensis subsp. novicida U112] gi|194324476|ref|ZP_03058248.1| ribosomal protein S2 [Francisella tularensis subsp. novicida FTE] gi|166225272|sp|A0Q4H1|RS2_FRATN RecName: Full=30S ribosomal protein S2 gi|118422746|gb|ABK89136.1| 30S ribosomal protein S2 [Francisella novicida U112] gi|194321311|gb|EDX18797.1| ribosomal protein S2 [Francisella tularensis subsp. novicida FTE] Length = 239 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 108/234 (46%), Positives = 157/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID + ++ Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEAV 237 >gi|1518660|gb|AAB07069.1| ribosomal protein S2 [Chlamydia muridarum] Length = 281 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 157/259 (60%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I TV Sbjct: 6 ELTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLAQLKKAVSCIQKTVE 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L ++E L Sbjct: 66 QGKSILFVGTKKQAKQIIKEAAIECGEFFASERWLGGMLTNMATIRNSVKTLNNIEIDLA 125 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N TKKE + ++ KL L+G+R M LP L+ V+D E++A++EA +L IP+ Sbjct: 126 SSNSVLTKKETALLAKRHRKLLNNLEGVRHMNSLPGLLVVIDPGYERIAVREAGKLGIPV 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 186 MALVDTNCDPTPINHVIPCNDDSIKSIRLIVNALKDAIIDTKKRSGFEILSPVRPIERPA 245 Query: 245 VHSKEGMQLEEDSQSSESS 263 EG+ L ++Q+ +S Sbjct: 246 EEIVEGLPLPNEAQNDANS 264 >gi|328675395|gb|AEB28070.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida 3523] Length = 239 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 107/234 (45%), Positives = 157/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPYVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +V+ Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNS P+ +DY+IPGNDD+ +SI+ + A A ID + ++A Sbjct: 184 IVDTNSTPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEAA 237 >gi|82393648|gb|ABB72119.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 285 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 102/268 (38%), Positives = 156/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + E + L E+S G Sbjct: 241 AERPAEEAVEELPLPTGEAQDEASSKKG 268 >gi|297622137|ref|YP_003710274.1| 30S ribosomal protein S2 [Waddlia chondrophila WSU 86-1044] gi|297377438|gb|ADI39268.1| 30S ribosomal protein S2 [Waddlia chondrophila WSU 86-1044] Length = 290 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 102/274 (37%), Positives = 163/274 (59%), Gaps = 7/274 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L + TI+ LLE+G FGH+ WNPKM+R+IF ERN +IIDL++T+ ++ A +++ + Sbjct: 16 LAEITIKNLLEAGAHFGHQTSRWNPKMKRFIFEERNGLYIIDLAKTLQQVRNAAEIVKEC 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V + ILFV TK QA V E A+ ++ V +WLGGM+TN T+ QSI+KL +E+ Sbjct: 76 VKKHKSILFVGTKKQAKGVVKELAEECGEFYVCERWLGGMLTNLSTIRQSIKKLDRIEKQ 135 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + +G TKKE + +++ KL + L G+R M LP L+ VVD ++E +A+ EA++L I Sbjct: 136 IAAGGEGLTKKELSLLTKEQLKLDKNLSGVRSMRKLPGLVVVVDPSKEHIAVAEAKKLGI 195 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI------ARQHSYMGAD 236 P++ +VDTN +PD +DYVI NDD+ +SI L + + +R+ D Sbjct: 196 PVMGLVDTNCDPDPIDYVIACNDDALKSIKLIINTLTDVIAKEKNEMRLVSRKEGSEEED 255 Query: 237 TKSAGETVVHSKEGMQL-EEDSQSSESSVLDGQE 269 K E V + + +ED++ +++ +E Sbjct: 256 KKIGEEIAVGKVDLAKSGKEDAELKKTAGAAKEE 289 >gi|326200270|gb|ADZ52309.1| ribosomal protein S2 [Asclepias syriaca] Length = 236 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV GH WNPKM YIF R HI +L +T L + ++ D + Sbjct: 7 NINLEEMMEAGVHLGHGTKKWNPKMRPYIFARRKGIHITNLIRTARFLSETCDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V T ++A+ V AA ++ + VN KWLGGM+TNW T + + RD E Sbjct: 67 RGKQFLIVGTNNKAAASVAWAAIKARCHYVNKKWLGGMLTNWSTTETRLHRFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M LPD++ +VD + + A++E L IP Sbjct: 127 TGRLNRLPKRDAAVLKRQLSRLQTYLGGIKYMTELPDIVIIVDQHEDYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLADLSIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|256838880|ref|ZP_05544390.1| ribosomal protein S2 [Parabacteroides sp. D13] gi|256739799|gb|EEU53123.1| ribosomal protein S2 [Parabacteroides sp. D13] Length = 292 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 95/263 (36%), Positives = 155/263 (58%), Gaps = 2/263 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + + QLLE+GV FGH WNP M YIF ERN HIIDL +TV + +A +V+ + Sbjct: 14 TMSRVNFDQLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKN 73 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 +G ++LFVATK QA V + A V +W GGM+TN+ T+ ++I+K+ +++ Sbjct: 74 LAKQGKKVLFVATKKQAKQVVADKAASVGMPYVIERWPGGMLTNFPTIRKAIKKMATIDK 133 Query: 122 LL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + +K+E+L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 134 MTKDGTFDNLSKREKLQITRQRAKLEKTLGSIVDLTRLPSALFVVDVMKEHIAVREANRL 193 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ +VDTNSNP+ +DYVIP NDD+++S+ + + A +G+ + + D ++A Sbjct: 194 GIPVFGMVDTNSNPNNIDYVIPANDDATKSVEVILGAICEAMNEGLQERKAEK-IDAEAA 252 Query: 241 GETVVHSKEGMQLEEDSQSSESS 263 E ++ + ++ + Sbjct: 253 EEAPKRERKAKAAVKKERTKKED 275 >gi|195928687|gb|ACG56023.1| ribosomal protein subunit 2 [Agalinis aphylla] Length = 218 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ Sbjct: 1 NINLEEMLEAGVHFGHGIRKWNPKMAPYISAKRKGRHITNLTRTARFLSEACGLVFHAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 MGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNCDPDLADLSIPANDDARSSIRLILNKLVFA 218 >gi|254368535|ref|ZP_04984551.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp. holarctica FSC022] gi|157121438|gb|EDO65629.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp. holarctica FSC022] Length = 239 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 157/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID + ++A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKANEAA 237 >gi|210633131|ref|ZP_03297698.1| hypothetical protein COLSTE_01611 [Collinsella stercoris DSM 13279] gi|210159285|gb|EEA90256.1| hypothetical protein COLSTE_01611 [Collinsella stercoris DSM 13279] Length = 264 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G FGH+ WNPKM+ +IF ERNN +I+DL QT+ KA + +T A Sbjct: 20 KINIRTLLEAGCHFGHQTRRWNPKMKPFIFGERNNIYILDLKQTIVEADKAYTFLKETAA 79 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GG++LFV TK QA + V AA+R+ +N +WLGGM+TN+ T+ I +L +LE ++ Sbjct: 80 KGGKVLFVGTKKQAQEAVKTAAERANMPYINQRWLGGMLTNFVTIRSRINRLEELEGMVA 139 Query: 125 KENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE+ + ++ KL+ L G R++ P +FV+DT RE+ AI+EA+RL IP Sbjct: 140 DGSMALRGKKEQAVLGKELAKLQANLGGARELKSTPAALFVIDTKREENAIKEAKRLGIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VA++DTNS+PD+VDY IP NDD+ +I L +L A A + G ++ Sbjct: 200 VVALIDTNSDPDVVDYGIPCNDDAISAIQLMSELFADACLAGSGKEQ 246 >gi|268315585|ref|YP_003289304.1| 30S ribosomal protein S2 [Rhodothermus marinus DSM 4252] gi|262333119|gb|ACY46916.1| ribosomal protein S2 [Rhodothermus marinus DSM 4252] Length = 276 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 107/250 (42%), Positives = 154/250 (61%), Gaps = 2/250 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I +LL++G FGH WNPKM +IF ERN HIIDL QT +L +A + + Sbjct: 17 HRVSIEELLKAGAHFGHLTSRWNPKMRPFIFMERNGIHIIDLVQTQQLLDRAAEAAARFA 76 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +G +ILFV TK QA D V + A+ Q V +WLGG +TN++T+ QSI+++ +L + Sbjct: 77 RQGKKILFVGTKKQARDIVRKYAEACGQPYVVERWLGGTLTNFQTIRQSIRRMEELARME 136 Query: 124 NKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + KKERL R+R+KL+R L GI M LP +F+VD RE +A+ EAR+L I Sbjct: 137 EEGILDQLKKKERLMKRREREKLERTLGGIAQMAKLPGALFIVDVVREHIAVSEARKLGI 196 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PI+A+VDTN++P+L+DY IP NDD+ RSI L ++A+A +G A+Q A K+ E Sbjct: 197 PIIAIVDTNADPELIDYPIPANDDAVRSIELITSVIANAITEG-AKQREQEEASRKAERE 255 Query: 243 TVVHSKEGMQ 252 E + Sbjct: 256 KRAADAEAAK 265 >gi|326798858|ref|YP_004316677.1| ribosomal protein S2 [Sphingobacterium sp. 21] gi|326549622|gb|ADZ78007.1| ribosomal protein S2 [Sphingobacterium sp. 21] Length = 274 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 106/274 (38%), Positives = 165/274 (60%), Gaps = 8/274 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T ++LL++GV FGH W+PKM +YIF ERN HIIDL++T+ L++A I Sbjct: 1 MARTTYQELLDAGVHFGHLTRKWDPKMAKYIFMERNGIHIIDLNKTLAKLEEAASAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFVATK QA D V E AK V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 61 VKSGRKVLFVATKKQAKDIVAEQAKAVNMPYVTERWLGGMLTNFATVRKSIKKMSNIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE+L I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTYDVLSKKEKLMIQRERIKLENLLGGIADLNRLPAALFIIDVKKEHIAVSEALKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI---ARQHSYMGADTK 238 IP A+VDTNS+P +D+ IP NDD+++SI L +++ A I+G+ R Sbjct: 181 IPTFAMVDTNSDPTNIDFPIPANDDATKSITLITNVIKQAIIEGLEERKRDKEEEAEKEA 240 Query: 239 SAGETVVHSKEGMQLE----EDSQSSESSVLDGQ 268 +A + V S E E + ++ + DG+ Sbjct: 241 AAAKAKVDSGEEPAAEVAPKRERKAEATEAKDGE 274 >gi|195928787|gb|ACG56073.1| ribosomal protein subunit 2 [Agalinis purpurea] Length = 218 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NIDLEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKRAADLVAWAAIKTRCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNGDPDLADLSIPANDDARSSIHLILNKLVFA 218 >gi|228470250|ref|ZP_04055154.1| ribosomal protein S2 [Porphyromonas uenonis 60-3] gi|228307993|gb|EEK16868.1| ribosomal protein S2 [Porphyromonas uenonis 60-3] Length = 297 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 95/227 (41%), Positives = 143/227 (62%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+G FGH WNP M YIF ERN HIIDL +TV + + ++I + Sbjct: 1 MSLVSFDQLLEAGAHFGHMPRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDECAEIIKNM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +ILFV TK QA + + E AK V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 ASSGKKILFVGTKRQAKEPIAELAKSVGMPYVTERWPGGMLTNFPTIRKAVKKMGQIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+ERL ++R++ KL + L IRDM LP+ +FVVD RE +AI+EA+RL Sbjct: 121 REDGTYNNLSKRERLQLDRQQAKLDKNLGSIRDMNRLPNALFVVDVMREHIAIREAQRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP+ A+VDTN+NP +DYVIP NDDS+++I L + A +G Sbjct: 181 IPVFAIVDTNANPRDIDYVIPANDDSTQAIELIVSAMCQAINEGQVE 227 >gi|229496631|ref|ZP_04390345.1| ribosomal protein S2 [Porphyromonas endodontalis ATCC 35406] gi|229316528|gb|EEN82447.1| ribosomal protein S2 [Porphyromonas endodontalis ATCC 35406] Length = 289 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 165/290 (56%), Gaps = 18/290 (6%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T QLL++G FGH+ WNP M YIF ERNNTHIIDL +TV ++++ ++I + Sbjct: 1 MASITFEQLLKAGAHFGHQPRKWNPAMAPYIFMERNNTHIIDLHKTVAKIEESTEIIRNM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK Q + V E AK V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 ARNGKKILFVATKKQVKEPVEELAKSVGMPYVVERWPGGMLTNFPTIRKAVKKMVQIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L +ER+R KL++ L I+DM LP +FVVD +E +A++EA RL Sbjct: 121 KEDGTYSNLSKREKLQVERQRAKLEKTLGSIQDMNRLPSALFVVDIIKEHIAVREATRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTN++P LVDYVIP NDDS ++ L + SA +G+ S + + Sbjct: 181 IPVFAIVDTNADPKLVDYVIPANDDSRETVELIMGAMCSAISEGLTEYKSQ-NVEEEVKD 239 Query: 242 ETVVH----------------SKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E V SKE + ++ S+E+ + A E Sbjct: 240 EAAVEGARSGRRTRAGARRERSKETSKEAPEATSAETEAPSVEAEAPAAE 289 >gi|195928779|gb|ACG56069.1| ribosomal protein subunit 2 [Agalinis pulchella] Length = 217 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHYTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G + L V T +A++ V AA ++ + V KWLGGM+TNW T +QK RDL E Sbjct: 61 GGKQFLIVGTTKKAANLVAWAAIKARCHYVKKKWLGGMLTNWSTTETRLQKFRDLRIEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDDS SI L + + Sbjct: 181 TICLIDTNCDPDLADLPIPANDDSRSSICLILNKLV 216 >gi|82393663|gb|ABB72129.1| ribosomal protein S2 [Chlamydia trachomatis] Length = 282 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 101/268 (37%), Positives = 157/268 (58%), Gaps = 1/268 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLGQLEKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHHKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 A + + + L E+S +G Sbjct: 241 AERPAEEAVKELPLPTGEAQDEASSKEG 268 >gi|296123429|ref|YP_003631207.1| ribosomal protein S2 [Planctomyces limnophilus DSM 3776] gi|296015769|gb|ADG69008.1| ribosomal protein S2 [Planctomyces limnophilus DSM 3776] Length = 247 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 89/226 (39%), Positives = 141/226 (62%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ LE+G+ +GHR WNPKM YI+ RN HIID+ +TV L +A + + Sbjct: 1 MSDIVVKDFLEAGIHYGHRTSRWNPKMRPYIYGRRNLIHIIDIKETVRGLLRAKRYLQKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILF TK QASD + E A ++ V+ +WLGG+ TN++T+ I++L +L++L Sbjct: 61 ASQGSLILFCGTKKQASDAIREYANQAGMPFVDYRWLGGVFTNFRTIRGRIKRLEELDQL 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E + ++KK R + R+R K+ R LDG+R+M LP+ M +VD +E A+ EA+ + Sbjct: 121 FESGEIETYSKKRRSTLLRERTKMTRNLDGLRNMNRLPEAMVIVDPRKEHNALHEAKLVG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 I +A++DT+ +PD VD IPGNDDS RSI L + + ++G + Sbjct: 181 IKTIALLDTDCDPDQVDLPIPGNDDSIRSIQLVLQHLTESILEGKS 226 >gi|464712|sp|P35014|RR2_GALSU RecName: Full=30S ribosomal protein S2, chloroplastic gi|629440|pir||S39513 ribosomal protein S2, chloroplast - red alga (Cyanidium caldarium) chloroplast gi|429171|emb|CAA48018.1| ribosomal protein 2 [Galdieria sulphuraria] Length = 233 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 84/230 (36%), Positives = 128/230 (55%), Gaps = 2/230 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M T+ +LL + V GHR WNPKM +I+ ERN HIIDL QT +L +A + Sbjct: 1 MTTSVVTLSELLAARVHLGHRFNKWNPKMVSFIYAERNKVHIIDLVQTAFLLGEACDYVK 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +G + LFV T+ + + + E A+R + +N +WLGG++TNW T+ +Q L E Sbjct: 61 LLAKKGKKFLFVGTRQELNTILAEEAERCNSFYINQRWLGGLLTNWVTIKSRVQALEKKE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 KKE ++++ DKL+R +GIR M LPD++ ++D ++ A+QE +L Sbjct: 121 S--EGFFNSLPKKESARLKKELDKLRRYFNGIRKMNTLPDVVIIIDQRKDLTAVQECNKL 178 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP + +VDTN NPD+VD IP NDD+ S+ L + +G + Sbjct: 179 NIPTICIVDTNCNPDIVDLPIPANDDAICSVKLILGKLVDFIKEGQIERE 228 >gi|195928783|gb|ACG56071.1| ribosomal protein subunit 2 [Agalinis purpurea] gi|195928785|gb|ACG56072.1| ribosomal protein subunit 2 [Agalinis purpurea] Length = 218 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NIDLEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKRAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNGDPDLADLSIPANDDARSSIHLILNKLVFA 218 >gi|21674595|ref|NP_662660.1| 30S ribosomal protein S2 [Chlorobium tepidum TLS] gi|25009198|sp|Q8KBK6|RS2_CHLTE RecName: Full=30S ribosomal protein S2 gi|21647794|gb|AAM73002.1| ribosomal protein S2 [Chlorobium tepidum TLS] Length = 249 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 104/232 (44%), Positives = 146/232 (62%), Gaps = 2/232 (0%) Query: 3 LP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +P +F + ++L +GV FGH WNPKM+ YIF E+N HIIDL +T+ M ++AL+ I Sbjct: 1 MPTKFQLEEMLRAGVHFGHLARRWNPKMKPYIFMEKNGVHIIDLKKTLVMAEEALKAIEA 60 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + G I+ V TK QA + E A+R+ V +WLGGM+TN+ T+ QSI+++ +E Sbjct: 61 IASTGREIMLVGTKKQAKVIIAEQAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIER 120 Query: 122 LL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + TKKERL + R++DKL R L GI +M LP +FVVD +E +A++EAR L Sbjct: 121 METDGTFDMITKKERLMLIREKDKLVRILGGIANMNRLPAALFVVDIKKEHIAVKEARSL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IPI A+VDTN +PD VDYVIP NDD+ RSI L VA ++ Q Sbjct: 181 GIPIFAMVDTNCDPDEVDYVIPANDDAIRSIDLMVKAVADTILEARTLQVEQ 232 >gi|328955479|ref|YP_004372812.1| SSU ribosomal protein S2P [Coriobacterium glomerans PW2] gi|328455803|gb|AEB06997.1| SSU ribosomal protein S2P [Coriobacterium glomerans PW2] Length = 274 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 101/244 (41%), Positives = 146/244 (59%), Gaps = 6/244 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + + LLE+G FGH+ W+PKM+ YIF ERN +I+DL QT+ +A + Sbjct: 4 KINVHTLLEAGCHFGHQTRRWDPKMKPYIFGERNGIYILDLKQTIINADQAYSFVKRVAK 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ++L V TK QA + V AA+R+ +N +WLGGM+TN+ T+ I ++ +LE ++ Sbjct: 64 SG-KLLIVGTKKQAQEAVRTAAERAGMPYINQRWLGGMLTNFMTIRSRIDRMEELETMVE 122 Query: 125 KENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE+ + ++ KL+ L G RD+ GLP +FV+DT RE+ AI+EARRL IP Sbjct: 123 DGRMAVLPKKEQAVLGKQLSKLQTNLGGARDLKGLPQALFVIDTKREENAIREARRLNIP 182 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH----SYMGADTKS 239 +VA++DTNS+PD V Y IP NDD+ SI L C+L+A A G ++ MG S Sbjct: 183 VVALIDTNSDPDEVTYGIPCNDDAISSITLMCELIADACQAGSGKEEISESEMMGEPAPS 242 Query: 240 AGET 243 A E Sbjct: 243 ASEP 246 >gi|125987742|sp|Q1ACN3|RR2_CHAVU RecName: Full=30S ribosomal protein S2, chloroplastic Length = 230 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 89/222 (40%), Positives = 137/222 (61%), Gaps = 1/222 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + + ++LE+GV FGH++ WNP+M YIF ER HIIDL QT +L +A +++ Sbjct: 6 SKTNLEEMLEAGVHFGHQSHKWNPRMAPYIFSERKGVHIIDLIQTSNLLHEACDFLANAA 65 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + L V TK QASD + A +S + VN +WLGGM+TNW T+ IQ+L++LE Sbjct: 66 SNKKEFLLVGTKFQASDLIKSEALKSRCHYVNQRWLGGMLTNWMTIETRIQRLKNLETQE 125 Query: 124 N-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 KK+ +++R+ ++L++ L G++ M LPD++ +VD +E +A+QE R L I Sbjct: 126 KLGAFHHLPKKDAAHLKRQLNQLQKYLGGMKYMKNLPDVVIIVDQQKEIIAVQECRVLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 PI+A+VDTN +P++VD IP NDD+ SI + +A D Sbjct: 186 PIIALVDTNCDPEIVDIPIPANDDARSSIRWILSKLTAAIRD 227 >gi|270284841|ref|ZP_06194235.1| 30S ribosomal protein S2 [Chlamydia muridarum Nigg] gi|270288870|ref|ZP_06195172.1| 30S ribosomal protein S2 [Chlamydia muridarum Weiss] gi|301336221|ref|ZP_07224423.1| 30S ribosomal protein S2 [Chlamydia muridarum MopnTet14] Length = 280 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 102/263 (38%), Positives = 157/263 (59%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MLSCELTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLAQLKKAVSCIQ 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV +G ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L ++E Sbjct: 61 KTVEQGKSILFVGTKKQAKQIIKEAAIECGEFFASERWLGGMLTNMATIRNSVKTLNNIE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L N TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA +L Sbjct: 121 IDLASSNSVLTKKETALLAKRHRKLLNNLEGVRHMNSLPGLLVVIDPGYERIAVAEAGKL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP++A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 181 GIPVMALVDTNCDPTPINHVIPCNDDSIKSIRLIVNALKDAIIDTKKRSGFEILSPVRPI 240 Query: 241 GETVVHSKEGMQLEEDSQSSESS 263 EG+ L ++Q+ +S Sbjct: 241 ERPAEEIVEGLPLPNEAQNDANS 263 >gi|284039590|ref|YP_003389520.1| ribosomal protein S2 [Spirosoma linguale DSM 74] gi|283818883|gb|ADB40721.1| ribosomal protein S2 [Spirosoma linguale DSM 74] Length = 277 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 102/259 (39%), Positives = 154/259 (59%), Gaps = 2/259 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LL++GV FGH W+P+M YIF E+N HIIDL++TV L +A I Sbjct: 1 MAQIEYKDLLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNKTVAALDEACNAIKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +++FVATK QA + V E A+R V +W GGM+TN+ T+ +S++K++ L+++ Sbjct: 61 VRSGRKVMFVATKKQAQEIVSEEARRLKMPYVTDRWQGGMLTNFATIRKSLKKMQTLDKM 120 Query: 123 LNKENQGFT--KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E + K+ERL R ++KL+R L GI D+ LP +FVVD RE +A+ EA RL Sbjct: 121 LKDEETVKSIAKRERLTRSRDKEKLERVLGGIADLTRLPAALFVVDVKREHIAVAEAHRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+ DTNSNP+ VD+ IP NDD+ +SI+L + A +G+ + Sbjct: 181 GIPVFAMCDTNSNPEEVDFAIPANDDAYKSISLITLAIGKAIEEGLMERKQDKDDQRVQE 240 Query: 241 GETVVHSKEGMQLEEDSQS 259 E S++ Q + + +S Sbjct: 241 EEEAKRSEDLAQAKAEGES 259 >gi|15834676|ref|NP_296435.1| 30S ribosomal protein S2 [Chlamydia muridarum Nigg] gi|7404454|sp|P71145|RS2_CHLMU RecName: Full=30S ribosomal protein S2 gi|7190090|gb|AAF38940.1| ribosomal protein S2 [Chlamydia muridarum Nigg] Length = 281 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 156/259 (60%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I TV Sbjct: 6 ELTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLAQLKKAVSCIQKTVE 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L ++E L Sbjct: 66 QGKSILFVGTKKQAKQIIKEAAIECGEFFASERWLGGMLTNMATIRNSVKTLNNIEIDLA 125 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA +L IP+ Sbjct: 126 SSNSVLTKKETALLAKRHRKLLNNLEGVRHMNSLPGLLVVIDPGYERIAVAEAGKLGIPV 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +++VIP NDDS +SI L + + A ID R + + + Sbjct: 186 MALVDTNCDPTPINHVIPCNDDSIKSIRLIVNALKDAIIDTKKRSGFEILSPVRPIERPA 245 Query: 245 VHSKEGMQLEEDSQSSESS 263 EG+ L ++Q+ +S Sbjct: 246 EEIVEGLPLPNEAQNDANS 264 >gi|227536279|ref|ZP_03966328.1| ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33300] gi|300772318|ref|ZP_07082188.1| 30S ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33861] gi|227243886|gb|EEI93901.1| ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33300] gi|300760621|gb|EFK57447.1| 30S ribosomal protein S2 [Sphingobacterium spiritivorum ATCC 33861] Length = 270 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 94/268 (35%), Positives = 159/268 (59%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH W+PKM +YIF ERN HIIDL++T+ L++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWDPKMAKYIFMERNGIHIIDLNKTLTKLEEAASAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFVATK QA + + + AK V +WLGGM+TN+ TV +SI+K+ +++++ Sbjct: 61 VKSGRKVLFVATKKQAKEIIAQQAKEVNMPFVTERWLGGMLTNFATVRKSIKKMSNIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE+L I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 QKDGTYDVLSKKEKLMIQRERIKLESLLGGIADLNRLPAALFIIDVKKEHIAVSEAIKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP A+VDTNS+P +D+ IP NDD+++SI+L +++ A +G+ + + + Sbjct: 181 IPTFAMVDTNSDPTNIDFPIPANDDATKSISLIAGIISKAIQEGLDERKRDKEDEAEKEA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + +++ + ++ Sbjct: 241 AAAKAQVDNGGEAQEANAGAKRPRKAKD 268 >gi|34811530|pdb|1PNS|B Chain B, Crystal Structure Of A Streptomycin Dependent Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pns, Contains The 30s Subunit, Two Trnas, And One Mrna Molecule. The 50s Ribosomal Subunit Is In File 1pnu. gi|34811586|pdb|1PNX|B Chain B, Crystal Structure Of The Wild Type Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx, Contains Only Molecules Of The 30s Ribosomal Subunit. The 50s Subunit Is In The Pdb File 1pny. gi|56966324|pdb|1VOQ|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966377|pdb|1VOS|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966430|pdb|1VOV|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966483|pdb|1VOX|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966536|pdb|1VOZ|B Chain B, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|300508606|pdb|3MR8|B Chain B, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508661|pdb|3MS0|B Chain B, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s). gi|322812551|pdb|3PYN|B Chain B, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812604|pdb|3PYQ|B Chain B, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|322812657|pdb|3PYS|B Chain B, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812710|pdb|3PYU|B Chain B, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 234 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D RGG Sbjct: 1 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L E Sbjct: 61 TILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP++A Sbjct: 121 IEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + DT+S+PDLVDY+IPGNDD+ RSI L I Sbjct: 181 LADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQAR 220 >gi|189345967|ref|YP_001942496.1| 30S ribosomal protein S2 [Chlorobium limicola DSM 245] gi|189340114|gb|ACD89517.1| ribosomal protein S2 [Chlorobium limicola DSM 245] Length = 256 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 105/264 (39%), Positives = 153/264 (57%), Gaps = 11/264 (4%) Query: 3 LPQ-FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +PQ F + ++L +GV FGH W PKM+ YIF E+N HIIDL +T+ + +AL+ + Sbjct: 1 MPQQFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTLVLADEALKALEA 60 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + G I+FV TK QA + E A+R+ V +WLGGM+TN+ T+ QSI+++ ++ Sbjct: 61 IASTGREIMFVGTKKQAKHIIAEEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIDR 120 Query: 122 LL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + TKKERL + R+R+KL R L GI +M LP +F+VD +E +AI+EAR L Sbjct: 121 METDGTFDMITKKERLMLAREREKLMRILGGIANMTRLPAALFIVDIKKEHIAIKEARSL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI A+VDTN +P+ VDYVIP NDD+ RSI L A ++ A K Sbjct: 181 GIPIFAMVDTNCDPETVDYVIPANDDAIRSIQLMVKAAAETVVNARA---------LKVE 231 Query: 241 GETVVHSKEGMQLEEDSQSSESSV 264 E + E +E ++S Sbjct: 232 QEVLADMDEQESEDEGEADVDASA 255 >gi|224510685|pdb|3FIC|B Chain B, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 30s Subunit And The Ligands Length = 235 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D RGG Sbjct: 1 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+SQ + +L +LE L E Sbjct: 61 TILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPE 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP++A Sbjct: 121 IEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIA 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + DT+S+PDLVDY+IPGNDD+ RSI L I Sbjct: 181 LADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQAR 220 >gi|223940224|ref|ZP_03632084.1| ribosomal protein S2 [bacterium Ellin514] gi|223891111|gb|EEF57612.1| ribosomal protein S2 [bacterium Ellin514] Length = 257 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 101/233 (43%), Positives = 148/233 (63%), Gaps = 2/233 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M++ +++LLE+GV FGH+ WNPKM+ +IF RN HIIDLS+T+ LQ A ++ Sbjct: 1 MSI-NVGVKELLEAGVHFGHQTKRWNPKMKPFIFDARNGIHIIDLSKTLAGLQAACDFLT 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 TV++GGR+LFV TK QA + V E AK Q+ V +WLGG +TN++TV +SI +++ +E Sbjct: 60 TTVSKGGRVLFVGTKKQAQEAVKETAKECGQFFVTERWLGGTLTNFQTVKKSIARMKQIE 119 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + + K+E+ I R+ + + DGIR M P MF+VD RE A+ EARR Sbjct: 120 KMETDGGINQYVKQEQSAIRREHARQFKYFDGIRSMDKYPAAMFLVDIKREHNAVAEARR 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 L IP+VA+VDTN +PDLVD+ I GNDD+ RS+ + + V A + Sbjct: 180 LNIPVVALVDTNCDPDLVDFPIAGNDDAIRSVRMVLNTVGQVITQAQAEYEAK 232 >gi|68566004|sp|Q85FN0|RR2_ADICA RecName: Full=30S ribosomal protein S2, chloroplastic gi|48995172|gb|AAP29381.3| ribosomal protein S2 [Adiantum capillus-veneris] Length = 235 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 1/223 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + ++ +G+ FGH+ WNPKM YIF ER HI+DL+QT +L +A ++ D Sbjct: 8 IDLEGMMAAGIHFGHQTQRWNPKMSPYIFTERKGVHILDLTQTARLLSEACDLVFDAAVE 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G L V TK+Q +D ++ AA +S + VN KWL G +TNW T +++ + L+ + Sbjct: 68 GKEFLMVGTKNQVTDLIVSAALKSQCHYVNEKWLAGTLTNWVTTETRLRRFQHLQTGGDL 127 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E K+E ++ + +LK+ L GI+ M LPD+ + D + + +A++E L IP Sbjct: 128 GEFDRLPKREAAILKGQLVRLKKCLGGIQYMSDLPDIAIITDQHEQSIALKECSILGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IPGNDD+ SI D +A A +G + Sbjct: 188 ICIVDTDCDPDLVDVPIPGNDDARSSIRWILDKLALAISEGRS 230 >gi|169142782|ref|YP_001687207.1| ribosomal protein S2 [Aneura mirabilis] gi|209573634|sp|B0YPM1|RR2_ANEMR RecName: Full=30S ribosomal protein S2, plastid gi|153973808|gb|ABS54468.1| ribosomal protein S2 [Aneura mirabilis] Length = 239 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 86/228 (37%), Positives = 137/228 (60%), Gaps = 1/228 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+G+ FGH+ WNPKM +IF ER + HII+L+QT L +A + ++ + Sbjct: 7 DIHLEEMMEAGIHFGHQVRKWNPKMAPFIFTERKSVHIINLTQTARFLSEACDLAANAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG + L V TK QA+D V+ AA + + +N KWLGGM+TNW T+ +QK R+LE E L Sbjct: 67 RGKQFLIVGTKYQAADLVVSAASGARCHYINQKWLGGMLTNWSTIETRLQKFRNLEKEKL 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE + ER+ +L++ GI+ M LPD++ ++D +E AI+E L IP Sbjct: 127 AGIFERLPKKEVADSERRLSRLRKYFGGIKYMTALPDIVIIIDQRKEFTAIRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 + +VDT+ +P++ D IP NDD+ SI + + A +G ++ Sbjct: 187 TICLVDTDCDPNVTDIPIPANDDARASIKWISNKLTLAICEGRLNSNA 234 >gi|315271282|gb|ACO46255.2| putative 30S ribosomal protein S2 [Deinococcus deserti VCD115] Length = 251 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 100/248 (40%), Positives = 151/248 (60%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D Sbjct: 1 MSYISMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQVDRSFDYIKDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RGG ILFV TK QA + V A+R+ V S+WLGGM+TN+KT+ I +L +L+EL Sbjct: 61 SERGGVILFVGTKKQAQEIVELEARRTGMPFVTSRWLGGMLTNFKTMRTRIDRLTELDEL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K ER+ + +R++L+R + GIR M LPD +FVVD +E +A+QEA +L Sbjct: 121 FESGRINDRLKAERIKLGAERERLQRFVGGIRKMTRLPDAIFVVDPTKEVIAVQEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+ DT+S+PD++DY++PGNDD+ RSI L + ++ + Sbjct: 181 IPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLLVEARGGGEDVAAEGMEQGA 240 Query: 242 ETVVHSKE 249 +T ++E Sbjct: 241 QTDEQAEE 248 >gi|167626818|ref|YP_001677318.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596819|gb|ABZ86817.1| 30S ribosomal protein S2 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 257 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 109/236 (46%), Positives = 160/236 (67%), Gaps = 3/236 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 22 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 81 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK QA D + AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 82 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGT 141 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +V+ Sbjct: 142 FESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 201 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID G+ R +T A Sbjct: 202 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKAEETTEA 257 >gi|319953572|ref|YP_004164839.1| ssu ribosomal protein s2p [Cellulophaga algicola DSM 14237] gi|319422232|gb|ADV49341.1| SSU ribosomal protein S2P [Cellulophaga algicola DSM 14237] Length = 362 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 97/269 (36%), Positives = 156/269 (57%), Gaps = 2/269 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T L++A + + Sbjct: 1 MA-NKIVVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKLEEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E + + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVSEKVSKVNMPYITERWPGGMLTNFVTIRKAVKKMATID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I +M LP +F+VDT RE +A++EA + Sbjct: 120 RMKKDGTFLTLSKKERLQVDRLRAKLEKNLGSISEMTRLPGALFIVDTMREHIAVKEAIK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+ DTNS+P L+DY+IP NDD+S+SI V A +G++ + S + + Sbjct: 180 LNIPIFAMADTNSDPRLLDYIIPSNDDASKSIEAILTHVTDAIAEGLSERKSEKQSGKEG 239 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 + + + + E +E+ + Sbjct: 240 GDDAEKAAPKKKKAVETEAKAETKTEEAP 268 >gi|229815415|ref|ZP_04445747.1| hypothetical protein COLINT_02463 [Collinsella intestinalis DSM 13280] gi|229808948|gb|EEP44718.1| hypothetical protein COLINT_02463 [Collinsella intestinalis DSM 13280] Length = 301 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + IR LLE+G FGH+ WNPKM+ +IF ERNN +I+DL QT+ KA + +T A Sbjct: 57 KINIRTLLEAGCHFGHQTRRWNPKMKPFIFGERNNIYILDLKQTIVEADKAYTFLKETAA 116 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GG++LFV TK QA + V AA+R+ +N +WLGGM+TN+ T+ I +L +LE ++ Sbjct: 117 KGGKVLFVGTKKQAQEAVKAAAERANMPYINQRWLGGMLTNFVTIRSRINRLEELEGMVA 176 Query: 125 KENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE+ + ++ KL+ L G R++ P +FV+DT RE+ AI+EA+RL IP Sbjct: 177 DGSMALRGKKEQAVLGKELAKLQANLGGARELKSTPAALFVIDTKREENAIKEAKRLGIP 236 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +VA++DTNS+PD+VDY IP NDD+ +I L +L A A + G ++ Sbjct: 237 VVALIDTNSDPDVVDYGIPCNDDAISAIQLMSELFADACLAGSGKEQ 283 >gi|195928819|gb|ACG56089.1| ribosomal protein subunit 2 [Agalinis viridis] gi|195928821|gb|ACG56090.1| ribosomal protein subunit 2 [Agalinis viridis] Length = 217 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 81/216 (37%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGIHITNLTRTARFLSETCNLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTHKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLRKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 181 TICLIDTNCDPDLADISIPANDDARSSIRLILNKLV 216 >gi|325110869|ref|YP_004271937.1| 30S ribosomal protein S2P [Planctomyces brasiliensis DSM 5305] gi|324971137|gb|ADY61915.1| SSU ribosomal protein S2P [Planctomyces brasiliensis DSM 5305] Length = 249 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 100/257 (38%), Positives = 150/257 (58%), Gaps = 17/257 (6%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +L++GV FGH++ WNPKM YI+ RN HIIDL +TV L +A + + Sbjct: 1 MADINVKDILDAGVHFGHQSSRWNPKMRPYIYGRRNRIHIIDLKETVRGLIRAQRYLQKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA+ + E A+ V+ +WLGGM+TN++T+ I++L +LE L Sbjct: 61 SSQGSLILFVGTKRQAAGTIRECAQACGMPYVSERWLGGMLTNYRTIRNRIKRLEELEGL 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F+KK + + R+ K+ R L GIRD+ LP+ + V+D +E A++EA L Sbjct: 121 QESGQMATFSKKAQSKLMREYRKINRNLGGIRDLNRLPEAIVVIDPTKEHNAVKEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 I +VA++DT+S+PD VD IPGNDDS RSI L +A A +AG Sbjct: 181 IKVVALIDTDSDPDEVDLPIPGNDDSMRSIRLIVSHLADAV----------------AAG 224 Query: 242 ETVVHSKEGMQLEEDSQ 258 ++ V KE Q +ED Sbjct: 225 KSTVPQKEDAQQQEDDA 241 >gi|83952013|ref|ZP_00960745.1| 30S ribosomal protein S2 [Roseovarius nubinhibens ISM] gi|83837019|gb|EAP76316.1| 30S ribosomal protein S2 [Roseovarius nubinhibens ISM] Length = 260 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 123/239 (51%), Positives = 174/239 (72%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVPML AL I DT A+GGR+LFV TK QA+ V EAA++ Sbjct: 1 MGEFIYGARNGIHIMDLTQTVPMLDAALNAIRDTAAKGGRVLFVGTKRQAAGPVAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 SAQ+ +N +WLGG +TNW+TVSQSI++L++++E L +G TKKERL IER ++KL+ + Sbjct: 61 SAQFYMNHRWLGGTLTNWQTVSQSIKRLKEIDEALEGGAEGLTKKERLGIERDQEKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG+PD++FV+D +E LA+ EA +L IP+VAVVDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGVPDMLFVIDVKKEALAVAEANKLGIPVVAVVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 R+I+L+CDLV+ AA+DG++ Q G D + E V +E + S E++ D Sbjct: 181 RAISLYCDLVSRAALDGMSAQMGAAGVDLGALAEAPVEETLSDGVETGNVSDETAHNDA 239 >gi|187932155|ref|YP_001892140.1| 30S ribosomal protein S2 [Francisella tularensis subsp. mediasiatica FSC147] gi|187713064|gb|ACD31361.1| 30S ribosomal protein S2 [Francisella tularensis subsp. mediasiatica FSC147] Length = 239 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 110/236 (46%), Positives = 159/236 (67%), Gaps = 3/236 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L +GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +I+FV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KIIFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID G+ R + A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEADQA 239 >gi|255546731|ref|XP_002514424.1| 30S ribosomal protein S2, putative [Ricinus communis] gi|223546420|gb|EEF47920.1| 30S ribosomal protein S2, putative [Ricinus communis] Length = 317 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 123/219 (56%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++++GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 94 VQEMMKAGVHFGHGTRKWNPRMAPYISTKRKGIHITNLTRTAHFLSEACDLVFDAASRRK 153 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKE 126 + L V TK++A+D V AA R+ + VN KWLGG++TNW T IQK RD E Sbjct: 154 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRIQKFRDLRMEQKTGR 213 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K + +ER+ L+ L I+ M GLPD++ +VD + ++E L IP + Sbjct: 214 LNRLPKGDAARLERQLAHLQTYLGRIKYMMGLPDIVIIVDQQEDYTTLRECITLGIPTIC 273 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN + DL D IP NDD+ SI L + + A +G Sbjct: 274 LIDTNCDLDLADISIPANDDAIASIRLILNKLVFAICEG 312 >gi|34540206|ref|NP_904685.1| 30S ribosomal protein S2 [Porphyromonas gingivalis W83] gi|188995452|ref|YP_001929704.1| 30S ribosomal protein S2 [Porphyromonas gingivalis ATCC 33277] gi|61215673|sp|Q7MX41|RS2_PORGI RecName: Full=30S ribosomal protein S2 gi|238689265|sp|B2RL62|RS2_PORG3 RecName: Full=30S ribosomal protein S2 gi|34396518|gb|AAQ65584.1| ribosomal protein S2 [Porphyromonas gingivalis W83] gi|188595132|dbj|BAG34107.1| putative 30S ribosomal protein S2 [Porphyromonas gingivalis ATCC 33277] Length = 281 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 96/225 (42%), Positives = 143/225 (63%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + QLLE+G FGH WNP M YIF ERN+ HIIDL +TV + +A +VI Sbjct: 1 MSRISFDQLLEAGAHFGHLKRKWNPAMAPYIFMERNDIHIIDLHKTVAKVDEAAEVIKGM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA + + E AK V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKNGKKILFVATKKQAKEPIAELAKSVGMPYVVERWPGGMLTNFPTIRKAVKKMTQIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R KL++ L I DM LP +FVVD +E +A++EA RL Sbjct: 121 TADGTFDNLSKREKLQITRQRAKLEKTLGSIADMNRLPSALFVVDVMKEHIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP+ A+VDTNS+P L+DYVIP NDD+ ++I L + A +G+ Sbjct: 181 IPVFAMVDTNSDPSLIDYVIPSNDDALKAIELIVGTMCQAINEGL 225 >gi|226356269|ref|YP_002786009.1| 30S ribosomal protein S2 [Deinococcus deserti VCD115] gi|259494993|sp|C1CVN8|RS2_DEIDV RecName: Full=30S ribosomal protein S2 Length = 252 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 100/248 (40%), Positives = 151/248 (60%), Gaps = 1/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D Sbjct: 2 MSYISMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQVDRSFDYIKDL 61 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RGG ILFV TK QA + V A+R+ V S+WLGGM+TN+KT+ I +L +L+EL Sbjct: 62 SERGGVILFVGTKKQAQEIVELEARRTGMPFVTSRWLGGMLTNFKTMRTRIDRLTELDEL 121 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K ER+ + +R++L+R + GIR M LPD +FVVD +E +A+QEA +L Sbjct: 122 FESGRINDRLKAERIKLGAERERLQRFVGGIRKMTRLPDAIFVVDPTKEVIAVQEANKLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+ DT+S+PD++DY++PGNDD+ RSI L + ++ + Sbjct: 182 IPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLLVEARGGGEDVAAEGMEQGA 241 Query: 242 ETVVHSKE 249 +T ++E Sbjct: 242 QTDEQAEE 249 >gi|305665268|ref|YP_003861555.1| 30S ribosomal protein S2 [Maribacter sp. HTCC2170] gi|88710022|gb|EAR02254.1| 30S ribosomal protein S2 [Maribacter sp. HTCC2170] Length = 374 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 98/271 (36%), Positives = 156/271 (57%), Gaps = 2/271 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++LLE+GV FGH WNP M YI+ ERN H+I+L +TV L +A + + Sbjct: 1 MAKVEVKELLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTVAKLDEANEALKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V + + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGRKILFVATKKQAKDIVADKVANVNMPYITERWPGGMLTNFVTIRKAVKKMASIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKERL ++R R KL++ L I +M LP +F+VDT RE +A++EA++L Sbjct: 121 KKDGTFLTLSKKERLQVDRLRAKLEKNLGSISEMTRLPGALFIVDTMREHIAVKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT-KSA 240 IPI A+VDTN +P VD+V+P NDD+S+SI + V A +G+A + + D K+ Sbjct: 181 IPIFAMVDTNCDPRDVDFVVPSNDDASKSIEIIMTQVTDAVAEGLAERKAEKQGDAPKAK 240 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 E ++ ++E E A Sbjct: 241 TEAPKKEAPKVKAAPAPAATEEKPAKKVEKA 271 >gi|195928773|gb|ACG56066.1| ribosomal protein subunit 2 [Agalinis paupercula] Length = 217 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NIDLEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKRAADLVAWAAIKTRCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 181 TICLIDTNGDPDLADLSIPANDDARSSIHLILNKLV 216 >gi|88802060|ref|ZP_01117588.1| 30S ribosomal protein S2 [Polaribacter irgensii 23-P] gi|88782718|gb|EAR13895.1| 30S ribosomal protein S2 [Polaribacter irgensii 23-P] Length = 279 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 97/269 (36%), Positives = 157/269 (58%), Gaps = 2/269 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + I++LL++GV FGH WNP M YI+ ERN HIIDL +T +++ + ++ Sbjct: 1 MAKVNIQELLDNGVHFGHLTRKWNPNMAPYIYTERNGVHIIDLYKTAAKIEETSEALNKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA D V E AK + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 ANSGRKILFVATKKQAKDIVAEKAKAINMPYITERWPGGMLTNFVTIRKAVKKMALIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R+KL++ L I DM LP +F+VD +E +A+ EA++L Sbjct: 121 KTDGSFDALSKREKLQINRQREKLEKNLGSISDMTRLPGALFIVDIKKEHIAVAEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTNS+P VDYVIP NDD+S+SI V A +G++ + + K Sbjct: 181 IPIFAMVDTNSDPRQVDYVIPANDDASKSIDKVLSFVTDAIAEGLSDRKADK-EKVKDTK 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E E + + ++ E + ++ + Sbjct: 240 EVAAPETEEVAPKAETPKVEEAKVEETKA 268 >gi|195928771|gb|ACG56065.1| ribosomal protein subunit 2 [Agalinis paupercula] Length = 217 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NIDLEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKRAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 181 TICLIDTNGDPDLADLSIPANDDARSSIHLILNKLV 216 >gi|54113283|gb|AAV29275.1| NT02FT0086 [synthetic construct] Length = 239 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 157/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSVGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMSFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID + ++A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEAA 237 >gi|159161242|ref|YP_001542520.1| ribosomal protein S2 [Cuscuta exaltata] gi|209573598|sp|A8W3B3|RR2_CUSEX RecName: Full=Plastid 30S ribosomal protein S2 gi|158938667|gb|ABW83684.1| ribosomal protein S2 [Cuscuta exaltata] Length = 236 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP++ +I +R HI +L++T L +A ++ D Sbjct: 7 NINLEEMMGAGVHFGHGTRKWNPQIAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAR 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V T ++A+ V A++++ + VN KWL GM+TNW T + K RD E Sbjct: 67 RGKKFLIVGTNNKAAYSVARASRKARCHYVNKKWLAGMLTNWSTTETRLNKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 127 KGGLNHLPKRDATMFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +P+L D IP NDD+ SI + + A +G Sbjct: 187 TICLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEGR 229 >gi|195928789|gb|ACG56074.1| ribosomal protein subunit 2 [Agalinis purpurea] Length = 216 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NIDLEEMLEAGVHLGHGTRNWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKRAADLVAWAAIKTRCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 181 TICLIDTNGDPDLADLSIPANDDARSSIHLILNKLV 216 >gi|119357802|ref|YP_912446.1| 30S ribosomal protein S2 [Chlorobium phaeobacteroides DSM 266] gi|166225258|sp|A1BHZ5|RS2_CHLPD RecName: Full=30S ribosomal protein S2 gi|119355151|gb|ABL66022.1| SSU ribosomal protein S2P [Chlorobium phaeobacteroides DSM 266] Length = 252 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 101/254 (39%), Positives = 147/254 (57%), Gaps = 3/254 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +F + ++L +GV FGH W PKM+ YIF E+N HIIDL +T+ + AL + Sbjct: 1 MSRFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTLVLADDALNALEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKRIISAEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNSIDRM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKERL + R+++KL R L GI M LP +FVVD +E +AI+EAR L Sbjct: 121 ETDGTFDMITKKERLMLVREKEKLMRILGGIATMTRLPAALFVVDIKKEHIAIKEARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTN +P+LVD++IP NDD+ RSI L VA ++ +R+ Sbjct: 181 IPIFAMVDTNCDPELVDFIIPANDDAIRSIQLMVKAVADTIVN--SRELKVEQEVLAGMD 238 Query: 242 ETVVHSKEGMQLEE 255 E + EG E Sbjct: 239 EEDGDAVEGDAAGE 252 >gi|194337369|ref|YP_002019163.1| ribosomal protein S2 [Pelodictyon phaeoclathratiforme BU-1] gi|194309846|gb|ACF44546.1| ribosomal protein S2 [Pelodictyon phaeoclathratiforme BU-1] Length = 255 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 100/226 (44%), Positives = 144/226 (63%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + ++L +GV FGH W PKM+ YIF E+N HIIDL +TV + +AL+ + Sbjct: 1 MSHFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTVVLADEALKALEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + E A+R+ V +WLGGM+TN++T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKHIIAEQAERAGMPYVCERWLGGMLTNFQTIRQSIRRMNSIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKERL + R+++KL R L GI M LP +F+VD +E +AI+EAR L Sbjct: 121 ATDGTYDMITKKERLMLGREKEKLMRILGGIATMTRLPAALFIVDIKKEHIAIKEARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+A+VDTN +P+LVD+VIP NDD+ RSI L VA I+ A Sbjct: 181 IPIIAMVDTNCDPELVDFVIPANDDAIRSIQLMVKAVADTVINARA 226 >gi|261879110|ref|ZP_06005537.1| 30S ribosomal protein S2 [Prevotella bergensis DSM 17361] gi|270334292|gb|EFA45078.1| 30S ribosomal protein S2 [Prevotella bergensis DSM 17361] Length = 288 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 162/282 (57%), Gaps = 9/282 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + + Sbjct: 1 MSRTTFDQLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEAMKNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFV+TK Q D + + V +W GG +TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVSTKKQTKDIIADKVSAINMPYVTERWAGGTLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MADGTFSNLSKREILQINRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVREAHRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT---- 237 IP+ A+VDTNS+P+ +DYVIP NDD+ S+ + + V +A +G+ + + + Sbjct: 181 IPVFAIVDTNSDPNGIDYVIPANDDAKDSVEIILETVCAAIAEGLEERKAEKADEKAAAE 240 Query: 238 --KSAGETVVHSKEGMQLEEDSQSSESSVLD--GQEVAVVPE 275 A E ++ + +E++++ E+ V + G+E E Sbjct: 241 QPDEAAEVKRRTRRVRKDKEENEAKEAPVAEKAGEEAPAAKE 282 >gi|195928741|gb|ACG56050.1| ribosomal protein subunit 2 [Agalinis laxa] Length = 216 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 2/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGIKKWNPKMAPYISAKRKGNHITNLTRTARFLSEACNLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKA-HLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 119 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP Sbjct: 120 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIP 179 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D+ IP NDD SI L + + Sbjct: 180 TICLIDTNCDPDLADFSIPANDDGISSIRLILNKLV 215 >gi|195928749|gb|ACG56054.1| ribosomal protein subunit 2 [Agalinis maritima] Length = 217 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ +++E+GV FGHR WNPKM YIF +R HI +L++T L + ++ D + Sbjct: 1 NITLEEMMEAGVHFGHRTKRWNPKMAPYIFAKRKGRHITNLARTARFLSETCDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +A+D V AAK++ +CVN KWLGGM+TNW +QK RD E Sbjct: 61 SGKQFLIVGTTKKAADLVARAAKKARCHCVNKKWLGGMLTNWSITETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R +LKR L G++ M GLPD++ +VD E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRHLSRLKRYLGGVKYMTGLPDIVIIVDQREEYRALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDDS SI + + Sbjct: 181 TICLIDTNCDPDLADISIPANDDSRSSIRFILNKLV 216 >gi|162072729|gb|ABX82362.1| 30S ribosomal protein S2 [Chlamydia trachomatis] Length = 284 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 102/279 (36%), Positives = 160/279 (57%), Gaps = 1/279 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T ++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTSKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R + + + Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKRLGVEILSPVRP 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 A + E + L ++S G V + ++ + Sbjct: 241 AERPAEEAVEELPLPTGEAQDKASSKGGGRVLLWADIDN 279 >gi|91201169|emb|CAJ74229.1| strongly similar to 30S ribosomal protein S2 [Candidatus Kuenenia stuttgartiensis] Length = 234 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 91/227 (40%), Positives = 139/227 (61%), Gaps = 1/227 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I++L+E+G FGHR WNPKM+ +IF ++N HII+L +TV L A + +++ Sbjct: 1 MSIVNIQELVEAGFHFGHRTSRWNPKMKPFIFGKQNLIHIINLRETVKGLITACRFVTNL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V ILFV TK QA D AKR + V+ +WLGG +TN+ T+ +++L +LE++ Sbjct: 61 VQTKKDILFVGTKWQAQDITAREAKRCGMHYVSERWLGGALTNFDTIRSRLERLEELEKM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + E ++KK ++ R+ K+ L+GIR+M LP + VVD E AI+EA++L Sbjct: 121 KDTGEINQYSKKMISSLNREYKKILTNLEGIRNMTKLPGALVVVDPRYEHNAIKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IP V + DT+ +PD+VD +PGNDD+ RSI LF A A + G + Sbjct: 181 IPTVCLADTDCDPDMVDICVPGNDDAIRSINLFLSKTADAVLAGKEQ 227 >gi|124005877|ref|ZP_01690715.1| ribosomal protein S2 [Microscilla marina ATCC 23134] gi|123988560|gb|EAY28201.1| ribosomal protein S2 [Microscilla marina ATCC 23134] Length = 272 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 102/276 (36%), Positives = 165/276 (59%), Gaps = 8/276 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + LL++GV FGH W+P++ Y+F E+N HIIDL++T+ L A ++ Sbjct: 1 MSRVEYKDLLDAGVHFGHLTRKWDPRIAPYVFMEKNGIHIIDLNKTLVCLDDACNALAKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +++FVATK QA + V E AKR V +WLGGM+TN+ TV +S++K+ ++++ Sbjct: 61 VRAGRKVMFVATKRQAQEIVAEEAKRLRMPYVTERWLGGMLTNFATVRKSLKKMSSMDKM 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +E + K+ERL I R+R+KL+R L GI D+ LP +FVVD RE +AI EA +L Sbjct: 121 MKEEAFKNMAKRERLMITREREKLERLLGGIADLTRLPAALFVVDVKREHIAIAEAHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNSNP V + +P NDD+ +SI + V A +G++ + K Sbjct: 181 IPVFAMVDTNSNPGAVQFPVPANDDAFKSIQVITSTVGKAIEEGLSERK-------KDKE 233 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + +E + + D+++ E+ D ++ V + Sbjct: 234 EQKLAKEEQAKRQVDAKAEEAKAEDTEKTDKVEKTE 269 >gi|56707466|ref|YP_169362.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669937|ref|YP_666494.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis FSC198] gi|224456548|ref|ZP_03665021.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370840|ref|ZP_04986845.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874305|ref|ZP_05247015.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis MA00-2987] gi|61215377|sp|Q5NHY0|RS2_FRATT RecName: Full=30S ribosomal protein S2 gi|123169597|sp|Q14JD2|RS2_FRAT1 RecName: Full=30S ribosomal protein S2 gi|56603958|emb|CAG44946.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320270|emb|CAL08329.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis FSC198] gi|151569083|gb|EDN34737.1| hypothetical protein FTBG_00655 [Francisella tularensis subsp. tularensis FSC033] gi|254840304|gb|EET18740.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis MA00-2987] gi|282158610|gb|ADA78001.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis NE061598] Length = 239 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 157/234 (67%), Gaps = 1/234 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++L GV FGH+ WNP+M+ YIF + HII+L +TVP+ Q A+ + TVA GG Sbjct: 4 MKEMLSVGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK QA D V AKR V+ +WLGGM+TN+KTV QSI++L LE++ + Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMSFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + TKKE L R +KL++ L GI++MGGLPD + V+D+N+E +AIQEA++L I +VA Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 +VDTNSNP+ +DY+IPGNDD+ +SI+ + A A ID + ++A Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQGLDRAVEAKADEAA 237 >gi|118430295|ref|YP_874729.1| ribosomal protein S2 [Agrostis stolonifera] gi|209573633|sp|A1EA01|RR2_AGRST RecName: Full=30S ribosomal protein S2, chloroplastic gi|118201204|gb|ABK79573.1| ribosomal protein S2 [Agrostis stolonifera] Length = 236 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 131/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + Q K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFQHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|195928699|gb|ACG56029.1| ribosomal protein subunit 2 [Agalinis maritima] Length = 216 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ +++E+GV FGHR WNPKM YIF +R HI +L++T L + ++ D + Sbjct: 1 NITLEEMMEAGVHFGHRTKRWNPKMAPYIFAKRKGRHITNLARTARFLSETCDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +A+D V AAK++ +CVN KWLGGM+TNW +QK RD E Sbjct: 61 SGKQFLIVGTTKKAADLVARAAKKARCHCVNKKWLGGMLTNWSITETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R +LKR L G++ M GLPD++ +VD E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRHLSRLKRYLGGVKYMTGLPDIVIIVDQREEYRALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDDS SI + + Sbjct: 181 TICLIDTNCDPDLADISIPANDDSRSSIRFILNKLV 216 >gi|187918001|ref|YP_001883564.1| 30S ribosomal protein S2 [Borrelia hermsii DAH] gi|238689277|sp|B2RZI8|RS2_BORHD RecName: Full=30S ribosomal protein S2 gi|119860849|gb|AAX16644.1| SSU ribosomal protein S2P [Borrelia hermsii DAH] Length = 254 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 103/253 (40%), Positives = 165/253 (65%), Gaps = 6/253 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAVITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKSGKKVLFVGTKKQASEIIEQEAKRSDMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + +KKE + R++ KL + L GI+DM LP +F++D RE++ I EAR+L Sbjct: 121 EIDGTFEMISKKEVSQLNREKLKLSKNLTGIKDMEELPGAVFIIDPKREQIVINEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID-----GIARQHSYMGAD 236 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ GI + D Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIVENLNEED 240 Query: 237 TKSAGETVVHSKE 249 S E KE Sbjct: 241 LMSEIEVKNEKKE 253 >gi|78186291|ref|YP_374334.1| 30S ribosomal protein S2 [Chlorobium luteolum DSM 273] gi|123757262|sp|Q3B5U0|RS2_PELLD RecName: Full=30S ribosomal protein S2 gi|78166193|gb|ABB23291.1| SSU ribosomal protein S2P [Chlorobium luteolum DSM 273] Length = 253 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 102/253 (40%), Positives = 141/253 (55%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + ++L +GV FGH W PKM+ YIF E+N HIIDL +T+ + AL + Sbjct: 1 MSHFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTLVLADDALNALDAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + A R+ V +WLGGM+TN+ T+ QSI+++ +E + Sbjct: 61 AQTGREIMFVGTKKQAKQIIAAEATRAGMPFVCERWLGGMLTNFSTIRQSIRRMNSIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKERL + R+R+KL R L GI M LP +F+VD +E +AI+EAR L Sbjct: 121 ETDGTFDMITKKERLMLAREREKLMRILGGIATMTRLPAALFIVDIKKEHIAIKEARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTN +P+ VDYVIP NDD+ RSI L VA ++ A + A Sbjct: 181 IPIFAMVDTNCDPEQVDYVIPANDDAIRSIQLMVKAVADTVVNARAMKVEQEVLAEMDAP 240 Query: 242 ETVVHSKEGMQLE 254 E E Sbjct: 241 EVDAAEDAAQSAE 253 >gi|332826873|gb|EGJ99673.1| 30S ribosomal protein S2 [Dysgonomonas gadei ATCC BAA-286] Length = 284 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 152/277 (54%), Gaps = 4/277 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++GV FGH WNP M YIF ERN HIIDL +T+ + A + Sbjct: 1 MAKLEFDQLLDAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTIAKTEDAAAAMKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA V + A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKQVVTDLALSINMPYVVERWPGGMLTNFPTIRKAVKKMSTIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+ERL + R+R KL++ L I+D+ LP +FVVD +E +A++EA RL Sbjct: 121 VKDGTFDTLSKRERLQVTRQRAKLEKTLGSIQDLTRLPSALFVVDVMKEHIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ---HSYMGADTK 238 IP+ A+VDTNSNPD +D+VIP NDD+++SI L + A +G+ + + A Sbjct: 181 IPVFAMVDTNSNPDDIDFVIPANDDAAKSIELILGSLCDAIKEGLEERKIEKADSAAAEA 240 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E + ++ E + AV + Sbjct: 241 QDEEGAPRRERKAKVGAKKPVVEKEDQEAINAAVASK 277 >gi|320335236|ref|YP_004171947.1| 30S ribosomal protein S2 [Deinococcus maricopensis DSM 21211] gi|319756525|gb|ADV68282.1| ribosomal protein S2 [Deinococcus maricopensis DSM 21211] Length = 256 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 98/259 (37%), Positives = 152/259 (58%), Gaps = 8/259 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++QLLE+GV FGH WNPK +R+IF ERN IIDL +T+ + ++ I D R Sbjct: 3 IGMKQLLEAGVHFGHETKRWNPKFKRFIFAERNGIFIIDLQKTLKQIDRSFDYIKDLSER 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV TK QA + V A+RS V S+WLGGM+TN++T+ I +L +L+++ Sbjct: 63 GGTILFVGTKKQAQEIVELEARRSGMPYVTSRWLGGMLTNFRTMRTRIDRLNELDDMFES 122 Query: 126 E-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K ER+ + +R++L R + GIR M +PD +FVVD +E +A+QEA +L IP+ Sbjct: 123 GRINDRPKAERIQLGNERERLLRYVGGIRKMTRMPDAIFVVDPTKEVIAVQEANKLGIPV 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+ DT+S+PD++DY++PGNDD+ RSI L + ++ G + E Sbjct: 183 IALADTDSDPDVIDYIVPGNDDAIRSIQLITHRIGDLIVEAR-------GGAEDVSSELS 235 Query: 245 VHSKEGMQLEEDSQSSESS 263 ++ ++E++ Sbjct: 236 TEETADADGSTEADAAETA 254 >gi|327541525|gb|EGF28059.1| 30S ribosomal protein S2 [Rhodopirellula baltica WH47] Length = 396 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 144/229 (62%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++++E+GV FGHR LWNPKM YIF ++N HI+D+ +T+ L +A + +S Sbjct: 137 MANEIVKEMIEAGVHFGHRTSLWNPKMAPYIFGKKNQIHILDIRETLRGLLRAKKYLSQV 196 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + V E + R V+ +WLGG +TN++T+ + +L +LE L Sbjct: 197 AAGGSLILFVGTKRQAGEAVEEQSLRCGMPFVSERWLGGTLTNFRTIRSRLGRLEELEAL 256 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + ++KK + ++ R+ K+ R L+G+R M LP++MF+VD +E+ A++EA+RL Sbjct: 257 RAGDGINDYSKKMQSSLNREYRKMYRNLNGLRTMNRLPEVMFIVDPGKERNAVREAKRLG 316 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 I VA++DT+S+P +D IPGNDD RS+ + +A A I G + Sbjct: 317 ITTVALIDTDSDPSQIDLPIPGNDDGIRSVEMIMRELADAVIAGKGQTQ 365 >gi|32447081|emb|CAD76890.1| ribosomal protein S2 [Rhodopirellula baltica SH 1] Length = 396 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 144/229 (62%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++++E+GV FGHR LWNPKM YIF ++N HI+D+ +T+ L +A + +S Sbjct: 137 MANEIVKEMIEAGVHFGHRTSLWNPKMAPYIFGKKNQIHILDIRETLRGLLRAKKYLSQV 196 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + V E + R V+ +WLGG +TN++T+ + +L +LE L Sbjct: 197 AAGGSLILFVGTKRQAGEAVEEQSLRCGMPFVSERWLGGTLTNFRTIRSRLGRLEELEAL 256 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + ++KK + ++ R+ K+ R L+G+R M LP++MF+VD +E+ A++EA+RL Sbjct: 257 RAGDGINDYSKKMQSSLNREYRKMYRNLNGLRTMNRLPEVMFIVDPGKERNAVREAKRLG 316 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 I VA++DT+S+P +D IPGNDD RS+ + +A A I G + Sbjct: 317 ITTVALIDTDSDPSQIDLPIPGNDDGIRSVEMIMRELADAVIAGKGQTQ 365 >gi|195928795|gb|ACG56077.1| ribosomal protein subunit 2 [Agalinis skinneriana] gi|195928797|gb|ACG56078.1| ribosomal protein subunit 2 [Agalinis skinneriana] Length = 218 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 122/218 (55%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++L++GV FGH WNPKM YI +R HI +L++T L + ++ + Sbjct: 1 NINLEEMLKAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 RGKQFLIVGTKREAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD SI + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNKLVFA 218 >gi|203284048|ref|YP_002221788.1| 30S ribosomal protein S2 [Borrelia duttonii Ly] gi|238690560|sp|B5RLJ7|RS2_BORDL RecName: Full=30S ribosomal protein S2 gi|201083491|gb|ACH93082.1| 30S ribosomal protein S2 [Borrelia duttonii Ly] Length = 254 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 105/254 (41%), Positives = 165/254 (64%), Gaps = 6/254 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAVITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKNGKKVLFVGTKKQASEIIEQEAKRSEMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + +KKE I R++ KL + L GI+DM LP +F++D RE++ I EAR+L Sbjct: 121 EVDGTFEMISKKEVSQINREKLKLAKNLTGIKDMEELPGAIFIIDPKREQIVINEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID-----GIARQHSYMGAD 236 IPI+AVVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ GI + D Sbjct: 181 IPIIAVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIVENLNEED 240 Query: 237 TKSAGETVVHSKEG 250 S E KE Sbjct: 241 LMSEIEVKNERKES 254 >gi|291296162|ref|YP_003507560.1| 30S ribosomal protein S2 [Meiothermus ruber DSM 1279] gi|290471121|gb|ADD28540.1| ribosomal protein S2 [Meiothermus ruber DSM 1279] Length = 243 Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 94/242 (38%), Positives = 154/242 (63%), Gaps = 3/242 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +I++LLE+GV FGH WNPKM+RYI+ ERN IIDL +++ L++ + + D Sbjct: 1 MANVSIKELLEAGVHFGHETKRWNPKMKRYIYAERNGIFIIDLQKSMVELERTFKYVQDL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RG IL+V TK QA + + + A R+ VN +WLGGM+TN++T++ + +L +LE L Sbjct: 61 AMRGATILYVGTKKQAQEIIQQEADRAGMPYVNQRWLGGMLTNFRTITAQVNRLAELEAL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + E + K E++ ++ + ++L++ L G R + LPD +FVVD +E +A++EAR+L Sbjct: 121 FASDEIKERVKTEQVKLQHELERLQKNLGGFRKLRRLPDAIFVVDPTKEAIAVKEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTKS 239 IP++A+ DT+S+PD+ DY+IPGNDD+ RSI L + ++ G R+ + + Sbjct: 181 IPVIALADTDSDPDVCDYIIPGNDDAIRSIQLIVSRMTDLIVEARGGGREVPAQAVEAEV 240 Query: 240 AG 241 A Sbjct: 241 AE 242 >gi|162319770|ref|YP_379943.2| 30S ribosomal protein S2 [Chlorobium chlorochromatii CaD3] gi|209573713|sp|Q3AQ25|RS2_CHLCH RecName: Full=30S ribosomal protein S2 Length = 251 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 107/253 (42%), Positives = 147/253 (58%), Gaps = 3/253 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + +L +GV FGH W PKM+ YIF E+N HIIDL +T + AL+ + Sbjct: 1 MSHFQVEDMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTAELANTALKALEAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + E A RS V+ +WLGGM+TN++T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKVIIAEQATRSNMPYVSERWLGGMLTNFQTIRQSIRRMNSIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKERL + R+R+KL R L GI M LP +FVVD +E LAI+EAR L Sbjct: 121 ATDGTYDMITKKERLMLGREREKLMRILGGIATMNRLPAALFVVDIKKEHLAIKEARTLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTN +P+LVDYVIP NDD+ RSI L VA I+ AR+ + Sbjct: 181 IPVFAMVDTNCDPELVDYVIPANDDAIRSIQLMVKAVADTIIN--ARELKVEQEVLATMD 238 Query: 242 ETVVHSKEGMQLE 254 E V + E Sbjct: 239 EAEVEGDKEDISE 251 >gi|297566377|ref|YP_003685349.1| 30S ribosomal protein S2 [Meiothermus silvanus DSM 9946] gi|296850826|gb|ADH63841.1| ribosomal protein S2 [Meiothermus silvanus DSM 9946] Length = 251 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 105/265 (39%), Positives = 165/265 (62%), Gaps = 15/265 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA I++LLE+GV FGH WNPKM+RYI+ ERN IIDL +T+ +++ + + Sbjct: 1 MAF-NINIKELLEAGVHFGHETKRWNPKMKRYIYAERNGIFIIDLQKTMVEIERTFKYVQ 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D RGG IL+V TK QA + V + A R+ VN +WLGGM+TN++T++ + +L++LE Sbjct: 60 DLAMRGGTILYVGTKKQAQEIVQQEADRAGMPYVNQRWLGGMLTNFRTITAQVNRLQELE 119 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 L ++E K E++ ++ + D+L++ L G R + LPD +FV+D +E +A++EAR+ Sbjct: 120 NLFASEEINERVKTEQVRLKHEMDRLQKNLGGFRKLKRLPDALFVIDPTKEAIAVKEARK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+VA+ DT+S+PDL DY+IPGNDD+ RSI L + ++ T+ Sbjct: 180 LGIPVVALADTDSDPDLCDYIIPGNDDAIRSIQLIVTRLTDLIVE------------TRG 227 Query: 240 AGETVVHSKEGMQLEEDSQSSESSV 264 T + + +LEE SQ+ E++ Sbjct: 228 GAATPIRATAPTELEE-SQAEEANA 251 >gi|224178094|ref|YP_002600951.1| ribosomal protein S2 [Pyramimonas parkeae] gi|215882761|gb|ACJ71134.1| ribosomal protein S2 [Pyramimonas parkeae] Length = 225 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 90/223 (40%), Positives = 136/223 (60%), Gaps = 1/223 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ Q+L++GV FGH+ WNPKME +I+ ERN HIID+ QT+ ++K + ++ + Sbjct: 2 ITLEQMLDAGVHFGHQVRRWNPKMEPFIYGERNGIHIIDIVQTLSCIEKISEFLTQEKKK 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA+ + AA S + VN +WLGGM+TNW T+ I+KLR +E+L Sbjct: 62 GKTILFVGTKRQAAPVIQTAAINSNSHYVNQRWLGGMLTNWATMKTCIEKLRKIEKLEET 121 Query: 126 E-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE ++++R+KL++ G++ M LPD++ +V RE A++E +L I Sbjct: 122 GVLNSLPKKELALLKKRREKLEKYFGGVKTMPNLPDIVILVGQPRETNAVKECNKLGIRT 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D+ IP NDDS RS+ L + A G Sbjct: 182 ITILDTNCDPDLADFFIPANDDSIRSVELVLGELTEAIKKGQK 224 >gi|149370957|ref|ZP_01890552.1| 30S ribosomal protein S2 [unidentified eubacterium SCB49] gi|149355743|gb|EDM44301.1| 30S ribosomal protein S2 [unidentified eubacterium SCB49] Length = 267 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 103/267 (38%), Positives = 154/267 (57%), Gaps = 14/267 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++LL++GV FGH WNP M YI+ ERN HII+L +TV L +A + + Sbjct: 1 MAKLEVKELLDAGVHFGHLTRKWNPNMAPYIYMERNGIHIINLYKTVAKLDEANEALKKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V E A + + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGRKILFVATKKQAKDIVAEKAGNANMPYITERWPGGMLTNFVTIRKAVKKMTTIDRM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKERL ++R R KL++ L I DM LP +FVVDT RE +A+ EA L+ Sbjct: 121 KADGTFLTLSKKERLQVDRLRAKLEKNLGSISDMSRLPGALFVVDTTREHIAVAEALILK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ------------ 229 IPI A+VDTNS+P ++DY IP NDD+S+SI V A I+G+ + Sbjct: 181 IPIFAMVDTNSDPRVIDYAIPSNDDASKSIDKIMTSVTDAVIEGLEERKNAKAADDKKAA 240 Query: 230 -HSYMGADTKSAGETVVHSKEGMQLEE 255 T++ E V + E + EE Sbjct: 241 APKAKAVKTEAKKEAPVVAAEATKEEE 267 >gi|215400711|ref|YP_002327472.1| ribosomal protein S2 [Vaucheria litorea] gi|194441161|gb|ACF70889.1| ribosomal protein S2 [Vaucheria litorea] Length = 236 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + +LL +GV FGH+ WNPKM YI+ E++ HIIDL QT +L++A + Sbjct: 1 MVKVELSELLAAGVHFGHKAHHWNPKMSPYIYTEKDGVHIIDLIQTSVLLKQACNFVQTA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 G LFV TK QA+ + + A+R + VN +WLGGM+TNW T IQ+L+DLE + Sbjct: 61 SQTGKSFLFVGTKRQAAPVIAKEAQRCGAHYVNYRWLGGMLTNWITFRTRIQRLKDLENQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E KKE + ++ ++L++ G++ M PD++ ++D E +AI+EA L Sbjct: 121 QQQGEIDNLPKKEAAKLTKELERLRKYFTGVKTMTKEPDIIVIIDQKIEIIAIKEALALN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 PI++++DTN NPDLV IPGNDD+ +SI + +A + +G Sbjct: 181 KPIISILDTNCNPDLVTLPIPGNDDAVQSIKYIIEKLAESISNGQ 225 >gi|229915542|gb|ACQ90886.1| ribosomal protein S2 [Pedinomonas minor] Length = 257 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 94/249 (37%), Positives = 141/249 (56%), Gaps = 1/249 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q T+ Q++++G+ FGH++ WNPKM YI+ ERN H+IDL QT L++ ++D + Sbjct: 2 QLTLEQMVKAGMHFGHQSRKWNPKMAPYIYGERNGIHLIDLVQTFTKLKEVKAFLADQAS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G LFV TK+QA+ V +AA + + VN +WLGGM+TNWKT+ S+ L LE+L Sbjct: 62 QGKTFLFVGTKNQAARLVSKAAIEANSFFVNHRWLGGMLTNWKTIRTSLANLDRLEQLEE 121 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE N+++ +++L R L G++ M +PD++ ++ E A+ E RL I Sbjct: 122 SGGFEQLPKKEAANLKKVKERLTRYLGGLKGMSRIPDVVIIIGQPDEITAVYECNRLGIR 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 V V+DT+ +P L D V+P NDDS SI L S+ DG GA K A Sbjct: 182 TVTVLDTDCDPSLADMVVPANDDSVASIQLLLQEFVSSIQDGKREWQEKGGAQKKFAKRK 241 Query: 244 VVHSKEGMQ 252 V + Sbjct: 242 VFSKTARPK 250 >gi|116008995|gb|ABJ52166.1| ribosomal protein S2 [Phyllostachys edulis] Length = 231 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D + Sbjct: 6 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAAS 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+ V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 66 QGKSFLIVGTKKRAAYLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 125 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 126 MGKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 185 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 186 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 229 >gi|159106857|ref|YP_001531276.1| ribosomal protein S2 [Lolium perenne] gi|209573611|sp|A8Y9G3|RR2_LOLPR RecName: Full=30S ribosomal protein S2, chloroplastic gi|158934391|emb|CAO85969.1| ribosomal protein S2 [Lolium perenne] Length = 236 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 130/222 (58%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D + Sbjct: 7 NINLKEMVEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + Q K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFQHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|195928827|gb|ACG56093.1| truncated ribosomal protein subunit 2 [Brachystigma wrightii] Length = 209 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 122/207 (58%), Gaps = 1/207 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNHLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRS 210 + ++DTN +PDL D IP NDD+ S Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISS 207 >gi|325286743|ref|YP_004262533.1| 30S ribosomal protein S2 [Cellulophaga lytica DSM 7489] gi|324322197|gb|ADY29662.1| ribosomal protein S2 [Cellulophaga lytica DSM 7489] Length = 340 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 152/242 (62%), Gaps = 2/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NKIEVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V + A ++ + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVADKAGKANMPYITERWPGGMLTNFVTIRKAVKKMASID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I DM LP +F+VDT RE +A++EA + Sbjct: 120 RMKKDGTFLTLSKKERLQVDRLRAKLEKNLGSISDMTRLPGALFIVDTMREHIAVKEALK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P +DY+IP NDD+S+SI V+ A I+G+A + S A+ + Sbjct: 180 LNIPIFAMVDTNSDPRPIDYIIPSNDDASKSIEAVLSHVSEAIIEGLADRKSDKQAEKEG 239 Query: 240 AG 241 Sbjct: 240 KD 241 >gi|88194965|ref|YP_499765.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87202523|gb|ABD30333.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 243 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 151/238 (63%), Gaps = 6/238 (2%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNPKM++YIF ERN +IIDL +TV + +A + GG++LFV TK QA + V Sbjct: 11 WNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQESVKS 70 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRD 143 A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ + + KKE + ++++ D Sbjct: 71 EAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDGLFEVLPKKEVVELKKEYD 130 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 +L + L GIRDM +P +FVVD +E+ AI EAR+L IPIV +VDTN +PD +DYVIP Sbjct: 131 RLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPA 190 Query: 204 NDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSE 261 NDD+ R++ L +A A ++G ++ + A E + E + EE + E Sbjct: 191 NDDAIRAVKLLTAKMADAILEGQQGV-----SNEEVAAEQNIDLDEKEKSEETEATEE 243 >gi|290487154|gb|ADD29961.1| ribosomal protein S2 [Rhododendron simsii] Length = 236 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+ V FGHR WNPKM YI+ +R HI +L+ T L +A ++ D Sbjct: 7 NINLEEMMEARVHFGHRIKKWNPKMAPYIWAKRKGMHITNLALTTRFLSEACDLVFDAAR 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R RIL V TK + +D V AA ++ + VN KWLGGM+TNW T + + K + L L Sbjct: 67 RRKRILIVGTKKRVADSVARAAIKARCHYVNKKWLGGMLTNWSTTERRLCKFKKLRLELK 126 Query: 125 KENQGFTKK-ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KK + ++RK L+ L GI+ M +PD++ ++D ++E A++E L IP Sbjct: 127 MVRRNLLKKRDAARLKRKLSHLQTYLGGIKYMTAIPDIVIIIDQHKEYTALRECIILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDLVD+ IP NDD+ SI + A +G + Sbjct: 187 TICLIDTNCDPDLVDFPIPANDDTRASIRFILTKLVFAICEGRS 230 >gi|110596888|ref|ZP_01385178.1| ribosomal protein S2 [Chlorobium ferrooxidans DSM 13031] gi|110341575|gb|EAT60035.1| ribosomal protein S2 [Chlorobium ferrooxidans DSM 13031] Length = 251 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 97/226 (42%), Positives = 139/226 (61%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + F + ++L +GV FGH W PKM+ YIF E+N HIIDL +TV + +AL+ I Sbjct: 1 MSHFQLEEMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTVVLADEALKAIEAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G I+FV TK QA + A+R+ V +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 61 AQTGREIMFVGTKKQAKQIIAAEAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNSIDRM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKERL + R+++KL R L GI M LP +F+VD +E +AI+EAR L Sbjct: 121 ETDGTFDMITKKERLMLGREKEKLMRILGGIATMTRLPAALFIVDIKKEHIAIKEARSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+A+VDTN +P+ VD+VIP NDD+ RSI L VA + Sbjct: 181 IPIIAMVDTNCDPEQVDFVIPANDDAIRSIQLMVKAVADTILKARE 226 >gi|194334609|ref|YP_002016469.1| 30S ribosomal protein S2 [Prosthecochloris aestuarii DSM 271] gi|194312427|gb|ACF46822.1| ribosomal protein S2 [Prosthecochloris aestuarii DSM 271] Length = 253 Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats. Identities = 98/228 (42%), Positives = 145/228 (63%), Gaps = 1/228 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + +F++ +L +GV FGH W PKM+ +IF E+N HIIDL +T+ M + A++ I Sbjct: 5 TMSRFSLEDMLRAGVHFGHLARRWCPKMKPFIFMEKNGVHIIDLKKTLYMAEDAMKAIDA 64 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 G I+FV TK QA + + A+R+ V+ +WLGGM+TN+ T+ QSI+++ ++ Sbjct: 65 IALTGKEIMFVGTKKQAKNIISAEAERAGMPFVSERWLGGMLTNFSTIRQSIRRMNAIDR 124 Query: 122 LL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + TKKERL + R++DKL R L GI +M LP +F+VD +E +AI+EAR L Sbjct: 125 METDGTFDMITKKERLMLMREKDKLFRILGGISNMTRLPAALFIVDIKKEHIAIKEARSL 184 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 IPI A+VDTN +PD VDYVIP NDD+ RSI L VA + ++ + Sbjct: 185 GIPIFALVDTNCDPDEVDYVIPANDDAIRSIELMVKAVADSILNARQQ 232 >gi|198277522|ref|ZP_03210053.1| hypothetical protein BACPLE_03744 [Bacteroides plebeius DSM 17135] gi|198270020|gb|EDY94290.1| hypothetical protein BACPLE_03744 [Bacteroides plebeius DSM 17135] Length = 279 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 98/271 (36%), Positives = 156/271 (57%), Gaps = 2/271 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV +++A + + Sbjct: 1 MSRVNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKVEEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKILFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSDPSNIDFVIPANDDATKSVEVILDACCAAMAEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 E + + + +E ++ + A Sbjct: 240 ENAPKAAKKKATKARMDKAEEDAINASKAAA 270 >gi|552977|gb|AAA84732.1| ribosomal protein S2 [Triticum aestivum] Length = 236 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGTSFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + + +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFSICEGRS 230 >gi|149174648|ref|ZP_01853273.1| 30S ribosomal protein S2 [Planctomyces maris DSM 8797] gi|148846342|gb|EDL60680.1| 30S ribosomal protein S2 [Planctomyces maris DSM 8797] Length = 252 Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats. Identities = 93/252 (36%), Positives = 141/252 (55%), Gaps = 1/252 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +LE+GV +GH+ WNPKM YI+ RN HIIDL +TV + + + + Sbjct: 1 MSDLVVKDILEAGVHYGHKTSRWNPKMRPYIYGRRNQIHIIDLKETVRGIIRGKRYLERV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++G ILFV TK QA + +AA V +WLGG +TN++TV +++L +LE Sbjct: 61 ASQGSLILFVGTKKQAQGPIRDAATACGMPYVTERWLGGALTNFRTVRNRLKRLEELESF 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E ++KK + + R++ K+ R L+GIR M LP+ + VVD +EK A+ EA L Sbjct: 121 DETGEIHSYSKKMQSTLLREKRKVFRNLNGIRTMNRLPEALVVVDPTKEKNAVHEAHILG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 I +V ++DT+S+PD VD IPGNDDS RSI L + +AS+ ++G + D Sbjct: 181 IKVVGLIDTDSDPDEVDLPIPGNDDSIRSIRLVMNQLASSIMEGKGKLPDTGKKDDSGDA 240 Query: 242 ETVVHSKEGMQL 253 K L Sbjct: 241 GAEEEFKPVPSL 252 >gi|218176238|ref|YP_002364495.1| ribosomal protein S2 [Festuca arundinacea] gi|215882322|gb|ACJ70752.1| ribosomal protein S2 [Festuca arundinacea] Length = 236 Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 130/222 (58%), Gaps = 1/222 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ DT + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDTAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + Q K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFQHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +++VDTN +PDL + IP NDD+ SI L + + A +G Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEG 228 >gi|307247539|ref|ZP_07529584.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856042|gb|EFM88200.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 208 Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats. Identities = 100/208 (48%), Positives = 144/208 (69%), Gaps = 1/208 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R +L +GV +GH+ WNPKM+ +IF RN H+I+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G+ILFV TK AS+ V AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 SSNNGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + TKKE L R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L Sbjct: 121 TQDGTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSR 209 IP+ A+VDTNS PD V+Y+IPGNDD++R Sbjct: 181 IPVFAIVDTNSTPDGVNYIIPGNDDATR 208 >gi|225011205|ref|ZP_03701665.1| ribosomal protein S2 [Flavobacteria bacterium MS024-3C] gi|225004666|gb|EEG42628.1| ribosomal protein S2 [Flavobacteria bacterium MS024-3C] Length = 327 Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats. Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 2/244 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NKIEVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVAEKAANVNMPYITERWPGGMLTNFITIRKAVKKMATID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I DM LP +FVVDT RE +A++EA + Sbjct: 120 RMKKDGTFLTLSKKERLQVDRLRAKLEKNLGSISDMTRLPGALFVVDTMREHIAVKEALK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P +DYVIP NDD+S+SI V A +G++ + S A+ + Sbjct: 180 LNIPIFAMVDTNSDPKQIDYVIPSNDDASKSIEAILAHVTGAVAEGLSERKSEKLAEKEG 239 Query: 240 AGET 243 A + Sbjct: 240 ASDA 243 >gi|304383662|ref|ZP_07366121.1| 30S ribosomal protein S2 [Prevotella marshii DSM 16973] gi|304335186|gb|EFM01457.1| 30S ribosomal protein S2 [Prevotella marshii DSM 16973] Length = 276 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 95/276 (34%), Positives = 154/276 (55%), Gaps = 1/276 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T QLL++G FGH + WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTTFDQLLQAGCHFGHLHRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFV+TK QA D V E A V +W GGM+TN+ T+ ++++K+ ++ Sbjct: 61 AKSGKKILFVSTKKQAKDVVAEKAAAVNMPYVTERWPGGMLTNFPTIRKAVKKMSTIDRL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MNDGTFSNLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEAIAVKEANRLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNSNP+ +D+VIP NDD+ SI + SA +G+ + + + +A Sbjct: 181 IPVFGIVDTNSNPNDIDFVIPANDDAKDSIEVILSACCSAIAEGLEERKAERADEKAAAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + ++ + ++ +E++ + P Sbjct: 241 QAEEAAEGKKRGTRRARKAEATPVAEAPQTEAPAAE 276 >gi|156598638|gb|ABU85575.1| ribosomal protein S2 [Scaevola aemula] Length = 238 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 129/223 (57%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++++GV GHR WNP+M YI +RN HII+L +T L +A ++ + Sbjct: 7 NINLEEMMKAGVHLGHRTKKWNPRMAPYIAAKRNGKHIINLIRTARFLSEACDLVFYAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + L V T+ + +D V AA ++ + VN KWL GM+TNW T+ + +QK R L Sbjct: 67 KGNQFLIVGTQKKEADSVARAAIKARCHYVNQKWLRGMLTNWSTIKERLQKFRALRAEQK 126 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K KK+ ++++ L++ +GI+ M LPD++ VVD +++ A++E L IP Sbjct: 127 KGFHRLPKKDAAMLKKQLAHLQKYFEGIQYMKRLPDIVIVVDQHKDYKALRECITLGIPT 186 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN +PDL D IP NDDS SI L + + A G + Sbjct: 187 ISLIDTNCDPDLADLPIPANDDSRSSIRLILNKLIFAICKGRS 229 >gi|300775868|ref|ZP_07085728.1| 30S ribosomal protein S2 [Chryseobacterium gleum ATCC 35910] gi|300505418|gb|EFK36556.1| 30S ribosomal protein S2 [Chryseobacterium gleum ATCC 35910] Length = 253 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 90/253 (35%), Positives = 150/253 (59%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LLE+GV FGH WNP M YIF E+N HI+DL +T L +A + Sbjct: 1 MAKANVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIVDLHKTAVKLDEACNALEKL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 TSAGKKVLFVATKKQAKEVVAKHASELNMPYITERWPGGMLTNFVTIRKAVKKMNAIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +KKERL ++R+R L++ L I DM LP +FVVD RE +A+ EA++L Sbjct: 121 KKDGTFETLSKKERLQVDRQRANLEKNLGSIADMVRLPSAVFVVDILREHIAVTEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P VD+VIPGNDD+S+SI + +V+ + +G +++ + + Sbjct: 181 IPVFGIVDTNSDPRKVDFVIPGNDDASKSIDMILSVVSESIKEGQSQRKADKEKSKEEGE 240 Query: 242 ETVVHSKEGMQLE 254 + + E Sbjct: 241 KVSADTDADFDAE 253 >gi|60117214|ref|YP_209548.1| ribosomal protein S2 [Huperzia lucidula] gi|75286701|sp|Q5SCY1|RR2_HUPLU RecName: Full=30S ribosomal protein S2, chloroplastic gi|50660022|gb|AAT80744.1| ribosomal protein S2 [Huperzia lucidula] Length = 235 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 89/224 (39%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV GH+ WNPKM YIF ER HII+L++T +A +++ + Sbjct: 7 NINLEEMMEAGVHSGHQARKWNPKMAPYIFAERKGIHIINLTRTARFSSEACDSVANVAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 G + V TK QA+D AA ++ + VN KWLGGM+TNW T+ + +QKLRDLE + Sbjct: 67 EGKQFSMVGTKYQAADLTASAAIKARCHYVNKKWLGGMLTNWSTMEKRLQKLRDLENKEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +KE + + KLK+ L GI M LPD++ +VD E +AI+E L IP Sbjct: 127 TGGFDRLPEKEAAISKGQLAKLKKYLGGIEYMASLPDVVTIVDQREESIAIKECITLNIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDL D IP NDD+ SI D +ASA +G Sbjct: 187 TICLVDTDCDPDLADIPIPANDDARASIRWISDKLASAICEGRK 230 >gi|218249399|ref|YP_002374651.1| ribosomal protein S2 [Borrelia burgdorferi ZS7] gi|226697634|sp|B7J156|RS2_BORBZ RecName: Full=30S ribosomal protein S2 gi|218164587|gb|ACK74648.1| ribosomal protein S2 [Borrelia burgdorferi ZS7] Length = 262 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 100/258 (38%), Positives = 167/258 (64%), Gaps = 4/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEED 256 E + + + +EE Sbjct: 241 LMKEIEIKNDKSDSIEEG 258 >gi|312131529|ref|YP_003998869.1| ssu ribosomal protein s2p [Leadbetterella byssophila DSM 17132] gi|311908075|gb|ADQ18516.1| SSU ribosomal protein S2P [Leadbetterella byssophila DSM 17132] Length = 284 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 113/269 (42%), Positives = 167/269 (62%), Gaps = 15/269 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LL++GV FGH W+P+M YIF E+N HIIDL+Q++ LQ A + Sbjct: 1 MAQVQYKDLLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNQSLEALQNAQAFLKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +++FVATK QA + V E AKR V +WLGGM+TN+ T+ +S++KL ++E + Sbjct: 61 VRSGRKVMFVATKKQAQEIVSEEAKRLKMPFVTERWLGGMLTNFSTIKKSLKKLSNIERM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 LN E + K+E+L + R++ KL+R L G+ D+ LP +FVVD RE LAI EA+RL Sbjct: 121 LNDEETAKNIAKREKLMLGREKAKLERLLGGVTDLSRLPAALFVVDIKREHLAIAEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+VA+ DTNSNP+LVDY IP NDD+ +SI+L + + +GI + D ++A Sbjct: 181 GIPVVAMCDTNSNPELVDYAIPANDDAYKSISLITLAIGKSIEEGILERK----TDKENA 236 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +Q EED++ + S +G+E Sbjct: 237 A---------LQEEEDAKRAVDSAKEGKE 256 >gi|325281311|ref|YP_004253853.1| ribosomal protein S2 [Odoribacter splanchnicus DSM 20712] gi|324313120|gb|ADY33673.1| ribosomal protein S2 [Odoribacter splanchnicus DSM 20712] Length = 265 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 4/246 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +LL +G FGH WNPKM YIF ERN+ HIIDL++T ML KA + Sbjct: 1 MSNTNFDELLNAGCHFGHLTRKWNPKMAPYIFMERNDIHIIDLNKTAIMLDKASAALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA D V E V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGRKILFVATKKQAKDIVAEKISNINMPYVTERWPGGMLTNFPTIRKAVKKMTTIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R KL + L I D+ LP +FVVD +E +A++EA+ L Sbjct: 121 EKDGTFDHLSKREKLQIARQRAKLDKNLGSIADLTRLPAALFVVDVMKEYIAVKEAKSLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM---GADTK 238 IP+ A+VDTNS+P +D+VIP NDD+S SI+L D VA A +G++ + + G + K Sbjct: 181 IPVFAMVDTNSDPSCIDFVIPCNDDASTSISLVIDRVADAIKEGLSERKAEKDKEGTEKK 240 Query: 239 SAGETV 244 A + V Sbjct: 241 PAAKKV 246 >gi|14017565|ref|NP_114252.1| ribosomal protein S2 [Triticum aestivum] gi|118430381|ref|YP_874646.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare] gi|17380274|sp|P17933|RR2_WHEAT RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573605|sp|A1E9I4|RR2_HORVU RecName: Full=30S ribosomal protein S2, chloroplastic gi|4958870|dbj|BAA78043.1| 30s r-protein CS2 [Triticum aestivum] gi|13928198|dbj|BAB47027.1| ribosomal protein S2 [Triticum aestivum] gi|118201035|gb|ABK79406.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare] Length = 236 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THII+L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHIINLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRATDLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + + +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFSICEGRS 230 >gi|2734701|gb|AAB93702.1| ribosomal protein subunit 2 [Veronica arvensis] Length = 204 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLDRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQYDEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|308196281|gb|ADO17488.1| ribosomal protein S2 [Arundinaria gigantea] Length = 236 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|2734639|gb|AAB93672.1| ribosomal protein subunit 2 [Antirrhinum majus] Length = 204 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|10179718|gb|AAG13851.1| ribosomal protein subunit 2 [Amphianthus pusillus] Length = 202 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E K+ Sbjct: 61 KNKAADSVAWAAIRARCHFVNKKWLGGMLTNWSTTETRLQKFRDLRLEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECMTLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|160177566|sp|A7M955|RR2_CUSRE RecName: Full=Plastid 30S ribosomal protein S2 Length = 236 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 124/223 (55%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M +I +R HII++++T L +A ++ D Sbjct: 7 NINLEEMMGAGVHFGHGTRKWNPQMAPFIAAKRKGIHIINITRTARFLSEACDLVFDAAR 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V T ++A+D V A++++ + VN KWL GM+TNW + K RD E Sbjct: 67 RGKKFLIVGTNNKAADSVARASRKARCHYVNKKWLAGMLTNWSITETRLNKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 127 KGGLNHLLKRDATMFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +P+L D IP NDD+ SI + + A +G Sbjct: 187 TICLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEGR 229 >gi|194033142|ref|YP_002000480.1| ribosomal protein S2 [Brachypodium distachyon] gi|193075550|gb|ACF08633.1| ribosomal protein S2 [Brachypodium distachyon] Length = 236 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFHHLPKRDVAILKRKLSTLQRYLGGIQYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|313677452|ref|YP_004055448.1| SSU ribosomal protein s2p [Marivirga tractuosa DSM 4126] gi|312944150|gb|ADR23340.1| SSU ribosomal protein S2P [Marivirga tractuosa DSM 4126] Length = 269 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 104/249 (41%), Positives = 154/249 (61%), Gaps = 1/249 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+GV FGH W+PKM YIF ERN HIIDL++T+ L +A I + Sbjct: 1 MAKLEYNDLLEAGVHFGHLTRKWDPKMAPYIFMERNGIHIIDLNKTLAALDEACHAIKNH 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFVATK QA D VME AKR V +W GGMMTN+ T+ +S++KL +++++ Sbjct: 61 VRSGKKVLFVATKKQAQDIVMEEAKRLNMPYVVDRWQGGMMTNFATIRKSLKKLANIDKM 120 Query: 123 LNKENQ-GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +E+ K+ERL I+R+++K++R L GI D+ LP +FV+D RE +AI+EA++L Sbjct: 121 QKEESYLNLAKRERLMIQREKEKMERVLGGIADLNRLPSALFVIDIKREHIAIKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P VDY IP NDD+ +SI+L A +G+ + + Sbjct: 181 IPVFAMVDTNSDPTQVDYPIPANDDAWKSISLILKSFGKAIEEGLMERKAEKDDAKMKQA 240 Query: 242 ETVVHSKEG 250 E + + Sbjct: 241 EEEKKAVDA 249 >gi|51598386|ref|YP_072574.1| 30S ribosomal protein S2 [Borrelia garinii PBi] gi|61215485|sp|Q662N9|RS2_BORGA RecName: Full=30S ribosomal protein S2 gi|51572957|gb|AAU06982.1| ribosomal protein S2 [Borrelia garinii PBi] Length = 262 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 100/258 (38%), Positives = 167/258 (64%), Gaps = 4/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKFKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEED 256 E + + + +EE Sbjct: 241 LMKEIEIKNDKSDSIEEG 258 >gi|6650116|gb|AAF21726.1|AF055138_1 ribosomal protein subunit 2 [Lamourouxia viscosa] Length = 202 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA R+ +CVN KWLGGM+TNW T +QK RD E K+ Sbjct: 61 KNKAADLVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|2734643|gb|AAB93674.1| ribosomal protein subunit 2 [Agalinis sp. CWD 90.129] Length = 204 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E K+ Sbjct: 61 KNKAADLVAWAAXKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|119952925|ref|YP_945134.1| 30S ribosomal protein S2 [Borrelia turicatae 91E135] gi|254764459|sp|A1QYS2|RS2_BORT9 RecName: Full=30S ribosomal protein S2 gi|119861696|gb|AAX17464.1| SSU ribosomal protein S2P [Borrelia turicatae 91E135] Length = 254 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 98/256 (38%), Positives = 168/256 (65%), Gaps = 4/256 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAVITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKSGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + +KKE + R++ KL + L GI+DM LP +F++D RE++ I EAR+L Sbjct: 121 EIDGTFEMISKKEVSQLNREKLKLSKNLTGIKDMEELPGAVFIIDPKREQIVINEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ + ++ Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQI---VENLN 237 Query: 242 ETVVHSKEGMQLEEDS 257 E + S+ ++ E+ Sbjct: 238 EEDLMSEIAVKDEKKE 253 >gi|255037249|ref|YP_003087870.1| 30S ribosomal protein S2 [Dyadobacter fermentans DSM 18053] gi|254950005|gb|ACT94705.1| ribosomal protein S2 [Dyadobacter fermentans DSM 18053] Length = 272 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 101/256 (39%), Positives = 156/256 (60%), Gaps = 8/256 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++LL++GV FGH W+P+M YIF E+N HIIDL++T+ L A + Sbjct: 1 MAQIEYKELLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNKTLSCLNDAEAALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +I+FVATK QA + V E AKR V +WLGGM+TN+ T+ +S++K++ LE++ Sbjct: 61 VRSGRKIMFVATKKQAQEIVTEEAKRLKMPYVTDRWLGGMLTNFGTIRKSLKKMQTLEKM 120 Query: 123 LNKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L E K+ERL + R+++KL+R L G+ D+ LP +F+VD RE +A+ EA+RL Sbjct: 121 LKDEATVSNIAKRERLMLTREKEKLERVLGGVADLTRLPAALFIVDVKREHIAVAEAKRL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI A+ DTNSNP+LVD+ IP NDD+ ++I+L + A +G+ + Sbjct: 181 NIPIFAICDTNSNPELVDFPIPSNDDAYKAISLITLAIGKAIEEGLMERKQDK------D 234 Query: 241 GETVVHSKEGMQLEED 256 + +V +E + + Sbjct: 235 DQRLVEEEEAKRAADK 250 >gi|203287588|ref|YP_002222603.1| 30S ribosomal protein S2 [Borrelia recurrentis A1] gi|238690583|sp|B5RQU8|RS2_BORRA RecName: Full=30S ribosomal protein S2 gi|201084808|gb|ACH94382.1| 30S ribosomal protein S2 [Borrelia recurrentis A1] Length = 254 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 104/254 (40%), Positives = 164/254 (64%), Gaps = 6/254 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAVITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKNGKKVLFVGTKKQASEIIEQEAKRSEMPYVNNRWLGGMLSNFNTIKKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ + +KKE I R++ KL + L GI+DM LP +F++D RE++ I EAR+L Sbjct: 121 EVDGTFEMISKKEVSQINREKLKLAKNLTGIKDMEELPGAIFIIDPKREQIVINEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID-----GIARQHSYMGAD 236 I I+AVVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ GI + D Sbjct: 181 ITIIAVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIVENLNEED 240 Query: 237 TKSAGETVVHSKEG 250 S E KE Sbjct: 241 LMSEIEVKNERKES 254 >gi|216264298|ref|ZP_03436290.1| ribosomal protein S2 [Borrelia burgdorferi 156a] gi|221217440|ref|ZP_03588911.1| ribosomal protein S2 [Borrelia burgdorferi 72a] gi|224534026|ref|ZP_03674610.1| ribosomal protein S2 [Borrelia burgdorferi CA-11.2a] gi|225549268|ref|ZP_03770241.1| ribosomal protein S2 [Borrelia burgdorferi 94a] gi|225549832|ref|ZP_03770794.1| ribosomal protein S2 [Borrelia burgdorferi 118a] gi|215980771|gb|EEC21578.1| ribosomal protein S2 [Borrelia burgdorferi 156a] gi|221192718|gb|EEE18934.1| ribosomal protein S2 [Borrelia burgdorferi 72a] gi|224512862|gb|EEF83229.1| ribosomal protein S2 [Borrelia burgdorferi CA-11.2a] gi|225369523|gb|EEG98974.1| ribosomal protein S2 [Borrelia burgdorferi 118a] gi|225370126|gb|EEG99566.1| ribosomal protein S2 [Borrelia burgdorferi 94a] Length = 260 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 100/260 (38%), Positives = 168/260 (64%), Gaps = 4/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIVTMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEEDSQ 258 E + + + +EE + Sbjct: 241 LMKEIEIKNDKSDSIEERGE 260 >gi|15594468|ref|NP_212257.1| 30S ribosomal protein S2 [Borrelia burgdorferi B31] gi|223889219|ref|ZP_03623808.1| ribosomal protein S2 [Borrelia burgdorferi 64b] gi|226320685|ref|ZP_03796243.1| ribosomal protein S2 [Borrelia burgdorferi 29805] gi|226321966|ref|ZP_03797491.1| ribosomal protein S2 [Borrelia burgdorferi Bol26] gi|3914881|sp|O51149|RS2_BORBU RecName: Full=30S ribosomal protein S2 gi|2688009|gb|AAC66511.1| ribosomal protein S2 (rpsB) [Borrelia burgdorferi B31] gi|223885468|gb|EEF56569.1| ribosomal protein S2 [Borrelia burgdorferi 64b] gi|226232556|gb|EEH31310.1| ribosomal protein S2 [Borrelia burgdorferi Bol26] gi|226233901|gb|EEH32624.1| ribosomal protein S2 [Borrelia burgdorferi 29805] gi|312147783|gb|ADQ30442.1| ribosomal protein S2 [Borrelia burgdorferi JD1] gi|312149370|gb|ADQ29441.1| ribosomal protein S2 [Borrelia burgdorferi N40] Length = 260 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 100/260 (38%), Positives = 168/260 (64%), Gaps = 4/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEEDSQ 258 E + + + +EE + Sbjct: 241 LMKEIEIKNDKSDSIEERGE 260 >gi|10179722|gb|AAG13853.1| ribosomal protein subunit 2 [Bacopa caroliniana] Length = 202 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA R+ + VN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIRARCHFVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|326336082|ref|ZP_08202254.1| 30S ribosomal protein S2 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691591|gb|EGD33558.1| 30S ribosomal protein S2 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 242 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 99/242 (40%), Positives = 150/242 (61%), Gaps = 2/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NSIEVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEACEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E A ++ + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGKKILFVATKKQAKDIVAEKATSASMPYITERWPGGMLTNFVTIRKAVKKMSSID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +KKE+L++ R R+KL++ L I DM LP +FVVDT RE +A++EA++ Sbjct: 120 KMKKDGTYDTLSKKEKLHVTRLREKLEKNLGSIADMTRLPSALFVVDTLREHIAVREAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VDYVIP NDD+SRSI V A +G+ ++ K+ Sbjct: 180 LNIPIFAMVDTNSDPREVDYVIPANDDASRSIEKILSYVVEAIKEGLEDNKKAEKSEEKT 239 Query: 240 AG 241 Sbjct: 240 TE 241 >gi|216264087|ref|ZP_03436081.1| ribosomal protein S2 [Borrelia afzelii ACA-1] gi|215980131|gb|EEC20953.1| ribosomal protein S2 [Borrelia afzelii ACA-1] Length = 260 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 99/260 (38%), Positives = 168/260 (64%), Gaps = 4/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKLKLAKNLSGIKDMETLPGAVFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEEDSQ 258 E + + + +EE + Sbjct: 241 LMKEIEIKNDKSDSIEEGGE 260 >gi|2734641|gb|AAB93673.1| ribosomal protein subunit 2 [Alectra orobanchoides] Length = 204 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ VVD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIVVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|253729550|ref|YP_003029733.1| ribosomal protein S2 [Bambusa oldhamii] gi|255961376|ref|YP_003097569.1| ribosomal protein S2 [Dendrocalamus latiflorus] gi|246367060|gb|ACS94671.1| ribosomal protein S2 [Bambusa oldhamii] gi|255040253|gb|ACT99913.1| ribosomal protein S2 [Dendrocalamus latiflorus] Length = 236 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+ V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRAAYLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|156618815|ref|YP_001430097.1| ribosomal protein S2 [Cuscuta reflexa] gi|156556000|emb|CAM98383.1| ribosomal protein S2 [Cuscuta reflexa] Length = 236 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M +I +R HI ++++T L +A ++ D Sbjct: 7 NINLEEMMGAGVHFGHGTRKWNPQMAPFIAAKRKGIHITNITRTARFLSEACDLVFDAAR 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V T ++A+D V A++++ + VN KWL GM+TNW + K RD E Sbjct: 67 RGKKFLIVGTNNKAADSVARASRKARCHYVNKKWLAGMLTNWSITETRLNKFRDLRMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 127 KGGLNHLLKRDATMFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + ++DTN +P+L D IP NDD+ SI + + A +G Sbjct: 187 TICLIDTNCDPNLSDISIPANDDAISSIRFILNKLVFAICEGR 229 >gi|2734651|gb|AAB93678.1| ribosomal protein subunit 2 [Boschniakia hookeri] Length = 204 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + KLRD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|15675849|ref|NP_270023.1| 30S ribosomal protein S2 [Streptococcus pyogenes M1 GAS] gi|19746964|ref|NP_608100.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS8232] gi|71911593|ref|YP_283143.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS5005] gi|94989421|ref|YP_597522.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS9429] gi|94991356|ref|YP_599456.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS10270] gi|94993310|ref|YP_601409.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS2096] gi|94995268|ref|YP_603366.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS10750] gi|306826498|ref|ZP_07459809.1| 30S ribosomal protein S2 [Streptococcus pyogenes ATCC 10782] gi|57014109|sp|P68901|RS2_STRP1 RecName: Full=30S ribosomal protein S2 gi|57014110|sp|P68902|RS2_STRP8 RecName: Full=30S ribosomal protein S2 gi|123080163|sp|Q1J9E6|RS2_STRPB RecName: Full=30S ribosomal protein S2 gi|123080282|sp|Q1JEJ7|RS2_STRPD RecName: Full=30S ribosomal protein S2 gi|123080354|sp|Q1JJJ5|RS2_STRPC RecName: Full=30S ribosomal protein S2 gi|123382121|sp|Q1J4B4|RS2_STRPF RecName: Full=30S ribosomal protein S2 gi|13623081|gb|AAK34744.1| 30S ribosomal protein S2 [Streptococcus pyogenes M1 GAS] gi|19749217|gb|AAL98599.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS8232] gi|71854375|gb|AAZ52398.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS5005] gi|94542929|gb|ABF32978.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS9429] gi|94544864|gb|ABF34912.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS10270] gi|94546818|gb|ABF36865.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS2096] gi|94548776|gb|ABF38822.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS10750] gi|304431357|gb|EFM34355.1| 30S ribosomal protein S2 [Streptococcus pyogenes ATCC 10782] Length = 255 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 164/253 (64%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEGRQGEDADVAFEADTQA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|325299010|ref|YP_004258927.1| ribosomal protein S2 [Bacteroides salanitronis DSM 18170] gi|324318563|gb|ADY36454.1| ribosomal protein S2 [Bacteroides salanitronis DSM 18170] Length = 279 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 98/271 (36%), Positives = 155/271 (57%), Gaps = 2/271 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRVNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQIVAEKATSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 TNDGTYANLSKREILQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P VD+VIP NDD+++S+ + D +A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSDPTNVDFVIPANDDATKSVEVILDACCAAMAEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 E + + + +E ++ + A Sbjct: 240 ENAPKAGKKKAAKARMDKAEQDAINASKAAA 270 >gi|209573727|sp|Q0SP41|RS2_BORAP RecName: Full=30S ribosomal protein S2 Length = 262 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 99/258 (38%), Positives = 167/258 (64%), Gaps = 4/258 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKLKLAKNLSGIKDMETLPGAVFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEED 256 E + + + +EE Sbjct: 241 LMKEIEIKNDKSDSIEEG 258 >gi|219684845|ref|ZP_03539787.1| ribosomal protein S2 [Borrelia garinii PBr] gi|219685281|ref|ZP_03540100.1| ribosomal protein S2 [Borrelia garinii Far04] gi|219671790|gb|EED28845.1| ribosomal protein S2 [Borrelia garinii PBr] gi|219673054|gb|EED30074.1| ribosomal protein S2 [Borrelia garinii Far04] Length = 262 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 101/262 (38%), Positives = 169/262 (64%), Gaps = 4/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKFKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEEDSQSS 260 E + + + +EE +S Sbjct: 241 LMKEIEIKNDKSDSIEERRSNS 262 >gi|91214955|ref|ZP_01251927.1| 30S ribosomal protein S2 [Psychroflexus torquis ATCC 700755] gi|91186560|gb|EAS72931.1| 30S ribosomal protein S2 [Psychroflexus torquis ATCC 700755] Length = 313 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 101/282 (35%), Positives = 163/282 (57%), Gaps = 9/282 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P ++ LL++GV FGH WNP M Y++ ERN HII+L +TV +++A + +S Sbjct: 1 MANP-IVVKDLLDAGVHFGHLTRRWNPNMAPYVYMERNGIHIINLYKTVAKMEEAGEALS 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA + V + ++R+ + +W GGM+TN+ T+ +S++K+ ++ Sbjct: 60 RIAASGRKILFVATKKQAKEIVAQESQRAQMPYITERWPGGMLTNFVTIRKSVKKMATVD 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I +M LP +FVVDT RE +A++EA++ Sbjct: 120 RMKKDGTFNSLSKKERLQVDRMRAKLEKNLGSISEMSRLPAAIFVVDTLREHIAVKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH--SYMGADT 237 L IP+ A+VDTNSNP VDY IP NDD+S+SI + + ++G+ + G D Sbjct: 180 LNIPVFALVDTNSNPRDVDYAIPANDDASKSIHKVMSYMTDSILEGLNERKDGKDSGEDK 239 Query: 238 KSAGETVVHSKEGMQLEED-----SQSSESSVLDGQEVAVVP 274 + + ++ E E ++ E+ + P Sbjct: 240 PAKAKKEANADEKPAKAEKKATAVEEAPENKAKEETNTEAQP 281 >gi|150024557|ref|YP_001295383.1| 30S ribosomal protein S2 [Flavobacterium psychrophilum JIP02/86] gi|166225271|sp|A6GWU2|RS2_FLAPJ RecName: Full=30S ribosomal protein S2 gi|149771098|emb|CAL42565.1| 30S ribosomal protein S2 [Flavobacterium psychrophilum JIP02/86] Length = 266 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 107/268 (39%), Positives = 161/268 (60%), Gaps = 3/268 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + ++ LLE+GV FGH W+P M YI+ ERN HII+L +T +++A + + Sbjct: 1 MA-NKIEVKDLLEAGVHFGHMTRKWDPNMAPYIYMERNGIHIINLYKTAAKIEEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E A + + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVAEKAAAANMPYITERWPGGMLTNFVTIRKAVKKMSTID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I DM LP +FVVD E +AI+EA++ Sbjct: 120 RMKKDGTFMTLSKKERLQVDRLRAKLEKNLGSISDMSRLPAALFVVDIKAEHIAIKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+P LV+YVIP NDD+S+SI LV A IDG+A + S ADT + Sbjct: 180 LNIPVFAMVDTNSDPRLVEYVIPANDDASKSIDKILTLVTEAIIDGLANRTSDKEADT-T 238 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 E + +E + +E++ Sbjct: 239 TEEVAQEEVTDTKADEKAIVAEAAKTKE 266 >gi|195928673|gb|ACG56016.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928683|gb|ACG56021.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928703|gb|ACG56031.1| ribosomal protein subunit 2 [Agalinis decemloba] gi|195928757|gb|ACG56058.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928805|gb|ACG56082.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928807|gb|ACG56083.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928809|gb|ACG56084.1| ribosomal protein subunit 2 [Agalinis tenella] gi|195928811|gb|ACG56085.1| ribosomal protein subunit 2 [Agalinis tenella] Length = 218 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + Sbjct: 1 NIKLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP Sbjct: 121 TGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD SI + + A Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNKLVFA 218 >gi|6650162|gb|AAF21749.1|AF055161_1 ribosomal protein subunit 2 [Hemiphragma heterophyllum] Length = 202 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLDRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|2734671|gb|AAB93688.1| ribosomal protein subunit 2 [Hemimeris sabulosa] Length = 204 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|48478766|ref|YP_024374.1| ribosomal protein S2 [Saccharum hybrid cultivar SP-80-3280] gi|50812521|ref|YP_054624.1| ribosomal protein S2 [Saccharum officinarum] gi|118614485|ref|YP_899400.1| ribosomal protein S2 [Sorghum bicolor] gi|242057457|ref|XP_002457874.1| hypothetical protein SORBIDRAFT_03g017620 [Sorghum bicolor] gi|75290179|sp|Q6ENX0|RR2_SACOF RecName: Full=30S ribosomal protein S2, chloroplastic gi|75291228|sp|Q6L3A4|RR2_SACHY RecName: Full=30S ribosomal protein S2, chloroplastic gi|209573645|sp|A1E9R7|RR2_SORBI RecName: Full=30S ribosomal protein S2, chloroplastic gi|48478668|gb|AAT44688.1| ribosomal protein S2 [Saccharum hybrid cultivar SP80-3280] gi|49659505|dbj|BAD27286.1| ribosomal protein S2 [Saccharum hybrid cultivar NCo 310] gi|118201119|gb|ABK79489.1| ribosomal protein S2 [Sorghum bicolor] gi|194477485|gb|ACF74836.1| ribosomal protein S2 [Chasmanthium latifolium] gi|241929849|gb|EES02994.1| hypothetical protein SORBIDRAFT_03g017620 [Sorghum bicolor] gi|307697309|gb|ADN86109.1| ribosomal protein S2 [Chasmanthium latifolium] Length = 236 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA RS + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRSRCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFHHLPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAISEGRS 230 >gi|282891688|ref|ZP_06300174.1| hypothetical protein pah_c189o007 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498423|gb|EFB40756.1| hypothetical protein pah_c189o007 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 268 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 93/223 (41%), Positives = 145/223 (65%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + TI+ LLE+G FGH+ WNPKM+R+IF ERN +IIDL++T+ ++ A +++ Sbjct: 6 TYQEVTIKDLLEAGAHFGHQKRRWNPKMKRFIFEERNGLYIIDLAKTLQQIRYAKEIVKQ 65 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 V ILFV TK QA V + A++ ++ V +WLGGM+TN T+ QSI+KL +E+ Sbjct: 66 VVESHKSILFVGTKKQAKAVVRDLAEQCGEFYVCERWLGGMLTNLTTIRQSIKKLERIEK 125 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +GFTKKE + +++ KL++ L G+R M P L+ VVD ++E LA+ EA +L Sbjct: 126 RIAAGTEGFTKKEFSLLTKEQIKLEKNLSGVRGMRKPPGLVIVVDPSKEHLAVAEANKLG 185 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++ +VDTN +PD ++YVI NDD+ +S+ L +A + I+ Sbjct: 186 IPVMGLVDTNCDPDPIEYVIACNDDALKSVKLIVQALAQSIIE 228 >gi|2734645|gb|AAB93675.1| ribosomal protein subunit 2 [Alectra sessiliflora] Length = 204 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|224531751|ref|ZP_03672383.1| ribosomal protein S2 [Borrelia valaisiana VS116] gi|224511216|gb|EEF81622.1| ribosomal protein S2 [Borrelia valaisiana VS116] Length = 262 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 99/261 (37%), Positives = 168/261 (64%), Gaps = 4/261 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKLKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEEDSQS 259 E + + + +EE + Sbjct: 241 LMKEIEIKNDKSDSIEEGESN 261 >gi|313203802|ref|YP_004042459.1| SSU ribosomal protein s2p [Paludibacter propionicigenes WB4] gi|312443118|gb|ADQ79474.1| SSU ribosomal protein S2P [Paludibacter propionicigenes WB4] Length = 277 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 91/267 (34%), Positives = 150/267 (56%), Gaps = 1/267 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +LLE+G FGH WNP M YIF ERN+ HIIDL +TV + +A + Sbjct: 1 MSRTNFEELLEAGCHFGHLKRKWNPAMAPYIFMERNDIHIIDLHKTVVKIDEAAAALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA D V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGRKILFVATKKQAKDVVADKASAVGMPYITERWAGGMLTNFPTIRKAVKKMTTIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E+L I R+R+KL++ L I D+ LP +FVVD +E +A+ EA+RL Sbjct: 121 ATDGTFDNISKREKLQITRQREKLEKNLGSIADLTRLPSALFVVDVMKEHIAVLEAQRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNSNP+ +D+VIP NDD+++S+ + + +A +G+ + + Sbjct: 181 IPVFGIVDTNSNPNNIDFVIPANDDATKSVDVILSAMVAAIQEGLEERKVEKVDTEAAEA 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 K + +Q + L+ Sbjct: 241 PVAKEPKSRISKRPRTQKEDEEALNAN 267 >gi|212690772|ref|ZP_03298900.1| hypothetical protein BACDOR_00259 [Bacteroides dorei DSM 17855] gi|237723690|ref|ZP_04554171.1| 30S ribosomal protein S2 [Bacteroides sp. D4] gi|265756812|ref|ZP_06090800.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_33FAA] gi|212666649|gb|EEB27221.1| hypothetical protein BACDOR_00259 [Bacteroides dorei DSM 17855] gi|229437901|gb|EEO47978.1| 30S ribosomal protein S2 [Bacteroides dorei 5_1_36/D4] gi|263233598|gb|EEZ19218.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_33FAA] Length = 279 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 143/241 (59%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPSMAPYIFMERNGIHIIDLHKTVAKVDEAADALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P VD+VIP NDD+++S+ + D A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSDPSNVDFVIPANDDATKSVEVILDACCGAIAEGLEERKAEK-VDMEAAG 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|2734663|gb|AAB93684.1| ribosomal protein subunit 2 [Digitalis purpurea] Length = 204 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLDRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTALPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|195928775|gb|ACG56067.1| ribosomal protein subunit 2 [Agalinis plukenetii] gi|195928777|gb|ACG56068.1| ribosomal protein subunit 2 [Agalinis plukenetii] Length = 218 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 2/217 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++L++GVQFGH WNPKM YI+ +R HI +L++TV L +A ++ D + Sbjct: 1 NINLKEMLKAGVQFGHETKKWNPKMAPYIYAKRKGIHITNLTRTVHFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDC-VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-EL 122 G + L V TK +A+ V AA ++ +CV KWLGGM+TNW T +QK RDL E Sbjct: 61 SGKQFLIVGTKKKAAPLLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRIEQ 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K++ ++R+ +L+ L GI+ M GLPD++ +V + E A++E L I Sbjct: 121 KTGRLNHLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVGQHEEYTALRECITLGI 180 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 P + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 181 PTICLIDTNCDPDLADMPIPANDDARSSIRLILNKLV 217 >gi|290790842|gb|ADD63098.1| ribosomal protein S2 [Microlaena stipoides] Length = 249 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 20 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAAS 79 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 80 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 139 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 140 MGKFHHLPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 200 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 243 >gi|195928815|gb|ACG56087.1| ribosomal protein subunit 2 [Agalinis tenuifolia] Length = 204 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 121/204 (59%), Gaps = 1/204 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDS 207 + ++DTN +PDL D IP NDD+ Sbjct: 181 TICLIDTNCDPDLADISIPANDDA 204 >gi|10179726|gb|AAG13855.1| ribosomal protein subunit 2 [Globularia cordifolia] Length = 202 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA R+ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVLKRQLSRLQTYLGGIQYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|71904426|ref|YP_281229.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS6180] gi|123747738|sp|Q48QY6|RS2_STRPM RecName: Full=30S ribosomal protein S2 gi|71803521|gb|AAX72874.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS6180] Length = 255 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 163/253 (64%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEGRQGEDADVAFEADIQA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|21911318|ref|NP_665586.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS315] gi|28896691|ref|NP_803041.1| 30S ribosomal protein S2 [Streptococcus pyogenes SSI-1] gi|50915125|ref|YP_061097.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS10394] gi|139474538|ref|YP_001129254.1| 30S ribosomal protein S2 [Streptococcus pyogenes str. Manfredo] gi|25009191|sp|Q8K5L2|RS2_STRP3 RecName: Full=30S ribosomal protein S2 gi|57014113|sp|Q5X9J9|RS2_STRP6 RecName: Full=30S ribosomal protein S2 gi|166226760|sp|A2RGS9|RS2_STRPG RecName: Full=30S ribosomal protein S2 gi|21905533|gb|AAM80389.1| 30S ribosomal protein S2 [Streptococcus pyogenes MGAS315] gi|28811945|dbj|BAC64874.1| 30S ribosomal protein S2 [Streptococcus pyogenes SSI-1] gi|50904199|gb|AAT87914.1| SSU ribosomal protein S2P [Streptococcus pyogenes MGAS10394] gi|134272785|emb|CAM31061.1| 30S ribosomal protein S2 [Streptococcus pyogenes str. Manfredo] Length = 255 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 164/253 (64%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEGRQGEDADVAFEADTQA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEDIVEVVEGD 253 >gi|333029315|ref|ZP_08457376.1| ribosomal protein S2 [Bacteroides coprosuis DSM 18011] gi|332739912|gb|EGJ70394.1| ribosomal protein S2 [Bacteroides coprosuis DSM 18011] Length = 279 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 101/271 (37%), Positives = 152/271 (56%), Gaps = 2/271 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + + Sbjct: 1 MSRTNFEELLEAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKEL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA + V E A V +W GGM+TN+ T+ ++++K+ ++ L Sbjct: 61 AKAGKKVLFVATKKQAKEIVAEKADSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDRL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL++ L I D+ LP +FVVD +E +AI+EA RL Sbjct: 121 TKDGTYDNLSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKEDIAIREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNSNP VDY+IP NDD+++SI L A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSNPKNVDYIIPANDDATKSIELIIGKCCEAIKEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 E + +E L+ + A Sbjct: 240 EAPAAKGKRKATRARLDKAEQEALNASKAAA 270 >gi|10179714|gb|AAG13849.1| ribosomal protein subunit 2 [Barleria prionitis] Length = 202 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISARRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA R+ +CVN KWLGGM+TNW T + + RD E K+ Sbjct: 61 KNKAADSVARAAIRARCHCVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMAGLPDIVIIVDQHEEYTALRECLTLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|86131446|ref|ZP_01050044.1| 30S ribosomal protein S2 [Dokdonia donghaensis MED134] gi|85817891|gb|EAQ39059.1| 30S ribosomal protein S2 [Dokdonia donghaensis MED134] Length = 266 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 150/242 (61%), Gaps = 2/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA I++LL++GV FGH W+P M YI+ ERN HII+L +T +++ + + Sbjct: 1 MA-NNIEIKELLDAGVHFGHLTRRWDPNMAPYIYMERNGIHIINLYKTAAKIEETCEALQ 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E A+ + + +W GGM+TN+ T+ ++++K++ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVAEKARNANMPYITERWPGGMLTNFVTIRKAVKKMQTID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKE+L + R R+KL++ L I DM LP +FVVD RE +AI+EA++ Sbjct: 120 RMKQDGRFDTLSKKEKLQMNRLREKLEKNLGSISDMTRLPGALFVVDIKREHIAIKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VDY+IP NDD+S+SI V+ A G+A + + A + Sbjct: 180 LNIPIFAMVDTNSDPREVDYLIPANDDASKSIDKIVGFVSDAVSAGLADRKAGKDAQKEG 239 Query: 240 AG 241 A Sbjct: 240 AD 241 >gi|225551899|ref|ZP_03772839.1| ribosomal protein S2 [Borrelia sp. SV1] gi|225370897|gb|EEH00327.1| ribosomal protein S2 [Borrelia sp. SV1] Length = 260 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 100/260 (38%), Positives = 168/260 (64%), Gaps = 4/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIVTMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQKV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKSKLAKNLTGIKDMEILPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTK 238 IPI++VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEED 240 Query: 239 SAGETVVHSKEGMQLEEDSQ 258 E + + + +EE + Sbjct: 241 LMKEIEIKNDKSDSIEERGE 260 >gi|57229305|gb|AAW45730.1| ribosomal protein subunit 2 [Cistanche phelypaea] Length = 214 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 1/214 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPK+ YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A++ V AA ++ + VN KWLGGM+TNW T + + RD E Sbjct: 61 RGKQFLIVGTKNKAANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +++ ++R+ +L+ L GI+ M LPD++ +VD + E A+QE L IP Sbjct: 121 MGRLNRLPRRDSAVVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALQECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 + ++DTN +PDL D IP NDD+ SI L + Sbjct: 181 TICLIDTNCDPDLADISIPANDDAISSIRLILNK 214 >gi|189183506|ref|YP_001937291.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Ikeda] gi|189180277|dbj|BAG40057.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Ikeda] Length = 292 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 108/250 (43%), Positives = 161/250 (64%), Gaps = 4/250 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI-S 60 + TI +LL++G+ +GH+ WNPKM YI+ +R++ HII+L T + +VI Sbjct: 9 TISSVTISELLDAGIHYGHKASRWNPKMAPYIYGKRDDVHIINLDYTASQIDVVSKVIYK 68 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + GRILFV T+ D V + A+ QY V +WLGGM+TNW TVS++I KL LE Sbjct: 69 EIKEKNGRILFVDTRR-HRDIVAQYAENCGQYYVTHRWLGGMLTNWVTVSKAINKLDQLE 127 Query: 121 ELLNK--ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + L + G+TK+E L+++R RD L+R+ GIR+MGG P L+ V+D N++ +A++EAR Sbjct: 128 KKLADPEKIAGYTKREILSMQRMRDNLQRSFGGIRNMGGKPTLLIVMDINKDHIAVKEAR 187 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 R +IPI+A+VDTNS+PDLVDY IPGNDD+ RSI L+C + + A + I + G D Sbjct: 188 REKIPIIAIVDTNSDPDLVDYPIPGNDDAIRSIRLYCKIFSDAVLLAIEHMLAASGVDLG 247 Query: 239 SAGETVVHSK 248 + + + Sbjct: 248 AINDDSPSER 257 >gi|269991250|emb|CAX12428.1| 30S ribosomal protein S2 [Fucus vesiculosus] Length = 231 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 91/228 (39%), Positives = 136/228 (59%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + QLLE+GV FGH+ WNPKM YI+ ERN HI+DL QT L++A Sbjct: 1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+ LFV TK +AS + A++ + +N +WLGG +TNW T+ IQ+L +LEE Sbjct: 61 SAKNQTFLFVGTKKRASSLIASEAQKCGAFYINHRWLGGTLTNWITIKGRIQRLNNLEEQ 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + KKE N++++ +KLK+ +GI+ M +PD++ ++D RE +AIQEA L Sbjct: 121 EKLTSFKNLPKKEASNLKKELEKLKKYFNGIKGMKKIPDILVIIDQKREIIAIQEALSLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IPI++++DTN +P+L IPGNDDS RSI ++ + G Sbjct: 181 IPIISIIDTNCDPNLATIPIPGNDDSIRSIKYIIKNISDSICLGQQNS 228 >gi|10179730|gb|AAG13857.1| ribosomal protein subunit 2 [Tetranema mexicanum] Length = 202 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|317504784|ref|ZP_07962743.1| 30S ribosomal protein S2 [Prevotella salivae DSM 15606] gi|315664115|gb|EFV03823.1| 30S ribosomal protein S2 [Prevotella salivae DSM 15606] Length = 272 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 139/233 (59%), Gaps = 1/233 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDQLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKAI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA D V + A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKDIVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +F+VD +E +A++EA RL Sbjct: 121 MNDGTFSNLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFIVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP+ +VDTNS+P +D+VIP NDD+ S+ V A +G+ + + Sbjct: 181 IPVFGIVDTNSDPKNIDFVIPANDDAKDSVETILTAVCGAIAEGLEERKAEKA 233 >gi|189461536|ref|ZP_03010321.1| hypothetical protein BACCOP_02195 [Bacteroides coprocola DSM 17136] gi|189431742|gb|EDV00727.1| hypothetical protein BACCOP_02195 [Bacteroides coprocola DSM 17136] Length = 294 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 151/263 (57%), Gaps = 2/263 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 16 TMSRVNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAAEALKQ 75 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++ Sbjct: 76 IAKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDK 135 Query: 122 LLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L N +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL Sbjct: 136 LTNDGTYSNLSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVIDVLKENIAVREANRL 195 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ A+VDTNS+P VD+VIP NDD+++S+ + D +A +G+ + + D ++A Sbjct: 196 GIPVFAIVDTNSDPSNVDFVIPANDDATKSVEVILDACCAAMAEGLEERKAEK-VDMEAA 254 Query: 241 GETVVHSKEGMQLEEDSQSSESS 263 GE + + + +E Sbjct: 255 GENAPKAAKKKTTKARMDKAEED 277 >gi|150004193|ref|YP_001298937.1| 30S ribosomal protein S2 [Bacteroides vulgatus ATCC 8482] gi|254884790|ref|ZP_05257500.1| 30S ribosomal protein S2 [Bacteroides sp. 4_3_47FAA] gi|294775223|ref|ZP_06740747.1| ribosomal protein S2 [Bacteroides vulgatus PC510] gi|319644147|ref|ZP_07998672.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_40A] gi|166225241|sp|A6L0V1|RS2_BACV8 RecName: Full=30S ribosomal protein S2 gi|149932617|gb|ABR39315.1| 30S ribosomal protein S2 [Bacteroides vulgatus ATCC 8482] gi|254837583|gb|EET17892.1| 30S ribosomal protein S2 [Bacteroides sp. 4_3_47FAA] gi|294450928|gb|EFG19404.1| ribosomal protein S2 [Bacteroides vulgatus PC510] gi|317384269|gb|EFV65240.1| 30S ribosomal protein S2 [Bacteroides sp. 3_1_40A] Length = 279 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 95/241 (39%), Positives = 143/241 (59%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPSMAPYIFMERNGIHIIDLHKTVAKVDEAADALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVIDVLKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P VD+VIP NDD+++S+ + D A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSDPSNVDFVIPANDDATKSVEVILDACCGAIAEGLEERKAEK-VDMEAAG 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|2734669|gb|AAB93687.1| ribosomal protein subunit 2 [Hyobanche sanguinea] Length = 204 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNHLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|2734695|gb|AAB93699.1| ribosomal protein subunit 2 [Scrophularia californica] Length = 204 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTSRFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|6650168|gb|AAF21752.1|AF055164_1 ribosomal protein subunit 2 [Kohleria digitaliflora] Length = 202 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKK 133 K++A+D V AA R+ +CVN KWLGGM+TNW T + K RDL K K+ Sbjct: 61 KNKAADSVASAAIRARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKKGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMIGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|119025015|gb|ABA42627.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 281 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 154/268 (57%), Gaps = 5/268 (1%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E L N G TKKE + ++ KL L+G+R M LP L+ V+D E++A+ EA + Sbjct: 121 ELDLEASNSGLTKKELALLAKRHRKLLNNLEGVRHMNSLPGLLIVIDPGYERIAVAEAGK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++A+VDTN +P +++VIP NDDS +SI L +++ A ID R +G S Sbjct: 181 LGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVLKDAVIDAKKR----LGIGILS 236 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 E + L E+S G Sbjct: 237 PVRPAERPAEELPLPTGEAQDEASSKKG 264 >gi|6650118|gb|AAF21727.1|AF055139_1 ribosomal protein subunit 2 [Macranthera flammea] gi|6650120|gb|AAF21728.1|AF055140_1 ribosomal protein subunit 2 [Orthocarpus bracteosus] gi|6650122|gb|AAF21729.1|AF055141_1 ribosomal protein subunit 2 [Seymeria pectinata] Length = 202 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E K+ Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|6650158|gb|AAF21747.1|AF055159_1 ribosomal protein subunit 2 [Callitriche hermaphroditica] Length = 202 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++ ++ V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKTANSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRFNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|282877312|ref|ZP_06286143.1| ribosomal protein S2 [Prevotella buccalis ATCC 35310] gi|281300590|gb|EFA92928.1| ribosomal protein S2 [Prevotella buccalis ATCC 35310] Length = 296 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 94/273 (34%), Positives = 155/273 (56%), Gaps = 3/273 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDQLLQAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G ++LFVATK QA D V E A VN +W GG +TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGRKVLFVATKKQAKDIVAEKAASVNMPYVNERWAGGTLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MADGTFENISKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVCKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P +D+VIP NDD+ S+ + A +G+ + + + +A Sbjct: 181 IPVFAIVDTNSDPKNIDFVIPANDDAKDSVEVILTACCQAIAEGLEERKAEKADEKAAAE 240 Query: 242 ETVVHSKEGMQLEEDS--QSSESSVLDGQEVAV 272 + ++ + + Q+ E+ +G E Sbjct: 241 QQEEAAEAKPKRARKARKQTEEAEKAEGTEEVA 273 >gi|209560207|ref|YP_002286679.1| 30S ribosomal protein S2 [Streptococcus pyogenes NZ131] gi|229559897|sp|B5XIY5|RS2_STRPZ RecName: Full=30S ribosomal protein S2 gi|209541408|gb|ACI61984.1| SSU ribosomal protein S2p (SAe) [Streptococcus pyogenes NZ131] Length = 255 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 163/253 (64%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE GV FGH+ WNPKM +YIF ERN H+IDL QTV + +A + + D Sbjct: 1 MAVISMKQLLECGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A ILFV TK QA++ V + A R+ QY +N +WLGG +TNW T+ + I +L++++ + Sbjct: 61 AANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L Sbjct: 121 EEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+VA+VDTN++PD +D +IP NDD+ R++ L +A A I+G + + + + + Sbjct: 181 IPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEGRQGEDADIAFEADTQA 240 Query: 242 ETVVHSKEGMQLE 254 +++ E ++ + Sbjct: 241 DSIEEIVEVVEGD 253 >gi|237708157|ref|ZP_04538638.1| 30S ribosomal protein S2 [Bacteroides sp. 9_1_42FAA] gi|229457710|gb|EEO63431.1| 30S ribosomal protein S2 [Bacteroides sp. 9_1_42FAA] Length = 279 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 143/241 (59%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPSMAPYIFMERNGIHIIDLHKTVAKVDEAADALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P VD+VIP NDD+++S+ + D A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSDPSNVDFVIPANDDATKSVEVILDACCGAIAEGLEERKAEK-IDMEAAG 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|197131510|gb|ACH47273.1| ribosomal protein S2 [Erodium chrysanthum] Length = 252 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 130/226 (57%), Gaps = 3/226 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYI--FCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +L+ +GV FGH+ WNPKM +I + + THI +L++T L +A ++ D Sbjct: 7 NIQLEELIAAGVHFGHKINKWNPKMAPFISIYPKYEGTHISNLTRTARRLAEACNLVFDA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 +RG L V TK +A++ V+ AA+R+ + VN KWLGG++TNW T ++K RD + Sbjct: 67 ASRGQSFLLVGTKKEAANSVLRAARRARCHYVNKKWLGGILTNWSTTQSMLRKFRDLRTQ 126 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K++ ++R+ L++ L G++ M GLP ++ VVD RE A++E L Sbjct: 127 QKEGGLRRLPKRDAALLKRQLSHLQKYLGGVQYMTGLPQIVIVVDQQREFTALRECITLE 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IP + ++DT+ +PDLVD IP NDDS SI + + A G + Sbjct: 187 IPTIGLIDTDCDPDLVDLPIPANDDSVSSIQFILNKLVFAICKGRS 232 >gi|11467185|ref|NP_043018.1| ribosomal protein S2 [Zea mays] gi|133910|sp|P16037|RR2_MAIZE RecName: Full=30S ribosomal protein S2, chloroplastic gi|12409|emb|CAA36512.1| ribosomal protein S2 (AA 1-236) [Zea mays] gi|12483|emb|CAA35198.1| unnamed protein product [Zea mays] gi|902215|emb|CAA60279.1| ribosomal protein S2 [Zea mays] Length = 236 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA RS + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRSRCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A+QE L IP Sbjct: 127 MGKFHHLPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALQECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLVDTNCDPDLANISIPANDDTMTSIRLILNKLVFAISEGRS 230 >gi|325955158|ref|YP_004238818.1| ribosomal protein S2 [Weeksella virosa DSM 16922] gi|323437776|gb|ADX68240.1| ribosomal protein S2 [Weeksella virosa DSM 16922] Length = 249 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 97/249 (38%), Positives = 151/249 (60%), Gaps = 1/249 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LL +GV FGH WNP M YIF E+N HIIDL +T L +A + + Sbjct: 1 MAKINVKDLLNAGVHFGHLTRKWNPHMAPYIFMEKNGIHIIDLHKTAVKLDEASEALGKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V + A+ + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGRKILFVATKKQAKDVVAKHAEEVNMPYITERWPGGMLTNFVTIRKAVKKMNSIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +KKERL ++R+R KL++ L I DM LP +FVVD RE +AI EA++L Sbjct: 121 KKDGTFETLSKKERLQVDRQRAKLEKNLGSIADMTRLPSAVFVVDIVREHIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTN++P +VDY IP NDD+S+SI + VA + G++ + + + Sbjct: 181 IPVFAMVDTNTDPRIVDYAIPANDDASKSIDIILSTVAESIKTGLSTRKAEKEKAKEDKE 240 Query: 242 ETVVHSKEG 250 E V ++E Sbjct: 241 EGVEKTQEA 249 >gi|10179754|gb|AAG13869.1| ribosomal protein subunit 2 [Halleria lucida] Length = 202 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|325859804|ref|ZP_08172934.1| ribosomal protein S2 [Prevotella denticola CRIS 18C-A] gi|327312987|ref|YP_004328424.1| 30S ribosomal protein S2 [Prevotella denticola F0289] gi|325482730|gb|EGC85733.1| ribosomal protein S2 [Prevotella denticola CRIS 18C-A] gi|326945255|gb|AEA21140.1| ribosomal protein S2 [Prevotella denticola F0289] Length = 277 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 91/228 (39%), Positives = 137/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDQLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKGF 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 ARSGKKILFVATKKQAKEVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MNDGTFANLSKRELLQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ +VDTNS+P +DYVIP NDD+ S+ + A +G+ + Sbjct: 181 IPVFGIVDTNSDPRNIDYVIPANDDAKDSVEVILAACCDAIAEGLEER 228 >gi|6650156|gb|AAF21746.1|AF055158_1 ribosomal protein subunit 2 [Selago thunbergii] Length = 202 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECVTLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|10179720|gb|AAG13852.1| ribosomal protein subunit 2 [Angelonia pubescens] Length = 202 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHGTRKWNPKMGPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PD D IP NDD+ SI L Sbjct: 181 PDFADISIPANDDAISSIRLIL 202 >gi|332883240|gb|EGK03523.1| 30S ribosomal protein S2 [Dysgonomonas mossii DSM 22836] Length = 283 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 154/276 (55%), Gaps = 3/276 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+GV FGH WNP M YIF ERN HIIDL +T+ ++A + Sbjct: 1 MAKLEFDQLLEAGVHFGHLKRKWNPAMAPYIFMERNGIHIIDLYKTIAKTEEAAAALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA V + A+ V +W GGM+TN+ T+ ++I+K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKQVVTDLAQSVNMPYVVERWPGGMLTNFPTIRKAIKKMSTIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+ERL + R+R KL++ L I+D+ LP +FVVD +E +A++EA RL Sbjct: 121 IKDGTFDTLSKRERLQVTRQRAKLEKTLGSIQDLTRLPSALFVVDVMKEHIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG--ADTKS 239 IP+ A+VDTNS+P+ +D+VIP NDD+++SI L + +G+ + A ++ Sbjct: 181 IPVFAMVDTNSSPEDIDFVIPANDDAAKSIELILGSLCEGIKEGLEERKIEKADSAAAEA 240 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E +E ++ + AV + Sbjct: 241 QDEEGAPRRERKAKAGAKKAVTKEDQEAINAAVASK 276 >gi|6650154|gb|AAF21745.1|AF055157_1 ribosomal protein subunit 2 [Myoporum parvifolium] gi|10179744|gb|AAG13864.1| ribosomal protein subunit 2 [Alonsoa unilabiata] gi|10179748|gb|AAG13866.1| ribosomal protein subunit 2 [Buddleja davidii] Length = 202 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|6650160|gb|AAF21748.1|AF055160_1 ribosomal protein subunit 2 [Hippuris vulgaris] Length = 202 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|313206968|ref|YP_004046145.1| SSU ribosomal protein s2p [Riemerella anatipestifer DSM 15868] gi|312446284|gb|ADQ82639.1| SSU ribosomal protein S2P [Riemerella anatipestifer DSM 15868] gi|315024044|gb|EFT37046.1| SSU ribosomal protein S2p (SAe) [Riemerella anatipestifer RA-YM] Length = 250 Score = 278 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 93/228 (40%), Positives = 147/228 (64%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LLE+GV FGH WNP M YIF E+N HIIDL +T L++A + Sbjct: 1 MAKVNVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIIDLHKTAVKLEEACSALEKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 TSAGRKVLFVATKKQAKEVVAKHASELNMPYITERWPGGMLTNFVTIRKAVKKMNAIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +KKERL ++R+R L++ L I DM LP +FVVD RE +A+ EA++L Sbjct: 121 KKDGTFETLSKKERLQVDRQRANLEKNLGSIADMVRLPSAIFVVDIMREHIAVTEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ A+VDTNS+P VDYVIPGNDD+S+SI + V++A +G+ ++ Sbjct: 181 IPVFAIVDTNSDPRKVDYVIPGNDDASKSIDMILGQVSAAIKEGLTQR 228 >gi|2734679|gb|AAB93691.1| ribosomal protein subunit 2 [Melasma scabrum] Length = 202 Score = 278 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|86140802|ref|ZP_01059361.1| 30S ribosomal protein S2 [Leeuwenhoekiella blandensis MED217] gi|85832744|gb|EAQ51193.1| 30S ribosomal protein S2 [Leeuwenhoekiella blandensis MED217] Length = 261 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 100/257 (38%), Positives = 156/257 (60%), Gaps = 3/257 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LL++GV FGH W+P M YI+ ERN HII+L +T L +A + +S A G Sbjct: 7 VKDLLDAGVHFGHLTRRWDPNMAPYIYMERNGIHIINLYKTAAKLNEASEALSKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFVATK QA + V E A R+ + +W GGM+TN+ T+ ++++K++ ++ + + Sbjct: 67 KILFVATKKQAKEIVAEQATRAKMPYITERWPGGMLTNFVTIRKAVKKMQTVDRMKQDGR 126 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L + R R+KL++ L I DM LP +FVVD RE +AI+EA++L IPI A Sbjct: 127 FDSLSKKEQLQMNRMREKLEKNLGSIEDMTRLPGALFVVDIKREHIAIKEAQKLNIPIFA 186 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTNS+P VDY IP NDD+S+SI VA A ++G++ + + G + + G+ Sbjct: 187 MVDTNSDPRQVDYAIPSNDDASKSIEKIISNVADAIVEGLSERKA--GKEKSAEGKKDKA 244 Query: 247 SKEGMQLEEDSQSSESS 263 +K + + E Sbjct: 245 AKPAKAKAKAVANDEEE 261 >gi|10179750|gb|AAG13867.1| ribosomal protein subunit 2 [Nemesia strumosa] Length = 202 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|10179746|gb|AAG13865.1| ribosomal protein subunit 2 [Aptosimum sp. KES PCR3] Length = 202 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL + K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKRGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|294675268|ref|YP_003575884.1| 30S ribosomal protein S2 [Prevotella ruminicola 23] gi|294474152|gb|ADE83541.1| ribosomal protein S2 [Prevotella ruminicola 23] Length = 269 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 146/259 (56%), Gaps = 5/259 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YI+ ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDQLLQAGCHFGHLKRKWNPAMAPYIYTERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK Q + V E A V +W GGM+TN+ T+ ++++K+ +++ Sbjct: 61 AKSGKKILFVATKKQTKEVVAEKAASINMPYVIERWPGGMLTNFPTIRKAVKKMANIDRL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MQDGTYSNLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH----SYMGADT 237 IP+ +VDTNS+P+ +D+VIP NDD+ S+ + +A +GI + AD Sbjct: 181 IPVFGIVDTNSDPNNIDFVIPANDDAKDSVEAILNACCTAIAEGIEERKVEKADEKAADA 240 Query: 238 KSAGETVVHSKEGMQLEED 256 ++ GE + + +D Sbjct: 241 QAEGEEPKAKRAPRKARKD 259 >gi|212550643|ref|YP_002308960.1| 30S ribosomal protein S2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229564292|sp|B6YQS7|RS2_AZOPC RecName: Full=30S ribosomal protein S2 gi|212548881|dbj|BAG83549.1| 30S ribosomal protein S2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 262 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 152/259 (58%), Gaps = 1/259 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + QLLE+GV FGH WNP M YIF ER HIIDL +T+ + +A I Sbjct: 1 MLRVSFEQLLEAGVHFGHLKRKWNPAMAPYIFMERKGIHIIDLHKTILKIDEASSAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G +ILFVATK QA V + V W GGM+TN+ T+ ++IQK+ ++ + Sbjct: 61 IRSGRKILFVATKKQAKQVVADKVSFVGMPYVTEHWAGGMLTNFPTIRKAIQKMTVIDRM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+ERL I R+R KL++ L I D+ LP +FVVD +E++A+ EA+RL Sbjct: 121 AHDGTFDLLSKRERLQITRQRAKLEKNLGSIADLKRLPSALFVVDVMKERIAVSEAKRLD 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNSNP+ +D++IP NDD++ SI + + + A I+G + + ++ Sbjct: 181 IPVFAIVDTNSNPNGIDFIIPANDDATSSIEVILNAICDAIIEGKEERMMDTSINNENKE 240 Query: 242 ETVVHSKEGMQLEEDSQSS 260 +TV ++ ++E S+ Sbjct: 241 KTVSVFRKRTKIEGRSKKD 259 >gi|302344890|ref|YP_003813243.1| ribosomal protein S2 [Prevotella melaninogenica ATCC 25845] gi|302149276|gb|ADK95538.1| ribosomal protein S2 [Prevotella melaninogenica ATCC 25845] Length = 271 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 150/271 (55%), Gaps = 12/271 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDQLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKEVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MNDGTFSNLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA- 240 IP+ +VDTNS+P +DYVIP NDD+ S+ A +G+ + + + +A Sbjct: 181 IPVFGIVDTNSDPKNIDYVIPANDDAKDSVEAILAACCGAIAEGLEERKAEKADEKAAAE 240 Query: 241 ----------GETVVHSKEGMQLEEDSQSSE 261 ++E + E ++ ++E Sbjct: 241 QAEEAAEAKPKRAARKAEEAPKAENEAPAAE 271 >gi|195928681|gb|ACG56020.1| ribosomal protein subunit 2 [Agalinis acuta] Length = 218 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + Sbjct: 1 NIKLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP Sbjct: 121 TGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD SI + + Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNKLV 216 >gi|325335595|gb|ADZ11869.1| Ribosomal protein S2 [Riemerella anatipestifer RA-GD] Length = 264 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 93/229 (40%), Positives = 147/229 (64%), Gaps = 1/229 (0%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + + ++ LLE+GV FGH WNP M YIF E+N HIIDL +T L++A + Sbjct: 14 TMAKVNVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIIDLHKTAVKLEEACSALEK 73 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ +++ Sbjct: 74 ITSAGRKVLFVATKKQAKEVVAKHASELNMPYITERWPGGMLTNFVTIRKAVKKMNAIDK 133 Query: 122 L-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + + +KKERL ++R+R L++ L I DM LP +FVVD RE +A+ EA++L Sbjct: 134 MKKDGTFETLSKKERLQVDRQRANLEKNLGSIADMVRLPSAIFVVDIMREHIAVTEAKKL 193 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ A+VDTNS+P VDYVIPGNDD+S+SI + V++A +G+ ++ Sbjct: 194 GIPVFAIVDTNSDPRKVDYVIPGNDDASKSIDMILGQVSAAIKEGLTQR 242 >gi|290790705|gb|ADD62963.1| ribosomal protein S2 [Oryza australiensis] Length = 249 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 20 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAAS 79 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL Sbjct: 80 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 139 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 140 MEKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 200 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 243 >gi|237719097|ref|ZP_04549578.1| 30S ribosomal protein S2 [Bacteroides sp. 2_2_4] gi|260171975|ref|ZP_05758387.1| 30S ribosomal protein S2 [Bacteroides sp. D2] gi|299148179|ref|ZP_07041241.1| ribosomal protein S2 [Bacteroides sp. 3_1_23] gi|315920286|ref|ZP_07916526.1| 30S ribosomal protein S2 [Bacteroides sp. D2] gi|229451476|gb|EEO57267.1| 30S ribosomal protein S2 [Bacteroides sp. 2_2_4] gi|298512940|gb|EFI36827.1| ribosomal protein S2 [Bacteroides sp. 3_1_23] gi|313694161|gb|EFS30996.1| 30S ribosomal protein S2 [Bacteroides sp. D2] Length = 278 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 96/246 (39%), Positives = 146/246 (59%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P VD+VIP NDD+++SI + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPSNVDFVIPANDDATKSIEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS 247 E + Sbjct: 240 EAPANK 245 >gi|290790774|gb|ADD63031.1| ribosomal protein S2 [Potamophila parviflora] Length = 249 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 20 NINLKEMIEAGVHFGHGIKKWNPKMAPYISVKRKGTHITNLARTARFLSEACDLVFDAAS 79 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 80 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 139 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M GLPD++ V+D +E +A++E L IP Sbjct: 140 MGKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTGLPDIVIVLDQQKEYIALRECAILGIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 200 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 243 >gi|160883131|ref|ZP_02064134.1| hypothetical protein BACOVA_01100 [Bacteroides ovatus ATCC 8483] gi|237714352|ref|ZP_04544833.1| 30S ribosomal protein S2 [Bacteroides sp. D1] gi|262408184|ref|ZP_06084731.1| ribosomal protein S2 [Bacteroides sp. 2_1_22] gi|293369531|ref|ZP_06616110.1| ribosomal protein S2 [Bacteroides ovatus SD CMC 3f] gi|294645476|ref|ZP_06723177.1| ribosomal protein S2 [Bacteroides ovatus SD CC 2a] gi|294806741|ref|ZP_06765568.1| ribosomal protein S2 [Bacteroides xylanisolvens SD CC 1b] gi|298480204|ref|ZP_06998402.1| ribosomal protein S2 [Bacteroides sp. D22] gi|156111356|gb|EDO13101.1| hypothetical protein BACOVA_01100 [Bacteroides ovatus ATCC 8483] gi|229445516|gb|EEO51307.1| 30S ribosomal protein S2 [Bacteroides sp. D1] gi|262353736|gb|EEZ02829.1| ribosomal protein S2 [Bacteroides sp. 2_1_22] gi|292635416|gb|EFF53929.1| ribosomal protein S2 [Bacteroides ovatus SD CMC 3f] gi|292639177|gb|EFF57494.1| ribosomal protein S2 [Bacteroides ovatus SD CC 2a] gi|294446023|gb|EFG14663.1| ribosomal protein S2 [Bacteroides xylanisolvens SD CC 1b] gi|298273485|gb|EFI15048.1| ribosomal protein S2 [Bacteroides sp. D22] Length = 278 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P VD+VIP NDD+++S+ + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPSNVDFVIPANDDATKSVEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS 247 E + Sbjct: 240 EAPANK 245 >gi|6650114|gb|AAF21725.1|AF055137_1 ribosomal protein subunit 2 [Triphysaria versicolor] Length = 202 Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGG++TNW T +QK RD E K+ Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGILTNWSTTETRLQKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|260677413|ref|YP_003208181.1| ribosomal protein S2 [Coix lacryma-jobi] gi|209361351|gb|ACI43266.1| ribosomal protein S2 [Coix lacryma-jobi] Length = 236 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 +G L V TK +A+D V AA RS + VN KW GM+TNW + + RDL E Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRSRCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MGKFHHLPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++VDTN +PD + IP NDD+ SI L + + A +G + Sbjct: 187 TISLVDTNCDPDHANISIPANDDTMTSIRLILNKLVFAISEGRS 230 >gi|195928679|gb|ACG56019.1| ribosomal protein subunit 2 [Agalinis acuta] Length = 217 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 1/217 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + Sbjct: 1 NIKLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP Sbjct: 121 TGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + ++DTN +PDL D IP NDD SI + + S Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNKLVS 217 >gi|195928675|gb|ACG56017.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928685|gb|ACG56022.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928803|gb|ACG56081.1| ribosomal protein subunit 2 [Agalinis tenella] Length = 217 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + Sbjct: 1 NIKLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP Sbjct: 121 TGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD SI + + Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNKLV 216 >gi|6650144|gb|AAF21740.1|AF055152_1 ribosomal protein subunit 2 [Schlegelia parviflora] Length = 202 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|2734677|gb|AAB93690.1| ribosomal protein subunit 2 [Ligustrum japonicum] Length = 204 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFYAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K +A+D V AA ++ + VN KWLGGM+TNW T + K RDL E K+ Sbjct: 61 KKKAADSVAWAAIKARCHYVNKKWLGGMLTNWSTTETRVHKFRDLRIEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYVGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD++ SI L + Sbjct: 181 PDLADISIPANDDATSSIRLILNK 204 >gi|2734687|gb|AAB93695.1| ribosomal protein subunit 2 [Parentucellia viscosa] Length = 204 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 120/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGTLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ SI L + Sbjct: 181 PNLADISIPANDDAISSIRLILNK 204 >gi|194246627|ref|YP_002004266.1| 30S ribosomal protein S2 [Candidatus Phytoplasma mali] gi|193806984|emb|CAP18419.1| 30S ribosomal protein S2 [Candidatus Phytoplasma mali] Length = 244 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 144/225 (64%), Gaps = 2/225 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA TI+QLLESG+ FGH WNPKM++YIF RN HIIDL +TV ++KA Q + Sbjct: 1 MA-AVVTIKQLLESGIHFGHITRKWNPKMKQYIFTSRNGIHIIDLKKTVEKIEKAYQELQ 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 A GG+ILF+ATK Q + + E A+ + QY V +WLGG TN+KT++Q I L Sbjct: 60 KIAATGGKILFLATKKQIKNIIKEEAQDAQQYYVIQRWLGGTFTNFKTITQRINLLHQLY 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + + KKE + +KR+KL++ L GI++M LP +F+VD +E +A+ EA + Sbjct: 120 KQEKDGLWKKLPKKEVSKLMQKREKLEKFLGGIKNMKTLPQAIFIVDPQKEIIAVYEAAK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 L I I +VDTN +PDLVDY+IP NDD+ R + L ++A A + Sbjct: 180 LGIKIFGIVDTNCDPDLVDYIIPANDDAIRGVKLITSIIAKAMKE 224 >gi|161579026|ref|NP_869529.2| 30S ribosomal protein S2 [Rhodopirellula baltica SH 1] gi|115305706|sp|Q7UKH4|RS2_RHOBA RecName: Full=30S ribosomal protein S2 Length = 260 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 144/229 (62%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++++E+GV FGHR LWNPKM YIF ++N HI+D+ +T+ L +A + +S Sbjct: 1 MANEIVKEMIEAGVHFGHRTSLWNPKMAPYIFGKKNQIHILDIRETLRGLLRAKKYLSQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G ILFV TK QA + V E + R V+ +WLGG +TN++T+ + +L +LE L Sbjct: 61 AAGGSLILFVGTKRQAGEAVEEQSLRCGMPFVSERWLGGTLTNFRTIRSRLGRLEELEAL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + ++KK + ++ R+ K+ R L+G+R M LP++MF+VD +E+ A++EA+RL Sbjct: 121 RAGDGINDYSKKMQSSLNREYRKMYRNLNGLRTMNRLPEVMFIVDPGKERNAVREAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 I VA++DT+S+P +D IPGNDD RS+ + +A A I G + Sbjct: 181 ITTVALIDTDSDPSQIDLPIPGNDDGIRSVEMIMRELADAVIAGKGQTQ 229 >gi|6650142|gb|AAF21739.1|AF055151_1 ribosomal protein subunit 2 [Lindenbergia philippensis] Length = 202 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|189095356|ref|YP_001936369.1| ribosomal protein S2 [Heterosigma akashiwo] gi|157694699|gb|ABV65975.1| 30S ribosomal protein S2 [Heterosigma akashiwo] gi|157777930|gb|ABV70116.1| 30S ribosomal protein S2 [Heterosigma akashiwo] Length = 234 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 97/229 (42%), Positives = 149/229 (65%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ QLLE+GV +GH+++ WNPKM YI+ ER+ HIIDL QT+ +L++A +++ Sbjct: 1 MANLSLAQLLEAGVHYGHKSYRWNPKMFPYIYNERDGIHIIDLVQTIHLLKQACDFVNEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G LFV TK QA+ + + AKR+ Y VN +WLGGM+TN T S IQ+L+ LE + Sbjct: 61 ASEGKTFLFVGTKRQAAAIIAQEAKRANSYYVNHRWLGGMLTNSNTFSTRIQRLKFLESQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE ++++ +KL++ L G+++M PD++ VVD RE AI+EA +L+ Sbjct: 121 EASGYFEKLTKKESALLKKELEKLRKYLSGVKEMIKRPDIIIVVDQKREMNAIKEALKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IPI++++DTN +PDLVD IPGNDD+ RSI +A G + Sbjct: 181 IPIISILDTNCDPDLVDIPIPGNDDALRSIKFIIQKLADQICLGQRNKK 229 >gi|11466780|ref|NP_039376.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|132444674|ref|YP_654209.2| ribosomal protein S2 [Oryza sativa Indica Group] gi|148840854|sp|P0C480|RR2_ORYSA RecName: Full=30S ribosomal protein S2, chloroplastic gi|148840857|sp|P0C481|RR2_ORYSI RecName: Full=30S ribosomal protein S2, chloroplastic gi|148840858|sp|P0C482|RR2_ORYSJ RecName: Full=30S ribosomal protein S2, chloroplastic gi|20143582|gb|AAM12339.1|AC091680_40 ribosomal protein S2 [Oryza sativa Japonica Group] gi|20146743|gb|AAM12479.1|AC074232_6 ribosomal protein S2 [Oryza sativa Japonica Group] gi|11974|emb|CAA33989.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|46805109|dbj|BAD17348.1| rice chloroplast ribosomal protein S2 [Oryza sativa Japonica Group] gi|226692|prf||1603356T ribosomal protein S2 Length = 236 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MEKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|10179752|gb|AAG13868.1| ribosomal protein subunit 2 [Zaluzianskya katharinae] Length = 202 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A +I D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTAXFLSEACDLIFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLFRLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|19920161|gb|AAM08593.1|AC092750_27 Putative ribosomal protein S2 from chromosome 10 chloroplast insertion [Oryza sativa Japonica Group] gi|21327353|gb|AAM48258.1|AC122148_11 Putative ribosomal protein S2 from chromosome 10 chloroplast insertion [Oryza sativa Japonica Group] Length = 236 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLTAEEK 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MEKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|29349285|ref|NP_812788.1| 30S ribosomal protein S2 [Bacteroides thetaiotaomicron VPI-5482] gi|253570368|ref|ZP_04847777.1| 30S ribosomal protein S2 [Bacteroides sp. 1_1_6] gi|298384823|ref|ZP_06994382.1| ribosomal protein S2 [Bacteroides sp. 1_1_14] gi|61215766|sp|Q8A0Z4|RS2_BACTN RecName: Full=30S ribosomal protein S2 gi|29341193|gb|AAO78982.1| 30S ribosomal protein S2 (BS1) [Bacteroides thetaiotaomicron VPI-5482] gi|251840749|gb|EES68831.1| 30S ribosomal protein S2 [Bacteroides sp. 1_1_6] gi|298261967|gb|EFI04832.1| ribosomal protein S2 [Bacteroides sp. 1_1_14] Length = 278 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P VD+VIP NDD+++S+ + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNVDFVIPANDDATKSVEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS 247 E + Sbjct: 240 EAPANK 245 >gi|281423318|ref|ZP_06254231.1| ribosomal protein S2 [Prevotella oris F0302] gi|281402654|gb|EFB33485.1| ribosomal protein S2 [Prevotella oris F0302] Length = 290 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 140/228 (61%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A +V+ Sbjct: 19 MSRTNFDQLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEVLKAI 78 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA D V + A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 79 AKSGKKILFVATKKQAKDIVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 138 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L + R+R KL++ L I D+ LP +FV+D +E +A++EA RL Sbjct: 139 MNDGTFSNLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEANRLG 198 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ +VDTNS+P +D+VIP NDD+ S+ V SA +G+ + Sbjct: 199 IPVFGIVDTNSDPKNIDFVIPANDDAKDSVETILTAVCSAIAEGLEER 246 >gi|56784289|dbj|BAD81971.1| Chloroplast ribosomal protein S2 [Oryza sativa Japonica Group] Length = 236 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 81/224 (36%), Positives = 128/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RD E Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRTEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++ K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MEKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|195928707|gb|ACG56033.1| ribosomal protein subunit 2 [Agalinis divaricata] Length = 220 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 3/220 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+ V GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NINLEEMLEARVHLGHGTRKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + L V TK + A+D V AA ++ +CVN KWLGGM+TNW +QK R+L Sbjct: 61 GGKQFLIVGTKKKNMATDLVAWAALKARCHCVNKKWLGGMLTNWSITETRLQKFRNLRMK 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ ++R+ +L+ L GI+ M GLPD++ +VD ++E A++E L Sbjct: 121 QKTGRLNRLPKRDAAVVKRQLSRLQTYLGGIQYMTGLPDIVIIVDQHKEYRALRECITLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 IP + ++DTN +PDL D IP NDD SI L + + A Sbjct: 181 IPTICLIDTNCDPDLADIPIPANDDGIFSIRLILNKLVFA 220 >gi|195928669|gb|ACG56014.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928671|gb|ACG56015.1| ribosomal protein subunit 2 [Agalinis acuta] gi|195928677|gb|ACG56018.1| ribosomal protein subunit 2 [Agalinis acuta] Length = 216 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ + Sbjct: 1 NIKLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGRHITNLTRTARFLSEICDLVCYAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T+ A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 GGKQFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E A+QE L IP Sbjct: 121 TGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYTALQECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD SI + + Sbjct: 181 TICLIDTNCDPDLADISIPANDDGRSSIRFILNKLV 216 >gi|10179756|gb|AAG13870.1| ribosomal protein subunit 2 [Stachytarpheta dichotoma] Length = 202 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++ +D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKVADSVARAATKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|255536095|ref|YP_003096466.1| SSU ribosomal protein S2p (SAe) [Flavobacteriaceae bacterium 3519-10] gi|255342291|gb|ACU08404.1| SSU ribosomal protein S2p (SAe) [Flavobacteriaceae bacterium 3519-10] Length = 258 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 95/260 (36%), Positives = 158/260 (60%), Gaps = 3/260 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + ++ LLE+GV FGH WNP M YIF E+N HI+DL +T L +A + Sbjct: 1 MAKANVKDLLEAGVHFGHMTRKWNPNMAPYIFMEKNGIHIVDLHKTAVKLDEACTALEKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFVATK QA + V + A + +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 TSAGKKVLFVATKKQAKEVVAKYAADLNMPYITERWPGGMLTNFVTIRKAVKKMNQIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +KKERL ++R+R L++ L I DM LP +FVVD +E +AI EA++L Sbjct: 121 KKDGTFETLSKKERLQVDRQRANLEKNLGSISDMVRLPSAIFVVDIMKEHIAITEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI A+VDTNS+P VDYVIPGNDD+S+SI + +V+++ DG++++ + + Sbjct: 181 IPIFAIVDTNSDPRKVDYVIPGNDDASKSIDMLLSIVSASIKDGLSQRKADKEKSKEEG- 239 Query: 242 ETVVHSKEGMQLEEDSQSSE 261 V + + ++ ++E Sbjct: 240 -EKVSADADTDFDTEATAAE 258 >gi|42795482|gb|AAS46049.1| ribosomal protein S2 [Oryza sativa Indica Group] gi|42795548|gb|AAS46114.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|42795612|gb|AAS46177.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|290790567|gb|ADD62827.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|290790636|gb|ADD62895.1| ribosomal protein S2 [Oryza meridionalis] Length = 249 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 20 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAAS 79 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL Sbjct: 80 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 139 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E K++ ++RK L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 140 MEKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 199 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 200 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 243 >gi|332878073|ref|ZP_08445803.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684035|gb|EGJ56902.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 272 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 96/243 (39%), Positives = 147/243 (60%), Gaps = 2/243 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDDAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA V E A V +W GGM+TN+ T+ ++++K+ ++++L Sbjct: 61 AKSGKKILFVATKKQAKQVVAEKAAAVNMPYVIERWPGGMLTNFPTIRKAVKKMANIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL++ L I D+ LP +FVVD +E++A++EA RL Sbjct: 121 TADGTYSNLSKREILQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKEQIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNSNPD +D+VIP NDD+++S+ + + +A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSNPDNIDFVIPANDDANKSVEVILEACCAAIAEGLEERKAEK-VDVEAAG 239 Query: 242 ETV 244 E Sbjct: 240 EAE 242 >gi|254486229|ref|ZP_05099434.1| ribosomal protein S2 [Roseobacter sp. GAI101] gi|214043098|gb|EEB83736.1| ribosomal protein S2 [Roseobacter sp. GAI101] Length = 261 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 125/251 (49%), Positives = 173/251 (68%), Gaps = 1/251 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI+ RN HI+DL+QTVPML +ALQVI DTVA+GG ILFV TK QA+ + +AA++ Sbjct: 1 MGPYIYGARNGIHIMDLTQTVPMLDQALQVIRDTVAKGGSILFVGTKRQAAQPIADAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E + G TKKERL +ER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKSIDEQSERGFAGLTKKERLGMERDQFKLEAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG PDL+FV+D +E LA+ EA +L IP+VAVVDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGRPDLIFVIDVKKEALAVAEANKLGIPVVAVVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSK-EGMQLEEDSQSSESSVLDG 267 R+I+L+CDL A AA+DG++ Q G D + E +E + S+E+ D Sbjct: 181 RAISLYCDLAARAALDGMSAQLGAAGVDIGAMEEAPEEEALIDGGVEVGAASTETVSNDA 240 Query: 268 QEVAVVPELMS 278 +L S Sbjct: 241 MSADAPLDLES 251 >gi|288801702|ref|ZP_06407144.1| ribosomal protein S2 [Prevotella melaninogenica D18] gi|288335744|gb|EFC74177.1| ribosomal protein S2 [Prevotella melaninogenica D18] Length = 271 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 12/271 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDQLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKEVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MNDGTFSNLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA- 240 IP+ +VDTNS+P +DY+IP NDD+ S+ A +G+ + + + +A Sbjct: 181 IPVFGIVDTNSDPKNIDYIIPANDDAKDSVETILAACCGAIAEGLEERKAEKADEKAAAE 240 Query: 241 ----------GETVVHSKEGMQLEEDSQSSE 261 ++E + E ++ ++E Sbjct: 241 QAEEAAEAKPKRAARKAEEAPKAENEAPAAE 271 >gi|303236832|ref|ZP_07323411.1| ribosomal protein S2 [Prevotella disiens FB035-09AN] gi|302483000|gb|EFL46016.1| ribosomal protein S2 [Prevotella disiens FB035-09AN] Length = 267 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 140/228 (61%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH + WNP M+ YI+ ERN HIIDL +TV + +A +V+ Sbjct: 1 MSRTNFDQLLQAGCHFGHLHRKWNPAMKPYIYMERNGIHIIDLHKTVAKIDEAAEVLKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK Q+ D V E A VN +W GGM+TN+ T+ ++I+K+ +++ Sbjct: 61 AKSGKKILFVATKKQSKDVVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAIKKMTNIDRL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 MNDGTFSNLSKREILQISRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ +VDTNS+P +DYVIP NDD+ S+ + +A +G+ + Sbjct: 181 IPVFGIVDTNSDPKNIDYVIPANDDAKDSVEVILGACCAAIAEGLEER 228 >gi|89898766|ref|YP_515876.1| 30S ribosomal protein S2 [Chlamydophila felis Fe/C-56] gi|123749519|sp|Q252Q7|RS2_CHLFF RecName: Full=30S ribosomal protein S2 gi|89332138|dbj|BAE81731.1| 30S ribosomal protein S2 [Chlamydophila felis Fe/C-56] Length = 273 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 97/264 (36%), Positives = 158/264 (59%), Gaps = 4/264 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+KAL + Sbjct: 4 SLCNLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRKALPQVCK 63 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 64 VIKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEK 123 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + + TKKE + ++ KL + L+GIR + P L+ VVD EK+A+ EA++L Sbjct: 124 DLTQNSSYLTKKEIALLAKRHQKLLKNLEGIRYLRKTPGLVIVVDPGYEKIAVAEAKKLG 183 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP++A+VDTN +P +D+VIP NDDS +SI L + A ++ + +G + S Sbjct: 184 IPVLALVDTNCDPTPIDHVIPCNDDSLKSIRLIISAIKDAIVNTKKK----LGVEIVSPI 239 Query: 242 ETVVHSKEGMQLEEDSQSSESSVL 265 + + +E E++++ + +L Sbjct: 240 KALTSDEEANSSAEENENRQEDLL 263 >gi|224025127|ref|ZP_03643493.1| hypothetical protein BACCOPRO_01861 [Bacteroides coprophilus DSM 18228] gi|224018363|gb|EEF76361.1| hypothetical protein BACCOPRO_01861 [Bacteroides coprophilus DSM 18228] Length = 279 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 151/262 (57%), Gaps = 2/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRVNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVVKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL++ L I ++ LP +FVVD +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREILQISRQRAKLEKNLGSIAELTRLPSALFVVDVLKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P VD+VIP NDD+++S+ + D +A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSDPTNVDFVIPANDDATKSVEVILDACCAAMAEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 E + + + +E Sbjct: 240 ENAPKAGKKKATKARMDKAEED 261 >gi|299142497|ref|ZP_07035628.1| ribosomal protein S2 [Prevotella oris C735] gi|298575932|gb|EFI47807.1| ribosomal protein S2 [Prevotella oris C735] Length = 290 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 89/228 (39%), Positives = 139/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 19 MSRTNFDQLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKAI 78 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA D V + A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 79 AKSGKKILFVATKKQAKDIVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 138 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L + R+R KL++ L I D+ LP +FV+D +E +A++EA RL Sbjct: 139 MNDGTFSNLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEANRLG 198 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ +VDTNS+P +D+VIP NDD+ S+ V SA +G+ + Sbjct: 199 IPVFGIVDTNSDPKNIDFVIPANDDAKDSVETILTAVCSAIAEGLEER 246 >gi|15618606|ref|NP_224892.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae CWL029] gi|15836228|ref|NP_300752.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae J138] gi|16752344|ref|NP_444602.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae AR39] gi|33242054|ref|NP_876995.1| 30S ribosomal protein S2 [Chlamydophila pneumoniae TW-183] gi|6707743|sp|Q9Z7K9|RS2_CHLPN RecName: Full=30S ribosomal protein S2 gi|4376999|gb|AAD18835.1| S2 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|7188989|gb|AAF37943.1| ribosomal protein S2 [Chlamydophila pneumoniae AR39] gi|8979068|dbj|BAA98903.1| S2 ribosomal protein [Chlamydophila pneumoniae J138] gi|33236564|gb|AAP98652.1| ribosomal protein S2 [Chlamydophila pneumoniae TW-183] Length = 277 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 99/262 (37%), Positives = 157/262 (59%), Gaps = 1/262 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI+ L+ +G FGH+ WNPKM+ YIF E+N +II+L++T+ L+ AL I + Sbjct: 7 KLTIKDLMSAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLQQLRNALPHIRKVIQ 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +LFV TK QA + EAA + ++ + +WLGGM+TN T+ SI+ L +E+ L+ Sbjct: 67 DNKTVLFVGTKKQAKCVIREAAIEAGEFFIAERWLGGMLTNMTTIRNSIKTLDKIEKDLS 126 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE + ++ KL R L+GIR M P L+ VVD + EK+A+ EA++L IP+ Sbjct: 127 RNQAYLTKKEAALLAKRHQKLLRNLEGIRYMKKAPGLLVVVDPSYEKIAVAEAKKLGIPV 186 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +D+VIP NDDS +SI L +++ I+ + + + KS Sbjct: 187 LALVDTNCDPTPIDHVIPCNDDSLKSIRLIINVIKENIIEAKHKLGIEIVSPVKSLEVPD 246 Query: 245 VHSKEGMQLEE-DSQSSESSVL 265 + + E Q +E D ++ E +L Sbjct: 247 LSAFESSQDDESDEENREEDLL 268 >gi|6650138|gb|AAF21737.1|AF055149_1 ribosomal protein subunit 2 [Pedicularis attollens] Length = 202 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 120/202 (59%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLVVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E + K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGRLKRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPSNDDAISSIRLIL 202 >gi|255011773|ref|ZP_05283899.1| 30S ribosomal protein S2 [Bacteroides fragilis 3_1_12] gi|313149610|ref|ZP_07811803.1| 30S ribosomal protein S2 [Bacteroides fragilis 3_1_12] gi|313138377|gb|EFR55737.1| 30S ribosomal protein S2 [Bacteroides fragilis 3_1_12] Length = 278 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 98/277 (35%), Positives = 156/277 (56%), Gaps = 3/277 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTTIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TADGTYSNLSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS-KEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + K+ +S E ++ + A + E Sbjct: 240 EAPANKGKKKSAKARLDKSDEEAINAAKAAAFLKEDE 276 >gi|10179742|gb|AAG13863.1| ribosomal protein subunit 2 [Sesamum indicum] Length = 202 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++ +D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKVADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|6650148|gb|AAF21742.1|AF055154_1 ribosomal protein subunit 2 [Mimulus aurantiacus] Length = 202 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RDL K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTXRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|283778742|ref|YP_003369497.1| 30S ribosomal protein S2 [Pirellula staleyi DSM 6068] gi|283437195|gb|ADB15637.1| ribosomal protein S2 [Pirellula staleyi DSM 6068] Length = 256 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 136/228 (59%), Gaps = 1/228 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +L+E+GV FGHR WNPKM YI+ +N HI+D+ +TV L +A + ++ A+G Sbjct: 7 VAELVEAGVHFGHRASRWNPKMAPYIYARKNGIHIVDIRETVRGLLRAKKYLAQVAAQGS 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV TK QA + A R V +WLGG +TN++T+ + +L ++E++ E Sbjct: 67 LILFVGTKKQAGPAIEREALRCHMPFVAERWLGGTLTNFRTIRSRLGRLEEVEKVRGGEE 126 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK + + R+ K+ R L+GIR + LP+ + + D N+EK AI+EAR L I VA Sbjct: 127 LATYSKKAQSALAREYRKMYRNLNGIRTLNRLPECLVIFDPNKEKNAIKEARSLGIKTVA 186 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 ++DT+ +PD VD IPGNDD RS+ L +A A + G S G Sbjct: 187 LIDTDCDPDTVDLPIPGNDDGIRSVELIARHLAEAILVGAQSAASRKG 234 >gi|330996046|ref|ZP_08319940.1| ribosomal protein S2 [Paraprevotella xylaniphila YIT 11841] gi|329574043|gb|EGG55621.1| ribosomal protein S2 [Paraprevotella xylaniphila YIT 11841] Length = 272 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 97/258 (37%), Positives = 151/258 (58%), Gaps = 2/258 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDDAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA V E A V +W GGM+TN+ T+ ++++K+ ++++L Sbjct: 61 AKSGKKILFVATKKQAKQVVAEKAAAVNMPYVIERWPGGMLTNFPTIRKAVKKMANIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL++ L I D+ LP +FVVD +E++A++EA RL Sbjct: 121 TADGTYSNLSKREILQISRQRAKLEKNLGSIADLTRLPSALFVVDVLKEQIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNSNPD +D+VIP NDD+++S+ + + +A +G+ + + D ++AG Sbjct: 181 IPVFAIVDTNSNPDNIDFVIPANDDANKSVEVILEACCAAIAEGLEERKAEK-VDAEAAG 239 Query: 242 ETVVHSKEGMQLEEDSQS 259 E ++ +S Sbjct: 240 EAENKPRKRTAKARVEKS 257 >gi|323343333|ref|ZP_08083560.1| 30S ribosomal protein S2 [Prevotella oralis ATCC 33269] gi|323095152|gb|EFZ37726.1| 30S ribosomal protein S2 [Prevotella oralis ATCC 33269] Length = 293 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 99/284 (34%), Positives = 157/284 (55%), Gaps = 10/284 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDQLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA D V + A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKDIVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MSDGTFANLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVMKEAIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P+ VD+VIP NDD+ S+ A +G+ + AD K+A Sbjct: 181 IPVFAMVDTNSDPNNVDFVIPANDDAKDSVDAILTACCQAIAEGLEERKVEK-ADEKAAS 239 Query: 242 ETVVH--------SKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E +++ + +ED+ +E+ E + Sbjct: 240 EQAEEVADTKSKRARKARKDKEDAPETEAKTEVKAEDEAEVKTE 283 >gi|153809097|ref|ZP_01961765.1| hypothetical protein BACCAC_03407 [Bacteroides caccae ATCC 43185] gi|149128430|gb|EDM19649.1| hypothetical protein BACCAC_03407 [Bacteroides caccae ATCC 43185] Length = 278 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 100/277 (36%), Positives = 157/277 (56%), Gaps = 3/277 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P VD+VIP NDD+++S+ + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPSNVDFVIPANDDATKSVEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS-KEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + K+ +S E ++ + A + E Sbjct: 240 EAPANKGKKKSAKARLDKSDEEAINAAKAAAFLKEDE 276 >gi|209573697|sp|A5CE04|RS2_ORITB RecName: Full=30S ribosomal protein S2 Length = 291 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 110/241 (45%), Positives = 159/241 (65%), Gaps = 4/241 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI-S 60 L TI +LL++G+ +GH+ WNPKM YI+ +R++ HII+L TV + +VI Sbjct: 8 TLSSVTISELLDAGIHYGHKASRWNPKMAPYIYGKRDDVHIINLDYTVSQIDVISKVIYK 67 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + GRILFV T+ D V + A+ QY V +WLGGM+TNW TVS++I KL LE Sbjct: 68 EIKEKNGRILFVDTRR-HRDIVAQYAENCGQYYVTHRWLGGMLTNWVTVSKAINKLDQLE 126 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + L + G+TK+E L+++R RD L R+ GIR+MGG P L+ V+D N++ +A++EAR Sbjct: 127 KKLADPEKIVGYTKREILSMQRMRDNLHRSFGGIRNMGGKPTLLIVMDINKDHIAVKEAR 186 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 R +IPI+A+VDTNS+PDLVDY IPGNDD+ RSI L+C + + A + I + G D Sbjct: 187 REKIPIIAIVDTNSDPDLVDYPIPGNDDAIRSIRLYCKIFSDAVLLAIEHMLAASGVDLG 246 Query: 239 S 239 + Sbjct: 247 A 247 >gi|307564998|ref|ZP_07627515.1| 30S ribosomal protein S2 [Prevotella amnii CRIS 21A-A] gi|307346311|gb|EFN91631.1| 30S ribosomal protein S2 [Prevotella amnii CRIS 21A-A] Length = 266 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 91/266 (34%), Positives = 150/266 (56%), Gaps = 1/266 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDQLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK Q+ + V + A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQSKEVVADKAASVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 MNDGTFSNLSKRELLQISRQRAKLEKNLGSISDLTRLPAALFVIDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNS+P +DYVIP NDD+ S+ + SA +G+ + + + +A Sbjct: 181 IPVFAIVDTNSDPKNIDYVIPANDDAKDSVDVILTACCSAIAEGLEERKAEKADEKAAAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG 267 + + ++ + E + Sbjct: 241 QAELAAEAKPKRAARKTKEEEAPAAE 266 >gi|163786580|ref|ZP_02181028.1| 30S ribosomal protein S2 [Flavobacteriales bacterium ALC-1] gi|159878440|gb|EDP72496.1| 30S ribosomal protein S2 [Flavobacteriales bacterium ALC-1] Length = 266 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 101/239 (42%), Positives = 148/239 (61%), Gaps = 1/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +++LLE+GV FGH WNP M YI+ ERN HII+L +T +Q+ + ++ Sbjct: 1 MEKVEVKELLEAGVHFGHLTRKWNPNMAPYIYMERNGIHIINLYKTAAKIQETSEALAKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A G +ILFVATK QA D V E A Q + +W GGM+TN+ T+ ++++K+ ++ + Sbjct: 61 AASGKKILFVATKKQAKDIVAEKAGAVNQPYITERWPGGMLTNFVTIRKAVKKMASIDRM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKERL + R R KL++ L I DM LP +FVVD RE +AI+EA++L Sbjct: 121 KKDGTFNSLSKKERLQVNRLRAKLEKNLGSISDMTRLPGALFVVDIMREHIAIKEAQKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI A+VDTNS+P VDYVIP NDD+S+SI +V+SA DG+ + + A Sbjct: 181 IPIFAMVDTNSDPRQVDYVIPANDDASKSIQKVLSIVSSAIEDGLNERKAERAEKDGKA 239 >gi|269302483|gb|ACZ32583.1| ribosomal protein S2 [Chlamydophila pneumoniae LPCoLN] Length = 277 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 99/262 (37%), Positives = 157/262 (59%), Gaps = 1/262 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI+ L+ +G FGH+ W+PKM+ YIF E+N +II+L++T+ L+ AL I + Sbjct: 7 KLTIKDLMSAGAHFGHQTRRWHPKMKLYIFEEKNGLYIINLAKTLQQLRNALPHIRKVIQ 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +LFV TK QA + EAA + ++ V +WLGGM+TN T+ SI+ L +E+ L+ Sbjct: 67 DNKTVLFVGTKKQAKCVIREAAIEAGEFFVAERWLGGMLTNMTTIRNSIKTLDKIEKDLS 126 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + TKKE + ++ KL R L+GIR M P L+ VVD + EK+A+ EA++L IP+ Sbjct: 127 RNQAYLTKKEAALLAKRHQKLLRNLEGIRYMKKAPGLLVVVDPSYEKIAVAEAKKLGIPV 186 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDTN +P +D+VIP NDDS +SI L +++ I+ + + + KS Sbjct: 187 LALVDTNCDPTPIDHVIPCNDDSLKSIRLIINVIKENIIEAKHKLGIEIVSPVKSLEVPD 246 Query: 245 VHSKEGMQLEE-DSQSSESSVL 265 + + E Q +E D ++ E +L Sbjct: 247 LSAFESSQDDESDEENREEDLL 268 >gi|10179740|gb|AAG13862.1| ribosomal protein subunit 2 [Proboscidea louisianica] Length = 202 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M G+PD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLSRLQTYLGGIKYMTGVPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PD+ D IP NDD+ SI L Sbjct: 181 PDVADISIPANDDAISSIRLIL 202 >gi|6650124|gb|AAF21730.1|AF055142_1 ribosomal protein subunit 2 [Harveya capensis] Length = 202 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASGGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E TK+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKAGRLNRLTKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|187735180|ref|YP_001877292.1| ribosomal protein S2 [Akkermansia muciniphila ATCC BAA-835] gi|187425232|gb|ACD04511.1| ribosomal protein S2 [Akkermansia muciniphila ATCC BAA-835] Length = 231 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 96/231 (41%), Positives = 142/231 (61%), Gaps = 1/231 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I Q++E+GV GH+ W+P M++Y+ ++ HII+L +T L KA ++D Sbjct: 1 MINDLINQMVEAGVHLGHQTRKWHPSMKKYLLKDKAGIHIINLEETEKCLDKACSFLADL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 R +ILFV K QA + V EAA+ + QY VN +WLGGM+TN T+ +SI++L LE + Sbjct: 61 ARRNKKILFVGCKRQAQEAVREAAEATGQYYVNHRWLGGMLTNMSTIRKSIERLVYLEGI 120 Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 E + +KKE ++R+R KL+R L GIR+MGG PD M + + E +AI+EA RL Sbjct: 121 EKSPEFKSMSKKELAALDRERQKLERNLQGIRNMGGAPDAMVAIGADHEDIAIREAHRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 IP+ +VDTN++P +D+ IPGNDD+ RSI L D + A +G Sbjct: 181 IPVCVLVDTNADPKEIDFPIPGNDDAVRSIRLILDCIVKAINEGKGASAEA 231 >gi|149196189|ref|ZP_01873244.1| ribosomal protein S2 [Lentisphaera araneosa HTCC2155] gi|149140450|gb|EDM28848.1| ribosomal protein S2 [Lentisphaera araneosa HTCC2155] Length = 345 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 95/223 (42%), Positives = 141/223 (63%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 I LLE+GV FGH+ WNPKM+ YI+ RN HI DLS+T+ L A + + TVA Sbjct: 2 SIKITDLLEAGVHFGHQTRRWNPKMKPYIYGSRNGIHIFDLSKTMVALNNACKFLYSTVA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG +LF+ TK Q+ + V EAAK S + ++ +WLGG +TN T+ +S+ KL+ ++ Sbjct: 62 DGGDVLFIGTKRQSQEIVEEAAKASNMHYISYRWLGGTLTNLTTIRKSVAKLKKYTKMEE 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KK I R++ KL+ +L GI D+ P ++ +VD N+E +AI+EA+ L IP Sbjct: 122 DGTLDAMKKKAASQIRREKTKLENSLSGIVDLQKPPAVVVIVDINKEHIAIKEAQSLGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +VA++D+NSNPD V Y IPGNDD+ RS+ + D +++A + G Sbjct: 182 VVAILDSNSNPDTVAYGIPGNDDAVRSVQVIFDQLSAAVVAGK 224 >gi|288800290|ref|ZP_06405748.1| ribosomal protein S2 [Prevotella sp. oral taxon 299 str. F0039] gi|288332503|gb|EFC70983.1| ribosomal protein S2 [Prevotella sp. oral taxon 299 str. F0039] Length = 273 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 94/229 (41%), Positives = 140/229 (61%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + Sbjct: 1 MSRTNFDQLLQAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKVDEAADALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA + V E A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKEIVAEKASSVNMPYVVERWPGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FV+D +E +AI+EA+RL Sbjct: 121 MNDGTFSNLSKRELLQITRQRAKLEKNLGSISDLTRLPSALFVIDVMKEHIAIKEAQRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+ A+VDTNS+P LVDYVIP NDD+ SI + SA +G+ + Sbjct: 181 IPVFAIVDTNSDPRLVDYVIPANDDAKDSIDVILTACCSAIAEGLTERK 229 >gi|228472825|ref|ZP_04057583.1| ribosomal protein S2 [Capnocytophaga gingivalis ATCC 33624] gi|228275876|gb|EEK14642.1| ribosomal protein S2 [Capnocytophaga gingivalis ATCC 33624] Length = 241 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 103/242 (42%), Positives = 148/242 (61%), Gaps = 3/242 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++ LLE+GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NSIEVKDLLEAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGKKILFVATKKQAKDIVAEKATSVGMPYITERWPGGMLTNFVTIRKAVKKMSSID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +KKE+L+I R R+KL++ L I DM LP +FVVDT RE +A++EA++ Sbjct: 120 KMKKDGTYDTLSKKEKLHITRLREKLEKNLGSIADMTRLPAALFVVDTLREHIAVKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VDYVIP NDD+SRSI V A +G+ AD K Sbjct: 180 LNIPIFAMVDTNSDPREVDYVIPANDDASRSIEKILSYVVEAIKEGL-EDKKVEKADEKP 238 Query: 240 AG 241 A Sbjct: 239 AE 240 >gi|53715295|ref|YP_101287.1| 30S ribosomal protein S2 [Bacteroides fragilis YCH46] gi|60683230|ref|YP_213374.1| 30S ribosomal protein S2 [Bacteroides fragilis NCTC 9343] gi|265767782|ref|ZP_06095314.1| ribosomal protein S2 [Bacteroides sp. 2_1_16] gi|61215471|sp|Q64P29|RS2_BACFR RecName: Full=30S ribosomal protein S2 gi|81313718|sp|Q5L8W7|RS2_BACFN RecName: Full=30S ribosomal protein S2 gi|52218160|dbj|BAD50753.1| 30S ribosomal protein S2 (BS1) [Bacteroides fragilis YCH46] gi|60494664|emb|CAH09465.1| putative 30S ribosomal protein S2 [Bacteroides fragilis NCTC 9343] gi|263252454|gb|EEZ23982.1| ribosomal protein S2 [Bacteroides sp. 2_1_16] gi|301164749|emb|CBW24308.1| putative 30S ribosomal protein S2 [Bacteroides fragilis 638R] Length = 278 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 98/277 (35%), Positives = 156/277 (56%), Gaps = 3/277 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTTIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TADGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS-KEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + K+ +S E ++ + A + E Sbjct: 240 EAPANKGKKKSAKARLDKSDEEAINAAKAAAFLKEDE 276 >gi|2734665|gb|AAB93685.1| ribosomal protein subunit 2 [Euphrasia sp.] Length = 204 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ SI L + Sbjct: 181 PNLADISIPANDDAISSIRLILNK 204 >gi|126663059|ref|ZP_01734057.1| 30S ribosomal protein S2 [Flavobacteria bacterium BAL38] gi|126624717|gb|EAZ95407.1| 30S ribosomal protein S2 [Flavobacteria bacterium BAL38] Length = 253 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 99/263 (37%), Positives = 158/263 (60%), Gaps = 11/263 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + +++LLE+GV FGH W+P M YI+ ERN HII+L +T +++A + + Sbjct: 1 MA-NKIDVKELLEAGVHFGHMTRKWDPNMAPYIYMERNGIHIINLYKTAAKIEEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKVLFVATKKQAKDIVAEKAAACNMPYITERWPGGMLTNFVTIRKAVKKMASID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I DM LP +FVVD E +AI+EA++ Sbjct: 120 RMKKDGTFMTLSKKERLQVDRLRAKLEKNLGSIADMSRLPAALFVVDVKAEHIAIKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+P +D+VIP NDD+S+SI LV++A I+G++ + Sbjct: 180 LNIPVFAMVDTNSDPRPIDFVIPANDDASKSIDKVLSLVSAALIEGLSDRK--------- 230 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 + + +KE E + +E+ Sbjct: 231 VEKDELPAKEVEATEAPATETEA 253 >gi|110004591|emb|CAK98928.1| 30s ribosomal protein s2 [Spiroplasma citri] Length = 359 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 150/221 (67%), Gaps = 2/221 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + T L E+G QFGH+ WNPKM+ YI+ E+N HIIDL QT+ L+ ++++ Sbjct: 1 MA-KELTREMLWEAGAQFGHQTKRWNPKMKPYIYGEKNKIHIIDLQQTLWRLEDVKKLMA 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + AR G+ILFV TK QA V +AA+R + VN +WLGG +TN KT+ +++L ++E Sbjct: 60 NIAARKGKILFVGTKKQAKWIVKDAAERCECFYVNQRWLGGTLTNLKTIHLRVKRLWNIE 119 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 N E + KKE++ I++++DKL++ L GI+ M LP +FVVD E +A++EAR+ Sbjct: 120 RQEKNGELKLLPKKEQMLIKKEKDKLEKFLGGIKGMKELPQALFVVDPKEEHIAVREARK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 LRIP++A+ DTN +PD +DY+IP NDD+SRSIA+ +A Sbjct: 180 LRIPVIAICDTNVDPDPIDYIIPANDDTSRSIAIITHHIAD 220 >gi|281421418|ref|ZP_06252417.1| ribosomal protein S2 [Prevotella copri DSM 18205] gi|281404490|gb|EFB35170.1| ribosomal protein S2 [Prevotella copri DSM 18205] Length = 256 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 98/256 (38%), Positives = 146/256 (57%), Gaps = 1/256 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDQLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKTI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK Q D V E A VN +W GGM+TN+ T+ ++++K+ +++ L Sbjct: 61 AKTGRKILFVATKKQVKDVVAEKAASINMPYVNERWAGGMLTNFPTIRKAVKKMANIDRL 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LN +K+E L + R+R KL++ L I DM LP +FVVD +E +A++EA RL Sbjct: 121 LNDGTFSNLSKRELLQVSRQRAKLEKNLGSIADMARLPVALFVVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P VDYVIP NDD+ S+ V A + + + + D +A Sbjct: 181 IPVFGIVDTNSDPKNVDYVIPANDDAKDSVDAILTAVCGAIAEALEERKAEKADDKAAAE 240 Query: 242 ETVVHSKEGMQLEEDS 257 + K+ + +E Sbjct: 241 QKDQPKKKAARKDEAE 256 >gi|295132392|ref|YP_003583068.1| 30S ribosomal protein S2 [Zunongwangia profunda SM-A87] gi|294980407|gb|ADF50872.1| 30S ribosomal protein S2 [Zunongwangia profunda SM-A87] Length = 294 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 101/272 (37%), Positives = 163/272 (59%), Gaps = 2/272 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + +++LL++GV FGH WNP M YI+ ERN HII+L ++ +Q+A + + Sbjct: 1 MA-NKVEVKELLDAGVHFGHLTRRWNPNMAPYIYMERNGIHIINLYKSAAKMQEAGEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA + V E A+++ + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKEIVAEQAEKANMPYITERWPGGMLTNFVTIRKAVKKMASID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL + L I DM LP +FVVD RE +AI+EA++ Sbjct: 120 RMKKDGTFNTLSKKERLQVDRLRAKLDKNLGSIADMTRLPGALFVVDITREHIAIKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VDYVIP NDD+S+SI V+ + ++G++ + S + + Sbjct: 180 LNIPIFAMVDTNSDPREVDYVIPANDDASKSINKVVSYVSESIVEGLSDRKSNKDSKKED 239 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 + + + E + S ++S + A Sbjct: 240 KESKSEKAPKMPKAEGEVPSKDASDKKAMKEA 271 >gi|146299370|ref|YP_001193961.1| 30S ribosomal protein S2 [Flavobacterium johnsoniae UW101] gi|189044939|sp|A5FJG9|RS2_FLAJO RecName: Full=30S ribosomal protein S2 gi|146153788|gb|ABQ04642.1| 30S ribosomal protein S2 [Flavobacterium johnsoniae UW101] Length = 254 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 98/231 (42%), Positives = 150/231 (64%), Gaps = 2/231 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + +++LLE+GV FGH W+P M YI+ ERN HII+L +T +++A + + Sbjct: 1 MA-NKIEVKELLEAGVHFGHMTRKWDPNMAPYIYMERNGIHIINLYKTAAKIEEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V + AK + + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVADKAKAANMPYITERWPGGMLTNFVTIRKAVKKMSSID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +KKERL ++R R KL++ L I DM LP +FVVD E +AI+EA++ Sbjct: 120 KMKKDGTFNTLSKKERLQVDRLRAKLEKNLGSIADMSRLPAALFVVDIKAEHIAIKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 L IP+ A+VDTNS+P VDYVIP NDD+S+SI LV +A I+G++ + Sbjct: 180 LNIPVFAMVDTNSDPREVDYVIPANDDASKSIDKILSLVTTAVIEGLSDRG 230 >gi|195928721|gb|ACG56040.1| ribosomal protein subunit 2 [Agalinis filicaulis] Length = 218 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 122/218 (55%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ D + Sbjct: 1 NINLIEMLEAGVHFGHGTKKWNPKMAPYISAKRKGMHITNLTRTARFLSEICDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +D V AA ++ +CV KWLGGM+TNW T +Q+ RD E Sbjct: 61 GGKQFLIVGTTKTVADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQQFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++++ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 121 TGRLNRRPKRDVAVVKKQLSRLQTYLGGIKYMTGLPDIVIIVDQHKEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 ++V+DTN +PDL D IP NDD SI L + + A Sbjct: 181 TISVIDTNCDPDLADISIPANDDGRSSIRLILNKLVFA 218 >gi|10179736|gb|AAG13860.1| ribosomal protein subunit 2 [Jovellana sp. DePamphilis 90-3] Length = 202 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 KS+A+ V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KSKAAGSVASAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLYRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|156743847|ref|YP_001433976.1| 30S ribosomal protein S2 [Roseiflexus castenholzii DSM 13941] gi|209573678|sp|A7NQW2|RS2_ROSCS RecName: Full=30S ribosomal protein S2 gi|156235175|gb|ABU59958.1| ribosomal protein S2 [Roseiflexus castenholzii DSM 13941] Length = 263 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 112/257 (43%), Positives = 162/257 (63%), Gaps = 3/257 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLESG FGH+ WNPKM YIF RN HIIDL +T+ L +A Q I +TVA Sbjct: 9 VSMRALLESGAHFGHQTKRWNPKMRPYIFTARNGIHIIDLQKTITGLTEAYQFIVETVAA 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G ++LFV TK QA + + E A R+ Q V +WLGG +TN+ T+ + ++ L +LEE Sbjct: 69 GNKVLFVGTKKQAQETIAEEATRADQLYVIQRWLGGTLTNFVTIRKRLRYLINLEEQRAR 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E TK E L + + +KL + GI+ M LP +F+VD ++E LA++EA ++ IPI Sbjct: 129 GEFNKLTKAEALKRDAEIEKLNKIFGGIKTMDRLPGALFIVDPHKEDLAVKEANKVGIPI 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDTN +PDL+DYVIP NDD+ RSI L +A AAI+G R+ S + AD + ++ Sbjct: 189 VAMVDTNCDPDLIDYVIPCNDDAIRSIRLIAAKIADAAIEGRNRRES-LQADV-AYSQSH 246 Query: 245 VHSKEGMQLEEDSQSSE 261 H+ + E++++ E Sbjct: 247 DHAMAERMIAEEAEAVE 263 >gi|218128470|ref|ZP_03457274.1| hypothetical protein BACEGG_00040 [Bacteroides eggerthii DSM 20697] gi|317475705|ref|ZP_07934965.1| ribosomal protein S2 [Bacteroides eggerthii 1_2_48FAA] gi|217989361|gb|EEC55674.1| hypothetical protein BACEGG_00040 [Bacteroides eggerthii DSM 20697] gi|316908161|gb|EFV29855.1| ribosomal protein S2 [Bacteroides eggerthii 1_2_48FAA] Length = 278 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 93/241 (38%), Positives = 144/241 (59%), Gaps = 2/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVVDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAEK-VDMEAAG 239 Query: 242 E 242 E Sbjct: 240 E 240 >gi|255690538|ref|ZP_05414213.1| ribosomal protein S2 [Bacteroides finegoldii DSM 17565] gi|260623992|gb|EEX46863.1| ribosomal protein S2 [Bacteroides finegoldii DSM 17565] Length = 278 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 94/246 (38%), Positives = 146/246 (59%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A+ V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAQSVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYANLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS 247 E + Sbjct: 240 EAPANK 245 >gi|148284632|ref|YP_001248722.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Boryong] gi|146740071|emb|CAM80204.1| 30S ribosomal protein S2 [Orientia tsutsugamushi str. Boryong] Length = 308 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 110/241 (45%), Positives = 159/241 (65%), Gaps = 4/241 (1%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI-S 60 L TI +LL++G+ +GH+ WNPKM YI+ +R++ HII+L TV + +VI Sbjct: 25 TLSSVTISELLDAGIHYGHKASRWNPKMAPYIYGKRDDVHIINLDYTVSQIDVISKVIYK 84 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + GRILFV T+ D V + A+ QY V +WLGGM+TNW TVS++I KL LE Sbjct: 85 EIKEKNGRILFVDTRR-HRDIVAQYAENCGQYYVTHRWLGGMLTNWVTVSKAINKLDQLE 143 Query: 121 ELLNKENQ--GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + L + G+TK+E L+++R RD L R+ GIR+MGG P L+ V+D N++ +A++EAR Sbjct: 144 KKLADPEKIVGYTKREILSMQRMRDNLHRSFGGIRNMGGKPTLLIVMDINKDHIAVKEAR 203 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 R +IPI+A+VDTNS+PDLVDY IPGNDD+ RSI L+C + + A + I + G D Sbjct: 204 REKIPIIAIVDTNSDPDLVDYPIPGNDDAIRSIRLYCKIFSDAVLLAIEHMLAASGVDLG 263 Query: 239 S 239 + Sbjct: 264 A 264 >gi|6650152|gb|AAF21744.1|AF055156_1 ribosomal protein subunit 2 [Leucophyllum frutescens] Length = 202 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKK 133 K++A+D V AA ++ CVN KWLGGM+TNW T + K RDL E K+ Sbjct: 61 KNKAADSVAWAAIKARCNCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTERLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|253567186|ref|ZP_04844636.1| 30S ribosomal protein S2 [Bacteroides sp. 3_2_5] gi|251944017|gb|EES84536.1| 30S ribosomal protein S2 [Bacteroides sp. 3_2_5] Length = 278 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 98/277 (35%), Positives = 156/277 (56%), Gaps = 3/277 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDALLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V E A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTTIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TADGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A I+G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMIEGLEERKAEK-IDMEAAG 239 Query: 242 ETVVHS-KEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 E + K+ +S E ++ + A + E Sbjct: 240 EAPANKGKKKSAKARLDKSDEEAINAAKAAAFLKEDE 276 >gi|167765411|ref|ZP_02437524.1| hypothetical protein BACSTE_03799 [Bacteroides stercoris ATCC 43183] gi|329957318|ref|ZP_08297838.1| ribosomal protein S2 [Bacteroides clarus YIT 12056] gi|167697039|gb|EDS13618.1| hypothetical protein BACSTE_03799 [Bacteroides stercoris ATCC 43183] gi|328523031|gb|EGF50134.1| ribosomal protein S2 [Bacteroides clarus YIT 12056] Length = 278 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 92/246 (37%), Positives = 145/246 (58%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVHS 247 E + Sbjct: 240 EAPANK 245 >gi|50233964|ref|YP_052742.1| ribosomal protein S2 [Oryza nivara] gi|68052947|sp|Q6ENI1|RR2_ORYNI RecName: Full=30S ribosomal protein S2, chloroplastic gi|49614988|dbj|BAD26771.1| ribosomal protein S2 [Oryza nivara] Length = 236 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G L V TK +A+D V AA R+ + VN KW GM+TNW + + RDL Sbjct: 67 QGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 125 KE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 E K++ ++RK L R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 MEKFHHLPKRDVAILKRKLSTLLRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +++ DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRS 230 >gi|224536218|ref|ZP_03676757.1| hypothetical protein BACCELL_01085 [Bacteroides cellulosilyticus DSM 14838] gi|224522161|gb|EEF91266.1| hypothetical protein BACCELL_01085 [Bacteroides cellulosilyticus DSM 14838] Length = 278 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 149/262 (56%), Gaps = 4/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVADKASAVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREVLQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++SI + D +A +G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPSNIDFVIPANDDATKSIEVILDACCAAMQEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVH--SKEGMQLEEDSQSSE 261 E + K+ + D E Sbjct: 240 EAPANKGKKKATKARLDKSDEE 261 >gi|78171804|gb|ABB28900.1| SSU ribosomal protein S2P [Chlorobium chlorochromatii CaD3] Length = 243 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 106/245 (43%), Positives = 144/245 (58%), Gaps = 3/245 (1%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +L +GV FGH W PKM+ YIF E+N HIIDL +T + AL+ + G I+ Sbjct: 1 MLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLQKTAELANTALKALEAIAQTGREIM 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQG 129 FV TK QA + E A RS V+ +WLGGM+TN++T+ QSI+++ ++ + + Sbjct: 61 FVGTKKQAKVIIAEQATRSNMPYVSERWLGGMLTNFQTIRQSIRRMNSIDRMATDGTYDM 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKERL + R+R+KL R L GI M LP +FVVD +E LAI+EAR L IP+ A+VD Sbjct: 121 ITKKERLMLGREREKLMRILGGIATMNRLPAALFVVDIKKEHLAIKEARTLGIPVFAMVD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKE 249 TN +P+LVDYVIP NDD+ RSI L VA I+ AR+ + E V + Sbjct: 181 TNCDPELVDYVIPANDDAIRSIQLMVKAVADTIIN--ARELKVEQEVLATMDEAEVEGDK 238 Query: 250 GMQLE 254 E Sbjct: 239 EDISE 243 >gi|6650166|gb|AAF21751.1|AF055163_1 ribosomal protein subunit 2 [Gratiola pilosa] Length = 202 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V T Sbjct: 1 GVHFGHCTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K++A+D V AA R+ + VN KWLGGM+TNW T + K RDL E K+ Sbjct: 61 KNKAADSVAWAAIRARCHFVNKKWLGGMLTNWATTETRLXKFRDLRLEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECMTXGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|196230880|ref|ZP_03129741.1| ribosomal protein S2 [Chthoniobacter flavus Ellin428] gi|196225221|gb|EDY19730.1| ribosomal protein S2 [Chthoniobacter flavus Ellin428] Length = 241 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 98/241 (40%), Positives = 148/241 (61%), Gaps = 1/241 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +LLE+GV FGH+ WNPKM+ YIF +RN +II+L +TV L +A +S Sbjct: 1 MSTELMTELLEAGVHFGHQTKRWNPKMKPYIFEKRNAIYIINLGKTVEQLSEATDFLSTV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 R G++LFV K QA + + EAA S Q+ VN +WLGG +TN T+ +SI +++ +E L Sbjct: 61 AQRNGKVLFVGCKKQAQEAIKEAAIASGQFYVNQRWLGGTLTNLATIRKSIARMKYIENL 120 Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + E K+E ++R+ +KLKR L+GIRDM LPD + V+DT RE +A+ EA+RL+ Sbjct: 121 EKQSEYSKMGKQEIAAVKREGEKLKRNLEGIRDMEKLPDAIVVIDTTREAIAVAEAKRLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP VA+VDTN++P+L+ Y I GNDD+ R+I + + + + + Sbjct: 181 IPTVAIVDTNADPELISYPIAGNDDAIRAIRIVLQKLVDSMVSAQTGRTKKDQEALAGVS 240 Query: 242 E 242 E Sbjct: 241 E 241 >gi|195928709|gb|ACG56034.1| ribosomal protein subunit 2 [Agalinis divaricata] Length = 218 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 3/218 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+ V GH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NINLEEMLEARVHLGHGTRKWNPKMAPYISAKRKGRHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G + L V TK + A+D V AA ++ +CVN KWLGGM+TNW +QK R+L Sbjct: 61 GGKQFLIVGTKKKNMATDLVAWAALKARCHCVNKKWLGGMLTNWSITETRLQKFRNLRMK 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ ++R+ +L+ L GI+ M GLPD++ +VD ++E A++E L Sbjct: 121 QKTGRLNRLPKRDAAVVKRQLSRLQTYLGGIQYMTGLPDIVIIVDQHKEYRALRECITLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 IP + ++DTN +PDL D IP NDD SI L + + Sbjct: 181 IPTICLIDTNCDPDLADIPIPANDDGIFSIRLILNKLV 218 >gi|329962604|ref|ZP_08300552.1| ribosomal protein S2 [Bacteroides fluxus YIT 12057] gi|328529635|gb|EGF56533.1| ribosomal protein S2 [Bacteroides fluxus YIT 12057] Length = 278 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 93/246 (37%), Positives = 145/246 (58%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++SI + D +A +G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPSNIDFVIPANDDATKSIEVILDACCAAMQEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVHS 247 E + Sbjct: 240 EAAANK 245 >gi|189463709|ref|ZP_03012494.1| hypothetical protein BACINT_00042 [Bacteroides intestinalis DSM 17393] gi|189438659|gb|EDV07644.1| hypothetical protein BACINT_00042 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 149/262 (56%), Gaps = 4/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++SI + D +A +G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPSNIDFVIPANDDATKSIEVILDACCAAMQEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVH--SKEGMQLEEDSQSSE 261 E + K+ + D E Sbjct: 240 EAPANKGKKKATKARLDKSDEE 261 >gi|319900033|ref|YP_004159761.1| SSU ribosomal protein S2P [Bacteroides helcogenes P 36-108] gi|319415064|gb|ADV42175.1| SSU ribosomal protein S2P [Bacteroides helcogenes P 36-108] Length = 278 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 91/246 (36%), Positives = 145/246 (58%), Gaps = 2/246 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N +K+E L I R+R KL + L I D+ LP +F++D +E +A++EA RL Sbjct: 121 TNDGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFIIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVHS 247 E + Sbjct: 240 EAPANK 245 >gi|311748346|ref|ZP_07722131.1| ribosomal protein S2 [Algoriphagus sp. PR1] gi|126576855|gb|EAZ81103.1| ribosomal protein S2 [Algoriphagus sp. PR1] Length = 253 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 100/253 (39%), Positives = 154/253 (60%), Gaps = 1/253 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + LL++GV FGH W+P+M YIF E+N HIIDL++T+ L +A I Sbjct: 1 MAKLEYKDLLDAGVHFGHLTRKWDPRMAPYIFMEKNGIHIIDLNKTLACLDEASNAIKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +++FVATK QA D V E AKR V +WLGGM+TN+ T+ +S++K+ L++L Sbjct: 61 VRSGKKVMFVATKKQAKDLVAEEAKRLNMPFVTERWLGGMLTNFATIRKSLKKMSGLDKL 120 Query: 123 LNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +E KKERL + R++DK++ L GI D+ LP +F+VD RE +AI EA++L Sbjct: 121 MKEEAYTNLAKKERLMVSRQKDKMENVLGGIADLSRLPAALFIVDIKREHIAIAEAKKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNSNP+ V++ IP NDD+ +S++L +A +G++ + S Sbjct: 181 IPVYALVDTNSNPNEVEFPIPANDDAFKSVSLLVKAFGAAIEEGLSERKKDKEEAKLSEE 240 Query: 242 ETVVHSKEGMQLE 254 E + + E Sbjct: 241 EEAKKAVDAETKE 253 >gi|242910208|ref|YP_002970633.1| ribosomal protein S2 [Alsophila spinulosa] gi|218454877|gb|ACK77214.1| ribosomal protein S2 [Alsophila spinulosa] Length = 250 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 123/235 (52%), Gaps = 1/235 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ +GV FGH+ WNP+M YIF ER HI+D +QT + +A + D A Sbjct: 7 NIDLEGMMGAGVHFGHQTQKWNPRMSPYIFTERKGVHILDPTQTARLSSEACDSVFDAAA 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G L V TK Q +D V AA RS + VN KWLGG +TN T +++ + L + Sbjct: 67 EGKEFLTVGTKYQVADLVASAATRSRCHYVNEKWLGGTLTNRSTTETRLRRFQYLRNGED 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KKE ++R+ +LK+ L GI+ M LPD++ + D + + +A++E L IP Sbjct: 127 TGGFDRLPKKEAAILKRQLLRLKKYLGGIQYMSDLPDIVTITDQHEQSIALEECIILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 + VVDT+ +PDL D IPGNDD+ SI D A +G + D Sbjct: 187 TICVVDTDRDPDLTDIPIPGNDDARSSIRRILDKSTLAIREGRSNSKVPESTDGG 241 >gi|195941861|ref|ZP_03087243.1| 30S ribosomal protein S2 [Borrelia burgdorferi 80a] Length = 255 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 100/255 (39%), Positives = 166/255 (65%), Gaps = 4/255 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 1 MKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQSVIKDGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LFV TK QAS+ + + AKRS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 61 KVLFVGTKKQASEIIEQEAKRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI++ Sbjct: 121 FDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLKIPIIS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTKSAGET 243 VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + E Sbjct: 181 VVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEEDLMKEI 240 Query: 244 VVHSKEGMQLEEDSQ 258 + + + +EE + Sbjct: 241 EIKNDKSNSIEERGE 255 >gi|170784780|ref|YP_001718696.1| ribosomal protein S2 [Trachelium caeruleum] gi|209573646|sp|A9QC56|RR2_TRACE RecName: Full=30S ribosomal protein S2, chloroplastic gi|156598791|gb|ABU85649.1| ribosomal protein S2 [Trachelium caeruleum] gi|157267528|gb|ABV26521.1| ribosomal protein S2 [Trachelium caeruleum] Length = 248 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 4/234 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE---RNNTHIIDLSQTVPMLQKALQVISD 61 T+ +++++ V GH WNPKM YIF + R H+ +L T L +A V+ + Sbjct: 7 NITLDEMMDASVHLGHDTKQWNPKMAPYIFPKCTTRKGIHLTNLFTTARFLSEACDVVFN 66 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 +R + L V TK +A+D V+ AA R+ + VN KWL GM+TNW T + K RDL Sbjct: 67 AASRENQFLIVGTKKKAADSVLRAAIRAQCHYVNKKWLSGMLTNWSTTETRLHKFRDLRI 126 Query: 122 LLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + K++ ++R+ L+R+L GI+ M LPD + ++D ++ A++E +L Sbjct: 127 KEKRGRLKRLPKRDAAILKRQLSHLQRSLGGIKYMTKLPDFVIIIDQQKDYTALRECIKL 186 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP ++++DTNS+PDL IP NDDS SI + + A +G G Sbjct: 187 GIPTISLIDTNSDPDLASLSIPANDDSRSSIKFILNKLVFAIREGRYESIGNSG 240 >gi|160890598|ref|ZP_02071601.1| hypothetical protein BACUNI_03043 [Bacteroides uniformis ATCC 8492] gi|270295733|ref|ZP_06201933.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479863|ref|ZP_07938981.1| ribosomal protein S2 [Bacteroides sp. 4_1_36] gi|156859597|gb|EDO53028.1| hypothetical protein BACUNI_03043 [Bacteroides uniformis ATCC 8492] gi|270273137|gb|EFA18999.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316903972|gb|EFV25808.1| ribosomal protein S2 [Bacteroides sp. 4_1_36] Length = 277 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 150/262 (57%), Gaps = 4/262 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDTLLEAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA V + A V +W GGM+TN+ T+ ++++K+ +++L Sbjct: 61 AKSGKKVLFVATKKQAKQVVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+E L I R+R KL + L I D+ LP +FV+D +E +A++EA RL Sbjct: 121 TSDGTYSNLSKREILQISRQRAKLDKTLGSIADLTRLPSALFVIDVMKENIAVREANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ +VDTNS+P +D+VIP NDD+++S+ + D +A +G+ + + D ++AG Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPANDDATKSVEVILDACCAAMQEGLEERKAEK-VDMEAAG 239 Query: 242 ETVVH--SKEGMQLEEDSQSSE 261 E + K+ + D E Sbjct: 240 EAPANKGKKKATKARLDKSDEE 261 >gi|2734699|gb|AAB93701.1| ribosomal protein subunit 2 [Tozzia alpina] Length = 204 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K+ A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNNAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ L+ LDGI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSHLQTYLDGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ SI L + Sbjct: 181 PNLADISIPANDDAISSIRLILNK 204 >gi|46445770|ref|YP_007135.1| 30S ribosomal protein S2 [Candidatus Protochlamydia amoebophila UWE25] gi|61215578|sp|Q6MEY9|RS2_PARUW RecName: Full=30S ribosomal protein S2 gi|46399411|emb|CAF22860.1| probable 30S ribosomal protein S2 [Candidatus Protochlamydia amoebophila UWE25] Length = 272 Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats. Identities = 93/219 (42%), Positives = 147/219 (67%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I+ LLE+G FGH+ WNPKM+R+IF ERN +IIDL++T+ ++ A+ ++ D VA+ Sbjct: 11 ISIKDLLEAGAHFGHQTSRWNPKMKRFIFEERNGLYIIDLAKTLQQIRNAVDIVRDVVAK 70 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA + E +++ ++ V +WLGGM+TN T+ QS++KL +E+ ++ Sbjct: 71 HKSILFVGTKKQAKAVLRELSEQCGEFYVCERWLGGMLTNLSTIRQSVKKLERIEKRIST 130 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G TKKE + + + KL++ L G+R M P L+ VVD ++E LA+ EA +L IP++ Sbjct: 131 GGEGLTKKEISLLTKDQIKLEKNLSGVRSMRKPPGLVIVVDPSKEHLAVAEANKLGIPVM 190 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTN +PD +++VI NDD+ +SI L + +A A ID Sbjct: 191 GLVDTNCDPDPIEHVIACNDDALKSIKLILETLAKAIID 229 >gi|283794880|ref|YP_003359233.1| ribosomal protein S2 [Cryptomonas paramecium] gi|253981852|gb|ACT46769.1| ribosomal protein S2 [Cryptomonas paramecium] Length = 231 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 81/225 (36%), Positives = 137/225 (60%), Gaps = 1/225 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q + LLE+GV FGH+ WNPKM YI+ E+N THII+ ++ +L KA + + Sbjct: 1 MKQIALSDLLEAGVHFGHQTNKWNPKMLPYIYAEKNGTHIINGIESAKLLAKACNFVKEA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 +G + LF+ TK QA++ V A++ Y +N +WLGG +TNW + ++ L+ LE+ Sbjct: 61 SQKGKKFLFIGTKRQATNIVASEAEKCGAYFINQRWLGGTLTNWPIIKSRVEALKRLEKN 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKE ++ +KL + L GI++M LPDL ++D +E A++E +++ Sbjct: 121 SIGPSLDKVSKKEITAHKKNLEKLNKNLKGIKNMKQLPDLAIIIDQQKEITAVKECIKMK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 IP++ ++DTN +P L D IP NDDS++SI L + ++ + ++G Sbjct: 181 IPVICLLDTNCDPSLADIPIPANDDSAKSIKLILEKLSESIVEGK 225 >gi|332291329|ref|YP_004429938.1| ribosomal protein S2 [Krokinobacter diaphorus 4H-3-7-5] gi|332169415|gb|AEE18670.1| ribosomal protein S2 [Krokinobacter diaphorus 4H-3-7-5] Length = 278 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 97/242 (40%), Positives = 149/242 (61%), Gaps = 2/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA I++LL++GV FGH W+P M YI+ ERN HII+L +T +++ + + Sbjct: 1 MA-NNIEIKELLDAGVHFGHLTRRWDPNMAPYIYMERNGIHIINLYKTAAKIEETCEALQ 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E A+ + + +W GGM+TN+ T+ ++++K++ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVAEKARNANMPYITERWPGGMLTNFVTIRKAVKKMQTID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +KKE+L + R R+KL + L I DM LP +FVVD RE +AI+EA++ Sbjct: 120 QMKKDGRFDTLSKKEKLQMNRLREKLDKNLGSISDMTRLPGALFVVDIKREHIAIKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VDY+IP NDD+S+SI V+ A G+A + + A + Sbjct: 180 LNIPIFAMVDTNSDPREVDYLIPANDDASKSIDKIVGFVSEAVSAGLADRKAGKDAAKEG 239 Query: 240 AG 241 Sbjct: 240 DD 241 >gi|30468231|ref|NP_849118.1| ribosomal protein S2 [Cyanidioschyzon merolae strain 10D] gi|75272297|sp|Q85FR5|RR2_CYAME RecName: Full=30S ribosomal protein S2, chloroplastic gi|30409331|dbj|BAC76280.1| 30S ribosomal protein S2 [Cyanidioschyzon merolae strain 10D] Length = 221 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 91/220 (41%), Positives = 138/220 (62%), Gaps = 3/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+QLLE+GV GH+ WNPKM Y++ +R HIIDL QT +L +A + ++ V+ G Sbjct: 4 IQQLLEAGVHLGHQAKRWNPKMLPYLYTQRMGIHIIDLVQTAHLLNQACETLTVQVSEGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QAS V E A R ++ +N +WLGG++TNW TV +++ R+ LL + Sbjct: 64 RVLFVGTKPQASVVVEEEATRCGEFFINQRWLGGLLTNWTTVQSRLKRWRE---LLEADM 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 TKKE + R+ ++L R + GI++M +PD++ VVD N+E A+ E +L I + + Sbjct: 121 DHLTKKEASALRRELNQLNRQMRGIQNMDQIPDIVIVVDPNKENTAVLECHKLGILTIGI 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VDTN++P+ VD IP NDD+ S+ L +A A + G + Sbjct: 181 VDTNADPESVDLAIPANDDAIASLQLILSCLADAILKGKS 220 >gi|6650136|gb|AAF21736.1|AF055148_1 ribosomal protein subunit 2 [Melampyrum sylvaticum] Length = 202 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADLVVWAAIKARCHCVNKKWLGGMLTNWATTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD E +A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQYEEYMALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 P+L D IP NDD+ SI L Sbjct: 181 PNLADISIPANDDAISSIRLIL 202 >gi|189500934|ref|YP_001960404.1| 30S ribosomal protein S2 [Chlorobium phaeobacteroides BS1] gi|189496375|gb|ACE04923.1| ribosomal protein S2 [Chlorobium phaeobacteroides BS1] Length = 260 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 101/253 (39%), Positives = 148/253 (58%), Gaps = 9/253 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +F + +L +GV FGH W PKM+ YIF E+N HIIDL +T+ M + A++ I Sbjct: 8 RFQLEDMLRAGVHFGHLARRWCPKMKPYIFMEKNGVHIIDLKKTLVMAEDAMKAIEAIAM 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 G I+FV TK QA + A+++ V+ +WLGGM+TN+ T+ QSI+++ ++ + Sbjct: 68 TGREIMFVGTKKQAKAIISAEAEQAGMPYVSERWLGGMLTNFSTIRQSIRRMNSIDRMET 127 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKERL + R+++KL R L GI M LP +FVVD +E +A++EAR L IP Sbjct: 128 DGTFDMITKKERLMLVREKEKLMRILGGIATMTRLPAALFVVDIKKEHIAVREARSLGIP 187 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG--------A 235 I A+VDTN +PD VDYVIP NDD+ RSI L VA + + +Q Sbjct: 188 IFALVDTNCDPDEVDYVIPANDDAIRSIQLMVKGVAESIANARQQQAEEAAMAEMEEAVE 247 Query: 236 DTKSAGETVVHSK 248 D ++AG+ + Sbjct: 248 DNQAAGDEAAEKE 260 >gi|6650164|gb|AAF21750.1|AF055162_1 ribosomal protein subunit 2 [Calceolaria sp. dePamphilis 90.203] gi|10179734|gb|AAG13859.1| ribosomal protein subunit 2 [Calceolaria mexicana] Length = 202 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 116/202 (57%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM Y +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYTSAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 KS+A+ V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KSKAAGSVASAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLYRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|6650134|gb|AAF21735.1|AF055147_1 ribosomal protein subunit 2 [Orobanche cernua] Length = 202 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K QA++ V AA ++ +CVN KWLGG +TNW T + + RDL E + K+ Sbjct: 61 KKQAANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKRCPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 ++ ++R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN + Sbjct: 121 DKAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PD+ D IP NDDS SI L Sbjct: 181 PDIADLSIPANDDSISSIRLIL 202 >gi|197131524|gb|ACH47280.1| ribosomal protein S2 [Pelargonium cotyledonis] Length = 267 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 4/260 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +L + V GH WNP+M Y++ + + HI +L++T L +A ++ D + Sbjct: 7 NIQLEDMLAARVHLGHDIKQWNPRMAPYLYAKFKDNHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 +G + L V TK +A++ V AA ++ + VN KWLGGM+TNW T + + K RD + + Sbjct: 67 KGKQFLIVGTKKEAANSVARAAIKAECHYVNKKWLGGMLTNWSTTQKRLCKFRDLIRQQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+++L G++ M LPD++ VVD E A++E L IP Sbjct: 127 TGGLNRLPKRDAAILKRQLSHLQKSLGGVKYMKKLPDIVIVVDQQNEFTALRECITLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA---RQHSYMGADTKSA 240 + ++DTN +PDLVD IP NDDS SI + + A G + R + + TK+ Sbjct: 187 TIGLIDTNCDPDLVDLPIPANDDSIPSIRFILNKLIFAICMGRSSSIRTTTIRPSHTKAK 246 Query: 241 GETVVHSKEGMQLEEDSQSS 260 + K+ +++E + Sbjct: 247 QKMKEKMKDKTEMKEKKRDE 266 >gi|331268166|ref|YP_004347815.1| ribosomal protein S2 [Chlorella variabilis] gi|325296343|gb|ADZ05063.1| ribosomal protein S2 [Chlorella variabilis] Length = 264 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 86/248 (34%), Positives = 139/248 (56%), Gaps = 2/248 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L + + +++SG+ FGH WNP+M YI+ ERN HI+DL QT +L K L + D Sbjct: 2 LQRVKLEDMIQSGMHFGHSTREWNPRMAPYIYGERNGRHILDLVQTYYLLNKVLAFLEDQ 61 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G LFV TK QA+ + + A Y VN +WLGGM+TNW+T+ +S++KL++ + Sbjct: 62 AAQGKTFLFVGTKQQAAPLIAKTALACESYYVNQRWLGGMLTNWRTIQKSLRKLQEYRQA 121 Query: 123 LNKENQGFTKK-ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KK E R++D+L++ L G+ +M LP ++ ++ E A++E R+L Sbjct: 122 EERGDWNLLKKQEIARKRREKDRLEKYLSGVENMSRLPGVVIIIGQTEEIHAVKECRQLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA-DTKSA 240 IP + ++D+N +P L D+ +P NDDS ++ L A G R A TK Sbjct: 182 IPTLTLLDSNCDPGLADWFLPANDDSVSALRLVLGWFQQAVQTGQRRYGEREAAKKTKQK 241 Query: 241 GETVVHSK 248 + V+ + Sbjct: 242 SKQVIRRR 249 >gi|111114945|ref|YP_709563.1| 30S ribosomal protein S2 [Borrelia afzelii PKo] gi|110890219|gb|ABH01387.1| ribosomal protein S2 [Borrelia afzelii PKo] Length = 257 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 98/253 (38%), Positives = 165/253 (65%), Gaps = 4/253 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ + G Sbjct: 1 MKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRVIKDGK 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ ++ Sbjct: 61 KVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKMEVDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+IPI++ Sbjct: 121 FDMISKKEISQLNREKLKLAKNLSGIKDMETLPGAVFIIDPKREQIAINEARKLKIPIIS 180 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTKSAGET 243 VVDTN NPD++D IPGNDD+ RS+ALF +++ A ++ Q + E Sbjct: 181 VVDTNCNPDVIDCPIPGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEEDLMKEI 240 Query: 244 VVHSKEGMQLEED 256 + + + +EE Sbjct: 241 EIKNDKSDSIEEG 253 >gi|167753566|ref|ZP_02425693.1| hypothetical protein ALIPUT_01843 [Alistipes putredinis DSM 17216] gi|167658191|gb|EDS02321.1| hypothetical protein ALIPUT_01843 [Alistipes putredinis DSM 17216] Length = 283 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 154/274 (56%), Gaps = 11/274 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNPKM YIF E+N HIIDL +TV L +A + Sbjct: 1 MSRTDFNTLLEAGAHFGHLKRKWNPKMAPYIFMEKNGIHIIDLHKTVLKLDEAANALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R+LFVATK QA + V E V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGRRVLFVATKKQAKEIVAEKIAAIGMPYVTERWAGGMLTNFPTIRKAVKKMSTIDKM 120 Query: 123 LN-KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N F+K+E+L I R+R KL++ L I D+ LP +FVVD +E A++EA+RL Sbjct: 121 TNDGTFDNFSKREKLQIARQRAKLEKNLGSIADLTRLPAALFVVDVQKESNAVKEAKRLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG----------IARQHS 231 IP+ A+VDT +P +DYVIP NDD+++SIA+ D V A +G A+++ Sbjct: 181 IPVFAMVDTCCDPTDIDYVIPANDDATKSIAVILDAVCGAISEGLEERKLEKEKEAQENE 240 Query: 232 YMGADTKSAGETVVHSKEGMQLEEDSQSSESSVL 265 D + + K+ ++ D++ + + + Sbjct: 241 AHEGDAPAKKDAKPRIKKAVKASVDAEEATVAEV 274 >gi|2734689|gb|AAB93696.1| ribosomal protein subunit 2 [Rhinanthus cristatus] Length = 203 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 1/203 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHLGHGTRXWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQQMGRLXRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCD 216 P+L D IP NDD+ SI L + Sbjct: 181 PNLADISIPANDDAISSIRLILN 203 >gi|73536330|pdb|1X18|E Chain E, Contact Sites Of Era Gtpase On The Thermus Thermophilus 30s Subunit Length = 231 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 141/220 (64%), Gaps = 4/220 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH WNPK RYI+ ERN HIIDL +T+ L++ + I D RGG Sbjct: 1 VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 ILFV TK QA D V A+R+ VN +WLGGM+TN+KT+ Q + +L +LE L E Sbjct: 61 TILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTI-QRVHRLEELEALFASPE 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++L++ L G R + LPD +FVVD +E +A++EAR+L IP++A Sbjct: 120 IEERPKKE--QRLHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIA 177 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + DT+S+PDLVDY+IPGNDD+ RSI L I Sbjct: 178 LADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQAR 217 >gi|195928719|gb|ACG56039.1| ribosomal protein subunit 2 [Agalinis filicaulis] Length = 217 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L + ++ D + Sbjct: 1 NINLIEMLEAGVHFGHGTKKWNPKMAPYISAKRKGMHITNLTRTARFLSEICDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +D V AA ++ +CV KWLGGM+TNW T +Q+ RD E Sbjct: 61 GGKQFLIVGTTKTVADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRLQQFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++++ +L+ L GI+ M GLPD++ +VD ++E A++E L IP Sbjct: 121 TGRLNRRPKRDVAVVKKQLSRLQTYLGGIKYMTGLPDIVIIVDQHKEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 ++V+DTN +PDL D IP NDD SI L + + Sbjct: 181 TISVIDTNCDPDLADISIPANDDGRSSIRLILNKLV 216 >gi|299890917|gb|ADJ57416.1| 30S ribosomal protein S2 [uncultured prymnesiophyte C19847] Length = 215 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 87/225 (38%), Positives = 130/225 (57%), Gaps = 11/225 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ +LL++GV FGH++ WNPKM YI+ E+N H+IDL QT +L A + Sbjct: 1 MTLVTLGELLDAGVHFGHQSSRWNPKMFPYIYTEQNGIHVIDLVQTARLLTHAYNYVQKA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 + G LF+ TK QA++ + E A + Y VN +WLGG++TNW TV ++ L+ ++ Sbjct: 61 ASEGKTFLFIGTKRQAANIIAEEANKCNAYYVNHRWLGGILTNWSTVQGRVEYLKTLNKK 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N E KKE + R +KL++ PD+ VVD RE A+ E R+L Sbjct: 121 EENGEFAKLPKKEAALLRRVHEKLRQN----------PDIAIVVDPKREATAVAECRKLG 170 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I I++++DTN +P++VD IP NDD+ RSI L ++SA I G Sbjct: 171 ITIISILDTNCDPNVVDIPIPANDDAVRSIKLILSTLSSAVISGK 215 >gi|295065721|ref|YP_003587661.1| ribosomal protein S2 [Anomochloa marantoidea] gi|251765245|gb|ACT15399.1| ribosomal protein S2 [Anomochloa marantoidea] Length = 239 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 76/224 (33%), Positives = 123/224 (54%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLKEMIETGVHFGHGIKKWNPKMAPYILAKRKGIHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G L V TK + + V AA R+ + VN KW GM+TNW + + RDL Sbjct: 67 QGKSFLIVGTKKRVAHSVASAAIRARCHYVNKKWFRGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ + +K L+R L GI+ M LPD++ V+D +E +A++E L IP Sbjct: 127 IGKFNHLPKRDAAILRQKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN +PDL + IP NDD+ SI + + A +G + Sbjct: 187 TISLIDTNCDPDLANISIPANDDTMTSIRWILNKLVFAIYEGRS 230 >gi|62184694|ref|YP_219479.1| 30S ribosomal protein S2 [Chlamydophila abortus S26/3] gi|81313120|sp|Q5L763|RS2_CHLAB RecName: Full=30S ribosomal protein S2 gi|62147761|emb|CAH63505.1| putative 30s ribosomal protein s2 [Chlamydophila abortus S26/3] Length = 276 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 153/259 (59%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+KAL + Sbjct: 6 LCNLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRKALPQVCKV 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 66 IKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEKD 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + + TKKE + ++ KL + L+GIR + P L+ VVD + EK+A+ EA++L I Sbjct: 126 LTQNSSYLTKKEIALLAKRHQKLLKNLEGIRYLKKAPGLVIVVDPSYEKIAVAEAKKLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++A+VDTN +P +DYVIP NDDS +SI L + + ID + + + K+ Sbjct: 186 PVLALVDTNCDPTPIDYVIPCNDDSLKSIRLIISTIKDSIIDTKKKLGVEIVSPIKTLDI 245 Query: 243 TVVHSKEGMQLEEDSQSSE 261 + +ED++ + Sbjct: 246 QDSEDMDVYATDEDNRQED 264 >gi|298207400|ref|YP_003715579.1| 30S ribosomal protein S2 [Croceibacter atlanticus HTCC2559] gi|83850036|gb|EAP87904.1| 30S ribosomal protein S2 [Croceibacter atlanticus HTCC2559] Length = 265 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 95/234 (40%), Positives = 147/234 (62%), Gaps = 2/234 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA +++LL++GV FGH WNP M YI+ ERN HII+L ++ +Q+A +S Sbjct: 1 MA-NNIEVKELLDAGVHFGHLTRRWNPNMAPYIYMERNGIHIINLYKSAAKMQEAADALS 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA + V E A+++ + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKEIVAEEAEKANMPYITERWPGGMLTNFVTIRKAVKKMTSVD 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKE+L +ER R KL++ L I DM LP +FVVD RE +A++EA++ Sbjct: 120 RMKKDGRFDTLSKKEKLQVERMRAKLEKNLGSIADMTRLPGALFVVDITREHIAVKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 L IPI A+VDTNS+P VD+ IP NDD+S+S+ V A +DG+ + + Sbjct: 180 LNIPIFAMVDTNSDPREVDFAIPANDDASKSVKKVISYVTDAIVDGLNERKADK 233 >gi|254553687|gb|ACT67302.1| ribosomal protein S2 [Joinvillea plicata] Length = 236 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 +++++E+GV FGH WNP+M YI + THI +L++T L +A ++ D + Sbjct: 7 NINLKEMIEAGVHFGHGIKKWNPRMAPYISAKHKGTHITNLARTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KW GM+TNW + + RDL E Sbjct: 67 RGKSFLIVGTKNRAADSVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + K++ ++RK L+R L GI+ M LPD++ ++D E A++E L IP Sbjct: 127 MGKINHLPKRDAAILKRKLSTLQRYLGGIKYMTRLPDIVIILDQQEEYTALRECTILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL + IP NDD+ SI L + + A +G + Sbjct: 187 TICLIDTNCDPDLANISIPANDDTMASIRLILNKLVFAICEGRS 230 >gi|329942365|ref|ZP_08291175.1| ribosomal protein S2 [Chlamydophila psittaci Cal10] gi|313847603|emb|CBY16591.1| putative 30s ribosomal protein s2 [Chlamydophila psittaci RD1] gi|328815275|gb|EGF85263.1| ribosomal protein S2 [Chlamydophila psittaci Cal10] gi|328914237|gb|AEB55070.1| ribosomal protein S2 [Chlamydophila psittaci 6BC] Length = 276 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 96/259 (37%), Positives = 153/259 (59%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+KAL + Sbjct: 6 LCNLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRKALPQVCKV 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 66 IKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEKD 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + + TKKE + ++ KL + L+GIR + P L+ VVD + EK+A+ EA++L I Sbjct: 126 LTQNSSYLTKKEIALLAKRHQKLLKNLEGIRYLKKAPGLVIVVDPSYEKIAVAEAKKLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++A+VDTN +P +DYVIP NDDS +SI L + + ID + + + K+ Sbjct: 186 PVLALVDTNCDPTPIDYVIPCNDDSLKSIRLIISTIKDSIIDTKKKLGIEIVSPIKTLDV 245 Query: 243 TVVHSKEGMQLEEDSQSSE 261 + ++D++ + Sbjct: 246 QESEDSDIYATDDDNRQED 264 >gi|332664683|ref|YP_004447471.1| 30S ribosomal protein S2 [Haliscomenobacter hydrossis DSM 1100] gi|332333497|gb|AEE50598.1| ribosomal protein S2 [Haliscomenobacter hydrossis DSM 1100] Length = 239 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 100/236 (42%), Positives = 147/236 (62%), Gaps = 1/236 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T ++LL++GV FGH WNPKM YIF ER HIIDL++T+ L +A + Sbjct: 1 MDKPTYKELLDAGVHFGHLKKKWNPKMSPYIFMERKGIHIIDLNRTLDALDRAANAMRQM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +I+FVATK QA D V EAAK + +WLGGMMTN+ T+ +S++K+++++ + Sbjct: 61 AKSGKKIMFVATKKQARDIVSEAAKTVGMPFIADRWLGGMMTNFATIRRSVKKMQNIDRM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + TKKERL + R+RDKL + L GI ++ LP +FVVD + E +AI EA +L Sbjct: 121 LADGTLTSVTKKERLTLTRERDKLDKVLGGIANLNRLPAAIFVVDISHEHIAIAEAHKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 I +VDTNS+P+ VDY IPGNDD+S+S+ + D + A G+ + + Sbjct: 181 IRTFGIVDTNSDPNQVDYAIPGNDDASKSVKIITDYMVEAIRQGLEERKAVKAEKE 236 >gi|298372450|ref|ZP_06982440.1| ribosomal protein S2 [Bacteroidetes oral taxon 274 str. F0058] gi|298275354|gb|EFI16905.1| ribosomal protein S2 [Bacteroidetes oral taxon 274 str. F0058] Length = 271 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 87/239 (36%), Positives = 140/239 (58%), Gaps = 1/239 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q +LLE+G FGH WNP M YIF ERN HI+DL +TV +++A + I Sbjct: 1 MRQTNFEELLEAGAHFGHMKRKWNPAMAPYIFMERNGIHIMDLHKTVAKIEEAAKAIRQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +ILFVATK QA V + A + + +W GGM+TN++T+ ++++K+ ++++ Sbjct: 61 AMSDKKILFVATKKQAKQIVADRAAEAGMPYITERWAGGMLTNFQTIRKAVKKMDAIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +K+ERL I R+R+KL+ L I DM +P +FVVD +E +A+ EA +L Sbjct: 121 STDGTLDTMSKRERLQISRQREKLELNLGSISDMTRIPAAIFVVDVMKEHIAVSEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP+ +VDTNS+P +D+VIP NDD++++I + ++ A +G + A Sbjct: 181 IPVFGIVDTNSDPTNIDFVIPCNDDATKAIDIILSVMVDAIKEGRQEMKMNKAEEDTPA 239 >gi|2734659|gb|AAB93682.1| ribosomal protein subunit 2 [Chelone obliqua] Length = 204 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH + WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGHRKWNPKMASYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + ++DTN + Sbjct: 121 DAAMLKRQLSRLQTYLGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|288925269|ref|ZP_06419204.1| ribosomal protein S2 [Prevotella buccae D17] gi|315607302|ref|ZP_07882302.1| 30S ribosomal protein S2 [Prevotella buccae ATCC 33574] gi|288338034|gb|EFC76385.1| ribosomal protein S2 [Prevotella buccae D17] gi|315251005|gb|EFU30994.1| 30S ribosomal protein S2 [Prevotella buccae ATCC 33574] Length = 277 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 138/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDQLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA + V + A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKEIVADKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MNDGTFANLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ +VDTNSNP +DYVIP NDD+ S+ + V A +G+ + Sbjct: 181 IPVFGIVDTNSNPKNIDYVIPANDDAKDSVEVILAAVCGAIAEGLEER 228 >gi|189501515|ref|YP_001957232.1| 30S ribosomal protein S2 [Candidatus Amoebophilus asiaticus 5a2] gi|238692320|sp|B3EU84|RS2_AMOA5 RecName: Full=30S ribosomal protein S2 gi|189496956|gb|ACE05503.1| ribosomal protein S2 [Candidatus Amoebophilus asiaticus 5a2] Length = 313 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 98/271 (36%), Positives = 153/271 (56%), Gaps = 1/271 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T + LL++GV GH + WNP M +IF E HIIDL++T+ LQ+A + Sbjct: 1 MITLTQKDLLKAGVHLGHLSRKWNPSMAPFIFMESRGIHIIDLNKTLSQLQEAADTLQAV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +ILFVATK QA + V + AK + +WLGG +TN+ T+ + I+KL +E + Sbjct: 61 ARSGKKILFVATKKQAKELVAQTAKSLNMPYMTERWLGGTLTNFITIRRLIKKLTSMERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + + KKE+L I R +DKL+R L G+ D+ LP + VVD +E +A+QEAR+L Sbjct: 121 MKSATYKNMAKKEQLMIARDKDKLERVLGGVLDLTKLPGALVVVDIMKESIAVQEARKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPI+A+ DTN +PDLVDY IP NDD++ +I L + A +G++ + A+ + Sbjct: 181 IPIIALADTNVDPDLVDYPIPSNDDATPAIELIVRTLGEAINEGLSMRQEDKAAEAQDKD 240 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 +G + + + S ++ A Sbjct: 241 AQDTEDNKGARPRGAEKVAYSDADSEEDNAY 271 >gi|83815455|ref|YP_444191.1| ribosomal protein S2 [Salinibacter ruber DSM 13855] gi|83756849|gb|ABC44962.1| ribosomal protein S2 [Salinibacter ruber DSM 13855] Length = 364 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 97/228 (42%), Positives = 139/228 (60%), Gaps = 1/228 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + TI +LL++G FGH WNP+ME+YIF ERNN HIIDL Q+ +L +A + Sbjct: 126 HRVTIEELLKAGAHFGHLTSRWNPRMEKYIFMERNNIHIIDLMQSQVLLDEAAEAAKRFA 185 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RG +ILF TK QA D V E A+ + +WLGG MTN++T+ +SI+++ ++E + Sbjct: 186 RRGKKILFAGTKKQAEDIVREHAEECGMPHMVDRWLGGTMTNFQTIRKSIRRMEEIERMD 245 Query: 124 -NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + KKE+L R+ +KL+ L GIRDM LP +++VD RE +A+ EA L I Sbjct: 246 RDGTLDKLKKKEKLMRLREHEKLEETLGGIRDMANLPSAIYIVDVQREDIAVSEANNLGI 305 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 PI+A+VDTN NP +DY IP NDD+ SI L + A +G+ + Sbjct: 306 PIIAMVDTNGNPKNIDYPIPVNDDALSSIELVTSTLTDAVQEGLQERR 353 >gi|126726484|ref|ZP_01742325.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2150] gi|126704347|gb|EBA03439.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2150] Length = 224 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 119/210 (56%), Positives = 161/210 (76%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M ++I+ +RN HI+DL+QTVP+L AL + TVA+GGRILFV TK QA + EAA+R Sbjct: 1 MGQFIYGDRNGIHIMDLTQTVPLLDAALNAVQQTVAKGGRILFVGTKRQAQTPIAEAAER 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNWKTVS SI +L+ L+E L + G TKKERL +ER++ KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWKTVSNSINRLKKLDENLAEGAAGLTKKERLGMEREQSKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIRDMGG+PDL+FV+D N+E LAI EAR+L IP+VA+VDTN++PD +D+ IPGNDD+S Sbjct: 121 LGGIRDMGGVPDLIFVIDVNKEDLAIAEARKLGIPVVAIVDTNASPDDIDFPIPGNDDAS 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTK 238 R+I L+CDL++ AA+DG++ Q G D Sbjct: 181 RAINLYCDLISRAALDGMSTQMGAAGIDLG 210 >gi|308746026|ref|YP_003934547.1| ribosomal protein S2 [Cheilanthes lindheimeri] gi|302375459|gb|ADL29833.1| ribosomal protein S2 [Cheilanthes lindheimeri] Length = 238 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 82/224 (36%), Positives = 120/224 (53%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ +G+ FGH+ WNPKM YIF ER HI+DL+QT + +A + D A Sbjct: 7 NIDLEGMMAAGIHFGHQTQRWNPKMSSYIFTERRGVHILDLTQTARLPSEACDSVFDAAA 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G V TK Q +D + AA RS + VN KWLGGM+TNW T +++ + L+ + Sbjct: 67 EGKEFPMVGTKHQVTDLIASAALRSQCHYVNEKWLGGMLTNWVTTETRLRRFQYLQTEED 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K+E + + +LK+ L GI+ M PD+ D + + A +E L IP Sbjct: 127 RGGFDRLPKQEAAILRGQLFRLKKCLGGIQYMSDSPDIATTTDQHEQSTAPRECSILGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IPGNDD+ SI D A A +G + Sbjct: 187 TICIVDTDCDPDLVDVPIPGNDDARSSIRWILDKPALAIHEGRS 230 >gi|30352023|ref|NP_848049.1| ribosomal protein S2 [Adiantum capillus-veneris] Length = 235 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 122/223 (54%), Gaps = 1/223 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + ++ +G+ FGH+ WNPKM YIF ER HI+DL+QT +L +A + D Sbjct: 8 IDLEGMMAAGIHFGHQTQRWNPKMSPYIFTERKGVHILDLTQTARLLSEACDSVFDAAVE 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G V TK+Q +D ++ AA +S + VN KWL G +TNW T +++ + L+ + Sbjct: 68 GKEFPMVGTKNQVTDLIVSAALKSQCHYVNEKWLAGTLTNWVTTETRLRRFQHLQTGGDL 127 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E K+E ++ +LK+ L GI+ M PD+ + D + +A++E IP Sbjct: 128 GEFDRLPKREAAILKGXLVRLKKCLGGIQYMSDSPDIAIITDQHEXSIALKECSIPGIPT 187 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IPGNDD+ SI D A A +G + Sbjct: 188 ICIVDTDCDPDLVDVPIPGNDDARSSIRWILDKPALAISEGRS 230 >gi|7524785|ref|NP_045787.1| ribosomal protein S2 [Chlorella vulgaris] gi|3024553|sp|P56351|RR2_CHLVU RecName: Full=30S ribosomal protein S2, chloroplastic gi|2224378|dbj|BAA57862.1| 30S ribosomal protein S2 [Chlorella vulgaris] Length = 267 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 84/244 (34%), Positives = 137/244 (56%), Gaps = 1/244 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L + + +++SG+ FGH WNP+M YI+ ERN HI+DL QT +L K L + + Sbjct: 2 LQKVKLEDMIQSGMHFGHSTREWNPRMAPYIYGERNGRHILDLVQTYYLLNKVLAFLEEQ 61 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A+G LFV TK QA+ + + A + VN +WLGGM+TNW+T+ +S++KL++ Sbjct: 62 AAQGKTFLFVGTKQQAAPLIAKTALACESFYVNQRWLGGMLTNWRTIQKSLRKLQEYRRA 121 Query: 123 LNKENQGFTKK-ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KK E R++D+L++ L G+ +M LP ++ ++ E A++E R+L Sbjct: 122 EERGDWNLLKKQEVARKRREKDRLEKYLSGVENMSRLPGVVILIGQTEEIHAVKECRQLG 181 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP V ++D+N +P+L D+ +P NDDS ++ L A G R A + Sbjct: 182 IPTVTLLDSNCDPNLADWFLPANDDSVSALRLILAWFQQAIQTGQLRSLEREAAKKQKIK 241 Query: 242 ETVV 245 +T V Sbjct: 242 KTGV 245 >gi|2734675|gb|AAB93689.1| ribosomal protein subunit 2 [Lathraea clandestina] Length = 204 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHLGHGTRKWNPKMVPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN N Sbjct: 121 DVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCN 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ SI L + Sbjct: 181 PNLADISIPANDDAISSIRLILNK 204 >gi|120434504|ref|YP_860201.1| 30S ribosomal protein S2 [Gramella forsetii KT0803] gi|166225275|sp|A0LXM8|RS2_GRAFK RecName: Full=30S ribosomal protein S2 gi|117576654|emb|CAL65123.1| 30S ribosomal protein S2 [Gramella forsetii KT0803] Length = 299 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 166/279 (59%), Gaps = 2/279 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + +++LL++GV FGH WNP M YI+ ERN HII+L ++ +Q+A ++ Sbjct: 1 MA-NKVDVKELLDAGVHFGHLTRRWNPNMAPYIYMERNGIHIINLYKSAAKMQEAGDALA 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA + V E A+++ + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKEIVAEQAEKANMPYITERWPGGMLTNFVTIRKAVKKMASID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I DM LP +FVVDT RE +AI+EA + Sbjct: 120 RMKKDGTFNSLSKKERLQVDRLRAKLEKNLGSISDMSRLPAALFVVDTTREHIAIKEAHK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VDY+IP NDD+S+SI+ VA + ++G++ + S K Sbjct: 180 LNIPIFAMVDTNSDPREVDYLIPSNDDASKSISKVVSYVADSIVEGLSERKSEKSTKKKE 239 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + + E+ + +E D ++ + E + Sbjct: 240 EKASKEEKSDKAPKEKKEKKAEVPSKDAEDKKAMKEAKN 278 >gi|282881185|ref|ZP_06289872.1| ribosomal protein S2 [Prevotella timonensis CRIS 5C-B1] gi|281304989|gb|EFA97062.1| ribosomal protein S2 [Prevotella timonensis CRIS 5C-B1] Length = 295 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 95/269 (35%), Positives = 151/269 (56%), Gaps = 3/269 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A + + Sbjct: 1 MSRTNFDQLLQAGSHFGHLRRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKDIVAEKAASVNMPYVIERWAGGMLTNFPTIRKAVKKMANIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L + R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 121 MNDGTFANISKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA- 240 IP+ A+VDTNS+P +D+VIP NDD+ SI + A +G+ + + + +A Sbjct: 181 IPVFAIVDTNSDPKNIDFVIPANDDAKDSIDVILTACCQAIAEGLEERKAEKADEKAAAE 240 Query: 241 -GETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E V +K ++ E+ + Sbjct: 241 QSEEVAEAKPKRARRARKEAEETVETSTE 269 >gi|282858724|ref|ZP_06267877.1| ribosomal protein S2 [Prevotella bivia JCVIHMP010] gi|282588473|gb|EFB93625.1| ribosomal protein S2 [Prevotella bivia JCVIHMP010] Length = 287 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 89/228 (39%), Positives = 139/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 22 MSRTNFDQLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGI 81 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK Q+ + V + A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 82 AKSGKKILFVATKKQSKEVVADKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 141 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA RL Sbjct: 142 MNDGTFSNLSKRELLQISRQRAKLEKNLGSISDLTRLPSALFVIDVMKEHIAVKEANRLG 201 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ A+VDTNS+P VDYVIP NDD+ S+ + +A +G+ + Sbjct: 202 IPVFAIVDTNSDPKNVDYVIPANDDAKDSVEVILSACCAAIAEGLEER 249 >gi|2734681|gb|AAB93692.1| ribosomal protein subunit 2 [Orobanche corymbosa] Length = 204 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLFEACNLVFGAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A++ V EAA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAANSVAEAAIKARCHCVNKKWLGGMLTNWSTTETRLYKFRDLRMEQKAGRLNLLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|10179732|gb|AAG13858.1| ribosomal protein subunit 2 [Catalpa sp. SS-83] Length = 202 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTKKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E K+ Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTARLNRLQKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVMKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|330444069|ref|YP_004377055.1| 30S ribosomal protein [Chlamydophila pecorum E58] gi|328807179|gb|AEB41352.1| 30S ribosomal protein [Chlamydophila pecorum E58] Length = 283 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 153/270 (56%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R L+E+G FGH+ WNPKM+ YIF E+N HII+L++T+ L+ +L I Sbjct: 5 ICDISLRDLIEAGAHFGHQTRRWNPKMKIYIFEEKNGLHIINLAKTLQQLRHSLPFIRQV 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V ILFV TK QA V +AA + ++ V+ +WLGGM+TN T+ S++ L +E Sbjct: 65 VEGNKSILFVGTKKQAKCVVRDAAIEAGEFFVSERWLGGMLTNMATIRNSVKTLDKIERN 124 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 FTKKE + +K+ K+ + L+G+R M LP L+ VVD + EK+A+ EAR+L I Sbjct: 125 FEHNPSFFTKKEIALLAKKQQKIIKNLEGVRYMKKLPGLLIVVDPSYEKIAVAEARKLNI 184 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++A+VDTN +P +D+VIP NDDS +SI L +++ I + + + K + Sbjct: 185 PVLALVDTNCDPTPIDHVIPCNDDSLKSIRLIINVIKENIIQVKKKLGITIVSPIKISAG 244 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 E + +++ +++ Sbjct: 245 GFPSFTEEFDDSHPEEEEDTNSDQCEDLLA 274 >gi|197131514|gb|ACH47275.1| ribosomal protein S2 [Geranium carolinianum] Length = 241 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 81/232 (34%), Positives = 130/232 (56%), Gaps = 3/232 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDT 62 + +LL +GV GH WNP+M YI + HI +L++T L +A ++ Sbjct: 7 NIRLEELLAAGVHLGHVIKKWNPRMAPYILISPKHKGNHITNLTRTARFLAEACDLVFYA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 +RG R+L V TK +A++ V+ AA ++ + VN KWLGGM+TNW T ++KLRD E Sbjct: 67 ASRGKRLLIVGTKKEAANYVVRAAIKARCHYVNKKWLGGMLTNWPTTETRLRKLRDLRTE 126 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + K++ ++R+ L++ G++ M GLPD++ +VD + A++E L Sbjct: 127 QKTGRLRLLPKRDAAILKRQLSHLQKYFRGMQYMTGLPDIVIIVDQHDGFTALRECITLG 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP + ++DT+ +PDLVD IP NDDS RSI + + A +G + S + Sbjct: 187 IPTIGLIDTDCDPDLVDLPIPANDDSRRSIRFILNKLVFAICEGRSSSTSSI 238 >gi|32491141|ref|NP_871395.1| 30S ribosomal protein S2 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340384|sp|Q8D2G2|RS2_WIGBR RecName: Full=30S ribosomal protein S2 gi|25166348|dbj|BAC24538.1| rpsB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 240 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 149/221 (67%), Gaps = 1/221 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++ +++SGV FGH+ WNP M+ +IFC++N HII+L +T+ M + A+ +S Sbjct: 1 MLNLSMKDMIQSGVHFGHQTRYWNPNMKPFIFCKKNKVHIINLEKTLIMFEIAMNELSKI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 R G+ILF+ TK AS+ + +A Q+ VN +WLGGM+TNWKTV QSI++L++LE Sbjct: 61 SKRDGKILFIGTKRAASEAIKNSAINCNQFFVNYRWLGGMLTNWKTVRQSIKRLKELESQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + TKKE L R +KL+ +L GI++MGGLPD +FV+D EK +I+EA +L Sbjct: 121 SKDGTFKKLTKKEALIRTRTLNKLENSLGGIKNMGGLPDAIFVIDVEHEKTSIKEANKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 IPI A+VDTNSNP + +VIPGNDDS R+I L+ V+ Sbjct: 181 IPIFAIVDTNSNPKDIKFVIPGNDDSIRAIDLYLKTVSETI 221 >gi|163753795|ref|ZP_02160918.1| 30S ribosomal protein S2 [Kordia algicida OT-1] gi|161326009|gb|EDP97335.1| 30S ribosomal protein S2 [Kordia algicida OT-1] Length = 261 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 146/230 (63%), Gaps = 2/230 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA ++ LLE+GV FGH W+P M YI+ ERN HII+L +T +Q+A + + Sbjct: 1 MA-NNIEVKDLLEAGVHFGHLTRKWDPNMAPYIYMERNGIHIINLYKTAAKIQEANEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E A ++ + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIAASGRKILFVATKKQAKDIVAEKAGKANMPYITERWPGGMLTNFVTIRKAVKKMASID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + +KKERL ++R R KL++ L I DM LP +FVVD RE +AI+EA++ Sbjct: 120 RMKKDGTFMTLSKKERLQVDRLRAKLEKNLGSISDMTRLPGALFVVDIKREHIAIKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 L IPI A+VDTNS+P V+YVIP NDD+S+SI V A I+G++ + Sbjct: 180 LNIPIFAMVDTNSDPREVEYVIPANDDASKSIENILTHVTDAVIEGLSER 229 >gi|323149180|ref|YP_004222009.1| ribosomal protein S2 [Coccomyxa sp. C-169] gi|317467236|gb|ADV29857.1| ribosomal protein S2 [Coccomyxa sp. C-169] Length = 221 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 129/217 (59%), Gaps = 1/217 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++E G+ FGH+ WNPKM YI+ +RN HIIDL QT +++ ++++ ++G L Sbjct: 1 MVEMGLHFGHQARKWNPKMAPYIYTKRNGVHIIDLIQTCVHIKQVASFLTESASQGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQG 129 FV TK QA + + A S + VN +WLGGM+TNW T+ SI KL++LE + Sbjct: 61 FVGTKKQAGGLIAKTASDSNSFYVNQRWLGGMLTNWSTMKLSIAKLKELEARETDGGLDR 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE ++++++L++ L G++DM LPD++ +V E A++E R+L I + V+D Sbjct: 121 LPKKEAALCKKQKERLEKYLGGVKDMMRLPDVVVIVGQPEEMNAVRECRKLGIRSITVLD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 TN +P + D IP NDDS S+ + + A + G Sbjct: 181 TNCDPTVADLFIPANDDSVTSLRFLLQIFSDAILKGQ 217 >gi|83953649|ref|ZP_00962370.1| 30S ribosomal protein S2 [Sulfitobacter sp. NAS-14.1] gi|83841594|gb|EAP80763.1| 30S ribosomal protein S2 [Sulfitobacter sp. NAS-14.1] Length = 261 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 122/246 (49%), Positives = 169/246 (68%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVPML +ALQVI DTVA+GG ILFV TK QA+ + EAA++ Sbjct: 1 MGPFIYGARNGIHIMDLTQTVPMLDQALQVIRDTVAKGGSILFVGTKRQAAQPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E + G TKKERL +ER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKSIDEQSERGFSGLTKKERLGMERDQAKLEAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG PDL+FV+D +E LA+ EA +L IP++AVVDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGRPDLIFVIDVKKEALAVAEANKLGIPVIAVVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 R+I ++CDL A AA+DG++ Q G D + E E +SE +V + Sbjct: 181 RAIHMYCDLAARAALDGMSAQLGAAGVDIGAMEEAPEEEALIDGGVEVGNASEETVSNDA 240 Query: 269 EVAVVP 274 P Sbjct: 241 MAKDAP 246 >gi|225013106|ref|ZP_03703520.1| ribosomal protein S2 [Flavobacteria bacterium MS024-2A] gi|225002764|gb|EEG40746.1| ribosomal protein S2 [Flavobacteria bacterium MS024-2A] Length = 287 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 99/245 (40%), Positives = 149/245 (60%), Gaps = 3/245 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA P+ LL +GV FGH WNP M YI+ ERN HII+L +T +++ + + Sbjct: 1 MAKPEV--NDLLNAGVHFGHLTRKWNPNMAPYIYMERNGIHIINLYKTAAKIEETNEALK 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A G +ILFVATK QA D V E AK + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 59 KIAASGRKILFVATKKQAKDIVAEKAKAVNMPYITERWPGGMLTNFVTIRKAVKKMGSID 118 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + + +KKERL ++R R KL++ L I DM LP +F+VDT RE +A++EA++ Sbjct: 119 RMKKDGTFETLSKKERLQVDRLRAKLEKNLGSITDMTRLPGALFIVDTTREHIAVKEAQK 178 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L+IPI A+VDTNS+P VD+VIP NDD+S+SI LV A +G+ + S + Sbjct: 179 LKIPIFAMVDTNSDPRDVDFVIPSNDDASKSIDKILGLVTGALAEGLKERQSEKEGTAAN 238 Query: 240 AGETV 244 + + Sbjct: 239 DAKEM 243 >gi|161485626|ref|YP_064890.2| 30S ribosomal protein S2 [Desulfotalea psychrophila LSv54] gi|209573714|sp|Q6AP41|RS2_DESPS RecName: Full=30S ribosomal protein S2 Length = 204 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 130/201 (64%), Gaps = 1/201 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++ +L++G+ FGH+ WNPKM+ YI+ RN +I++L T + KA + IS Sbjct: 1 MSQVTVKDMLQAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDLTKRLFDKACEFISSN 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA + E A+R QY V+ +WLGGM+TN++T+ SI +L+ +E + Sbjct: 61 VKNEGSVLFVGTKRQAQSIIKEEARRCGQYYVDHRWLGGMLTNFQTIKNSIDRLKSIEAM 120 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F KKE L + ++R KL+R + GI+DM LP ++ +VD +E +A+ EA +L Sbjct: 121 QEDGSINRFPKKEILLMGKERVKLERNVGGIKDMRALPAVIVIVDPRKESIAVSEAGKLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIP 202 IP+VA+ DTN +PD +DY P Sbjct: 181 IPVVALTDTNCDPDGIDYRNP 201 >gi|50876043|emb|CAG35883.1| probable 30S ribosomal protein S2 [Desulfotalea psychrophila LSv54] Length = 240 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 130/201 (64%), Gaps = 1/201 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q T++ +L++G+ FGH+ WNPKM+ YI+ RN +I++L T + KA + IS Sbjct: 37 MSQVTVKDMLQAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDLTKRLFDKACEFISSN 96 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G +LFV TK QA + E A+R QY V+ +WLGGM+TN++T+ SI +L+ +E + Sbjct: 97 VKNEGSVLFVGTKRQAQSIIKEEARRCGQYYVDHRWLGGMLTNFQTIKNSIDRLKSIEAM 156 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F KKE L + ++R KL+R + GI+DM LP ++ +VD +E +A+ EA +L Sbjct: 157 QEDGSINRFPKKEILLMGKERVKLERNVGGIKDMRALPAVIVIVDPRKESIAVSEAGKLG 216 Query: 182 IPIVAVVDTNSNPDLVDYVIP 202 IP+VA+ DTN +PD +DY P Sbjct: 217 IPVVALTDTNCDPDGIDYRNP 237 >gi|290487152|gb|ADD29960.1| ribosomal protein S2 [Phoradendron serotinum] Length = 236 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 3/228 (1%) Query: 5 QFTIRQLLESGVQFGHRNFL-WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + ++E+G+ GH WNP+ME YI +R HI +L+ + L +A ++ D Sbjct: 7 NIDLEDMMEAGIHLGHSTRRKWNPRMEPYISGKRKGIHITNLTISARFLSEACDLVFDAA 66 Query: 64 ARGGRILFVAT-KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEE 121 +RG ++L V T + +D V A R+ + VN KWLGGM+TNW T + K RD E Sbjct: 67 SRGKQLLMVGTKNKKVADSVAWVAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTE 126 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L + K++ ++R+ ++L+ L GI+ M LPD++ ++D E A++E L Sbjct: 127 LRIGKLNFIPKRDAAMLKRQFNQLQTYLGGIQYMTELPDIVIIIDQQEEYTALRECMALG 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + +DTNS+PDL D IP NDD+ SI + A + G+A Sbjct: 187 IPTICFIDTNSDPDLADISIPANDDAIASIRFVLNKFLFAIMKGLAAS 234 >gi|197131522|gb|ACH47279.1| ribosomal protein S2 [Sarcocaulon vanderietiae] Length = 235 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 78/227 (34%), Positives = 132/227 (58%), Gaps = 4/227 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDT 62 +++LL + V GH WNP+M YI+ +R + HI +L++T L +A ++ Sbjct: 7 NIQLKELLAARVHLGHGIKKWNPRMAPYIYISKKRKDNHITNLTRTARFLAEACDLVFYA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G + L V T+ + ++ V+ AA ++ + VN KWLGGM+TNW +++ RDL+ Sbjct: 67 ASSGKQFLIVDTREEVANSVVRAAIKARCHYVNKKWLGGMLTNWPITQTKLREFRDLKS- 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 ++ G K++ ++R+ +L++ L G++ M LPD++ VVD +A++E L I Sbjct: 126 -AQKTGGLRKRDAAILKRQLSQLEKYLGGVQYMTRLPDIVIVVDQQASIMALRECITLGI 184 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 P + ++DTN +PDLVD IP NDDS RSI L + + A +G +R Sbjct: 185 PTIGLIDTNCDPDLVDLPIPANDDSIRSIRLILNKLVFAICEGRSRS 231 >gi|239794315|dbj|BAH73312.1| ribosomal protein S2 [Cryptomeria japonica] gi|239794398|dbj|BAH73394.1| ribosomal protein S2 [Cryptomeria japonica] Length = 235 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 89/224 (39%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++++ GV FGH WNPKM YIF ER + HII+L+ T L +A + D Sbjct: 7 NINLKEMVKVGVHFGHETRKWNPKMAPYIFKERKDNHIINLTYTARFLSEACDFVFDGAK 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + + V TK Q +D AA + + VN KWL GM+TNW T ++K ++L + N Sbjct: 67 RGKQFMIVGTKHQTADAAKLAALAARCHYVNKKWLAGMLTNWFTTEARLEKFKNLTKKKN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GFTKKE ++R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDGFTKKEAAILKRELNKLQEDLGGIRYMTKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP NDD I L + + A G Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGRGPIRLILNKLILAIRAGRE 230 >gi|172072928|ref|YP_001806689.1| ribosomal protein S2 [Cryptomeria japonica] gi|209573597|sp|B1VKH6|RR2_CRYJA RecName: Full=30S ribosomal protein S2, chloroplastic gi|171854947|dbj|BAG16687.1| ribosomal protein S2 [Cryptomeria japonica] Length = 235 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 88/224 (39%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++++ GV FGH WNPKM YIF ER + HI++L+ T L +A + D Sbjct: 7 NINLKEMVKVGVHFGHETRKWNPKMAPYIFKERKDNHILNLTYTARFLSEACDFVFDGAK 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + + V TK Q +D AA + + VN KWL GM+TNW T ++K ++L + N Sbjct: 67 RGKQFMIVGTKHQTADAAKLAALAARCHYVNKKWLAGMLTNWFTTEARLEKFKNLTKKKN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 GFTKKE ++R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDGFTKKEAAILKRELNKLQEDLGGIRYMTKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP NDD I L + + A G Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGRGPIRLILNKLILAIRAGRE 230 >gi|85703127|ref|ZP_01034231.1| 30S ribosomal protein S2 [Roseovarius sp. 217] gi|85672055|gb|EAQ26912.1| 30S ribosomal protein S2 [Roseovarius sp. 217] Length = 229 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 113/216 (52%), Positives = 162/216 (75%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVP+L AL I +TVA+ GRILFV TK QA+ + EAA++ Sbjct: 1 MGEFIYGARNGIHIMDLTQTVPLLDAALHAIRETVAKNGRILFVGTKRQAAQPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E++ +G TKKERL IER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKQIDEMMEVGAEGLTKKERLGIERDQIKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG+PD++FV+D +E LA+ EA +L IP+V +VDTN +PD +DY+IPGNDD++ Sbjct: 121 LGGIREMGGVPDMLFVIDVKKEALAVAEANKLGIPVVGIVDTNCSPDGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 R+IAL+CDLV+ AA+DG++ Q G D + + Sbjct: 181 RAIALYCDLVSRAALDGMSAQLGAAGVDMGALEDVP 216 >gi|2734685|gb|AAB93694.1| ribosomal protein subunit 2 [Pedicularis foliosa] Length = 199 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 1/199 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKMGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIA 212 PDL D IP NDD+ SI Sbjct: 181 PDLADISIPSNDDAISSIR 199 >gi|3123267|sp|P19679|RS2_SPICI RecName: Full=30S ribosomal protein S2 gi|2384681|gb|AAB69994.1| ribosomal protein S2 [Spiroplasma citri] Length = 359 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 149/221 (67%), Gaps = 2/221 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + T L E+G QFGH+ WNPKM+ YI+ E+N HIIDL QT+ L+ ++++ Sbjct: 1 MA-KELTREMLWEAGAQFGHQTKRWNPKMKPYIYGEKNKIHIIDLQQTLWRLEDVKKLMA 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + AR G+ILFV TK QA V +AA+R + VN +WLGG +TN KT+ +++L ++E Sbjct: 60 NIAARKGKILFVGTKKQAKWIVKDAAERCESFYVNQRWLGGTLTNLKTIHLRVKRLWNIE 119 Query: 121 ELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 N E + KKE++ I++++DKL++ L GI+ M LP +FVVD E +A++EAR+ Sbjct: 120 RQEKNGELKLLPKKEQMLIKKEKDKLEKFLGGIKGMKELPQALFVVDPKEEHIAVREARK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 LRIP++A+ DTN +P +DY+IP NDD+SRSIA+ +A Sbjct: 180 LRIPVIAICDTNVDPVPIDYIIPANDDTSRSIAIITHHIAD 220 >gi|295698564|ref|YP_003603219.1| ribosomal protein S2 [Candidatus Riesia pediculicola USDA] gi|291157406|gb|ADD79851.1| ribosomal protein S2 [Candidatus Riesia pediculicola USDA] Length = 243 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 112/244 (45%), Positives = 157/244 (64%), Gaps = 3/244 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 F+I +++E GV FGH+ WNPKM+ YIF +NN HIIDL +T +L+ A + I+ V Sbjct: 2 HFSISEMIECGVHFGHQRRYWNPKMKDYIFGVQNNIHIIDLEKTSLLLRSASEKINKIVE 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 R G+ILFV TK AS + E+A QY VN +WLGG +TNWKTV QSI+KL +LE ++ Sbjct: 62 RRGKILFVGTKRSASSLIKESAIYCEQYFVNKRWLGGTLTNWKTVRQSIKKLNELESQIR 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + TKKE L RK KL+ +L GI+ M LPD MF++D EK+A++EA L I Sbjct: 122 DGIFKKLTKKEALIRTRKFQKLENSLGGIKKMSMLPDAMFIIDVEHEKIAVKEANILNIQ 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 A+VDTNSNPD +D+VIPGNDDS +SI + + ++ + + ++ S D K + Sbjct: 182 TFAIVDTNSNPDGIDHVIPGNDDSIKSIKFYLEYISHSIR--MTQEKSKNNIDKKYVNDV 239 Query: 244 VVHS 247 +HS Sbjct: 240 FIHS 243 >gi|87310513|ref|ZP_01092642.1| ribosomal protein S2 [Blastopirellula marina DSM 3645] gi|87286734|gb|EAQ78639.1| ribosomal protein S2 [Blastopirellula marina DSM 3645] Length = 243 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 91/235 (38%), Positives = 141/235 (60%), Gaps = 2/235 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++L+ESG+ +GHR WNPKM YI+ ++N HIID+ +T+ L +A + ++ G Sbjct: 10 IKELVESGIHYGHRTSRWNPKMAPYIYAKKNQIHIIDVRETIRGLLRAKKYLTQVSEGGS 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK-E 126 +LFV TK QA + A+R +N +WLGG +TN++T+ + +L +LE +L E Sbjct: 70 LVLFVGTKRQAGASIEREAERCGMPFINERWLGGTLTNFRTIRSRLTRLEELERILEGDE 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++KK + ++ R+ K+ R L+G+R M LP+ + +VD +EK AI+EA L I VA Sbjct: 130 LSKYSKKMQSSLAREYRKMYRNLNGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVA 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 + DT+ +PD +D +PGNDD RSI LF +A A +DG + G D A Sbjct: 190 LTDTDCDPDEIDLPVPGNDDGIRSIELFTKHLADAVLDGKHN-VAMKGKDAVPAS 243 >gi|195928713|gb|ACG56036.1| ribosomal protein subunit 2 [Agalinis fasciculata] Length = 204 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 1/204 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D Sbjct: 1 NIGLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKKRAADLVAWAAIKARCHCVKKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDS 207 + ++DTN +PDL D IP NDD+ Sbjct: 181 TICLIDTNGDPDLADLSIPANDDA 204 >gi|2734661|gb|AAB93683.1| ribosomal protein subunit 2 [Cycnium racemosum] Length = 205 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 116/205 (56%), Gaps = 2/205 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHLGHGPRKWNPKMAPYISGKRKGIHITNLTRTARFLSEACDLVFYAASRGKQFLIVGT 60 Query: 75 -KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTK 132 K +A+D V AA ++ + VN KWLGGM+TNW T + K RD E K Sbjct: 61 QKKKAADSVAWAAIKARSHFVNKKWLGGMLTNWSTTETRLHKFRDLRMEQRAGRLNRLPK 120 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+R L GI+ M GLPD++ ++D + E A++E L IP + ++DTN Sbjct: 121 RDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTICLIDTNC 180 Query: 193 NPDLVDYVIPGNDDSSRSIALFCDL 217 +PDL D IP NDD+ SI L + Sbjct: 181 DPDLADLSIPANDDARSSIRLILNK 205 >gi|256419928|ref|YP_003120581.1| ribosomal protein S2 [Chitinophaga pinensis DSM 2588] gi|256034836|gb|ACU58380.1| ribosomal protein S2 [Chitinophaga pinensis DSM 2588] Length = 340 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 97/226 (42%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +QLLE+GV FGH WNPKM YIF E+ HIIDL++TV LQ+A + G + Sbjct: 9 QQLLEAGVHFGHLKKKWNPKMLPYIFAEKKGIHIIDLNKTVEGLQEAAAALKSIAKSGKK 68 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKEN 127 I+FVATK QA + V EAAKR V +WLGGM+TN+ T+ +S++K++ +E++L + Sbjct: 69 IMFVATKKQAKEIVAEAAKRVNMPYVTERWLGGMLTNFATIRKSVKKMQSIEKMLTDGTF 128 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 TKKERL + R ++K+++ L GI + +P +F+VD + E + + EARRL I + Sbjct: 129 DSITKKERLTLTRDKEKMEKVLGGIAQLARVPAALFLVDISHEHIGLAEARRLGISTFGM 188 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 VDTNS+P VD+ +P NDD+++SIA+ + +A+A +G+A + + Sbjct: 189 VDTNSDPTKVDFAVPANDDATKSIAIITNYIAAAIAEGLAERANEK 234 >gi|165910485|gb|ABY73997.1| ribosomal protein S2 [Calystegia sepium] Length = 204 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L+ T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTVTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++ +D V A+ R+ + VN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKVADSVARASIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKMGGLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L G++ M GLPD+ +VD ++E A++E L IP + ++DTN + Sbjct: 121 DATMLKRQLARLQTYLGGMKYMTGLPDIAIIVDQHKEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ SI + Sbjct: 181 PNLSDISIPANDDAISSIRFILNK 204 >gi|167041124|gb|ABZ05884.1| putative ribosomal protein S2 [uncultured marine microorganism HF4000_001A02] Length = 281 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 100/277 (36%), Positives = 152/277 (54%), Gaps = 1/277 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + LL +G FGH WNP + +I E+N HII+L +T+ L AL IS Sbjct: 1 MAASKVKFEDLLGTGAHFGHVTRKWNPNYKPFILMEKNGVHIINLDETIRHLDIALNFIS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 D + G LFV TK+QA D V + A R + + V +WLGG +TN+ T+ +SI++L LE Sbjct: 61 DKAKKNGEFLFVGTKNQAKDIVQQEADRCSMFYVVERWLGGTLTNFTTIKKSIKRLHMLE 120 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + ++ + TKKE + R+R KL GI+DM LPD + +VD E A++EA L Sbjct: 121 KEGSQIYENQTKKEIQMLNRERIKLSDQHRGIKDMRRLPDAVIIVDAQLESTAVKEAIIL 180 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A+VD+N++P ++DY IP NDDS R+I L ++A +D A+ + + K A Sbjct: 181 GIPIIAIVDSNTDPTIIDYPIPANDDSIRTIQLIMSVIADTILDSTAKTSNKSEKEDKQA 240 Query: 241 GETV-VHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 S ++ E + + + + A V + Sbjct: 241 SNAAGNESSVEIKAESVGTDKKDTPPEEKVEAPVEDA 277 >gi|6650128|gb|AAF21732.1|AF055144_1 ribosomal protein subunit 2 [Orobanche uniflora] Length = 202 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D+ RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACNLVFDSAGRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++ASD V AA ++ +CVN KWLGGM+TNW T + + K RD E +KK Sbjct: 61 KNKASDSVAGAAIKARCHCVNKKWLGGMLTNWSTTEKRLHKFRDLRMEQKTGRINLLSKK 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ ++D + E +A+QE L IP + ++DTN + Sbjct: 121 DAAVVKRELSRLQTYLGGIKYMTGLPDIVIILDQHEEYMALQECITLVIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ S+ L Sbjct: 181 PDLADISIPANDDAISSLRLIL 202 >gi|2734693|gb|AAB93698.1| ribosomal protein subunit 2 [Sopubia cana] Length = 204 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 V FGH WNPKM YI +R HII+L++T L +A ++ +RG + L V T Sbjct: 1 RVHFGHGIRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFYAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++ +D V AA ++ +CVN KWLGGM+TNW T + K RD E + K+ Sbjct: 61 KNKVADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKSGRLNRLXKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DVAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYKALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDARSSIRLILNK 204 >gi|110639411|ref|YP_679620.1| 30S ribosomal subunit protein S2 [Cytophaga hutchinsonii ATCC 33406] gi|123163262|sp|Q11QN6|RS2_CYTH3 RecName: Full=30S ribosomal protein S2 gi|110282092|gb|ABG60278.1| SSU ribosomal protein S2P [Cytophaga hutchinsonii ATCC 33406] Length = 254 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 100/255 (39%), Positives = 151/255 (59%), Gaps = 4/255 (1%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + + LL++GV FGH WNPKM YIF E+N H+IDL++T+ L +A + Sbjct: 1 MA-KKIEYKDLLDAGVHFGHLTRKWNPKMAPYIFMEKNGIHLIDLNKTLVCLDEANAALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V G ++LFVATK QA + V AKR +WLGGM+TN+ TV +S++K+ +E Sbjct: 60 TIVRSGRKVLFVATKKQAQEVVTAEAKRLKMPYATERWLGGMLTNFATVRKSLKKMSSME 119 Query: 121 ELLNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +++ E KKERL + R+++KL++ L GI D+ LP +FVVD +E +AI EA++ Sbjct: 120 KMMKDEAFSSLNKKERLVLSREKEKLEKVLGGIADLTRLPAAIFVVDVKKEHIAIAEAKK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP+ A+VDTNS+P +VD+ IP NDD+ +SI++ + D ++ + D Sbjct: 180 LGIPVFAIVDTNSDPTIVDFPIPANDDAFKSISILTQAIGQGIEDALSERKREK--DDAK 237 Query: 240 AGETVVHSKEGMQLE 254 E K + E Sbjct: 238 LKEDEESKKASDKAE 252 >gi|309322135|ref|YP_003934050.1| ribosomal protein S2 [Geranium palmatum] gi|197131518|gb|ACH47277.1| ribosomal protein S2 [Geranium palmatum] gi|300069228|gb|ADJ66349.1| ribosomal protein S2 [Geranium palmatum] Length = 238 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 3/228 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDT 62 +LL +GV FGHR WNP+M YI + THI +L +T L +A ++ Sbjct: 7 NIRFEELLAAGVHFGHRIKKWNPRMAPYILISPKSKGTHITNLIRTAHFLAEACHLVFYA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G L V TK A++ V+ AA ++ + VN KWL GM+TNW T ++K RDL Sbjct: 67 ASTGKSFLIVGTKKAAANFVVRAAIKARCHYVNKKWLAGMLTNWSTTETRLRKFRDLRAA 126 Query: 123 LNKENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 G K++ ++R+ L++ L G++ M GLPD++ +V + E A++E L Sbjct: 127 QKTGKLGRLPKRDAAILKRQLTHLQKYLGGVQYMTGLPDIVIIVGQHNEFTALRECITLG 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + ++DT+ +PDLVD IP NDDS RSI + + A +G + Sbjct: 187 IPTIGLIDTDCDPDLVDLPIPANDDSRRSIRFILNKLVFAICEGRSSS 234 >gi|2734667|gb|AAB93686.1| ribosomal protein subunit 2 [Harveya purpurea] Length = 201 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 119/201 (59%), Gaps = 1/201 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D + G + L V T Sbjct: 1 GVHFGHGTXKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASGGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E + TK+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKSGRLNRLTKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +LK L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLKTYLGGIKYMTGLPDIVIIVDQHEEXTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALF 214 PDL D IP NDD+ SI L Sbjct: 181 PDLXDISIPANDDAISSIRLI 201 >gi|2734703|gb|AAB93703.1| ribosomal protein subunit 2 [Verbascum blattaria] Length = 204 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L++T L +A ++ D ++G + L V TK++ Sbjct: 4 FGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASKGKQFLIVGTKNK 63 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K++ Sbjct: 64 AADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKRDAA 123 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 124 MVKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 183 Query: 197 VDYVIPGNDDSSRSIALFCDL 217 D IP NDD+ SI L + Sbjct: 184 ADISIPANDDAISSIRLILNK 204 >gi|162945957|gb|ABY20988.1| Rps2 [Thuja plicata] Length = 231 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 90/224 (40%), Positives = 129/224 (57%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++++ GV FGH WNPKM YIF ER ++HII+L+ T L +A + D Sbjct: 7 NINLKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLTYTARFLSEACDFVFDGAK 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + + V TK Q +D AA + + VN KW GM+TNW T ++KL++L + N Sbjct: 67 RGKQFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKLKNLMKQKN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 FTKKE + R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIRYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP ND+S SI L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDNSRGSIRLILNKLILAIRTGKA 230 >gi|323148819|ref|YP_004221912.1| ribosomal protein S2 [Erodium carvifolium] gi|316926283|gb|ADU58136.1| ribosomal protein S2 [Erodium carvifolium] Length = 241 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 3/232 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERY--IFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +L+ +GV GH WNP+M + I + HI +L++T L +A ++ Sbjct: 7 NIRLEELVAAGVHLGHGIKKWNPRMAPFLFISPKSKGNHITNLTRTARFLAEACNLVFYA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +RG L + TK +A++ V+ AA ++ + VN KWLGGM+TNW T ++K RDL Sbjct: 67 ASRGKSFLIIGTKKEAANSVVRAAIKARCHYVNKKWLGGMLTNWSTTETMLRKFRDLRTQ 126 Query: 123 LNKENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 G K++ ++R+ L++ L G++ M GLPD++ VVD + A++E L Sbjct: 127 QKTGRLGCLPKRDAAILKRQLSHLQKHLGGVQYMTGLPDIVIVVDQQNQIKALRECITLG 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP + ++DT+ +PDLVD IP NDDS SI + + A G + S + Sbjct: 187 IPTIGLIDTDCDPDLVDLPIPANDDSVFSIRFILNKLVFAICKGRSSSTSSI 238 >gi|162945960|gb|ABY20990.1| Rps2 [Thujopsis dolabrata] Length = 231 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 88/224 (39%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++++ GV FGH WNPKM YI ER N+HI++L+ T L +A + D Sbjct: 7 NINLKEMVKVGVHFGHETRKWNPKMAPYILKERKNSHILNLTYTARFLSEACDFVFDGAK 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + + V TK Q +D AA + + VN KWL GM+TNW T ++K ++L + N Sbjct: 67 RGKQFMIVGTKHQTADAAKLAALAARCHYVNKKWLAGMLTNWFTTEARLEKFKNLTKQKN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 FTKKE ++R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILKRELNKLQEDLGGIRYMTKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP NDD I L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDGRGPIRLILNKLILAIRTGRA 230 >gi|189218379|ref|YP_001939020.1| ribosomal protein S2 [Methylacidiphilum infernorum V4] gi|189185237|gb|ACD82422.1| Ribosomal protein S2 [Methylacidiphilum infernorum V4] Length = 246 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 138/232 (59%), Gaps = 1/232 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + L++SG FGH+ WNPKM ++ + H+ID +T+ L+ A + Sbjct: 2 VELEDLIKSGTHFGHKKDRWNPKMAPFLLGLKGGIHLIDPKKTMDYLKGACDFLKKVSFE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 GG++LFV K QA V E A++S + VN +WLGG +TN T+ +SI +++ +++L N Sbjct: 62 GGKVLFVGCKRQAQRIVEEVARKSGSFYVNYRWLGGTLTNLVTIRKSIARMKWIDQLEEN 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + KKE + R+ KL R+LDGI+DM LP + V+D RE++A+ EA++L IPI Sbjct: 122 GTMERLPKKEVSKLRRENIKLHRSLDGIKDMEKLPSAIVVIDVVREEIAVSEAQKLNIPI 181 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 VA+VDTN NP+ +DY IP NDDS RSI + + +A I+G + + Sbjct: 182 VALVDTNGNPENIDYPIPANDDSIRSIRTILEEINAAIIEGKKEAGLSLPEE 233 >gi|18860300|ref|NP_569618.1| ribosomal protein S2 [Psilotum nudum] gi|25009141|sp|Q8WI27|RR2_PSINU RecName: Full=30S ribosomal protein S2, chloroplastic gi|18389453|dbj|BAB84205.1| ribosomal protein S2 [Psilotum nudum] Length = 239 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 81/223 (36%), Positives = 127/223 (56%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++L++GV FGH+ WNPKM +IF ER HI++L QT + +A ++ + + Sbjct: 7 NIELIEMLKAGVHFGHQTRKWNPKMAPHIFMERKGVHILNLIQTARFISEACDLVYNAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G + L V TK + + + AA ++ + VN KW+GGM+TNW T+ + +QKLR LE Sbjct: 67 EGKQFLLVGTKPRIAHLISSAAIKARCHYVNYKWIGGMLTNWSTIEKRLQKLRSLEIRKR 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +K+E + + KL + L GI M LPD++ +VD ++E AI+E L IP Sbjct: 127 MGGLDNLSKEEAAILRGQLSKLHKYLGGILYMKNLPDIVIIVDQHKELTAIRECMILDIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + VVDT+ +PDL + IP NDD+ SI + + A +G Sbjct: 187 TICVVDTDCDPDLTNIPIPANDDAQSSIRWILNQLTLAIREGR 229 >gi|254798681|ref|YP_003058331.1| ribosomal protein S2 [Parachlorella kessleri] gi|229915629|gb|ACQ90972.1| ribosomal protein S2 [Parachlorella kessleri] Length = 282 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 150/266 (56%), Gaps = 2/266 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ +++SG+ FGH WNP+M YI+ E+N H++DL QT +L++ L I ++ A Sbjct: 4 KLTLEDMIKSGMHFGHFTHEWNPRMAPYIYGEKNGRHVLDLVQTHYLLKQVLNFIEESAA 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G LFV TK QA+ + + A + VN +WLGGM+TNW+T+ +S++KL + + Sbjct: 64 QGKTFLFVGTKKQAAPLIAKTALACNSFYVNQRWLGGMLTNWRTIQKSLRKLDEYRQAEQ 123 Query: 125 KENQGFTKK-ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + F KK E +R++ +L++ L G+ +M LP ++ ++ E A++E R+L IP Sbjct: 124 RGDWNFLKKQEVARKKREKQRLEKYLAGLENMNQLPGVVIIIGQPEEIHAVRECRQLAIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR-QHSYMGADTKSAGE 242 + ++D+N +P L D+ IP NDDS ++ + DL ++ + G R + + TK + Sbjct: 184 TITLLDSNCDPTLADWYIPANDDSVSALRVILDLFENSILSGQTRYREDESFSKTKFLEK 243 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQ 268 + L + S+ + + Sbjct: 244 KIAKQNVKQSLHRKNSSTVTEKKASK 269 >gi|301353375|ref|YP_003795569.1| ribosomal protein S2 [Pteridium aquilinum subsp. aquilinum] gi|301016293|gb|ADK47580.1| ribosomal protein S2 [Pteridium aquilinum subsp. aquilinum] Length = 238 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 80/221 (36%), Positives = 120/221 (54%), Gaps = 1/221 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +G+ FGH+ WNP+M YIF +R HI+DL+QT + +A ++ D A G Sbjct: 13 MMAAGIHFGHQTQKWNPRMSPYIFTQRKGVHILDLTQTARLSSEACDLVFDAAAEGKESP 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQG 129 V TK Q +D V AA RS + VN KWLGG TNW T +++ + L+ + Sbjct: 73 TVGTKHQVADLVASAATRSQCHYVNEKWLGGTSTNWFTTETRLRRFQYLQTGEDTGGFDR 132 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K+E + ++ KLK+ L GI+ M PD+ + D + + +A++E L IP + VVD Sbjct: 133 LPKQEAATLRKQLFKLKKCLGGIQYMSDSPDIATIADQHEQSIALKECIILGIPTICVVD 192 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 T+ +PDLVD IPGNDD+ I D A +G + Sbjct: 193 TDCDPDLVDIPIPGNDDARSPIRRILDKPTLAICEGRSNSK 233 >gi|195928755|gb|ACG56057.1| ribosomal protein subunit 2 [Agalinis obtusifolia] gi|195928759|gb|ACG56059.1| ribosomal protein subunit 2 [Agalinis obtusifolia] Length = 218 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 121/218 (55%), Gaps = 1/218 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R H+ +L++T L + +I D + Sbjct: 1 NINLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGKHVTNLTRTARFLSEICDLIFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +A+D V AA ++ + VN KW GM+TNW +QKLRD E Sbjct: 61 SGKQFLIVGTPKKAADLVARAAIKARCHWVNKKWFRGMLTNWSITETRLQKLRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M LPD++ +VD ++E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTELPDIVIIVDQHKEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 181 TICLIDTNCDPDLADISIPSNDDARSSIRLILNKLVFA 218 >gi|108773335|ref|YP_635890.1| ribosomal protein S2 [Oltmannsiellopsis viridis] gi|122238314|sp|Q20EV5|RR2_OLTVI RecName: Full=30S ribosomal protein S2, chloroplastic gi|82541917|gb|ABB81958.1| ribosomal protein S2 [Oltmannsiellopsis viridis] Length = 238 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 84/237 (35%), Positives = 134/237 (56%), Gaps = 1/237 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I ++++ G+ FGH++ WNPKM +I+ ERN HIIDL QT L++ Q ++++ A Sbjct: 2 KVSIEEMVQVGMHFGHQSRKWNPKMAPFIYTERNGIHIIDLIQTHAYLKQVSQFLTESSA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV TK QAS + + A + VN +WLGGM+TNWKT+ SI+KL + + Sbjct: 62 AGKTILFVGTKKQASGLIAKVALQCNSPYVNQRWLGGMLTNWKTIQTSIKKLNEFDYQEK 121 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +K+E +++ +L++ L G++ M +PD++ +V E A+ E RRL I Sbjct: 122 TGGFDLLSKQEAAQARKEKARLQKYLGGMKHMTTIPDVVVIVGQPDELNAVAECRRLGIR 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 V ++DT+ +P L D +P NDDS SI L + ++G K+A Sbjct: 182 SVTILDTDCDPSLADLFVPANDDSVASIQLILTEFLRSILNGQQMFSEKQQRGKKTA 238 >gi|162945945|gb|ABY20980.1| Rps2 [Thuja sutchuenensis] gi|162945954|gb|ABY20986.1| Rps2 [Thuja standishii] Length = 231 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 89/224 (39%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++++ GV FGH WNPKM YIF ER ++HII+L+ T L +A + D Sbjct: 7 NINLKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLTYTARFLSEACDFVFDGAK 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + + V TK Q +D AA + + VN KW GM+TNW T ++K ++L + N Sbjct: 67 RGKQFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKFKNLMKQKN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 FTKKE + R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIRYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP NDDS I L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDDSRGPIRLILNKLILAIRTGKA 230 >gi|284044970|ref|YP_003395310.1| ribosomal protein S2 [Conexibacter woesei DSM 14684] gi|283949191|gb|ADB51935.1| ribosomal protein S2 [Conexibacter woesei DSM 14684] Length = 420 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 99/263 (37%), Positives = 147/263 (55%), Gaps = 1/263 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++LLE+GV FGH+ WNPKM R+I ER +IIDL +T +L +A + S RGG Sbjct: 10 LKELLENGVHFGHQTRRWNPKMRRFIHGERAGIYIIDLLKTQELLTEAQEFASAVAHRGG 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 +LFV TK QA D + E A+ + VN +WLGG++TN+ T++ I++L DLE + Sbjct: 70 TVLFVGTKKQARDGIKEVAEAAGMPYVNHRWLGGLLTNFGTITNRIRRLHDLERYEREGQ 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +ERL KL+ L G+++M +PD MFV+D E +A++EARRLRIPI+ Sbjct: 130 LDLLPTRERLAARADLLKLQANLGGVKNMARIPDAMFVIDLKVEAIAVKEARRLRIPIIG 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDTN +PD VD+VIPGNDD+ ++ + +G + K E Sbjct: 190 LVDTNCDPDEVDFVIPGNDDAMKACLTVTRALGRVIGEGREVFRAEEERQRKEQEEKARR 249 Query: 247 SKEGMQLEEDSQSSESSVLDGQE 269 E Q E + ++ D + Sbjct: 250 EAEERQKREAEERAKREAEDQAK 272 >gi|322382360|ref|ZP_08056267.1| 30S ribosomal protein S2-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153713|gb|EFX46088.1| 30S ribosomal protein S2-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 206 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 134/206 (65%), Gaps = 1/206 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M++YIF ERN +IIDL +TV +++A + G ILFV TK QA D V E A+R Sbjct: 1 MDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSLAEENGTILFVGTKKQAQDSVKEEAER 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKR 147 + +N +WLGG +TN++T+ + I +LR+LE++ + KKE + + +++D+L++ Sbjct: 61 CGMFYINQRWLGGTLTNFQTIQKRINRLRELEKMEEDGTFDLLPKKEVILLRKEKDRLEK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L GI+ M GLP +FV+D +E++A+ EAR+L IPIV +VDTN +PD +DYVIPGNDD+ Sbjct: 121 FLGGIKGMKGLPSALFVIDPRKERIAVAEARKLGIPIVGIVDTNCDPDEIDYVIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYM 233 R++ L +A A I+ + + Sbjct: 181 IRAVKLLTAKMADAVIESHQGEETTA 206 >gi|288928906|ref|ZP_06422752.1| ribosomal protein S2 [Prevotella sp. oral taxon 317 str. F0108] gi|288329890|gb|EFC68475.1| ribosomal protein S2 [Prevotella sp. oral taxon 317 str. F0108] Length = 290 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 95/268 (35%), Positives = 153/268 (57%), Gaps = 1/268 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 20 MSRTNFDQLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 79 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G RILFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 80 AKSGKRILFVATKKQAKDVVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKL 139 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L + R+R KL++ L I D+ LP +FVVD +E +A++EA+RL Sbjct: 140 MSDGTFANLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVVDVMKEAIAVKEAKRLG 199 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP+ A+VDTNSNP +D+VIP NDD+ SI + +A +G+ + + +A Sbjct: 200 IPVFAMVDTNSNPRDIDFVIPANDDAKDSIEVVLTACCAAIAEGLEERKVEKADEKAAAE 259 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + + + ++ +E+ V + + Sbjct: 260 QAEEAPRAPKKARKEEAKAETEVAEKTK 287 >gi|209573690|sp|Q2S6J0|RS2_SALRD RecName: Full=30S ribosomal protein S2 Length = 320 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 97/228 (42%), Positives = 139/228 (60%), Gaps = 1/228 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + TI +LL++G FGH WNP+ME+YIF ERNN HIIDL Q+ +L +A + Sbjct: 82 HRVTIEELLKAGAHFGHLTSRWNPRMEKYIFMERNNIHIIDLMQSQVLLDEAAEAAKRFA 141 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RG +ILF TK QA D V E A+ + +WLGG MTN++T+ +SI+++ ++E + Sbjct: 142 RRGKKILFAGTKKQAEDIVREHAEECGMPHMVDRWLGGTMTNFQTIRKSIRRMEEIERMD 201 Query: 124 -NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + KKE+L R+ +KL+ L GIRDM LP +++VD RE +A+ EA L I Sbjct: 202 RDGTLDKLKKKEKLMRLREHEKLEETLGGIRDMANLPSAIYIVDVQREDIAVSEANNLGI 261 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 PI+A+VDTN NP +DY IP NDD+ SI L + A +G+ + Sbjct: 262 PIIAMVDTNGNPKNIDYPIPVNDDALSSIELVTSTLTDAVQEGLQERR 309 >gi|165910453|gb|ABY73981.1| ribosomal protein S2 [Cuscuta gronovii] Length = 202 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 MLEARVHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQG 129 V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RD E Sbjct: 61 IVGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGGLNN 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE ++RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + ++D Sbjct: 121 IPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICLID 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSI 211 TN +P+L D IP NDD+ SI Sbjct: 181 TNCDPNLSDTAIPANDDAIASI 202 >gi|162945951|gb|ABY20984.1| Rps2 [Thuja koraiensis] Length = 231 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 89/224 (39%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++++ GV FGH WNPKM YIF ER ++HII+L T L +A + D Sbjct: 7 NINLKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLIYTARFLSEACDFVFDGAK 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + + V TK Q +D AA + + VN KW GM+TNW T ++K ++L + N Sbjct: 67 RGKQFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKFKNLMKQKN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 FTKKE + R+ +KL+ L GIR M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIRYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP ND+S SI L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDNSRGSIRLILNKLILAIRTGKA 230 >gi|156598491|gb|ABU85504.1| ribosomal protein S2 [Passiflora biflora] Length = 236 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++L +GV GH WNPKM YI HI DL++T L +A ++ + Sbjct: 7 NINLEEMLNAGVHLGHAIKKWNPKMAPYISGNLKGNHITDLTRTARFLSEACNLLFHAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 L V TK + +D V AA R+ + VN KW G++TNW T +QK RDL Sbjct: 67 SRNEFLIVCTKKKRADLVARAAIRARCHYVNKKWRAGILTNWSTTQTRLQKFRDLTMYQK 126 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ + ++ +L++ L GI+ M LPD++ ++D ++ A++E + IP Sbjct: 127 TGKLTRLPKRDVSRLNKQLSRLEKYLGGIKYMTRLPDIVIILDQQKDYTALRECITMGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDTN +PDL D +IP NDD++ S + + A G + Sbjct: 187 TICLVDTNCDPDLADLLIPANDDNTVSFRFILNKLVFAICKGRS 230 >gi|162945948|gb|ABY20982.1| Rps2 [Thuja occidentalis] Length = 231 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 88/224 (39%), Positives = 127/224 (56%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++++++ GV FGH WNPKM YIF ER ++HII+L T L +A + D Sbjct: 7 NINLKEMVKVGVHFGHETRKWNPKMAPYIFKERKDSHIINLIYTARFLSEACDFVFDGAK 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RG + + V TK Q +D AA + + VN KW GM+TNW T ++K ++L + N Sbjct: 67 RGKQFMIVGTKHQTADAAKLAALAARCHYVNKKWFAGMLTNWFTTEVRLEKFKNLMKQKN 126 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 FTKKE + R+ +KL+ L GI+ M LPD++ ++D E AI+E R L IP Sbjct: 127 TGGFDKFTKKEAAILNRELNKLQEDLGGIKYMKKLPDIVIILDQKGEYTAIRECRTLGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + +VDT+ +PDLVD IP ND+S SI L + + A G A Sbjct: 187 TICLVDTDCDPDLVDIPIPANDNSRGSIRLILNKLILAIRTGKA 230 >gi|294505849|ref|YP_003569907.1| 30S ribosomal protein S2 [Salinibacter ruber M8] gi|294342177|emb|CBH22955.1| 30S ribosomal protein S2 [Salinibacter ruber M8] Length = 320 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 97/228 (42%), Positives = 139/228 (60%), Gaps = 1/228 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + TI +LL++G FGH WNP+ME+YIF ERNN HIIDL Q+ +L +A + Sbjct: 82 HRVTIEELLKAGAHFGHLTSRWNPRMEKYIFMERNNIHIIDLMQSQVLLDEAAEAAKRFA 141 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RG +ILF TK QA D V E A+ + +WLGG MTN++T+ +SI+++ ++E + Sbjct: 142 RRGKKILFAGTKKQAEDIVREHAEECGMPHMVDRWLGGTMTNFQTIRKSIRRMEEIERMD 201 Query: 124 -NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + KKE+L R+ +KL+ L GIRDM LP +++VD RE +A+ EA L I Sbjct: 202 RDGTLDKLKKKEKLMRLREHEKLEETLGGIRDMANLPSAIYIVDVQREDIAVSEANNLGI 261 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 PI+A+VDTN NP +DY IP NDD+ SI L + A +G+ + Sbjct: 262 PIIAMVDTNGNPKNIDYPIPVNDDALSSIELVTSTLTDAVQEGLQERR 309 >gi|327404460|ref|YP_004345298.1| 30S ribosomal protein S2P [Fluviicola taffensis DSM 16823] gi|327319968|gb|AEA44460.1| SSU ribosomal protein S2P [Fluviicola taffensis DSM 16823] Length = 256 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 94/255 (36%), Positives = 146/255 (57%), Gaps = 5/255 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+GV FGH WNP M YIF E+ HIIDL++T+ L +A + Sbjct: 1 MSKVNFDSLLEAGVHFGHLKRKWNPAMAPYIFDEKKGIHIIDLNKTIAHLDQACAAMKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G ++LFVATK QA + + + V +W GGM+TN++T +SI+K+ ++++ Sbjct: 61 AKSGKKVLFVATKKQAKEIITDRVAPINMPYVTERWSGGMLTNFQTTRKSIRKMVSIDKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + K+ERL R+RDKL++ I DM P +F+VD +E +A+ EA+RL Sbjct: 121 KTDGTWETLNKRERLFKTRQRDKLEKTFGSIADMTRQPAAIFIVDILKEHIALAEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT---- 237 IP A+VDTNS+P LVD+ IP NDD+++SIA+ D + + +G+ + + D Sbjct: 181 IPTFAMVDTNSDPRLVDFPIPANDDATKSIAIILDAICGSIKEGLDDRKTTATKDKDEAP 240 Query: 238 KSAGETVVHSKEGMQ 252 +A E VV E + Sbjct: 241 AAATEEVVAKVEETK 255 >gi|195942734|ref|ZP_03088116.1| 30S ribosomal protein S2 [Borrelia burgdorferi 80a] Length = 212 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++ +KKE + R++ KL + L GI+DM LP +F++D RE++AI EAR+L+ Sbjct: 121 EVDGTFDMISKKEISQLNREKSKLAKNLTGIKDMETLPGAIFIIDPKREQIAINEARKLK 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIAL 213 IPI++VVDTN NPD++D IPGNDD+ RS+AL Sbjct: 181 IPIISVVDTNCNPDVIDCPIPGNDDAIRSVAL 212 >gi|165910457|gb|ABY73983.1| ribosomal protein S2 [Cuscuta cephalanthi] Length = 202 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 1/202 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 MLEARVHLGHSTRNWNPKMSPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQG 129 V T + A + V A+K++ + VN KWLGGM+TNW T +QK RD E Sbjct: 61 IVGTNNAADEAVARASKKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGGLNN 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE +RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + ++D Sbjct: 121 IPKKEATMFKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICLID 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSI 211 TN +P+L D IP NDD+ SI Sbjct: 181 TNCDPNLSDIAIPANDDAIASI 202 >gi|165910455|gb|ABY73982.1| ribosomal protein S2 [Cuscuta rostrata] Length = 204 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 V GH WNPKM YI R HI +L++T L +A ++ +RG L V T Sbjct: 1 RVHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 + A + V A+KR+ + VN KWLGGM+TNW T +QK RD E KK Sbjct: 61 NNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGGLNNIPKK 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 E ++RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + ++DTN + Sbjct: 121 EATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ SI + + Sbjct: 181 PNLSDIAIPANDDAIASIRIILNK 204 >gi|149202589|ref|ZP_01879561.1| 30S ribosomal protein S2 [Roseovarius sp. TM1035] gi|149143871|gb|EDM31905.1| 30S ribosomal protein S2 [Roseovarius sp. TM1035] Length = 226 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 117/234 (50%), Positives = 168/234 (71%), Gaps = 8/234 (3%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVP+L AL I +TVA+ GRILFV TK QA+ + EAA++ Sbjct: 1 MGEFIYGARNGIHIMDLTQTVPLLDAALHAIRETVAKNGRILFVGTKRQAAQPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 AQY +N +WLGG +TNW+TVS+SIQ+L+ ++E++ +G TKKERL IER + KL+ + Sbjct: 61 CAQYYMNHRWLGGTLTNWQTVSKSIQRLKQIDEMMEHGAEGLTKKERLGIERDQIKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG+PD++FV+D +E LA+ EA +L IP+V +VDTN +P +DY+IPGNDD++ Sbjct: 121 LGGIREMGGVPDMLFVIDVKKEALAVAEANKLGIPVVGIVDTNCSPAGIDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSES 262 R+IAL+CDLV+ AA+DG++ Q G D + E + +EE +ES Sbjct: 181 RAIALYCDLVSRAALDGMSAQLGAAGVDMGAL--------ENLPVEEALAEAES 226 >gi|224831976|gb|ACN67054.1| ribosomal protein subunit 2 [Mazus pumilus] Length = 195 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 79/195 (40%), Positives = 115/195 (58%), Gaps = 1/195 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSS 208 PDL D IP NDD+ Sbjct: 181 PDLADISIPANDDAI 195 >gi|224831984|gb|ACN67058.1| ribosomal protein subunit 2 [Mimulus tenellus var. tenellus] gi|224831986|gb|ACN67059.1| ribosomal protein subunit 2 [Mimulus szechuanensis] Length = 194 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 116/194 (59%), Gaps = 1/194 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HII+L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 E ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 EAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDS 207 PDL D IP NDD+ Sbjct: 181 PDLADISIPANDDA 194 >gi|281355894|ref|ZP_06242387.1| ribosomal protein S2 [Victivallis vadensis ATCC BAA-548] gi|281317263|gb|EFB01284.1| ribosomal protein S2 [Victivallis vadensis ATCC BAA-548] Length = 281 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 146/262 (55%), Gaps = 1/262 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +I LLE+G FGH+ WNPKM+ Y++ +N IIDL++T+ + A + T Sbjct: 1 MAKISINDLLEAGCHFGHQTRRWNPKMKDYVYGAKNGISIIDLTKTMYQIAAACNFLQRT 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 VA GG ILFV TK Q + V E A + YCV+ +WLGG +TN T+ +SI K+ +++ Sbjct: 61 VANGGEILFVGTKRQLREIVKELADTTGMYCVSERWLGGTLTNNVTIRKSITKMAEIDGT 120 Query: 123 LNKENQG-FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 LN + KKE + R+ +KL R LDGI M LP + V+D E A++EA +L Sbjct: 121 LNSDAAKSMKKKEIAGLSRRAEKLHRDLDGIAGMKRLPAALVVIDVYNEINAVREANKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IPIVA+VDTN +P LVDY + NDD+ +S+ + +L A A + + +A Sbjct: 181 IPIVAIVDTNGDPSLVDYPVAANDDAVKSVQIITNLFAEAIKVAREIYRKKVTEERDAAE 240 Query: 242 ETVVHSKEGMQLEEDSQSSESS 263 ++E E + ++ Sbjct: 241 AAKKVAQEKADDAEKEEKADKP 262 >gi|195928761|gb|ACG56060.1| ribosomal protein subunit 2 [Agalinis obtusifolia] Length = 217 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 1/216 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R H+ +L++T L + +I D + Sbjct: 1 NINLEEMLEAGVHFGHGTKKWNPKMAPYISAKRKGKHVTNLTRTARFLSEICDLIFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V T +A+D V AA ++ + VN KW GM+TNW +QKLRD E Sbjct: 61 SGKQFLIVGTPKKAADLVARAAIKARCHWVNKKWFRGMLTNWSITETRLQKLRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M LPD++ +VD ++E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTELPDIVIIVDQHKEYTALRECITLGIP 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 181 TICLIDTNCDPDLADISIPSNDDARSSIRLILNKLV 216 >gi|171910277|ref|ZP_02925747.1| ribosomal protein S2 [Verrucomicrobium spinosum DSM 4136] Length = 249 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 95/222 (42%), Positives = 140/222 (63%), Gaps = 1/222 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +L+E+GV FGH+ WNPKM+ ++ RN HII++ +T+ + A ++D +G Sbjct: 25 LAELVEAGVHFGHQTRRWNPKMKGFLLEARNGIHIINIEKTLEQAEVAANFLADLTRKGK 84 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KE 126 RILFV K QA + V EAA Q+ VN +WLGG +TN T+ +S+ + + LE+L E Sbjct: 85 RILFVGCKRQAQEAVQEAATAVGQFYVNHRWLGGTLTNQATIRKSVARWQYLEDLPKLPE 144 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKE + R++ KL+R L GIR M GLPD M +VD+ RE +A+ EA RLRIPIVA Sbjct: 145 FKAMSKKEIAALNREKAKLERNLKGIRYMDGLPDAMVIVDSAREHIAVHEATRLRIPIVA 204 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +VD+N++P+ VDY I NDD+ RSI + + + A Sbjct: 205 LVDSNADPNAVDYPIAANDDAIRSIRIILQKLIDPILMAQAE 246 >gi|2734673|gb|AAC73011.1| ribosomal protein subunit 2 [Kigelia africana] Length = 204 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 121/204 (59%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVYFGHDTRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + +QK RDL + K+ Sbjct: 61 KNKAADSVARAAIKARCHCVNKKWLGGMLTNWSTTERRLQKFRDLRMEQKRGRLNRLQKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAAMKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYKALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL + IP NDD+ SI L + Sbjct: 181 PDLANISIPANDDAISSIRLILNK 204 >gi|332519127|ref|ZP_08395594.1| ribosomal protein S2 [Lacinutrix algicola 5H-3-7-4] gi|332044975|gb|EGI81168.1| ribosomal protein S2 [Lacinutrix algicola 5H-3-7-4] Length = 257 Score = 268 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 97/255 (38%), Positives = 147/255 (57%), Gaps = 1/255 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++LLE+GV FGH W+P M Y++ ERN HII+L +T + +A + ++ A Sbjct: 3 VEVKELLEAGVHFGHLTRKWDPNMAPYVYMERNGIHIINLYKTAAKIDEAGEALAKIAAS 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LN 124 G +ILFVATK QA D V E A + +W GGM+TN+ T+ ++I+K+ ++ + + Sbjct: 63 GRKILFVATKKQAKDIVAEKAGSINMPYITERWPGGMLTNFVTIRKAIKKMATIDRMKKD 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +KKERL ++R R KL++ L I DM LP +FVVD RE +AI+EA++L IPI Sbjct: 123 GTFLTLSKKERLQVDRLRAKLEKNLGSIVDMTRLPGALFVVDIKREHIAIKEAQKLNIPI 182 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 A+VDTNS+P VDYVIP NDD+S+SI V A G+ + + + E Sbjct: 183 FAMVDTNSDPRQVDYVIPANDDASKSIDKILTHVTEAITGGLNERKAEKAEKAEGKAEKK 242 Query: 245 VHSKEGMQLEEDSQS 259 + ++ + Sbjct: 243 AAPAKKATAVKEEEE 257 >gi|165910487|gb|ABY73998.1| ribosomal protein S2 [Jacquemontia tamnifolia] Length = 202 Score = 268 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++++GV FGH WNPKM YI +R HI +L +T L +A ++ D RG + L Sbjct: 1 MMKAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLIRTARFLSEACDLVFDAAKRGKQFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQG 129 V TK +A+D V A+ ++ + VN KWLGGM+TNW T ++K RDL Sbjct: 61 IVGTKKKAADSVARASIKARCHYVNKKWLGGMLTNWSTTEMRLEKFRDLRMKQKMGGFNR 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K++ ++R+ +L+ + GI+ M GLPD++ ++D ++E A++E L IP + ++D Sbjct: 121 LPKRDATMLKRQLARLQTYVGGIKYMTGLPDIVIIIDQHKEYTALRECITLGIPTICLID 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSI 211 TN +P+L D IP NDD+ SI Sbjct: 181 TNCDPNLSDISIPANDDAISSI 202 >gi|224831978|gb|ACN67055.1| ribosomal protein subunit 2 [Mazus gracilis] gi|224831980|gb|ACN67056.1| ribosomal protein subunit 2 [Mazus spicatus] Length = 194 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 115/194 (59%), Gaps = 1/194 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDS 207 PDL D IP NDD+ Sbjct: 181 PDLADISIPANDDA 194 >gi|312892393|ref|ZP_07751888.1| SSU ribosomal protein S2P [Mucilaginibacter paludis DSM 18603] gi|311295177|gb|EFQ72351.1| SSU ribosomal protein S2P [Mucilaginibacter paludis DSM 18603] Length = 276 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 156/259 (60%), Gaps = 1/259 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + T + LL++GV FGH W+PKM +YIF ERN HIIDL++T+ +++A I Sbjct: 1 MARTTYQDLLDAGVHFGHLTRKWDPKMSQYIFMERNGIHIIDLNKTLTKVEEAAAAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G ++LFVATK QA D V + AK V +WLGGM+TN+ TV +SI+K+ ++++L Sbjct: 61 VKSGRKVLFVATKKQAKDIVADYAKGVNMPYVTERWLGGMLTNFATVRKSIKKMSNIDKL 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +KKERL I+R+R KL+ L GI D+ LP +F++D +E +A+ EA +L Sbjct: 121 TKDGTYSNLSKKERLMIQRERIKLESLLGGIADLNRLPAALFLIDVKKEHIAVAEAMKLN 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 IP A+VDTNS+P +D+ IP NDD+++SI+L ++ A +G+ + + + Sbjct: 181 IPTFAMVDTNSDPSNIDFPIPANDDATKSISLIASIIIKAIEEGLDERKREKEDEAEKEA 240 Query: 242 ETVVHSKEGMQLEEDSQSS 260 + ++ ++ Sbjct: 241 AASKAKADSPEVAAGAKDD 259 >gi|197131516|gb|ACH47276.1| ribosomal protein S2 [Geranium macrorrhizum] Length = 245 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 3/228 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDT 62 +LL +GV FGHR WNP+M YI + THI +L++T L +A ++ Sbjct: 7 NIRFEELLAAGVHFGHRIKKWNPRMAPYILISPKSKGTHITNLTRTAHFLAEACHLVFYA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G L + TK A++ V+ AA ++ + VN KWL GM+TNW T ++K RDL Sbjct: 67 ASTGKSFLIIGTKKAAANYVVRAAIKARCHYVNKKWLAGMLTNWATTETRLRKFRDLRAA 126 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 K++ ++R+ L++ L G++ M GLPD++ +V + E A++E L Sbjct: 127 QKTGRLSRLPKRDAAILKRQLAHLQKYLGGVQYMTGLPDIVIIVGQHHEFTALRECITLG 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + ++DT+ +PDLVD IP NDDS RSI + + A +G + Sbjct: 187 IPTIGLIDTDCDPDLVDLPIPANDDSRRSIRFILNKLVLAICEGRSSS 234 >gi|2734657|gb|AAB93681.1| ribosomal protein subunit 2 [Castilleja linariifolia] Length = 204 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 116/200 (58%), Gaps = 1/200 (0%) Query: 19 GHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQA 78 GH WNPKM YI +R HI +L++T L +A ++ D + G + L V TK++A Sbjct: 5 GHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASSGKQFLIVGTKNKA 64 Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLN 137 +D V AA ++ +CVN KWLGG++TNW T +QK RD E K++ Sbjct: 65 ADLVAWAAIKARCHCVNKKWLGGILTNWSTTETRLQKFRDLRMEQKTGRLNRLPKRDAAV 124 Query: 138 IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLV 197 ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 125 VKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDLA 184 Query: 198 DYVIPGNDDSSRSIALFCDL 217 D IP NDD+ SI L + Sbjct: 185 DISIPANDDAISSIRLILNK 204 >gi|317134111|ref|YP_004123443.1| ribosomal protein S2 [Rhizanthella gardneri] gi|255985042|gb|ACU46589.1| ribosomal protein S2 [Rhizanthella gardneri] Length = 258 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 1/225 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI + HI +L+ T L +A ++ + + Sbjct: 8 NIHLEEMMEAGVHFGHGTKKWNPRMAPYISAKHKGIHITNLTITARFLSEACNLVFEAAS 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++ +D V AA R+ VN KW GGM+TNW T + KLR+ + E Sbjct: 68 HGKKFLIVGTKNKTADLVASAAIRARCNYVNKKWPGGMLTNWSTTETRLHKLRNLIAEQK 127 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + Q TK + + + RK L+ L GI+ M LPD++ +VD ++ ++E L IP Sbjct: 128 MGKLQRLTKGKAVMLNRKLSILQTYLVGIQYMARLPDIVIIVDQQKDYKVLKECAILGIP 187 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 + ++DTN +PD D IP NDD+ SI L + SA GI + Sbjct: 188 TICLIDTNCDPDCADISIPANDDAITSIQLILTKLVSAIYKGIKK 232 >gi|260910527|ref|ZP_05917195.1| 30S ribosomal protein S2 [Prevotella sp. oral taxon 472 str. F0295] gi|260635369|gb|EEX53391.1| 30S ribosomal protein S2 [Prevotella sp. oral taxon 472 str. F0295] Length = 271 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 1/229 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 1 MSRTNFDQLLQAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G RILFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKRILFVATKKQAKDVVAEKASSVNMPYVIERWPGGMLTNFPTIRKAVKKMANIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L + R+R KL++ L I D+ LP +FVVD +E +A++EA+RL Sbjct: 121 MNDGTFANLSKRELLQVTRQRAKLEKNLGSIADLTRLPSALFVVDVMKEAIAVKEAKRLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP+ A+VDTNS+P +D++IP NDD+ SI + +A +G+ + Sbjct: 181 IPVFAMVDTNSDPRDIDFIIPANDDAKDSIEVVLTACCAAIAEGLEERK 229 >gi|170768499|ref|ZP_02902952.1| ribosomal protein S2 [Escherichia albertii TW07627] gi|170122603|gb|EDS91534.1| ribosomal protein S2 [Escherichia albertii TW07627] Length = 215 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 1/215 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ +IF RN HII+L +TVPM +AL ++ +R G+ILFV TK AS+ V +AA Sbjct: 1 MKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKR 147 Q+ VN +WLGGM+TNWKTV QSI++L+DLE + TKKE L R+ +KL+ Sbjct: 61 CDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLEN 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ Sbjct: 121 SLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 R++ L+ VA+ +G ++ + ++ E Sbjct: 181 IRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE 215 >gi|165910463|gb|ABY73986.1| ribosomal protein S2 [Cuscuta veatchii] Length = 202 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI +R HI +L++T L +A ++ ++G + L Sbjct: 1 MLEARVHLGHSTRNWNPKMAPYISEKRKGIHITNLTRTARFLSEACDLVFYAASKGKKFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQG 129 V T + A + V A+K++ + VN KWLGGM+TNW T + K RDL+ E Sbjct: 61 IVGTNNAADEAVARASKKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLKMEQKRGGLNN 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE ++RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP + + D Sbjct: 121 LPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRTLGIPTICLTD 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSI 211 TN +P+L D IP NDD+ SI Sbjct: 181 TNCDPNLSDIAIPANDDAIASI 202 >gi|2734697|gb|AAB93700.1| ribosomal protein subunit 2 [Striga gesnerioides] Length = 204 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 116/204 (56%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 G FGH WNPKM YI +R HI +L +T L +A ++ +R + L V T Sbjct: 1 GFHFGHNIRKWNPKMAPYISGKRKGNHITNLIRTARFLSEACNLVFYAASRRKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 + + +D V AA ++ + VN KWLGGM+TNW T + KLRDL+ E K+ Sbjct: 61 QKKEADSVARAAIKARCHFVNKKWLGGMLTNWSTTETRLHKLRDLKIEQRAGRLSRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M LPD++ ++D ++E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTRLPDVVIILDQHKEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D+ IP NDDS +I L + Sbjct: 181 PDLADFSIPANDDSRSAIRLILNK 204 >gi|309322261|ref|YP_003934339.1| ribosomal protein S2 [Monsonia speciosa] gi|197131520|gb|ACH47278.1| ribosomal protein S2 [Monsonia speciosa] gi|300069354|gb|ADJ66474.1| ribosomal protein S2 [Monsonia speciosa] Length = 240 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 5/230 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIF----CERNNTHIIDLSQTVPMLQKALQVIS 60 + +LL + V GHR WNP+M Y+ R + HI +L++T L +A ++ Sbjct: 7 NIKLEELLRARVHLGHRIKKWNPRMAPYVSISKTKRRKDRHITNLTRTARFLAEACDLVF 66 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-L 119 ++G R L V T ++ V+ AA ++ + VN KWLGGM+TNW T +++LRD Sbjct: 67 YAASKGSRFLIVGTTKNVANSVVRAAIKARCHYVNKKWLGGMLTNWSTTEMKLRQLRDLR 126 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 K++ +R+ +L++ L G++ M GLPD++ VV+ A++E Sbjct: 127 RAQKTGGFDRLRKRDAAISKRQLKQLQKYLGGVQYMTGLPDIVIVVEQQPAVTALRECIT 186 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 L IP + ++DT+ +PDLVD IP NDDS SI L + + A +G + Sbjct: 187 LGIPTICLIDTDCDPDLVDLPIPANDDSISSIRLILNKLVFAICEGRSSS 236 >gi|224831974|gb|ACN67053.1| ribosomal protein subunit 2 [Lancea tibetica] Length = 194 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 115/194 (59%), Gaps = 1/194 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDS 207 PDL D IP NDD+ Sbjct: 181 PDLADISIPANDDA 194 >gi|10179724|gb|AAG13854.1| ribosomal protein subunit 2 [Collinsia grandiflora] Length = 201 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 2/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPK YI +R HI +L++T +L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPK-APYISAKRKGIHITNLTRTARVLSEACBLVFDAASRGKQFLIVGT 59 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 60 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 119 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 120 DAAMVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 179 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 180 PDLADISIPANDDAISSIRLIL 201 >gi|115531903|ref|YP_784059.1| ribosomal protein S2 [Pelargonium x hortorum] gi|122164291|sp|Q06FX2|RR2_PELHO RecName: Full=30S ribosomal protein S2, chloroplastic gi|112382057|gb|ABI17250.1| ribosomal protein S2 [Pelargonium x hortorum] Length = 246 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 127/225 (56%), Gaps = 1/225 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ + V GH NP+M YI + +T I +L +T L + ++ + + Sbjct: 7 NIRLEDMVAARVHLGHDIKKRNPRMAPYISAKLKDTDITNLKKTARFLSETCDLVFEAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G + L V TK + ++ V +AA+ + + VN KWLGGM+TNW T + + K RDL Sbjct: 67 KGKKFLIVGTKKEVANSVAQAARTAGCHYVNQKWLGGMLTNWSTTKKRLHKFRDLIRQQG 126 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + N+ K++ ++R+ L+++L G++ M LPD++ ++D + E A++E LRIP Sbjct: 127 RLNR-LPKRDAAILKRQLFHLQKSLGGVKYMKELPDIVIILDQHGEFTALRECISLRIPT 185 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DTN +PDLVD IP NDDS SI + + A G +R+ Sbjct: 186 IGLIDTNCDPDLVDLPIPANDDSIPSIRFILNKLILAICKGRSRR 230 >gi|224831988|gb|ACN67060.1| ribosomal protein subunit 2 [Phryma leptostachya var. asiatica] Length = 194 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 78/194 (40%), Positives = 115/194 (59%), Gaps = 1/194 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDS 207 PDL D IP NDD+ Sbjct: 181 PDLADISIPANDDA 194 >gi|6650126|gb|AAF21731.1|AF055143_1 ribosomal protein subunit 2 [Orobanche fasciculata] Length = 202 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 122/202 (60%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI++L++T L +A ++ D+ RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHIMNLTRTARCLSEACNLVFDSAGRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + + K R+ E + K+ Sbjct: 61 KNKAADLVAGAAIKARCHCVNKKWLGGMLTNWSTTEKRLHKFRNLRMEQKKGKINLLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L G++ M GLPD++ +VD + E +A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGMKYMTGLPDIVIIVDQHEEYMALRECITLVIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ S+ L Sbjct: 181 PDLADISIPANDDAISSLRLIL 202 >gi|84684968|ref|ZP_01012868.1| 30S ribosomal protein S2 [Maritimibacter alkaliphilus HTCC2654] gi|84667303|gb|EAQ13773.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2654] Length = 228 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 123/211 (58%), Positives = 161/211 (76%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ ERN HI DL+QTVPML AL VI +TVA+ GRILFV TK QAS + EAA++ Sbjct: 1 MGEFIYGERNGIHIFDLTQTVPMLDAALNVIRETVAKNGRILFVGTKRQASKPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 SAQY +N +WLGG +TNW+TVSQSI +L+ +E L +G TKKERL +ER ++KL + Sbjct: 61 SAQYYMNHRWLGGTLTNWQTVSQSINRLKAYDEQLAAGAEGLTKKERLGMERDQEKLTLS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GIR+MGG PDL+FV+D N+E LAI+EA +L IP+VAVVD+N +PD VDY+IPGNDD++ Sbjct: 121 LGGIREMGGRPDLLFVIDVNKEDLAIKEANKLGIPVVAVVDSNCSPDGVDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKS 239 R+IAL+CDL A AA+DG++ Q G D + Sbjct: 181 RAIALYCDLAARAALDGMSGQLEAAGIDVGA 211 >gi|2734653|gb|AAB93679.1| ribosomal protein subunit 2 [Boschniakia strobilacea] Length = 204 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WN KM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVPFGHVTRKWNTKMAPYISAKRKGIHITNLTRTARFLSEACGLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + KLR+ E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRELRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAMVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP NDD+ SI L + Sbjct: 181 PDLADISIPANDDAISSIRLILNK 204 >gi|224831962|gb|ACN67047.1| ribosomal protein subunit 2 [Rehmannia piasezkii] gi|224831964|gb|ACN67048.1| ribosomal protein subunit 2 [Rehmannia henryi] gi|224831966|gb|ACN67049.1| ribosomal protein subunit 2 [Rehmannia solanifolia] gi|224831968|gb|ACN67050.1| ribosomal protein subunit 2 [Rehmannia chingii] gi|224831970|gb|ACN67051.1| ribosomal protein subunit 2 [Rehmannia glutinosa] Length = 194 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 116/194 (59%), Gaps = 1/194 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D+ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDSASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDS 207 PDL D IP NDD+ Sbjct: 181 PDLADISIPANDDA 194 >gi|165910461|gb|ABY73985.1| ribosomal protein S2 [Cuscuta compacta] Length = 201 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 115/201 (57%), Gaps = 1/201 (0%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 LEARVHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFSAASRGKTFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGF 130 V T + A + V A+KR+ + VN KWLGGM+TNW T +QK RD E Sbjct: 61 VGTNNAADEAVARASKRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGGLNNI 120 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 KKE +RK L++ L GI+ M GLPD++ ++D ++E A+QE R L IP ++++DT Sbjct: 121 PKKEATIFKRKLAHLQKYLGGIQYMTGLPDIVIIIDQHKEYTALQECRALGIPTISLIDT 180 Query: 191 NSNPDLVDYVIPGNDDSSRSI 211 N +P+L D IP NDD+ SI Sbjct: 181 NCDPNLSDIAIPANDDAIASI 201 >gi|29839814|ref|NP_828920.1| 30S ribosomal protein S2 [Chlamydophila caviae GPIC] gi|33301546|sp|Q824U3|RS2_CHLCV RecName: Full=30S ribosomal protein S2 gi|29834161|gb|AAP04798.1| ribosomal protein S2 [Chlamydophila caviae GPIC] Length = 276 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 152/259 (58%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +++ L+E+G FGH+ WNPKM+ YIF E+N +II+L++T+ L+ AL + Sbjct: 6 LCTLSVKDLMEAGAHFGHQTRRWNPKMKLYIFEEKNGLYIINLAKTLYQLRNALPHVCKV 65 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ILFV TK QA + EAA + +Y V +WLGGM+TN T+ SI+ L +E+ Sbjct: 66 IKENKPILFVGTKKQAKCVIKEAAIEAGEYFVAERWLGGMLTNMATIRNSIKTLDKIEKD 125 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L + + TKKE + ++ KL + L+GIR + +P L+ VVD + EK+A+ EA++L I Sbjct: 126 LTQNSSCLTKKEIALLAKRHQKLLKNLEGIRYLRKIPGLVIVVDPSYEKIAVAEAKKLGI 185 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P++A+VDTN +P +DYV+P NDDS +SI L + I+ + + + K+ Sbjct: 186 PVLALVDTNCDPTPIDYVVPCNDDSLKSIRLIISAIKDNIINTKKKLGVEIVSPIKTLST 245 Query: 243 TVVHSKEGMQLEEDSQSSE 261 + + +D++ + Sbjct: 246 EDGSEEIDIAAGDDNRKED 264 >gi|256819562|ref|YP_003140841.1| 30S ribosomal protein S2 [Capnocytophaga ochracea DSM 7271] gi|256581145|gb|ACU92280.1| ribosomal protein S2 [Capnocytophaga ochracea DSM 7271] Length = 241 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 94/242 (38%), Positives = 152/242 (62%), Gaps = 2/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA I+ LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NNIEIKDLLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIVASGKKVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA++ Sbjct: 120 KMKKDGTFDTLSKREKLHVERMREKLEKNLGSIADMSRLPGALFVVDTLREHIAVREAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VD+ IP NDD+S++I + A +G++ + + + ++ Sbjct: 180 LNIPIFAMVDTNSDPREVDFAIPANDDASKAIEKVLSYITEAVNEGLSGRTADANKEAEA 239 Query: 240 AG 241 A Sbjct: 240 AE 241 >gi|2734683|gb|AAB93693.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 204 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVHLGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K + ++ V AAK++ +CVN KWLGG +TNW T + + RDL E + K+ Sbjct: 61 KKKTANSVACAAKKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 PDL D IP N++S SI L + Sbjct: 181 PDLADLPIPANNNSIFSIRLILNK 204 >gi|6650140|gb|AAF21738.1|AF055150_1 ribosomal protein subunit 2 [Schwalbea americana] Length = 202 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVHLGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFHAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 +A+ V AA ++ +CVN KW GGM+TNW + ++K RD E KK Sbjct: 61 TKKAAGSVAWAAIKARCHCVNQKWFGGMLTNWSNTERRLRKFRDLRMEQKTGRLNRLPKK 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + + R+ +L+ L GI+ M G+PD++ +VD E A++E IP + ++DTN + Sbjct: 121 DAAVVTRQLSRLQTYLGGIKYMPGVPDIVIIVDRYEEYTALRECITFGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI Sbjct: 181 PDLADLPIPANDDAISSIHFIL 202 >gi|165910459|gb|ABY73984.1| ribosomal protein S2 [Cuscuta glomerata] Length = 201 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +LE+ V GH WNPKM YI R HI +L++T L +A ++ +RG L Sbjct: 1 MLEARVHLGHSTRNWNPKMAPYISATRKGIHITNLTRTARFLSEACDLVFYAASRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQG 129 V T + A + V A+KR+ + VN KWL GM+TNW T +QK RDL E Sbjct: 61 IVGTNNAADEAVARASKRARCHYVNKKWLAGMLTNWSTTETRLQKFRDLRIEQKTGGLNN 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KKE ++RK +L++ L GI+ M GLPD++ ++D N+E A+QE R L IP + ++D Sbjct: 121 IPKKEATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQNKEYTALQECRALGIPTICLID 180 Query: 190 TNSNPDLVDYVIPGNDDSSRS 210 TN +P+L D IP NDD+ S Sbjct: 181 TNCDPNLSDIAIPANDDAIAS 201 >gi|171777594|ref|ZP_02919282.1| hypothetical protein STRINF_00117 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283203|gb|EDT48627.1| hypothetical protein STRINF_00117 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 228 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 146/228 (64%), Gaps = 1/228 (0%) Query: 30 ERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS 89 +YIF ERN H+IDL QTV M A + + D A ILFV TK QA+D V E A+R+ Sbjct: 1 AKYIFTERNGIHVIDLQQTVKMADTAYEFVRDAAANDAVILFVGTKKQAADAVKEEAERA 60 Query: 90 AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKRA 148 QY +N +WLGG +TNW T+ + I +L++++ + + + KKE + ++R +L++ Sbjct: 61 GQYYINHRWLGGTLTNWDTIQKRIARLKEIKRMEEDGTFEVLPKKEVALLNKQRARLEKF 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GI DM +PD+M++VD ++E++AI+EA++L IP+VA+VDTN++PD +D +IP NDD+ Sbjct: 121 LGGIEDMPRIPDVMYIVDPHKEQIAIKEAKKLGIPVVAMVDTNADPDDIDVIIPANDDAI 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEED 256 R++ L +A A I+G + + ++ +++ E ++ + + Sbjct: 181 RAVKLITSKLADAVIEGRQGEAADADFQAEAKADSIEEIVEVVEGDNE 228 >gi|329296137|ref|ZP_08253473.1| 30S ribosomal protein S2 [Plautia stali symbiont] Length = 213 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 100/201 (49%), Positives = 140/201 (69%), Gaps = 1/201 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ +IF RN HII+L +TVPM +AL ++ +R G+ILFV TK A++ V E+A Sbjct: 1 MKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKGKILFVGTKRAAAEVVKESALS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKR 147 Q+ VN +WLGGM+TNWKTV QSI++L+DLE + TKKE L R+ KL+ Sbjct: 61 CDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRARELAKLEN 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 +L GI+DMGGLPD +FVVD + E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ Sbjct: 121 SLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDGIAR 228 R+++L+ VA+ +G ++ Sbjct: 181 IRAVSLYLTAVATTVREGRSQ 201 >gi|213964105|ref|ZP_03392345.1| ribosomal protein S2 [Capnocytophaga sputigena Capno] gi|213953242|gb|EEB64584.1| ribosomal protein S2 [Capnocytophaga sputigena Capno] Length = 241 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 94/242 (38%), Positives = 152/242 (62%), Gaps = 2/242 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA I+ LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NNIEIKDLLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIVASGKKVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA++ Sbjct: 120 KMKKDGTFDTLSKREKLHVERMREKLEKNLGSIADMSRLPGALFVVDTLREHIAVKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VD+ IP NDD+S++I + A +G++ + + + ++ Sbjct: 180 LNIPIFAMVDTNSDPREVDFAIPANDDASKAIEKVLSYITEAVNEGLSSRTADANKEAEA 239 Query: 240 AG 241 A Sbjct: 240 AE 241 >gi|301055317|ref|YP_003793528.1| C-terminal part of ribosomal protein S2 [Bacillus anthracis CI] gi|300377486|gb|ADK06390.1| C-terminal part of ribosomal protein S2 [Bacillus cereus biovar anthracis str. CI] Length = 207 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 87/203 (42%), Positives = 139/203 (68%), Gaps = 1/203 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+RYIF ERN +IIDL +TV +++A +V+ D A GG ILFV TK QA + + E A R Sbjct: 1 MKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIAAEGGDILFVGTKKQAQEAIKEEATR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 + Y VN +WLGG +TN++T+ + I++L+D+E + + + KKE + ++++ ++L++ Sbjct: 61 AGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERMQEDGTFEVLPKKEVVQLKKELERLEK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L GI+DM GLP +FVVD +E++A+ EAR+L IPI+ +VDTN +PD +D+VIP NDD+ Sbjct: 121 FLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDHVIPANDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQH 230 R++ L +A A ++ + Sbjct: 181 IRAVKLLTSKMADAILEAKQGEE 203 >gi|325268206|ref|ZP_08134839.1| 30S ribosomal protein S2 [Prevotella multiformis DSM 16608] gi|324989348|gb|EGC21298.1| 30S ribosomal protein S2 [Prevotella multiformis DSM 16608] Length = 303 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 137/228 (60%), Gaps = 1/228 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLLE+G FGH WNP M YIF ERN HIIDL +TV + +A + + Sbjct: 27 MSRTNFDQLLEAGCHFGHLRRKWNPAMAPYIFMERNGIHIIDLHKTVAKIDEAAEALKGL 86 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA + V E A VN +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 87 ARSGKKILFVATKKQAKEAVAEKAAAVNMPYVNERWAGGMLTNFPTIRKAVKKMTNIDKL 146 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FVVD +E +A++EA RL Sbjct: 147 MNDGTFANLSKRELLQISRQRAKLEKNLGSIADLTRLPSALFVVDVMKEHIAVKEANRLG 206 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+ +VDTNS+P +D+VIP NDD+ S+ + A +G+ + Sbjct: 207 IPVFGIVDTNSDPKNIDHVIPANDDAKDSVEVILTACCDAIAEGLEER 254 >gi|11466956|ref|NP_054377.1| ribosomal protein S2 [Epifagus virginiana] gi|133909|sp|P27068|RR2_EPIVI RecName: Full=Plastid 30S ribosomal protein S2 gi|11549|emb|CAA43901.1| ribosomal protein S2 [Epifagus virginiana] gi|336925|gb|AAA65851.1| ribosomal protein S2 [Epifagus virginiana] Length = 237 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 124/224 (55%), Gaps = 1/224 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNPKM YI + H +L++T L +A ++ + Sbjct: 7 NIDLEEMIGAGVSFGHGTRKWNPKMAPYISVKHKGIHFTNLTKTARFLSEACDLVFYAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D AA ++ +CVN KW GGM+TNW T + KLRD + E Sbjct: 67 RGKQFLIVDTKNKAADSAAWAAIKARCHCVNKKWPGGMLTNWSTTETRLHKLRDLIMEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KK+ ++R+ +L+ L GI+ M LPD++ +VD + E A+ E + IP Sbjct: 127 AGRLNRLKKKDEAAVKRQLARLQTYLGGIKYMTRLPDIVIIVDQHEEYKALHECITIGIP 186 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 187 TIGLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICEGRS 230 >gi|229915461|gb|ACQ90806.1| ribosomal protein S2 [Oocystis solitaria] Length = 246 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 129/224 (57%), Gaps = 3/224 (1%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +GV FGH+ WNPKM +I+ E+N HIIDL QT L K Q +++ ++G L Sbjct: 1 MVRTGVHFGHQVRKWNPKMAPFIYAEKNGIHIIDLIQTYLYLNKVSQFLTEEASKGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 FV TK Q S + + A + VN +WLGG++TNWKT+ SI KL +L N + G Sbjct: 61 FVGTKKQVSRLIAKIALNCDSFYVNQRWLGGILTNWKTIKTSISKL---NQLQNLKVTGL 117 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 +KKE N+++++DKL++ L G++ M LPD++ +V E A++E + L I + ++DT Sbjct: 118 SKKEIANLKKQKDKLEKYLGGLKKMSALPDVVIIVGQPDEINAVRECQNLGIRSITLLDT 177 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 + +P L D +P NDDS S+ + A G + Y Sbjct: 178 DCDPSLADLFVPANDDSIASLQFVLNHFLEAIKKGQKKYQEYQS 221 >gi|2734691|gb|AAB93697.1| ribosomal protein subunit 2 [Striga asiatica] Length = 202 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L +T L +A ++ +R + L V T Sbjct: 1 GVHFGHILRKWNPKMAPYISGKRKGNHITNLIRTARFLSEACNLVFYAASRRKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 + + +D V AAK++ + VN KWL GM+TNW T + KLRDL E K+ Sbjct: 61 QKKEADSVAWAAKKARCHFVNKKWLRGMLTNWSTTETRLHKLRDLRIEQRVGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M LPD++ ++D + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTRLPDVVIILDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D+ IP NDDS SI L Sbjct: 181 PDLADFSIPANDDSRSSIRLIL 202 >gi|11467791|ref|NP_050842.1| ribosomal protein S2 [Nephroselmis olivacea] gi|25009144|sp|Q9TL03|RR2_NEPOL RecName: Full=30S ribosomal protein S2, chloroplastic gi|5880720|gb|AAD54813.1|AF137379_36 ribosomal protein S2 [Nephroselmis olivacea] Length = 272 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 93/267 (34%), Positives = 138/267 (51%), Gaps = 10/267 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ Q+L+ GV FGH+ WNPKM YIF ER HI+D+ QT +L KA A Sbjct: 3 TLEQMLDVGVHFGHQARKWNPKMAPYIFGERKGIHILDILQTAILLDKARVYARRQAASN 62 Query: 67 GRILFVATKSQASDCVMEAAKRS------AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 G LFV TK+QA+ V AA+R + VN +WLGGM+TNW T+ I++L +LE Sbjct: 63 GSFLFVGTKNQAASIVRFAAERCQKNDRSQAHYVNHRWLGGMLTNWPTMQLCIKRLLELE 122 Query: 121 -ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 Q F KKE ++ +L++ L G+++M GLP + +V +E A++E + Sbjct: 123 SNHERGGFQQFPKKEAAVARKQLARLEKHLGGVKNMTGLPTTVVIVGQPQEMNAVRECEK 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ ++D++ NP L D IP NDDS SI L + +G Q ++ Sbjct: 183 LGIPMITMLDSDCNPLLTDIGIPSNDDSIASIELVMREITKGIEEGQWIQKEGR---EEA 239 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD 266 E E +E+ E ++ Sbjct: 240 TIEIEWFVVEPTPVEKPLVIIEPPPVE 266 >gi|224831972|gb|ACN67052.1| ribosomal protein subunit 2 [Triaenophora rupestris] gi|224831982|gb|ACN67057.1| ribosomal protein subunit 2 [Triaenophora shennongjiaensis] Length = 194 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 1/194 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L +A ++ D+ +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDSASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDS 207 PDL D IP NDD+ Sbjct: 181 PDLADISIPANDDA 194 >gi|6650146|gb|AAF21741.1|AF055153_1 ribosomal protein subunit 2 [Verbena bonariensis] Length = 202 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R HI +L++T L A ++ D +RG + L V T Sbjct: 1 GVHFGHGTRKWNPKMAPYISAKRKGMHITNLTRTARFLSAACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 ++A++ V AA ++ +CVN KW GGM+TNW + K RD E K+ Sbjct: 61 TNKAANSVARAAIKARCHCVNKKWPGGMLTNWSITETRLHKFRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEESTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRLIL 202 >gi|15829004|ref|NP_326364.1| 30S ribosomal protein S2 [Mycoplasma pulmonis UAB CTIP] gi|25009219|sp|Q98Q36|RS2_MYCPU RecName: Full=30S ribosomal protein S2 gi|14089948|emb|CAC13706.1| 30S RIBOSOMAL PROTEIN S2 [Mycoplasma pulmonis] Length = 330 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 88/231 (38%), Positives = 146/231 (63%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + LE+GV FGHR WNPKM+++I +R HI+D+S+T L+ A ++I+ A+G Sbjct: 27 SKFLEAGVYFGHRTQQWNPKMKKFIHSKRRGIHILDVSKTSKALEWAYKIINAAAAKGAT 86 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 +FV TK A + V E A+R+ Y V +WLGG +TN KT+ +++L DLE++ + Sbjct: 87 FIFVGTKKHAKEIVKEQAQRTNSYYVTERWLGGTLTNSKTIFSRVRRLFDLEKMAENNFE 146 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 G+TKKE + +++ KL++ +GIR+M P+ M VVD N +++A++EAR + I+ ++ Sbjct: 147 GYTKKEGIEFKKELSKLQKNFEGIREMKTQPNFMIVVDPNVDRIAVKEARDKGVKIIGIL 206 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 D+++NPD VD IP NDDS +SI+L ++A A ++ + + D + Sbjct: 207 DSDANPDFVDLGIPANDDSIKSISLILTVLADAIVNAKGGKDLFAYQDEAN 257 >gi|315225071|ref|ZP_07866888.1| 30S ribosomal protein S2 [Capnocytophaga ochracea F0287] gi|314944754|gb|EFS96786.1| 30S ribosomal protein S2 [Capnocytophaga ochracea F0287] Length = 241 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 151/240 (62%), Gaps = 2/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA I+ LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NNIEIKDLLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIVASGKKVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA++ Sbjct: 120 KMKKDGTFDTLSKREKLHVERLREKLEKNLGSIADMSRLPGALFVVDTLREHIAVKEAQK 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VD+ IP NDD+S++I + A +G++ + + + +S Sbjct: 180 LNIPIFAMVDTNSDPREVDFAIPANDDASKAIEKVLSYITEAVNEGLSGRTAEANKEAES 239 >gi|6650150|gb|AAF21743.1|AF055155_1 ribosomal protein subunit 2 [Paulownia tomentosa] Length = 197 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H WNPKM YI +R HI +L++T L +A ++ D +RG + L V TK++A+ Sbjct: 1 HGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAA 60 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNI 138 D V AA ++ +CVN KWLGGM+TNW T + K RD E K++ + Sbjct: 61 DSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKRDAAVV 120 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVD 198 +R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL D Sbjct: 121 KRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDLAD 180 Query: 199 YVIPGNDDSSRSIALFC 215 IP NDD+ SI L Sbjct: 181 ISIPANDDAISSIRLIL 197 >gi|165910489|gb|ABY73999.1| ribosomal protein S2 [Dichondra carolinensis] Length = 202 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++++GV FGH WNPKM YI +R +I +L +T L +A ++ +RG + L Sbjct: 1 MMKAGVHFGHGIRKWNPKMAPYISAKRKGRYITNLIRTARFLAEACDLVFYAASRGNQFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE-NQG 129 V TK +A+D V +A+ ++ + VN KWLGGM+TNW T + K RDL Sbjct: 61 IVGTKKKAADSVAQASIKARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMQQKMGVLNR 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KK+ ++R+ +L+ L GI+ M LPD++ +VD ++E A++E L IP + ++D Sbjct: 121 LPKKDATMLKRQLARLQTYLGGIKYMSRLPDIVIIVDQHKEYTALRECITLGIPTICLID 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSI 211 T+ +P+L D IP NDD+ SI Sbjct: 181 TDCDPNLADISIPANDDAIGSI 202 >gi|2734647|gb|AAB93676.1| ribosomal protein subunit 2 [Bartsia alpina] Length = 204 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WN KM YI +R HI +L++T L +A ++ D +RG + L V T Sbjct: 1 GVPFGHVTRKWNTKMAPYISAKRKGIHITNLTRTARFLSEACGLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K++A+D V AA ++ +CVN KWLGGM+TNW T + KLRD E K+ Sbjct: 61 KNKAADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRDLRMEQKTGRLNRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ S L + Sbjct: 181 PNLADISIPANDDAISSXRLILNK 204 >gi|332879691|ref|ZP_08447382.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682318|gb|EGJ55224.1| ribosomal protein S2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 239 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 97/240 (40%), Positives = 151/240 (62%), Gaps = 2/240 (0%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA I++LL++GV FGH WNP M YI+ ERN H+I+L +T +++A + + Sbjct: 1 MA-NNIEIKELLDAGVHFGHLTRKWNPNMAPYIYMERNGIHVINLYKTAAKIEEAAEALK 59 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 VA G ++LFVATK QA D V E A + +W GGM+TN+ T+ ++++K+ ++ Sbjct: 60 KIVASGKKVLFVATKKQAKDVVAEKATSVKMPYITERWPGGMLTNFVTIRKAVKKMSSID 119 Query: 121 EL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ + +K+E+L++ER R+KL++ L I DM LP +FVVDT RE +A++EA+R Sbjct: 120 KMKKDGTFDTLSKREKLHVERLREKLEKNLGSIADMSRLPGALFVVDTLREHIAVKEAQR 179 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IPI A+VDTNS+P VD+ IP NDD+S+SI + A +G+A + + +T Sbjct: 180 LNIPIFAMVDTNSDPREVDFAIPANDDASKSIDKVLSYITEAVNEGLANRTATAEKETNE 239 >gi|162148791|ref|YP_001603252.1| 30S ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] gi|161787368|emb|CAP56963.1| 30S ribosomal protein S2 [Gluconacetobacter diazotrophicus PAl 5] Length = 248 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 113/189 (59%), Positives = 151/189 (79%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA+P FT+RQLLE+GV FGH WNP+M ++F RN HIIDL QTVPML +AL+ I Sbjct: 52 MAMPDFTMRQLLEAGVHFGHHTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLDRALKAIR 111 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVA GGR+LFV TK A+D + EAAKRS QY VN +WLGGM+TNWKT++ SI++LR ++ Sbjct: 112 DTVAGGGRVLFVGTKRAAADQIAEAAKRSGQYYVNHRWLGGMLTNWKTITGSIKRLRQID 171 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++L + G TKKE L+I R R+KL+R+L GI++MGGLPD++FV+DTN+EKLA++EA +L Sbjct: 172 DMLTGDTHGLTKKEILDITRNREKLERSLGGIKEMGGLPDILFVIDTNKEKLAVEEANKL 231 Query: 181 RIPIVAVVD 189 IP+VA++D Sbjct: 232 GIPVVAILD 240 >gi|255026414|ref|ZP_05298400.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J2-003] Length = 223 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 88/197 (44%), Positives = 135/197 (68%), Gaps = 1/197 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M++YIF ERN +IIDL +TV + +A + + + G ILFV TK QA + V + A R Sbjct: 1 MKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 S QY VN +WLGG +TN++T+ + IQ L+ +E + + + KKE + ++++++KL+R Sbjct: 61 SGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLER 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ +VDTN +PD +DYVIP NDD+ Sbjct: 121 FLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDA 180 Query: 208 SRSIALFCDLVASAAID 224 R++ L +A A I+ Sbjct: 181 IRAVKLLTAKMADAIIE 197 >gi|254477428|ref|ZP_05090814.1| ribosomal protein S2 [Ruegeria sp. R11] gi|214031671|gb|EEB72506.1| ribosomal protein S2 [Ruegeria sp. R11] Length = 227 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 121/210 (57%), Positives = 163/210 (77%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I+ RN HI+DL+QTVPML +AL + DTVA+GGR+LFV TK QA+ + EAA++ Sbjct: 1 MAPFIYGARNGIHIMDLTQTVPMLDQALTAVRDTVAKGGRVLFVGTKRQAAAPIAEAAEK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 SAQY +N +WLGG +TNWKTVSQSIQ+L+D++E + +G TKKERL +ER ++KL+ + Sbjct: 61 SAQYFMNHRWLGGTLTNWKTVSQSIQRLKDIDERMASGAEGLTKKERLGMERDQEKLQAS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L GI +MGG+PDL+FV+D +E LAI EA +L IP+VAVVDTN +P+ VDY+IPGNDD++ Sbjct: 121 LGGISEMGGVPDLLFVIDVKKEALAIAEANKLGIPVVAVVDTNCSPEGVDYIIPGNDDAA 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTK 238 R+IAL+CDLVA AA+DG+ Q G D Sbjct: 181 RAIALYCDLVARAALDGMTAQLGAAGVDLG 210 >gi|260780675|ref|YP_003227037.1| 30S ribosomal protein S2 [Bryopsis hypnoides] gi|260176753|gb|ACX33762.1| 30S ribosomal protein S2 [Bryopsis hypnoides] Length = 266 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 88/219 (40%), Positives = 140/219 (63%), Gaps = 2/219 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+++++E+GV FGH WNPKM YI+ E+N HIID+ QT L+K + + + ++G Sbjct: 4 TLQKMIEAGVHFGHPKDQWNPKMLPYIYKEKNGIHIIDIVQTWFYLKKISKFLEEACSQG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +ILFV TK QAS + A S + VN +WLGG++TNW T+ +SI KL LE+ N Sbjct: 64 KQILFVGTKKQASKIIESTAVDSNSFFVNERWLGGLLTNWSTIQKSILKLNSLEKYEN-- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 Q F+KKE++ +E+++ +L++ + G++ M LPD++ ++ +E A++E ++L I + Sbjct: 122 FQNFSKKEKVKLEKQKQRLEKYIGGLKTMKQLPDIVIIIGQQKELNAVKECQKLGIRTIT 181 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++DTN NP L D IP NDDS SI L +A + +G Sbjct: 182 LLDTNCNPLLADLFIPANDDSIASIKLIITELAKSIKNG 220 >gi|165910471|gb|ABY73990.1| ribosomal protein S2 [Cuscuta umbellata] Length = 197 Score = 261 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V GH WNPKM YI +RN HII+L +T L +A ++ D +RG + L V T Sbjct: 1 VHLGHSTRNWNPKMAPYISAKRNGIHIINLIRTARFLSEACDLVFDAASRGKKFLIVGTN 60 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKE 134 + A + V A+ R+ + VN KWLGGM+TNW T +Q RDL+ E + TKKE Sbjct: 61 NAADEAVARASIRARCHYVNKKWLGGMLTNWSTTETRLQTFRDLKLEQKKGGLKNLTKKE 120 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 +RK +L++ L GI+ M GLPD++ ++D ++E A+QE R L IP + ++DTN +P Sbjct: 121 ATIFKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKESTALQECRTLGIPTICLIDTNCDP 180 Query: 195 DLVDYVIPGNDDSSRSI 211 +L D IP NDD+ SI Sbjct: 181 NLSDIAIPANDDAIASI 197 >gi|89889406|ref|ZP_01200917.1| ribosomal protein S2 (rpsB) [Flavobacteria bacterium BBFL7] gi|89517679|gb|EAS20335.1| ribosomal protein S2 (rpsB) [Flavobacteria bacterium BBFL7] Length = 266 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 91/227 (40%), Positives = 142/227 (62%), Gaps = 1/227 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ LL++GV FGH W+P M YI+ ERN HII+L +T L +A + + A G Sbjct: 7 VKNLLDAGVHFGHLTRKWDPNMAPYIYMERNGIHIINLYKTKAKLDEANEALRKIAASGR 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFVATK QA D V + A + + +W GGM+TN+ T+ ++++K+ ++ + + Sbjct: 67 KILFVATKKQAKDIVAQHAGDANMPYITERWPGGMLTNFVTIRKAVKKMALVDRMKKDGR 126 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + +KKERL ++R R KL++ L I DM +P +F+VDT RE +A++EA +L IPI A Sbjct: 127 YETLSKKERLQVDRMRAKLEKNLGSIVDMTRMPAALFIVDTVREHIAVKEALKLGIPIFA 186 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + DTN+NP +DYVIP NDD+S+SI + + A A G+ + + Sbjct: 187 MADTNANPRDIDYVIPSNDDASKSIDIIVNSAAEAIKAGLEDRKNEK 233 >gi|294056015|ref|YP_003549673.1| ribosomal protein S2 [Coraliomargarita akajimensis DSM 45221] gi|293615348|gb|ADE55503.1| ribosomal protein S2 [Coraliomargarita akajimensis DSM 45221] Length = 270 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 93/267 (34%), Positives = 154/267 (57%), Gaps = 10/267 (3%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T + LL++GV FGH+ WNPK + Y++ RN IIDL +T +L+KA + +TVA G Sbjct: 4 TPKDLLDAGVHFGHQLRRWNPKSKPYVYDNRNGISIIDLEKTHALLEKAYAFVEETVASG 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NK 125 +LF+ TK QA + V EAA S ++W+GG +TN+ T+ S+ K R ++ + Sbjct: 64 KDVLFIGTKKQAQEIVREAATASQMPFCVNRWMGGGLTNFATIKTSLAKYRKFLKMDRDG 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + KE I R+ ++ R +GI ++ LP +FV+DT E++A+ EA RL IP+V Sbjct: 124 DLSKLPGKEEAAIRRQMARMHRNFEGILEVNELPAAVFVIDTKSEEIAVNEANRLGIPVV 183 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS--AGET 243 +VDTNS+P ++D+ IPGNDD+ +SI + + + A G+A++ + + E Sbjct: 184 GLVDTNSDPTVLDFPIPGNDDAVKSIRIIVETIMEAIQSGLAQREAKKVQKGAAPLVREQ 243 Query: 244 VVHSKEGMQL-------EEDSQSSESS 263 V +E +++ E++ ++SE Sbjct: 244 VFEQQEDVEVTLPAGYGEDEKETSEEK 270 >gi|50365378|ref|YP_053803.1| 30S ribosomal protein S2 [Mesoplasma florum L1] gi|50363934|gb|AAT75919.1| 30S ribosomal protein S2 [Mesoplasma florum L1] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 94/263 (35%), Positives = 157/263 (59%), Gaps = 7/263 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + T +L +GVQ+GH+ WNPKM +I+ ++ H+IDL +T+ L++A +++ Sbjct: 18 MAYKEVTRDELSAAGVQYGHQTKRWNPKMAPFIYGSKSKNHVIDLEKTLIQLRQAEKLVQ 77 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A+G ++LFV T+ A V EAA RS Y VN +WLGG +TN+KT+ + I+ L ++E Sbjct: 78 SIGAKGEKVLFVGTRRSAKLAVKEAALRSGNYYVNQRWLGGTLTNFKTIVKRIKALWEIE 137 Query: 121 E-LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E N + TKKE++ I +++ L+++L GI+ M LP + VVD +++A++EA + Sbjct: 138 ESEKNGQLALRTKKEQILILKEKANLEKSLGGIKQMRKLPAALIVVDPKSDEIAVKEAIK 197 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ + DTN +PD+V IP NDD S+ + + + A DG + + S Sbjct: 198 LNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIMINALVDAFADGANLKLAP------S 251 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 +TVV +E + E + ++ S Sbjct: 252 VLKTVVVKRERTEGENNYSNNRS 274 >gi|2734649|gb|AAB93677.1| ribosomal protein subunit 2 [Buchnera floridana] Length = 205 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 117/205 (57%), Gaps = 2/205 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GVQFGH WNPKM YI + HI +L++T L +A ++ +RG + L V T Sbjct: 1 GVQFGHVPRKWNPKMAPYISAKHKGIHITNLTRTARFLSEACDLVFYAASRGKQFLIVGT 60 Query: 75 -KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTK 132 K +A+D V AA ++ + VN KWLGGM+TNW + K RDL E K Sbjct: 61 QKKKAADLVAWAAIKARCHFVNKKWLGGMLTNWSITETKLHKFRDLRIEQRAGRLNRLPK 120 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 ++ ++R+ +L+R L GI+ M GLPD++ ++D + E A++E L IP + ++DTN Sbjct: 121 RDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIILDQHEEYKALRECITLGIPTICLIDTNC 180 Query: 193 NPDLVDYVIPGNDDSSRSIALFCDL 217 +PDL D+ IP NDD SI L + Sbjct: 181 DPDLADFSIPANDDGRSSIRLILNK 205 >gi|20379255|gb|AAF21733.2|AF055145_1 ribosomal protein subunit 2 [Orobanche caryophyllacea] Length = 204 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 3/204 (1%) Query: 15 GVQFGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 GV FGH WNPKM YI+ + + HII+ +T L +A ++ D +RG + L V Sbjct: 1 GVHFGHGIKKWNPKMAPYIYISAKHKDIHIINXIKTARFLSEACNLVFDAASRGKQFLIV 60 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFT 131 TK Q ++ V AA ++ +CVN KWLGG +TNW T + + RDL E + Sbjct: 61 GTKKQTANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRIEQKMGRFKRLP 120 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 K++ +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN Sbjct: 121 KRDAAVCKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTN 180 Query: 192 SNPDLVDYVIPGNDDSSRSIALFC 215 +PDL B+ IP NDDS SI L Sbjct: 181 CDPDLABFSIPANDDSIFSIRLIL 204 >gi|309322095|ref|YP_003933911.1| ribosomal protein S2 [Erodium texanum] gi|197131512|gb|ACH47274.1| ribosomal protein S2 [Erodium texanum] gi|300069188|gb|ADJ66310.1| ribosomal protein S2 [Erodium texanum] Length = 241 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 77/232 (33%), Positives = 125/232 (53%), Gaps = 3/232 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERY--IFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +LL V GH WNP+M Y I + + HI +L++T L +A ++ Sbjct: 7 NIGLEELLGEAVHLGHGIKKWNPRMAPYLLISPKCKDNHITNLTRTARFLAEACNLVFYA 66 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G R L V T + S+ V++AA ++ + VN KWLGGM+TNW T ++ RDL Sbjct: 67 ASEGKRFLIVGTTKKVSNYVVQAAIKARCHYVNKKWLGGMLTNWSTAETMLRTFRDLRTY 126 Query: 123 LNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N F K++ ++R+ L++ LDG++ M GLPD++ V+D A+ E L Sbjct: 127 QNTGRLDRFPKRDAAILKRQLSHLQKYLDGVQYMTGLPDIVIVLDQQDGFTALLECTALG 186 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP + ++DT+ +P+LVD+ IP ND+S SI + + A +G + S + Sbjct: 187 IPTIGLIDTDCDPNLVDFPIPANDESILSIRFILNKLVLAICEGRSSSKSSI 238 >gi|108796746|ref|YP_636476.1| ribosomal protein S2 [Zygnema circumcarinatum] gi|122239143|sp|Q32RQ0|RR2_ZYGCR RecName: Full=30S ribosomal protein S2, chloroplastic gi|61393730|gb|AAX45872.1| ribosomal protein S2 [Zygnema circumcarinatum] Length = 235 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 124/221 (56%), Gaps = 1/221 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + Q++E+GV FGH+ WNPK+ Y+ + II ++ T +L A ++ G Sbjct: 10 LEQMMEAGVHFGHQARKWNPKIAPYLLKDTKKIRIIHITHTARLLADACDFATNAAREGK 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 + + V T+ Q + V AK++ + VN+KWLGGM+TNW T+ +QK LE + Sbjct: 70 QFMLVGTRYQTAGLVATTAKKARCHYVNTKWLGGMLTNWSTIKTRLQKFEQLEAQEIAGA 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KKE ++R+ +L++ GI+ M +PD++ ++ +++ AIQE +L IP + Sbjct: 130 FNHLPKKEVAVMKRQLSQLRKYFHGIKYMKKVPDIVIFINQHQDYTAIQECIKLGIPTIG 189 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VDT+ +P+LVD IP NDD+ SI + +A +G + Sbjct: 190 LVDTDCDPNLVDMPIPANDDNRTSIRWILSQLTTAIKEGRS 230 >gi|165910465|gb|ABY73987.1| ribosomal protein S2 [Cuscuta campestris] Length = 204 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 V GH NPKM YI +R HI +L++T L +A ++ ++G + L V T Sbjct: 1 RVHLGHSTLNCNPKMTPYISAKRKGIHITNLTRTARFLSEACDLVFYAASKGKKFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 + A + V A+K + + VN KWLGGM+TNW T +QK RD E KK Sbjct: 61 NNAADEAVARASKSARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKKGGLNNLPKK 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 E ++RK +L++ L GI+ M GLPD++ ++D +++ A+QE R L IP ++++DTN + Sbjct: 121 EATMLKRKLARLQKYLGGIQYMTGLPDIVIIIDQHKDYTALQECRTLGIPTISLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFCDL 217 P+L D IP NDD+ SI + Sbjct: 181 PNLSDIAIPANDDAMASIRFILNK 204 >gi|61215529|sp|Q6F0Q4|RS2_MESFL RecName: Full=30S ribosomal protein S2 Length = 266 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 94/263 (35%), Positives = 157/263 (59%), Gaps = 7/263 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MA + T +L +GVQ+GH+ WNPKM +I+ ++ H+IDL +T+ L++A +++ Sbjct: 1 MAYKEVTRDELSAAGVQYGHQTKRWNPKMAPFIYGSKSKNHVIDLEKTLIQLRQAEKLVQ 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 A+G ++LFV T+ A V EAA RS Y VN +WLGG +TN+KT+ + I+ L ++E Sbjct: 61 SIGAKGEKVLFVGTRRSAKLAVKEAALRSGNYYVNQRWLGGTLTNFKTIVKRIKALWEIE 120 Query: 121 E-LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E N + TKKE++ I +++ L+++L GI+ M LP + VVD +++A++EA + Sbjct: 121 ESEKNGQLALRTKKEQILILKEKANLEKSLGGIKQMRKLPAALIVVDPKSDEIAVKEAIK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 L IP++ + DTN +PD+V IP NDD S+ + + + A DG + + S Sbjct: 181 LNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIMINALVDAFADGANLKLAP------S 234 Query: 240 AGETVVHSKEGMQLEEDSQSSES 262 +TVV +E + E + ++ S Sbjct: 235 VLKTVVVKRERTEGENNYSNNRS 257 >gi|6650132|gb|AAF21734.1|AF055146_1 ribosomal protein subunit 2 [Orobanche hederae] Length = 202 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 1/202 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV +GH WNPKM YI R HI +L +T L +A ++ D +RG + L V T Sbjct: 1 GVHWGHDIKKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKK 133 K + ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K+ Sbjct: 61 KKKTANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKR 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN + Sbjct: 121 DAAVSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIALFC 215 PDL D IP ND+S SI L Sbjct: 181 PDLADLSIPANDNSIFSIRLIL 202 >gi|291544884|emb|CBL17993.1| SSU ribosomal protein S2P [Ruminococcus sp. 18P13] Length = 222 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 1/200 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YIF ERN +IIDL +TV L++A + D A G +LFV TK QA D V E A R Sbjct: 1 MAPYIFTERNGIYIIDLQKTVKKLEEAYMFVRDLSAEGKSVLFVGTKKQAGDSVKEEATR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 + Y VN++WLGGMMTN+KT+ + +Q+L L + + KKE + + + +KL++ Sbjct: 61 AGAYYVNARWLGGMMTNFKTIQRRLQRLEQLHAMEADGTFNLLPKKEVIKLNLEIEKLEK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 + GI++M LP +F+VD +EK+A+ EA++L IPIVA+VDTN +PD VDYVIPGNDD+ Sbjct: 121 FMGGIKNMKQLPGALFIVDPRKEKIAVAEAKKLNIPIVAIVDTNCDPDEVDYVIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDGIA 227 R++ L +A+A I+G Sbjct: 181 IRAVKLIAGTIANAIIEGKQ 200 >gi|165910475|gb|ABY73992.1| ribosomal protein S2 [Cuscuta epilinum] Length = 202 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 118/202 (58%), Gaps = 1/202 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++++GV GH WNPKM +IF +R + HII+L T L +A ++ D +RG L Sbjct: 1 MMQAGVHLGHGTRKWNPKMAPFIFTKRKDIHIINLIGTARFLLEACDLVFDAASRGKNFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQG 129 V T ++ ++ V A+ ++ + VN KWL GM+TNW T +QK RD + Sbjct: 61 IVGTNNKTANLVARASIKARCHYVNKKWLAGMLTNWSTTETRLQKFRDLRMKQKKGGFHH 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 K++ ++R+ + + L GIR M GLPD++ ++D ++E +A++E L IP + ++D Sbjct: 121 LPKRDATVLKRQLARFETYLGGIRYMTGLPDIVIIIDQHKEYMALRECITLGIPTICLID 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSI 211 TN +P+L D IP NDD+ SI Sbjct: 181 TNCDPNLSDISIPANDDAISSI 202 >gi|313157473|gb|EFR56892.1| ribosomal protein S2 [Alistipes sp. HGB5] Length = 313 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 93/224 (41%), Positives = 138/224 (61%), Gaps = 1/224 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + LLE+G FGH WNPKM YIF E+N HIIDL +TV + +A I Sbjct: 1 MSRTDFNTLLEAGAHFGHLKRKWNPKMAPYIFMEKNGIHIIDLHKTVLKIDEAAAAIKQI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G R+LFVATK QA + V E V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGRRVLFVATKKQAKEIVAEKVAAVGMPYVTERWAGGMLTNFPTIRKAVKKMSTIDKM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + F+K+E+L I R+R KL++ L I D+ LP +FVVD +E A++EA+RL Sbjct: 121 NSDGTFDNFSKREKLQIARQRAKLEKNLGSIADLTRLPAALFVVDVQKESNAVKEAKRLS 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 IP+ A+VDT +P +DYVIP NDD+++SIA+ D + SA +G Sbjct: 181 IPVFAMVDTCCDPTDIDYVIPANDDATKSIAVVLDAMCSAIAEG 224 >gi|83319465|ref|YP_424355.1| 30S ribosomal protein S2 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123740053|sp|Q2SSA8|RS2_MYCCT RecName: Full=30S ribosomal protein S2 gi|83283351|gb|ABC01283.1| 30S ribosomal protein S2 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 291 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 101/280 (36%), Positives = 165/280 (58%), Gaps = 7/280 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNAAQKLLEFLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEEEEK 123 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L IP Sbjct: 124 KGRLSLRTKKEQIKILKEKAKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKLNIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A+ DTN++PD+VDYVIPGNDD S+ L +++ A +G + + T + Sbjct: 184 VIAICDTNADPDMVDYVIPGNDDLQESVNLIINILVEAYAEGAQIKMNPSVLRTVAPKRE 243 Query: 244 ------VVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 V S E ++ S ++E+ + + V V E+ Sbjct: 244 PRQINRPVMSSENQAEQQTSVANENVQMTNEPVVQVAEVE 283 >gi|331703590|ref|YP_004400277.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256383776|gb|ACU78346.1| ribosomal protein S2 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384606|gb|ACU79175.1| ribosomal protein S2 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455831|gb|ADH22066.1| ribosomal protein S2 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802145|emb|CBW54299.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 292 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 98/281 (34%), Positives = 162/281 (57%), Gaps = 8/281 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLETLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEEEEK 123 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L IP Sbjct: 124 KGRLSLRTKKEQIKILKEKAKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKLNIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A+ DTN++PD++DYVIPGNDD S+ L +++ A +G + + T + Sbjct: 184 VIAICDTNADPDMIDYVIPGNDDLQESVNLIINILVEAYAEGAQIKMNPSVLKTVAPKRE 243 Query: 244 V------VHSKEGMQLEEDSQSSESSV-LDGQEVAVVPELM 277 E E+ + + S+ + + V V E+ Sbjct: 244 PRQNRVMTPVVENQSTEQQASENVSNTQVSNEPVTPVVEVE 284 >gi|313665269|ref|YP_004047140.1| ribosomal protein S2 [Mycoplasma leachii PG50] gi|312949782|gb|ADR24378.1| ribosomal protein S2 [Mycoplasma leachii PG50] Length = 291 Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 98/280 (35%), Positives = 164/280 (58%), Gaps = 7/280 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLEFLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEEEEK 123 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L IP Sbjct: 124 KGRLSLRTKKEQIKILKEKAKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKLNIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A+ DTN++PD+VDYVIPGNDD S+ L +++ A +G + + T + Sbjct: 184 VIAICDTNADPDMVDYVIPGNDDLQESVNLIINILVEAYAEGAQIKMNPSVLRTVAPKRE 243 Query: 244 ------VVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + + E ++ S ++E+ ++ + V E Sbjct: 244 PRQINRPIVTSENQTEQQVSVANENVQMNSEPTVQVVETE 283 >gi|165910469|gb|ABY73989.1| ribosomal protein S2 [Cuscuta indecora] Length = 202 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 1/202 (0%) Query: 17 QFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 GH WNPKM YI R HII+L++T L +A ++ D +RG + L V T + Sbjct: 1 HLGHSTRNWNPKMAPYILANRKGIHIINLTKTARFLSEACDLVFDAASRGKKFLIVGTNN 60 Query: 77 QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKER 135 A + + A+ RS + VN KWLGG++TNW T ++ RDL+ + TKKE Sbjct: 61 VADEAIARASIRSRCHYVNKKWLGGLLTNWSTTETRLETFRDLKIKKRGGRFNNITKKEA 120 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +RK D+L++ L GI+ M LPD++ ++D ++E A+QE + L IP + ++DT+ +P Sbjct: 121 TMFQRKLDRLQKYLGGIQYMTELPDIVIIIDQHKEFTALQECKTLGIPTICLIDTDCDPH 180 Query: 196 LVDYVIPGNDDSSRSIALFCDL 217 L + IP NDD+ SI + Sbjct: 181 LSEIAIPANDDAIASIKFILNK 202 >gi|165910481|gb|ABY73995.1| ribosomal protein S2 [Cuscuta lupuliformis] Length = 202 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 ++ +GV FGH WNP+M +I +R HI +L++T L +A ++ D RG L Sbjct: 1 MMGAGVHFGHGTRKWNPQMVPFIAAKRKGIHITNLTRTARFLSEACDLVFDAARRGKTFL 60 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQG 129 V T ++A+D V A++++ + VN KWL GM+TNW T+ + K RD E Sbjct: 61 IVGTSNKAADSVARASRKARCHYVNKKWLAGMLTNWSTIETRLNKFRDLRMEQKKGGLNH 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 +K++ +R+ +L+ L GI+ M GLPD++ +VD ++E A++E L IP + ++D Sbjct: 121 LSKRDATLFKRQLARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPTICLID 180 Query: 190 TNSNPDLVDYVIPGNDDSSRSI 211 TN P+L D IP NDD+ SI Sbjct: 181 TNCEPNLSDISIPANDDAISSI 202 >gi|254443028|ref|ZP_05056504.1| ribosomal protein S2 [Verrucomicrobiae bacterium DG1235] gi|198257336|gb|EDY81644.1| ribosomal protein S2 [Verrucomicrobiae bacterium DG1235] Length = 316 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 90/235 (38%), Positives = 137/235 (58%), Gaps = 1/235 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + LL++GV FGH+ WNPK + ++F R +IDL++T L+KA + D VA Sbjct: 2 NIELTDLLDAGVHFGHQVKRWNPKSKGFVFDHRQGISVIDLAKTYEGLKKAYDFVEDVVA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +GG +L V TK QA + + E A + ++W+GG +TNW T++ SI K + + + Sbjct: 62 KGGEVLLVGTKRQAQEIIRETAANTGMPFCVNRWMGGTLTNWTTITSSITKYKKYMAMES 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KKE I R+ ++ R +GI M LP MFVVD N E +A+ EARR+++P Sbjct: 122 DGSLAKLPKKEGSAIRREMSRMHRNFEGIVKMDKLPAAMFVVDVNYEDIAVAEARRVKVP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 + A+VDTNS+P VDY IPGNDD+ +SI + + +A A G A++ + M Sbjct: 182 VAAIVDTNSDPSTVDYAIPGNDDAVKSIRIILEAIAEAVESGRAKRSARMNQGKG 236 >gi|222084190|ref|YP_002519784.1| ribosomal protein S2 [Gnetum parvifolium] gi|149941460|dbj|BAF64897.1| ribosomal protein S2 [Gnetum parvifolium] gi|220983527|dbj|BAH11295.1| ribosomal protein S2 [Gnetum parvifolium] Length = 240 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 127/220 (57%), Gaps = 2/220 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ V GH+ WNPKM YI E N HII+L QT L + + D + Sbjct: 9 FKDMIKVAVHLGHKKSEWNPKMGYYILTECRNRHIINLVQTAHFLSETCDFVLDAARKRK 68 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 L V T++ A+D V AAK++ + VN KW G++TNW T + +++ R+L++ + Sbjct: 69 EFLIVGTRTYAADLVASAAKKAGCHYVNYKWQSGLLTNWSTTKERLERFRNLKQKYDSGL 128 Query: 127 -NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ TKKE IE++ L++ L G+ M LPD++ +VD +E A++E R L IPI+ Sbjct: 129 FHRRRTKKEIALIEKQLALLQQYLGGVLYMKKLPDIVIIVDQQKESTAVRECRALGIPII 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +VDTN +PDLVD IP NDD+ S+ L + + SA G Sbjct: 189 GLVDTNCDPDLVDIPIPANDDARGSVGLILNKIMSAVSYG 228 >gi|301320885|gb|ADK69528.1| ribosomal protein S2 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 292 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 97/281 (34%), Positives = 161/281 (57%), Gaps = 8/281 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLETLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEEEEK 123 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K TKKE++ I +++ KL++AL GI+ M LP + VVD +++A++EA++L IP Sbjct: 124 KGRLSLRTKKEQIKILKEKTKLEKALGGIKQMHKLPAAIVVVDPKGDEIAVKEAKKLNIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A+ DTN++PD++DYVIPGNDD S+ L +++ A +G + + T Sbjct: 184 VIAICDTNADPDMIDYVIPGNDDLQESVNLIINILVEAYAEGAQIKMNPSVLKTVVPKRE 243 Query: 244 V------VHSKEGMQLEEDSQSSESSV-LDGQEVAVVPELM 277 E E+ + + S+ + + + V E+ Sbjct: 244 PRQNRVMTPVVENQSTEQQASENVSNTQVSNEPITPVVEVE 284 >gi|255522580|ref|ZP_05389817.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J1-175] Length = 187 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 84/187 (44%), Positives = 130/187 (69%), Gaps = 1/187 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E + Sbjct: 61 ASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERM 120 Query: 123 L-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L Sbjct: 121 EADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLH 180 Query: 182 IPIVAVV 188 IPI+ +V Sbjct: 181 IPIIGIV 187 >gi|94502273|ref|ZP_01308755.1| ribosomal protein S2 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833703|ref|YP_001597899.1| 30S ribosomal subunit protein S2 [Candidatus Sulcia muelleri GWSS] gi|209573682|sp|A8Z5V2|RS2_SULMW RecName: Full=30S ribosomal protein S2 gi|94451166|gb|EAT14109.1| ribosomal protein S2 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206193|gb|ABS30503.1| 30S ribosomal subunit protein S2 [Candidatus Sulcia muelleri GWSS] Length = 222 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 85/217 (39%), Positives = 137/217 (63%), Gaps = 1/217 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I + ++ G FGH WNP M +YIF ++ HIID+S+T+ + +A + I + V+ G Sbjct: 4 IEKFIKVGAHFGHTTSKWNPNMRKYIFMKKGGIHIIDISKTIKKINEACKFIKNIVSSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFVATK QA D V + AK+ + +WLGG++TN T+ QS++K+ ++ + ++ Sbjct: 64 KILFVATKKQAKDIVSDYAKKVNMPYITERWLGGILTNMSTIRQSVKKMNVIDRQKIDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L I+R ++KLK+ + I M LP + +VD +EK+A++E L IPI+ Sbjct: 124 YNMMSKKEKLLIDRLKNKLKKNIGSISKMNSLPACVIIVDVKKEKIAVKECINLCIPIIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDTN +P +DY IP NDDSS+SI L + ++ + Sbjct: 184 IVDTNCDPRNIDYPIPANDDSSKSIHLIISYLTNSIL 220 >gi|293977813|ref|YP_003543243.1| 30S ribosomal protein S2P [Candidatus Sulcia muelleri DMIN] gi|292667744|gb|ADE35379.1| SSU ribosomal protein S2P [Candidatus Sulcia muelleri DMIN] Length = 220 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 85/217 (39%), Positives = 137/217 (63%), Gaps = 1/217 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I + ++ G FGH WNP M +YIF ++ HIID+S+T+ + +A + I + V+ G Sbjct: 4 IEKFIKVGAHFGHTTSKWNPNMRKYIFMKKGGIHIIDISKTIKKINEACKFIKNIVSSGK 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKE 126 +ILFVATK QA D V + AK+ + +WLGG++TN T+ QS++K+ ++ + ++ Sbjct: 64 KILFVATKKQAKDIVSDYAKKVNMPYITERWLGGILTNMSTIRQSVKKMNVIDRQKIDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +KKE+L I+R ++KLK+ + I M LP + +VD +EK+A++E L IPI+ Sbjct: 124 YNMMSKKEKLLIDRLKNKLKKNIGSISKMNSLPACVIIVDVKKEKIAVKECINLCIPIIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDTN +P +DY IP NDDSS+SI L + ++ + Sbjct: 184 IVDTNCDPRNIDYPIPANDDSSKSIHLIISYLTNSIL 220 >gi|218661974|ref|ZP_03517904.1| 30S ribosomal protein S2 [Rhizobium etli IE4771] Length = 262 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 124/176 (70%), Positives = 151/176 (85%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+SDTVARGG Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+E+L E Sbjct: 61 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILGGEA 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 QGFTKKERLN+ER+R+KL +AL GIRDMGG PDLMF++DTN+EK+AI EA+ R P Sbjct: 121 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAQAPRHP 176 >gi|254360753|ref|ZP_04976901.1| ribosomal protein S2 [Mannheimia haemolytica PHL213] gi|153091323|gb|EDN73297.1| ribosomal protein S2 [Mannheimia haemolytica PHL213] Length = 240 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 144/221 (65%), Gaps = 3/221 (1%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H NPKM+ +IF RN H+I+L +T+P+ +AL ++ + G++LFV TK AS Sbjct: 21 HVTG--NPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRIASNNGKVLFVGTKRAAS 78 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNI 138 D V AA S Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L Sbjct: 79 DAVKAAAVESQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQDGTFDKITKKEALMR 138 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVD 198 R+ +KL+ +L GI+DM GLPD +FV+ + E +AI+EA L IP+ A+VDTNS PD V+ Sbjct: 139 TRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLGIPVFAIVDTNSTPDGVN 198 Query: 199 YVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 Y+IPGNDD++R+I L+ D +A +G + + + + Sbjct: 199 YIIPGNDDATRAIQLYLDSAVAAIKEGRGVETVEVAEEASA 239 >gi|182416306|ref|YP_001821372.1| ribosomal protein S2 [Opitutus terrae PB90-1] gi|209573673|sp|B1ZQ51|RS2_OPITP RecName: Full=30S ribosomal protein S2 gi|177843520|gb|ACB77772.1| ribosomal protein S2 [Opitutus terrae PB90-1] Length = 302 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 98/276 (35%), Positives = 153/276 (55%), Gaps = 3/276 (1%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T + LL++GV FGH+ WNP+ + ++F R IIDL +T L+KA + DTV Sbjct: 2 NVTPKDLLDAGVHFGHQTKRWNPRSKPFVFDHRQGISIIDLGKTHAALEKACTFLEDTVG 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG +LFV TK QA D + EAA + +WLGG +TN++TV +SI K + +++ Sbjct: 62 NGGNVLFVGTKRQAKDIIREAATSTNMPFCVDRWLGGTLTNYETVKRSIAKYKKYQQMET 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KE I+R+ ++++ GI DM GLP MFVVD N EK+A+ EA R IP Sbjct: 122 SGDMNKLASKEVAAIKREMVRMQKNFSGIVDMPGLPTAMFVVDVNHEKIAVAEAARSGIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 V + DTNS+P + + IPGNDD+ +SI + + + +A +G++++ + A + + Sbjct: 182 CVGICDTNSDPSTLSHPIPGNDDAVKSIRIIVEAIVAAVQNGLSQRDARRAARGAADLKA 241 Query: 244 VVHSKEGMQLEEDS--QSSESSVLDGQEVAVVPELM 277 + G+ E + + S V +VA V E Sbjct: 242 AAAAAAGITGETAATPEVDLSKVELPADVAAVVEGE 277 >gi|47459011|ref|YP_015873.1| 30S ribosomal protein S2 [Mycoplasma mobile 163K] gi|61215556|sp|Q6KIB4|RS2_MYCMO RecName: Full=30S ribosomal protein S2 gi|47458339|gb|AAT27662.1| 30S ribosomal protein s2 [Mycoplasma mobile 163K] Length = 300 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 96/255 (37%), Positives = 147/255 (57%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + ++LLE+G FGH+ LWNPKM+ +I ++ THIID++QT L+ A ++I + Sbjct: 23 VSKQKLLEAGTYFGHKASLWNPKMKPFIHSKKMGTHIIDIAQTRKALEYAYKLIEKYAQK 82 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +FV TK QA D V A R+ V+ +WLGG +TN +T+ ++ L DLE+L Sbjct: 83 GASFIFVGTKKQAKDVVKAQALRTNSIYVSERWLGGTLTNSRTIMNQVRTLSDLEKLEES 142 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +G+TKKE + +K KL+R L GIR+M LP +M V D N +K+AI+EA+R I I+ Sbjct: 143 GYEGYTKKEGVEFSKKLAKLQRNLTGIRNMKHLPQVMIVADVNTDKIAIKEAQRKNIKII 202 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 ++DTNS+P LV++ IP NDDS +S+ L ++A A + + + ++ Sbjct: 203 GILDTNSDPSLVNFGIPANDDSVKSLNLIITILADAIVAAKNGKQLFAYQGDEAIVFPAT 262 Query: 246 HSKEGMQLEEDSQSS 260 G EE Sbjct: 263 SENVGKDGEERKPRK 277 >gi|225165558|ref|ZP_03727376.1| ribosomal protein S2 [Opitutaceae bacterium TAV2] gi|224800196|gb|EEG18608.1| ribosomal protein S2 [Opitutaceae bacterium TAV2] Length = 302 Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats. Identities = 94/232 (40%), Positives = 135/232 (58%), Gaps = 1/232 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T + LL++GV FGH+ WNP+ + Y+F R IIDL +T +LQKA I DTVA Sbjct: 2 NVTPKDLLDAGVHFGHQTKRWNPRSKPYVFDHRQGITIIDLGKTYDLLQKAYTYIEDTVA 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL- 123 GG +LFV TK QA + + EAA + +WLGG +TN+ TV +SI K + + L Sbjct: 62 NGGNVLFVGTKKQAQEILREAATSTGMPYCVDRWLGGTLTNFATVKRSIAKFKKFQALET 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + E + KE I+R+ ++ + GI DM LP MFVVD N E +A+ EA R I Sbjct: 122 SGEINKLSAKEGAAIKREMVRMNKNFAGIVDMPELPSAMFVVDANHEDIAVAEAARCGIA 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + +VDTNS+P + + IPGNDD+ +SI + D + +A G+ ++ S A Sbjct: 182 CIGLVDTNSDPTKLSHPIPGNDDAVKSIRIIVDTIVAAIQSGLGQRDSRRAA 233 >gi|10179728|gb|AAG13856.1| ribosomal protein subunit 2 [Plantago major] Length = 202 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 1/199 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV GH WNPKM YI +R HI + + T L +A ++ +RG + L V T Sbjct: 1 GVHLGHEPRKWNPKMAPYISAKRKGIHITNXTXTARFLXEACDLVFGAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKK 133 K +A+D V AA R+ +CV KWLGGM+TNW T + K RDL K Sbjct: 61 KKKAADLVAWAAIRARCHCVTKKWLGGMLTNWSTTETRLHKFRDLRMKQKTGRLNRLPKX 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M GLPD++ +VD + A++E L IP + ++BTN + Sbjct: 121 DAAMLKRQLFRLQTYLGGIKYMTGLPDIVIIVDQHEXYTALRECITLGIPTICLIBTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIA 212 PDL B IP NDD I Sbjct: 181 PDLABXSIPANDDXISXIR 199 >gi|269115275|ref|YP_003303038.1| 30S ribosomal protein S2 [Mycoplasma hominis] gi|268322900|emb|CAX37635.1| 30S ribosomal protein S2 [Mycoplasma hominis ATCC 23114] Length = 299 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 97/262 (37%), Positives = 154/262 (58%), Gaps = 6/262 (2%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + +LLE+G FGHR WNPKM++YI+ +R HIID+++T L+ A ++++ Sbjct: 20 AIVSREKLLEAGTYFGHRVSQWNPKMKQYIWGKRMGIHIIDIAKTQKTLEYAYKLLNKMA 79 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + ++V TK QA + AA R+ V+ +WLGG +TN +T+ +S+++L LEEL Sbjct: 80 QKPISFIWVGTKKQAKKAIESAAARTNSVYVSERWLGGTLTNSQTIFRSVRELERLEELQ 139 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGG---LPDLMFVVDTNREKLAIQEARRL 180 E QG+TKKE L +++K KL++ L GIR + G +P +M +++AI+EA++ Sbjct: 140 KSEYQGYTKKEGLLMDKKIAKLQKNLGGIRKLAGKAAMPQVMICASPIDDEIAIREAKKK 199 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 + I A+ DTNSNPDLVD+VIP NDDS +SI L ++A A + Y KS Sbjct: 200 GLKIFAIQDTNSNPDLVDFVIPANDDSVKSITLITTILADAIASAHGEKPVYA---YKSN 256 Query: 241 GETVVHSKEGMQLEEDSQSSES 262 E ++ ++ + E + E Sbjct: 257 EEIILPEEQKPEKVEKIANIEE 278 >gi|262341005|ref|YP_003283860.1| 30S ribosomal protein S2 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272342|gb|ACY40250.1| 30S ribosomal protein S2 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 239 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 93/223 (41%), Positives = 142/223 (63%), Gaps = 1/223 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + + LL++GV FGH WNP M +IF ++ HIIDLS+T+ L++A + Sbjct: 2 KINTQDLLKAGVHFGHIARKWNPNMRPFIFMKKGGIHIIDLSKTIFKLEQACDGLKKIAI 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-L 123 G +IL V TK+QA + V AK CV +WLGG++TN+ T+ +S++K+ ++E++ Sbjct: 62 TGKKILLVGTKAQAKEKVFFYAKSINMPCVTERWLGGLLTNFTTIRKSVKKMNNIEKMKK 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N +KKERL + R +KL + L I +M +P +F+VD N+EK+A+ EA++L+IP Sbjct: 122 NGTFNTLSKKERLLVNRLYEKLHKNLGSISNMNHIPGGIFLVDPNKEKIALTEAKKLKIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I A+VDTN+NP+ + Y IP NDDSS+SI + VA + DGI Sbjct: 182 IFAMVDTNTNPNEIQYPIPSNDDSSKSIDIILKFVAESIQDGI 224 >gi|10179716|gb|AAG13850.1| ribosomal protein subunit 2 [Thunbergia alata] Length = 202 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 112/199 (56%), Gaps = 1/199 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH W P M YI +R HI +L++T L +A ++ D + G + L V TK++ Sbjct: 4 FGHGIRKWXPXMAPYISAKRKGIHITNLTRTASFLSEACDLVFDAXSGGKQFLIVGTKNK 63 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A+D V AA ++ +CVN KWLGGM+TNW T + K R E K++ Sbjct: 64 AADSVARAAIKAQCHCVNKKWLGGMLTNWSTTETRLHKFRGLRMEQKTGRLNRLPKRDAA 123 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++RK +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 124 VVKRKLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 183 Query: 197 VDYVIPGNDDSSRSIALFC 215 D IP NDD+ SI L Sbjct: 184 ADISIPANDDAISSIRLIL 202 >gi|2734655|gb|AAB93680.1| ribosomal protein subunit 2 [Conopholis americana] Length = 200 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 1/200 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI +R H +L++T L +A ++ D + G + L V T Sbjct: 1 GVPFGHGTRKWNPKMAPYILAKRKGIHFSNLTRTARFLSEACDLVFDAASMGKQFLIVDT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K +A+D V AA ++ +CVN KWL GM+TNW T + K RD E KK Sbjct: 61 KKKAADSVEWAAIKARCHCVNKKWLCGMLTNWSTTETLLNKFRDLRMEQKTGRLNRLKKK 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++R+ +L+ L GI+ M LPD++ +VD + + A++E L IP + ++DTN + Sbjct: 121 DGAVVKRQLARLQAYLYGIKYMTRLPDIVIIVDQHEDYKALRECITLGIPTICLIDTNCD 180 Query: 194 PDLVDYVIPGNDDSSRSIAL 213 PDL D IP NDD+ SI L Sbjct: 181 PDLADISIPANDDAISSIRL 200 >gi|108796972|ref|YP_636272.1| ribosomal protein S2 [Pseudendoclonium akinetum] gi|122233414|sp|Q3ZIZ5|RR2_PSEAK RecName: Full=30S ribosomal protein S2, chloroplastic gi|56159670|gb|AAV80694.1| ribosomal protein S2 [Pseudendoclonium akinetum] Length = 258 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 84/223 (37%), Positives = 138/223 (61%), Gaps = 1/223 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ Q++ +G+ FGH+ WNPKM+ +I+ ++++ HIIDL T L +A + ++D+V+ Sbjct: 13 LTLEQMVAAGMHFGHQARKWNPKMKPFIYAQKDSIHIIDLISTYTHLNEASKFLTDSVSI 72 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLN 124 G +ILFV TK Q S + +AA + VN KWLGG +TNW+T+ SIQKL+ LE + + Sbjct: 73 GQKILFVGTKKQVSQLIAKAALECDSFYVNGKWLGGQLTNWQTIKLSIQKLKSLETKERH 132 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 KKE ++++++KL + LDGI++M +PD++ ++ + E A++E ++L I Sbjct: 133 GLLGKIPKKEAALLKKEKEKLGKYLDGIKNMASIPDIVIIIGQSEEINAVRECKKLGIRT 192 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 + ++DT+ +P L D IP NDDS SI L +A G Sbjct: 193 ITILDTDCDPSLADLFIPANDDSISSIKLLLGEFVTAIKKGQQ 235 >gi|297170545|gb|ADI21573.1| ribosomal protein S2 [uncultured verrucomicrobium HF0070_35E03] Length = 323 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 155/266 (58%), Gaps = 6/266 (2%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T++ LL++GV FGH+ WNPK + +++ R+ IIDL +T +L+KA + + + V+ Sbjct: 2 NITVKDLLDAGVHFGHQVRRWNPKSKPFVYDNRHGISIIDLEKTYDLLEKASKAVEEVVS 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +G ++L V TK QA + + E A + ++W+GG +TN++TVS S+ K + + + Sbjct: 62 QGKQVLLVGTKRQAQEPIRELAAATNMPFSVNRWMGGTLTNFETVSASLAKYKKFLRMED 121 Query: 125 KEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + KE I+R+ +++R +G+ ++ LP +FV+D++ E +A+ EA RL+IP Sbjct: 122 DGSLDKLPGKEGAAIKRQMSRMQRNFEGLLNLQDLPGALFVIDSHNESIAVAEANRLKIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 ++A+VD+NS+P L+ + IPGNDDS++SI + D++ A G R+ + + + Sbjct: 182 VIALVDSNSDPSLLSHPIPGNDDSTKSIRIIVDVILDAIQSGAVRR-----VEAPTRRKD 236 Query: 244 VVHSKEGMQLEEDSQSSESSVLDGQE 269 + + + E ++ +G + Sbjct: 237 ITPIAQEPDFVDQEDEPEVTLPEGYD 262 >gi|261749478|ref|YP_003257164.1| 30S ribosomal subunit protein S2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497571|gb|ACX84021.1| 30S ribosomal subunit protein S2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 246 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 140/236 (59%), Gaps = 1/236 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + + LL++GV FGH WNP M +IF ++ HIIDLS+T+ L++A + V+ Sbjct: 4 KINTQDLLKAGVHFGHIARKWNPNMRPFIFMKKGGIHIIDLSKTITKLEEACIGLKKIVS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-L 123 +IL V TK+QA + V+ A+ CV +WLGG +TN+ T+ +S++K+ ++E++ Sbjct: 64 MEKKILLVGTKAQAKEKVLFYARSVNMPCVTERWLGGFLTNFATIRRSVKKMNNIEKMKK 123 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N +KKERL I R KL + L I M LP +F+VD +EK+A+ EA +L IP Sbjct: 124 NGTFDTLSKKERLLISRLYAKLYKNLGSISSMNHLPGGIFLVDPYKEKIALSEAIKLNIP 183 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + A+VDTN+NP+ + + IP NDDSS+SI + + A +G + + K+ Sbjct: 184 VFAMVDTNTNPNGIQFPIPSNDDSSKSIDIILKFITKAIQEGFSSVGKTDRNELKN 239 >gi|4469299|emb|CAB38449.1| 30S ribosomal protein S2 [Prototheca wickerhamii] Length = 257 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 75/227 (33%), Positives = 126/227 (55%), Gaps = 1/227 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +++SG+ FGH WNP+M+ +I+ +R+ HI+DL QT +L L + + + Sbjct: 9 IKLEDMVQSGMHFGHFTSEWNPRMQPFIYGKRHGRHILDLVQTYYLLNNLLAFLEKSAMQ 68 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN- 124 G + LFV TK Q + + + A Y VN +WLGGM+TNWKT+ S+ +L++ + Sbjct: 69 GKKFLFVGTKKQIAPLIAKTAISCNSYYVNQRWLGGMLTNWKTIQNSLYQLQEFRKAEQL 128 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E KKE +R++ +L + L G+ +M LPD++ ++ E A++E R+L I Sbjct: 129 GEWNLLKKKEIAQKKRQKLRLDKNLSGLENMKSLPDIVIIIGQAEELNAVKECRQLGITT 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 V ++D+N +P L D+ IP NDDS ++ A I G ++ Sbjct: 189 VTLLDSNCDPFLADWYIPANDDSVAAVQYLLSNFKEAIISGQKTNNA 235 >gi|193216480|ref|YP_001999722.1| 30S ribosomal protein S2 [Mycoplasma arthritidis 158L3-1] gi|193001803|gb|ACF07018.1| ribosomal protein S2 [Mycoplasma arthritidis 158L3-1] Length = 307 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 97/261 (37%), Positives = 147/261 (56%), Gaps = 5/261 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + +LLE+G FGHR WNPKM++YI +R HIID+S+T L+ A ++++ + Sbjct: 30 ISREKLLEAGTYFGHRVSQWNPKMKQYILGKRMGIHIIDISKTQKTLEYAYKLLNKMAQK 89 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++V TK QA + AA R+ V+ +WLGG +TN +T+ +S+++L LEEL Sbjct: 90 PISFIWVGTKKQAKKAIEAAALRTNSVYVSERWLGGTLTNSQTIFRSVKELERLEELQAN 149 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGG---LPDLMFVVDTNREKLAIQEARRLRI 182 QG+TKKE L ++K KL++ L GIR + G P +M +++AI EA++ I Sbjct: 150 GYQGYTKKEGLLFDKKIAKLQKNLGGIRKLAGKATFPKVMICASPLEDEIAIAEAKKKGI 209 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADTKSA 240 I A+ DTNSNPDLVD+ IP NDDS +SI + ++A A G A+ +Y D Sbjct: 210 KIFAIQDTNSNPDLVDFAIPANDDSVKSITVVTTILADAICAARGEAQLFAYKSNDEIVL 269 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 E + + QS + Sbjct: 270 PEEPKREYTQRKFQRRPQSGQ 290 >gi|256370656|ref|YP_003108481.1| 30S ribosomal protein S2 [Candidatus Sulcia muelleri SMDSEM] gi|256009448|gb|ACU52808.1| ribosomal protein S2 [Candidatus Sulcia muelleri SMDSEM] Length = 235 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 134/226 (59%), Gaps = 1/226 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + I + ++ G GH + WNP M +YIF ++ HI+D+S+T+ L +A + + Sbjct: 1 MLNLKIDEFIKVGAHLGHISSKWNPNMRQYIFMKKCGIHILDISKTIKKLNEACIFLKNI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121 + G +ILFVATK Q V + A + + +WLGG++TN T+ QS+++L+ ++ + Sbjct: 61 SSSGKKILFVATKKQIKTIVSDYADQVNMPYITERWLGGILTNIATIRQSVKQLKVIDRQ 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 L+ + +KKER I+R + KLK+ L I M LP + +VD EK+A+ E L Sbjct: 121 KLDGTYEMMSKKERFLIKRLKAKLKKNLGSIYKMNFLPACVIIVDVTEEKIAVNECLNLG 180 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 IPI+ +VDTNS+P + Y IP NDDSS+SI L + + ++GI+ Sbjct: 181 IPIIGIVDTNSDPRKIKYPIPANDDSSKSINLILSYLTDSILEGIS 226 >gi|222139886|ref|YP_002519953.1| ribosomal protein S2 [Ephedra equisetina] gi|220983554|dbj|BAH11321.1| ribosomal protein S2 [Ephedra equisetina] Length = 239 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 2/220 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + +++ V GH+ NPKM YI ER N HII+L +T+ L +A ++ D + Sbjct: 17 FKDMIKVAVHLGHQKNELNPKMRCYILTERGNLHIINLVRTILFLSEACDLLMDAARKRK 76 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE- 126 L V TK A+D + AK++ + +N KW GG++TNW T + +++ R+L++ Sbjct: 77 EFLLVGTKGYAADLIASTAKKTGCHYINYKWQGGLLTNWSTTKEKLERFRNLKQKYKSGL 136 Query: 127 -NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ TKKE IE++ + L++ L+GI M LPD++ +VD +E A++E R L IP + Sbjct: 137 FHRRRTKKEIALIEKQLELLQQYLEGIFYMKKLPDIVIIVDQQKESTAVRECRALGIPTI 196 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++VDTN +PD VD IP NDD+ S+ L + + SA G Sbjct: 197 SLVDTNCDPDFVDIPIPANDDARGSVGLILNKLMSAVSSG 236 >gi|307128587|ref|YP_003880617.1| 30S ribosomal protein S2 [Candidatus Sulcia muelleri CARI] gi|306483049|gb|ADM89919.1| 30S ribosomal protein S2 [Candidatus Sulcia muelleri CARI] Length = 218 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 129/213 (60%), Gaps = 1/213 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 G FGH WNP M YI ++ HIID+ +T+ + +A + I + + G +ILFVAT Sbjct: 2 GAHFGHTTSKWNPNMRPYILMKKGGIHIIDIYKTIKKINEACKFIKNIASSGKKILFVAT 61 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKK 133 K QA D V + AK+ + +WLGG++TN T+ QS++K+ + ++ +KK Sbjct: 62 KKQAKDIVYDFAKKVNMPSITERWLGGILTNMSTIRQSVKKMNVINNKKIDGTYNMMSKK 121 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 ERL I+R + KLK+ + I M LP + +VD +E++A++E L IPI+ +VDTNS+ Sbjct: 122 ERLLIDRLKIKLKKNIGSIYKMNSLPACVIIVDVKKEQIAVKECNNLCIPIIGIVDTNSD 181 Query: 194 PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 P +DY IP NDDSS+SI L + ++ +GI Sbjct: 182 PRNIDYPIPANDDSSKSINLILSYITNSINEGI 214 >gi|330721263|gb|EGG99356.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC2047] Length = 225 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 96/197 (48%), Positives = 132/197 (67%), Gaps = 1/197 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +IF RN HII+L TVP L AL V+ + +ILFV TK AS + E A R Sbjct: 1 MAPFIFGARNKIHIINLEHTVPALNDALAVVRKLASSKNKILFVGTKRAASKIIKEQAVR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 + VN +WLGGM+TN+KT+ QSI++LRDLE + TKKE L R+ +KL+R Sbjct: 61 ATMPYVNHRWLGGMLTNYKTIRQSIKRLRDLEAQQADGTFDQITKKEALMRTREMEKLER 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 ++ GI++MGGLPD +FV+D + E++A+ EA +L IP++ VVDTNSNPD +DYVIPGNDD+ Sbjct: 121 SIGGIKEMGGLPDALFVIDVDHERIAVNEANKLGIPVIGVVDTNSNPDGIDYVIPGNDDA 180 Query: 208 SRSIALFCDLVASAAID 224 RSI ++ VA ++ Sbjct: 181 IRSIQIYVQAVADNVLE 197 >gi|261415353|ref|YP_003249036.1| ribosomal protein S2 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371809|gb|ACX74554.1| ribosomal protein S2 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 246 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 137/214 (64%), Gaps = 1/214 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ LL +G FGH+ WNPKM+ YI E+N ++++LS+T +L++A + + G Sbjct: 6 SVEDLLAAGSHFGHQTQRWNPKMKPYILAEKNGIYVLNLSKTRDLLEEAAKAAAKISESG 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNK 125 +LFV TK A CV++AA Q+ V ++WLGGM+TN++TV +SI+K+ ++ + + Sbjct: 66 KTVLFVGTKPTARQCVLDAAATCNQFSVTNRWLGGMLTNFQTVRKSIKKIDKIDTMEQDG 125 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 Q +KKE L+ R+R KL GIR+M LP L+ V D EK+A+ EARRL IPI+ Sbjct: 126 TFQALSKKEVLDKTRERAKLLDVFGGIREMVNLPGLLVVTDLAHEKIAVAEARRLHIPII 185 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + DTN +P LVDY IP NDD+ +S+ L D +A Sbjct: 186 GICDTNVDPTLVDYPIPANDDAVKSLKLIVDYIA 219 >gi|11465574|ref|NP_045034.1| ribosomal protein S2 [Cyanidium caldarium] gi|14547997|sp|Q9TM33|RR2_CYACA RecName: Full=30S ribosomal protein S2, chloroplastic gi|6466430|gb|AAF13012.1|AF022186_184 unknown [Cyanidium caldarium] Length = 243 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 1/241 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ +LL++ GH WNPK +I + HIIDL +T+ + A + V Sbjct: 2 ETSLSELLDASAHIGHSTSKWNPKFFPFIHMTKKGIHIIDLIKTIQQISVACMFLKKEVR 61 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G R+LFV TK+QAS V AK+ ++ +N +W GG++TNW T+ S++KL+ LEE Sbjct: 62 NGKRVLFVGTKNQASKVVEREAKKCQEFYINQRWPGGLLTNWPTIKLSLKKLQLLEEKEK 121 Query: 125 KENQGFT-KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++ G T KKE +++R+ KL + L+GI+ M PD++ +VD +REK I E ++L IP Sbjct: 122 LDHLGSTSKKEEASMKREIQKLNKYLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIP 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + ++DTN NP V+ IP NDDS ++I L ++++ + ++ T++ E Sbjct: 182 TIGILDTNCNPKSVNVPIPANDDSIKAIDLIVSKLSTSIFKAKLENNQFIENSTENLNEH 241 Query: 244 V 244 V Sbjct: 242 V 242 >gi|294155606|ref|YP_003559990.1| 30S ribosomal protein S2 [Mycoplasma crocodyli MP145] gi|291600062|gb|ADE19558.1| 30S ribosomal protein S2 [Mycoplasma crocodyli MP145] Length = 316 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 87/225 (38%), Positives = 140/225 (62%), Gaps = 2/225 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISD 61 P + +LLE+G FGH+ WNPKM+ YI + HIID+S+T L+ A +I+ Sbjct: 27 PIVSKDKLLEAGAYFGHKVHQWNPKMKEYIVPGKTNRGAHIIDISKTQKYLEFAYSLINK 86 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 A+ +FV TK QA + EAA+R+ + V +WLGG +TN +T+ ++ + LE Sbjct: 87 FAAKKASFIFVGTKKQAHAAIKEAAERTQSFYVTERWLGGTLTNNQTIMSRVKAMEILEA 146 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +G+TKKE + +++ DKL + L+GIR+M +P +M V D N +++A++EAR+ Sbjct: 147 KAASGFKGYTKKEAIIFQKELDKLHKNLEGIRNMKHIPQVMIVADPNEDEIAVKEARKKG 206 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 I ++ ++D+N+NPD VD+ IP NDDSS+SI+L ++A A + Sbjct: 207 IKVIGILDSNANPDSVDFGIPANDDSSKSISLIITILADAIVKAR 251 >gi|113170440|ref|YP_717232.1| Rps2 [Ostreococcus tauri] gi|122222831|sp|Q0P3M3|RR2_OSTTA RecName: Full=30S ribosomal protein S2, chloroplastic gi|112806847|emb|CAL36354.1| Rps2 [Ostreococcus tauri] Length = 226 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 134/215 (62%), Gaps = 6/215 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ +LE+GV FGH++ WNPKM YI+ E+N HI+D+ QT+ L+KA Sbjct: 15 LQSMLEAGVHFGHQSRRWNPKMAPYIYEEKNGIHILDVVQTIGELEKARTAFKSA----K 70 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++FV T+ + + + A ++ VN++W+GG++TNW T++ ++KL L+ L Sbjct: 71 NVIFVGTRPAIAPLIEQVATKTGSNYVNTRWVGGLLTNWTTMTMCLEKLGRLDAQLETAT 130 Query: 128 --QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +GFTKK+ L++ R+R++L++ G+R++ LPDL+ +V E+ A+ E ++L IP + Sbjct: 131 PKKGFTKKDILSLTRERERLEKFFGGLRNLKTLPDLVVIVGQPNERNAVLECQKLNIPTI 190 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 ++D+N +P V Y IP NDDS+RS+A D + Sbjct: 191 TLLDSNCDPTFVSYGIPANDDSARSVAFILDQLTK 225 >gi|313678644|ref|YP_004056384.1| 30S ribosomal protein [Mycoplasma bovis PG45] gi|312950194|gb|ADR24789.1| 30S ribosomal protein [Mycoplasma bovis PG45] Length = 317 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 90/237 (37%), Positives = 146/237 (61%), Gaps = 5/237 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LLE+G FGH+ +WNPKM+ +++ + + H+I+ + T+ L+ A +++ VA Sbjct: 36 VSREKLLEAGTYFGHKKSMWNPKMKEFLYPQSKRGMHMINTNVTLQRLEFAYNILNKFVA 95 Query: 65 RGGR--ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + R +FV TK QA D + E A R+ + V+ +WLGG +TN T+ + ++ + +LE Sbjct: 96 KNPRTTFIFVGTKKQAKDTIKENALRTGSFYVSERWLGGTLTNASTIFKRVKVMEELESQ 155 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K+ QG+TKKE L +++ DKL + LDGIR M LP M V D N + +A++EAR + Sbjct: 156 AAKKFQGYTKKEGLIKQKELDKLHKNLDGIRKMQSLPSFMIVADPNVDAIAVKEARSKGV 215 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT 237 ++ ++D+NSNPD VD+ IP NDDS++SI L ++A A G + +Y G D Sbjct: 216 KVIGILDSNSNPDAVDFGIPANDDSAKSITLIMTILADAIATARGGKAKFAYQGDDK 272 >gi|10179738|gb|AAG13861.1| ribosomal protein subunit 2 [Lamium purpureum] Length = 202 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 107/199 (53%), Gaps = 1/199 (0%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 GV FGH WNPKM YI + HI + ++T L +A ++ D +RG + L V T Sbjct: 1 GVHFGHGXXKWNPKMAPYIXAKXKGIHITNXTKTXXFLSEACDLVFDAASRGKQFLIVGT 60 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKK 133 K +A+D V AA ++ +CVN KWLGG +TNW T + RDL K Sbjct: 61 KKKAADSVARAAIKARCHCVNKKWLGGXLTNWSTTXTXLHXFRDLXMQQKAGXLNRXPKX 120 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 + ++ + +L+ L GI+ M GLPD++ +VD + A+ L IP + ++BTN N Sbjct: 121 BAAVVKXQLYRLQTYLGGIKYMTGLPDIVIIVDQHEXYTALXXCITLGIPTICLIBTNCN 180 Query: 194 PDLVDYVIPGNDDSSRSIA 212 PBL B IP NDD+ SI Sbjct: 181 PBLABISIPANDDAISSIR 199 >gi|89243572|gb|ABD64905.1| ribosomal protein subunit 2 [Boschniakia himalaica] Length = 187 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI + HI +L++T L +A +I D +RG + L V TK++ Sbjct: 1 FGHGTRKWNPKMAPYISAKHKGIHITNLTRTARFLSEACNLIFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A+D V AA R+ +CVN KWLGGM+TNW T + K RD E K++ Sbjct: 61 AADSVAWAAIRARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQKTGRLNRLPKRDVA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ L+ L GI+ M GLPD++ +VD E A++E L IP + ++DTN +PDL Sbjct: 121 VVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|148377525|ref|YP_001256401.1| 30S ribosomal protein S2 [Mycoplasma agalactiae PG2] gi|209573671|sp|A5IY48|RS2_MYCAP RecName: Full=30S ribosomal protein S2 gi|148291571|emb|CAL58957.1| 30S ribosomal protein S2 [Mycoplasma agalactiae PG2] Length = 317 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 93/270 (34%), Positives = 155/270 (57%), Gaps = 5/270 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LLE+G FGH+ +WNPKM+ +++ + + H+I+ + T+ L+ A +++ VA Sbjct: 36 VSREKLLEAGTYFGHKKSMWNPKMKEFLYPQSKRGMHMINTNVTLQRLEFAYNILNKFVA 95 Query: 65 RGGR--ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + R +FV TK QA D + + A R+ + V+ +WLGG +TN T+ + ++ + +LE Sbjct: 96 KNPRTTFIFVGTKKQAKDTIKDNALRTGSFYVSERWLGGTLTNASTIFKRVKVMEELEAQ 155 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K+ QG+TKKE L +++ DKL + LDGIR M LP M V D N + +A++EAR + Sbjct: 156 AAKKFQGYTKKEGLIKQKELDKLHKNLDGIRKMQSLPSFMIVADPNVDAIAVKEARSKGV 215 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKSA 240 ++ ++D+NSNPD VD+ IP NDDS++SI L ++A A G + +Y G D Sbjct: 216 KVIGILDSNSNPDAVDFGIPANDDSAKSITLIMTILADAIATARGGKAKFAYQGDDKVIL 275 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E + +S E + +G + Sbjct: 276 PEFKTDKTLNPRFMNQRRSFEQNSAEGVKT 305 >gi|291320183|ref|YP_003515444.1| 30S ribosomal protein S2 [Mycoplasma agalactiae] gi|290752515|emb|CBH40487.1| 30S ribosomal protein S2 [Mycoplasma agalactiae] Length = 317 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 93/270 (34%), Positives = 155/270 (57%), Gaps = 5/270 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LLE+G FGH+ +WNPKM+ +++ + + H+I+ + T+ L+ A +++ VA Sbjct: 36 VSREKLLEAGTYFGHKKSMWNPKMKEFLYPQSKRGMHMINTNVTLQRLEFAYNILNKFVA 95 Query: 65 RGGR--ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + R +FV TK QA D + + A R+ + V+ +WLGG +TN T+ + ++ + +LE Sbjct: 96 KNPRTTFIFVGTKKQAKDTIKDNALRTGSFYVSERWLGGTLTNASTIFKRVKVMEELEAQ 155 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K+ QG+TKKE L +++ DKL + LDGIR M LP M V D N + +A++EAR + Sbjct: 156 AAKKFQGYTKKEGLIKQKELDKLHKNLDGIRKMQSLPSFMIVADPNVDAIAVKEARSKGV 215 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKSA 240 ++ ++D+NSNPD VD+ IP NDDS++SI L ++A A G + +Y G D Sbjct: 216 KVIGILDSNSNPDAVDFGIPANDDSAKSITLIMTILADAIATARGGKAKFAYQGDDKVIL 275 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 E + +S E + +G + Sbjct: 276 PEFKTDKTLNPRFMNQRRSFEQNSAEGVKT 305 >gi|325201145|gb|ADY96600.1| ribosomal protein S2 [Neisseria meningitidis H44/76] Length = 216 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 139/201 (69%), Gaps = 1/201 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +YIF RN HI++L +T+PM Q A + + VA G +LFV TK QA D + E A R Sbjct: 1 MAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE-LLNKENQGFTKKERLNIERKRDKLKR 147 + V+ +WLGGM+TN+KTV QSI++L + L N GF+KKE L ++R +KL+R Sbjct: 61 AGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLER 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 +L GI++M GLPD +FV+DT +K + EA +L IP++AVVDTN++PD V YVIPGNDDS Sbjct: 121 SLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDS 180 Query: 208 SRSIALFCDLVASAAIDGIAR 228 +++I L+C +A A ++G + Sbjct: 181 AKAIRLYCRGIADAVLEGKNQ 201 >gi|83745305|gb|ABC42364.1| ribosomal protein subunit 2 [Orobanche cernua var. desertorum] Length = 187 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V TK Q Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 A++ V AA ++ +CVN KWLGG +TNW T + + RDL E + K+++ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKRCPKRDKA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN +PD+ Sbjct: 121 VVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCDPDI 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|309775657|ref|ZP_07670656.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 3_1_53] gi|308916563|gb|EFP62304.1| ribosomal protein S2 [Erysipelotrichaceae bacterium 3_1_53] Length = 291 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ I+ RN +II+L +T+ L A + D +GG++LFV TK QA V+E A R Sbjct: 1 MKPNIYASRNGVYIINLEKTLEQLDTAYAAMKDIAEKGGKVLFVGTKKQAQAVVVEEALR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 S + VN +WLGG++TN++T+ + +++L ++EE+ N + KKE +++++ +L+ Sbjct: 61 SGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEMEANGTLDLYPKKEIAQVKKQKARLEN 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L GI++M LP+ +FV+D E A+ EA++L IP+ A+VDTN +P+ VDY I NDD+ Sbjct: 121 FLGGIKEMKKLPNAIFVIDPKEEHNAVAEAKKLGIPVFAMVDTNCDPETVDYPIASNDDA 180 Query: 208 SRSIALFCDLVASAAIDGI 226 RS+ L L+A A ++ Sbjct: 181 IRSVKLITTLMADAIVEAK 199 >gi|83745337|gb|ABC42380.1| ribosomal protein subunit 2 [Orobanche rapum-genistae] Length = 187 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V TK Q Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 A++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRLKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VGKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|293363738|ref|ZP_06610481.1| ribosomal protein S2 [Mycoplasma alligatoris A21JP2] gi|292552703|gb|EFF41470.1| ribosomal protein S2 [Mycoplasma alligatoris A21JP2] Length = 314 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 86/223 (38%), Positives = 138/223 (61%), Gaps = 2/223 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTV 63 + +LLE+G FGH+ WNPKM Y+ + HIID+++T L+ A +I+ Sbjct: 24 VSKDKLLEAGAYFGHKTHQWNPKMRDYLVPNKTNRGAHIIDITKTQKYLEFAYSLINKFA 83 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A+ +FV TK QA + EAA+R+ Y V +WLGG +TN +T+ ++ + LE Sbjct: 84 AKKASFIFVGTKKQAHAAIKEAAERTQSYYVTERWLGGTLTNNQTIMSRVKTMEQLEAKA 143 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +G+TKKE + +++ DKL + LDGIR+M +P +M V D N +++A++EA+R I Sbjct: 144 ASGFKGYTKKEAILFQKELDKLHKNLDGIRNMRHIPQVMIVADPNEDEIAVKEAKRKGIK 203 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++ ++D+NSNPD +D+ IP NDDS++SIAL ++A A + Sbjct: 204 VIGILDSNSNPDALDFGIPANDDSAKSIALVMTILADAIVKAR 246 >gi|255012656|ref|ZP_05284782.1| 30S ribosomal protein S2 [Bacteroides sp. 2_1_7] Length = 252 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 140/236 (59%), Gaps = 2/236 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YIF ERN HIIDL +TV + +A +V+ + +G ++LFVATK QA V + A Sbjct: 1 MAPYIFMERNGIHIIDLYKTVAKVDEAAEVMKNLAKQGKKVLFVATKKQAKQVVADKAAS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 V +W GGM+TN+ T+ ++I+K+ ++++ + +K+E+L I R+R KL++ Sbjct: 61 VGMPYVIERWPGGMLTNFPTIRKAIKKMATIDKMTKDGTFDNLSKREKLQITRQRAKLEK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L I D+ LP +FVVD +E +A++EA RL IP+ +VDTNSNP+ +DYVIP NDD+ Sbjct: 121 TLGSIVDLTRLPSALFVVDVMKEHIAVREANRLGIPVFGMVDTNSNPNNIDYVIPANDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESS 263 ++S+ + + A +G+ + + D ++A E ++ + ++ + Sbjct: 181 TKSVEVILGAICEAMNEGLQERKAEK-IDAEAAEEAPKRERKAKAAVKKERTKKED 235 >gi|254500621|ref|ZP_05112772.1| ribosomal protein S2 [Labrenzia alexandrii DFL-11] gi|222436692|gb|EEE43371.1| ribosomal protein S2 [Labrenzia alexandrii DFL-11] Length = 227 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 121/204 (59%), Positives = 162/204 (79%), Gaps = 1/204 (0%) Query: 43 IDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGM 102 +DLSQTVP+L +AL+ +SDTVA GGR+L V TK QA D V +A+ SAQY VN++WLGGM Sbjct: 1 MDLSQTVPLLHQALKAVSDTVAGGGRVLLVGTKRQAQDAVATSARNSAQYFVNARWLGGM 60 Query: 103 MTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDL 161 +TNWKT+SQSIQ+LR LEE LN + TKKERL ++R+R+KL+R L GI+DMGG+PDL Sbjct: 61 LTNWKTISQSIQRLRKLEETLNSDAANALTKKERLFMDREREKLERNLGGIKDMGGIPDL 120 Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +FV+DTNRE +AIQEARRL IP+ A++D+NS+P+ + Y +PGNDD+ R+++L+CDL+A A Sbjct: 121 IFVIDTNREAIAIQEARRLGIPVAAILDSNSSPEGITYPVPGNDDAGRALSLYCDLIARA 180 Query: 222 AIDGIARQHSYMGADTKSAGETVV 245 AIDGI+R G D ++ E V Sbjct: 181 AIDGISRAQGASGMDVGASEEAPV 204 >gi|89243576|gb|ABD64907.1| ribosomal protein subunit 2 [Orobanche chilensis] Length = 187 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI+ +R HI +L++T L +A ++ +RG + L V TK++ Sbjct: 1 FGHGTRKWNPKMAPYIYAKRKGIHITNLTRTARFLFEACNLVFGAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A++ V EAA ++ +CVN KWLGGM+TNW T + K RD E K+ Sbjct: 61 AANSVAEAAIKARCHCVNKKWLGGMLTNWSTTETRLYKFRDLRMEQKAGRLNLLPKRYAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M GLPD++ +VD + E +A++E L IP + ++DTN +PDL Sbjct: 121 VVKRQLYRLQTYLGGIKYMTGLPDIVIIVDQHEEYMALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|209573700|sp|Q4A5Z6|RS2_MYCS5 RecName: Full=30S ribosomal protein S2 gi|144575099|gb|AAZ43825.2| 30S ribosomal protein S2 [Mycoplasma synoviae 53] Length = 296 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 96/269 (35%), Positives = 158/269 (58%), Gaps = 4/269 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISD 61 P + +LLE+G FGH+ +W+PKM+ +I +R N HIID+ +T L+ A ++ Sbjct: 26 PIVSRDKLLEAGAYFGHKKQMWHPKMKEFIVPKRLNKNAHIIDIVKTQKYLEFAYSLVEK 85 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 A+G +FV TK QA V EAA+R+ V+ +WLGG +TN + + +QK+ +L++ Sbjct: 86 LAAKGVSFIFVGTKRQAKKTVKEAAERTNSLYVSERWLGGTLTNNSVIMKRVQKMNELDK 145 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + +G+TKKE L ++++ DKL + LDGI++M LP +M V D +K+AIQEA++ + Sbjct: 146 KAEQGFKGYTKKEALLLQKQLDKLHQNLDGIKNMRRLPQVMIVTDLVEDKIAIQEAKKKK 205 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADTKS 239 I I+ +VDTN +P ++D+ IP NDDSS+SI L +++A A G + ++Y D Sbjct: 206 IKIIGIVDTNVDPTVIDFGIPANDDSSKSINLIVNILADAIAKTQGKKQMYAYQPDDKIV 265 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 K E + S++ + + Sbjct: 266 LSNPHELKKSEEASEVKAASTKEKLTEEA 294 >gi|83745339|gb|ABC42381.1| ribosomal protein subunit 2 [Orobanche densiflora] Length = 187 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 A++ V AA ++ +CVN KWLGG +TNW T + + RDL E + K++ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VGKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745293|gb|ABC42358.1| ribosomal protein subunit 2 [Boschniakia hookeri] Length = 187 Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats. Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WN KM YI +R HI +L++T L +A ++ D +RG + L V TK++ Sbjct: 1 FGHVTRKWNTKMAPYISAKRKGIHITNLTRTARFLSEACGLVFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A+D V AA ++ +CVN KWLGGM+TNW T + KLRD E K++ Sbjct: 61 AADSVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKLRDLRMEQKTGRLNRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 MVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|11467017|ref|NP_041924.1| ribosomal protein S2 [Euglena gracilis] gi|266973|sp|P30389|RR2_EUGGR RecName: Full=30S ribosomal protein S2, chloroplastic gi|14378|emb|CAA77928.1| ribosomal protein S2 [Euglena gracilis] gi|415767|emb|CAA50111.1| 30S ribosomal protein S2 [Euglena gracilis] Length = 240 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 84/221 (38%), Positives = 132/221 (59%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ ++L S V GH+ WNP+M YI+ ER HIIDL QT+ L+KA + +V + Sbjct: 2 ITVEKMLNSSVHLGHKVKQWNPRMRIYIYGERKGLHIIDLLQTIVCLKKACNFLIRSVRK 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G R LFV TK S + A + + V +WLGG++TNW T+ I KL+ L + K Sbjct: 62 GKRALFVCTKRFFSILTQKIALKCNSFFVTKRWLGGILTNWITIKNCINKLKQLSKQKEK 121 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + TKKERL +++K+ KLK+ G+RDM P+++ ++ N+E A++E ++L I + Sbjct: 122 HHNLLTKKERLVLKKKKLKLKKYFSGMRDMTERPEIVIIIGQNKEINAVRECKKLGIASI 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 ++DTN +P L Y IP NDDS S++L ++ ++ G+ Sbjct: 182 TILDTNCDPTLTKYPIPSNDDSILSVSLILSVLCNSINRGV 222 >gi|165910477|gb|ABY73993.1| ribosomal protein S2 [Cuscuta europaea] Length = 191 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 1/191 (0%) Query: 22 NFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDC 81 WNPKM +IF +R + HII+L T L +A ++ D RG L V T ++A++ Sbjct: 1 TRKWNPKMAPFIFTKRKDIHIINLIVTARFLSEACDLVFDAANRGKNFLIVGTNNKAANL 60 Query: 82 VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIER 140 V A+ ++ + VN KWL GM+TNW T +QK RD E K++ ++R Sbjct: 61 VARASIKARCHYVNKKWLAGMLTNWSTTETRLQKFRDLRMEQKKGGFHHLPKRDATVLKR 120 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 + + ++ L GI+ M GLPD++ ++D ++E +A++E L IP + ++DTN +P+L D Sbjct: 121 QLARFQKYLGGIQYMTGLPDIVIIIDQHKEYIALRECITLGIPTICLIDTNCDPNLSDIS 180 Query: 201 IPGNDDSSRSI 211 IP NDD+ SI Sbjct: 181 IPANDDAISSI 191 >gi|83745333|gb|ABC42378.1| ribosomal protein subunit 2 [Orobanche flava] Length = 187 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D +R + L V TK Q Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAASRRKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + TK++ Sbjct: 61 VANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLTKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ L GI+ M GLPD++ +VD + E A+QE L IP + ++DTN +PDL Sbjct: 121 VGKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|222446763|gb|ACM51420.1| ribosomal protein S2 [Caulerpa filiformis] Length = 238 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 126/220 (57%), Gaps = 11/220 (5%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++++ ++GV GHR NPKM YI+ E+++ IIDL QT L+ A ++ D +RG Sbjct: 7 LQEMFDAGVHLGHRRRQGNPKMLPYIYKEKDDFQIIDLLQTYWYLKIACKLSFDRCSRGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+LFV T + + A + +N +WLGG +TNW T+ +SI K+ + + Sbjct: 67 RVLFVGTNRHIGKSIEQRANNCNCWYINKRWLGGFLTNWITMEKSILKMEQNQLI----- 121 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 E ++R++ +L++ L G++ M LPD++ +V +E A++E ++L+IP + + Sbjct: 122 ------ESTRLKRQKVRLEKYLGGVKTMKKLPDIVIIVGQQKEINAVRECQKLKIPSITI 175 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VDTN +P L D +IPGNDDS S+ + + A +G Sbjct: 176 VDTNCDPSLTDLLIPGNDDSLSSVNFILNKLEEAIREGQK 215 >gi|71894428|ref|YP_278536.1| 30S ribosomal protein S2 [Mycoplasma synoviae 53] Length = 270 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 95/267 (35%), Positives = 157/267 (58%), Gaps = 4/267 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTV 63 + +LLE+G FGH+ +W+PKM+ +I +R N HIID+ +T L+ A ++ Sbjct: 2 VSRDKLLEAGAYFGHKKQMWHPKMKEFIVPKRLNKNAHIIDIVKTQKYLEFAYSLVEKLA 61 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 A+G +FV TK QA V EAA+R+ V+ +WLGG +TN + + +QK+ +L++ Sbjct: 62 AKGVSFIFVGTKRQAKKTVKEAAERTNSLYVSERWLGGTLTNNSVIMKRVQKMNELDKKA 121 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +G+TKKE L ++++ DKL + LDGI++M LP +M V D +K+AIQEA++ +I Sbjct: 122 EQGFKGYTKKEALLLQKQLDKLHQNLDGIKNMRRLPQVMIVTDLVEDKIAIQEAKKKKIK 181 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADTKSAG 241 I+ +VDTN +P ++D+ IP NDDSS+SI L +++A A G + ++Y D Sbjct: 182 IIGIVDTNVDPTVIDFGIPANDDSSKSINLIVNILADAIAKTQGKKQMYAYQPDDKIVLS 241 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDGQ 268 K E + S++ + + Sbjct: 242 NPHELKKSEEASEVKAASTKEKLTEEA 268 >gi|183508520|ref|ZP_02958045.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701855|ref|ZP_02971516.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|182675957|gb|EDT87862.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701154|gb|EDU19436.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 349 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 135/221 (61%), Gaps = 2/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + Sbjct: 55 VSIVKLTESGAHIGLNPKKWNPKMASYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQN 114 Query: 66 GGRILFVATK-SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ++FV T+ + + A+R+ + V +WLGG +TN+ +S+S++K LL Sbjct: 115 GGTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFTNISRSLKKFNSNLALLE 174 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E ++KKE++ I ++ KL++ GI++M PD++ +VD + AI+EAR+L IP Sbjct: 175 SEEINKYSKKEQIAINKETAKLEKFYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIP 234 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++A+ +TN++P L+DY+IP N+ S +SI L ++A + + Sbjct: 235 VIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADSIAE 275 >gi|83745311|gb|ABC42367.1| ribosomal protein subunit 2 [Orobanche artemisiae-campestris] Length = 187 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AAK++ +CVN KWLGG +TNW T + + RDL E + K++ Sbjct: 61 TANSVACAAKKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLPIPA 187 >gi|171920466|ref|ZP_02931769.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902921|gb|EDT49210.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 349 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 135/221 (61%), Gaps = 2/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + Sbjct: 55 VSIVKLTESGAHIGLNPKKWNPKMASYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQN 114 Query: 66 GGRILFVATK-SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ++FV T+ + + A+R+ + V +WLGG +TN+ +S+S++K LL Sbjct: 115 GGTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFTNISRSLKKFNSNLALLE 174 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E ++KKE++ I ++ KL++ GI++M PD++ +VD + AI+EAR+L IP Sbjct: 175 SEEINKYSKKEQIAINKETAKLEKFYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIP 234 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++A+ +TN++P L+DY+IP N+ S +SI L ++A + + Sbjct: 235 VIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADSIAE 275 >gi|171920828|ref|ZP_02932004.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188524193|ref|ZP_03004255.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867363|ref|ZP_03079367.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273435|ref|ZP_03205971.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209553993|ref|YP_002284439.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550919|ref|ZP_03771868.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|238058203|sp|B5ZAJ9|RS2_UREU1 RecName: Full=30S ribosomal protein S2 gi|171903598|gb|EDT49887.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195659850|gb|EDX53230.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660839|gb|EDX54092.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249955|gb|EDY74735.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541494|gb|ACI59723.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225380073|gb|EEH02435.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 351 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 134/221 (60%), Gaps = 2/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + Sbjct: 55 VSIVKLTESGAHIGLNPKKWNPKMANYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQN 114 Query: 66 GGRILFVATK-SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ++FV T+ + + A+R+ + V +WLGG +TN+ +S+S++K LL Sbjct: 115 GGTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFANISRSLKKFNSNLALLE 174 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E ++KKE++ I ++ KL++ GI+ M PD++ +VD + AI+EAR+L IP Sbjct: 175 SEEINKYSKKEQIAINKETAKLEKFYGGIKTMKQRPDVLILVDPVNDVNAIKEARKLNIP 234 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++A+ +TN++P L+DY+IP N+ S +SI L ++A A + Sbjct: 235 VIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADAIAE 275 >gi|185178866|ref|ZP_02964639.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024373|ref|ZP_02997039.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518450|ref|ZP_03003938.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225551250|ref|ZP_03772196.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209503|gb|EDU06546.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018641|gb|EDU56681.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998067|gb|EDU67164.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225379065|gb|EEH01430.1| 30S ribosomal protein S2 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 351 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 134/221 (60%), Gaps = 2/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + Sbjct: 55 VSIVKLTESGAHIGLNPKKWNPKMANYIHAKRSNNHVIDILKTILFLDRAYKFLQEVAQN 114 Query: 66 GGRILFVATK-SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ++FV T+ + + A+R+ + V +WLGG +TN+ +S+S++K LL Sbjct: 115 GGTVMFVGTRGRVVKELIKVEAERTNSFYVTQRWLGGTLTNFANISRSLKKFNSNLALLE 174 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E ++KKE++ I ++ KL++ GI+ M PD++ +VD + AI+EAR+L IP Sbjct: 175 SEEINKYSKKEQIAINKETAKLEKFYGGIKTMKQRPDVLILVDPVNDVNAIKEARKLNIP 234 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++A+ +TN++P L+DY+IP N+ S +SI L ++A A + Sbjct: 235 VIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADAIAE 275 >gi|224179455|ref|YP_002600867.1| ribosomal protein S2 [Pycnococcus provasolii] gi|217314498|gb|ACK36840.1| ribosomal protein S2 [Pycnococcus provasolii] Length = 224 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 1/219 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ L+++G GHR WNP+M +YI+ RN HI+DL QTV L +A + +GG Sbjct: 4 LQALMKAGAFLGHRTSRWNPRMAKYIYARRNGVHILDLVQTVQCLDQARAFVKKLANQGG 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +LF+ T A+ +M AA RS + VN +WLGGM TNW T+ + +L L + + Sbjct: 64 SVLFLGTSRHAAGPIMAAAARSNSFYVNQRWLGGMFTNWSTMRLCVHRLTYLNQCGEDGT 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K+E + R+ +LK+ L G+ M LP+ + V + + A+ E RR IP + Sbjct: 124 FTTLPKREEAALRRQHARLKKYLGGLCGMEQLPNAVIVTGQSSDSHALAECRRSNIPTIG 183 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++D++ +P VD VIP NDDS+ S+ + G Sbjct: 184 ILDSDGDPTSVDLVIPANDDSAASLDYILTELTYCLSTG 222 >gi|260060692|ref|YP_003193772.1| 30S ribosomal protein S2 [Robiginitalea biformata HTCC2501] gi|88784822|gb|EAR15991.1| 30S ribosomal protein S2 [Robiginitalea biformata HTCC2501] Length = 389 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 91/250 (36%), Positives = 143/250 (57%), Gaps = 3/250 (1%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI+ ERN H+I+L +TV L +A + + A G +ILFVATK QA D V + Sbjct: 1 MAPYIYMERNGIHVINLYKTVAKLDEAGEALKKIAASGRKILFVATKKQAKDIVAQKVAE 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKR 147 + +W GGM+TN+ T+ ++++K+ ++ + + +KKERL ++R R KL++ Sbjct: 61 VNMPYITERWPGGMLTNFVTIRRAVKKMASIDRMKKDGTFNTLSKKERLQVDRLRAKLEK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L I DM LP +FVVDT RE +A++EA++L IPI A+VDTNS+P +D+VIP NDD+ Sbjct: 121 NLGSIADMTRLPGALFVVDTMREHIAVKEAQKLNIPIFAMVDTNSDPRPIDFVIPANDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKS--AGETVVHSKEGMQLEEDSQSSESSVL 265 S+SI + V DG+A + S A+ + A VV + + + + Sbjct: 181 SKSIEVIMSQVTQFVADGLAERKSEKSAEKEGRDADTDVVEKAPAVAKTDKAPAPAKQTK 240 Query: 266 DGQEVAVVPE 275 + + VV + Sbjct: 241 EIESEPVVEQ 250 >gi|209573702|sp|Q4A8V7|RS2_MYCH7 RecName: Full=30S ribosomal protein S2 gi|144575261|gb|AAZ53432.2| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 7448] Length = 318 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 87/253 (34%), Positives = 149/253 (58%), Gaps = 4/253 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 34 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 93 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA V E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 94 AQKGAKFIFVGTKKQAKKVVEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 153 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 154 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 213 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A + + ++ Sbjct: 214 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADAIASAKGGKKLFAYQSDEN 273 Query: 240 AGETVVHSKEGMQ 252 KE Q Sbjct: 274 IILPEDPEKELKQ 286 >gi|54020008|ref|YP_115572.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 232] gi|81603675|sp|Q601Z3|RS2_MYCH2 RecName: Full=30S ribosomal protein S2 gi|53987181|gb|AAV27382.1| 30s ribosomal protein S2 [Mycoplasma hyopneumoniae 232] Length = 318 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 152/262 (58%), Gaps = 4/262 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 34 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 93 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 94 AQKGAKFIFVGTKKQAKKVIEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 153 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 154 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 213 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A + + ++ Sbjct: 214 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADAIASAKGGKKLFAYQSDEN 273 Query: 240 AGETVVHSKEGMQLEEDSQSSE 261 KE Q S S E Sbjct: 274 IILPEDPEKELKQTRYRSNSFE 295 >gi|195928745|gb|ACG56052.1| ribosomal protein subunit 2 [Agalinis linifolia] Length = 185 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 1/185 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + Sbjct: 1 NINLEEMLEAGVHFGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 61 SGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQK 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ +L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 121 TGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 180 Query: 184 IVAVV 188 + ++ Sbjct: 181 TICLI 185 >gi|83745315|gb|ABC42369.1| ribosomal protein subunit 2 [Orobanche owerinii] gi|83745450|gb|ABC42431.1| ribosomal protein subunit 2 [Phelipanche hirtiflora] Length = 187 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI R HI +L +T L +A ++ D +RG ++L V TK + Sbjct: 1 LGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQLLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AAK++ +CVN KWLGG +TNW T + + RDL E + K++ Sbjct: 61 TANSVACAAKKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLPIPA 187 >gi|13357582|ref|NP_077856.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761852|ref|YP_001752106.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|25009227|sp|Q9PRB9|RS2_UREPA RecName: Full=30S ribosomal protein S2 gi|209573789|sp|B1AI12|RS2_UREP2 RecName: Full=30S ribosomal protein S2 gi|11357042|pir||D82943 ribosomal protein S2 UU026 [imported] - Ureaplasma urealyticum gi|6898972|gb|AAF30431.1|AE002102_5 ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827429|gb|ACA32691.1| 30S ribosomal protein S2 [Ureaplasma parvum serovar 3 str. ATCC 27815] Length = 349 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 135/221 (61%), Gaps = 2/221 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +I +L ESG G WNPKM YI +R+N H+ID+ +T+ L +A + + + Sbjct: 55 VSIVKLTESGAHIGLNPKKWNPKMASYIHAKRSNNHVIDILKTILFLDRAYKFLQEVSQN 114 Query: 66 GGRILFVATK-SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ++FV T+ + + A+R+ + V +WLGG +TN+ +S+S++K LL Sbjct: 115 GGTVMFVGTRGRVVKELIKAEAERTNSFYVTQRWLGGTLTNFTNISRSLKKFNSNLALLE 174 Query: 125 -KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 +E ++KKE++ I ++ KL++ GI++M PD++ +VD + AI+EAR+L IP Sbjct: 175 SEEINKYSKKEQIAINKETAKLEKFYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIP 234 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++A+ +TN++P L+DY+IP N+ S +SI L ++A + + Sbjct: 235 VIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADSIAE 275 >gi|72080397|ref|YP_287455.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 7448] Length = 300 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 87/253 (34%), Positives = 149/253 (58%), Gaps = 4/253 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 16 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA V E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 76 AQKGAKFIFVGTKKQAKKVVEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 135 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 136 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 195 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A + + ++ Sbjct: 196 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADAIASAKGGKKLFAYQSDEN 255 Query: 240 AGETVVHSKEGMQ 252 KE Q Sbjct: 256 IILPEDPEKELKQ 268 >gi|221142046|ref|ZP_03566539.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 176 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 119/176 (67%), Gaps = 1/176 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG++LFV TK QA + V A+R+ Q+ +N +WLGG++TN+KT+S+ I+++ ++E++ Sbjct: 61 SEDGGQVLFVGTKKQAQESVKSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + + KKE + ++++ D+L + L GIRDM +P +FVVD +E+ AI EA Sbjct: 121 EEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEA 176 >gi|209573703|sp|Q4AAW8|RS2_MYCHJ RecName: Full=30S ribosomal protein S2 gi|144227445|gb|AAZ44145.2| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae J] Length = 318 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 86/253 (33%), Positives = 149/253 (58%), Gaps = 4/253 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 34 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 93 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 94 AQKGAKFIFVGTKKQAKKVIEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 153 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 154 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 213 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A + + ++ Sbjct: 214 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADAIASAKGGKKLFAYQSDEN 273 Query: 240 AGETVVHSKEGMQ 252 KE Q Sbjct: 274 IILPEDPEKELKQ 286 >gi|89243574|gb|ABD64906.1| ribosomal protein subunit 2 [Orobanche elatior] Length = 187 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI R HII+L +T L +A ++ D + G + L V TK Q Sbjct: 1 FGHDIRKWNPKMAPYISANRKGIHIINLIKTARFLSEACNLVFDAASMGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745331|gb|ABC42377.1| ribosomal protein subunit 2 [Orobanche grossheimii] Length = 187 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI+ +R HI +L +T L +A ++ D +RG + L V TK Q Sbjct: 1 FGHDIRKWNPKMAPYIYAKRKGIHITNLIKTASFLSEACNLVFDAASRGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + +DL E + +K++ Sbjct: 61 VANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHEFKDLRIEQKMGRFKRLSKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +++ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VGKKQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745327|gb|ABC42375.1| ribosomal protein subunit 2 [Orobanche sintenisii] Length = 187 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHDIRKWNPKMAPYISATRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|295086491|emb|CBK68014.1| SSU ribosomal protein S2P [Bacteroides xylanisolvens XB1A] Length = 252 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 85/220 (38%), Positives = 133/220 (60%), Gaps = 2/220 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YIF ERN HIIDL +TV + +A + + G ++LFVATK QA V E A+ Sbjct: 1 MAPYIFMERNGIHIIDLHKTVAKVDEAAEALKQIAKSGKKVLFVATKKQAKQVVAEKAQS 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRDKLKR 147 V +W GGM+TN+ T+ ++++K+ +++L N +K+E L I R+R KL + Sbjct: 61 VNMPYVIERWPGGMLTNFPTIRKAVKKMATIDKLTNDGTYSNLSKREVLQISRQRAKLDK 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L I D+ LP +FV+D +E +A++EA RL IP+ +VDTNS+P VD+VIP NDD+ Sbjct: 121 TLGSIADLTRLPSALFVIDVMKENIAVREANRLGIPVFGIVDTNSDPSNVDFVIPANDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 ++S+ + D +A I+G+ + + D ++AGE + Sbjct: 181 TKSVEVILDACCAAMIEGLEERKAEK-IDMEAAGEAPANK 219 >gi|71893410|ref|YP_278856.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae J] Length = 300 Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 86/253 (33%), Positives = 149/253 (58%), Gaps = 4/253 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ Sbjct: 16 PIISKQKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKF 75 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G + +FV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 76 AQKGAKFIFVGTKKQAKKVIEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQ 135 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARR 179 + QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ Sbjct: 136 AAENFQGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARK 195 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 I I+ + D+N +P LVD+ IP NDDS++SI L ++A A + + ++ Sbjct: 196 KGIKIIGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADAIASAKGGKKLFAYQSDEN 255 Query: 240 AGETVVHSKEGMQ 252 KE Q Sbjct: 256 IILPEDPEKELKQ 268 >gi|165910479|gb|ABY73994.1| ribosomal protein S2 [Cuscuta japonica] Length = 190 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 1/190 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNP+M +I +R HI +L++T L +A ++ D RG + L V T ++A+D V Sbjct: 1 KWNPQMAPFIAAKRKGIHITNLTRTARFLSEACDLVFDAARRGKKFLIVGTNNKAADSVA 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKR 142 A++++ + VN KWL GM+TNW T + K RD E K++ +R+ Sbjct: 61 RASRKARCHYVNKKWLAGMLTNWSTTETRLNKFRDLRTEQKKGGLNHLPKRDATMFKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIP 202 +L+ L GI+ M GLPD++ +VD ++E A++E L IP + ++DTN +P+L D IP Sbjct: 121 ARLQTYLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPTICLIDTNCDPNLSDISIP 180 Query: 203 GNDDSSRSIA 212 NDD+ SI Sbjct: 181 ANDDAISSIR 190 >gi|224179493|ref|YP_002601019.1| ribosomal protein S2 [Monomastix sp. OKE-1] gi|217314536|gb|ACK36879.1| ribosomal protein S2 [Monomastix sp. OKE-1] Length = 270 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 48/265 (18%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I +LLE+GV FGHR WNPKM YIF ERN HIID+ QT+ L+++ +S + Sbjct: 2 IPIEELLEAGVHFGHRVNKWNPKMAPYIFGERNGVHIIDIIQTLGYLEESYLFLSKYTVK 61 Query: 66 -------------------GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNW 106 G ++LFV TK Q + V A+ S VN +WLGG++TNW Sbjct: 62 GALRNSSSPSNPKTFGEGIGQKVLFVGTKKQVASIVQAEAENSHANYVNHRWLGGLLTNW 121 Query: 107 KTVSQSIQKLRDLEE---LLNKENQG----------FTKKERLNIERKRDKLKRALDGIR 153 T+ I KL+ L N E TKKE+ ++++ +KLK+ GI Sbjct: 122 STIKLCIAKLKTLRASGLFENTEISSVNNSTKTSLVTTKKEKALLKKQYEKLKKFFSGIE 181 Query: 154 DMGGLPDLMFVVDTNREKLAIQEARRLRI----------------PIVAVVDTNSNPDLV 197 +M +PD++ +V + E A++E ++L + ++DTN +P L Sbjct: 182 NMSDIPDIVIIVGQDCEMNAVKECQKLASSWRSDTNSTKGGNALPRTITILDTNCDPSLA 241 Query: 198 DYVIPGNDDSSRSIALFCDLVASAA 222 D IP NDDS++S+ L + A Sbjct: 242 DLFIPANDDSTKSVELILKKLGEAI 266 >gi|83745325|gb|ABC42374.1| ribosomal protein subunit 2 [Orobanche lutea] Length = 187 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HII+L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHGIKKWNPKMAPYISAKRKGIHIINLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + +LRDL E + +K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQLRDLRIEQKMGRFKRLSKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VGKRQLSHLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745343|gb|ABC42383.1| ribosomal protein subunit 2 [Cistanche phelypaea subsp. phelypaea] Length = 187 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPK+ YI +R HI +L++T L +A ++ D +RG + L V TK++ Sbjct: 1 FGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A++ V AA ++ + VN KWLGGM+TNW T + + RD E +++ Sbjct: 61 AANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKMGRLNRLPRRDSA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M LPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745335|gb|ABC42379.1| ribosomal protein subunit 2 [Orobanche gracilis] Length = 187 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D RG + L V TK + Sbjct: 1 FGHGIRKWNPKMAPYISAKRKGIHITNLIKTARFLSEACNLVFDAARRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 A++ V AA ++ +CVN KWLGG +TNW T + + RDL E + TK++ Sbjct: 61 AANSVTCAAIKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKRLTKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ GI+ M GLPD++ +VD + E A++E L IP + ++DTN +P L Sbjct: 121 VGKRQLSRLQTYFGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPYL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745323|gb|ABC42373.1| ribosomal protein subunit 2 [Orobanche teucrii] Length = 189 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 18 FGHRNFLWNPKMERYIF--CERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 FGH WNPKM YI+ + HII+L +T L +A ++ D +RG + L V TK Sbjct: 1 FGHGIKKWNPKMAPYIYISAKHKGIHIINLIKTARFLSEACNLVFDAASRGKQFLIVGTK 60 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKE 134 Q ++ V AA ++ +CVN KWLGG +TNW T + + RDL E + K++ Sbjct: 61 KQTANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRIEQKMGRFKRLPKRD 120 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +P Sbjct: 121 AAVCKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDP 180 Query: 195 DLVDYVIPG 203 DL D+ IP Sbjct: 181 DLADFSIPA 189 >gi|308189983|ref|YP_003922914.1| 30S ribosomal protein S2 [Mycoplasma fermentans JER] gi|307624725|gb|ADN69030.1| 30S ribosomal protein S2 [Mycoplasma fermentans JER] Length = 330 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 86/250 (34%), Positives = 147/250 (58%), Gaps = 5/250 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LLE+G FGH+ +WNP+M+ ++ + + H+I+ + T+ L+ +++ +A Sbjct: 21 VSKDKLLEAGTYFGHKASMWNPRMKEFLLPQPKRGVHVINSNFTLQRLEFIYNLLNKFLA 80 Query: 65 RGGR--ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +FV TK QA + + + A R+ Y V +WLGG +TN T+ + ++ + +LE Sbjct: 81 KNPHASFIFVGTKKQARETIKDNALRTNSYYVTERWLGGTLTNSSTIFKRVKTMEELEAK 140 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K +G+TKKE L ++K DKL + L+GIR M GLP M V D N +++A++EAR+ + Sbjct: 141 AAKGFEGYTKKEGLLFQKKLDKLHKNLEGIRRMQGLPTFMIVADPNDDEIAVKEARKKGV 200 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKSA 240 I+ ++D+N+NPDLVD+ IP NDDS++SI L ++A A G + ++ + Sbjct: 201 KIIGILDSNANPDLVDFGIPANDDSAKSITLIITILADAIATARGGRARFAFQPDEKIVL 260 Query: 241 GETVVHSKEG 250 E KE Sbjct: 261 PEFKSERKEN 270 >gi|220983461|dbj|BAH11230.1| ribosomal protein S2 [Welwitschia mirabilis] Length = 323 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 33/263 (12%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-------------------------- 36 + + + +++ V G++ WNPKM YI E Sbjct: 59 MKRNLFKNMIKEAVHLGNKKNEWNPKMASYILTEYKMTERKNLPVHLGNKKNKWSLDRAS 118 Query: 37 -----RNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 R N HII+L QT L + ++ + IL V T+ +D V AAK++ Sbjct: 119 YSLYRRKNRHIINLVQTAHFLSETCNLLFKAARKRKEILIVGTRRYIADLVASAAKKAQC 178 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE--NQGFTKKERLNIERKRDKLKRAL 149 + VN KW GG++TNW T + +++ R+L++ + ++ TKKE IE++ + L + L Sbjct: 179 HYVNYKWQGGLLTNWSTTKERLKRFRNLKQKYDSGLFHRRRTKKEIALIEKQLELLYQYL 238 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSR 209 GI M LPD++ +VD +E A++E R LRIP +++VDTN +PDLVD IP NDD+ Sbjct: 239 KGILYMKKLPDIVIIVDQQKESTAVRECRALRIPTISLVDTNCDPDLVDIPIPANDDAPG 298 Query: 210 SIALFCDLVASAAIDGIARQHSY 232 S+ L + + SA G Sbjct: 299 SVRLILNRLMSAVSAGYKTTQQQ 321 >gi|83745447|gb|ABC42430.1| ribosomal protein subunit 2 [Phelipanche oxyloba] Length = 187 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|319777265|ref|YP_004136916.1| 30S ribosomal protein s2 [Mycoplasma fermentans M64] gi|238809936|dbj|BAH69726.1| hypothetical protein [Mycoplasma fermentans PG18] gi|318038340|gb|ADV34539.1| 30S ribosomal protein S2 [Mycoplasma fermentans M64] Length = 330 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 86/250 (34%), Positives = 146/250 (58%), Gaps = 5/250 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +LLE+G FGH+ +WNP+M+ ++ + + H+I+ + T+ L+ +++ +A Sbjct: 21 VSKDKLLEAGTYFGHKASMWNPRMKEFLLPQPKRGVHVINSNFTLQRLEFIYNLLNKFLA 80 Query: 65 RGGR--ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + +FV TK QA + + + A R Y V +WLGG +TN T+ + ++ + +LE Sbjct: 81 KNPHASFIFVGTKKQARETIKDNALRINSYYVTERWLGGTLTNSSTIFKRVKTMEELEAK 140 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K +G+TKKE L ++K DKL + L+GIR M GLP M V D N +++A++EAR+ + Sbjct: 141 AAKGFEGYTKKEGLLFQKKLDKLHKNLEGIRRMQGLPTFMIVADPNDDEIAVKEARKKGV 200 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKSA 240 I+ ++D+N+NPDLVD+ IP NDDS++SI L ++A A G + ++ + Sbjct: 201 KIIGILDSNANPDLVDFGIPANDDSAKSITLIITILADAIATARGGRARFAFQPDEKIVL 260 Query: 241 GETVVHSKEG 250 E KE Sbjct: 261 PEFKSERKEN 270 >gi|312601023|gb|ADQ90278.1| 30S ribosomal protein S2 [Mycoplasma hyopneumoniae 168] Length = 283 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 86/248 (34%), Positives = 147/248 (59%), Gaps = 4/248 (1%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++LLE+GV FGH+ W+PKM +++ + RN THIID+ +T ML+ A +++ +G Sbjct: 4 QKLLEAGVYFGHKASQWHPKMAQFLLKKKRNETHIIDVLKTQKMLEIAYKLVEKFAQKGA 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + +FV TK QA V E A R+ V+ +WLGG +TN +T+ ++ + +LE+ + Sbjct: 64 KFIFVGTKKQAKKVVEEQAVRTNSIYVSGRWLGGTLTNNRTILSRLKTMENLEKQAAENF 123 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLP---DLMFVVDTNREKLAIQEARRLRIPI 184 QG+TKKE+L +++ KL++ L+GI+ + +P +M V D ++ +A++EAR+ I I Sbjct: 124 QGYTKKEKLAKQKQLAKLQKNLNGIKGLKDVPLFSLIMLVADPLKDAIAVKEARKKGIKI 183 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + + D+N +P LVD+ IP NDDS++SI L ++A A + + ++ Sbjct: 184 IGITDSNVDPSLVDFGIPANDDSTKSITLIFTVLADAIASAKGGKKLFAYQSDENIILPE 243 Query: 245 VHSKEGMQ 252 KE Q Sbjct: 244 DPEKELKQ 251 >gi|83745341|gb|ABC42382.1| ribosomal protein subunit 2 [Cistanche phelypaea subsp. lutea] Length = 187 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPK+ YI +R HI +L++T L +A ++ D +RG + L V TK++ Sbjct: 1 FGHGIRKWNPKIAPYISAKRKGIHITNLTRTARFLFEACNLVFDAASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 ++ V AA ++ + VN KWLGGM+TNW T + + RD E +++ Sbjct: 61 VANLVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHRFRDLRMEQKMGRLNRLPRRDSA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M LPD++ +VD + E A+QE L IP + ++DTN +PDL Sbjct: 121 VVKRQLYRLQTYLGGIKYMTRLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745307|gb|ABC42365.1| ribosomal protein subunit 2 [Orobanche coerulescens] Length = 187 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI + HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHGIKKWNPKMAPYISAKHKGIHITNLVKTARFLYEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 A++ V AA ++ +CVN KWLGG +TNW T + + RDL + + K++ Sbjct: 61 AANSVACAAIKARCHCVNKKWLGGTLTNWSTTESRLNQFRDLRIKQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + ++DTN +PDL Sbjct: 121 VGKRQLSRLQTYLGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745309|gb|ABC42366.1| ribosomal protein subunit 2 [Orobanche bartlingii] Length = 187 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHDIRKWNPKMAPYISATCKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745295|gb|ABC42359.1| ribosomal protein subunit 2 [Orobanche latisquama] gi|83745297|gb|ABC42360.1| ribosomal protein subunit 2 [Orobanche latisquama] Length = 188 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 114/188 (60%), Gaps = 2/188 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L++T L +A ++ D+ +RG + L V TK++ Sbjct: 1 FGHGTRKWNPKMAPYISAKRKGIHITNLTRTARFLCEACDLVFDSASRGKQFLIVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD--LEELLNKENQGFTKKER 135 A+D V AA+++ + VN KWLGGM+TNW T + K RD +E+ K TK++ Sbjct: 61 AADLVALAARKARCHFVNKKWLGGMLTNWSTTKIRLHKFRDLRIEKKKIKLINHLTKRDV 120 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +R+ + + L GI+ M GLPD++ ++D ++E +A++E L IP + ++DTN +PD Sbjct: 121 AVAKRQLFRFQTYLGGIKYMTGLPDIVIIIDQHQEYMALRECITLGIPTICLIDTNCDPD 180 Query: 196 LVDYVIPG 203 L D IP Sbjct: 181 LADISIPA 188 >gi|83745313|gb|ABC42368.1| ribosomal protein subunit 2 [Orobanche hederae] gi|83745319|gb|ABC42371.1| ribosomal protein subunit 2 [Orobanche crenata] gi|83745321|gb|ABC42372.1| ribosomal protein subunit 2 [Orobanche amethystea] Length = 187 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 105/186 (56%), Gaps = 1/186 (0%) Query: 19 GHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQA 78 GH WNPKM YI R HI +L +T L +A ++ D +RG + L V TK + Sbjct: 2 GHDIRKWNPKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKT 61 Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLN 137 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 62 ANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKRDAAV 121 Query: 138 IERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLV 197 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 122 SKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDLA 181 Query: 198 DYVIPG 203 D IP Sbjct: 182 DLSIPA 187 >gi|83745329|gb|ABC42376.1| ribosomal protein subunit 2 [Orobanche ozanonis] Length = 187 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 FGHDIRKWNPKMAPYISANCKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ +VD + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|226968678|ref|YP_002808638.1| small subunit ribosomal protein S2 [Micromonas sp. RCC299] gi|226431156|gb|ACO55562.1| small subunit ribosomal protein S2 [Micromonas sp. RCC299] Length = 215 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LLE+GV FGH+ WN KM YI +N HI+DL QT+ L+KA V+ Sbjct: 4 LEALLEAGVHFGHQVGRWNSKMAPYIHETKNGVHILDLVQTLDDLEKARPVLKRA----K 59 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL--NK 125 +LFV T+ Q + + A++ + V+++W+GG++TNWKT+S +QKL L++ L + Sbjct: 60 NVLFVGTRPQIAPIIETTAQKVNGHYVSTRWVGGLLTNWKTMSMCLQKLNRLDKQLSEDG 119 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + G +KK L ++++R +L++ G+R + LPDL+ +V EK A+ E +RL IP + Sbjct: 120 KASGLSKKAILQLKKQRARLEKFFGGLRGLSELPDLVVIVGQPHEKNAVNECQRLGIPTI 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 ++D+N +P + Y I NDDS+RS+ + + + Sbjct: 180 TLLDSNCDPTMSTYGITANDDSTRSVEIILESL 212 >gi|83745444|gb|ABC42429.1| ribosomal protein subunit 2 [Phelipanche bungeana] Length = 187 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WN KM YI RN HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNLKMAPYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL E + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKMGRFKRLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ ++D + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745432|gb|ABC42423.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 187 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + Sbjct: 1 LGHDIRKWNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERL 136 ++ V AA ++ +CVN KWLGG +TNW T + + + RDL + K++ Sbjct: 61 TANSVACAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKHLPKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+ + GI+ M GLPD++ ++D + E A++E L IP + ++DTN +PDL Sbjct: 121 VSKRQLSRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADLSIPA 187 >gi|83745291|gb|ABC42357.1| ribosomal protein subunit 2 [Conopholis americana] Length = 187 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R H +L++T L +A ++ D + G + L V TK + Sbjct: 1 FGHGTRKWNPKMAPYILAKRKGIHFSNLTRTARFLSEACDLVFDAASMGKQFLIVDTKKK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A+D V AA ++ +CVN KWL GM+TNW T + K RD E KK+ Sbjct: 61 AADSVEWAAIKARCHCVNKKWLCGMLTNWSTTETLLNKFRDLRMEQKTGRLNRLKKKDVA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ +L+ L GI+ M LPD++ +VD + + A++E L IP + ++DTN +PDL Sbjct: 121 VVKRQLARLQAYLYGIKYMTRLPDIVIIVDQHEDYKALRECITLGIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|195928743|gb|ACG56051.1| ribosomal protein subunit 2 [Agalinis laxa] Length = 184 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 69/184 (37%), Positives = 107/184 (58%), Gaps = 2/184 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++LE+GV FGH WNPKM YI +R HI +L++T L +A ++ D + G Sbjct: 2 LEEMLEAGVHFGHGIKKWNPKMAPYISAKRKGNHITNLTRTARFLSEACNLVFDAASSGK 61 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKE 126 + L V TK++A V AA ++ +CVN KWLGGM+TNW T +QK RD E Sbjct: 62 QFLIVGTKNKA-HLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKTGR 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 K++ ++R+ +L+ L GI+ M GLPD++ ++D + E A++E L IP + Sbjct: 121 LNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEEYTALRECITLGIPTIC 180 Query: 187 VVDT 190 ++DT Sbjct: 181 LIDT 184 >gi|26554414|ref|NP_758348.1| 30S ribosomal protein S2 [Mycoplasma penetrans HF-2] gi|81747387|sp|Q8EUG1|RS2_MYCPE RecName: Full=30S ribosomal protein S2 gi|26454424|dbj|BAC44752.1| ribosomal protein S2 [Mycoplasma penetrans HF-2] Length = 367 Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 88/254 (34%), Positives = 142/254 (55%), Gaps = 9/254 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ +L+E+G G WNPKM+++I+ ++ N HIIDL TV L A + D V Sbjct: 103 VSVNKLMETGAHIGLTTRKWNPKMKKFIYTKKGNNHIIDLLHTVISLNVAYNFLLDLVKA 162 Query: 66 GGR-----ILFVATK-SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 +L V T+ + V E AKRS + +N +WLGG +TN+ T+++S+ K +L Sbjct: 163 NSNSESSPVLIVGTRGKTIKNHVKEQAKRSHAFYINERWLGGTLTNFSTITKSVAKFNNL 222 Query: 120 EEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + N E +TKKE++ +++K +K + GIR M LP ++ + D K+AI+EAR Sbjct: 223 ILIHKNGEINKYTKKEQVELKKKTEKYAKYFSGIRTMKELPKVIILTDPEINKIAIKEAR 282 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGAD 236 L IP++A+ +TN+NPDLVDYVIP N+ S +S+ L L+ A + G+ + + + Sbjct: 283 NLGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLLCDAVAEAKGLPKAFAEKKDE 342 Query: 237 TKSAGETVVHSKEG 250 E + E Sbjct: 343 EILLPEVIKRKPEN 356 >gi|187763100|ref|YP_001876575.1| ribosomal protein S2 [Welwitschia mirabilis] gi|163311630|gb|ABY26788.1| ribosomal protein S2 [Welwitschia mirabilis] Length = 239 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 2/219 (0%) Query: 16 VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 V G++ W+ Y R N HII+L QT L + ++ + IL V T+ Sbjct: 19 VHLGNKKNKWSLDRASYSLYRRKNRHIINLVQTAHFLSETCNLLFKAARKRKEILIVGTR 78 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE--NQGFTKK 133 +D V AAK++ + VN KW GG++TNW T + +++ R+L++ + ++ TKK Sbjct: 79 RYIADLVASAAKKAQCHYVNYKWQGGLLTNWSTTKERLKRFRNLKQKYDSGLFHRRRTKK 138 Query: 134 ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSN 193 E IE++ + L + L GI M LPD++ +VD +E A++E R LRIP +++VDTN + Sbjct: 139 EIALIEKQLELLYQYLKGILYMKKLPDIVIIVDQQKESTAVRECRALRIPTISLVDTNCD 198 Query: 194 PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 PDLVD IP NDD+ S+ L + + SA G Sbjct: 199 PDLVDIPIPANDDAPGSVRLILNRLMSAVSAGYKTTQQQ 237 >gi|308234641|ref|ZP_07665378.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14018] Length = 227 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 92/227 (40%), Positives = 140/227 (61%), Gaps = 2/227 (0%) Query: 42 IIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 II+L +++ M+ KA I TVA G +LFV TK QA + V A R V+ +WLGG Sbjct: 1 IINLFKSLDMIDKAYDFIKQTVAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVSERWLGG 60 Query: 102 MMTNWKTVSQSIQKLRDLEELL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 M+TN++TVS +++L++LEE+ + G TKKE L +ER++DKL + L GIR+M P Sbjct: 61 MLTNFQTVSTRVKRLKELEEMDFTDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTP 120 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 MFVVD N+E LA++EA +L IP+VA+VDTN++PD V+Y IP NDD+ R + L L+A Sbjct: 121 SAMFVVDINKEALAVEEAHKLGIPVVAIVDTNTDPDSVEYPIPANDDAIRGVELLTSLMA 180 Query: 220 SAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLD 266 A +G+ + S + + ++ + +E QS + + + Sbjct: 181 DAVAEGLLERAGKGAKSEGSDAQPMAAWEKELLTKETEQSEDEAKAE 227 >gi|45644740|gb|AAS73128.1| predicted 30S ribosomal protein S2 [uncultured marine gamma proteobacterium EBAC20E09] Length = 277 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 91/252 (36%), Positives = 146/252 (57%), Gaps = 4/252 (1%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M++YI+ R II+L T L A + D ++G +ILFV TK AS + E A Sbjct: 1 MDQYIYDTRKQISIINLELTQECLSAAASKVEDICSKGNKILFVGTKRSASKTIKEEASN 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE-NQGFTKKERLNIERKRDKLKR 147 ++ +WLGG +TNWKT+ SI++L D+EE+++ KKE + I+++ KL+ Sbjct: 61 IGLPYIDKRWLGGTLTNWKTIRGSIRRLLDIEEMISSGRINKLIKKEAVEIQKEHAKLEA 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 ++ GI+DM GLPD +FV+D EK+A+ EA+++ IPI+A+VDTNS+PD +D +IPGNDD+ Sbjct: 121 SVGGIKDMKGLPDAIFVIDVKYEKIAVLEAKKMGIPIIALVDTNSDPDGIDMIIPGNDDA 180 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEE--DSQSSESSVL 265 RSI L +++ A GI ++ + V ++ +L+E ++ E+ Sbjct: 181 IRSIRLITKVISDACARGIESAQGFVPKSDSPIIKK-VKKEDVQKLDEVMEAPVEETQES 239 Query: 266 DGQEVAVVPELM 277 D E + E Sbjct: 240 DKAEEVLTEEAQ 251 >gi|309787158|ref|ZP_07681770.1| ribosomal protein S2 [Shigella dysenteriae 1617] gi|308924736|gb|EFP70231.1| ribosomal protein S2 [Shigella dysenteriae 1617] Length = 193 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 89/193 (46%), Positives = 128/193 (66%), Gaps = 1/193 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M +AL ++ +R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV Sbjct: 1 MFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVR 60 Query: 111 QSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 QSI++L+DLE + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + Sbjct: 61 QSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADH 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ Sbjct: 121 EHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQD 180 Query: 230 HSYMGADTKSAGE 242 + ++ E Sbjct: 181 LASQAEESFVEAE 193 >gi|300725979|ref|ZP_07059438.1| ribosomal protein S2 [Prevotella bryantii B14] gi|299776693|gb|EFI73244.1| ribosomal protein S2 [Prevotella bryantii B14] Length = 193 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 79/191 (41%), Positives = 120/191 (62%), Gaps = 1/191 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + QLL++G FGH WNP M YIF ERN HIIDL++TV + +A +V+ Sbjct: 1 MSRTNFDQLLQAGCHFGHLKRKWNPAMAPYIFMERNGIHIIDLNKTVAKIDEAAEVLKGI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE- 121 G +ILFVATK QA D V E A V +W GGM+TN+ T+ ++++K+ ++++ Sbjct: 61 AKSGKKILFVATKKQAKDIVAEKAASVNMPYVIERWPGGMLTNFPTIRKAVKKMTNIDKL 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + + +K+E L I R+R KL++ L I D+ LP +FV+D +E +A++EA+RL Sbjct: 121 MNDGTFSNLSKRELLQITRQRAKLEKNLGSIADLTRLPSALFVIDVMKEHIAVKEAQRLG 180 Query: 182 IPIVAVVDTNS 192 IP+ A+VDTNS Sbjct: 181 IPVFAIVDTNS 191 >gi|240047248|ref|YP_002960636.1| 30S ribosomal protein S2 [Mycoplasma conjunctivae HRC/581] gi|239984820|emb|CAT04808.1| 30S ribosomal protein S2 [Mycoplasma conjunctivae] Length = 314 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 90/265 (33%), Positives = 149/265 (56%), Gaps = 4/265 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+G FGH++ W+PKM YI +RN THIID+ +T +L+ A ++++ Sbjct: 30 PIVSKQKLLEAGAYFGHKSSQWHPKMAPYILKRKRNETHIIDVLKTQKILEIAYKLVNKF 89 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA + E A R+ V+ +WLGG +TN +T+ ++ + +LE+ Sbjct: 90 AQKGATFLFVGTKKQAKKVIEEQAIRTNSIYVSDRWLGGTITNSRTILSRLKTMEELEKQ 149 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGG---LPDLMFVVDTNREKLAIQEARR 179 + +G+TKKE L + KL++ L+GIR++ +M V D N++ +A++EAR+ Sbjct: 150 AERNFEGYTKKEGLLKHKTLAKLQKNLNGIRNLKENSINSLVMLVADPNKDIIAVKEARK 209 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 I I+ ++DTN++P LVD+ IP NDDS++S+ L ++A A + + Sbjct: 210 KGIKIIGIIDTNTDPALVDFGIPANDDSTKSLTLIFTILADAIAVAKGGKQIFAYQSDDK 269 Query: 240 AGETVVHSKEGMQLEEDSQSSESSV 264 +E QL S E S Sbjct: 270 VILPEDPEREQKQLRFKKTSFEKST 294 >gi|161612587|ref|YP_001586552.1| hypothetical protein SPAB_00278 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161361951|gb|ABX65719.1| hypothetical protein SPAB_00278 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 193 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 91/193 (47%), Positives = 130/193 (67%), Gaps = 1/193 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M +AL ++ AR G+ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV Sbjct: 1 MFNEALAELNKISARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVR 60 Query: 111 QSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 QSI++L+DLE + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + Sbjct: 61 QSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADH 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 E +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ Sbjct: 121 EHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQD 180 Query: 230 HSYMGADTKSAGE 242 + ++ E Sbjct: 181 LASQAEESFVEAE 193 >gi|83745299|gb|ABC42361.1| ribosomal protein subunit 2 [Orobanche colorata] Length = 187 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L +T L +A ++ D + G + L V TK Q Sbjct: 1 FGHDIKKWNPKMAPYISAKRKGIHITNLIRTARFLSEACNLVFDAASMGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERL 136 A+ V AAK++ +CVN KW GGM+TNW + K DL+ + + KK+ Sbjct: 61 AASLVARAAKKAECHCVNKKWFGGMLTNWSLTEMRLYKFGDLKMKKKMGSLKSLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+++L GI+ M LPD++ +VD + E A++E L+IP + ++DTN +PDL Sbjct: 121 VGKRQLSRLQKSLGGIKYMTKLPDIVIIVDQHEEYTALRECITLKIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 IP Sbjct: 181 ATISIPA 187 >gi|115443588|ref|YP_778607.1| 30S ribosomal protein S2 [Bigelowiella natans] gi|122233783|sp|Q06J20|RR2_BIGNA RecName: Full=30S ribosomal protein S2, chloroplastic gi|110810233|gb|ABG91439.1| 30S ribosomal protein S2 [Bigelowiella natans] Length = 281 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 122/224 (54%), Gaps = 5/224 (2%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI--SDTVARGG 67 ++L++GV FGH+ WNPKM +I+ + HIID+ Q+ L+KA +++ Sbjct: 40 KMLKAGVHFGHKIKKWNPKMSPFIYQKLQGIHIIDIIQSYTYLKKACKLVYSKSLTDNYN 99 Query: 68 RILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 LFV TK Q + + A R + +N+KWL GM+TNW+ ++SI L+ L+ Sbjct: 100 TFLFVGTKKQSPIPNSIFYHASRCNSFYINNKWLSGMLTNWENTTRSINTLKYLKVYQKT 159 Query: 126 E-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + K I++K+++L++ GI++M LP + +V + E A +E R+L I Sbjct: 160 NMFSKLSMKTHSIIDKKKNRLEKYFGGIQNMTSLPSTVILVGQHNEITASKECRKLGINN 219 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 + ++DT+ NP+ VD IP NDDSS S+ L + A G + Sbjct: 220 ITILDTDCNPEFVDLFIPANDDSSSSLNLILGELQVAINIGRQK 263 >gi|323444987|gb|EGB01841.1| hypothetical protein AURANDRAFT_35694 [Aureococcus anophagefferens] Length = 175 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 70/174 (40%), Positives = 106/174 (60%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + I QLL++GV FGH+ WNPKM YI+ ERN HI+DL QT +LQ+A + Sbjct: 1 MAEIKIAQLLKAGVHFGHKTPRWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDFVQLA 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G LFV TK QA++ + E A R+ + +N +W GG++TNW+TV IQ L LE Sbjct: 61 AEQGKTFLFVGTKPQAAELIKEEALRADSFYINHRWYGGLLTNWQTVKGRIQTLHTLEAQ 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 KKE ++ ++ KL+ L+G+++M G+PD+M V+D N E A+++ Sbjct: 121 EETIFPTLPKKESASLRKELTKLRSQLNGVKNMSGVPDIMIVIDQNYELTAVRK 174 >gi|89243570|gb|ABD64904.1| ribosomal protein subunit 2 [Boschniakia rossica] Length = 187 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 1/186 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI +R HI +L+ T L +A ++ D +RG + LFV TK++ Sbjct: 1 FGHGTRKWNPKMAPYISAKRKGIHITNLTITARFLIEACNLVFDAASRGKKFLFVGTKNK 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKK-ERL 136 A+D V AA R+ +CVN KWLGGM+TNW + KLRDL N KK + Sbjct: 61 AADSVAWAAIRARCHCVNKKWLGGMLTNWSITEMRLHKLRDLIIEKNMGRLSHFKKRDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ L+ L GI+ M LP+++ ++D E LA+QE L IP + ++DTN +PDL Sbjct: 121 LVKRQLSHLQTYLGGIKYMTELPNIVIIIDQQEEFLALQECITLGIPTICLIDTNGDPDL 180 Query: 197 VDYVIP 202 D +P Sbjct: 181 ADIFVP 186 >gi|163785816|ref|ZP_02180298.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] gi|159878914|gb|EDP72936.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1] Length = 251 Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 85/219 (38%), Positives = 141/219 (64%), Gaps = 1/219 (0%) Query: 52 LQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQ 111 ++A + + D VA GG ILFV TK QA D + E A+R + +N +WLGG++TN++TV + Sbjct: 1 FKQAWEFVRDEVAAGGDILFVGTKKQAQDIIEEEAQRCGAFYINQRWLGGLLTNFQTVRK 60 Query: 112 SIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 SI+KL+ LE + + KKE + I+++++KL+R L GI++M +PD+++VVDT RE Sbjct: 61 SIEKLKRLERMEAEGAFEILPKKEVVKIKKQKEKLERFLKGIKEMEKMPDVIYVVDTVRE 120 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +LA++EA++L IP+VA+ D+N +PDL+DY IPGNDD+ ++I L +A A ++G + + Sbjct: 121 ELAVKEAKKLGIPVVAIADSNCDPDLIDYPIPGNDDAIKAIKLITSKIADAVVEGRSLRE 180 Query: 231 SYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +GA E + K + + + S ++G Sbjct: 181 KEVGAVEVEDVEAELMKKAKEEGVAEVGPAVESGVNGAN 219 >gi|332287006|ref|YP_004421907.1| 30S ribosomal protein S2 [Chlamydophila psittaci 6BC] gi|325507145|gb|ADZ18783.1| 30S ribosomal protein S2 [Chlamydophila psittaci 6BC] Length = 245 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 85/233 (36%), Positives = 136/233 (58%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ YIF E+N +II+L++T+ L+KAL + + ILFV TK QA + EAA Sbjct: 1 MKLYIFEEKNGLYIINLAKTLYQLRKALPQVCKVIKENKPILFVGTKKQAKCVIKEAAIE 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 + +Y V +WLGGM+TN T+ SI+ L +E+ L + + TKKE + ++ KL + Sbjct: 61 AGEYFVAERWLGGMLTNMTTIRNSIKTLDKIEKDLTQNSSYLTKKEIALLAKRHQKLLKN 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 L+GIR + P L+ VVD + EK+A+ EA++L IP++A+VDTN +P +DYVIP NDDS Sbjct: 121 LEGIRYLKKAPGLVIVVDPSYEKIAVAEAKKLGIPVLALVDTNCDPTPIDYVIPCNDDSL 180 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSE 261 +SI L + + ID + + + K+ + ++D++ + Sbjct: 181 KSIRLIISTIKDSIIDTKKKLGIEIVSPIKTLDVQESEDSDIYATDDDNRQED 233 >gi|83745476|gb|ABC42439.1| ribosomal protein subunit 2 [Phelipanche bungeana] gi|83745478|gb|ABC42440.1| ribosomal protein subunit 2 [Phelipanche bungeana] gi|83745480|gb|ABC42441.1| ribosomal protein subunit 2 [Phelipanche bungeana] gi|83745482|gb|ABC42442.1| ribosomal protein subunit 2 [Phelipanche bungeana] Length = 187 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALLECLHLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745498|gb|ABC42450.1| ribosomal protein subunit 2 [Phelipanche lavandulacea] Length = 187 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADIPIPA 187 >gi|83745361|gb|ABC42392.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 + V +AAK++ + VN+KW GGM+TNW +QK +D + E +KK+ Sbjct: 61 TVNLVEQAAKKAGCHFVNTKWTGGMLTNWSITKARLQKFKDLIIEQEAGRIDCLSKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ ++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSHFQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|12545419|ref|NP_074969.1| ribosomal protein S2 [Euglena longa] gi|14286154|sp|P24352|RR2_ASTLO RecName: Full=Plastid 30S ribosomal protein S2 gi|12329883|emb|CAC24580.1| ribosomal protein S2 [Euglena longa] Length = 235 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 118/218 (54%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+++ + + GH + WNPKM++Y+FC++N +IIDL QTV L+K I G Sbjct: 7 IKEMFFARLHLGHFSTKWNPKMKKYVFCKQNGKYIIDLIQTVYYLKKVCNFIKKLSIEGK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV+ + D + A + + + WLGG TNW T I KL K Sbjct: 67 KILFVSARMLIVDKLKHFANVTKSFYITEDWLGGTFTNWITTKGCIDKLNYYSVDGLKLY 126 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 TK+ERL +++ KL + GI+ M +PD++F++ + K AI E +L +P +++ Sbjct: 127 DSLTKRERLISRKQQSKLAKYYFGIKQMKKIPDVVFLIGQSDLKKAIGECLKLNVPTISI 186 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +DT+ +P + ++ IP NDDS SI D V + G Sbjct: 187 LDTDCDPTMTNFFIPANDDSISSIFFILDFVKYYMLKG 224 >gi|83745363|gb|ABC42393.1| ribosomal protein subunit 2 [Phelipanche arenaria] gi|83745365|gb|ABC42394.1| ribosomal protein subunit 2 [Phelipanche arenaria] gi|83745367|gb|ABC42395.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 + V +AAK++ + VN KW GGM+TNW +QK +D + E +KK+ Sbjct: 61 TVNLVEQAAKKAGCHFVNKKWTGGMLTNWSITKARLQKFKDLIIEQEAGRIDCLSKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ ++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSHFQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|321310950|ref|YP_004193279.1| 30S ribosomal protein S2 [Mycoplasma haemofelis str. Langford 1] gi|319802794|emb|CBY93440.1| ribosomal protein S2 [Mycoplasma haemofelis str. Langford 1] Length = 262 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 139/249 (55%), Gaps = 6/249 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ +L+E G R WNPKM+ YI + ++ D + L A I D Sbjct: 1 MSVVSVEKLVECECNLGLRLRYWNPKMKDYISGKERGRYMFDPNMISEFLGNAYGYILDL 60 Query: 63 VARGGRILFVAT-KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 V G I+FV S + EAA R + +WLGG++TN+KT+S +I+KL +L E Sbjct: 61 VKAGADIMFVGVKNKLTSGIIKEAASRVEALYLTQRWLGGLLTNFKTISLNIKKLNELTE 120 Query: 122 LLN--KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 LL + +G+TKKE + +++DKL++ G++++ LP+L+ V + + A+QEA++ Sbjct: 121 LLENPELQEGYTKKEIIQFSKQKDKLEKFYGGVKNLQRLPNLLVVFNPVEDAAAVQEAKK 180 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A+ + N++PD VD+VIPGN+ S +S+ L +L+ A + Q KS Sbjct: 181 VGIPVIALSNINTDPDQVDFVIPGNNKSMKSVYLIANLLCDAIAE---IQGKDTVVAHKS 237 Query: 240 AGETVVHSK 248 E ++ + Sbjct: 238 DAEIIIPEE 246 >gi|83745357|gb|ABC42390.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 + V +A K++ + VN KW GGM+TNW +QK +D + E +KK+ Sbjct: 61 TVNLVEQATKKAGCHFVNKKWTGGMLTNWSITKARLQKFKDLIIEQEAGRIDCLSKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ L++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSHLQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745359|gb|ABC42391.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 187 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGHR+ WNPKM YI ER + HII+L++T L +A ++ +RG + L V+TK Sbjct: 1 FGHRSKEWNPKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVSTKRS 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 + V +AAK++ + VN KW GGM+TNW +QK +D + E +KK+ Sbjct: 61 TVNLVEQAAKKAGCHFVNKKWTGGMLTNWSITKARLQKFKDLIIEQEAGRIDCLSKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ ++ L GIR+M LPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSHFQKNLGGIRNMSELPDIVIILCQNEEYKALQECITLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|159901960|gb|ABX10691.1| 30S ribosomal protein S2 [uncultured planctomycete 8FN] Length = 228 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 122/204 (59%), Gaps = 1/204 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI+ +N HIID+ +TV L +A + ++ + G ILFV TK QA + A R Sbjct: 1 MSPYIYGRKNAVHIIDIRETVRGLLRAKKYLAQVASGGSLILFVGTKRQAGSIIEREASR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERLNIERKRDKLKR 147 + V+ +WLGG +TN++T+ + +L +LE++ ++KK + + R+ K+ R Sbjct: 61 AGMPFVSERWLGGALTNFRTIRSRMSRLEELEKIRESDGLAQYSKKMQSALNREYRKMYR 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 L+G+R+M +P+ + +VD N+EK +++EA+ L I VA++DT+ +P+LVD IPGNDD Sbjct: 121 NLNGLRNMNRMPECLVIVDPNKEKNSLREAKALGISTVALIDTDCDPELVDLPIPGNDDG 180 Query: 208 SRSIALFCDLVASAAIDGIARQHS 231 RSI L +A A I G + Sbjct: 181 IRSIDLIVKNLADAVIAGTKSIEA 204 >gi|262190232|ref|ZP_06048506.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae CT 5369-93] gi|262033877|gb|EEY52343.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae CT 5369-93] gi|327484776|gb|AEA79183.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae LMA3894-4] Length = 194 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 89/192 (46%), Positives = 127/192 (66%), Gaps = 1/192 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M +AL ++ + G++LFV TK AS+ V EAA S QY VN++WLGGM+TNWKTV Sbjct: 1 MFNEALAELAKVGEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVR 60 Query: 111 QSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 QSI++L++LE + TKKE L R+ +KL+++L GI+DMGGLPD +FV+D + Sbjct: 61 QSIKRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADH 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 E +AI+EA L IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A A +G + Sbjct: 121 EHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKD 180 Query: 230 HSYMGADTKSAG 241 + + Sbjct: 181 VAAVAEKDGFVE 192 >gi|83745392|gb|ABC42406.1| ribosomal protein subunit 2 [Orobanche rosmarina] gi|83745394|gb|ABC42407.1| ribosomal protein subunit 2 [Orobanche rosmarina] gi|83745398|gb|ABC42409.1| ribosomal protein subunit 2 [Orobanche rosmarina] gi|83745400|gb|ABC42410.1| ribosomal protein subunit 2 [Orobanche rosmarina] Length = 187 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMRPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|153805630|ref|YP_001382215.1| ribosomal protein S2 [Leptosira terrestris] gi|209573609|sp|A6YGD8|RR2_LEPTE RecName: Full=30S ribosomal protein S2, chloroplastic gi|134270161|gb|ABO69350.1| ribosomal protein S2 [Leptosira terrestris] Length = 265 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 83/225 (36%), Positives = 130/225 (57%), Gaps = 1/225 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I+ + E+G+ G WNPKM YI E H+I+L QT+ L++ + +G Sbjct: 37 IKSMFEAGLHRGDLTQNWNPKMAPYIRGEFKGKHVINLVQTLLYLEEVCAFLEKEALKGK 96 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + LFV T++ +S V + A R+ + VN KWLGGM+TNWKT + +++L L L Sbjct: 97 KFLFVGTQTHSSVVVKKTAIRTNSFFVNEKWLGGMLTNWKTAKRLVRRLNFLLMLEKTTY 156 Query: 128 -QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 Q +KKER + +++++KLK+ G+R M LP ++ + N+E A++E +RL+IP V Sbjct: 157 IQKLSKKERNDFKKEKNKLKKYFLGLRSMQKLPGVVILASQNQEMNALKECQRLKIPSVT 216 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 ++DTNS+P L DY IPGNDDS +S+ A G ++ Sbjct: 217 ILDTNSDPTLSDYFIPGNDDSYKSLNFLFKFFRLAIKKGRNKRQQ 261 >gi|83745464|gb|ABC42433.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 187 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSVTEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745474|gb|ABC42438.1| ribosomal protein subunit 2 [Phelipanche bungeana] Length = 187 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ Y+ ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYVSAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALLECLHLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745492|gb|ABC42447.1| ribosomal protein subunit 2 [Orobanche gratiosa] Length = 187 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RGDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745466|gb|ABC42434.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745468|gb|ABC42435.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745486|gb|ABC42444.1| ribosomal protein subunit 2 [Orobanche gratiosa] gi|83745488|gb|ABC42445.1| ribosomal protein subunit 2 [Orobanche gratiosa] gi|83745494|gb|ABC42448.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745500|gb|ABC42451.1| ribosomal protein subunit 2 [Phelipanche lavandulacea] gi|83745502|gb|ABC42452.1| ribosomal protein subunit 2 [Phelipanche lavandulacea] Length = 187 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745383|gb|ABC42402.1| ribosomal protein subunit 2 [Phelipanche pulchella] Length = 187 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +Q+ R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQRFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP + ++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALHECLNLGIPTICLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745396|gb|ABC42408.1| ribosomal protein subunit 2 [Orobanche rosmarina] Length = 187 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMRPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N E A+QE L IP ++++DT+S+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTISLIDTDSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|255024628|ref|ZP_05296614.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J1-208] Length = 197 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 75/171 (43%), Positives = 116/171 (67%), Gaps = 1/171 (0%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A + + + G ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ Sbjct: 1 AFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQ 60 Query: 115 KLRDLEELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 L+ +E + + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A Sbjct: 61 HLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIA 120 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + EAR+L IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 121 VAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 171 >gi|302824463|ref|XP_002993874.1| hypothetical protein SELMODRAFT_137779 [Selaginella moellendorffii] gi|300138241|gb|EFJ05015.1| hypothetical protein SELMODRAFT_137779 [Selaginella moellendorffii] Length = 228 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 103/214 (48%), Gaps = 1/214 (0%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E+G FGH+ WNPKM + ER H ID +QT +A + +G + Sbjct: 15 EAGAHFGHQARRWNPKMAPHTPTERKGIHTIDPTQTARSSPEARDPAAGAAGKGKQFPIA 74 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTK 132 TK QA+D + AA R+ ++ N KWLGGM+TNW T+ + +L D E + N GF Sbjct: 75 GTKYQAADVIRSAAIRAQRHYANEKWLGGMLTNWSTMETRLHRLEDSEGKAQQLN-GFPD 133 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 + R+ + +R G R M LPD+ VD E AI+E IP + DT+ Sbjct: 134 RGAATSGRQSAQPRRDPAGTRYMKSLPDIATTVDQREEPTAIRECTAPGIPTTRLADTDC 193 Query: 193 NPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +PDL D IP NDD + + A +G Sbjct: 194 DPDLTDIPIPANDDPRAPTRRIPNKLTPAIREGR 227 >gi|83745385|gb|ABC42403.1| ribosomal protein subunit 2 [Phelipanche pulchella] gi|83745387|gb|ABC42404.1| ribosomal protein subunit 2 [Phelipanche pulchella] Length = 187 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+ E L IP + ++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFTALHECLNLGIPTICLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745462|gb|ABC42432.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 187 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLAKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|296399253|gb|ADH10428.1| ribosomal protein S2 [Selaginella moellendorffii] Length = 228 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 103/214 (48%), Gaps = 1/214 (0%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E+G FGH+ WNPKM + ER H ID +QT +A + +G + Sbjct: 15 EAGAHFGHQARRWNPKMAPHTPTERKGIHTIDPTQTARSSPEARDPAAGAAGKGKQFPIA 74 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTK 132 TK QA+D + AA R+ ++ N KWLGGM+TNW T+ + +L D E + N GF Sbjct: 75 GTKYQAADVIRSAAIRAQRHYANEKWLGGMLTNWSTMETRLHRLEDSEGKAQQLN-GFPD 133 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 + R+ + +R G R M LPD+ VD E AI+E IP + DT+ Sbjct: 134 RGAATSGRQSAQPRRDPAGTRYMKSLPDIATTVDQREEPTAIRECTAPGIPTTRLADTDC 193 Query: 193 NPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +PDL D IP NDD + + A +G Sbjct: 194 DPDLTDIPIPANDDPRAPTRRIPNKLTPAIREGR 227 >gi|237757013|ref|ZP_04585468.1| ribosomal protein S2 [Sulfurihydrogenibium yellowstonense SS-5] gi|237690831|gb|EEP59984.1| ribosomal protein S2 [Sulfurihydrogenibium yellowstonense SS-5] Length = 242 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 127/204 (62%), Gaps = 2/204 (0%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +AL +++ VA G ILF+ TK QA + + E AKR + VN KWLGGM TN+ TV +SI Sbjct: 1 QALDFVTEQVANGAEILFLGTKKQAQNIIEEEAKRCGAFYVNYKWLGGMFTNFATVKKSI 60 Query: 114 QKLRDLEELLNKE-NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 KLR L+++ + + KKE + ++++KL++ L GI DM +PD++FVVDT RE Sbjct: 61 AKLRKLQKMEAEGVFEVLPKKEARTLMKQKEKLEKYLKGIVDMDRVPDIIFVVDTVRENN 120 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS- 231 A+ EA +L + +VA+ DTN +PD +DY IPGNDD+ ++I L +A A I+G + S Sbjct: 121 AVTEANKLGVHVVAIADTNCDPDKIDYPIPGNDDAIKAIQLITSKIADAVIEGKKMRESI 180 Query: 232 YMGADTKSAGETVVHSKEGMQLEE 255 +TK+ E ++ E + E Sbjct: 181 GTAVETKTIEEELLARAEAANVVE 204 >gi|83745472|gb|ABC42437.1| ribosomal protein subunit 2 [Phelipanche oxyloba] Length = 187 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HII+L+QT L +A ++ +RG + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIINLTQTARFLYEACNLVFHAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQDEDFTALLECLNLGIPTICLIDTNSDPDL 180 Query: 197 VDYVIPG 203 + IP Sbjct: 181 ANISIPA 187 >gi|83745301|gb|ABC42362.1| ribosomal protein subunit 2 [Orobanche anatolica] gi|83745303|gb|ABC42363.1| ribosomal protein subunit 2 [Orobanche anatolica] Length = 187 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH WNPKM YI + HI +L T L +A ++ D + G + L V TK Q Sbjct: 1 FGHDIKKWNPKMAPYISAKHKGIHITNLIITARFLSEACNLVFDAASMGKQFLIVGTKKQ 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 A+ V AAK++ + VN KW GGM+TNW + K D + + + + KK Sbjct: 61 AAYLVARAAKKAQCHYVNKKWFGGMLTNWSLTEMRLYKFGDLIMKKKMRRFKSLPKKGAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 +R+ +L+++L GI+ M LPD++ ++D ++E A+QE L IP + ++DTN +PDL Sbjct: 121 VEKRQLSRLQKSLGGIKYMTKLPDIVIIIDQHKEYTALQECITLEIPTICLIDTNCDPDL 180 Query: 197 VDYVIPG 203 IP Sbjct: 181 ATISIPA 187 >gi|83745470|gb|ABC42436.1| ribosomal protein subunit 2 [Phelipanche oxyloba] Length = 187 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HII+L+QT L +A ++ +RG + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIINLTQTARFLYEACNLVFHAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E + KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKARRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQDEDFTALLECLNLGIPTICLIDTNSDPDL 180 Query: 197 VDYVIPG 203 + IP Sbjct: 181 ANISIPA 187 >gi|83745484|gb|ABC42443.1| ribosomal protein subunit 2 [Phelipanche hirtiflora] gi|83745496|gb|ABC42449.1| ribosomal protein subunit 2 [Phelipanche mutelii] Length = 187 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNEM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|147794704|emb|CAN73505.1| hypothetical protein VITISV_036349 [Vitis vinifera] Length = 194 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 6/182 (3%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKR-----SAQYCVNSKWLGGMMTNWKTVSQSIQKLRD- 118 RG + L V TK++A+D V AA + + + VN KWLGGM TNW T + K RD Sbjct: 67 RGKQFLIVGTKNKAADSVARAAIKARCHYARCHYVNKKWLGGMSTNWSTTETRLHKFRDL 126 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 E K++ ++R+ L+ L GI+ M GLPD++ +VD E A++E Sbjct: 127 RTEQKTGRLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECI 186 Query: 179 RL 180 L Sbjct: 187 TL 188 >gi|11466554|ref|NP_044803.1| ribosomal protein S2 [Reclinomonas americana] gi|2258384|gb|AAD11918.1| ribosomal protein S2 [Reclinomonas americana] Length = 212 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 74/221 (33%), Positives = 123/221 (55%), Gaps = 22/221 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ +L +GV GH WN + Y+ +R N HIIDL +T+ +L+K L +S+ + Sbjct: 8 KTSLAIMLRNGVHIGHHVNKWNSETGPYLLGQRGNIHIIDLEKTLFLLRKTLSFVSELSS 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILF++T S+ V E AK+ Q VN +W+GG++TN+ + + ++ + E Sbjct: 68 RGGSILFISTMYDFSNIVEENAKKCGQPYVNRRWIGGLLTNFTHIKKKLRNPKGCSE--- 124 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K + GIR+M LP +F+V N + A+ EA +L IP Sbjct: 125 -------------------KFIFSTQGIRNMERLPSAIFIVGVNNCRTALLEASKLNIPT 165 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 +A+VD+N++ + Y IPGNDDS ++ L+C L+++A + G Sbjct: 166 IAIVDSNTSIQDITYPIPGNDDSILAVNLYCQLISNAILSG 206 >gi|165910467|gb|ABY73988.1| ribosomal protein S2 [Cuscuta applanata] Length = 177 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 30 ERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS 89 YI +R HI +L++T +L +A ++ D +RG + L V T + A + V A+ R+ Sbjct: 2 APYISAKRKGIHITNLTRTARLLSEACDLVFDAASRGKKFLIVGTNNVADEAVARASIRA 61 Query: 90 AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERLNIERKRDKLKRA 148 + VN KWLGGM+TNW T +QK RDL K KKE ++R+ +L++ Sbjct: 62 RCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMKQKKGGLNNLPKKEATMLKRQLARLQKY 121 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 L GI+ M GLPD++ ++D ++E A+QE R L IP ++++DTN +P+L D IP N Sbjct: 122 LGGIQYMTGLPDIVIIIDQHKESTALQECRNLGIPTISLIDTNCDPNLSDIPIPAN 177 >gi|47569105|ref|ZP_00239794.1| ribosomal protein S2 [Bacillus cereus G9241] gi|47554267|gb|EAL12629.1| ribosomal protein S2 [Bacillus cereus G9241] Length = 177 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 71/173 (41%), Positives = 116/173 (67%), Gaps = 1/173 (0%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 + D A GG ILFV TK QA + + E A R+ Y VN +WLGG +TN++T+ + I++L+D Sbjct: 1 MRDISAEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKD 60 Query: 119 LEELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +E + + + KKE + ++++ ++L++ L GI+DM GLP +FVVD +E++A+ EA Sbjct: 61 IERMQEDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEA 120 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 R+L IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ + Sbjct: 121 RKLHIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 173 >gi|40786903|gb|AAR89979.1| ribosomal protein subunit B [Blochmannia endosymbiont of Polyrhachis foreli] Length = 177 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 78/174 (44%), Positives = 115/174 (66%), Gaps = 1/174 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF RN HII+L +T+PM AL ++ + G+ILFV TK A Sbjct: 4 HQTRYWNPKMKPFIFGVRNKIHIINLEKTLPMFNHALSELNKISSNKGKILFVGTKRAAR 63 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNI 138 + + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + Sbjct: 64 EAIKNTAISCNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQYKDGTFTKLTKKEALIL 123 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 +R+ +KL+++L GI++M GLPD +F++ E +AI+EA L IP+ ++VDT S Sbjct: 124 KRELEKLEKSLGGIKNMNGLPDAIFIIGAAHECIAIKEANNLGIPVFSIVDTCS 177 >gi|213418255|ref|ZP_03351321.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 161 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 80/157 (50%), Positives = 108/157 (68%), Gaps = 1/157 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKE 126 +ILFV TK AS+ V EAA Q+ VN +WLGGM+TNWKTV QSI++L+DLE + Sbjct: 61 KILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMF 163 + TKKE L R+ +KL+ +L GI+DMGGLPD + Sbjct: 121 FEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALV 157 >gi|12044922|ref|NP_072732.1| 30S ribosomal protein S2 [Mycoplasma genitalium G37] gi|255660390|ref|ZP_05405799.1| 30S ribosomal protein S2 [Mycoplasma genitalium G37] gi|1350974|sp|P47316|RS2_MYCGE RecName: Full=30S ribosomal protein S2 gi|1045746|gb|AAC71288.1| ribosomal protein S2 [Mycoplasma genitalium G37] gi|166078998|gb|ABY79616.1| ribosomal protein S2 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 284 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 131/246 (53%), Gaps = 2/246 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVA 64 ++ +L E G WNPKM +I ER N ++ L L+ A I D V Sbjct: 12 VSLNKLSEMRTNIGMVKRYWNPKMGFFIEPERKHNNDLLKLDLQYQALKTAYNFIKDVVK 71 Query: 65 RGGRILFVATKS-QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G+ILFV TK+ V++ AKR + +WLGG +TN+KT+S SI KL L E Sbjct: 72 NHGQILFVGTKNDYVKKLVIDIAKRVNVAYITQRWLGGTLTNFKTLSISINKLNKLVEQQ 131 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + TKKE L + R+ ++L++ G++++ LP+L+ + D EK A+ EA L+IP Sbjct: 132 KQNANDLTKKENLLLSREIERLEKFFGGVKNLKRLPNLIVIDDPVYEKNAVLEANSLKIP 191 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +VA+ +TN+NP+LVD++IP N+ +S L +L+A A + + Y + Sbjct: 192 VVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAIAEAKGFETLYAYKPDEQIQIE 251 Query: 244 VVHSKE 249 + +E Sbjct: 252 IPPKQE 257 >gi|83745408|gb|ABC42413.1| ribosomal protein subunit 2 [Phelipanche tunetana] Length = 187 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGRQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN-QGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+L E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRNLIIEQKAERLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ + D + + A+ E L IP + ++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIIRDQDEDFTALHECLNLGIPTICLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745410|gb|ABC42414.1| ribosomal protein subunit 2 [Phelipanche cf. tunetana Schonswetter & Tribsch 10691] Length = 187 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HIIDL++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIIDLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + +VDTN++PDL Sbjct: 121 VVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLVDTNADPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|325278096|ref|ZP_08143612.1| 30S ribosomal protein S2 [Pseudomonas sp. TJI-51] gi|324096773|gb|EGB95103.1| 30S ribosomal protein S2 [Pseudomonas sp. TJI-51] Length = 194 Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 83/174 (47%), Positives = 112/174 (64%), Gaps = 1/174 (0%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 AL + +ILFV TK A V E A R V+ +WLGGM+TN+KT+ SI Sbjct: 1 DALSFVERLAQGKNKILFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASI 60 Query: 114 QKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 ++LRDLE + + TKKE L R +KL R+L GI+DMGGLPD +FV+D + E++ Sbjct: 61 KRLRDLETQAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERI 120 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 AI EA +L IP++ VVDTNS+P+ VDY+IPGNDD+ R+I L+ +A A I G Sbjct: 121 AITEANKLGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRGR 174 >gi|83745490|gb|ABC42446.1| ribosomal protein subunit 2 [Orobanche gratiosa] Length = 187 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM+ YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 1 FGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D N + A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILDQNEDFKALQERINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745377|gb|ABC42399.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCPPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745375|gb|ABC42398.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKARCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745390|gb|ABC42405.1| ribosomal protein subunit 2 [Orobanche rosmarina] Length = 187 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 1/185 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H + WNPKM YI ER + HII+L++T L +A ++ +RG + L V T Sbjct: 3 HHSRKWNPKMRPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKIRD 62 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNI 138 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ + Sbjct: 63 DLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAAVV 122 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVD 198 +R+ + ++ L GI+ M GLPD++ ++D N E A+QE L IP ++++DTNS+PDL D Sbjct: 123 KRQLSRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTISLIDTNSDPDLAD 182 Query: 199 YVIPG 203 IP Sbjct: 183 ISIPA 187 >gi|83745381|gb|ABC42401.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|16603934|gb|AAL27213.1| ribosomal protein subunit 2 [Comarostaphylis arbutoides] Length = 174 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 1/174 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADSVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + K RD E + K++ ++R+ L+ L GI+ M GLPD++ ++D ++ Sbjct: 61 KRLHKFRDLRMEQKMGRLERLPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 E A++E L IP + ++DTN +PDL+D IP NDD+ SI L + + A Sbjct: 121 EYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLILNKLVFAIC 174 >gi|297243500|ref|ZP_06927432.1| ribosomal protein S2 [Gardnerella vaginalis AMD] gi|296888545|gb|EFH27285.1| ribosomal protein S2 [Gardnerella vaginalis AMD] Length = 224 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 87/224 (38%), Positives = 131/224 (58%), Gaps = 2/224 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 M+ KA I TVA G +LFV TK QA + V A R V +WLGGM+TN++TVS Sbjct: 1 MIDKAYDFIKQTVAHNGTVLFVGTKKQAQEAVQNQATRVNMPYVCERWLGGMLTNFQTVS 60 Query: 111 QSIQKLRDLEELL--NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 +++L++LEE+ + G TKKE L +ER++DKL + L GIR+M P MFVVD N Sbjct: 61 TRVKRLKELEEMDFSDVRGSGLTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDIN 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +E LA++EA +L IP+VA+VDTN++P+ V+Y IP NDD+ R I L L+A A +G+ Sbjct: 121 KEALAVEEAHKLGIPVVAIVDTNTDPEAVEYPIPANDDAIRGIELLTSLMADAVAEGLLE 180 Query: 229 QHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 + + + ++ + +E ++ + + E Sbjct: 181 HAGKGAKSEGNDAQPMAAWEKELLTKEGEAEAKPAKEENTEANA 224 >gi|16603930|gb|AAL27211.1| ribosomal protein subunit 2 [Arctostaphylos manzanita] Length = 173 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADLVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + K RD E + K++ ++R+ L+ L GI+ M GLPD++ ++D ++ Sbjct: 61 KRLHKFRDLRMEQKMGRLERLPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 E A++E L IP + ++DTN +PDL+D IP NDD+ SI L + + A Sbjct: 121 EYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLILNKLVFAI 173 >gi|16603932|gb|AAL27212.1| ribosomal protein subunit 2 [Arctostaphylos uva-ursi] Length = 173 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADSVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + K RD E + K++ ++R+ L+ L GI+ M GLPD++ ++D ++ Sbjct: 61 KRLHKFRDLRMEQKMGRLERLPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 E A++E L IP + ++DTN +PDL+D IP NDD+ SI L + + A Sbjct: 121 EYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLILNKLVFAI 173 >gi|304373201|ref|YP_003856410.1| 30S ribosomal protein S2 [Mycoplasma hyorhinis HUB-1] gi|304309392|gb|ADM21872.1| 30S ribosomal protein S2 [Mycoplasma hyorhinis HUB-1] Length = 334 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 84/250 (33%), Positives = 147/250 (58%), Gaps = 4/250 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+G FGH+ W+PKM+ YI +N THI+D+ +T L+ A Q+I+ Sbjct: 39 PIVSKQKLLEAGTYFGHKASQWHPKMQPYILKRPKNGTHILDVVKTQKTLEIAYQLINKL 98 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +FV TK QA V A+R+ V+ +WLGG +TN KT+ ++++++LEE Sbjct: 99 ALKGASFIFVGTKKQARKVVEAQAERTNSIYVSERWLGGTLTNKKTILSRLKQMQELEEH 158 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD---LMFVVDTNREKLAIQEARR 179 +TKKE + + +K KL++ L+GIR + + + +M V D N++ +AI+EA++ Sbjct: 159 AENNFSNYTKKEGVLMSKKLAKLQKNLNGIRGLKFINNDKLIMLVADPNKDIIAIKEAKK 218 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 ++ ++ ++D+N++P L+D+ IP NDDS +SI L ++A A + + T++ Sbjct: 219 AKVKVIGIMDSNTDPSLLDFGIPANDDSVKSITLIFTVLADAIATAKGGKALFAYQPTEN 278 Query: 240 AGETVVHSKE 249 KE Sbjct: 279 IVLPEDPDKE 288 >gi|301633721|gb|ADK87275.1| ribosomal protein S2 [Mycoplasma pneumoniae FH] Length = 294 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 4/276 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTV 63 ++ +L E G WNPKM +I ER NN H + L LQ A + + Sbjct: 18 VSLAKLGEMRTHVGMVKRYWNPKMGFFIEPERKHNNDHFV-LELQRQSLQTAYNYVKEVA 76 Query: 64 ARGGRILFVATKS-QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK+ V AKR + +WLGG +TN+KT+S SI KL L E Sbjct: 77 QNNGQILFVGTKNDYVKKLVNNIAKRVHVAFITQRWLGGTLTNFKTLSISINKLNKLVEK 136 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + TKKE L + R+ ++L++ G++ + LP+L+ V D EK A+ EA LRI Sbjct: 137 QAENAADLTKKENLMLSREIERLEKFFGGVKSLKRLPNLLIVDDPVYEKNAVAEANSLRI 196 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA+ +TN+NP+LVD++IP N+ +S L +L+A A + A + + Sbjct: 197 PVVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAKAMPTMFAYKPDEEIQI 256 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + +E + + +S+ + PE+++ Sbjct: 257 EIPQKQEAPRQVVNRANSKQITSQRLNITRNPEVLT 292 >gi|13507947|ref|NP_109896.1| 30S ribosomal protein S2 [Mycoplasma pneumoniae M129] gi|2500389|sp|P75560|RS2_MYCPN RecName: Full=30S ribosomal protein S2 gi|1674326|gb|AAB96271.1| ribosomal protein S2 [Mycoplasma pneumoniae M129] Length = 294 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 4/276 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVISDTV 63 ++ +L E G WNPKM +I ER NN H + L LQ A + + Sbjct: 18 VSLAKLGEMRTHVGMVKRYWNPKMGFFIEPERKHNNDHFV-LELQRQSLQTAYNYVKEVA 76 Query: 64 ARGGRILFVATKS-QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G+ILFV TK+ V AKR + +WLGG +TN+KT+S SI KL L E Sbjct: 77 QNNGQILFVGTKNDYVKKLVNNIAKRVDVAFITQRWLGGTLTNFKTLSISINKLNKLVEK 136 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + TKKE L + R+ ++L++ G++ + LP+L+ V D EK A+ EA LRI Sbjct: 137 QAENAADLTKKENLMLSREIERLEKFFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRI 196 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 P+VA+ +TN+NP+LVD++IP N+ +S L +L+A A + A + + Sbjct: 197 PVVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAKAMPTMFAYKPDEEIQI 256 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + +E + + +S+ + PE+++ Sbjct: 257 EIPQKQEAPRQVVNRANSKQITSQRLNITRNPEVLT 292 >gi|195928793|gb|ACG56076.1| ribosomal protein subunit 2 [Agalinis setacea] Length = 169 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 2/171 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +A+ V AA ++ +CVN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASSGKQFLIVCTKKKAAHFVARAAIKARCHCVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 +QK RDL + ++ K++ ++R+ +L+R L GI+ M GLPD++ +VD + E Sbjct: 61 TRLQKFRDLR--MEQKTGRLPKRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIIVDQHEE 118 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 A++E L IP + ++DTN +PDL D IP NDDS SI L + + A Sbjct: 119 YTALRECITLGIPTICLIDTNCDPDLADLPIPANDDSISSIRLILNKLVFA 169 >gi|330723939|gb|AEC46309.1| 30S ribosomal protein S2 [Mycoplasma hyorhinis MCLD] Length = 334 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 84/250 (33%), Positives = 147/250 (58%), Gaps = 4/250 (1%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDT 62 P + ++LLE+G FGH+ W+PKM+ YI +N THI+D+ +T L+ A Q+I+ Sbjct: 39 PIVSKQKLLEAGTYFGHKASQWHPKMQPYILKRPKNGTHILDVVKTQKTLEIAYQLINKL 98 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +G +FV TK QA V A+R+ V+ +WLGG +TN KT+ ++++++LEE Sbjct: 99 ALKGASFIFVGTKKQARKVVEAQAERTNSIYVSERWLGGTLTNKKTILSRLKQMQELEEH 158 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD---LMFVVDTNREKLAIQEARR 179 +TKKE + + +K KL++ L+GIR + + + +M V D N++ +AI+EA++ Sbjct: 159 AENNFSNYTKKEGVLMSKKLAKLQKNLNGIRGLKFINNDKLIMLVADPNKDIIAIKEAKK 218 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 ++ ++ ++D+N++P L+D+ IP NDDS +SI L ++A A + + T++ Sbjct: 219 AKVKVIGIMDSNTDPALLDFGIPANDDSVKSITLIFTVLADAIATAKGGKALFAYQPTEN 278 Query: 240 AGETVVHSKE 249 KE Sbjct: 279 IVLPEDPDKE 288 >gi|31544727|ref|NP_853305.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. R(low)] gi|81707854|sp|Q7NAW2|RS2_MYCGA RecName: Full=30S ribosomal protein S2 gi|31541573|gb|AAP56873.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. R(low)] gi|284930794|gb|ADC30733.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. R(high)] Length = 323 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 8/276 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN------NTHIIDLSQTVPMLQKALQVI 59 T +LL+ G G WNPKM+ YI RN +I+ L +A + Sbjct: 42 VTHTKLLDVGAFNGVAKRKWNPKMKHYIIP-RNAAQFSAQFDLINSDLLNLKLHEAFNYL 100 Query: 60 SDTVARGGRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 ++ ILFV TKS+A + + A+R+ + +N +WLGG +TN+KT+S SI +L+ Sbjct: 101 TEAAKAKKNILFVGTKSKAVQELIQSIAERTNSFYINQRWLGGTLTNFKTISNSINQLKR 160 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L + + +TKKE++ I +K KL+R GI+DM GLP ++ + D +EK A+ EAR Sbjct: 161 LIHTRDNDLTKYTKKEQIMIMKKLAKLERFFGGIKDMQGLPHVLVIDDPIKEKNAVTEAR 220 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +LRIP++A+ +TNS+P+++ IP N+ + RS+ L +L+ A + + Sbjct: 221 KLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGDAVALAQGNPAKFAFKPDE 280 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 + KE + ++ + E A P Sbjct: 281 EIDIPQLVKKETRTVVNRDRAGFNKKQPKAEEAAKP 316 >gi|255713408|ref|XP_002552986.1| KLTH0D06094p [Lachancea thermotolerans] gi|238934366|emb|CAR22548.1| KLTH0D06094p [Lachancea thermotolerans] Length = 402 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 122/233 (52%), Gaps = 19/233 (8%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ + +I +LL +GV G LW P + YI+ E HIIDL++T+ L++A +V+ Sbjct: 188 AIEELSISKLLAAGVHLGQSTSLWRPSTQPYIYGEYKGIHIIDLNKTLSNLKRAAKVVQG 247 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 +GG ILF+ T+ + EAAKR+ + V+++W+ G +TN +S ++ +++ Sbjct: 248 VAEKGGTILFLGTRDGQKRALQEAAKRTNGFYVSTRWIPGTLTNPTEISSVWER-HEIDF 306 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N+ T E I + PDL+ V++ + A+ EA + R Sbjct: 307 ADTPTNRPLTSDEEAAIVK------------------PDLLVVLNPTENRNALNEAMQAR 348 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +P V ++DT+S P LV Y IPGNDDS RS+ + ++A A G+ + + Sbjct: 349 VPTVGIIDTDSEPSLVTYPIPGNDDSLRSVNIILSVLAKAGEVGLQSRLAKAA 401 >gi|89243578|gb|ABD64908.1| ribosomal protein subunit 2 [Orobanche nowackiana] Length = 187 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII+L++T L +A ++ + ++G + L V TK Sbjct: 1 FGHHSKKWNPKMSPYISAERRHRHIINLTKTARFLYEACYLVFNAASKGKQFLIVGTKEI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 +D V EAA + + VN KW GG++TNW ++K +D + E KK+ Sbjct: 61 TADLVEEAAITARCHFVNKKWTGGLLTNWPITEARLKKFKDLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + +++L GI+ M GLPD++ ++D N E A+QE L+IP ++++DTNS+P L Sbjct: 121 VVKRQLSRFQKSLGGIKSMNGLPDIVIILDQNEEYKALQECITLKIPTISLIDTNSDPYL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|83745379|gb|ABC42400.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FGH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 FGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW GG +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++ TNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKYMRGLPDIVIILHQNEEYKALQECINLGIPTISLIGTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|41058645|gb|AAR99309.1| ribosomal protein subunit B [Candidatus Blochmannia pennsylvanicus] Length = 172 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 81/172 (47%), Positives = 111/172 (64%), Gaps = 1/172 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF RN HIIDL T M ++AL ++ A G+ILFV TK AS Sbjct: 1 HQTRYWNPKMKPFIFGVRNKIHIIDLETTSVMFRQALIELNKIAALKGKILFVGTKRAAS 60 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNI 138 + V + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + Sbjct: 61 ESVKKTALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFKKLTKKEALIL 120 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 R+ L+ +L GI++MGGLPD +F V E +AI+EA L IP+ ++VDT Sbjct: 121 NRELINLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEANSLGIPVFSIVDT 172 >gi|284931302|gb|ADC31240.1| 30S ribosomal protein S2 [Mycoplasma gallisepticum str. F] Length = 323 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 83/251 (33%), Positives = 135/251 (53%), Gaps = 8/251 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN------NTHIIDLSQTVPMLQKALQVI 59 T +LL+ G G WNPKM+ YI RN +I+ L +A + Sbjct: 42 VTHTKLLDVGAFNGVAKRKWNPKMKHYIIP-RNAAQFSAQFDLINSDLLNLKLHEAFNYL 100 Query: 60 SDTVARGGRILFVATKSQA-SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 ++ ILFV TKS+A + + A+R+ + +N +WLGG +TN+KT+S SI +L+ Sbjct: 101 TEAAKAKKNILFVGTKSKAVQELIQSIAERTNSFYINQRWLGGTLTNFKTISNSINQLKR 160 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L + + +TKKE++ I +K KL+R GI+DM GLP ++ + D +EK A+ EAR Sbjct: 161 LIHTRDNDLTKYTKKEQIMIMKKLAKLERFFGGIKDMQGLPHVLVIDDPIKEKNAVTEAR 220 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +LRIP++A+ +TNS+P+++ IP N+ + RS+ L +L+ A + + Sbjct: 221 KLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGDAVALAQGNPAKFAFKPDE 280 Query: 239 SAGETVVHSKE 249 + KE Sbjct: 281 EIDIPQLVKKE 291 >gi|83745406|gb|ABC42412.1| ribosomal protein subunit 2 [Phelipanche tunetana] Length = 187 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HII+L++T L +A ++ ++G + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIINLTKTARFLYEACNLVFYAASKGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTN++PDL Sbjct: 121 VVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLIDTNADPDL 180 Query: 197 VDYVIPG 203 IP Sbjct: 181 AHISIPA 187 >gi|83745412|gb|ABC42415.1| ribosomal protein subunit 2 [Phelipanche cf. tunetana Schonswetter & Tribsch 10691] Length = 187 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + HIIDL++T L +A ++ ++G + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHIIDLTKTARFLYEACNLLFYAASKGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTN++PDL Sbjct: 121 VVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLIDTNADPDL 180 Query: 197 VDYVIPG 203 IP Sbjct: 181 AHISIPA 187 >gi|156848993|ref|XP_001647377.1| hypothetical protein Kpol_1018p50 [Vanderwaltozyma polyspora DSM 70294] gi|156118063|gb|EDO19519.1| hypothetical protein Kpol_1018p50 [Vanderwaltozyma polyspora DSM 70294] Length = 375 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 19/248 (7%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I +L+ +GV G LW + YI+ E HIIDL++T+ L++A +V+ Sbjct: 147 ELSIAKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNKTLSHLKRAAKVVEGIAE 206 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILF+ T+ + EAAKR+ Y V+S+W+ G +TN +S ++ +++ Sbjct: 207 RGGIILFLGTRQGQKRGLEEAAKRTHGYYVSSRWIPGTLTNPTEISNVWER-HEVDFFDT 265 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + T+ E+++I + PDL+ V++ + A+ EA + R+P Sbjct: 266 PTGRELTQNEQISIVK------------------PDLLVVLNPTENRNALNEAMQARVPT 307 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + ++DT+S P V Y IPGNDDS RS+ L ++A A G+ + A + V Sbjct: 308 IGIIDTDSEPSFVTYPIPGNDDSLRSVNLILGVLAKAGERGLENRLLKAKAAENAVESDV 367 Query: 245 VHSKEGMQ 252 E + Sbjct: 368 TIETEAIA 375 >gi|304322965|ref|YP_003795483.1| ribosomal protein S2 [Floydiella terrestris] gi|270048164|gb|ACZ58459.1| ribosomal protein S2 [Floydiella terrestris] Length = 315 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 69/220 (31%), Positives = 119/220 (54%), Gaps = 1/220 (0%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T +++L+ V +G + NP+M+++ + I L QT L +AL +++ + Sbjct: 64 TYKEMLKRNVHYGDKTVTCNPEMKKFTRGKDRGNSFISLFQTRRYLIRALWLLTKYAYQK 123 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +LFV T +S V AA + + VN +WLGGM+TNWKT+ + I+KL+ +L K+ Sbjct: 124 RPMLFVGTSRPSSRPVATAALNTKSFFVNVRWLGGMLTNWKTMRKLIKKLKKFTKLRQKK 183 Query: 127 -NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 KKE +++ +L++ L G++ + P ++ + +EK A E +++ I + Sbjct: 184 AFLNSPKKEIAARKKEIQRLEKYLKGLKMLRTFPQVVIMASQKKEKSAALECQKMGIFNM 243 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 + DT+ NP L D++IP NDDSS SI A A + G Sbjct: 244 TIADTDCNPKLADFIIPANDDSSTSIKFLLFYFAKAILIG 283 >gi|83745373|gb|ABC42397.1| ribosomal protein subunit 2 [Phelipanche coelestis] Length = 187 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM YI ER + HII++++T L +A ++ +RG + L V T Sbjct: 1 LGHHSKKWNPKMTPYISAERKHRHIINITKTARFLYEACNLVFYAASRGKQFLIVGTNKI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTSGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++ N E A+QE L IP ++++DTNS+PDL Sbjct: 121 VVKRQLSRFQKNLGGIKSMRGLPDIVIILHQNEEYKALQECINLGIPTISLIDTNSDPDL 180 Query: 197 VDYVIPG 203 D IP Sbjct: 181 ADISIPA 187 >gi|254578042|ref|XP_002495007.1| ZYRO0B01254p [Zygosaccharomyces rouxii] gi|238937897|emb|CAR26074.1| ZYRO0B01254p [Zygosaccharomyces rouxii] Length = 399 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 19/234 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + ++ +LLE+GV G +W P + +I+ E H+IDL++T+ L++A +V+ Sbjct: 185 KVSVNKLLEAGVHLGQSTSIWRPSTQPFIYGEYKGIHLIDLNKTLSSLKRAAKVVEGISE 244 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG IL+V T+ + EAAKR+ Y ++++W+ G +TN +S ++ +++ Sbjct: 245 RGGVILYVGTREGQKRALEEAAKRTNGYYISTRWIPGTLTNSTEISGVWER-HEVDFADK 303 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 N+ T E I + PDL+ V++ + A++E+ + R+P Sbjct: 304 PTNRELTPAETSGICK------------------PDLIVVLNPTENRNALRESMQARVPT 345 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 + ++DT+S P +V Y IPGNDDS RS+ L +++ A G + + D + Sbjct: 346 IGIIDTDSEPSMVTYPIPGNDDSLRSVNLILGVLSRAGQRGRQNRLAKFSTDLE 399 >gi|67968290|dbj|BAE00190.1| ribosomal protein S2 [Selaginella uncinata] Length = 228 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 1/214 (0%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFV 72 E G GH+ WNPKM + ER H +D +QT + +A ++ +G + Sbjct: 15 EVGAHSGHQARRWNPKMAPHTSTEREGIHTLDPTQTARLSPEARDPVASAAGKGKQFPIA 74 Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTK 132 TK QA+D V AA R+ + N K LGG TN T Q+L D E + + Sbjct: 75 GTKYQAADVVQSAATRAQCHYANEKRLGGTPTNRSTTETRPQRLEDSEGKAERLHNSSEG 134 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 + + R+ +L+R G R LPD+ +D +E +A +E P +VDT+ Sbjct: 135 R-AATLGRQSAQLRRDPGGTRYTKSLPDIATTIDQRKEPIATRECTAPGTPTTCLVDTDC 193 Query: 193 NPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +PDL D IP NDD I + +A +G Sbjct: 194 DPDLTDIPIPANDDPRAPIRRIPNKPTTAIREGR 227 >gi|16603928|gb|AAL27210.1| ribosomal protein subunit 2 [Arbutus menziesii] Length = 168 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKRVADLVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + K RD E + K++ ++R+ L+ L GI+ M GLPD++ ++D ++ Sbjct: 61 KRLHKFRDLRMEQKMGRLERLPKRDAARLKRQLSHLQAYLGGIKYMTGLPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 E A++E L IP + ++DTN +PDL+D IP NDD+ SI L + Sbjct: 121 EYTALRECITLGIPTICLIDTNCDPDLIDLPIPANDDNRSSIRLILNK 168 >gi|83745402|gb|ABC42411.1| ribosomal protein subunit 2 [Phelipanche tunetana] Length = 187 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 1/187 (0%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 GH + WNPKM+ YI ER + H IDL++T L +A ++ ++G + L V T Sbjct: 1 LGHHSRKWNPKMKPYISAERKHRHTIDLTKTARFLYEACNLLFYAASKGKQFLIVGTNKM 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERL 136 D V +AA ++ + VN KW G +TNW +QK R+ + E KK+ Sbjct: 61 RDDLVEQAAIKAQCHFVNKKWTCGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++R+ + ++ L GI+ M GLPD++ ++D + + A+ E L IP + ++DTN++PDL Sbjct: 121 VVKRQLSRFEKNLGGIKYMRGLPDIVIILDQDEDFTALAECLSLEIPTICLIDTNADPDL 180 Query: 197 VDYVIPG 203 IP Sbjct: 181 AHISIPA 187 >gi|145255595|ref|XP_001399013.1| 40S ribosomal protein S2 [Aspergillus niger CBS 513.88] gi|134084605|emb|CAK97481.1| unnamed protein product [Aspergillus niger] Length = 370 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 30/285 (10%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL + GH WNP+ RYIF R THII L T L++A +V+ + Sbjct: 104 DVTLEMLLANQTHLGHSTSRWNPQNSRYIFGIREGTHIISLDVTAAYLRRAAKVVEEVAY 163 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILF T+ V+ AA+ + Y + +W+ G +TN + + +K +++N Sbjct: 164 RGGLILFAGTRKGQKRAVVRAAELAQGYHIFERWIPGSLTNGQQILGHCEK-----KIVN 218 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ D K L+ R + PDL+ ++ + + E +P Sbjct: 219 GLDETL-----------DDLWKEELESYRALK--PDLVVCLNPVENVVLLHECGLNNVPT 265 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD-------- 236 + ++DT+++P V Y IP NDDS RS+ L ++ A G R+ + Sbjct: 266 IGIIDTDADPTRVTYPIPANDDSLRSVTLIAGVLGRAGEVGQRRRLARARKGHLTYEHME 325 Query: 237 --TKSAGETVVHSKEGMQLEEDSQS--SESSVLDGQEVAVVPELM 277 E + + EG + E SQ SE S L+ + + Sbjct: 326 PLRVQVEEQTLETAEGQKSEASSQEVVSEGSPLEKPKEEASKDDE 370 >gi|41058635|gb|AAR99304.1| ribosomal protein subunit B [Candidatus Blochmannia festinatus] Length = 172 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 1/172 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF +N HIIDL +T+ M KAL + G+ILFV TK A Sbjct: 1 HQTRYWNPKMKPFIFGVQNKIHIIDLDKTILMFNKALVELKKITTLKGKILFVGTKRAAR 60 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNI 138 + + A Q+ VN +WLGGM+TNWKTV QSI++L++LE + Q TKKE L + Sbjct: 61 ESIKSTALICGQFFVNHRWLGGMLTNWKTVRQSIKRLKELENQSQDGTFQKLTKKEVLIL 120 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 + + L+ +L GI++MGGLPD +F V E +AI+EA L IP+ ++VDT Sbjct: 121 KHELRGLENSLGGIKNMGGLPDAIFTVGAIHEHIAIKEANSLGIPVFSIVDT 172 >gi|165910491|gb|ABY74000.1| ribosomal protein S2 [Humbertia madagascariensis] Length = 173 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 63/173 (36%), Positives = 100/173 (57%), Gaps = 1/173 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI +R HI +L++T L + ++ D +RG + L V TK++A+D V A+ R Sbjct: 1 MAPYISAKRKGIHITNLTRTARFLSETCDLVFDAASRGKQFLIVGTKNKAADSVAWASIR 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKR 147 + + VN KWLGGM+TNW T +QK RD E K++ ++R+ +L+ Sbjct: 61 ARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRMEQKMGGLNRLPKRDATMLKRQLARLQT 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 L GI+ M GLPD++ +VD ++E A++E L IP + ++DTN +P+L D Sbjct: 121 YLGGIKYMTGLPDIVIIVDQHKEYTALRECITLGIPTICLIDTNCDPNLSDIS 173 >gi|224501401|ref|ZP_03669708.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL R2-561] Length = 184 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 73/158 (46%), Positives = 111/158 (70%), Gaps = 1/158 (0%) Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKE 126 ILFV TK QA + V + A RS QY VN +WLGG +TN++T+ + IQ L+ +E + + Sbjct: 1 TILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGT 60 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ Sbjct: 61 FEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIG 120 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 121 IVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 158 >gi|165910473|gb|ABY73991.1| ribosomal protein S2 [Cuscuta nitida] Length = 177 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 1/176 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M YI +R HI +L++T L +A ++ +RG + L V T ++A+D V A+ Sbjct: 1 MVPYISAKRKGIHITNLTRTARFLSQACDLVFHAASRGKKFLIVGTNNKAADSVARASIG 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKR 147 + + VN KWL GM+TNW T +QK RDL E TK+E ++R+ +L+ Sbjct: 61 ARCHYVNKKWLAGMLTNWSTTETRLQKFRDLRIEQKRGGLDRLTKREATRLKRQLARLQT 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 L GI+ M GLPD++ ++D +++ A++E R L IP + ++DTN +P+L D IP Sbjct: 121 YLGGIQYMTGLPDIVIIIDQHKDYTALRECRILGIPTICLIDTNCDPNLSDISIPA 176 >gi|115350015|ref|YP_764388.1| ribosomal protein S2 [Stigeoclonium helveticum] gi|122165159|sp|Q06SH8|RR2_STIHE RecName: Full=30S ribosomal protein S2, chloroplastic gi|98990229|gb|ABF60196.1| ribosomal protein S2 [Stigeoclonium helveticum] Length = 314 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 69/225 (30%), Positives = 124/225 (55%), Gaps = 1/225 (0%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 P T + +L + FGH + M++YI + N H I+L +T ++KAL ++ Sbjct: 59 PIETYKIMLRKSLHFGHPVIQCDSGMKKYIRGQSNGKHFINLFRTKRYIRKALWYLTKYA 118 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEEL 122 + ILFV T ++ V A ++ + VN +WLGGM+ NWKT+ + +QKL+ +E Sbjct: 119 YKRKNILFVGTAIPSARYVATTALKTKSFFVNFRWLGGMLNNWKTLRKLLQKLKTLQKEQ 178 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 NK + KKE + +++ +L++ L GI+ + G P+++ + ++ A +E +++ I Sbjct: 179 KNKIWKNLPKKEGIARLKEKQRLEKYLKGIQMIKGFPEVVIMTSQTKDLSAARECKKMGI 238 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 ++++DTN +P L D ++P NDDS+ S+ A A G A Sbjct: 239 WNLSILDTNCDPRLADLMVPANDDSASSVKFLLFNFAKAIQAGRA 283 >gi|195928695|gb|ACG56027.1| ribosomal protein subunit 2 [Agalinis calycina] Length = 168 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +A ++ D + G + L V TK++A+D V AA ++ +CVN KWLGGM+TNW T + Sbjct: 1 EACDLVFDAASSGKQFLIVGTKNKAADLVAWAAIKARCHCVNKKWLGGMLTNWSTTETRL 60 Query: 114 QKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 QK RD E K++ ++R+ +L+ L GI+ M GLPD++ +VD + E Sbjct: 61 QKFRDLRMEQKTGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHEEYT 120 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A++E L IP + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 121 ALRECITLGIPTICLIDTNCDPDLADISIPANDDAISSIRLILNKLV 167 >gi|212528244|ref|XP_002144279.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] gi|210073677|gb|EEA27764.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] Length = 270 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 14/255 (5%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 30 SEVTLELLLASQTHLGHTTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVA 89 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG ILFV T+ +CV+ AA+ + Y V +W+ G +TN + + + +++ + Sbjct: 90 RRGGLILFVGTRPGQKECVVRAAEMTKGYHVFERWIPGSLTNGQQILGNC----EIKVVN 145 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + K+ ++ D + L PDL+ ++ ++ + E IP Sbjct: 146 ALDQELTDYKQYISTTTNADAARPVLK--------PDLVICLNPVENEVLLHECGIHNIP 197 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + V+DT+++P V Y IP NDDS RS+ L + A +G ++ M A T Sbjct: 198 TIGVIDTDADPTRVTYPIPANDDSLRSVQLIAGALGRAGEEG--QRLRLMEAAKGKFTYT 255 Query: 244 VVHSKEGMQLEEDSQ 258 V K+ E Q Sbjct: 256 PVKEKDIKPSTEGEQ 270 >gi|212528242|ref|XP_002144278.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] gi|210073676|gb|EEA27763.1| 40S ribosomal protein S2, putative [Penicillium marneffei ATCC 18224] Length = 358 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 14/255 (5%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 118 SEVTLELLLASQTHLGHTTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVA 177 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG ILFV T+ +CV+ AA+ + Y V +W+ G +TN + + + +++ + Sbjct: 178 RRGGLILFVGTRPGQKECVVRAAEMTKGYHVFERWIPGSLTNGQQILGNC----EIKVVN 233 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + K+ ++ D + L PDL+ ++ ++ + E IP Sbjct: 234 ALDQELTDYKQYISTTTNADAARPVLK--------PDLVICLNPVENEVLLHECGIHNIP 285 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + V+DT+++P V Y IP NDDS RS+ L + A +G ++ M A T Sbjct: 286 TIGVIDTDADPTRVTYPIPANDDSLRSVQLIAGALGRAGEEG--QRLRLMEAAKGKFTYT 343 Query: 244 VVHSKEGMQLEEDSQ 258 V K+ E Q Sbjct: 344 PVKEKDIKPSTEGEQ 358 >gi|195928689|gb|ACG56024.1| ribosomal protein subunit 2 [Agalinis aphylla] Length = 172 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 1/172 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ G + L V TK +A+D V AA ++ +CV KWLGGM+TNW T Sbjct: 1 FLSEACGLVFHAARSGKQFLIVGTKKKAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 +QK RD E K++ ++R+ +L+ L GI+ M GLPD++ +VD + Sbjct: 61 TRLQKFRDLRMEQKMGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIIVDQHE 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 E A++E L IP + ++DTN +PDL D IP NDD+ SI L + + A Sbjct: 121 EYTALRECITLGIPTICLIDTNCDPDLADLSIPANDDARSSIRLILNKLVFA 172 >gi|50304367|ref|XP_452133.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641265|emb|CAH02526.1| KLLA0B13519p [Kluyveromyces lactis] Length = 406 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 19/234 (8%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 +L Q +I +L+ +GV G LW + YI+ E HIIDL+QT+ L++A QV+ Sbjct: 192 SLQQVSIEKLMAAGVHLGQSTALWRASTQPYIYGEYKGIHIIDLNQTLSHLKRAAQVVEG 251 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ +++AA+R Y V SKW+ G +TN +S S ++ +++ Sbjct: 252 VAENGGLILFLGTREGQKRTLIKAAERVNGYYVASKWVPGTLTNPTEISSSWER-HEVDY 310 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + T E ++I + PDL+ V++ + A++EA + R Sbjct: 311 FGNPTGRELTLNESMSIIK------------------PDLLVVLNPTENRNALKEAMKAR 352 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 +P + ++DT+S P LV Y IP NDDS RS++L ++A A G+ + + Sbjct: 353 VPTIGIIDTDSEPSLVTYPIPANDDSLRSVSLLTSILAKAGERGVQTRLNRASV 406 >gi|41058637|gb|AAR99305.1| ribosomal protein subunit B [Candidatus Blochmannia ocreatus] Length = 177 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 76/174 (43%), Positives = 113/174 (64%), Gaps = 1/174 (0%) Query: 20 HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQAS 79 H+ WNPKM+ +IF RN HII+L T+ M ++AL + + + G+ILFV TK A Sbjct: 4 HQTRYWNPKMKPFIFGIRNKIHIINLEITMLMFKQALFELKNITSLKGKILFVGTKRAAR 63 Query: 80 DCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNI 138 + + + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + Sbjct: 64 ETIKKTALSCNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLENQSKDGTFKKVTKKEALIL 123 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 R+ L+ +L GI++MGGLP+ +F + E++AI+EA L IP+ ++VDT S Sbjct: 124 NRELISLENSLGGIKNMGGLPEAIFAIGATHEQIAIKEAHSLGIPVFSIVDTCS 177 >gi|163791109|ref|ZP_02185529.1| 30S ribosomal protein S2 [Carnobacterium sp. AT7] gi|159873665|gb|EDP67749.1| 30S ribosomal protein S2 [Carnobacterium sp. AT7] Length = 150 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 61/150 (40%), Positives = 94/150 (62%), Gaps = 1/150 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+RYIF ERN +IIDL +TV + A + + Sbjct: 1 MAVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLADTAYNYMKEV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG LFV TK QA + + + A R+ QY VN +WLGG +TNW T+ + I++L+ + ++ Sbjct: 61 SENGGIALFVGTKKQAQEAIKDEATRAGQYFVNHRWLGGTLTNWDTIQKRIKRLKAINKM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRALDG 151 + KKE + ++RD+L++ L G Sbjct: 121 EEDGTFDVLPKKEVGILIKQRDRLEKFLGG 150 >gi|195928799|gb|ACG56079.1| ribosomal protein subunit 2 [Agalinis skinneriana] Length = 171 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 1/171 (0%) Query: 52 LQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQ 111 L +A ++ +RG + L V TK +A+D V AA ++ +CV KWLGGM+TNW T Sbjct: 1 LSEACDLVCYAASRGKQFLIVGTKREAADLVAWAAIKARCHCVTKKWLGGMLTNWSTTET 60 Query: 112 SIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 +QK RD E K++ ++R+ +L+ L GI+ M GLPD++ ++D + E Sbjct: 61 RLQKFRDLRMEQKTGRLNRLPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHEE 120 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 A++E L IP + ++DTN +PDL D IP NDD SI + + A Sbjct: 121 YTALRECITLGIPTICLIDTNCDPDLADISIPANDDGRSSIRFILNKLVFA 171 >gi|115389276|ref|XP_001212143.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194539|gb|EAU36239.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 341 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 21/257 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 ++ LL + GH WNP+ RYIF R+ HII L T L++A +V+ + Sbjct: 103 ADISLELLLANQTHLGHSTSRWNPQNSRYIFGIRDGVHIISLDVTAAYLRRAAKVVEEVA 162 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++ Sbjct: 163 ARGGLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCE-----TKVV 217 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ K + L +R K PDL+ ++ + + E +P Sbjct: 218 NGLDEELPKYKELLADRPVLK--------------PDLVVCLNPLENVVLLHECGLNNVP 263 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + ++DT+++ V Y IP NDDS R++ L ++ A G R+ A+ Sbjct: 264 TIGIIDTDADATRVTYPIPSNDDSLRAVGLIAGILGRAGEAGQLRRLEQ--AEKGVYTYP 321 Query: 244 VVHSKEGMQLEEDSQSS 260 V+S+E E S+ Sbjct: 322 PVNSQELKAESEQSEKP 338 >gi|16603952|gb|AAL27222.1| ribosomal protein subunit 2 [Rhododendron groenlandicum] Length = 172 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 98/172 (56%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D R RIL V TK + +D V +AA ++ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLVFDAARRRKRILIVGTKKRVADLVAQAAIKARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 + + K + L L + K++ ++RK L+ L GI+ M +PD++ ++D ++E Sbjct: 61 RRLCKFKKLRLELKMVRRNLLKRDAARLKRKLSHLQTYLGGIKYMTAIPDIVIIIDQHKE 120 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 A++E L IP + ++DTN +PDLVD+ IP NDD+ SI + A Sbjct: 121 YTALRECIILGIPTICLIDTNCDPDLVDFPIPANDDTRASIRFILTKLVFAI 172 >gi|259481136|tpe|CBF74389.1| TPA: 40S ribosomal protein S2, putative (AFU_orthologue; AFUA_1G06570) [Aspergillus nidulans FGSC A4] Length = 332 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 19/238 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL + GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 101 SDITLELLLANQTHLGHSTSRWNPQNSRYIFGIREGIHIISLDITAAYLRRAAKVVEEVA 160 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILF T+ V+ AA+ S Y + +W+ G +TN + + + Sbjct: 161 ARGGLILFAGTRPGQKRIVVRAAELSKGYHIFERWIPGSLTNGEQILGHCE--------- 211 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KK ++ + LK +L + PDL+ ++ + + E +P Sbjct: 212 --------KKVVNVLDEELPDLKESLADHAILK--PDLVICLNPLENEPLLHECGLNNVP 261 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 + ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ D + Sbjct: 262 TIGIIDTDADPTRVTYPIPANDDSLRSVAVIAGVLGRAGQAGQKRRLEQAKKDLERKA 319 >gi|225679004|gb|EEH17288.1| 37S ribosomal protein MRP4 [Paracoccidioides brasiliensis Pb03] Length = 600 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 21/260 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R+ HII L T L++A +V+ + Sbjct: 359 DITLELLLASQTHLGHATSLWNPANSEYIFGSRHGIHIISLDVTAAYLRRAAKVVHEVAK 418 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV T+ V+ AA R+ V +W+ G +TN + + +K + + Sbjct: 419 RGGLILFVGTRKGQRRIVVGAASRAKGCHVFQRWIPGSLTNSEQILGHCEK-KVVNAFDE 477 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K E+L + PDL+ ++ + + E IP Sbjct: 478 PLGGYEDKLEKLPALK------------------PDLVVCLNPLENRPLLHECGLHMIPT 519 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ--HSYMGADTKSAGE 242 + ++DT++NP V Y IP NDDS RS+A+ ++ AA +G A + + G T + Sbjct: 520 IGIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAAEEGQAVRLQEAREGNVTYPVND 579 Query: 243 TVVHSKEGMQLEEDSQSSES 262 + + K ++ E+ Sbjct: 580 MLANWKLVASEHVEASRDEN 599 >gi|67528027|ref|XP_661855.1| hypothetical protein AN4251.2 [Aspergillus nidulans FGSC A4] gi|40739729|gb|EAA58919.1| hypothetical protein AN4251.2 [Aspergillus nidulans FGSC A4] Length = 331 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 19/238 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL + GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 101 SDITLELLLANQTHLGHSTSRWNPQNSRYIFGIREGIHIISLDITAAYLRRAAKVVEEVA 160 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILF T+ V+ AA+ S Y + +W+ G +TN + + + Sbjct: 161 ARGGLILFAGTRPGQKRIVVRAAELSKGYHIFERWIPGSLTNGEQILGHCE--------- 211 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KK ++ + LK +L + PDL+ ++ + + E +P Sbjct: 212 --------KKVVNVLDEELPDLKESLADHAILK--PDLVICLNPLENEPLLHECGLNNVP 261 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 + ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ D + Sbjct: 262 TIGIIDTDADPTRVTYPIPANDDSLRSVAVIAGVLGRAGQAGQKRRLEQAKKDLERKA 319 >gi|16603936|gb|AAL27214.1| ribosomal protein subunit 2 [Gaultheria shallon] Length = 174 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 64/174 (36%), Positives = 99/174 (56%), Gaps = 2/174 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R+L + K + K+ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRNLRRMEQKMGRRNRLLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 +E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI + A Sbjct: 121 KEYTALRECIILGIPTVGLIDTNCDPDLVDFPIPANDDTRASIQFILSKLVFAI 174 >gi|260828589|ref|XP_002609245.1| hypothetical protein BRAFLDRAFT_86845 [Branchiostoma floridae] gi|229294601|gb|EEN65255.1| hypothetical protein BRAFLDRAFT_86845 [Branchiostoma floridae] Length = 283 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 103/246 (41%), Gaps = 40/246 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT R L + V GH+ W+ M YIF R HIIDL QTV +L +AL + R Sbjct: 78 FTQRDLFRANVHVGHKEGAWDRNMYPYIFGTRLGVHIIDLDQTVELLTRALNFTAHMAYR 137 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +LF++ Q + + AK +Y W GGM TN +L +L L+ Sbjct: 138 KAIVLFISRHRQFTHLIENTAKDCGEYAHTRYWQGGMFTNATLQYGEGVRLPELVIFLHT 197 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +AI++A +L IP V Sbjct: 198 LN--------------------------------------NVFESHVAIRDAAKLNIPTV 219 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +VDTN NP+L+ Y +PGNDDS ++ L+C L A + G A++ K E Sbjct: 220 GIVDTNCNPNLITYPVPGNDDSPEAVELYCRLFKEAILKGKAKREEIEKQIAKEREEKT- 278 Query: 246 HSKEGM 251 KEG Sbjct: 279 -RKEGA 283 >gi|226288080|gb|EEH43593.1| 40S ribosomal protein mrp4 [Paracoccidioides brasiliensis Pb18] Length = 390 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 21/260 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R+ HII L T L++A +V+ + Sbjct: 149 DITLELLLASQTHLGHATSLWNPANSEYIFGSRHGIHIISLDVTAAYLRRAAKVVHEVAK 208 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV T+ V+ AA R+ V +W+ G +TN + + +K + + Sbjct: 209 RGGLILFVGTRKGQRRIVVGAASRAKGCHVFQRWIPGSLTNSEQILGHCEK-KVVNAFDE 267 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K E+L + PDL+ ++ + + E IP Sbjct: 268 PLGGYEDKLEKLPALK------------------PDLVVCLNPLENRPLLHECGLHMIPT 309 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ--HSYMGADTKSAGE 242 + ++DT++NP V Y IP NDDS RS+A+ ++ AA +G A + + G T + Sbjct: 310 IGIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAAEEGQAVRLQEAREGNVTYPVND 369 Query: 243 TVVHSKEGMQLEEDSQSSES 262 + + K ++ E+ Sbjct: 370 MLANWKLVASEHVEASRDEN 389 >gi|327357616|gb|EGE86473.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis ATCC 18188] Length = 393 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 21/259 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 154 DITLELLLASQTHLGHATSLWNPANAEYIFGIRQGVHIISLDVTAAYLRRAAKVVREVAR 213 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILFV T+ V+ AA+R+ V +W+ G +TN + + +K +++N Sbjct: 214 HGGLILFVGTRKGQRRIVVSAAERAKGCHVFQRWIPGSLTNSEQILGHCEK-----QVVN 268 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ E + LK PDL+ ++ + + E IP Sbjct: 269 AFDEPLPGYEAQL--EQLPALK------------PDLVVCLNPLENRPLLHECGLHTIPT 314 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ--HSYMGADTKSAGE 242 + ++DT++NP V Y IP NDDS RS+A+ ++ A DG + + G + E Sbjct: 315 IGIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDGQRVRLQQAAEGKVMYAVNE 374 Query: 243 TVVHSKEGMQLEEDSQSSE 261 + K ++ + + Sbjct: 375 ILEDWKPKSAEVAEAGADQ 393 >gi|239994628|ref|ZP_04715152.1| ribosomal protein S2 [Alteromonas macleodii ATCC 27126] Length = 145 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 68/145 (46%), Positives = 99/145 (68%), Gaps = 1/145 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVP+ AL +S Sbjct: 1 MANVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYLSGV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 ++ G+ILFV TK A + V +AA + QY VN +WLGGM+TNWKTV QSI++L+DLE+ Sbjct: 61 ASKKGKILFVGTKRAAGEAVKDAALKCDQYYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQ 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLK 146 + + TKKE L ++R+ DKL+ Sbjct: 121 SQDGTFEKLTKKEALMLQREMDKLE 145 >gi|50291821|ref|XP_448343.1| hypothetical protein [Candida glabrata CBS 138] gi|49527655|emb|CAG61304.1| unnamed protein product [Candida glabrata] Length = 397 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 19/225 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +I +L+ +GV G LW + +I+ E N HIIDL+QT+ L++A QV+ Sbjct: 183 KMSIEKLMAAGVHLGQSTSLWRSSTQPFIYGEYNGIHIIDLNQTLAYLKRAAQVVEGVAE 242 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILF+ T+ + EAAKR+ Y V+++W+ G +TN +S +K E L Sbjct: 243 RGGVILFLGTRKGQKVALEEAAKRTHGYFVSTRWIPGTLTNSTEISGGWEKH---EVDLQ 299 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G ++ ++ + PDL+ V++ + A+ EA + R+P Sbjct: 300 DKPTGRP-----LQTDEKSRIVK-----------PDLLVVLNPTENRNALNEAMKSRVPT 343 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + +VDT+S P + Y IPGNDDS RS+ L ++A A G+ + Sbjct: 344 IGIVDTDSEPSFLTYPIPGNDDSLRSVNLLLGVLAKAGERGVKNR 388 >gi|195928791|gb|ACG56075.1| ribosomal protein subunit 2 [Agalinis setacea] Length = 162 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 2/164 (1%) Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 ++ D + G + L V TK +A+ V AA ++ +CVN KWLGGM+TNW T +QK R Sbjct: 1 LVFDAASSGKQFLIVCTKKKAAHFVARAAIKARCHCVNKKWLGGMLTNWSTTETRLQKFR 60 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 DL + ++ K++ ++R+ +L+R L GI+ M GLPD++ +VD + E A++E Sbjct: 61 DLR--MEQKTGRLPKRDAAVVKRQLSRLQRYLGGIKYMTGLPDIVIIVDQHEEYTALREC 118 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 L IP + ++DTN +PDL D IP NDDS SI L + + A Sbjct: 119 ITLGIPTICLIDTNCDPDLADLPIPANDDSISSIRLILNKLVFA 162 >gi|121702475|ref|XP_001269502.1| 40S ribosomal protein S2, putative [Aspergillus clavatus NRRL 1] gi|119397645|gb|EAW08076.1| 40S ribosomal protein S2, putative [Aspergillus clavatus NRRL 1] Length = 342 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 22/260 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 101 SDITLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAHLRRAAKVVEEVA 160 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + +++ Sbjct: 161 ARGGLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTNGQQILGHCD-----IKVV 215 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ + E+ K PDL+ ++ + + E +P Sbjct: 216 NVLDEELPQFNEALPEQPAIK--------------PDLVVCLNPIENAVLLHECGLNNVP 261 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + ++DT+++P V Y IP NDDS R++++ ++ A G R+ A Sbjct: 262 TIGIIDTDADPTRVTYPIPANDDSLRAVSIIAGVLGRAGEAGQKRRLEE--AKQGRVSYR 319 Query: 244 VVHSKE-GMQLEEDSQSSES 262 + KE G+++ ED + Sbjct: 320 LTPLKEMGIKVPEDQAEAAE 339 >gi|261206232|ref|XP_002627853.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis SLH14081] gi|239592912|gb|EEQ75493.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis SLH14081] Length = 371 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 21/259 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 132 DITLELLLASQTHLGHATSLWNPANAEYIFGIRQGVHIISLDVTAAYLRRAAKVVREVAR 191 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILFV T+ V+ AA+R+ V +W+ G +TN + + +K +++N Sbjct: 192 HGGLILFVGTRKGQRRIVVSAAERAKGCHVFQRWIPGSLTNSEQILGHCEK-----QVVN 246 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ E + LK PDL+ ++ + + E IP Sbjct: 247 AFDEPLPGYEAQL--EQLPALK------------PDLVVCLNPLENRPLLHECGLHTIPT 292 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ--HSYMGADTKSAGE 242 + ++DT++NP V Y IP NDDS RS+A+ ++ A DG + + G + E Sbjct: 293 IGIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDGQRVRLQEAAEGKVMYAVNE 352 Query: 243 TVVHSKEGMQLEEDSQSSE 261 + K ++ + + Sbjct: 353 ILEDWKPKSAEVAEAGADQ 371 >gi|83766833|dbj|BAE56973.1| unnamed protein product [Aspergillus oryzae] Length = 424 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH WNP+ RYIF R+ H+I L T L++A +V+ + Sbjct: 109 SDVTLELLLASQTHLGHSTSRWNPQNSRYIFGIRDGIHVISLDVTAAYLRRAAKVVEEVA 168 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++ Sbjct: 169 ARGGLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCE-----TKVV 223 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ K +R K PDL+ ++ + + E +P Sbjct: 224 NAMDEEIPKYREALADRSVLK--------------PDLVVCLNPLENVVLLHECGLNNVP 269 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + V+DT+++P V Y IP NDDS R+I + ++ A G R+ Sbjct: 270 TIGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGVLGRAGEAGQQRRLENA 319 >gi|225560622|gb|EEH08903.1| mitochondrial ribosomal protein subunit S2 [Ajellomyces capsulatus G186AR] Length = 393 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 24/257 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 152 DITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVAR 211 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILFV T+ ++ AA+R+ V +W+ G +TN + + K +++N Sbjct: 212 NGGLILFVGTRKGQRRIIVNAAERAKGCHVFQRWIPGSLTNSEQILGHCGK-----QVVN 266 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ E +L ++ PDL+ ++ + + E IP Sbjct: 267 AFDEPLPGYEAQL---------DSLPALK-----PDLVVCLNPLENRPLLHECGLHVIPT 312 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGADTKSAGE 242 + V+DT++NP V Y IP NDDS RS+A+ ++ A DG I + + G E Sbjct: 313 IGVIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDGQRIRLREAEEGKVMYPVNE 372 Query: 243 TVVHSK---EGMQLEED 256 + K EGM+ +E Sbjct: 373 ILEDWKPKSEGMREQEG 389 >gi|323354762|gb|EGA86596.1| Mrp4p [Saccharomyces cerevisiae VL3] Length = 240 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 19/228 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 28 NITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSE 87 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S +K Sbjct: 88 SGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEISGIWEK--------Q 139 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + ER + K + PDL+ V++ + A+ EA + R+P Sbjct: 140 EIDSNDNPTERALSPNETSKQVK-----------PDLLVVLNPTENRNALLEAIKSRVPT 188 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ + + Sbjct: 189 IAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLAR 236 >gi|323348399|gb|EGA82646.1| Mrp4p [Saccharomyces cerevisiae Lalvin QA23] Length = 394 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 19/228 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 182 NITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSE 241 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S +K Sbjct: 242 SGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEISGIWEK--------Q 293 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + ER + K + PDL+ V++ + A+ EA + R+P Sbjct: 294 EIDSNDNPTERALSPNETSKQVK-----------PDLLVVLNPTENRNALLEAIKSRVPT 342 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ + + Sbjct: 343 IAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLAR 390 >gi|207344804|gb|EDZ71820.1| YHL004Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 394 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 19/228 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 182 NITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSE 241 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S +K Sbjct: 242 SGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEISGIWEK--------Q 293 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + ER + K + PDL+ V++ + A+ EA + R+P Sbjct: 294 EIDSNDNPTERALSPNETSKQVK-----------PDLLVVLNPTENRNALLEAIKSRVPT 342 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ + + Sbjct: 343 IAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLAR 390 >gi|151943936|gb|EDN62229.1| mitochondrial ribosomal small subunit component [Saccharomyces cerevisiae YJM789] gi|323333319|gb|EGA74716.1| Mrp4p [Saccharomyces cerevisiae AWRI796] Length = 394 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 19/228 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 182 NITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSE 241 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S +K Sbjct: 242 SGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEISGIWEK--------Q 293 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + ER + K + PDL+ V++ + A+ EA + R+P Sbjct: 294 EIDSNDNPTERALSPNETSKQVK-----------PDLLVVLNPTENRNALLEAIKSRVPT 342 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ + + Sbjct: 343 IAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLAR 390 >gi|16603950|gb|AAL27221.1| ribosomal protein subunit 2 [Rhododendron arboreum] Length = 170 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 61/169 (36%), Positives = 96/169 (56%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +A ++ D R RIL V TK + +D V AA ++ + VN KWLGGM+TNW T + + Sbjct: 2 EACDLVFDAARRRKRILIVGTKKRVADLVARAAIKARCHYVNKKWLGGMLTNWSTTERRL 61 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 K + L L + K++ ++RK L+ L GI+ M +PD++ ++D ++E A Sbjct: 62 CKFKKLRLELKMVRRNLLKRDAARLKRKLSHLQTYLGGIKYMTAIPDIVIIIDQHKEYTA 121 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 ++E L IP + ++DTN +PDLVD+ IP NDD+ SI + A Sbjct: 122 LRECIILGIPTICLIDTNCDPDLVDFPIPANDDTRASIRFILSKLVFAI 170 >gi|6321782|ref|NP_011859.1| Mrp4p [Saccharomyces cerevisiae S288c] gi|417730|sp|P32902|RT04_YEAST RecName: Full=37S ribosomal protein MRP4, mitochondrial; Flags: Precursor gi|171982|gb|AAA34793.1| ribosomal protein [Saccharomyces cerevisiae] gi|500819|gb|AAB68428.1| Mrp4p: Mitochondrial ribosomal protein [Saccharomyces cerevisiae] gi|45270660|gb|AAS56711.1| YHL004W [Saccharomyces cerevisiae] gi|190405778|gb|EDV09045.1| mitochondrial ribosomal protein [Saccharomyces cerevisiae RM11-1a] gi|256269248|gb|EEU04571.1| Mrp4p [Saccharomyces cerevisiae JAY291] gi|259147022|emb|CAY80277.1| Mrp4p [Saccharomyces cerevisiae EC1118] gi|285809896|tpg|DAA06683.1| TPA: Mrp4p [Saccharomyces cerevisiae S288c] gi|323304711|gb|EGA58472.1| Mrp4p [Saccharomyces cerevisiae FostersB] gi|323308863|gb|EGA62099.1| Mrp4p [Saccharomyces cerevisiae FostersO] gi|323337412|gb|EGA78664.1| Mrp4p [Saccharomyces cerevisiae Vin13] Length = 394 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 19/228 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ +GV G LW + YI+ E HIIDL+QT+ L++A +V+ Sbjct: 182 NITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSE 241 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILF+ T+ + EAAK++ Y V+++W+ G +TN +S +K Sbjct: 242 SGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEISGIWEK--------Q 293 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + ER + K + PDL+ V++ + A+ EA + R+P Sbjct: 294 EIDSNDNPTERALSPNETSKQVK-----------PDLLVVLNPTENRNALLEAIKSRVPT 342 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 +A++DT+S P LV Y IPGNDDS RS+ ++A A G+ + + Sbjct: 343 IAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLAR 390 >gi|16603924|gb|AAL27208.1| ribosomal protein subunit 2 [Pyrola aphylla] gi|16603926|gb|AAL27209.1| ribosomal protein subunit 2 [Pyrola picta] Length = 173 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLVFDAASRGNQFLIVGTKKKVADLVARAAIRARCHYVNKKWLGGILTNWSTTE 60 Query: 111 QSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + K L E K++ ++R+ L+ L G++ M LPD++ ++D ++ Sbjct: 61 TRLAKFSGLRIEQTMGSLNRLPKRDAARLKRQLSYLQTNLGGLKYMKRLPDIVIIIDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 E A++E L IP + ++DTN +PD +D IP NDD+ S+ + + A Sbjct: 121 EYKALRECVILGIPTICLIDTNCDPDRIDLPIPANDDNRSSVQFILNKLVFAI 173 >gi|325088913|gb|EGC42223.1| mitochondrial ribosomal protein subunit S2 [Ajellomyces capsulatus H88] Length = 393 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 24/257 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 152 DITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVAR 211 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILFV T+ V+ AA+R+ V +W+ G +TN + + K +++N Sbjct: 212 NGGLILFVGTRKGQRRIVVNAAERAKGCHVFQRWIPGSLTNSEQILGHCGK-----QVVN 266 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ E AL ++ PDL+ ++ + + E IP Sbjct: 267 AFDEPLPGYEAQL---------DALPALK-----PDLVVCLNPLENRPLLHECGLHVIPT 312 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGADTKSAGE 242 + V+DT++NP V Y IP NDDS RS+A+ ++ A DG I + + G E Sbjct: 313 IGVIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDGQRIRLREAEEGKVMYPVNE 372 Query: 243 TVVHSK---EGMQLEED 256 + K EGM+ +E Sbjct: 373 ILEDWKPKSEGMREQEG 389 >gi|317142602|ref|XP_001818975.2| 40S ribosomal protein S2 [Aspergillus oryzae RIB40] Length = 468 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH WNP+ RYIF R+ H+I L T L++A +V+ + Sbjct: 153 SDVTLELLLASQTHLGHSTSRWNPQNSRYIFGIRDGIHVISLDVTAAYLRRAAKVVEEVA 212 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++ Sbjct: 213 ARGGLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCE-----TKVV 267 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ K +R K PDL+ ++ + + E +P Sbjct: 268 NAMDEEIPKYREALADRSVLK--------------PDLVVCLNPLENVVLLHECGLNNVP 313 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + V+DT+++P V Y IP NDDS R+I + ++ A G R+ Sbjct: 314 TIGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGVLGRAGEAGQQRRLENA 363 >gi|83745347|gb|ABC42385.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKEWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 +D V EAA ++ + VN KW GG++TNW + ++ L + + KK+ Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTNWSITEERLKYFNYLRVKEIKGGFDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+S+P Sbjct: 121 VVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIPTISLIDTDSDP 180 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 181 DLADIPIPA 189 >gi|194033316|ref|YP_002000449.1| ribosomal protein S2 [Oedogonium cardiacum] gi|156619060|gb|ABU88208.1| ribosomal protein S2 [Oedogonium cardiacum] gi|186968933|gb|ACC97256.1| ribosomal protein S2 [Oedogonium cardiacum] Length = 307 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +++L+ G+ +GH +P+M+R+I E NN ++I+L QT L+K L ++ + Sbjct: 53 KKMLKRGMHYGHNIVKCHPEMKRFIKTESNNKNLINLIQTKYYLKKCLWTLAQLSYKQKN 112 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKEN 127 ILFV T +S + AA ++ + VN +WLGGM+TNWKT+ + I KL LE E +K Sbjct: 113 ILFVGTTIPSSRFIGTAAIKTRSFFVNIRWLGGMLTNWKTIKKLIIKLHTLEKEQKSKIF 172 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + KK+ +++R +L++ L GI + P+++ + R+ A E ++L I ++ Sbjct: 173 KNLPKKQSAARQKERLRLEKYLKGIALIQKFPEIIIMTSQKRDISAALECQKLGITNFSI 232 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +DT+ +P L DY+IP NDDS+ SI + A G+ Sbjct: 233 IDTDCDPRLADYIIPANDDSASSIKFILYYYSKAIRTGL 271 >gi|238501438|ref|XP_002381953.1| 40S ribosomal protein S2, putative [Aspergillus flavus NRRL3357] gi|220692190|gb|EED48537.1| 40S ribosomal protein S2, putative [Aspergillus flavus NRRL3357] Length = 472 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH WNP+ RYIF R+ H+I L T L++A +V+ + Sbjct: 157 SDVTLELLLASQTHLGHSTSRWNPQNSRYIFGIRDGIHVISLDVTAAYLRRAAKVVEEVA 216 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++ Sbjct: 217 ARGGLILFVGTRKGQKRYVVRAAELAKGYHIFERWIPGSLTNGQQILGHCE-----TKVV 271 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ K +R K PDL+ ++ + + E +P Sbjct: 272 NAMDEEIPKYREALADRSVLK--------------PDLVVCLNPLENVVLLHECGLNNVP 317 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + V+DT+++P V Y IP NDDS R+I + ++ A G R+ Sbjct: 318 TIGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGVLGRAGEAGQQRRLENA 367 >gi|325973209|ref|YP_004250273.1| 30S ribosomal protein S2 [Mycoplasma suis str. Illinois] gi|323651811|gb|ADX97893.1| 30S ribosomal protein S2 [Mycoplasma suis str. Illinois] Length = 262 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 74/228 (32%), Positives = 140/228 (61%), Gaps = 4/228 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ +++E + G ++ LW PKM Y+ E HII+L +T+ LQ + D Sbjct: 8 ISLEKMIEFDLHLGAKSRLWEPKMAPYLLKEEYKKRHIINLEKTMEHLQSVYDYLYDLSR 67 Query: 65 RGGRILFVAT-KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G I+FV++ +D V E+AKR + + +WLGG+ TN+K V++++ KL +L++ L Sbjct: 68 SGLEIMFVSSKNKVIADIVKESAKRVNAFYITQRWLGGLFTNFKQVNKTLNKLTELDDFL 127 Query: 124 NKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +EN Q TKKE + +K+ K+++ DGI+ + LP+++ + + + + I+EA+++ Sbjct: 128 RQENLHQQLTKKEISQLRKKKQKIEKNYDGIKGLSKLPNVLVIFNPVNDLIPIKEAKKMD 187 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP+V VV++N+NP+++D+ IP N+ S +SI L +L+ A + + ++ Sbjct: 188 IPVVGVVNSNNNPEIIDFSIPANNFSPKSIYLIANLLCDAIAEAVGQE 235 >gi|312218088|emb|CBX98034.1| hypothetical protein [Leptosphaeria maculans] Length = 507 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 24/274 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP RYI R HII L T L++A +V+ + Sbjct: 191 ADVTLELLLASEAHQGHATSLWNPANARYIHGIRQGVHIISLEVTAAHLRRAAKVVQEVS 250 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG +LFV T+ V AA+ + Y + +W+ G +TN + + + +++ Sbjct: 251 RRGGIVLFVGTRDGQDRAVARAAELAKGYHLFERWIPGSITNGQQILGRCR-----IKVV 305 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N +++ E ER + PDL+ ++ + + E IP Sbjct: 306 NAKDEEVPGFEEQLYERPVLR--------------PDLVVCLNPLENYVLLHECALNNIP 351 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + V+DTN++P V Y IP NDDS R I + ++ A G ++ + + GE Sbjct: 352 TIGVIDTNADPTWVTYPIPANDDSLRCIQVIAGVLGRAGEVGQKQRLAAA-----AKGEV 406 Query: 244 VVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 +G+ + ++ + + + Sbjct: 407 TYRPAQGLVMPGSEDEPTNAAPEEVKPERIASAE 440 >gi|154278449|ref|XP_001540038.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413623|gb|EDN09006.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 424 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 21/246 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 183 DITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVAR 242 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILFV T+ V+ AA+R+ V +W+ G +TN + + K +++N Sbjct: 243 NGGLILFVGTRKGQRRIVVNAAERAKGCHVFQRWIPGSLTNSEQILGHCGK-----QVVN 297 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ E AL ++ PDL+ ++ + + E IP Sbjct: 298 AFDEPLPGYEAQL---------DALPALK-----PDLVVCLNPLENRPLLHECGLHVIPT 343 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGADTKSAGE 242 + ++DT++NP V Y IP NDDS RS+A+ ++ A DG I + + G E Sbjct: 344 IGIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEDGQRIRLREAEEGKVMYPVNE 403 Query: 243 TVVHSK 248 + K Sbjct: 404 ILEDWK 409 >gi|242766917|ref|XP_002341265.1| 40S ribosomal protein S2, putative [Talaromyces stipitatus ATCC 10500] gi|218724461|gb|EED23878.1| 40S ribosomal protein S2, putative [Talaromyces stipitatus ATCC 10500] Length = 344 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 19/226 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 111 AEVTLELLLASQSHLGHTTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVA 170 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG ILF T+ +CV+ AA+ + Y V +W+ G +TN + + + + +++ Sbjct: 171 RRGGLILFAGTRPGQKECVVRAAEMARGYHVFERWIPGSLTNGQQILGNCE-----IKVV 225 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ ++ ER K PDL+ ++ ++ + E IP Sbjct: 226 NALDEELPDYKQYLTERPVLK--------------PDLVICLNPIENEVLLHECGLNNIP 271 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + ++DT+++P V Y IP NDDS R + L + A +G + Sbjct: 272 TIGIIDTDADPTRVTYPIPANDDSLRCVQLIAGALGRAGEEGQRLR 317 >gi|83745351|gb|ABC42387.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] gi|83745355|gb|ABC42389.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKKWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 +D V EAA ++ + VN KW GG++TNW + ++ L + + KK+ Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTNWSITEERLKYFNYLRVKEIKGGFDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+S+P Sbjct: 121 VVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIPTISLIDTDSDP 180 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 181 DLADISIPA 189 >gi|295659251|ref|XP_002790184.1| 40S ribosomal protein mrp4 [Paracoccidioides brasiliensis Pb01] gi|226281889|gb|EEH37455.1| 40S ribosomal protein mrp4 [Paracoccidioides brasiliensis Pb01] Length = 406 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 19/229 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R+ HII L T L++A +V+ + Sbjct: 165 DITLELLLASQTHLGHATSLWNPANSEYIFGSRHGIHIISLDVTAAYLRRAAKVVHEVAK 224 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILFV T+ V+ AA R+ V +W+ G +TN + + +K + + Sbjct: 225 HGGLILFVGTRKGQRRIVVSAASRAKGCHVFQRWIPGSLTNSEQILGHCEK-KVVNAFDE 283 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K E+L + PDL+ ++ + + E IP Sbjct: 284 PLGGYEEKLEKLPALK------------------PDLVVCLNPLENRPLLHECGLHMIPT 325 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DT++NP V Y IP NDDS RS+A+ ++ A +G A + Sbjct: 326 IGIIDTDANPTHVTYPIPANDDSLRSVAVIAGVLGRAGEEGQAVRLQEA 374 >gi|328352590|emb|CCA38988.1| 37S ribosomal protein MRP4, mitochondrial [Pichia pastoris CBS 7435] Length = 380 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I+ LL +GV GH L+ P + +I+ E HIIDL QT+ L++A +V+ Sbjct: 163 NELSIKTLLAAGVHLGHSTSLYRPSTQPFIYGEYKGLHIIDLEQTLIYLKRASKVVQGVA 222 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +GG ILF+ T+ + EAA R Y V+S+W+ G +TN +S + Q+ Sbjct: 223 EKGGLILFLGTRDGQRRSLEEAASRVKGYFVSSRWIPGTLTNCTEISGTWQRHEV----- 277 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + T R + L + PDL+ +++ + A++EA R+P Sbjct: 278 ---DLEDTPTGRNLEGDELSSLVK-----------PDLIVILNPVENRNALKEAMYARVP 323 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + +VDT+S P LV Y +PGNDDS+RS L +++ A G R+ + Sbjct: 324 TIGIVDTDSEPSLVTYPVPGNDDSNRSTDLILGVLSKAGELGRRRRLEKV 373 >gi|254572573|ref|XP_002493396.1| hypothetical protein [Pichia pastoris GS115] gi|238033194|emb|CAY71217.1| Hypothetical protein PAS_c131_0005 [Pichia pastoris GS115] Length = 383 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I+ LL +GV GH L+ P + +I+ E HIIDL QT+ L++A +V+ Sbjct: 166 NELSIKTLLAAGVHLGHSTSLYRPSTQPFIYGEYKGLHIIDLEQTLIYLKRASKVVQGVA 225 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +GG ILF+ T+ + EAA R Y V+S+W+ G +TN +S + Q+ Sbjct: 226 EKGGLILFLGTRDGQRRSLEEAASRVKGYFVSSRWIPGTLTNCTEISGTWQRHEV----- 280 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + T R + L + PDL+ +++ + A++EA R+P Sbjct: 281 ---DLEDTPTGRNLEGDELSSLVK-----------PDLIVILNPVENRNALKEAMYARVP 326 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + +VDT+S P LV Y +PGNDDS+RS L +++ A G R+ + Sbjct: 327 TIGIVDTDSEPSLVTYPVPGNDDSNRSTDLILGVLSKAGELGRRRRLEKV 376 >gi|159130880|gb|EDP55993.1| 40S ribosomal protein S2, putative [Aspergillus fumigatus A1163] Length = 344 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 103 SDVTLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVA 162 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++ Sbjct: 163 ARGGLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTNGQQILGHCE-----TKVV 217 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ + L+ I+ PDL+ + + + E +P Sbjct: 218 NAFDEELP---------EFKDLRTDQPAIK-----PDLVVCFNPVENVVLLHECGLNNVP 263 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 264 TIGIIDTDADPTQVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKRRLEEA 313 >gi|119496469|ref|XP_001265008.1| 40S ribosomal protein S2, putative [Neosartorya fischeri NRRL 181] gi|119413170|gb|EAW23111.1| 40S ribosomal protein S2, putative [Neosartorya fischeri NRRL 181] Length = 344 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 103 SDITLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVA 162 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + +++ Sbjct: 163 ARGGLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTNGQQILGHCD-----TKVV 217 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ + L+ I+ PDL+ + + + E +P Sbjct: 218 NAFDEELP---------EFKDLRTDQPAIK-----PDLVVCFNPVENVVLLHECGLNNVP 263 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 264 TIGIIDTDADPTQVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKRRLEEA 313 >gi|296399414|gb|ADH10532.1| mitochondrial ribosomal protein S2 [Zonotrichia albicollis] Length = 239 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 99/232 (42%), Gaps = 38/232 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 38 FTLKDLFDARVHLGHKKGCRHRFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 97 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A+ +Y W GG++TN +L DL LN Sbjct: 98 GGIILFVSRRRQFCHLVESTARACGEYAHTRYWQGGLLTNAHIQFGPGVRLPDLLIFLNT 157 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +AI++A ++ IP V Sbjct: 158 LN--------------------------------------NVFEPHVAIRDAAKMNIPTV 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 VVDTN NP L+ Y IPGNDDS ++ L+C L I ++ + Sbjct: 180 GVVDTNCNPCLITYPIPGNDDSPAAVELYCRLFRMTIIRAKDKRRQSEAVEE 231 >gi|302306542|ref|NP_982956.2| ABR010Cp [Ashbya gossypii ATCC 10895] gi|299788566|gb|AAS50780.2| ABR010Cp [Ashbya gossypii ATCC 10895] Length = 391 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 123/237 (51%), Gaps = 19/237 (8%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A+ + +I +L +GV G LW + YI+ HIIDL+QT+ L++A +V+ Sbjct: 174 AIEKLSISKLAAAGVHLGQSTSLWRSSTQPYIYGSYKGIHIIDLNQTLFHLKRAAKVVEG 233 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 GG ILF+ T+ + AA+R V SKW+ G +TN +S + +++ Sbjct: 234 VAENGGLILFLGTREGQKPALRRAAERVRGCYVASKWIPGTLTNPIEISSVWGR-HEVDF 292 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 N + T++E ++I + PDL+ V++ + A++EA + R Sbjct: 293 EGNPTGRELTEEENISIIK------------------PDLIIVLNPTENRNALREAMQAR 334 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +P + ++DT+S P +V Y +PGNDDS RS++L ++A A G+A + + A ++ Sbjct: 335 VPTIGIIDTDSEPSMVTYPVPGNDDSLRSVSLLVSILAKAGERGLANRKEKLAALSE 391 >gi|70991114|ref|XP_750406.1| 40S ribosomal protein S2 [Aspergillus fumigatus Af293] gi|66848038|gb|EAL88368.1| 40S ribosomal protein S2, putative [Aspergillus fumigatus Af293] Length = 344 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 103 SDVTLELLLASQTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAYLRRAAKVVEEVA 162 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILFV T+ V+ AA+ + Y + +W+ G +TN + + + +++ Sbjct: 163 ARGGLILFVGTRKGQKRAVVRAAELAKGYHIFERWIPGSLTNGQQILGHCE-----TKVV 217 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ + L+ I+ PDL+ + + + E +P Sbjct: 218 NAFDEELP---------EFKDLRTDQPAIK-----PDLVVCFNPVENVVLLHECGLNNVP 263 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 ++++DT+++P V Y IP NDDS RS+A+ ++ A G R+ Sbjct: 264 TISIIDTDADPTQVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKRRLEEA 313 >gi|296399411|gb|ADH10530.1| mitochondrial ribosomal protein S2 [Zonotrichia albicollis] Length = 239 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 99/232 (42%), Gaps = 38/232 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 38 FTLKDLFDARVHLGHKKGCRHRFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 97 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A+ +Y W GG++TN +L DL L+ Sbjct: 98 GGIILFVSRRRQFCHLVESTARACGEYAHTRYWQGGLLTNAHIQFGPGVRLPDLLIFLST 157 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +AI++A ++ IP V Sbjct: 158 LN--------------------------------------NVFEPHVAIRDAAKMNIPTV 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 VVDTN NP L+ Y IPGNDDS ++ L+C L I ++ + Sbjct: 180 GVVDTNCNPCLITYPIPGNDDSPAAVELYCRLFRMTIIRAKDKRRQSEAVEE 231 >gi|196000004|ref|XP_002109870.1| hypothetical protein TRIADDRAFT_21033 [Trichoplax adhaerens] gi|190587994|gb|EDV28036.1| hypothetical protein TRIADDRAFT_21033 [Trichoplax adhaerens] Length = 242 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 45/240 (18%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +I+ L ++GV GH+ +WNP M++YI+ +R+ HIIDL++T L AL V S R Sbjct: 36 SIKSLFDAGVHLGHKTGVWNPLMKQYIYGDRHGNHIIDLNETDRHLFLALNVTSHIAYRK 95 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV + Q V + A+ ++ V +W GG++TN + Sbjct: 96 GVILFVCCRPQFQHLVQKTARECQEFFVIQRWRGGILTNAHKLL---------------- 139 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + LPDL+ + AI+E+ + IP + Sbjct: 140 ---------------------------PVPRLPDLIIFLSVPYNMDAIRESAQANIPSIG 172 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG--ADTKSAGETV 244 +VDT+ NP+L+ Y I GNDDS S+ L+C L ++A ++ ++ + D + GET Sbjct: 173 IVDTDCNPNLITYPIAGNDDSLSSLELYCRLFSTAILNAKVQRQNDDNYTIDKSNDGETP 232 >gi|16603948|gb|AAL27220.1| ribosomal protein subunit 2 [Oxydendrum arboreum] Length = 174 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 2/174 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D +RG + L V TK + +D V AA R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLFFDAASRGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R L + K +G K++ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRKLRRMEQKMGRGNRLLKRDAARLKRKLSHLQAYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 +E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI + A Sbjct: 121 KEYTALRECIILGIPTVCLIDTNCDPDLVDFPIPANDDTRASIQFILTKLVFAI 174 >gi|325846536|ref|ZP_08169451.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481294|gb|EGC84335.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 162 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 1/148 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++++LLE+GV FGH+ WNPKM ++IF ERN +IIDL++T + KA +VI D Sbjct: 1 MSVVSMKKLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLAKTSNQIDKAYEVIKDI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + GG ILFV TK QA D + + AKR QY V+++WLGGM+TN+ T+ S+ KL+ E + Sbjct: 61 ASEGGSILFVGTKKQAQDSIEQEAKRCGQYYVSNRWLGGMLTNFNTIRNSVNKLKKYETM 120 Query: 123 -LNKENQGFTKKERLNIERKRDKLKRAL 149 + KKE L ++ DKLK+ L Sbjct: 121 EEDGTFDLLPKKEVLQYNKEMDKLKKIL 148 >gi|213021694|ref|ZP_03336141.1| hypothetical protein Salmonelentericaenterica_02677 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 163 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 74/161 (45%), Positives = 109/161 (67%), Gaps = 1/161 (0%) Query: 83 MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERK 141 +A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L R+ Sbjct: 3 ERSANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRE 62 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVI 201 +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L IP+ A+VDTNS+PD VD+VI Sbjct: 63 LEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVI 122 Query: 202 PGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 PGNDD+ R+++L+ VA+ +G ++ + ++ E Sbjct: 123 PGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEAE 163 >gi|158300812|ref|XP_320639.4| AGAP011886-PA [Anopheles gambiae str. PEST] gi|157013341|gb|EAA00165.4| AGAP011886-PA [Anopheles gambiae str. PEST] Length = 211 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 38/233 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ V FGH+ N M+ Y++ R IIDL +TV L+ AL V + R Sbjct: 17 FTVEDLFKARVHFGHKEGTLNDNMKGYLYGSRLGHCIIDLDKTVDYLRAALNVAAHIAYR 76 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + AK ++ W GG+ TN K ++ +L DL N Sbjct: 77 DGIILFFNRNALNAHRVEQTAKECGEFAHTRYWRGGVFTNAKVQFGAVTRLPDLCIFFNT 136 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N DM A+++A ++ IP + Sbjct: 137 MNNVL-----------------------DM---------------HTAVRDAAKMNIPTI 158 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +VDTN NP+L+ Y +PGNDDS +I L+C L +A + G ++ +++ ++ + Sbjct: 159 GIVDTNCNPNLITYPVPGNDDSPAAIELYCKLFKNAILLGKEKRKAHLASEAQ 211 >gi|195928705|gb|ACG56032.1| ribosomal protein subunit 2 [Agalinis decemloba] Length = 168 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 1/167 (0%) Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 +A ++ + G + L V T+ A+D V AA ++ +CV KWLGGM+TNW T + Sbjct: 1 EACDLVCYAASGGKQFLIVGTRKHAADLVARAAIKARCHCVTKKWLGGMLTNWSTTETRL 60 Query: 114 QKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 QK RD E K++ ++R+ +L+ L GI+ M GLPD++ ++D ++E Sbjct: 61 QKFRDLRMEQKTGRLNRRPKRDAAVVKRQLSRLQTYLGGIKYMTGLPDIVIILDQHKEYT 120 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 A+QE L IP + ++DTN +PDL D IP NDD SI + + Sbjct: 121 ALQECITLGIPTICLIDTNCDPDLADISIPANDDGRSSIRFILNKLV 167 >gi|255942791|ref|XP_002562164.1| Pc18g03240 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586897|emb|CAP94548.1| Pc18g03240 [Penicillium chrysogenum Wisconsin 54-1255] Length = 348 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 19/226 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 Q ++ LL +G GH WNP+ RYIF R HII L T L++A +V+ + Sbjct: 106 SQISLEMLLAAGTHLGHSTSRWNPQNSRYIFGIREGVHIISLDVTAAHLRRAAKVVEEVA 165 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ARGG ILF T+ +++AA + Y + +W+ G +TN + + + +++ Sbjct: 166 ARGGLILFAGTRKGQKRAIVQAASLAKGYHIFERWIPGSLTNGEQILGHCE-----TKVV 220 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N ++ + +R K PDL+ ++ + + E +P Sbjct: 221 NALDEELPDFKSDLADRPSLK--------------PDLVICLNPLENVVLLHECGLNNVP 266 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + V+DT+++P V Y IP NDDS R+ L ++ A G R+ Sbjct: 267 TIGVIDTDADPTRVTYPIPSNDDSLRATCLIAGILGRAGEAGQLRR 312 >gi|83745349|gb|ABC42386.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 110/189 (58%), Gaps = 3/189 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKKWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 +D V EAA ++ + VN KW GG++TN + ++ L + + KK+ Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTNRSITEERLKYFNYLRVKEIKGGFDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+S+P Sbjct: 121 VVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIPTISLIDTDSDP 180 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 181 DLADISIPA 189 >gi|83745353|gb|ABC42388.1| ribosomal protein subunit 2 [Phelipanche purpurea subsp. bohemica] Length = 189 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 3/189 (1%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 FG+ + WNPKM YI E + HII+L++T L +A ++ + +RG + L V T++ Sbjct: 1 FGNHSKKWNPKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETI 60 Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 +D V EAA ++ + VN KW GG++TNW + ++ L + + KK+ Sbjct: 61 TADLVEEAAIKADCHFVNKKWTGGLLTNWSITEERLKYFNYLRVKEIKGGFDCLPKKDAA 120 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPIVAVVDTNSNP 194 ++R+ + ++ L GI++M GLPD++ ++ + N E A+QE L IP ++++DT+S+P Sbjct: 121 VVKRQLSRFQKTLGGIKNMSGLPDIVIILYQNKNEECKALQECITLGIPTISLIDTDSDP 180 Query: 195 DLVDYVIPG 203 DL D IP Sbjct: 181 DLADSSIPA 189 >gi|260940679|ref|XP_002614639.1| hypothetical protein CLUG_05417 [Clavispora lusitaniae ATCC 42720] gi|238851825|gb|EEQ41289.1| hypothetical protein CLUG_05417 [Clavispora lusitaniae ATCC 42720] Length = 442 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 71/234 (30%), Positives = 120/234 (51%), Gaps = 19/234 (8%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 +++ TI L+ +G GH +W P + +I+ E H+IDL++T+ L++A +VI Sbjct: 217 LSMDDVTISSLMAAGCHLGHAKAMWRPSTQPFIYAEYQGIHLIDLNETLAALRRATKVIE 276 Query: 61 DTVARGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 A+GG IL+V T + EAAKRS Y V+ +W+ G +TN+ VS+ I + Sbjct: 277 SIAAKGGVILYVGTSRNWEQHRALEEAAKRSRGYYVSHRWIPGTITNFTEVSKQIGGHQK 336 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 +E L NI + D L + PDL+ +++ + + E Sbjct: 337 IEVDLGDTPTNR------NISAQDDALIK-----------PDLVVLLNPVENRNCVNECI 379 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 + RIP + + DT+ P L+ Y IP NDDS R+ ++ C +++ AA G+ R++ Sbjct: 380 KSRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSVVCGILSKAAEQGVERRYKA 433 >gi|218463219|ref|ZP_03503310.1| 30S ribosomal protein S2 [Rhizobium etli Kim 5] Length = 122 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 106/122 (86%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM+ YIF +RNN HIIDL+QTVPML +ALQV+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 DTVARGGR+LFV TK QAS+ + ++AKRSAQY VNS+WLGGMMTNWKT+S SIQ+LR L+ Sbjct: 61 DTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLD 120 Query: 121 EL 122 E+ Sbjct: 121 EI 122 >gi|119187877|ref|XP_001244545.1| hypothetical protein CIMG_03986 [Coccidioides immitis RS] Length = 326 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + Sbjct: 93 SDITLELLLASQSHLGHATSLWNPRNSSYIFGIRDGIHIISLEVTAAYLRRAAKVVEEVA 152 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG ILFV T+ V+ AA+ + Y V +W+ G +TN + + + L+ ++E Sbjct: 153 RRGGLILFVGTRKGQRRAVVRAAELAQGYHVFERWVPGSITNGQQILGHCE-LKVVDEFD 211 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N+ L ++ + L PDL+ ++ + + E R IP Sbjct: 212 NE----------LPRYKENVSEQPVLR--------PDLVVCLNPIENEPLLTECRAYNIP 253 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DT+++ +V Y IP NDDS RS+A+ ++ A G + Sbjct: 254 TIGIIDTDADASMVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKARLQQS 303 >gi|224073802|ref|XP_002187161.1| PREDICTED: mitochondrial ribosomal protein S2 [Taeniopygia guttata] Length = 240 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 38/232 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 39 FTLKDLFDARVHLGHKKGCRHRFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 98 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A+ +Y W GG++TN + +L DL L+ Sbjct: 99 GGIILFVSRRRQFCHLVESTARACGEYAHTRYWQGGLLTNAHILFGPGVRLPDLLIFLST 158 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +AI++A ++ IP V Sbjct: 159 LN--------------------------------------NVFEPHVAIRDAAKMNIPTV 180 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 VVDTN NP L+ Y IPGNDDS ++ L+C L I ++ + Sbjct: 181 GVVDTNCNPCLISYPIPGNDDSPAAMELYCKLFRMTIIRAKDKRRQSEAVEE 232 >gi|16603940|gb|AAL27216.1| ribosomal protein subunit 2 [Vaccinium stamineum] Length = 174 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 2/174 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R L + K + K+ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRKLRRMEQKIGRRNRLLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 +E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI + A Sbjct: 121 KEYTALRECIILGIPTVCLIDTNCDPDLVDFPIPANDDTRASIQFILTKLVFAI 174 >gi|296808653|ref|XP_002844665.1| 40S ribosomal protein mrp4 [Arthroderma otae CBS 113480] gi|238844148|gb|EEQ33810.1| 40S ribosomal protein mrp4 [Arthroderma otae CBS 113480] Length = 332 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 111/248 (44%), Gaps = 17/248 (6%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP YI R HII L T L++A +V+ + Sbjct: 100 SDITLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKVVQEVA 159 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + V +W+ G +TN + Q + +L+ Sbjct: 160 RVGGLILFVGTRKGHKRAVVRAAELAQGCHVFDRWVPGSLTNSLQILQKCE-----VKLV 214 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++ I+ +R LK PDL+ + K +QE + IP Sbjct: 215 DALDREVDYPGFQKIDPERAPLK------------PDLVVCFNPLENKPLLQECASMNIP 262 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + V+DT+++P V Y IP NDDS R I++ ++ A +G ++ A Sbjct: 263 TIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGEEGQKKRLEQSAAGDLPYKPI 322 Query: 244 VVHSKEGM 251 V+ S++ M Sbjct: 323 VLQSQKDM 330 >gi|16603944|gb|AAL27218.1| ribosomal protein subunit 2 [Leucothoe axillaris] Length = 174 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 2/174 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R L + K + K+ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRKLRRMEQKMGRRNRLLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 +E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI + A Sbjct: 121 KEYTALRECIILGIPTVCLIDTNCDPDLVDFPIPANDDTRASIQFILTKLVFAI 174 >gi|16603946|gb|AAL27219.1| ribosomal protein subunit 2 [Pieris phillyreifolia] Length = 174 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 2/174 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D +RG + L V TK + +D V AA R+ + V KWLGGM+TNW T Sbjct: 1 FLSEACDLFFDAASRGKQFLIVGTKERVADSVARAAIRARCHYVTKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R L + K + K++ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRKLRRMEQKMGRRNRLLKRDAARLKRKLSHLQAYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 +E A++E L IP V+++DTN +PDLVD+ IP NDD+ SI + A Sbjct: 121 KEYTALRECIILGIPTVSLIDTNCDPDLVDFPIPANDDTRASIQFILSKLVFAI 174 >gi|303316726|ref|XP_003068365.1| 37S ribosomal protein MRP4, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108046|gb|EER26220.1| 37S ribosomal protein MRP4, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] Length = 330 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 19/231 (8%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + Sbjct: 96 LSDITLELLLASQSHLGHATSLWNPRNSSYIFGIRDGIHIISLEVTAAYLRRAAKVVEEV 155 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RGG ILFV T+ V+ AA+ + Y V +W+ G +TN + + + L+ ++E Sbjct: 156 ARRGGLILFVGTRKGQRRAVVRAAELAQGYHVFERWVPGSITNGQQILGHCE-LKVVDEF 214 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N+ L ++ + L PDL+ ++ + + E R I Sbjct: 215 DNE----------LPRYKENVSEQPVLR--------PDLVVCLNPIENEPLLTECRAYNI 256 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 P + ++DT+++ +V Y IP NDDS RS+A+ ++ A G + Sbjct: 257 PTIGIIDTDADALMVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKARLQQS 307 >gi|53131467|emb|CAG31821.1| hypothetical protein RCJMB04_11n4 [Gallus gallus] Length = 373 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 67/226 (29%), Positives = 96/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V GH+ + M+ YIF R + IIDL QT+ LQ AL + R Sbjct: 55 FTLKDLFDARVHLGHKKGCRHQFMKPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 114 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q V A+ +Y W GG++TN +L DL L+ Sbjct: 115 KGIILFVSRNRQFCHLVESTARECGEYAHTRYWQGGLLTNAHIQFGPGIRLPDLLIFLSS 174 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +AI++A ++ IP V Sbjct: 175 LN--------------------------------------NVFEPHVAIRDAAKMNIPTV 196 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVDTN NP L+ Y IPGNDDS ++ L+C L I ++ Sbjct: 197 GVVDTNCNPCLITYPIPGNDDSPTAMELYCKLFKMTIIHAKNKRKQ 242 >gi|146414307|ref|XP_001483124.1| hypothetical protein PGUG_05079 [Meyerozyma guilliermondii ATCC 6260] Length = 456 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 22/238 (9%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + TI LL +G GH +W P + YI+ E H+IDL +T+ L++A V+ Sbjct: 233 TINDVTIASLLAAGCHLGHAKSMWRPSTQPYIYGEYKGIHLIDLQETISALKRATSVMKG 292 Query: 62 TVARGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI--QKLR 117 +GG IL+V T + EAA+RS Y V+ +W+ G +TN+ VS+ + + + Sbjct: 293 VAKKGGIILYVGTLKHWEQHRALEEAAERSNGYYVSKRWIPGTITNFTEVSKQVGGGQRQ 352 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +++ N+ + E ++ + PDL+ +++ + I E Sbjct: 353 EIDIADEPTNRQIGEDEAASVLK------------------PDLVVILNPVENRNCINEC 394 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 +LRIP + + DTN P L+ Y IP NDDS+R+ + ++++AA +G + ++ + Sbjct: 395 IKLRIPTIGLCDTNMEPSLLTYPIPCNDDSTRASSYMTGILSTAAEEGREERIAFAQS 452 >gi|194856293|ref|XP_001968718.1| GG24347 [Drosophila erecta] gi|190660585|gb|EDV57777.1| GG24347 [Drosophila erecta] Length = 264 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTALHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N T + A+++A ++ IP + Sbjct: 178 QNNVMT--------------------------------------QHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 VVDTN NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GVVDTNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|125985943|ref|XP_001356735.1| GA15531 [Drosophila pseudoobscura pseudoobscura] gi|195148144|ref|XP_002015034.1| GL19496 [Drosophila persimilis] gi|54645060|gb|EAL33800.1| GA15531 [Drosophila pseudoobscura pseudoobscura] gi|194106987|gb|EDW29030.1| GL19496 [Drosophila persimilis] Length = 278 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L+ AL ++ R Sbjct: 66 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTAVHLRDALNFVAHIAFR 125 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 126 DGIILFFNRNALNAHLVEQKALEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 185 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP V Sbjct: 186 QNNVMS--------------------------------------QHTAVRDAAKMAIPTV 207 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G ++ +G Sbjct: 208 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRKRRELLG 256 >gi|310791949|gb|EFQ27476.1| ribosomal protein S2 [Glomerella graminicola M1.001] Length = 384 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 30/282 (10%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 A T+ L+ S GH LWNP RYI+ R HII L T L++A +V+ + Sbjct: 106 AAKDITLELLMASQTHMGHHTSLWNPANARYIYGVRQGIHIISLETTAAHLRRAARVVEE 165 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 RGG ILFV T+ + V +AA+ + + +KW G +TN +S+ + Sbjct: 166 VAYRGGLILFVGTRKGQMEIVTKAAQLARGCHLFTKWTPGNITNRDMISRG-----KAIK 220 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 ++++++ ERL ++ R L +PDL+ ++ + E Sbjct: 221 VVDEKDATLGGFERL------ERTSRPL--------IPDLVVCLNPLENYTLLYECGLAN 266 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-- 239 +P + ++DT++NPD V Y IP NDDS RS+A+ ++ A G R+ + + Sbjct: 267 VPTIGIIDTDANPDWVTYTIPANDDSYRSVAVIGGVLGRAGEQGQKRRLADAENGVVAWQ 326 Query: 240 ---------AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 GE + +E + E +S + G++ + Sbjct: 327 TPTETARYMRGEIKRYEQEIKRWERESAADAEKGSSGEQQLL 368 >gi|326930483|ref|XP_003211376.1| PREDICTED: hypothetical protein LOC100545851 [Meleagris gallopavo] Length = 1577 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 96/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME YIF R + IIDL QT+ LQ AL + R Sbjct: 1365 FSLKDLFDARVHLGHKKGCRHQFMEPYIFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYR 1424 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q V A+ +Y W GG++TN +L DL L+ Sbjct: 1425 KGIILFVSRNRQFCHLVESTARECGEYAHTRYWQGGLLTNAHIQFGPGIRLPDLLIFLSS 1484 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +AI++A ++ IP V Sbjct: 1485 LN--------------------------------------NVFEPHVAIRDAAKMNIPTV 1506 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVDTN NP L+ Y IPGNDDS S+ L+C L I ++ Sbjct: 1507 GVVDTNCNPCLITYPIPGNDDSPTSMELYCKLFKMTIIRAKNKRKQ 1552 >gi|256561159|gb|ACU83659.1| ribosomal protein subunit 2 [Euphrasia borneensis] gi|256561173|gb|ACU83666.1| ribosomal protein subunit 2 [Euphrasia hirtella] gi|256561175|gb|ACU83667.1| ribosomal protein subunit 2 [Euphrasia mirabilis] gi|256561177|gb|ACU83668.1| ribosomal protein subunit 2 [Euphrasia maximowiczii] gi|256561179|gb|ACU83669.1| ribosomal protein subunit 2 [Euphrasia picta] gi|256561185|gb|ACU83672.1| ribosomal protein subunit 2 [Euphrasia spectabilis] gi|256561187|gb|ACU83673.1| ribosomal protein subunit 2 [Euphrasia officinalis] Length = 162 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 57 QVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K Sbjct: 1 DLVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKF 60 Query: 117 RD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 RD E K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 61 RDLRMEQKTGRLNRLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 E L IP + ++DTN +P+L D IP NDD+ SI L + Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLILNK 162 >gi|165910483|gb|ABY73996.1| ribosomal protein S2 [Cuscuta reflexa] Length = 173 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 1/173 (0%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M +I +R HI ++++T L +A ++ D RG + L V T ++A+D V A+++ Sbjct: 1 MAPFIAAKRKGIHITNITRTARFLSEACDLVFDAARRGKKFLIVGTNNKAADSVARASRK 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKR 147 + + VN KWL GM+TNW + K RD E K++ +R+ +L+ Sbjct: 61 ARCHYVNKKWLAGMLTNWSITETRLNKFRDLRMEQKKGGLNHLLKRDATMFKRQLARLQT 120 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 L GI+ M GLPD++ +VD ++E A++E L IP + ++DTN +P+L D Sbjct: 121 YLGGIQYMTGLPDIVIIVDQHKEYTALRECITLGIPTICLIDTNCDPNLSDIS 173 >gi|241956832|ref|XP_002421136.1| mitochondrial ribosomal protein, small subunit, putative [Candida dubliniensis CD36] gi|223644479|emb|CAX41295.1| mitochondrial ribosomal protein, small subunit, putative [Candida dubliniensis CD36] Length = 462 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 123/241 (51%), Gaps = 22/241 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI +L+ +G GH + P M+ +I+ + HIIDL++T+ L A +VI V +G Sbjct: 239 TIAKLMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIEGVVEKG 298 Query: 67 GRILFVATKSQA---SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G +L+V T + +++A++RS Y VN +W+ G +TN+ V++ +++ E+ Sbjct: 299 GVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIKTKMEVD 358 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K+ + TK I+ PDL+ +++ + I+E IP Sbjct: 359 MKDQKITTKNSNRIIK-------------------PDLVVLLNPVENRNCIKECISAGIP 399 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + + DT+ P L+ Y IP NDDS RS+ L +++ +A G+ ++ S + ++ G+ Sbjct: 400 TIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSKSAESGLQKRISAIKKLEENDGKV 459 Query: 244 V 244 V Sbjct: 460 V 460 >gi|262186758|ref|YP_003276017.1| ribosomal protein S2 [Pleurozia purpurea] gi|237780755|gb|ACR19401.1| ribosomal protein S2 [Pleurozia purpurea] Length = 237 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 8/233 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I++LL + GHR + + Y++ RN IIDL +T+ L++A I + Sbjct: 7 LVIQKLLSTNAYLGHRIPTSD--FQGYLYGFRNEMAIIDLEKTLICLRRACNFIGSIIGA 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +L V T + + + AKR+ Q +N KW+GG +TNWK + + + +D N Sbjct: 65 KGHLLLVNTNPEYNRIIQRMAKRTNQSYINHKWIGGFLTNWKHMRRVQKHFQDFSAHPNL 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ + + + K+++ +GI +PD +++ N+ +AI EA +L+IPIV Sbjct: 125 KDAFTSSP--FDYFPRFRKMQKCFEGIVTHN-IPDCSVIMNANQNSMAILEANQLQIPIV 181 Query: 186 AVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 A+VD+N L+ Y +P NDDS + + LF +L+ I Q + Sbjct: 182 ALVDSNIPNRLHKLITYPVPVNDDSIKFVYLFRNLITKTVILSKRSQRPKVQV 234 >gi|256561163|gb|ACU83661.1| ribosomal protein subunit 2 [Euphrasia philippinensis] gi|256561165|gb|ACU83662.1| ribosomal protein subunit 2 [Euphrasia transmorrisonensis] gi|256561167|gb|ACU83663.1| ribosomal protein subunit 2 [Euphrasia transmorrisonensis var. durietziana] gi|256561169|gb|ACU83664.1| ribosomal protein subunit 2 [Euphrasia nankotaizanensis] gi|256561171|gb|ACU83665.1| ribosomal protein subunit 2 [Euphrasia tarokoana] Length = 162 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 57 QVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K Sbjct: 1 DLVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKF 60 Query: 117 RD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 RD E K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 61 RDLRMEQKMGRLNRLPKRDAAVLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 E L IP + ++DTN +P+L D IP NDD+ SI L + Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLILNK 162 >gi|91079290|ref|XP_972870.1| PREDICTED: similar to mitochondrial ribosomal protein S2 CG2937-PA [Tribolium castaneum] gi|270003534|gb|EEZ99981.1| hypothetical protein TcasGA2_TC002780 [Tribolium castaneum] Length = 249 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 38/228 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ N +M YI+ R I DL +T L++AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLNERMLPYIYGSRLGHIIFDLDKTADYLRRALNFAAHIAYR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ +Q S V + A+ ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFLLRGAQNSHLVEKTAQECGEFAHTRFWRGGIFTNSTKQFGAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + + A++++ ++ I + Sbjct: 178 LN--------------------------------------NVLLQHTAVRDSAKMGIATI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +VD+N +P+L+ Y +PGNDDS SI L+C L +A + G R+ M Sbjct: 200 GIVDSNCDPNLLTYPVPGNDDSPASIELYCKLFKAAILRGKERRKKDM 247 >gi|307069551|ref|YP_003878028.1| 30S ribosomal subunit protein S2 [Candidatus Zinderia insecticola CARI] gi|306482811|gb|ADM89682.1| 30S ribosomal subunit protein S2 [Candidatus Zinderia insecticola CARI] Length = 241 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 84/218 (38%), Positives = 129/218 (59%), Gaps = 2/218 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 TI ++++S + GH+ NPKM +YI +N HIID+ +T+ + +KAL+ IS A Sbjct: 2 LTINKIIKSKIHLGHKKCFLNPKMSKYIIGCKNKIHIIDIKKTIILYKKALEYISILSAN 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 IL V TK D + AKR +N +WLGG TN++ ++ SI+ + + K Sbjct: 62 NRTILLVCTKKNTRDIIKSEAKRGGLPYINQRWLGGTFTNYEIINNSIK--KFKNMIKKK 119 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + K N +K KLK+ + G++ M LPD +FV+DT K I+EA+ L+IPI+ Sbjct: 120 KKIKLNTKGTSNFIKKFKKLKKFIGGMKMMNNLPDAIFVIDTEFHKNVIKEAKILKIPII 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A+VDTN+NP+ +DY+IPGN+DS SI L+ + + I Sbjct: 180 AIVDTNNNPENIDYIIPGNNDSIISIKLYIKNLINTII 217 >gi|320038180|gb|EFW20116.1| 40S ribosomal protein S2 [Coccidioides posadasii str. Silveira] Length = 330 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + Sbjct: 97 SDITLELLLASQSHLGHATSLWNPRNSSYIFGIRDGIHIISLEVTAAYLRRAAKVVEEVA 156 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG ILFV T+ V+ AA+ + Y V +W+ G +TN + + + L+ ++E Sbjct: 157 RRGGLILFVGTRKGQRRAVVRAAELAQGYHVFERWVPGSITNGQQILGHCE-LKVVDEFD 215 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N+ L ++ + L PDL+ ++ + + E R IP Sbjct: 216 NE----------LPRYKENVSEQPVLR--------PDLVVCLNPIENEPLLTECRAYNIP 257 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DT+++ +V Y IP NDDS RS+A+ ++ A G + Sbjct: 258 TIGIIDTDADALMVTYPIPANDDSLRSVAVIAGVLGRAGEAGQKARLQQS 307 >gi|83745420|gb|ABC42417.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ V Sbjct: 1 KWNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVA 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL + K++ +R+ Sbjct: 61 CAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGGFKRLPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|195437396|ref|XP_002066626.1| GK24593 [Drosophila willistoni] gi|194162711|gb|EDW77612.1| GK24593 [Drosophila willistoni] Length = 275 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L+ AL ++ R Sbjct: 67 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTAAHLRDALNFVAHIAFR 126 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 127 DGIILFFNRNALNSHLVEQKALEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 186 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP V Sbjct: 187 QNNVLS--------------------------------------QHTAVRDAAKMAIPTV 208 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G ++ +G Sbjct: 209 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRKRRELLG 257 >gi|256561189|gb|ACU83674.1| ribosomal protein subunit 2 [Euphrasia petiolaris] Length = 162 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 57 QVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K Sbjct: 1 DLVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKF 60 Query: 117 RD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 RD E K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 61 RDLRMEQKTGRLNRLPKRDAAVVKRQLSHLQTYLGGIQYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 E L IP + ++DTN +P+L D IP NDD+ SI L + Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLILNK 162 >gi|189194455|ref|XP_001933566.1| 37S ribosomal protein MRP4, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979130|gb|EDU45756.1| 37S ribosomal protein MRP4, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 413 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 19/231 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP RYI R HII L T L++A +++ + Sbjct: 114 ADVTLELLLASEAHQGHVTSLWNPANARYIHGIRQGVHIISLEVTAAHLRRAAKIVQEVS 173 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 R G ILFV T+ V AA+ + Y + +W+ G +TN + + + +++ Sbjct: 174 RRAGMILFVGTRDGQERAVARAAELAKGYHLFERWIPGSITNGQQILGKCR-----TKVV 228 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N+ ++ E + R + PDL+ ++ + + E IP Sbjct: 229 NELDEEVPGFEEQLLARPVLR--------------PDLVVCMNPLENYVLLHECALNNIP 274 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 + V+DTN++P V Y IP NDDS R I + ++ A G ++ + Sbjct: 275 TIGVIDTNADPTWVTYPIPANDDSLRCIQVIAGVLGRAGEAGQKQRLAAAA 325 >gi|238883002|gb|EEQ46640.1| conserved hypothetical protein [Candida albicans WO-1] Length = 461 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 123/241 (51%), Gaps = 22/241 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI +L+ +G GH + P M+ +I+ + HIIDL++T+ L A +VI V +G Sbjct: 238 TIAKLMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIEGVVEKG 297 Query: 67 GRILFVATKSQA---SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G +L+V T + +++A++RS Y VN +W+ G +TN+ V++ +++ E+ Sbjct: 298 GVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIKTKMEVD 357 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K+ + TK I+ PDL+ +++ + I+E IP Sbjct: 358 MKDQKITTKNSNKIIK-------------------PDLVVLLNPVENRNCIKECISAGIP 398 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + + DT+ P L+ Y IP NDDS RS+ L +++ +A G+ ++ S + ++ G+ Sbjct: 399 TIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSKSAESGLQKRISAVKKLEENDGKV 458 Query: 244 V 244 V Sbjct: 459 V 459 >gi|256561161|gb|ACU83660.1| ribosomal protein subunit 2 [Euphrasia transmorrisonensis var. durietziana] Length = 162 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 57 QVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 ++ D +RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K Sbjct: 1 DLVFDAASRGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKF 60 Query: 117 RD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 RD E K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++ Sbjct: 61 RDLRMEQKMGRLNRLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALR 120 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 E L IP + ++DTN +P+L D IP NDD+ SI L + Sbjct: 121 ECITLGIPTICLIDTNCDPNLADISIPANDDAISSIRLILNK 162 >gi|190348517|gb|EDK40981.2| hypothetical protein PGUG_05079 [Meyerozyma guilliermondii ATCC 6260] Length = 456 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 22/238 (9%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + TI LL +G GH +W P + YI+ E H+IDL +T+ L++A V+ Sbjct: 233 TINDVTIASLLAAGCHLGHAKSMWRPSTQPYIYGEYKGIHLIDLQETISALKRATSVMKG 292 Query: 62 TVARGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI--QKLR 117 +GG IL+V T + EAA+RS Y V+ +W+ G +TN+ VS+ + + + Sbjct: 293 VAKKGGIILYVGTLKHWEQHRALEEAAERSNGYYVSKRWIPGTITNFTEVSKQVGGGQRQ 352 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +++ N+ + E ++ + PDL+ +++ + I E Sbjct: 353 EIDIADEPTNRQIGEDEAASVLK------------------PDLVVILNPVENRNCINEC 394 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + RIP + + DTN P L+ Y IP NDDS+R+ + ++++AA +G + ++ + Sbjct: 395 IKSRIPTIGLCDTNMEPSLLTYPIPCNDDSTRASSYMTGILSTAAEEGREERIAFAQS 452 >gi|156538291|ref|XP_001603481.1| PREDICTED: similar to RE59650p [Nasonia vitripennis] Length = 256 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 38/224 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ + M +I+ R I DL T +L++AL + Sbjct: 64 FTVKDLFDARVHYGHKEGTLDEHMRPFIYGSRMGHLIFDLDHTAELLREALNFTAHIAYN 123 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ Q + V + AK ++ +W GG+ TN ++ +L DL L+ Sbjct: 124 QGIILFLCRNPQNTHLVEKTAKECGEFAHTRRWRGGIFTNSTKEFGAVTRLPDLCIFLST 183 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N E A+ A ++ IP V Sbjct: 184 LNTVML--------------------------------------EHRAVSNAAKMLIPTV 205 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +VD+N NP+L+ Y +PGNDD+ ++ L+C L A + G + Sbjct: 206 GIVDSNCNPNLITYPVPGNDDTPCAVELYCKLFKQAILLGKEAR 249 >gi|291230876|ref|XP_002735378.1| PREDICTED: mitochondrial ribosomal protein S2-like [Saccoglossus kowalevskii] Length = 300 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L + V GH+ L N M +YIF R IIDL +TV LQ AL S R Sbjct: 105 FTLQDLFRANVHVGHKTGLLNVHMRKYIFGVRQKICIIDLDKTVKHLQIALNFASHIAYR 164 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ Q + V + AK ++ +W GG TN KL DL LN Sbjct: 165 KGSILFINRSLQFTHLVEKTAKECGEFAQTRRWQGGCFTNSLVQYGPEVKLPDLVVFLNT 224 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + +E A++++ ++ IP + Sbjct: 225 QN--------------------------------------NVFQEHAAVRDSAKMNIPTI 246 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +VDTN NP+L+ Y +PGNDD+ ++ L+C L +A + + + D Sbjct: 247 GIVDTNCNPNLITYPVPGNDDTPDAMELYCRLFKNAILKAKQMRKEFDDHD 297 >gi|68475753|ref|XP_718083.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] gi|68475888|ref|XP_718017.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] gi|46439762|gb|EAK99076.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] gi|46439837|gb|EAK99150.1| likely mitochondrial ribosomal protein (E. coli S2) [Candida albicans SC5314] Length = 460 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 123/241 (51%), Gaps = 22/241 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI +L+ +G GH + P M+ +I+ + HIIDL++T+ L A +VI V +G Sbjct: 237 TIAKLMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIEGVVEKG 296 Query: 67 GRILFVATKSQA---SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G +L+V T + +++A++RS Y VN +W+ G +TN+ V++ +++ E+ Sbjct: 297 GVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIKTKMEVD 356 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K+ + TK I+ PDL+ +++ + I+E IP Sbjct: 357 MKDQKITTKNSNKIIK-------------------PDLVVLLNPVENRNCIKECISAGIP 397 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + + DT+ P L+ Y IP NDDS RS+ L +++ +A G+ ++ S + ++ G+ Sbjct: 398 TIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSKSAESGLQKRISAVKKLEENDGKV 457 Query: 244 V 244 V Sbjct: 458 V 458 >gi|330920844|ref|XP_003299174.1| hypothetical protein PTT_10115 [Pyrenophora teres f. teres 0-1] gi|311327245|gb|EFQ92720.1| hypothetical protein PTT_10115 [Pyrenophora teres f. teres 0-1] Length = 419 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 29/284 (10%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP RYI R HII L T L++A +++ + Sbjct: 120 ADVTLELLLASEAHQGHVTSLWNPANARYIHGVRQGVHIISLEVTAAHLRRAAKIVQEVC 179 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 R G +LFV T+ V AA+ + Y + +W+ G +TN + + + +++ Sbjct: 180 RRAGMVLFVGTRDGQERAVARAAELAKGYHLFERWIPGSITNGQQILGKCR-----TKVV 234 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N+ ++ E +ER + PDL+ ++ + + E IP Sbjct: 235 NELDEEVPGFEEQLLERPVLR--------------PDLVVCMNPLENYVLLHECALNNIP 280 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD------- 236 + V+DTN++P V Y IP NDDS R I + ++ A G ++ + Sbjct: 281 TIGVIDTNADPTWVTYPIPANDDSLRCIQVIAGVLGRAGEAGQKQRLAAAAQGTITYRPA 340 Query: 237 ---TKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 TK+ + + + + DS S + + + V E + Sbjct: 341 EGLTKAGADVDGAASDAGVITSDSTSRMGNSVPRESVDETAETL 384 >gi|16603908|gb|AAL27200.1| ribosomal protein subunit 2 [Hemitomes congestum] Length = 161 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 60/161 (37%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG + L V TK +D V AA ++ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLIFDAASRGNQFLIVGTKEGVADLVARAAIKARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF-TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + K RDL+ TK + ++R+ L+ L G++ M LPD++ ++D ++ Sbjct: 61 KRLHKFRDLKIKQKMGRLKHLTKGDTTKLKRQLSHLQAYLGGVKYMKRLPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 E +A++E L IP + ++DTN +PDLVD+ IP NDD+ S Sbjct: 121 EYIALRECITLGIPTICLIDTNCDPDLVDFPIPANDDARSS 161 >gi|254708528|ref|ZP_05170356.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 117 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 82/117 (70%), Positives = 99/117 (84%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 1 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR Sbjct: 61 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLR 117 >gi|83745418|gb|ABC42416.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745422|gb|ABC42418.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745424|gb|ABC42419.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745426|gb|ABC42420.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745434|gb|ABC42424.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745440|gb|ABC42427.1| ribosomal protein subunit 2 [Phelipanche ramosa] gi|83745442|gb|ABC42428.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ V Sbjct: 1 KWNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVA 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL + K++ +R+ Sbjct: 61 CAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKRLPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|28574694|ref|NP_523473.2| mitochondrial ribosomal protein S2 [Drosophila melanogaster] gi|195576610|ref|XP_002078168.1| GD22685 [Drosophila simulans] gi|21428678|gb|AAM49999.1| RE59650p [Drosophila melanogaster] gi|28380249|gb|AAF50970.2| mitochondrial ribosomal protein S2 [Drosophila melanogaster] gi|194190177|gb|EDX03753.1| GD22685 [Drosophila simulans] gi|220949104|gb|ACL87095.1| mRpS2-PA [synthetic construct] gi|220958178|gb|ACL91632.1| mRpS2-PA [synthetic construct] Length = 264 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|116204175|ref|XP_001227898.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51] gi|88176099|gb|EAQ83567.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51] Length = 1086 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 27/280 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 T+ L+ + V GH WNP +RYI+ +R HII L T L++A +V+ + G Sbjct: 808 TLEMLMAAQVHMGHHISQWNPANQRYIYGQRAGIHIISLETTATHLRRAARVVEEVAYYG 867 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 G ILFV T+ + V+ AA+ + Y + KW G +TN + S + ++++ + Sbjct: 868 GLILFVGTRKEHMPVVVRAAELAQGYHLFQKWTPGAITNRDIILASGE-----LKIVDGQ 922 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 ++ E +R+ +PDL+ ++ + E IP + Sbjct: 923 DKVLDGFETHLRDRR--------------PVVPDLVVCLNPLENYPLLHECGVANIPTIG 968 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS-----AG 241 ++DT+++P V Y IP NDDS RS+ L ++ A G R+ + S Sbjct: 969 LIDTDADPTWVTYQIPANDDSLRSVTLLAGVLGRAGERGQQRRLADADDGVISWRSPRDV 1028 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLDG---QEVAVVPELMS 278 ET + + EE+ + + +G + A + MS Sbjct: 1029 ETFMEKDALAKAEEELRQIIKARKEGILDDKPATEEDFMS 1068 >gi|195471357|ref|XP_002087971.1| GE14662 [Drosophila yakuba] gi|194174072|gb|EDW87683.1| GE14662 [Drosophila yakuba] Length = 264 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|83745438|gb|ABC42426.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ V Sbjct: 1 KWNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVA 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL + K++ +R+ Sbjct: 61 CAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKRLPKRDAAVSKRQF 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|195342548|ref|XP_002037862.1| GM18067 [Drosophila sechellia] gi|194132712|gb|EDW54280.1| GM18067 [Drosophila sechellia] Length = 265 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDERMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + S V A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|321468436|gb|EFX79421.1| hypothetical protein DAPPUDRAFT_304832 [Daphnia pulex] Length = 259 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F ++ L ++ V +GH++ +P M+ YIF R I DL +T +LQ AL + + Sbjct: 68 FRLKDLFDAKVHYGHKDGTLHPNMKPYIFGSRLGHIIFDLDKTTELLQDALNFTAHIAYK 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q + V AAK + +Y +W ++TN + + + + +L DL +++ Sbjct: 128 GGIILFVSHYPQHTLTVENAAKEAGEYAHAREWDFHLLTNSEKIYKGVTRLPDLIIMVST 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N +E A+++A ++ IP + Sbjct: 188 LNP--------------------------------------QMQEHTAVRDAAKMCIPTI 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VD+NSNP+L+ Y +PGNDDS ++ L+C+L A + G +++ Sbjct: 210 GIVDSNSNPNLITYPVPGNDDSPTAVQLYCNLFRDAILLGKSKKSE 255 >gi|11467163|ref|NP_054464.1| ribosomal protein S2 [Marchantia polymorpha] gi|585954|sp|P26864|RT02_MARPO RecName: Full=Ribosomal protein S2, mitochondrial gi|250820|gb|AAB22412.1| ribosomal protein S2 [Marchantia polymorpha=liverwort, Peptide Mitochondrial, 237 aa] gi|786247|gb|AAC09461.1| rps2 [Marchantia polymorpha] Length = 237 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 120/228 (52%), Gaps = 8/228 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I++LL + GHR + + Y++ RN IIDL +T+ L++ +I ++ Sbjct: 7 LVIQKLLSTNAYLGHRIPTSD--FQGYLYGFRNEMAIIDLEKTLICLRRTCNLIGSIISA 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G +L V T + + + + AK++ Q +N KW+GG +TNWK + + + +D N Sbjct: 65 KGHLLLVNTNPEYNKIIQQMAKKTNQSYINHKWIGGFLTNWKHMKKVKKHFQDFSAHPNL 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ + + + K+++ +GI +PD + +++ N+ +AI EA +L+IPIV Sbjct: 125 KDAFTSSP--FDYFPRFKKMQKCFEGIMTHN-IPDCLVIINANQNSMAILEANQLQIPIV 181 Query: 186 AVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 A+VD+N L+ Y +P NDDS + + LFC+L+ I Q Sbjct: 182 ALVDSNIPNRLHKLITYPVPVNDDSIKFVYLFCNLITKTVILSKRSQR 229 >gi|315054367|ref|XP_003176558.1| 40S ribosomal protein mrp4 [Arthroderma gypseum CBS 118893] gi|311338404|gb|EFQ97606.1| 40S ribosomal protein mrp4 [Arthroderma gypseum CBS 118893] Length = 334 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 17/232 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP YI R HII L T L++A +++ + Sbjct: 100 SDVTLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVA 159 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + V +W+ G +TN + + +L+ Sbjct: 160 RVGGLILFVGTRKGHKRAVVRAAELAQGCHVFDRWVPGSLTNALQLLNKCE-----VKLV 214 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++ E ++ +R LK PDL+ + K +QE + IP Sbjct: 215 DALDRTVDHPEFQGVDIERAPLK------------PDLVVCFNPLENKPLLQECATMNIP 262 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + V+DT+++P V Y IP NDDS R I++ ++ A G + A Sbjct: 263 TIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERGQQERLKQSAA 314 >gi|195401303|ref|XP_002059253.1| GJ16130 [Drosophila virilis] gi|194156127|gb|EDW71311.1| GJ16130 [Drosophila virilis] Length = 271 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 38/250 (15%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L+ AL V++ R Sbjct: 59 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGSRLGHLIFDLDKTAAHLRDALNVVAHIAFR 118 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 119 DGIILFFNRNALNAHLVEQKAMEAGEFSHTRFWRGGIFTNANVQFHAVTRLPDLCIFLNT 178 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP V Sbjct: 179 QN--------------------------------------NVLAQHTAVRDAAKMAIPTV 200 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A G ++ +G + Sbjct: 201 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRRELLGLPPLDEAQFKA 260 Query: 246 HSKEGMQLEE 255 + + Sbjct: 261 SRSRAPKASQ 270 >gi|213407902|ref|XP_002174722.1| 40S ribosomal protein mrp4 [Schizosaccharomyces japonicus yFS275] gi|212002769|gb|EEB08429.1| 40S ribosomal protein mrp4 [Schizosaccharomyces japonicus yFS275] Length = 247 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 22/208 (10%) Query: 19 GHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQA 78 GH LWNP + +I+ RN HII L +T+ L++A+ VI + G ILFV TK Sbjct: 61 GHATSLWNPMNQPFIYGIRNGIHIISLDKTLVFLRRAINVIQEVARTKGIILFVGTKPGQ 120 Query: 79 SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNI 138 VM AAKR Y + ++W+ G++TN KTV ++ + KE + T Sbjct: 121 KLSVMAAAKRCNGYFIFNRWVPGLLTNAKTVQPTLGGSLKTVDQDGKEVRAPTPSFLY-- 178 Query: 139 ERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVD 198 PDL+ +++ +EA+R+ +P + +VDTN +P LV Sbjct: 179 --------------------PDLIVILNPLENINVCKEAQRVSVPTIGIVDTNVDPRLVT 218 Query: 199 YVIPGNDDSSRSIALFCDLVASAAIDGI 226 Y IP NDDS R L L++ AA +G+ Sbjct: 219 YPIPANDDSLRCSDLIVGLLSQAACEGM 246 >gi|170056282|ref|XP_001863960.1| mitochondrial 28S ribosomal protein S2 [Culex quinquefasciatus] gi|167876029|gb|EDS39412.1| mitochondrial 28S ribosomal protein S2 [Culex quinquefasciatus] Length = 244 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 38/231 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ V GH+ + M+ Y++ R +IDL +T L+ AL V + R Sbjct: 51 FTVEDLFKANVHLGHKEGTLHDNMKGYLYGSRLGHCVIDLDKTAEYLRHALNVTAHIAYR 110 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF +Q V + A +Y W GG+ TN ++ +L DL LN Sbjct: 111 GGIILFFNRTAQNGHIVEKTAMECGEYSHTRFWRGGVFTNANVQFGAVTRLPDLCIFLNT 170 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + T + A+++ ++ IP V Sbjct: 171 LSNVLT--------------------------------------QHSAVKDCAKMAIPTV 192 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 +VDTN NP+L+ Y +PGNDD+ +IAL+C L SA + G A+ + Sbjct: 193 GIVDTNCNPNLITYPVPGNDDTPAAIALYCKLFKSAILLGKAKMKEDAQEN 243 >gi|157819459|ref|NP_001102046.1| 28S ribosomal protein S2, mitochondrial [Rattus norvegicus] gi|149039193|gb|EDL93413.1| mitochondrial ribosomal protein S2 (predicted), isoform CRA_b [Rattus norvegicus] Length = 291 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 136 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPTVRLPDLIVFLHT 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 196 LN--------------------------------------NVFESHVAVRDAAKMNIPTV 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VDTN NP L+ Y IPGNDDS ++I LFC L + ++ Sbjct: 218 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRRQMEA 266 >gi|110589440|gb|ABG77229.1| 30S ribosomal subunit protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 140 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 64/136 (47%), Positives = 88/136 (64%), Gaps = 2/136 (1%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+P+ A+ I Sbjct: 1 MSSVSMRQMLEAGVHFGHQTRYWNPKMSPYIFGHRNKIHIVNLEKTLPLYNDAMNYIGSL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 A GG+ILFV TK A D V E A+R VN +WLGGM+TN+KT+ QSI++L++LE + Sbjct: 61 SANGGKILFVGTKRAARDAVREEAQRCGMPFVNHRWLGGMLTNFKTIKQSIKRLKELEAM 120 Query: 123 LNKEN--QGFTKKERL 136 + Q F KKE L Sbjct: 121 FEDGSVEQRFNKKEGL 136 >gi|260593698|ref|NP_001159503.2| 28S ribosomal protein S2, mitochondrial isoform 2 [Mus musculus] Length = 272 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 57 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 116 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 117 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 176 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 177 LN--------------------------------------NVFEPHVAVRDAAKMNIPTV 198 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VDTN NP L+ Y IPGNDDS ++I LFC L + ++ Sbjct: 199 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRRQMEA 247 >gi|148676435|gb|EDL08382.1| mitochondrial ribosomal protein S2, isoform CRA_a [Mus musculus] Length = 337 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 122 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 181 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 182 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 241 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 242 LN--------------------------------------NVFEPHVAVRDAAKMNIPTV 263 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VDTN NP L+ Y IPGNDDS ++I LFC L + ++ Sbjct: 264 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRRQMEA 312 >gi|260593696|ref|NP_536700.3| 28S ribosomal protein S2, mitochondrial isoform 1 [Mus musculus] gi|24212377|sp|Q924T2|RT02_MOUSE RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|15080678|dbj|BAB62530.1| mitochondrial ribosomal protein S2 [Mus musculus] gi|26346080|dbj|BAC36691.1| unnamed protein product [Mus musculus] gi|38051922|gb|AAH60503.1| Mitochondrial ribosomal protein S2 [Mus musculus] gi|74139196|dbj|BAE38484.1| unnamed protein product [Mus musculus] gi|74152224|dbj|BAE32396.1| unnamed protein product [Mus musculus] gi|123857711|emb|CAM24087.1| mitochondrial ribosomal protein S2 [Mus musculus] Length = 291 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 136 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 196 LN--------------------------------------NVFEPHVAVRDAAKMNIPTV 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VDTN NP L+ Y IPGNDDS ++I LFC L + ++ Sbjct: 218 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRRQMEA 266 >gi|26341776|dbj|BAC34550.1| unnamed protein product [Mus musculus] Length = 291 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 136 KGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHT 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 196 LN--------------------------------------NVFEPHVAVRDAAKMNIPTV 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VDTN NP L+ Y IPGNDDS ++I LFC L + ++ Sbjct: 218 GIVDTNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRRQMEA 266 >gi|167515424|ref|XP_001742053.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778677|gb|EDQ92291.1| predicted protein [Monosiga brevicollis MX1] Length = 233 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 31/224 (13%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI +L ++ V GH+ +WNPKME YI+ ++HIIDL+ T L+ AL++ A Sbjct: 36 RVTIDELFDARVHLGHKRGMWNPKMEPYIYTTLADSHIIDLNVTKAHLEHALELTRRISA 95 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG +LFV + Q + A+R +Y V KW+GG +TN Sbjct: 96 DGGVVLFVGGRPQFEGLIRHEARRCGEYFVTRKWIGGTLTNNTEART------------- 142 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + + L G+R +PDL+ K+ ++EA IP Sbjct: 143 --------------SHRLVHGVQTLGGLR----MPDLILFFCVPVSKVGVKEALDCDIPS 184 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 V ++DT+ +PD V YV+PGNDD++++I + A A + G Sbjct: 185 VGIIDTDGDPDGVTYVVPGNDDTTQAIEFYVRKFADAVLAGKEA 228 >gi|298252791|ref|ZP_06976585.1| ribosomal protein S2 [Gardnerella vaginalis 5-1] gi|297533155|gb|EFH72039.1| ribosomal protein S2 [Gardnerella vaginalis 5-1] Length = 203 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 2/203 (0%) Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL--NKENQG 129 + TK QA + V A R V +WLGGM+TN++TVS +++L++LEE+ + G Sbjct: 1 MGTKKQAQEAVQNQATRVNMPYVCERWLGGMLTNFQTVSTRVKRLKELEEMDFSDVRGSG 60 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 TKKE L +ER++DKL + L GIR+M P MFVVD N+E LA++EA +L IP+VA+VD Sbjct: 61 LTKKELLLLEREKDKLSKQLGGIRNMNRTPSAMFVVDINKEALAVEEAHKLGIPVVAIVD 120 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKE 249 TN++P+ V+Y IP NDD+ R I L L+A A +G+ + + + ++ Sbjct: 121 TNTDPEAVEYPIPANDDAIRGIELLTSLMADAVAEGLLEHAGKGAKSEGNDAQPMAAWEK 180 Query: 250 GMQLEEDSQSSESSVLDGQEVAV 272 + +E ++ + + E Sbjct: 181 ELLTKEGEAEAKPAKEENTEANA 203 >gi|322785450|gb|EFZ12121.1| hypothetical protein SINV_06769 [Solenopsis invicta] Length = 266 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 38/228 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ N ME +IF R IIDL QT +L++AL + R Sbjct: 74 FTVKDLYDARVHYGHKETSLNEHMETFIFGSRLGHLIIDLDQTAELLRQALNFTAHIAFR 133 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF++ Q + V + A+ +Y W G+ N + ++ +L DL L Sbjct: 134 GGIILFISRNPQVTHLVDKTARECKEYSQTRFWRHGLFPNSRNQFKATTRLPDLCIFLGT 193 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + E A++ A ++ IP V Sbjct: 194 LDTVMS--------------------------------------EHKAVRHAAKMCIPSV 215 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +VDTN NP+L+ Y +PGNDDS +I L+C L A + G + M Sbjct: 216 GIVDTNCNPNLITYPVPGNDDSPCAIELYCSLFKEAIMRGKRARERLM 263 >gi|261316030|ref|ZP_05955227.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] gi|261305056|gb|EEY08553.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 127 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 82/117 (70%), Positives = 99/117 (84%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 MALP F++RQLLE+GV FGH+ WNPKM +I+ ERNN HI+DLSQTVP+L AL+V+S Sbjct: 11 MALPDFSMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVS 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 DTVARGGR+LFV TK QASD + +AA RSAQY VN++WLGGMMTNWKT+S SIQ+LR Sbjct: 71 DTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLR 127 >gi|328775193|gb|AEB39992.1| ribosomal protein S2 [Funaria hygrometrica] Length = 239 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 8/221 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I++LL + GHR + + Y++ RN II+L +T+ L++A +I + Sbjct: 5 LVIQKLLSTNAYLGHRIPTSD--FQGYLYGFRNEMAIINLEKTLICLRRACNLIESIIRA 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G L V T + + V + AKR+ Q +N KW+GG +TN K + + ++ Sbjct: 63 KGHFLLVNTDPEYNKIVQQMAKRTNQSYINHKWIGGFLTNRKHMKNVQKHFQNFSAHSKL 122 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ + + K+++ +GI +PD + +++ N+ +AI EA +L+IPIV Sbjct: 123 KDASTSSP--FDFFPHFRKMQKCFEGIMT-HDIPDCLVIINANKNSMAILEANQLQIPIV 179 Query: 186 AVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++VD+N + L+ Y IP NDDS + + LFC+L+ I Sbjct: 180 SLVDSNISNRLQKLITYPIPVNDDSIQFVYLFCNLITKTVI 220 >gi|301792270|ref|XP_002931102.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Ailuropoda melanoleuca] Length = 283 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 68 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAYR 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 128 GGIILFVSRSRQFSHLIETTARSCGEYAHTRYFKGGLLTNAPLLLGPMVRLPDLIIFLHT 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 188 LN--------------------------------------NVFEPHVAVRDAAKMHIPTV 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVDTN NP L+ Y +PGNDDS S+ LFC L +A ++ Sbjct: 210 GVVDTNCNPCLITYPVPGNDDSPPSVRLFCRLFQTAINRAKQKRRQ 255 >gi|281352038|gb|EFB27622.1| hypothetical protein PANDA_021849 [Ailuropoda melanoleuca] Length = 234 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 23 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAYR 82 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 83 GGIILFVSRSRQFSHLIETTARSCGEYAHTRYFKGGLLTNAPLLLGPMVRLPDLIIFLHT 142 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 143 LN--------------------------------------NVFEPHVAVRDAAKMHIPTV 164 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVDTN NP L+ Y +PGNDDS S+ LFC L +A ++ Sbjct: 165 GVVDTNCNPCLITYPVPGNDDSPPSVRLFCRLFQTAINRAKQKRRQ 210 >gi|83745430|gb|ABC42422.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI +RN HI +L +T L +A ++ D + G + L V TK + +D V Sbjct: 1 KWNPKMGLYISAKRNGIHITNLIKTARFLSEACNLVFDAASGGKQFLIVGTKQKTADSVA 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERLNIERKR 142 AA ++ +CVN KWLG +TNW T + + + RDL + K++ +R+ Sbjct: 61 CAAIKARCHCVNKKWLGPTLTNWSTTERRLHQFRDLRIEQKIGRFKRLPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|302418244|ref|XP_003006953.1| 37S ribosomal protein MRP4 [Verticillium albo-atrum VaMs.102] gi|261354555|gb|EEY16983.1| 37S ribosomal protein MRP4 [Verticillium albo-atrum VaMs.102] Length = 396 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 21/259 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ S GH WNP RYI+ R+N H+I L T L++A +V+ + Sbjct: 119 DITLELLMASQTHMGHHRSRWNPANSRYIYGVRDNVHVISLETTASHLRRAARVVEEVAF 178 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 GG +LFV T+ D V +AA R+ + +KW G +TN + LRD E L Sbjct: 179 HGGLVLFVGTRPGQMDIVTKAAGRAGGCHLYTKWTPGAITNRDFI------LRDREVVFL 232 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++ ++ + ++R R M +PDL+ ++ K + E IP Sbjct: 233 DEHDKPVPGFDGHVMDR------------RPM--VPDLVVCLNPMENKTLLNEGGLGTIP 278 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + ++DT+++P V Y IP NDDS RS +L ++ A +G R+ A S Sbjct: 279 TIGIIDTDADPTWVTYAIPANDDSLRSTSLIGGILGRAGQEGQKRRKEAAAAGQVSWDNP 338 Query: 244 VVHSKEGMQLEEDSQSSES 262 V + + E +++++ Sbjct: 339 VEVQRYMTKTREAYKAAKA 357 >gi|50423181|ref|XP_460171.1| DEHA2E19910p [Debaryomyces hansenii CBS767] gi|49655839|emb|CAG88444.1| DEHA2E19910p [Debaryomyces hansenii] Length = 468 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 24/233 (10%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 ++ + TI L+ +G GH +W P + YI+ E N H+IDL++T+ L +A QVI Sbjct: 220 SISETTISTLMAAGCHLGHAKAMWRPSTQPYIYGEYNGIHLIDLNETLSALNRATQVIKG 279 Query: 62 TVARGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 A+GG IL+V T + EAAKR+ Y V+ +W+ G +TN+ V++ I Sbjct: 280 VAAKGGVILYVGTTKNWEQHRALEEAAKRTRGYYVSKRWVPGTITNFTEVTKQI------ 333 Query: 120 EELLNKENQGFTKKERLNIERKRDKL---KRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 G ++ E +++ D+ + + + I+ PDL+ +++ + I E Sbjct: 334 --------GGSSRIEVDMMDQPTDRKLGEETSGNLIK-----PDLIVLLNPVENRNCINE 380 Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 + RIP + + DT+ P L+ Y IP NDDS R+ +L +++ +A +G+ + Sbjct: 381 CIKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLMTGILSKSAEEGLNER 433 >gi|16603942|gb|AAL27217.1| ribosomal protein subunit 2 [Pernettya prostrata] Length = 167 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R L + K + K+ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRKLRRMEQKMGRRTRLLKRNVARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFC 215 +E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 121 KEYTALRECIILGIPTVGLIDTNCDPDLVDFPIPANDDTRASIQFIL 167 >gi|255727016|ref|XP_002548434.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134358|gb|EER33913.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 475 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 131/264 (49%), Gaps = 22/264 (8%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI +L+ +G GH + M+ +I+ + HIIDL++T+ L A +VI V +G Sbjct: 231 TIAKLMAAGCHLGHATSSFRASMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIEGVVEKG 290 Query: 67 GRILFVATKSQA---SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G +L+V T + +++A++RS Y VN +W+ G +TN+ +++ +++ ++ Sbjct: 291 GIVLYVGTYKNNSSIHEALIKASERSHGYYVNKRWIPGTITNYTEITKQYSQVKTKVDID 350 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KE Q K I+ PDL+ +++ + I+E IP Sbjct: 351 MKEKQYEIKHAEKIIK-------------------PDLVVLLNPVENRNCIKECISACIP 391 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + + DT+ P L+ Y IP NDDS RS++L +++ +A G+ + + + K+A + Sbjct: 392 TIGLCDTDMEPSLLTYPIPCNDDSVRSVSLMLGILSKSAETGLNNRLAAIEKLEKNATKQ 451 Query: 244 VVHSKEGMQLEEDSQSSESSVLDG 267 + ++ + E+ + ES V + Sbjct: 452 IEEKQDKEEEEDVAGIEESPVKEE 475 >gi|194766019|ref|XP_001965122.1| GF21552 [Drosophila ananassae] gi|190617732|gb|EDV33256.1| GF21552 [Drosophila ananassae] Length = 265 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y+F R I DL +T L+ AL + R Sbjct: 58 FTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 117 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G I+F + + V + A+ + ++ W GG+ TN ++ +L DL LN Sbjct: 118 DGIIVFFNRNALNAHLVEQKAQEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 177 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 178 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 199 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDD+ ++ L+C+L A + G + +G Sbjct: 200 GIVDSNCNPNLITYPVPGNDDTPAAVELYCNLFKEAILRGKRERRQLLG 248 >gi|156353059|ref|XP_001622894.1| predicted protein [Nematostella vectensis] gi|156209527|gb|EDO30794.1| predicted protein [Nematostella vectensis] Length = 196 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 40/224 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R L +GV +GH WNP M+ Y++ R + HIIDL+QT+ + AL V+ TV R Sbjct: 13 VSLRDLFVAGVHYGHHEGCWNPLMKPYLYGTREHFHIIDLNQTIKHFRLALDVLCHTVYR 72 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG++LF++ K Q + A+ S +Y V +W GG TN V ++ Sbjct: 73 GGKVLFISCKPQFEELTQSLARDSGEYFVTQRWRGGTFTNSYMVLET------------- 119 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 R++ L + V R LA++E IP + Sbjct: 120 ---------------------------RNLPDLVVFLHVPSLGRNALAVKETAMCNIPSI 152 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +VD++ NP+L+ Y IPGNDD ++ ++C + SA + ++ Sbjct: 153 GIVDSDCNPNLIMYPIPGNDDMPSAVQMYCRIFKSAVLTAKEKR 196 >gi|38638298|ref|NP_943699.1| ribosomal protein S2 [Chara vulgaris] gi|32966612|gb|AAP92195.1| ribosomal protein S2 [Chara vulgaris] Length = 225 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 9/223 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL + FG+R + + Y++ RN IIDL +T+ L++A I Sbjct: 1 MFNSEKVIQRLLSTKAHFGNRTPTSD--FQPYLYGLRNEIAIIDLERTLLYLRRACNFIE 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + G ILFV T Q + + + AK + Q +N KW+GG +TNWK + + E Sbjct: 59 YIIRSNGHILFVNTNPQNNQIIQKMAKETCQSYINHKWIGGFLTNWKHIFHVQAHFQHFE 118 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L K + + + K+K+ +GI +PD + +++ N+ +AI EA +L Sbjct: 119 NLSLKALDTA---QHIRKVPRYKKMKKCFEGIVT-NDIPDCLVIMNANQNSMAILEASQL 174 Query: 181 RIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVAS 220 IPIV ++D++ L + Y IP NDDS I LFC L+ Sbjct: 175 HIPIVCLIDSDIPSKLQQRIHYPIPVNDDSLEFIYLFCHLITQ 217 >gi|16603938|gb|AAL27215.1| ribosomal protein subunit 2 [Gaultheria macrostigma] Length = 167 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + D + G + L V TK + +D V AA R+ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLFFDAASSGKQFLIVGTKERVADSVARAAIRARCHYVNKKWLGGLLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGF--TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + ++K R L + K + K+ ++RK L+ L GI+ M GLPD++ ++D + Sbjct: 61 RRLRKFRKLRRMEQKMGRRNRLLKRNAARLKRKLSHLQVYLGGIKYMTGLPDIVIIIDQH 120 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFC 215 +E A++E L IP V ++DTN +PDLVD+ IP NDD+ SI Sbjct: 121 KEYTALRECIILGIPTVGLIDTNCDPDLVDFPIPANDDTRASIQFIL 167 >gi|73967792|ref|XP_850391.1| PREDICTED: similar to mitochondrial ribosomal protein S2 [Canis familiaris] Length = 288 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L + V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 78 FSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTAVHLQLALNFTAHVAYR 137 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y + GG++TN + S+ +L DL L+ Sbjct: 138 KGIILFVSRNRQFSHLIETTAQDCGEYAHTRYFKGGLLTNSSLLLGSMVRLPDLIIFLHT 197 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 198 LN--------------------------------------NVFEPHVAVRDAAKMHIPTV 219 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS ++ LFC L + ++ Sbjct: 220 GIVDTNCNPCLITYPIPGNDDSPPAVHLFCRLFRTTINRAKQKRRQ 265 >gi|195118572|ref|XP_002003810.1| GI21009 [Drosophila mojavensis] gi|193914385|gb|EDW13252.1| GI21009 [Drosophila mojavensis] Length = 271 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M YI+ R I DL +T L+ AL + R Sbjct: 59 FTVRDLFNARVHYGHKEGSLDDRMRPYIYGSRLGHLIFDLDKTASHLRDALNFAAHIAFR 118 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 119 DGIILFFNRNAINAHLVEKKAMEAGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 178 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A++++ ++ IP + Sbjct: 179 QN--------------------------------------NVMAQHTAVRDSAKMAIPTI 200 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A G ++ +G Sbjct: 201 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRRELLG 249 >gi|7705805|ref|NP_057118.1| 28S ribosomal protein S2, mitochondrial [Homo sapiens] gi|24212389|sp|Q9Y399|RT02_HUMAN RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|4929651|gb|AAD34086.1|AF151849_1 CGI-91 protein [Homo sapiens] gi|14124982|gb|AAH08017.1| Mitochondrial ribosomal protein S2 [Homo sapiens] gi|15080676|dbj|BAB62529.1| mitochondrial ribosomal protein S2 [Homo sapiens] gi|15341861|gb|AAH13108.1| Mitochondrial ribosomal protein S2 [Homo sapiens] gi|55958122|emb|CAI14047.1| mitochondrial ribosomal protein S2 [Homo sapiens] Length = 296 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 79 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 139 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHT 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 199 LN--------------------------------------NIFEPHVAVRDAAKMNIPTV 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y +PGNDDS ++ L+C L +A ++ Sbjct: 221 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRQQ 266 >gi|320164687|gb|EFW41586.1| mitochondrial ribosomal protein subunit S2 [Capsaspora owczarzaki ATCC 30864] Length = 960 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 43/239 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 ++ T+RQL ++GV GH+ N YIF ER+ HIIDL QT+ L++A +V+ Sbjct: 752 LSEHSVTLRQLFDAGVHLGHKAGCHNVFANSYIFGERDGIHIIDLEQTIVALRRACRVLK 811 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + G ILFV +S+ V E A +Y + +KW+ G +TN + ++ Sbjct: 812 HIAYQNGVILFVGGRSKHKQLVRETAMSVGEYYIANKWMPGTLTNPMSTLGAL------- 864 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 PDL+ + +EA Sbjct: 865 ------------------------------------RQPDLIVLTCMPMSSQVAREANLA 888 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +P + + DT+ +P V Y IP NDDS RS+AL +++ A +G ++ + + + Sbjct: 889 NVPTIGIADTDCDPRQVTYSIPANDDSPRSMALLLNVMRMAIEEGKTKRQAGLPLEYGP 947 >gi|119608558|gb|EAW88152.1| mitochondrial ribosomal protein S2, isoform CRA_a [Homo sapiens] gi|119608559|gb|EAW88153.1| mitochondrial ribosomal protein S2, isoform CRA_a [Homo sapiens] Length = 319 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 102 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 161 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 162 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHT 221 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 222 LN--------------------------------------NIFEPHVAVRDAAKMNIPTV 243 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y +PGNDDS ++ L+C L +A ++ Sbjct: 244 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRQQ 289 >gi|16603903|gb|AAL27198.1| ribosomal protein subunit 2 [Monotropa hypopitys] gi|16603905|gb|AAL27199.1| ribosomal protein subunit 2 [Monotropa hypopitys] Length = 161 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 1/161 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG R L V TK + + V AA R+ + VN K LGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGNRFLIVGTKKRVASLVARAAIRARCHYVNKKRLGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + K RD E + K++ ++R+ L+ L GI+ M GLPD++ ++D ++ Sbjct: 61 KRLHKFRDLRMEQKMGRLERLPKRDAARLKRQLAHLQAYLGGIKYMTGLPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 E +A++E L IP + ++DTN +PDLVD IP NDD+ S Sbjct: 121 EYMALRECITLGIPTICLIDTNCDPDLVDLPIPANDDNRSS 161 >gi|83745436|gb|ABC42425.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI RN HI +L +T L +A ++ D +RG + L V TK + ++ Sbjct: 1 KWNPKMALYISANRNGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSAA 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL + K++ +R+ Sbjct: 61 CAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKRLPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|83745428|gb|ABC42421.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI RN HI +L +T L +A + D +RG + L V TK + ++ V Sbjct: 1 KWNPKMALYISANRNGIHITNLIKTARFLSEACNLGFDAASRGKQFLIVGTKKKTANSVA 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN-KENQGFTKKERLNIERKR 142 AA ++ +CVN KWLGG +TNW T + + + RDL + K++ +R+ Sbjct: 61 CAAIKARCHCVNKKWLGGTLTNWSTTERRLHQFRDLRIEQKIGRFKRLPKRDAAVSKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +L+ + GI+ M GLPD++ ++D + E A++E L IP + + Sbjct: 121 SRLQTYMGGIKYMTGLPDIVIIIDQHEEYTALRECITLGIPTICL 165 >gi|91208844|ref|YP_539005.1| ribosomal protein S2 [Physcomitrella patens] gi|90991384|dbj|BAE93076.1| ribosomal protein S2 [Physcomitrella patens] Length = 241 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 8/221 (3%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I++LL + GHR + + Y++ RN II+L +T+ L++A +I + Sbjct: 7 LVIQKLLSTNAYLGHRIPTSD--FQGYLYGFRNEMAIINLEKTLICLRRACNLIESIIRA 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G L V T + + V + AK++ Q +N KW+GG +TN K + + ++ Sbjct: 65 KGHFLLVNTDPEYNKIVQQMAKKTNQSYINHKWIGGFLTNRKHMKNVQKHFQNFSAHSKL 124 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ + + K+++ +GI +PD + +++ N+ +AI EA +L+IPIV Sbjct: 125 KDASTSSP--FDFFPHFRKMQKCFEGIMT-HDIPDCLVIINANKNSMAILEANQLQIPIV 181 Query: 186 AVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++VD+N + L+ Y IP NDDS + + LFC+L+ I Sbjct: 182 SLVDSNISNRLQKLITYPIPVNDDSIQFVYLFCNLITKTVI 222 >gi|126302695|ref|XP_001372572.1| PREDICTED: similar to mitochondrial ribosomal protein S2, [Monodelphis domestica] Length = 340 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 95/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME YIF R IIDL QTV LQ AL + R Sbjct: 127 FSLQTLFDARVHLGHKKGCRHRFMEPYIFGTRLEQDIIDLDQTVKHLQLALNFTAHVAYR 186 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + + A +Y + GG++TN +L DL + Sbjct: 187 KGIILFVSRNRQFTHLIEKLAVDCGEYAHVRYFKGGLLTNAPVQFGPGVRLPDLMIFFHT 246 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 247 LN--------------------------------------NVFETHVAVRDAAKMNIPTV 268 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS SI LFC L A++ Sbjct: 269 GIVDTNCNPCLISYPIPGNDDSPDSIKLFCQLFGMTIKRAKAKRKQ 314 >gi|16603901|gb|AAL27197.1| ribosomal protein subunit 2 [Pityopus californicus] Length = 161 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 1/161 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG L V TK + + V AA R+ + VN K LGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGNLFLIVGTKKRVASLVARAAIRARCHYVNKKRLGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + K RD E + K++ ++R+ L+ L GI+ M G PD++ ++D ++ Sbjct: 61 KRLNKFRDLRMEQKMGRLERLPKRDAARLKRQLAHLQAYLGGIKYMTGFPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 E A++E L IP + ++DTN +PDLVD IP NDD+ S Sbjct: 121 EYTALRECITLGIPTICLIDTNCDPDLVDLPIPANDDNRSS 161 >gi|16603910|gb|AAL27201.1| ribosomal protein subunit 2 [Monotropa hypopitys] gi|16603912|gb|AAL27202.1| ribosomal protein subunit 2 [Monotropa hypopitys] gi|16603914|gb|AAL27203.1| ribosomal protein subunit 2 [Monotropa hypopitys] Length = 161 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 94/161 (58%), Gaps = 1/161 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG + L V TK + +D V AA ++ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGNQFLIVGTKKEFADLVSRAAIKARCHYVNKKWLGGMLTNWSTTK 60 Query: 111 QSIQKLRDLEELLNKENQGFTKK-ERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + + KLRDL+ KK + ++R+ L+ L GI+ M LPD++ ++D ++ Sbjct: 61 KELHKLRDLKIKHKMGRLKQLKKRDVTGLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHK 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 E +++ E L IP + ++DTN +PD VD IP NDD+ S Sbjct: 121 EYISLLECITLGIPTICLIDTNCDPDPVDLPIPANDDTRSS 161 >gi|255524242|ref|ZP_05391201.1| ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296185363|ref|ZP_06853773.1| ribosomal protein S2 [Clostridium carboxidivorans P7] gi|255512067|gb|EET88348.1| ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296050197|gb|EFG89621.1| ribosomal protein S2 [Clostridium carboxidivorans P7] Length = 165 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 1/148 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A I Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFIRSV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI-QKLRDLEE 121 G +LFV TK QA + + E AKRS + VN++WLGGMMTN+ T+ I + + Sbjct: 61 SEEGKDVLFVGTKKQAQEAIQEEAKRSGMHFVNNRWLGGMMTNFTTIKTRIGKLEELEKM 120 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRAL 149 + + KKE + ++ ++ K++ L Sbjct: 121 EEDGTFEVLPKKEVIKLKNRKRKIREKL 148 >gi|326437226|gb|EGD82796.1| hypothetical protein PTSG_03446 [Salpingoeca sp. ATCC 50818] Length = 366 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 43/223 (19%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++ L+++ V GH + + NPKM+ +I+ +R+ ++DL +TVP+LQ+AL + + +R Sbjct: 53 FSMEDLVQARVHLGHTHGVNNPKMDDFIYEKRHGLTVLDLDKTVPLLQRALDITREIASR 112 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V A +Y V+ KW+GG +TN Sbjct: 113 GGVILFVSNRPQFETMVRRTATSCGEYFVSKKWVGGCLTN-------------------- 152 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 R L G++ LPDL+ + A++E R IP V Sbjct: 153 -------------------TYRVLGGMQ----LPDLVLFFSLPVNQAALKEVRDCMIPCV 189 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +VDT+ +P VDY +P NDDS S+ L DL A A +G A Sbjct: 190 GLVDTDCDPSSVDYPVPANDDSETSVNLMLDLFAGAVNEGKAE 232 >gi|66553073|ref|XP_395329.2| PREDICTED: 28S ribosomal protein S2, mitochondrial [Apis mellifera] Length = 259 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 38/228 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FTI+ L ++ V FGH+ N M +IF R IIDL ++ +L++AL + + Sbjct: 65 FTIKDLFDAKVHFGHKEGSLNDHMRPFIFGSRLGHLIIDLDKSAELLRQALNFTAHIAFK 124 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+A Q S V AK +Y KW G TN + +L DL LN Sbjct: 125 NGIILFIAKNPQISYLVENTAKECQEYAHTRKWNLGTFTNAVQEFGIVTRLPDLCIFLNT 184 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ A+ A ++ IP V Sbjct: 185 MES--------------------------------------VVKQHTAVVHAAKMCIPSV 206 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +VDTN +P L+ Y +PGNDD+ +I L+C L +A I G ++ + Sbjct: 207 GIVDTNCDPKLITYPVPGNDDTPCAIELYCKLFKNAIIKGKKYRNEML 254 >gi|289618930|emb|CBI54535.1| unnamed protein product [Sordaria macrospora] Length = 433 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + ++ L+ + GH LWNP RYI+ R HII L T L++A +V+ + Sbjct: 163 SEASLEDLMAAQAHMGHNTSLWNPANARYIYGVRQGIHIISLETTSIHLRRAARVVEEVA 222 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG ILFV T+ V+ AA+ + + +KW G +TN Sbjct: 223 YRGGLILFVGTRPGQRPIVVRAAEMAKACHLFTKWRPGTITN-----------------R 265 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + G ++R + L R + PDL+ ++ + E +IP Sbjct: 266 EQLLGGVPLTVVDELDRPLQGFEDHLHDRRPLA--PDLVVCLNPKENMTLLYECSLAKIP 323 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DTN+NP V Y IP NDDS R+ AL ++ A G R+ Sbjct: 324 TIGIIDTNTNPSWVTYQIPANDDSLRATALISGVLGRAGEHGQKRRLEAA 373 >gi|114627493|ref|XP_001170860.1| PREDICTED: similar to CGI-91 protein isoform 2 [Pan troglodytes] Length = 304 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 87 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 146 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 147 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFKGGMLTNARLLFGPTVRLPDLIIFLHT 206 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 207 LN--------------------------------------NIFEPHVAVRDAAKMNIPTV 228 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y +PGNDDS ++ L+C L +A ++ Sbjct: 229 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRRQ 274 >gi|307205969|gb|EFN84095.1| 28S ribosomal protein S2, mitochondrial [Harpegnathos saltator] Length = 255 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 46/232 (19%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L + V +GH+ L + ME +IF R IIDL QT +L++AL I+ R Sbjct: 60 FTVKDLYNARVHYGHKETLLHKNMETFIFGSRMGHLIIDLDQTAELLRQALNFIAHIAFR 119 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q + V + AK ++ W G+ N ++I +L Sbjct: 120 DGIILFISRNPQTTYLVDKTAKECKEFSHTRYWRKGIFPNSTNQFKTITRL--------- 170 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR----EKLAIQEARRLR 181 PDL ++T E + A ++ Sbjct: 171 ---------------------------------PDLCIFLNTLDTAMSEHTGVAHAAKMC 197 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 IP V +VDTN NP+L+ Y IPGNDDS +I L+C L A + G + M Sbjct: 198 IPSVGIVDTNCNPNLITYPIPGNDDSLCAIELYCSLFKEAILRGKKAREQLM 249 >gi|258576555|ref|XP_002542459.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237902725|gb|EEP77126.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 535 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 19/230 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + T+ LL S GH LWNP+ YIF R+ HII L T L++A +V+ + Sbjct: 296 SEITLELLLASQSHLGHATALWNPRNSSYIFGVRDGIHIISLEVTAAYLRRAARVVEEVA 355 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 R G ILFV T+ V+ AA+ + Y + +W+ G +TN + + L+ ++E Sbjct: 356 RRAGLILFVGTRPGQRGAVVRAAELAKGYHIFDRWIPGSITNGQRILDECA-LKVVDEFD 414 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N + + AL + PDL+ ++ + E IP Sbjct: 415 N----------------ELPEYTTALG--KHPVLRPDLVVCLNPLENTAMLSECAAYNIP 456 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + ++DT+++ V Y IP NDDS R +A+ + A G ++ Sbjct: 457 TIGIIDTDADVTTVTYPIPANDDSLRCVAVIAGALGRAGEAGQKKRMEDA 506 >gi|322697496|gb|EFY89275.1| 37S ribosomal protein MRP4 precursor [Metarhizium acridum CQMa 102] Length = 484 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 32/258 (12%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ L+ S GH LWNP RYI+ R HII L L++A +V+ + Sbjct: 147 DVSLELLMASQAHMGHNTSLWNPANSRYIYGVRQGIHIISLETIAAHLRRAARVVEEVSY 206 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV T+ + V +AA+ + + +KW G +TN + ++ Sbjct: 207 RGGVILFVGTRKGQMEIVTKAAELAGACHLFTKWTPGAITNRDVILKT------------ 254 Query: 125 KENQGFTKKERLNIERKRDKLKRALDG---IRDMGG--LPDLMFVVDTNREKLAIQEARR 179 + D L LDG + M LPDL+ ++ + E Sbjct: 255 ------------QPTKVVDHLDSELDGFDMYKGMARPLLPDLVVCLNPLENYTMLYECGL 302 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ---HSYMGAD 236 IP + V+DTN +P V Y IP NDDS R++A+ ++ A G R+ S Sbjct: 303 KNIPTIGVIDTNVDPSWVTYTIPANDDSLRAMAVVAGVLGRAGQKGKERRLQDSSRGNVS 362 Query: 237 TKSAGETVVHSKEGMQLE 254 K++ E H K+ +Q+ Sbjct: 363 WKTSPELERHVKKEVQVA 380 >gi|195051760|ref|XP_001993165.1| GH13663 [Drosophila grimshawi] gi|193900224|gb|EDV99090.1| GH13663 [Drosophila grimshawi] Length = 267 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+R L + V +GH+ + +M Y++ R I DL +T L++AL + R Sbjct: 55 FTVRDLFNARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTATHLRQALNFTAHIAFR 114 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + A + +Y W GG+ TN ++ +L DL LN Sbjct: 115 DGIILFFNRNALNALLVEQKAMEAGEYSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNT 174 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A+++A ++ IP + Sbjct: 175 QN--------------------------------------NVMAQHTAVRDAAKMAIPTI 196 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N NP+L+ Y +PGNDDS ++ L+C+L A G ++ +G Sbjct: 197 GIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRREVLG 245 >gi|150866063|ref|XP_001385536.2| hypothetical protein PICST_32903 [Scheffersomyces stipitis CBS 6054] gi|149387319|gb|ABN67507.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 421 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 19/222 (8%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L +I L+ +G GH W P + +I+ E + H+IDL++T L++A VI Sbjct: 182 LKDVSIATLMAAGCHLGHSKSNWRPTTQPFIYGEYDGIHLIDLNETAAALKRASNVIKGV 241 Query: 63 VARGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +GG IL+V T + + EAA RS Y V +W+ G +TN+ V++ IQ + +E Sbjct: 242 SKKGGIILYVGTSKNVFQNRALEEAAIRSNGYYVTKRWIPGTITNYTEVTKQIQGTQKIE 301 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + + G N+ ++ +L + PDL+ +++ + I E Sbjct: 302 VDMENKPTGR------NLGVEQGQLVK-----------PDLVVILNPVENRNCINECILS 344 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 R+P + + DT+ P L+ Y IP NDDS RS+ +++ +A Sbjct: 345 RVPTIGLCDTDMEPSLLTYPIPCNDDSVRSVTFMTGILSKSA 386 >gi|41058639|gb|AAR99306.1| ribosomal protein subunit B [Candidatus Blochmannia schaefferi] Length = 160 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 74/159 (46%), Positives = 103/159 (64%), Gaps = 1/159 (0%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP M+ +IF RN HIIDL +TV M +KAL ++ + G+ILFV TK AS+ V + Sbjct: 2 WNPXMKPFIFGVRNKIHIIDLEKTVVMFKKALIELNKIASLKGKILFVGTKRAASESVKK 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRD 143 A Q+ VN +WLGGM+TNWKTV QSI++L+DL+ + + + TKKE L + R+ Sbjct: 62 TAITCNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLDTQFKDGTVKKLTKKEALILNRELI 121 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L+ +L GI++MGGLPD +F V E +AI+EA I Sbjct: 122 NLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEANVXGI 160 >gi|296191147|ref|XP_002743530.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Callithrix jacchus] Length = 390 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 173 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDQDIIDLEQTATHLQLALNFTAHMAYR 232 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GG++TN + +L DL L+ Sbjct: 233 KGIILFISRNRQFSYLIENLARDCGEYAHTRYFTGGLLTNAPLLFGPGVRLPDLIIFLHT 292 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 293 LN--------------------------------------NVFEPHIAVRDAAKMNIPTV 314 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP LV Y +PGNDDS ++ L+C L + ++ Sbjct: 315 GIVDTNCNPCLVTYPVPGNDDSPPAVHLYCRLFRTTITRAKEKRRQ 360 >gi|114627491|ref|XP_001170748.1| PREDICTED: similar to CGI-91 protein isoform 1 [Pan troglodytes] Length = 254 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 37 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 96 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 97 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFKGGMLTNARLLFGPTVRLPDLIIFLHT 156 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 157 LN--------------------------------------NIFEPHVAVRDAAKMNIPTV 178 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y +PGNDDS ++ L+C L +A ++ Sbjct: 179 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRRQ 224 >gi|290462943|gb|ADD24519.1| 28S ribosomal protein S2, mitochondrial [Lepeophtheirus salmonis] Length = 232 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 37/228 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++ L + V GH +P M+ +I+ R + IIDL QT L++AL ++ R Sbjct: 39 FSVEDLFRARVHMGHVTGSIHPHMKPFIYGTRFGSTIIDLDQTALHLREALNFLAHIANR 98 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV + Q AA S +Y W + + + + +L D +++ Sbjct: 99 KGIILFVCRQPQFVHMTEVAALSSGEYAHCRTWSHKLFGDPRASYKCEVRLPDAVIMVHT 158 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N G++ E A+ +A + IP + Sbjct: 159 KN-----------------------GVKY--------------DEHGAVVDAAKAGIPTI 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +VD++ NP+++ Y IPGNDDS SI L+ DL A + G +++ + Sbjct: 182 GIVDSDCNPNIISYPIPGNDDSIPSIRLYLDLFQKAILLGKEKRNENL 229 >gi|311246761|ref|XP_003122327.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Sus scrofa] Length = 289 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 47/250 (18%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME Y+F R IIDL QT LQ AL + R Sbjct: 78 FSVRSLFDARVHLGHKAGCRHRFMEPYLFGSRLGQDIIDLEQTAAHLQLALNFTAHVAYR 137 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + A+ +Y + GG++TN + +L DL L+ Sbjct: 138 EGIILFVSRHRQFAHLIETTARDCGEYAHTRYFKGGLLTNAPLLLGPGVRLPDLIIFLHT 197 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 198 LN--------------------------------------NVFEPHVAVRDAAKMNIPTV 219 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA---------IDGIARQHSYMGAD 236 +VDTN NP L+ Y +PGNDDS ++ LFC L A ++ + R GA+ Sbjct: 220 GIVDTNCNPALITYPVPGNDDSPPAVRLFCRLFQVAISRAKEKRRQVEALYRLQGPAGAE 279 Query: 237 TKSAGETVVH 246 A Sbjct: 280 RGPAAPPPPE 289 >gi|332833303|ref|XP_520354.3| PREDICTED: 28S ribosomal protein S2, mitochondrial isoform 3 [Pan troglodytes] Length = 319 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 102 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATRLQLALNFTAHMAYR 161 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 162 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFKGGMLTNARLLFGPTVRLPDLIIFLHT 221 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 222 LN--------------------------------------NIFEPHVAVRDAAKMNIPTV 243 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y +PGNDDS ++ L+C L +A ++ Sbjct: 244 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRRQ 289 >gi|256561181|gb|ACU83670.1| ribosomal protein subunit 2 [Euphrasia stricta] gi|256561183|gb|ACU83671.1| ribosomal protein subunit 2 [Euphrasia subarctica] Length = 155 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 1/154 (0%) Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELL 123 RG + L V TK++A+D V+ AA ++ +CVN KWLGGM+TNW T + K RD E Sbjct: 2 RGKQFLIVGTKNKAADSVVWAAIKARCHCVNKKWLGGMLTNWSTTETRLHKFRDLRMEQK 61 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 K++ ++R+ L+ L GI+ M GLPD++ +VD + E A++E L IP Sbjct: 62 TGRLNRLPKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALRECITLGIP 121 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 + ++DTN +P+L D IP NDD+ SI L + Sbjct: 122 TICLIDTNCDPNLADISIPANDDAISSIRLILNK 155 >gi|257206626|emb|CAX82941.1| Mitochondrial 28S ribosomal protein S2 [Schistosoma japonicum] Length = 270 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 96/222 (43%), Gaps = 38/222 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ L ++ V GHR+ L N M+ YIF R IIDL QT +L AL + R Sbjct: 56 VSVTDLFQARVHLGHRSVLRNDYMKPYIFGCRQGIDIIDLDQTCSLLFDALNFTAHIAYR 115 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV Q V A+ +Y KW GG+ TN V +L DL LL+ Sbjct: 116 QGIILFVYQNKQMLPLVERTAENVGEYSYCRKWEGGVFTNSSDVFHDSVRLPDLVLLLST 175 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N +R A+++A ++ IP V Sbjct: 176 CNS--------------------------------------ISRPHSAVRDAAKMLIPTV 197 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTN++P L+ Y +PGNDDS ++ LFC L A A G Sbjct: 198 GVVDTNADPRLISYPVPGNDDSPTAVRLFCALFAEAIARGKR 239 >gi|322708061|gb|EFY99638.1| 37S ribosomal protein MRP4 [Metarhizium anisopliae ARSEF 23] Length = 484 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 29/235 (12%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ L+ S GH LWNP RYI+ R HII L L++A +V+ + Sbjct: 147 HVSLELLMASQAHMGHNTSLWNPANSRYIYGVRQGIHIISLETIAAHLRRAARVVEEVSY 206 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV T+ + V +AA+ + + +KW G +TN + ++ Sbjct: 207 RGGVILFVGTRKGQMEIVTKAAELAGACHLFTKWTPGAITNRDVILKT------------ 254 Query: 125 KENQGFTKKERLNIERKRDKLKRALDG---IRDMGG--LPDLMFVVDTNREKLAIQEARR 179 + D L LDG + M LPDL+ ++ + E Sbjct: 255 ------------QATKVVDHLDSELDGFDMYKGMARPLLPDLVVCLNPLENYTMLYECGL 302 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 IP + V+DTN +P V Y IP NDDS R++A+ ++ A G R+ Sbjct: 303 KNIPTIGVIDTNVDPSWVTYTIPANDDSLRAMAVVAGVLGRAGQKGKERRLQDSS 357 >gi|328768522|gb|EGF78568.1| hypothetical protein BATDEDRAFT_4793 [Batrachochytrium dendrobatidis JAM81] Length = 195 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 +++ LL + + GH LWNP M YI+ R+ THII+L T+ L++A I Sbjct: 4 HDISLKSLLAANLHLGHSTTLWNPSMLPYIYGTRHGTHIINLEHTLTHLRRAAAFIRQVA 63 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G I+F+ TK ++AA Y + W+GG +TN Sbjct: 64 MSNGNIVFLGTKPAIHKITVDAALLGNAYYITQ-WVGGTITN------------------ 104 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 KER + D + PD++ V+D A++EA IP Sbjct: 105 ---------KERTL------RHSTGFDPSKPHVHTPDVLVVLDYINNLWAVREANVAHIP 149 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 ++AV DTN++P LV Y IP NDDS I L ++++A+ DG + Sbjct: 150 VIAVCDTNTDPTLVQYPIPANDDSIAGIKLIAGVLSAASRDGATTR 195 >gi|332021375|gb|EGI61747.1| 28S ribosomal protein S2, mitochondrial [Acromyrmex echinatior] Length = 235 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 38/228 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ N ME +IF R IIDL QT +L++AL + R Sbjct: 40 FTVKDLYDARVHYGHKETSLNEHMETFIFGSRLGHLIIDLDQTAELLRQALNFTAHIAFR 99 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF++ Q V + AK ++ W G+ N + ++ +L DL L+ Sbjct: 100 GGIILFISRNPQVMHLVDKTAKECKEFSQTRFWRQGLFPNSRNQFKATTRLPDLCIFLST 159 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + E +A++ ++ IP V Sbjct: 160 LDT--------------------------------------VMAEHVAVRHTAKMCIPSV 181 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +VDTN NP+L+ Y +PGNDDS +I L+C L A + G + + Sbjct: 182 GIVDTNCNPNLITYPVPGNDDSLCAIQLYCSLFKEAIMRGKRAREQMI 229 >gi|256090197|ref|XP_002581095.1| 30S ribosomal protein S2 [Schistosoma mansoni] gi|238666909|emb|CAZ37334.1| 30S ribosomal protein S2 (prokaryotic and organellar), putative [Schistosoma mansoni] Length = 255 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 38/222 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 + L ++ V GHR+ L N M+ YI+ R IIDL QT ++ AL + R Sbjct: 56 VNVTDLFQARVHLGHRSVLRNEYMKPYIYGCRQGIDIIDLQQTCSLMFDALNFAAHIAYR 115 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ Q + + A+ +Y KW GG+ TN V +L DL L+ Sbjct: 116 QGIILFMHQNKQMLPLIEKTAENIGEYSHCRKWEGGVFTNSSDVFHDSVRLPDLILFLST 175 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N +R A+++A ++ IP + Sbjct: 176 CNS--------------------------------------ISRPHSAVRDAAKMLIPTI 197 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 VVDTNS+P L+ Y +PGNDDS ++ LFC L A A G Sbjct: 198 GVVDTNSDPRLISYPVPGNDDSPTAVRLFCALFAEAITRGKK 239 >gi|297269902|ref|XP_001097716.2| PREDICTED: 28S ribosomal protein S2, mitochondrial isoform 2 [Macaca mulatta] Length = 363 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 146 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGNRLDQDIIDLEQTAAHLQLALNFTAHVAYR 205 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GG++TN + +L DL L+ Sbjct: 206 KGIILFISRNRQFSYLIENTARHCGEYAHTRYFKGGLLTNAPLLFGPAVRLPDLIIFLHT 265 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F +A+++A ++ IP V Sbjct: 266 LNTIF--------------------------------------EPHVAVRDAAKMNIPTV 287 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS ++ L+C L + ++ Sbjct: 288 GIVDTNCNPCLITYPIPGNDDSPPAVHLYCRLFQTTITRAKEKRRQ 333 >gi|307174869|gb|EFN65147.1| 28S ribosomal protein S2, mitochondrial [Camponotus floridanus] Length = 197 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 46/229 (20%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT++ L ++ V +GH+ N ME +IF R + IIDL QT +L++AL I+ R Sbjct: 2 FTVKDLYDARVHYGHKITSMNQHMETFIFGSRLDHLIIDLDQTAELLRQALNFIAHVAFR 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q + V + AK ++ W G+ N K Sbjct: 62 DGIILFISRNPQTTYLVDKTAKECKEFSQTRYWRIGLFPNSKNQF--------------- 106 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR----EKLAIQEARRLR 181 + M LPDL + T E A++ + ++ Sbjct: 107 ---------------------------KTMTRLPDLCIFLSTLDSVLAEHPAVRHSAKMC 139 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 IP V +VDTN NP+L+ Y IPGNDDS +I L+C L A + G + Sbjct: 140 IPSVGIVDTNCNPNLITYPIPGNDDSLCAIELYCSLFKEAILRGKKARE 188 >gi|46123861|ref|XP_386484.1| hypothetical protein FG06308.1 [Gibberella zeae PH-1] Length = 645 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 20/264 (7%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH+ LWNP RYI+ R H+I L T L++A +V+ + Sbjct: 127 DITLELLLASQTHIGHKTSLWNPANSRYIYGVRQGVHMISLETTAAHLRRAARVVEEVAY 186 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 G ILFV + + V +AA+ + + +KW G +TN + + Sbjct: 187 NAGLILFVGNRKGQMEIVTQAAEMAGACHLFTKWTPGGITNRDVILKM------------ 234 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + K+ + + R + +PDL+ ++ + E IP Sbjct: 235 AGTKVVDHKDV-----ELPGFENYRGSARPL--MPDLVVCLNPLENYTLLYECGLKSIPT 287 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + V+DTN++P V Y IP NDDS R++A+ ++ A G R+ + D KS + Sbjct: 288 IGVIDTNADPSWVTYTIPANDDSLRAMAVVGGVLGRAGQRGYQRRMADAKKD-KSTWQNP 346 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQ 268 + M E+ +E + GQ Sbjct: 347 PDIVQHMSREKKVAIAERKNVMGQ 370 >gi|41058629|gb|AAR99301.1| ribosomal protein subunit B [Candidatus Blochmannia vafer] Length = 158 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 69/158 (43%), Positives = 97/158 (61%), Gaps = 1/158 (0%) Query: 22 NFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDC 81 WNP+M+ +IF +N HIIDL +T+ M KAL + G+ILFV TK A + Sbjct: 1 TRYWNPQMKPFIFGVQNKIHIIDLDKTILMFNKALVELKKITTLKGKILFVGTKRAARES 60 Query: 82 VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIER 140 + A Q+ VN +WLGGM+TNWKTV QSI++L++LE + Q TKKE L ++ Sbjct: 61 IKSTALICGQFFVNHRWLGGMLTNWKTVRQSIKRLKELENQSQDGTFQKLTKKEVLILKH 120 Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + L+ +L GI++MGGLPD +F V E +AI+EA Sbjct: 121 ELRGLENSLGGIKNMGGLPDAIFTVGAIHEHIAIKEAN 158 >gi|326477936|gb|EGE01946.1| 40S ribosomal protein S2 [Trichophyton equinum CBS 127.97] Length = 332 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 17/232 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP YI R HII L T L++A +++ + Sbjct: 100 SDVTLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVA 159 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + V +W+ G +TN + + +L+ Sbjct: 160 RVGGLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTNAMQLLNECE-----VKLV 214 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++ ++ +R L+ PDL+ + K +QE + IP Sbjct: 215 DALDRTVDYPGFQAVDIERCPLR------------PDLVVCFNPLENKPLLQECATMNIP 262 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + V+DT+++P V Y IP NDDS R I++ ++ A G + A Sbjct: 263 TIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERGQQVRLKQSAA 314 >gi|326473093|gb|EGD97102.1| 40S ribosomal protein S2 [Trichophyton tonsurans CBS 112818] Length = 332 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 17/232 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP YI R HII L T L++A +++ + Sbjct: 100 SDVTLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVA 159 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + V +W+ G +TN + + +L+ Sbjct: 160 RVGGLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTNAMQLLNECE-----VKLV 214 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++ ++ +R L+ PDL+ + K +QE + IP Sbjct: 215 DALDRTVDYPGFQAVDIERCPLR------------PDLVVCFNPLENKPLLQECATMNIP 262 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + V+DT+++P V Y IP NDDS R I++ ++ A G + A Sbjct: 263 TIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERGQQVRLKQSAA 314 >gi|41058643|gb|AAR99308.1| ribosomal protein subunit B [Candidatus Blochmannia ulcerosus] Length = 160 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 71/160 (44%), Positives = 99/160 (61%), Gaps = 1/160 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNP M+ +IF RN HIIDL +T+ M KAL + G+ILFV TK A + + Sbjct: 1 YWNPXMKPFIFGVRNKIHIIDLDKTIIMFNKALIELKKISELKGKILFVGTKRAARESIK 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKR 142 A Q+ VN +WLGGM+TNWKTV QSI++L++LE+ + TKKE L ++R+ Sbjct: 61 STALICGQFFVNYRWLGGMLTNWKTVRQSIKRLKNLEDQSKDGTFDKLTKKEVLVLKREL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + L+ +L GI++MG LPD +F V E +AI+EA L I Sbjct: 121 NSLENSLGGIKNMGSLPDAVFTVGAAHECIAIKEANSLGI 160 >gi|39944640|ref|XP_361857.1| hypothetical protein MGG_04331 [Magnaporthe oryzae 70-15] gi|145015070|gb|EDJ99638.1| hypothetical protein MGG_04331 [Magnaporthe oryzae 70-15] Length = 398 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 19/229 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ S GH LWNP R+I+ R + HII L QT L++A +++ + Sbjct: 136 DVTLELLMASQCHMGHHKSLWNPANARFIYGVRQDIHIISLEQTAAHLRRAARLVEEVAF 195 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG ILFV T+ + V AA+ S + +KW G +TN + Sbjct: 196 CGGLILFVGTRQGQMEIVTRAAELSRSCHLFNKWTPGTITN-----------------RD 238 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 + G + +R+ ++ L R + PDL+ V++ + + E + +IP Sbjct: 239 QLLAGGALRMVDEHDRELPGFEKHLQERRPIT--PDLVVVLNPLENNILLHECKVSQIPT 296 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + V+DTN++ V Y IP NDDS RS+A+ ++ A G R+ + Sbjct: 297 IGVIDTNADVTKVTYPIPANDDSLRSMAVIAGVLGRAGELGQKRRLADA 345 >gi|302665900|ref|XP_003024556.1| hypothetical protein TRV_01268 [Trichophyton verrucosum HKI 0517] gi|291188615|gb|EFE43945.1| hypothetical protein TRV_01268 [Trichophyton verrucosum HKI 0517] Length = 357 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 17/232 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP YI R HII L T L++A +++ + Sbjct: 125 SDVTLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVA 184 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + V +W+ G +TN + + +L+ Sbjct: 185 RVGGLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTNAMQLLGKCE-----VKLV 239 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++ +++ +R L+ PDL+ + K +QE + IP Sbjct: 240 DALDRTVDYPGFQSVDIERCPLR------------PDLVVCFNPLENKPLLQECATMNIP 287 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + V+DT+++P V Y IP NDDS R I++ ++ A G + Sbjct: 288 TIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERGQQVRLKQSAT 339 >gi|302501267|ref|XP_003012626.1| hypothetical protein ARB_01239 [Arthroderma benhamiae CBS 112371] gi|291176185|gb|EFE31986.1| hypothetical protein ARB_01239 [Arthroderma benhamiae CBS 112371] Length = 336 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 17/232 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP YI R HII L T L++A +++ + Sbjct: 104 SDVTLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVA 163 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + V +W+ G +TN + + +L+ Sbjct: 164 RVGGLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTNAMQLLGKCE-----VKLV 218 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++ +++ +R L+ PDL+ + K +QE + IP Sbjct: 219 DALDRTVDYPGFQSVDIERCPLR------------PDLVVCFNPLENKPLLQECATMNIP 266 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + V+DT+++P V Y IP NDDS R I++ ++ A G + Sbjct: 267 TIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERGQQVRLKQSAT 318 >gi|148235576|ref|NP_001089112.1| hypothetical protein LOC733351 [Xenopus laevis] gi|115292090|gb|AAI22476.1| LOC733351 protein [Xenopus laevis] Length = 282 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 81 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 140 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 141 KGIILFVSRNRQFTYLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLST 200 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F + +AI++A ++ IP + Sbjct: 201 LNNVF--------------------------------------EQHMAIRDAAKMNIPTM 222 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS ++ L+C L ++ Sbjct: 223 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKDKRKQ 268 >gi|147899103|ref|NP_001085303.1| mitochondrial ribosomal protein S2 [Xenopus laevis] gi|133737010|gb|AAI33759.1| LOC443704 protein [Xenopus laevis] Length = 280 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 79 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 139 KGVILFVSRNRQFTHLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSS 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + + LAI++A ++ IP + Sbjct: 199 LN--------------------------------------NVFEQHLAIRDAAKMNIPTM 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS ++ L+C L ++ Sbjct: 221 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKDKRKQ 266 >gi|49257614|gb|AAH74242.1| LOC443704 protein [Xenopus laevis] Length = 277 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 76 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 135 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 136 KGVILFVSRNRQFTHLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSS 195 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + + LAI++A ++ IP + Sbjct: 196 LN--------------------------------------NVFEQHLAIRDAAKMNIPTM 217 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS ++ L+C L ++ Sbjct: 218 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKDKRKQ 263 >gi|315929213|gb|EFV08434.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 305] Length = 142 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 1/138 (0%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R LLE GV FGH+ WNPKM+++IF ER ++IDL +T+ + ++ D A Sbjct: 2 VSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAE 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV TK QA + E A++ VN +WLGGMMTN+ T+ QSI+KL +E++ Sbjct: 62 GKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEED 121 Query: 126 EN-QGFTKKERLNIERKR 142 + + TKKE L + RK+ Sbjct: 122 GSIKLLTKKEALMLTRKK 139 >gi|83745509|gb|ABC42455.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI ER + HII+L++T L +A ++ D +RG ++L V T +D V Sbjct: 1 KWNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFDAASRGKQLLIVGTNKIRADLVE 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKR 142 +AA ++ + VN KW GG +TNW +QK R+ + E KK+ ++R+ Sbjct: 61 QAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRFNCLPKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 121 SRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|76780354|gb|AAI06456.1| LOC733351 protein [Xenopus laevis] Length = 278 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 77 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 136 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 137 KGIILFVSRNRQFTYMIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLST 196 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F + +AI++A ++ IP + Sbjct: 197 LNNVF--------------------------------------EQHMAIRDAAKMNIPTM 218 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS ++ L+C L ++ Sbjct: 219 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKDKRKQ 264 >gi|167950451|ref|ZP_02537525.1| SSU ribosomal protein S2P [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 135 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 2/131 (1%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +RQ+LE+GV FGH+ WNPKM YIF RN HI++L +T+P+ A+ I A GG Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMSPYIFGHRNKIHIVNLEKTLPLYNDAMNYIGSLSANGG 60 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILFV TK A D V E A+R VN +WLGGM+TN+KT+ QSI++L++LE + + Sbjct: 61 KILFVGTKRAARDAVREEAQRCGMPFVNHRWLGGMLTNFKTIKQSIKRLKELEAMFEDGS 120 Query: 128 --QGFTKKERL 136 Q F KKE L Sbjct: 121 VEQRFNKKEGL 131 >gi|62857737|ref|NP_001016765.1| mitochondrial ribosomal protein S2 [Xenopus (Silurana) tropicalis] gi|89267463|emb|CAJ83584.1| mitochondrial ribosomal protein S2 [Xenopus (Silurana) tropicalis] Length = 280 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L +S V GH+ + ME Y+F R IIDL QT+ LQ AL V + R Sbjct: 79 FSLRELYDSRVHLGHKKGCRHRLMEPYLFGCRLEQDIIDLDQTMRHLQLALNVTAHIAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q S + A+ +Y W GG++TN + +L DL L+ Sbjct: 139 KGVILFVSRNRQFSHLIESTARDCGEYAHTRYWQGGLLTNAPVQYGAGVRLPDLIVFLST 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N F + +AI++A ++ IP V Sbjct: 199 LNTVF--------------------------------------EQHVAIRDAAKMNIPTV 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVDTN NP L+ Y IPGNDDS+ ++ L+C L ++ Sbjct: 221 GVVDTNCNPGLITYPIPGNDDSAPAMELYCRLFKMTINRAKEKRKQ 266 >gi|149642651|ref|NP_001092347.1| 28S ribosomal protein S2, mitochondrial [Bos taurus] gi|189031800|sp|P82923|RT02_BOVIN RecName: Full=28S ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|148877364|gb|AAI46029.1| MRPS2 protein [Bos taurus] gi|296481952|gb|DAA24067.1| 28S ribosomal protein S2, mitochondrial [Bos taurus] Length = 293 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 67/229 (29%), Positives = 98/229 (42%), Gaps = 38/229 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L + V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 68 FSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAFR 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ Q S + A+ +Y + GG++TN + + +L DL L+ Sbjct: 128 GGIILFVSRARQFSHLIESTARSCGEYAHTRYFKGGLLTNAPLLLGARVRLPDLIIFLHT 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 188 LN--------------------------------------NVFEPHVAVRDAAKMSIPTV 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 VVDTN NP L+ Y +PGNDDS ++ LFC L +A ++ Sbjct: 210 GVVDTNCNPCLITYPVPGNDDSPPAVQLFCQLFQTAVTRAKEKRRQLEA 258 >gi|67677978|gb|AAH97661.1| Unknown (protein for IMAGE:6631538) [Xenopus laevis] Length = 274 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R+L ++ V GH+ + ME Y+F R IIDL QT+ LQ AL + + R Sbjct: 73 FSLRELFDARVHLGHKKGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYR 132 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV+ Q + + AK +Y W GG++TN +L DL L+ Sbjct: 133 KGVILFVSRNRQFTHLIESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGIRLPDLIIFLSS 192 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + + LAI++A ++ IP + Sbjct: 193 LN--------------------------------------NVFEQHLAIRDAAKMNIPTM 214 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y IPGNDDS ++ L+C L ++ Sbjct: 215 GIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKDKRKQ 260 >gi|302916339|ref|XP_003051980.1| hypothetical protein NECHADRAFT_103997 [Nectria haematococca mpVI 77-13-4] gi|256732919|gb|EEU46267.1| hypothetical protein NECHADRAFT_103997 [Nectria haematococca mpVI 77-13-4] Length = 538 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 19/229 (8%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ S GH LWNP RYI+ R HII L T L++A +V+ + Sbjct: 138 DITLELLMASQTHMGHSTSLWNPANSRYIYGVRQGIHIISLETTAAHLRRAARVVDEVAY 197 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RGG ILFV T+ + V +AA+ + + +KW G +TN + + Sbjct: 198 RGGLILFVGTRKGQMEIVTKAAEMAGACHLFTKWTPGAITNRDVILRM------------ 245 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 K +++ D ++ R + +PDL+ ++ + E IP Sbjct: 246 -----AGTKVVNEKDQELDGFEKYRGSARPL--MPDLVVCLNPLENYTLLYECGLKSIPT 298 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + V+DTN++P V Y IP NDDS R++A+ ++ A G R+ Sbjct: 299 IGVIDTNADPSWVTYTIPANDDSLRAMAVVGGVLGRAGQRGQQRRVEDA 347 >gi|327308428|ref|XP_003238905.1| 40S ribosomal protein S2 [Trichophyton rubrum CBS 118892] gi|326459161|gb|EGD84614.1| 40S ribosomal protein S2 [Trichophyton rubrum CBS 118892] Length = 326 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 17/232 (7%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP YI R HII L T L++A +++ + Sbjct: 100 SDVTLELLLASQAHIGHSTSLWNPGNSGYIHGIREGVHIISLDVTAAHLRRAAKIVEEVA 159 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV T+ V+ AA+ + V +W+ G +TN + + +L+ Sbjct: 160 RVGGLILFVGTRKGQKRAVVRAAELAQGCHVFDRWVPGSLTNAMQLLNKCE-----VKLV 214 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + ++ +++ +R L+ PDL+ + K +QE + IP Sbjct: 215 DALDRTVDYPGFQSVDIERCPLR------------PDLVVCFNPLENKPLLQECATMNIP 262 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + V+DT+++P V Y IP NDDS R I++ ++ A G + Sbjct: 263 TIGVIDTDADPTRVTYPIPANDDSPRCISVIAGVLGRAGERGQQVRLKQSAT 314 >gi|55958121|emb|CAI14046.1| mitochondrial ribosomal protein S2 [Homo sapiens] Length = 270 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 38/216 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 93 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYR 152 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GGM+TN + + +L DL L+ Sbjct: 153 KGIILFISRNRQFSYLIENMARDCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHT 212 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + +A+++A ++ IP V Sbjct: 213 LN--------------------------------------NIFEPHVAVRDAAKMNIPTV 234 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +VDTN NP L+ Y +PGNDDS ++ L+C L +A Sbjct: 235 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQTA 270 >gi|320590958|gb|EFX03399.1| 40S ribosomal protein [Grosmannia clavigera kw1407] Length = 390 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 31/261 (11%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ S GH LWNP RY+ R+ H+I L QT L++A +V+ + Sbjct: 132 DVTLELLMASQTHMGHHTSLWNPANARYVLGVRSGVHVIALEQTAAHLRRAARVVEEVAY 191 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV-SQSIQKLRDLEELL 123 R G ILFV T+ D V+ AA+ + + +KW G +TN + ++ ++ D ++ Sbjct: 192 RAGLILFVGTRRGQMDIVVRAAELADGCHLFTKWTAGTITNRDQILRKAALRIVDENDVE 251 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G L L + +PDL+ V++ + + E +P Sbjct: 252 TDGGDG---------------LVSDLRPL-----VPDLVVVLNPLENHVLLHECAMATVP 291 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD------- 236 + V+DT+++P V Y IP NDDS RS+ + ++ A G R+ Sbjct: 292 TIGVIDTDADPARVTYAIPANDDSLRSVGVIAGVLGRAGEMGKKRRLRDAADGVVAWTIP 351 Query: 237 ---TKSAGETVVHSKEGMQLE 254 K G E Q+ Sbjct: 352 PDLAKLMGRAPTEDDEDGQVA 372 >gi|157119238|ref|XP_001653316.1| 30S ribosomal protein S2 (prokaryotic and organellar) [Aedes aegypti] gi|108875414|gb|EAT39639.1| 30S ribosomal protein S2 (prokaryotic and organellar) [Aedes aegypti] Length = 239 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 38/228 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ + GH+ + M+ Y+F R IIDL +T L+ AL V + R Sbjct: 47 FTVEDLFKAKIHLGHKEGTLHNNMKGYLFGSRLGHCIIDLDKTAEYLRLALNVTAHVAYR 106 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF +Q V + A +Y W GG+ TN ++ +L DL LN Sbjct: 107 GGVILFFNRSAQNGHIVEKTAMECGEYSHTRFWRGGVFTNANVQFGAVTRLPDLCIFLNT 166 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N I +M A++++ ++ IP + Sbjct: 167 QNN-----------------------ILEM---------------HTAVKDSAKMSIPTI 188 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +VD+N NP+L+ Y +PGNDD+ +I L+C L SA + G A+ Sbjct: 189 GIVDSNCNPNLITYPVPGNDDTPSAIELYCKLFKSAVLLGKAKMKEDA 236 >gi|83745507|gb|ABC42454.1| ribosomal protein subunit 2 [Phelipanche ramosa] Length = 165 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI ER + HII+L++T L +A ++ +RG ++L V T +D V Sbjct: 1 KWNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQLLIVGTNKIRADLVE 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKR 142 +AA ++ + VN KW GG +TNW +QK R+ + E KK+ ++R+ Sbjct: 61 QAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRFNCLPKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 121 SRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|41058631|gb|AAR99302.1| ribosomal protein subunit B [Candidatus Blochmannia laevigatus] Length = 156 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 73/156 (46%), Positives = 99/156 (63%), Gaps = 1/156 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNP M+ +IF RN HIIDL T M ++AL ++ A G+ILFV TK AS+ V Sbjct: 1 YWNPXMKPFIFGVRNKIHIIDLETTSVMFKQALIELNKIAALKGKILFVGTKRAASESVK 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKR 142 + A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + R+ Sbjct: 61 KTALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFKKLTKKEALILNREL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L+ +L GI++MGGLPD +F V E +AI+EA Sbjct: 121 INLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEAN 156 >gi|242020264|ref|XP_002430575.1| mitochondrial 28S ribosomal protein S2, putative [Pediculus humanus corporis] gi|212515747|gb|EEB17837.1| mitochondrial 28S ribosomal protein S2, putative [Pediculus humanus corporis] Length = 229 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 38/224 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FTI+ L + V +GH+ N M++Y+F R I DL T LQKAL + + Sbjct: 2 FTIKDLFNARVHYGHKISSLNDNMKQYLFGSRLGHLIFDLDITSQHLQKALNFTAHVAYQ 61 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ + + V + A +Y V +W T V ++ +L DL LN Sbjct: 62 NGIILFISKNPRFTLVVEKTAVACQEYAVTREWNAFTFTGSYRVFENYIRLPDLCIFLNT 121 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + A+++A ++ IP + Sbjct: 122 LQENC--------------------------------------EQHPAVKDAAKMCIPTI 143 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 A+ DTN +P+L+ + +PGNDDS SI L+C L +A + G + Sbjct: 144 AITDTNCDPNLITFPVPGNDDSIESINLYCKLFKNAILAGKNAR 187 >gi|168705099|ref|ZP_02737376.1| 30S ribosomal protein S2 [Gemmata obscuriglobus UQM 2246] Length = 240 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 33/205 (16%) Query: 57 QVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 + +S V +GG ++FV TK QA + V A+R V+ +WLGG +TN++T+ +++L Sbjct: 1 RYLSQVVGKGGLVMFVGTKRQAKEIVEREAQRCGMPFVSERWLGGTLTNYRTIRNRLKRL 60 Query: 117 RDLEEL---------------------------------LNKENQGFTKKERLNIERKRD 143 ++LE + + +KK + R+ Sbjct: 61 QELEAMWLPQGENPNRVDLNSHIASMMTEAGKLDPALAPDTADILTHSKKMISTLSRELL 120 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 K++R L GIRDM PD + +V N+E +A++EA+R+ + +A++DT+S+PD VD IPG Sbjct: 121 KIRRNLMGIRDMIKPPDALVIVGPNKEHIAVKEAKRMGVTTIALIDTDSDPDPVDLPIPG 180 Query: 204 NDDSSRSIALFCDLVASAAIDGIAR 228 NDDS RSI + +A A ++G A Sbjct: 181 NDDSIRSIEVVLAKLADACLEGRAA 205 >gi|308233711|ref|ZP_07664448.1| SSU ribosomal protein S2P [Atopobium vaginae DSM 15829] Length = 175 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 116/184 (63%), Gaps = 10/184 (5%) Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE-NQGFTKKERLNIERKR 142 E AKR +N +WLGGM+TN+ T+ I ++ +LE ++ KKE+ + ++ Sbjct: 1 EQAKRCDMPYINQRWLGGMLTNFVTMRSRIDRMEELEAMVEDGRMAALPKKEQAVLGKEL 60 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIP 202 +KL+R L G+RDM LP +F+VD+ RE++AI+EA RL IP+VA++DTNS+PD+VDY IP Sbjct: 61 EKLQRNLGGVRDMHALPQALFIVDSKREEIAIREANRLHIPVVALLDTNSDPDVVDYGIP 120 Query: 203 GNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSES 262 NDD+ RS+ L C+LVA A + G ++ + E + + + +EDS S ++ Sbjct: 121 ANDDAIRSVNLMCELVADAVLAGKGKEQ--------ISEEEMKQGSQEEKAQEDS-SDKA 171 Query: 263 SVLD 266 SV + Sbjct: 172 SVSE 175 >gi|41058641|gb|AAR99307.1| ribosomal protein subunit B [Candidatus Blochmannia vicinus] Length = 156 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 69/155 (44%), Positives = 100/155 (64%), Gaps = 1/155 (0%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 WNP M+ +IF RN HII+L T+ M ++AL ++ + G+ILFV TK AS+ + + Sbjct: 2 WNPXMKPFIFGVRNKIHIINLETTILMFKQALVELNKIASLKGKILFVGTKRAASESIKK 61 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRD 143 A Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + R+ Sbjct: 62 TALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFKKVTKKEALILNRELI 121 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L+ +L GI++MGGLPD +F + E +AI+EA Sbjct: 122 NLENSLGGIKNMGGLPDAIFAIGATHEHIAIKEAN 156 >gi|19114947|ref|NP_594035.1| mitochondrial ribosomal protein subunit S2 [Schizosaccharomyces pombe 972h-] gi|74654579|sp|O13970|RT04_SCHPO RecName: Full=40S ribosomal protein mrp4, mitochondrial; Flags: Precursor gi|4038620|emb|CAB11267.1| mitochondrial ribosomal protein subunit S2 [Schizosaccharomyces pombe] Length = 263 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%) Query: 15 GVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 G GH +WNP + +I+ +R HII L QT+ L++A+ V+ G ILF+ T Sbjct: 57 GAHLGHSTSIWNPYTQPFIYGKREGIHIISLDQTMVYLRRAISVVRSIAKENGIILFIGT 116 Query: 75 KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKE 134 ++ D V+ AAKR+ Y + +WL G++TN + V + ++ K Q K Sbjct: 117 RNGQKDSVVAAAKRARGYHIFDRWLPGLLTNAREVQGKLGGSILCKDNRGKLIQTDKKPS 176 Query: 135 RLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP 194 + PDLM +++ K A EA++ +P + ++DT+++P Sbjct: 177 YV---------------------FPDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADP 215 Query: 195 DLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 +V Y IP NDDS R L L++ A + + D Sbjct: 216 RMVTYPIPANDDSLRCTDLIAGLLSRVAEQEYQKANQAFEKDK 258 >gi|156039607|ref|XP_001586911.1| hypothetical protein SS1G_11940 [Sclerotinia sclerotiorum 1980] gi|154697677|gb|EDN97415.1| hypothetical protein SS1G_11940 [Sclerotinia sclerotiorum 1980 UF-70] Length = 365 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 23/235 (9%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ S GH LWNP +RYI+ R HII L +T L++ +V+ Sbjct: 116 DITLELLMASQSHLGHATQLWNPANQRYIYGIRQGVHIISLEETAAHLRRCAKVVEGVAY 175 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV--SQSIQKLRDLEEL 122 GG ILFV T++ V++AA + + ++W+ G +TN + +I+ + +E+ Sbjct: 176 HGGLILFVGTRAGQDSAVVKAASLAKGCHLFNRWVAGSITNGDQILAKCAIKAIDANDEV 235 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + K + L PDL+ ++ + + E I Sbjct: 236 VAGFEDKVMKWKALK---------------------PDLVVCLNPLENYILLHECGLHNI 274 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 P + V+DT+++P V Y IP NDDS R I L ++ A +G ++ T Sbjct: 275 PTIGVIDTDADPTWVTYPIPANDDSLRCIQLIAGVLGRAGEEGQRKRLQAAKEGT 329 >gi|302690908|ref|XP_003035133.1| hypothetical protein SCHCODRAFT_81331 [Schizophyllum commune H4-8] gi|300108829|gb|EFJ00231.1| hypothetical protein SCHCODRAFT_81331 [Schizophyllum commune H4-8] Length = 430 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 42/276 (15%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + TI LL +G FGH NP Y + R IIDL T+P+L++A Q Sbjct: 78 EATISALLAAGAHFGHSTSRLNPNFMPYAYGTRGGITIIDLDHTLPLLRRATQFARSVAY 137 Query: 65 RGGRILFVATKSQASDCVMEAAKRSA---QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 RGG+ILF+ T+ V +AA+R Y + +WL G +TN + Sbjct: 138 RGGQILFLGTRPDLRPVVQKAAERLGPGNGYYIADRWLPGTLTN---------RF----S 184 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +LN ++ + LPDL+ +++ + +AI+E Sbjct: 185 MLNPDD------------------------FKRYNLLPDLVVLLNPIQNAVAIRELAVEH 220 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG--IARQHSYMGADTKS 239 +P + ++D+N++P LV Y IP ND+S+R + +++ AA +G + + + A + Sbjct: 221 VPTIGIIDSNADPRLVMYPIPANDESTRVAEIIAGVISIAAREGVHLREREAADVARKRL 280 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 A + +E + E+ + A+V E Sbjct: 281 ADDAGKSEEESDLSATQREELENLIRRVDSRAMVEE 316 >gi|83745517|gb|ABC42458.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6509] Length = 165 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI ER + HII+L++T L +A ++ +RG + L V T +D V Sbjct: 1 KWNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKIRADLVE 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKR 142 +AA ++ + VN KW GG +TNW +Q+ R+ + E KK+ ++R+ Sbjct: 61 QAAIKAQCHFVNKKWTGGTLTNWSITEARLQQFRNLIIEQKAGRLDCLPKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 121 SRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|123701323|ref|NP_001074162.1| 28S ribosomal protein S2, mitochondrial [Danio rerio] gi|120537789|gb|AAI29436.1| Zgc:158760 [Danio rerio] Length = 264 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME Y+F R + IIDL QTV LQ+AL + R Sbjct: 70 FSMKDLFDARVHLGHKKGCRHALMEPYLFGCRLDMDIIDLEQTVDHLQRALNFTAHVAFR 129 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG +LFV+ + Q + V A+ +Y W GG++TN +L DL L+ Sbjct: 130 GGVVLFVSRRRQFAHLVETTARDCGEYAHTRYWKGGLLTNAPIQYNPGVRLPDLIVFLST 189 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + RE + I++A ++ IP V Sbjct: 190 LN--------------------------------------NVFREHVGIRDAAKMNIPTV 211 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VD+N NP L+ Y +PGNDD+ ++ L+C L ++ Sbjct: 212 GIVDSNCNPSLISYPVPGNDDTPAAMELYCRLFKMTIKRAKDKRRQ 257 >gi|301500934|ref|YP_003795399.1| ribosomal protein S2 [Alveolata sp. CCMP3155] gi|300069480|gb|ADJ66587.1| ribosomal protein S2 [Chromerida sp. RM11] Length = 238 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 5/233 (2%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + ++ L+++ V GH W+P++ + + ++IDL QT +L A + Sbjct: 1 MSLVSLESLIKNKVYLGHSKSKWHPRIAFFTRAVVRSHYLIDLVQTAKLLSTAYTYLFKM 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RG + LFV TK+ AS AA + VN W G++TNW + ++ L + Sbjct: 61 AKRGHKFLFVGTKAVASPWTKRAAVCCGSFYVNQVWRSGLLTNWTFLRGRVRLLSWFNRV 120 Query: 123 L-----NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + K L++ER+ KL + G+ + +P+++ +VD EK AI E+ Sbjct: 121 FLWLQKRDSLKALPKGLVLSLERRYTKLSLEMSGLVGLHSVPNIIIIVDPEHEKQAILES 180 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +LR +V + D+ S+ + + +P NDDSS S+ ++++A + G ++ Sbjct: 181 IKLRRILVGITDSASHVNSIHMPVPANDDSSLSVKTVLQILSTAILRGKLVRY 233 >gi|149236425|ref|XP_001524090.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146452466|gb|EDK46722.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 492 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 24/261 (9%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + TI LL +G FG + P + +++ N H+IDL++T+ LQ A +VI Sbjct: 253 ISKTTISTLLAAGCHFGQSVASFRPSFQPFVYGTYNGVHVIDLNKTLEQLQLACKVIEGV 312 Query: 63 VARGGRILFVATKSQ--ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 +GG ILFV T + ++ AA RS Y V+ +W+ G +TN+ V++ I + Sbjct: 313 SEKGGSILFVGTHKNWSIRESLIAAANRSRGYYVSKRWIPGTITNYVEVTKQILDPFQKQ 372 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 ++ + T KE I + PDL+ +++ + I+E Sbjct: 373 QIDMADEVISTGKEHNLIIK------------------PDLVVLLNPVENRNCIKECLAA 414 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP + + D++ P L+ Y IP NDD RS+ L +++ AA G+ R+ K Sbjct: 415 CIPTIGLCDSDMEPSLLTYPIPCNDDGVRSVNLMLGVMSKAAETGLNRRLGV----VKQL 470 Query: 241 GETVVHSKEGMQLEEDSQSSE 261 + +E Q ++ E Sbjct: 471 RDEENRRREKQQNAIEAADEE 491 >gi|16603956|gb|AAL27224.1| ribosomal protein subunit 2 [Enkianthus chinensis] Length = 174 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 1/174 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V T+ +A+D V AA + + VN KWL G +TNW Sbjct: 1 FLSEACDLVFDAASRGKQFLIVGTRREAADSVEGAALTARCHYVNKKWLSGALTNWSITE 60 Query: 111 QSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + ++ LRDL+ E + F +R L+ L+G++ M GLPD++ +VD ++ Sbjct: 61 KRLRLLRDLKMEQKMDKLNRFPYASAAMFKRNFSHLEECLNGMKYMTGLPDIVIIVDQHQ 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + A++E L IP ++++DTN +PDL D++IP NDD+ SI + A Sbjct: 121 DSTALRECINLGIPTISLMDTNCDPDLGDFLIPANDDTRASIRFILSKLVFAIC 174 >gi|332261233|ref|XP_003279679.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Nomascus leucogenys] Length = 296 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L ++ V GH+ + ME YIF R + IIDL QT LQ AL + R Sbjct: 79 FSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHVAYR 138 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ Q S + A+ +Y + GG++TN + +L DL L+ Sbjct: 139 KGIILFISRNRQFSYLIENTARDCGEYAHTRYFKGGLLTNAPLLFGPTVRLPDLIIFLHT 198 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + +A+++A ++ IP V Sbjct: 199 --------------------------------------LSNIFEPHVAVRDAAKMNIPTV 220 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDTN NP L+ Y +PGNDDS ++ L+C L + ++ Sbjct: 221 GIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFRTVITRAKEKRRQ 266 >gi|171679828|ref|XP_001904860.1| hypothetical protein [Podospora anserina S mat+] gi|170939540|emb|CAP64767.1| unnamed protein product [Podospora anserina S mat+] Length = 369 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 41/230 (17%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 ++ LL + GH WNP RYI+ ER++ HII L QT L++A +V+ + Sbjct: 114 HDASLEDLLAAQCHMGHHVSRWNPANSRYIYGERSDIHIISLEQTAAHLRRAARVVEEVA 173 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 GG ILFV + V A+ + + KW G+ ++ + LRD + Sbjct: 174 YHGGLILFVGNRKGQMPIVTRMAELAGACHLFQKWTPGVYEGFE------EHLRDCRPVT 227 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 G+R D ++E +P Sbjct: 228 PD-----------------------FGGLR------------DPLENYALLRECALATVP 252 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 V V+DT+++P V Y IP NDDS RS+AL ++ A G R+ + Sbjct: 253 TVGVIDTDADPSWVTYQIPANDDSLRSVALIAGVLGRAGERGQQRRLADA 302 >gi|16603954|gb|AAL27223.1| ribosomal protein subunit 2 [Enkianthus chinensis] Length = 173 Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 1/173 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D +RG + L V T+ +A+D V AA + + VN KWL G +TNW Sbjct: 1 FLSEACDLVFDAASRGKQFLIVGTRREAADSVEGAALTARCHYVNKKWLSGALTNWSITE 60 Query: 111 QSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + ++ LRDL+ E + F +R L+ L+G++ M GLPD++ +VD ++ Sbjct: 61 KRLRLLRDLKMEQKMDKLNRFPYASAAMFKRNFSHLEECLNGMKYMTGLPDIVIIVDQHQ 120 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 + A++E L IP ++++DTN +PDL D++IP NDD+ SI + A Sbjct: 121 DSTALRECINLGIPTISLMDTNCDPDLGDFLIPANDDTRASIRFILSKLVFAI 173 >gi|289741867|gb|ADD19681.1| mitochondrial ribosomal protein S2 [Glossina morsitans morsitans] Length = 265 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 38/228 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F++R L + V +GH+ + +M +I+ R I DL +T L+ AL + + R Sbjct: 68 FSVRDLFNARVHYGHKEGSLDDRMRPFIYGSRLGHLIFDLDKTASHLRDALNITAHIAFR 127 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G I F + + V + A + ++ W GG+ TN ++ +L DL LN Sbjct: 128 DGIICFFNRNALNAHIVEKKAMEAGEFSYTKFWRGGIFTNANVQFGAVTRLPDLCIFLNT 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 +N + + A++++ ++ IP + Sbjct: 188 QN--------------------------------------NILAQHTAVRDSAKMAIPTI 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +VD+N NP+L+ Y +PGNDD+ +I L+C+L +A + G ++ ++ Sbjct: 210 GIVDSNCNPNLITYPVPGNDDTPCAIELYCNLFKAAILRGKQKRREFL 257 >gi|47228392|emb|CAG05212.1| unnamed protein product [Tetraodon nigroviridis] Length = 262 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L ++ V GH+ + ME Y++ R IIDL QT+ LQ AL + R Sbjct: 67 FSLKDLFDARVHLGHKRGCRHRLMEPYLYGCRLEQDIIDLDQTMEHLQLALNFTAHVAYR 126 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV+ + Q V AK +Y W GG++TN +L DL L+ Sbjct: 127 GGVILFVSRRRQFGHLVECTAKECGEYAHTRYWQGGLLTNANIQYGPGVRLPDLIIFLST 186 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N + ++ + I++A ++ IP V Sbjct: 187 LN--------------------------------------NVFQQHVGIRDAAKMNIPTV 208 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVD+N NP L+ Y +PGNDD+ ++ +C L ++ Sbjct: 209 GVVDSNCNPSLLTYPVPGNDDTPAAVEFYCRLFKMTITRAKDKRRQ 254 >gi|83745317|gb|ABC42370.1| ribosomal protein subunit 2 [Orobanche minor] Length = 155 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 1/154 (0%) Query: 27 PKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAA 86 PKM YI R HI +L +T L +A ++ D +RG + L V TK + ++ V AA Sbjct: 2 PKMAPYISANRKGIHITNLIKTARFLSEACNLVFDAASRGKQFLIVGTKKKTANSVACAA 61 Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKL 145 K++ +CVN KWLGG +TNW T + + RDL E + K++ +R+ +L Sbjct: 62 KKARCHCVNKKWLGGTLTNWSTTESRLHQFRDLRIEQKMGRFKRLPKRDAAVSKRQLSRL 121 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + GI+ M GLPD++ +VD + E A++E Sbjct: 122 QTYMGGIKYMTGLPDIVIIVDQHEEYTALRECIT 155 >gi|83745504|gb|ABC42453.1| ribosomal protein subunit 2 [Phelipanche nana] gi|83745513|gb|ABC42456.1| ribosomal protein subunit 2 [Phelipanche nana] Length = 165 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 93/165 (56%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI ER + HII+L++T L +A ++ V+RG + L V T +D V Sbjct: 1 KWNPKMALYISAERKHRHIINLTKTARFLYEACNLVFYAVSRGKQFLIVGTNKIRADLVE 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKR 142 +AA ++ + VN KW GG +TNW +QK R+ + E + KK+ ++R+ Sbjct: 61 QAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEEKAGRLECLPKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ L GI+ M GLPD++ ++D N E A+QE L IP + + Sbjct: 121 SRFQKNLGGIKYMRGLPDIVIILDQNEEYKALQECINLGIPTICL 165 >gi|145629993|ref|ZP_01785775.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021] gi|145632290|ref|ZP_01788025.1| preprotein translocase subunit SecA [Haemophilus influenzae 3655] gi|145641898|ref|ZP_01797472.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|144984274|gb|EDJ91697.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021] gi|144987197|gb|EDJ93727.1| preprotein translocase subunit SecA [Haemophilus influenzae 3655] gi|145273377|gb|EDK13249.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.4-21] Length = 134 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV QSI++L+DLE Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120 Query: 123 -LNKENQGFTKKER 135 + TKK+R Sbjct: 121 SQDGTFDKLTKKKR 134 >gi|115628630|ref|XP_787912.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115972808|ref|XP_001184550.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 253 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT +L ES V GH+ L + +M++Y+ R I+DL QT P+L AL ++ R Sbjct: 60 FTRTELFESRVHLGHKEGLLDQRMKKYMIGTRREQCIMDLDQTTPLLNSALNFTANIAYR 119 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV Q + V E A+ +Y W G TN + +L DL LN Sbjct: 120 NGIILFVNRVPQFAHAVEEMARACGEYAHTRHWQKGCFTNAQIQMGPGTRLPDLIIFLNT 179 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N D + A+ +A ++ IP + Sbjct: 180 LN--------------------------------------DVFSQHQAVIDAAKMNIPTI 201 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 AVVD+N NP+L+ Y IPGNDD+ ++ LF L + + G ++ Sbjct: 202 AVVDSNCNPNLITYPIPGNDDTPVAVELFMRLFKESVLLGKQKRKE 247 >gi|169854163|ref|XP_001833758.1| mitochondrial ribosomal protein subunit S2 [Coprinopsis cinerea okayama7#130] gi|116505155|gb|EAU88050.1| mitochondrial ribosomal protein subunit S2 [Coprinopsis cinerea okayama7#130] Length = 308 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 40/241 (16%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 TI LL +G FGH + NP Y + R IIDL T+P+L++A V G Sbjct: 97 TISALLAAGAHFGHASSRMNPNFMPYAYGTRAGITIIDLDSTLPLLRRAANVTRAVARAG 156 Query: 67 GRILFVATKSQASDCVMEAAKRSA---QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G+ILF+ T+ V +AA+R Y V +WL G +TN + + Q Sbjct: 157 GQILFIGTRPDLKPIVQKAAERVGPEQGYYVGDRWLPGTLTNRREFFRPEQ--------- 207 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + +PDL +++ + AI+E +P Sbjct: 208 ----------------------------LANTNVIPDLAIILNPVQNANAIREFAVENVP 239 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 + ++D+N +P LV Y IP ND+++R+ L +++ AA +G+ + A K + Sbjct: 240 TIGIIDSNVDPRLVMYPIPANDENTRAAELIGGVLSIAAREGVELREQEDMARLKQQQKK 299 Query: 244 V 244 Sbjct: 300 F 300 >gi|83745519|gb|ABC42459.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6509] Length = 165 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI ER + HII+L++T L +A ++ +RG + L V T +D V Sbjct: 1 KWNPKMAPYISTERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKIRADLVE 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKR 142 +AA ++ + VN KW GG +TNW +QK R+ + E KK+ ++R+ Sbjct: 61 QAAIKAQCHFVNKKWTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLPKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ GI+ M GLPD++ ++ N E A+QE L IP + + Sbjct: 121 SRFQKNRGGIKYMRGLPDIIIILVQNEEYKALQECINLGIPTICL 165 >gi|50555890|ref|XP_505353.1| YALI0F12991p [Yarrowia lipolytica] gi|49651223|emb|CAG78160.1| YALI0F12991p [Yarrowia lipolytica] Length = 427 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 14/266 (5%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL +G GH L + + +I+ R+ IIDL QTV L++A ++ Sbjct: 172 EATVTSLLAAGAHLGHAVELGHVNNQPFIYGVRDGISIIDLEQTVTQLRRAARITEAVAK 231 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + G ILFV T+ + ++R V+SKW+ G +TN+ ++ + ++ E+++ Sbjct: 232 QNGLILFVGTRDGQKLALEAMSRRCGASYVHSKWIPGAITNFSNIAANWKRY----EVVD 287 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 E+ + R+ D I PDL+ +++ + I+E + IP Sbjct: 288 GESGTSFADINQHTGREFDAE------ISGPNMRPDLVIILNPDENPALIRECLKSCIPT 341 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG----IARQHSYMGADTKSA 240 V V DTN NP + Y I NDDS R+ L ++A AA G + A+ Sbjct: 342 VGVADTNFNPSKLSYPIAANDDSLRTTDLITGVLARAAEKGHKLRRFEEQQRRNAELLHM 401 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLD 266 + +V + + + ED SS + + Sbjct: 402 KKNLVQAADENDVTEDPFSSGEAHKE 427 >gi|74179400|dbj|BAE44057.1| ribosomal protein S2 [Symplocarpus nipponicus] Length = 150 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFNAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKR 147 + K++ ++R+ LK Sbjct: 127 MGKINRLPKRDAAMLKRQLSTLKT 150 >gi|74179397|dbj|BAE44055.1| ribosomal protein S2 [Symplocarpus foetidus] gi|74179403|dbj|BAE44059.1| ribosomal protein S2 [Symplocarpus nabekuraensis] Length = 150 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + + Sbjct: 7 NIDLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFNAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKR 147 + K++ ++R+ LK Sbjct: 127 MGKINRLPKRDAAMLKRQLSTLKT 150 >gi|41058649|gb|AAR99311.1| ribosomal protein subunit B [Candidatus Blochmannia castaneus] Length = 150 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 1/149 (0%) Query: 23 FLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCV 82 WNP M+ +IF RN HIIDL T+ M ++AL ++ + G+ILFV TK AS+ V Sbjct: 1 RYWNPXMKPFIFGVRNKIHIIDLETTILMFKQALIELNKIASLKGKILFVGTKRAASEAV 60 Query: 83 MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERK 141 + A Q+ VN++WLGGM+TNWKTV QSI++L+DLE + Q TKKE L + R+ Sbjct: 61 KKTALACNQFFVNNRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFQKLTKKEALILNRE 120 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 L+ +L GI++MGGLPD +F V E Sbjct: 121 LINLENSLGGIKNMGGLPDAIFAVGATHE 149 >gi|74179394|dbj|BAE44053.1| ribosomal protein S2 [Lysichiton camtschatcensis] Length = 150 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M YI +R HI +L++T L +A ++ + + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFNAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQK 126 Query: 124 NKENQGFTKKERLNIERKRDKLKR 147 + K++ ++R+ LK Sbjct: 127 MGKINRLQKRDAAMLKRQLSTLKT 150 >gi|328850536|gb|EGF99699.1| hypothetical protein MELLADRAFT_40132 [Melampsora larici-populina 98AG31] Length = 240 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 18/239 (7%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T+ L+ + GH L +P I+ R+N IIDL QT+ L +A VI +T Sbjct: 11 ITNLTLSTLISASSHLGHNKSLSSPISYPLIYGTRSNISIIDLRQTLSYLHRACNVIRET 70 Query: 63 VARGGRILFVATKSQASDCVMEAAKR--SAQYCVNSK-------WLGGMMTNWKTVSQSI 113 V + G +LF D + A++R S Y + + W+ G +TN V + Sbjct: 71 VEKDGIVLFGTGIDGTQDSIKLASQRLGSNGYSLGHRPNHQNGIWIRGTITNSIEVLKKP 130 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 +++ +L NQ + K + LD + + LP L+ + ++ K+ Sbjct: 131 KQVTKQTKLNQILNQSQPNSK---------KNQSPLDNLESLKFLPSLIVIFSPHQSKVL 181 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 ++EA +IP + ++D++ +P LV Y IP NDDS RSI L +++ A +G+ R+ Sbjct: 182 LREASLKQIPTIGIIDSDLDPRLVTYPIPANDDSIRSIELIAGVLSKAGQEGLKRRQER 240 >gi|16603896|gb|AAL27196.1| ribosomal protein subunit 2 [Pleuricospora fimbriolata] Length = 159 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 1/160 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG ++L V TK+ +D V AA+R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGDQLLIVGTKNIVADFVARAARRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 + ++K RDL L K +R+ L+ GI+ M GLPD++ ++D ++E Sbjct: 61 KRLRKFRDLRMELKMGRLNRIPKN-TRFKRQLAHLQAYFGGIQYMRGLPDIVIILDQHKE 119 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 +A++E L IP + ++DTNS+PDLVD IP NDD+ S Sbjct: 120 YMALRECVTLGIPTICLIDTNSDPDLVDLPIPANDDNRFS 159 >gi|72009567|ref|XP_780586.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974978|ref|XP_001186467.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 267 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT +L ES V GH+ L + +M++Y+ R I+DL QT P+L AL ++ R Sbjct: 74 FTRTELFESRVHLGHKEGLLDQRMKKYMIGTRREQCIMDLDQTTPLLNSALNXTANIAYR 133 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV Q + V E A+ +Y W G TN + +L DL LN Sbjct: 134 NGIILFVNRVPQFAHAVEEMARACGEYAHTRHWQKGCFTNAQIQMGPGTRLPDLIIFLNT 193 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 N D + A+ +A ++ IP + Sbjct: 194 LN--------------------------------------DVFSQHQAVVDAAKMNIPTI 215 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 AVVD+N NP+L+ Y IPGNDD+ ++ LF L + + G ++ Sbjct: 216 AVVDSNCNPNLITYPIPGNDDTPVAVELFMRLFKESVLLGKQKRKE 261 >gi|83745369|gb|ABC42396.1| ribosomal protein subunit 2 [Phelipanche arenaria] Length = 159 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 1/159 (0%) Query: 27 PKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAA 86 PKM YI ER + HII+L++T L +A ++ +RG + L V TK + V +AA Sbjct: 1 PKMAPYISAERKHMHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTKRSTVNLVEQAA 60 Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKL 145 K++ + VN KW GGM+TNW +QK +D + E KK+ ++R+ Sbjct: 61 KKAGCHFVNKKWTGGMLTNWSITKARLQKFKDLIIEQEAGRIDCLPKKDAAVVKRQLSHF 120 Query: 146 KRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++ GIR+M LPD++ ++ N E A+QE L IP Sbjct: 121 QKNFGGIRNMSELPDIVIILCQNEEYKALQECITLGIPT 159 >gi|262317677|dbj|BAI48206.1| 30S ribosomal protein S2 [Typhonium blumei] Length = 145 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG +L V TK++A+D V AA R+ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHLLIVGTKNKAADSVASAAIRARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|159502715|gb|ABW97534.1| ribosomal protein subunit 2 [Striga gesnerioides] Length = 140 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 1/140 (0%) Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKEN 127 L V T+ + +D V AA ++ + VN KWLGGM+TNW T + KLRDL E Sbjct: 1 FLIVGTQKKEADSVAWAAIKARCHFVNKKWLGGMLTNWSTTETRLHKLRDLRIEQRAGRL 60 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 K++ ++R+ +L+ L GI+ M LPD++ ++D +E A++E L IP + + Sbjct: 61 SRLPKRDAAVVKRQLSRLQTYLGGIKYMTRLPDVVIILDQRKEYTALRECITLGIPTICL 120 Query: 188 VDTNSNPDLVDYVIPGNDDS 207 +DTN +PDL D+ IP NDDS Sbjct: 121 IDTNCDPDLADFSIPANDDS 140 >gi|262317722|dbj|BAI48236.1| 30S ribosomal protein S2 [Typhonium giganteum] gi|262317725|dbj|BAI48238.1| 30S ribosomal protein S2 [Typhonium venosum] gi|262317731|dbj|BAI48242.1| 30S ribosomal protein S2 [Theriophonum sp. 'Yadav_Kerala'] gi|262317734|dbj|BAI48244.1| 30S ribosomal protein S2 [Arum cyrenaicum] gi|262317737|dbj|BAI48246.1| 30S ribosomal protein S2 [Arum hygrophilum] gi|262317740|dbj|BAI48248.1| 30S ribosomal protein S2 [Arum purpureospathum] gi|262317749|dbj|BAI48254.1| 30S ribosomal protein S2 [Helicodiceros muscivorus] Length = 145 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|262317728|dbj|BAI48240.1| 30S ribosomal protein S2 [Theriophonum dalzellii] Length = 145 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T ++K RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLKKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|324519945|gb|ADY47523.1| 28S ribosomal protein S2 [Ascaris suum] Length = 254 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 91/230 (39%), Gaps = 38/230 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I + + V +GH+ N KM+ ++ ER I DL T L KAL IS R Sbjct: 62 VRIEDMFHARVHYGHKIGTLNEKMKWSLYGERLGICIFDLDITRKYLIKALNFISHVAYR 121 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILFV++ + A +Y KW G +TN + + + +L D L+ Sbjct: 122 GGVILFVSSDRNNMLMIERMASLVGEYSHVRKWQEGTLTNSRQLFGAPIRLPDTIIFLST 181 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + A+ EA ++ IP V Sbjct: 182 --------------------------------------LTSVLETHPAVIEAAKMAIPSV 203 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 VVD+NS+P + Y IPGNDDS+ S+ F +L A G + + A Sbjct: 204 GVVDSNSDPSYISYAIPGNDDSTPSVEYFMNLFVRAIETGKRARAASQRA 253 >gi|262317698|dbj|BAI48220.1| 30S ribosomal protein S2 [Typhonium diversifolium] gi|262317701|dbj|BAI48222.1| 30S ribosomal protein S2 [Typhonium diversifolium] Length = 145 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T+ +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTMETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|262317683|dbj|BAI48210.1| 30S ribosomal protein S2 [Typhonium flagelliforme] gi|262317752|dbj|BAI48256.1| 30S ribosomal protein S2 [Arisaema serratum] gi|262317755|dbj|BAI48258.1| 30S ribosomal protein S2 [Pinellia pedatisecta] gi|262317761|dbj|BAI48262.1| 30S ribosomal protein S2 [Alocasia cucullata] gi|262317764|dbj|BAI48264.1| 30S ribosomal protein S2 [Alocasia odora] Length = 145 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|262317704|dbj|BAI48224.1| 30S ribosomal protein S2 [Typhonium calcicola] gi|262317707|dbj|BAI48226.1| 30S ribosomal protein S2 [Typhonium horsfieldii] gi|262317710|dbj|BAI48228.1| 30S ribosomal protein S2 [Typhonium kungmingense] gi|262317713|dbj|BAI48230.1| 30S ribosomal protein S2 [Typhonium larsenii] gi|262317716|dbj|BAI48232.1| 30S ribosomal protein S2 [Typhonium omeiense] Length = 145 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|262317758|dbj|BAI48260.1| 30S ribosomal protein S2 [Pinellia tripartita] Length = 145 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ + ++R+ Sbjct: 127 MGKLNRLPKRDAVMLKRQL 145 >gi|262317767|dbj|BAI48266.1| 30S ribosomal protein S2 [Colocasia esculenta] gi|262317770|dbj|BAI48268.1| 30S ribosomal protein S2 [Remusatia vivipara] Length = 145 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|41058657|gb|AAR99315.1| ribosomal protein subunit B [Candidatus Blochmannia floridanus] Length = 151 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 1/151 (0%) Query: 31 RYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSA 90 +IF RN HII+L +T+ M AL + G+ILFV TK + + A Sbjct: 1 PFIFGIRNKIHIINLDKTIVMFSNALVELKKIALAKGKILFVGTKRATRESIKSTALICG 60 Query: 91 QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRAL 149 Q+ VN +WLGGM+TNWKTV QSI++L+DLE + TKKE L + R+ L+ +L Sbjct: 61 QFFVNYRWLGGMLTNWKTVRQSIKRLKDLENQSQDGTFDKLTKKEVLILNRELISLENSL 120 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 GI++MGGLPD +F +E +AI+EA L Sbjct: 121 GGIKNMGGLPDALFTAGAEQEHIAIKEANSL 151 >gi|262317743|dbj|BAI48250.1| 30S ribosomal protein S2 [Biarum tenuifolium] gi|262317746|dbj|BAI48252.1| 30S ribosomal protein S2 [Biarum tenuifolium subsp. zeleborii] Length = 145 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWATTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|83745515|gb|ABC42457.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6509] gi|83745525|gb|ABC42460.1| ribosomal protein subunit 2 [Orobanche cf. rosmarina Jeanmonod 6531] Length = 165 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 WNPKM YI ER + HII+L++T L +A ++ +RG + L V T +D V Sbjct: 1 KWNPKMAPYISAERKHRHIINLTKTARFLYEACNLVFYAASRGKQFLIVGTNKIRADLVE 60 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD-LEELLNKENQGFTKKERLNIERKR 142 +AA ++ + VN K GG +TNW +QK R+ + E +KK+ ++R+ Sbjct: 61 QAAIKAQCHFVNKKLTGGTLTNWSITEARLQKFRNLIIEQKAGRLDCLSKKDAAVVKRQL 120 Query: 143 DKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + ++ L GI+ M LPD++ + D N E A+QE IP + + Sbjct: 121 SRFQKNLGGIKYMRELPDIVIIPDQNEEYKALQECINSGIPTICL 165 >gi|262317671|dbj|BAI48202.1| 30S ribosomal protein S2 [Typhonium albidinervum] gi|262317674|dbj|BAI48204.1| 30S ribosomal protein S2 [Typhonium bulbiferum] gi|262317686|dbj|BAI48212.1| 30S ribosomal protein S2 [Typhonium gracile] gi|262317689|dbj|BAI48214.1| 30S ribosomal protein S2 [Typhonium roxburghii] gi|262317692|dbj|BAI48216.1| 30S ribosomal protein S2 [Typhonium trilobatum] gi|262317695|dbj|BAI48218.1| 30S ribosomal protein S2 [Typhonium sp. TOT-2009] Length = 145 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG +L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHLLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|262317680|dbj|BAI48208.1| 30S ribosomal protein S2 [Typhonium cordifolium] Length = 145 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACNLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG +L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHLLIVGTKNKAADSVASAAIKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNCLPKRDAAMLKRQL 145 >gi|110225641|ref|YP_665647.1| ribosomal protein S2 [Nephroselmis olivacea] gi|6066156|gb|AAF03174.1|AF110138_6 ribosomal protein S2 [Nephroselmis olivacea] Length = 235 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 7/215 (3%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I + G N W+P M + RN +I+D+S+T+ L AL VIS V++ G Sbjct: 18 IDSFFKLSAHIG--NKKWHPTMSSNLIASRNAVYILDISKTIKGLFNALDVISSIVSQKG 75 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILF+ + + + + + + Q VN++W+GG +TNW +S+ I+ + + L+ Sbjct: 76 HILFINSNPLYNKLLQKTCELTEQSYVNNRWVGGTLTNWPIISKEIETYKKVVTQLHLYT 135 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 F + +K+K++ G + PDL+ V++ ++ K AI EA L IP++A+ Sbjct: 136 SLF-----YVSTPRYEKMKKSFQGFQTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAI 190 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 VD+++N + Y IPGN+ S I +++ Sbjct: 191 VDSDTNLSKITYPIPGNNSSYEFIYYCLNIIVKTI 225 >gi|221119128|ref|XP_002156548.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 244 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 40/226 (17%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++L +S V GH WNP YI+ +R+ IIDL+QTV L AL V+S V Sbjct: 57 VDLKKLFDSRVHLGHHEGTWNPLTRPYIYGQRSTQLIIDLNQTVECLNCALNVLSHIVYN 116 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF++ + + + A+ +Y + W G+ TN + QKL DL N Sbjct: 117 QGIILFISMNPRFDYLIQKTARDCEEYFITHGWQKGLFTNSP-LKLGTQKLPDLVIAFNN 175 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 E+ RD AI EA IP++ Sbjct: 176 ----------SRFEKTRD-----------------------------AIIEASMCNIPVI 196 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +VDT+ +P L+ Y IP NDD+ S++ CD+ A ++ +++ Sbjct: 197 GIVDTDCDPRLITYPIPANDDTYDSVSHLCDIFKQAILNAKLKRNE 242 >gi|262317719|dbj|BAI48234.1| 30S ribosomal protein S2 [Typhonium hirsutum] Length = 145 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNP+M +I +R HI +L++T L +A ++ D + Sbjct: 7 NINLEEMMEAGVHFGHGTRKWNPRMAPFISAKRKGIHITNLTRTARFLSEACGLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELL 123 RG L V TK++A+D V AA ++ + VN KWLGGM+TNW T +QK RDL E Sbjct: 67 RGKHFLIVGTKNKAADSVASAATKARCHYVNKKWLGGMLTNWSTTETRLQKFRDLRAEQR 126 Query: 124 NKENQGFTKKERLNIERKR 142 + K++ ++R+ Sbjct: 127 MGKLNRLPKRDAAMLKRQL 145 >gi|41058627|gb|AAR99300.1| ribosomal protein subunit B [Candidatus Blochmannia sansabeanus] Length = 151 Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 66/150 (44%), Positives = 96/150 (64%), Gaps = 1/150 (0%) Query: 30 ERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS 89 + +IF RN HII+L T+ M ++AL ++ + G+ILFV TK AS+ + + A Sbjct: 1 KPFIFGVRNKIHIINLETTILMFKQALVELNKIASLKGKILFVGTKRAASEAIKKTALAC 60 Query: 90 AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRA 148 Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + R+ L+ + Sbjct: 61 NQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFKKLTKKEALILNRELINLENS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L GI++MGGLPD +F V E +AI+EA Sbjct: 121 LGGIKNMGGLPDAIFAVGATHEHIAIKEAN 150 >gi|170094018|ref|XP_001878230.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646684|gb|EDR10929.1| predicted protein [Laccaria bicolor S238N-H82] Length = 200 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 41/232 (17%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 Q TI LL SG FGH + NP Y + R IIDL T+P+L++A+ ++ Sbjct: 1 QTTISALLASGAHFGHASTRMNPNFMPYAYGTRAGITIIDLDHTLPLLRRAVNLVRAVAR 60 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQ--YCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 GG+ILF+ T+S + +AA+R + V +W+ G ++N + + Sbjct: 61 AGGQILFIGTRSDLRPVIQKAAERLGSQGFHVGERWVPGTLSNRRQIFG----------- 109 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGG-LPDLMFVVDTNREKLAIQEARRLR 181 G+ D +PDL +++ +AI E Sbjct: 110 ---------------------------GGVVDKTNVVPDLAIILNPLSNAIAISELSVEH 142 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +P + V+D+N +P +V Y IP ND+++R+ L +++ A +G+A + + + Sbjct: 143 VPTIGVIDSNVDPRVVMYPIPANDENTRTAELIAGVLSVAGREGVALRQADL 194 >gi|198424928|ref|XP_002126843.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S2 (S2mt) (MRP-S2) [Ciona intestinalis] Length = 278 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 47/231 (20%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++L S V FGH+ N M+ Y++ R I DL QT+ + +AL ++ Sbjct: 80 VTMKKLFFSRVYFGHKKGSRNEHMQPYLYGNRLGVDIFDLDQTLEHMHRALNFVAHIAYL 139 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF+ Q V AAK +Y +W G++ N +S+ Sbjct: 140 KGIILFIMRSQQHGHAVELAAKACGEYAHTREWQQGLLLNMGQKHRSV------------ 187 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT----NREKLAIQEARRLR 181 LPD+ + N+E A+ E +L+ Sbjct: 188 -------------------------------RLPDICIFLSLQDVMNQEHPAVAECGKLK 216 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 I V +VD+N NP ++ Y +PGNDDS S+ L+ L A G ++ Sbjct: 217 IATVGIVDSNVNPTMITYPVPGNDDSPESVGLYLQLFQLAIQSGKQKRIEA 267 >gi|193643449|ref|XP_001946401.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Acyrthosiphon pisum] Length = 264 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 34/226 (15%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I+ L E+GV FGH + +M++Y++ R IIDL+ T +LQ+AL V + R Sbjct: 64 VRIKSLFEAGVHFGHTEGTLDNRMKQYLYGNRLGHLIIDLNHTKRLLQQALNVTAHISYR 123 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG ILF+ V AK ++ W GM TN + +S +L DL +LN Sbjct: 124 GGVILFLCQSPLNCLTVENCAKECGEFAHTRYWRDGMFTNSSRIFKSETRLPDLCIVLNT 183 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + + + + + +A ++ IP + Sbjct: 184 LSSTSK----------------------------------NNSGQHSVLSDAAKMLIPTI 209 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 A+VDT++NP++V Y IPGNDD+ +I L+CDL + + + Sbjct: 210 AIVDTDANPNIVTYPIPGNDDTPSAINLYCDLFKNVILRAKKVRKE 255 >gi|224532778|ref|ZP_03673394.1| ribosomal protein S2 [Borrelia burgdorferi WI91-23] gi|224512266|gb|EEF82651.1| ribosomal protein S2 [Borrelia burgdorferi WI91-23] Length = 140 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 53/140 (37%), Positives = 94/140 (67%), Gaps = 1/140 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIVTMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LFV TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFVGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIERK 141 ++ +KKE + R+ Sbjct: 121 EVDGTFDMISKKEISQLNRE 140 >gi|255588273|ref|XP_002534555.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] gi|223525048|gb|EEF27828.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] Length = 384 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 72/126 (57%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++++++GV FGH WNP+M YI +R HI +L++T L +A ++ D +R Sbjct: 254 VQEMMKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRK 313 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + L V TK++A+D V AA R+ + VN KWLGG++TNW T +QK RDL Sbjct: 314 QFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQKTGR 373 Query: 128 QGFTKK 133 K Sbjct: 374 LNRLPK 379 >gi|41058655|gb|AAR99314.1| ribosomal protein subunit B [Candidatus Blochmannia nearcticus] Length = 151 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 67/150 (44%), Positives = 97/150 (64%), Gaps = 1/150 (0%) Query: 30 ERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS 89 + +IF RN HII+L T+ M +KAL ++ + G+ILFV TK AS+ + + A Sbjct: 1 KPFIFGXRNKIHIINLETTIIMFKKALTELNKIASLKGKILFVGTKRAASESIKKTAIIC 60 Query: 90 AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRA 148 Q+ VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + R+ L+ + Sbjct: 61 NQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSKDGTFKKLTKKEALILNRELINLENS 120 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L GI++MGGLPD +F V + E +AI+EA Sbjct: 121 LGGIKNMGGLPDAIFAVGSAHEYIAIKEAN 150 >gi|301500885|ref|YP_003795297.1| ribosomal protein S2 [Chromera velia] gi|300069431|gb|ADJ66539.1| ribosomal protein S2 [Chromera velia] Length = 286 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 102/241 (42%), Gaps = 11/241 (4%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 TI +L+++ + GH LWN +M Y++ HIID+ QT ++ K + T Sbjct: 5 LTIPELVKANIHLGHHYGLWNRQMLPYLYGIWKGFHIIDVLQTARLISKTYFYLLRTSQN 64 Query: 66 -GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 LF+ T +AA+ + + ++ + G++TNW + Q L+++ Sbjct: 65 ANRHFLFIGTNPLIKSVTKKAAQTAGCFFIDHEVTSGLLTNWLVMKQRKFLFEFLDQITL 124 Query: 125 K----------ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 ++ + + + L L+G++ + LP VD + Sbjct: 125 PVIRAILPILINRSEEEQEFFVTLLTRHQILWSELNGLKGLVTLPRCFIFVDPIYDYELF 184 Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +A L+ +V +VD+N NP+ IP N+D+ ++ + +++A G ++ Sbjct: 185 AQALILKRTLVGLVDSNCNPEHFVAPIPANNDNFMAVKFIFEFLSTAIYRGKLKKFKQSF 244 Query: 235 A 235 Sbjct: 245 T 245 >gi|46206262|ref|ZP_00047516.2| COG0052: Ribosomal protein S2 [Magnetospirillum magnetotacticum MS-1] Length = 146 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 87/145 (60%), Positives = 112/145 (77%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 +SDTVAR R+LFV TK QA + EAAKRSAQY VNS WL GM+TNWKT+S SIQ+LR Sbjct: 1 MSDTVARAARVLFVGTKRQALTAIAEAAKRSAQYYVNSCWLVGMLTNWKTISGSIQRLRK 60 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++E L G TKKERL + R+++KL++AL GI+DM G+PDL+FV+DTN+E+LAI+EA+ Sbjct: 61 VDETLEGGAVGLTKKERLMLTREKEKLEKALGGIKDMVGVPDLLFVIDTNKEQLAIKEAQ 120 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPG 203 RL IP+ A+VDT NPD + PG Sbjct: 121 RLGIPVAAIVDTYCNPDGILLHRPG 145 >gi|224534322|ref|ZP_03674900.1| ribosomal protein S2 [Borrelia spielmanii A14S] gi|224514424|gb|EEF84740.1| ribosomal protein S2 [Borrelia spielmanii A14S] Length = 139 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 52/139 (37%), Positives = 93/139 (66%), Gaps = 1/139 (0%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + T++ LLE+GV FGH+ +P+M+R+IF ERN HI+DL +T+ ++ + +++ Sbjct: 1 MAIITMKSLLEAGVHFGHQVKRLDPRMKRFIFSERNEIHILDLQKTLQGIKDSYELVQRV 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G ++LF+ TK QAS+ + + A+RS VN++WLGGM++N+ T+ +S+QKL+ LE++ Sbjct: 61 IKDGKKVLFIGTKKQASEIIEQEARRSDMPYVNNRWLGGMLSNFNTIRKSVQKLKKLEKM 120 Query: 123 -LNKENQGFTKKERLNIER 140 ++ +KKE + R Sbjct: 121 EVDGTFDMISKKEISQLNR 139 >gi|41058647|gb|AAR99310.1| ribosomal protein subunit B [Candidatus Blochmannia chromaiodes] Length = 147 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 1/147 (0%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN HIIDL T M +KAL ++ A G+ILFV TK AS+ V + A Q Sbjct: 1 FIFGVRNKIHIIDLETTSVMFRKALIELNKIAALKGKILFVGTKRAASESVKKTALACNQ 60 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALD 150 + VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + R+ L+ +L Sbjct: 61 FFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFKKLTKKEALILNRELINLENSLG 120 Query: 151 GIRDMGGLPDLMFVVDTNREKLAIQEA 177 GI++MGGLPD +F V E +AI+EA Sbjct: 121 GIKNMGGLPDAIFAVGATHEHIAIKEA 147 >gi|270610599|ref|ZP_06221688.1| ribosomal protein S2 [Haemophilus influenzae HK1212] gi|270318055|gb|EFA29320.1| ribosomal protein S2 [Haemophilus influenzae HK1212] Length = 110 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 73/109 (66%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + Q ++R ++ +GV FGH+ WNP+M+ +IF RN HII+L +T+P+ +AL ++ Sbjct: 1 MAQVSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRI 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQ 111 + G++LFV TK AS+ V AA QY VN +WLGGM+TNWKTV Q Sbjct: 61 ASNNGKVLFVGTKRAASEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQ 109 >gi|297580904|ref|ZP_06942829.1| LOW QUALITY PROTEIN: ribosomal protein S2 [Vibrio cholerae RC385] gi|297534730|gb|EFH73566.1| LOW QUALITY PROTEIN: ribosomal protein S2 [Vibrio cholerae RC385] Length = 154 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 1/142 (0%) Query: 101 GMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 G WKTV QSI++L++LE + TKKE L R+ +KL+++L GI+DMGGLP Sbjct: 11 GWAVCWKTVRQSIKRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLP 70 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D +FV+D + E +AI+EA L IP+ AVVDTNS+PD VDY+IPGNDD+ R++ L+ + A Sbjct: 71 DALFVIDADHEHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAA 130 Query: 220 SAAIDGIARQHSYMGADTKSAG 241 A +G + + + Sbjct: 131 QAINEGRNKDVAAVAEKDGFVE 152 >gi|41058633|gb|AAR99303.1| ribosomal protein subunit B [Candidatus Blochmannia sayi] Length = 147 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 1/147 (0%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN HII+L T+ M +KAL +S V+ G+ILFV TK AS+ V + A Q Sbjct: 1 FIFGVRNKIHIINLEITITMFKKALIELSKIVSLKGKILFVGTKRAASESVKKTAIICNQ 60 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALD 150 + VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + R+ L+ +L Sbjct: 61 FFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSKDGTFKKLTKKEVLILNRELTNLENSLG 120 Query: 151 GIRDMGGLPDLMFVVDTNREKLAIQEA 177 GI++MGGLPD +F + + E +AI+EA Sbjct: 121 GIKNMGGLPDAIFAIGSAHEHIAIKEA 147 >gi|73543665|gb|AAZ77905.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543667|gb|AAZ77906.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 60/137 (43%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIDQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKELA 137 >gi|41058651|gb|AAR99312.1| ribosomal protein subunit B [Candidatus Blochmannia novaeboracensis] Length = 152 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 1/152 (0%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +IF RN IIDL T M +KAL ++ A G+ILFV TK AS+ V + A Q Sbjct: 1 FIFGVRNKXXIIDLEITSVMFRKALIELNKIAALKGKILFVGTKRAASESVKKTALACNQ 60 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALD 150 + VN +WLGGM+TNWKTV QSI++L+DLE + + TKKE L + R+ L+ +L Sbjct: 61 FFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFKKLTKKEALILNRELINLENSLG 120 Query: 151 GIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 GI++MGGLPD +F V E +AI+EA RL I Sbjct: 121 GIKNMGGLPDAIFAVGATHEHIAIKEANRLGI 152 >gi|73543647|gb|AAZ77896.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 85/137 (62%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKEIA 137 >gi|73543645|gb|AAZ77895.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 60/137 (43%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M LP + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELPCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKEIA 137 >gi|254706656|ref|ZP_05168484.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 127 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 76/125 (60%), Positives = 98/125 (78%) Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 FTKKERLN+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL IP+VAV+D Sbjct: 1 FTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGIPVVAVID 60 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKE 249 +N +PD +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E V Sbjct: 61 SNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVEAPVEPAL 120 Query: 250 GMQLE 254 E Sbjct: 121 QAPAE 125 >gi|225418690|ref|ZP_03761879.1| hypothetical protein CLOSTASPAR_05914 [Clostridium asparagiforme DSM 15981] gi|225041780|gb|EEG52026.1| hypothetical protein CLOSTASPAR_05914 [Clostridium asparagiforme DSM 15981] Length = 149 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 1/148 (0%) Query: 102 MMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD 160 M+TN+KT+ I +L+ +E + + KKE + ++++ DKL+R L GI+DM LPD Sbjct: 1 MLTNFKTIQSRIGRLKAIEAMSQDGTFDVLPKKEVIALKKEWDKLERNLGGIKDMKRLPD 60 Query: 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +FVVD +E + +QEA L IP++ +VDTN +P+ +DYVIPGNDD+ R++ L +A Sbjct: 61 AIFVVDPKKEHICVQEAHTLGIPLIGIVDTNCDPEELDYVIPGNDDAIRAVKLIVSKMAD 120 Query: 221 AAIDGIARQHSYMGADTKSAGETVVHSK 248 A I+ + + + E ++ Sbjct: 121 AVIEAKQGEVLEGAMEIEIPVEAFEAAE 148 >gi|73543663|gb|AAZ77904.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 85/137 (62%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M L + T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MELSCKLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKTIEQERSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKELA 137 >gi|268554726|ref|XP_002635350.1| Hypothetical protein CBG01521 [Caenorhabditis briggsae] gi|187038161|emb|CAP22735.1| hypothetical protein CBG_01521 [Caenorhabditis briggsae AF16] Length = 257 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 38/223 (17%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++ ++ + +GH+ N M+ ++ ER + DL T L +AL ++ RGG Sbjct: 66 VDEMFKARLHYGHKIGTVNNNMKWALYGERLGVCVFDLDITKQYLVRALNFVAHVAMRGG 125 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV + V +AA+ QY KW G +TN + + + +L D L+ Sbjct: 126 MILFVTSNRDTMFDVEKAAEEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVFFLST-- 183 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + AI EA ++ IP + V Sbjct: 184 ------------------------------------LTSLGENHPAIIEAAKMTIPTIGV 207 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 VD+NS+P + Y+IP NDD+ +S + A G + Sbjct: 208 VDSNSDPAYLTYLIPANDDTPQSTEYLLRMFKEAIRKGQDERK 250 >gi|224073688|ref|XP_002199501.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 179 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 87/209 (41%), Gaps = 38/209 (18%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 ME Y F R + IIDL QT+ LQ AL + RGG ILFV+ + Q V A+ Sbjct: 1 MEPYHFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYRGGIILFVSRRRQFCHLVESTARA 60 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 +Y W GG++TN + +L DL L+ N Sbjct: 61 CGEYAHTRYWQGGLLTNAHILFGPGVRLPDLLIFLSTLN--------------------- 99 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 + +AI++A ++ IP V VVDTN NP L+ Y +PGNDDS Sbjct: 100 -----------------NVFEPHVAIRDAAKMNIPTVGVVDTNCNPCLISYPVPGNDDSP 142 Query: 209 RSIALFCDLVASAAIDGIARQHSYMGADT 237 ++ L+C L I ++ + Sbjct: 143 AAMELYCKLFRMTIIRAKDKRRQSEAVEE 171 >gi|41058653|gb|AAR99313.1| ribosomal protein subunit B [Candidatus Blochmannia americanus] Length = 147 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 68/146 (46%), Positives = 94/146 (64%), Gaps = 1/146 (0%) Query: 34 FCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYC 93 F RN HIIDL T+ M ++AL ++ + G+ILFV TK AS+ V + A Q+ Sbjct: 1 FGVRNKIHIIDLETTILMFKQALIELNKIASLKGKILFVGTKRAASEAVKKTALACNQFF 60 Query: 94 VNSKWLGGMMTNWKTVSQSIQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGI 152 VN++WLGGM+TNWKTV QSI++L+DLE + Q TKKE L + R+ L+ +L GI Sbjct: 61 VNNRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFQKLTKKEALILNRELINLENSLGGI 120 Query: 153 RDMGGLPDLMFVVDTNREKLAIQEAR 178 ++MGGLPD +F V E +AI+EA Sbjct: 121 KNMGGLPDAIFAVGATHEDIAIKEAN 146 >gi|325989653|ref|YP_004249352.1| 30S ribosomal protein S2 [Mycoplasma suis KI3806] gi|323574738|emb|CBZ40394.1| 30S ribosomal protein S2 [Mycoplasma suis] Length = 189 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 105/178 (58%), Gaps = 4/178 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVA 64 ++ +++E + G ++ LW PKM Y+ E HII+L +T+ LQ + D Sbjct: 8 ISLEKMIEFDLHLGAKSRLWEPKMAPYLLKEEYKKRHIINLEKTMEHLQSVYDYLYDLSR 67 Query: 65 RGGRILFVAT-KSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G I+FV++ +D V E+AKR + + +WLGG+ TN+K V++++ KL +L++ L Sbjct: 68 SGLEIMFVSSKNKVIADIVKESAKRVNAFYITQRWLGGLFTNFKQVNKTLNKLTELDDFL 127 Query: 124 NKEN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +EN Q TKKE + +K+ K+++ DGI+ + LP+++ + + + + I+EA++ Sbjct: 128 RQENLHQQLTKKEISQLRKKKQKIEKNYDGIKGLSKLPNVLVIFNPVNDLIPIKEAKK 185 >gi|73543627|gb|AAZ77886.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543629|gb|AAZ77887.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543633|gb|AAZ77889.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543635|gb|AAZ77890.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543637|gb|AAZ77891.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543639|gb|AAZ77892.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543655|gb|AAZ77900.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G TKKE Sbjct: 121 ELDLEASNSGLTKKELA 137 >gi|296419931|ref|XP_002839545.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635706|emb|CAZ83736.1| unnamed protein product [Tuber melanosporum] Length = 311 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 23/207 (11%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ + SG GH LWNP RYI R+N HII L L++A +V+ Sbjct: 118 DITLELFMASGAHLGHLTSLWNPGNARYIHGIRDNIHIISLETIAAHLRRAARVVEGITR 177 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 GG I+F+ T+ CV+ AAK V W+ G +TN + Sbjct: 178 AGGFIVFIGTREGQERCVINAAKMCGGAHVFDWWIAGTITNAHNLL-------------- 223 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRD-MGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R +ER +L I D +PDL+ V++ +A+ E +P Sbjct: 224 --------RKRKVVERDMADRVVSLKPIDDGRVVVPDLVVVLNPMENSVALHECALAGVP 275 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRS 210 + +VDT+ +P V Y IP NDDS R+ Sbjct: 276 TIGIVDTDMDPLRVTYPIPCNDDSLRA 302 >gi|73543641|gb|AAZ77893.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543649|gb|AAZ77897.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543651|gb|AAZ77898.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543653|gb|AAZ77899.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543659|gb|AAZ77902.1| S2 ribosomal protein [Chlamydia trachomatis] gi|73543661|gb|AAZ77903.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 82/131 (62%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I T+ + Sbjct: 7 LTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACIQTTIGQ 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 67 EKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLEA 126 Query: 126 ENQGFTKKERL 136 N G TKKE Sbjct: 127 SNSGLTKKELA 137 >gi|164657091|ref|XP_001729672.1| hypothetical protein MGL_3216 [Malassezia globosa CBS 7966] gi|159103565|gb|EDP42458.1| hypothetical protein MGL_3216 [Malassezia globosa CBS 7966] Length = 379 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 20/240 (8%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQ-TVPMLQKALQVISDT 62 Q T+ LL + Q GH E Y++ R+ +ID+ + T+P L++A+QV+ Sbjct: 120 HQLTLSHLLAATAQMGHAKQHVTRSFEPYLYGYRHGMGVIDVERATLPALRRAIQVVRGI 179 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQ--YCVN-SKWLGGMMTNWKTVSQSIQKLRDL 119 G IL + T+ + A +R + V+ +WL G++TN + S Sbjct: 180 TENDGIILIIGTRPNLRPAIRSAIERLGGNGFHVSMDRWLPGVLTNASKLLAS------- 232 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + +K ++E + K A G R PDL+ V++ A++EA + Sbjct: 233 ----ATQYSVRSKHSDDDVEEVPNMTKLATQGYR-----PDLVIVLNPTENGHALREATQ 283 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP + ++DTN +P V Y IP NDDS R L L++ A DG+ R+ + + A KS Sbjct: 284 CHIPTMGIIDTNVDPRSVTYAIPANDDSPRVAELVIGLLSKAGEDGLRRRRAALEAWEKS 343 >gi|83745345|gb|ABC42384.1| ribosomal protein subunit 2 [Phelipanche purpurea] Length = 161 Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Query: 27 PKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAA 86 PKM YI E + HII+L++T L +A ++ + +RG + L V T++ +D V EAA Sbjct: 1 PKMAPYISAESKHRHIINLTKTARFLYEACNLVFNAASRGKQFLIVGTETITADLVEEAA 60 Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKL 145 ++ + VN KW GG++TNW + ++ L + + KK+ ++R+ + Sbjct: 61 IKADCHFVNKKWTGGLLTNWSITEERLKYFNYLRVKEIKGGFDCLPKKDAAVVKRQLSRF 120 Query: 146 KRALDGIRDMGGLPDLMFVV--DTNREKLAIQEARRLRIPI 184 ++ L GI++M GLPD++ ++ + N E A+QE L IP Sbjct: 121 QKTLGGIKNMSGLPDIVIILYQNKNEEYKALQECITLGIPT 161 >gi|312076041|ref|XP_003140684.1| 28S ribosomal protein S2 [Loa loa] gi|307764151|gb|EFO23385.1| 28S ribosomal protein S2 [Loa loa] Length = 255 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 84/226 (37%), Gaps = 38/226 (16%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 I L + +GH+ N +M+ +F ER I DL +T L AL ++ R Sbjct: 63 IKIDDLFHARAHYGHKVGTVNERMKWSLFGERLGVCIFDLQKTRECLITALNFVAHMAMR 122 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LF+ T V A ++ W + N K + + +L D L+ Sbjct: 123 GGMFLFITTGRNNMLMVERKALEIDEFAHVRGWKEDTLLNAKALFGAPIRLPDTIIFLST 182 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + A++EA ++ IP V Sbjct: 183 --------------------------------------LTSILETHPAVREAAKMVIPTV 204 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 VVD+N++P + Y IPGNDDS+ S+ F D A G + S Sbjct: 205 GVVDSNADPTYITYPIPGNDDSTSSVQYFMDCFVKAIKMGKESRRS 250 >gi|73543643|gb|AAZ77894.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 56/137 (40%), Positives = 81/137 (59%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNPKM+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPKMKPFIFEEKNGLYIIDLAKTLGQLKKAVSCI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ILFV TK QA + E A ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QKIIEQERSILFVGTKKQAKQIIREVAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G KK L Sbjct: 121 ELDLEASNSGLRKKRSL 137 >gi|255565956|ref|XP_002523966.1| utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis] gi|223536693|gb|EEF38334.1| utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis] Length = 624 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 42/281 (14%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL + G R + K+ Y + RN+ IID +T+ L+ A IS Sbjct: 1 MTIHSIVIQKLLSTNAHLGRRVAAQHFKI--YTYGIRNSQAIIDSDKTLICLRNAASFIS 58 Query: 61 DTVA-RGGRILFVATKSQASDCVMEAAKRSAQYCV--NSKW-LGGMMTNWKTVSQSIQKL 116 + R LFV T + V + K+ Y N W +GG +TN + + + Sbjct: 59 HLARDKKARFLFVNTNPLFDEIVEQMTKKIGIYSPRDNVMWRMGGFLTNSFSPKKFRSRN 118 Query: 117 RDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 + + I+ PD + V+DT R+ I E Sbjct: 119 KKVC----------------------------FGPIQP----PDCVVVLDTERKSSVILE 146 Query: 177 ARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 A RL++PIVA+VD+ + + Y +P ND S + + LFC+++ + + + Sbjct: 147 ADRLQVPIVALVDSTMPWEYFKKIAYPVPAND-SVQFVYLFCNMITKTFLLEQKKLRALK 205 Query: 234 GADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 G + + S+E Q E ++S E+ +VP Sbjct: 206 GDVKEELAVSKKESREEGQQIEQTKSESKISSAMDELLLVP 246 >gi|308496805|ref|XP_003110590.1| hypothetical protein CRE_05534 [Caenorhabditis remanei] gi|308243931|gb|EFO87883.1| hypothetical protein CRE_05534 [Caenorhabditis remanei] Length = 261 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 38/223 (17%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + ++ ++ + +GH+ N M+ ++ ER + DL T L +AL ++ RGG Sbjct: 71 VDEMFKARIHYGHKVGTVNNNMKWALYGERLGVCLFDLDITKQYLVRALNFVAHVSMRGG 130 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV + V +AA+ QY KW G +TN + + + +L D L+ Sbjct: 131 MILFVTSNRDTMFDVEKAAEEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVCFLST-- 188 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + AI EA ++ IP + V Sbjct: 189 ------------------------------------LTSLGENHPAIIEAAKMAIPTIGV 212 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 VD+NS+P + Y++P NDD+ +S + A G + Sbjct: 213 VDSNSDPAYLTYLVPANDDTPQSTEYLLRMFKEAVRRGQDERK 255 >gi|73543631|gb|AAZ77888.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 1/137 (0%) Query: 1 MALP-QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M P T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I Sbjct: 1 MEFPCTLTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACI 60 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L + Sbjct: 61 QTTIGQEKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRI 120 Query: 120 EELLNKENQGFTKKERL 136 E L N G KK L Sbjct: 121 ELDLEASNSGLRKKSSL 137 >gi|321437417|gb|ADW83719.1| ribosomal protein S2 [Musa acuminata AAA Group] Length = 134 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 1/127 (0%) Query: 101 GMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 GM+TNW T +QK RDL E + K++ ++RK L+ L GI+ M GLP Sbjct: 1 GMLTNWSTTETRLQKFRDLRAEQKMGKLNRLPKRDAAMLKRKLSALQTYLGGIKYMTGLP 60 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 D++ +VD E +A++E L IP + ++DTN +PDL D IP NDD+ SI L + + Sbjct: 61 DIVIIVDQQEEYMALRECVILGIPTICLIDTNCDPDLADISIPANDDAIASIRLVLNKLV 120 Query: 220 SAAIDGI 226 SA +G Sbjct: 121 SAICEGR 127 >gi|17564586|ref|NP_505180.1| hypothetical protein T23B12.3 [Caenorhabditis elegans] gi|2384913|gb|AAB69935.1| Hypothetical protein T23B12.3 [Caenorhabditis elegans] Length = 264 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 38/225 (16%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I ++ ++ + +GH+ N M+ ++ ER + DL T L +AL ++ RGG Sbjct: 74 IDEMFKARLHYGHKVGTVNNNMKWALYGERLGVCLFDLDITKKYLVRALNFVAHVSLRGG 133 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILFV + V +AA QY KW G +TN + + + +L D L+ Sbjct: 134 MILFVTSNRDTMFDVEKAADEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVCFLST-- 191 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + AI EA ++ IP + V Sbjct: 192 ------------------------------------LTSLGENHPAIVEAAKMAIPTIGV 215 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSY 232 VD+NS+P + Y++P NDD+ +S + A G + Sbjct: 216 VDSNSDPAYLTYLVPANDDTPQSTEYLLRMFKEAVRKGQEERKRQ 260 >gi|73543657|gb|AAZ77901.1| S2 ribosomal protein [Chlamydia trachomatis] Length = 137 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 81/131 (61%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+++LLESG FGH+ WNP+M+ +IF E+N +IIDL++T+ L+KA+ I T+ + Sbjct: 7 LTLKELLESGAHFGHQTSRWNPRMKPFIFEEKNGLYIIDLAKTLAQLKKAVACIQTTIGQ 66 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ILFV TK QA + EAA ++ + +WLGGM+TN T+ S++ L +E L Sbjct: 67 EKSILFVGTKKQAKQIIREAAIECGEFFASERWLGGMLTNMATIRNSVKTLNRIELDLEA 126 Query: 126 ENQGFTKKERL 136 N G KK L Sbjct: 127 SNSGLRKKSSL 137 >gi|331248766|ref|XP_003337005.1| 37S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315995|gb|EFP92586.1| 37S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 374 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 12/226 (5%) Query: 17 QFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 GH L P I+ R++ IID QT+ L++A VI +TV G +LF Sbjct: 139 HLGHNKALTCPTNFPLIYGVRSDIAIIDARQTLSYLRRACNVIRETVFNDGIVLFSNGVP 198 Query: 77 QASDCVMEAAKR--SAQYCVNSK-------WLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + +A++R Y + + W+ G +TN V + +++ L N + Sbjct: 199 GTEKAIKQASERLADNGYSLGIRPNGKGASWVRGTLTNATEVLKRPRQVAKQLRLANPSS 258 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + + +R + + L+ ++ LP L+ + + ++ ++EA +IP +A+ Sbjct: 259 SSSSSGSNEDPQRNKQQQAENLEALK---FLPSLIVLFNPRESRVLLREAALKQIPTIAI 315 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 +D++ +P +V Y IP NDDS RS+ L +++ A +G+ ++ + Sbjct: 316 IDSDVDPRVVTYPIPANDDSVRSVQLIAGVLSRAGQEGLLKRKESL 361 >gi|289810515|ref|ZP_06541144.1| hypothetical protein Salmonellaentericaenterica_41562 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 132 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 57/131 (43%), Positives = 88/131 (67%), Gaps = 1/131 (0%) Query: 113 IQKLRDLEEL-LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREK 171 I++L+DLE + + TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E Sbjct: 2 IKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEH 61 Query: 172 LAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +AI+EA L IP+ A+VDTNS+PD VD+VIPGNDD+ R+++L+ VA+ +G ++ + Sbjct: 62 IAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLA 121 Query: 232 YMGADTKSAGE 242 ++ E Sbjct: 122 SQAEESFVEAE 132 >gi|261314116|ref|ZP_05953313.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] gi|261303142|gb|EEY06639.1| 30S ribosomal protein S2 [Brucella pinnipedialis M163/99/10] Length = 121 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 69/119 (57%), Positives = 92/119 (77%) Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 +N+ER+R+KL RAL GI+DMG +PDLMF++DTN+E +AIQEA+RL IP+VAV+D+N +PD Sbjct: 1 MNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAIAIQEAKRLGIPVVAVIDSNCDPD 60 Query: 196 LVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLE 254 +DY IPGNDD++R+IAL+CDL+A AA+DGIARQ MG D + E V E Sbjct: 61 QIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGIDVGAQVEAPVEPALQAPAE 119 >gi|308072473|dbj|BAJ22098.1| ribosomal protein S2 [Cycas taitungensis] Length = 216 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 30/226 (13%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 +++LL + G R ++ K+ YI+ N I+D +T+ L+ A I + Sbjct: 5 SSLVLQKLLSTNAHLGRRVAAYHSKV--YIYGFGNEIAILDSDKTLICLRNACHFIGSLI 62 Query: 64 ARGGRILFVATKSQASDCVMEAAKR-SAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLE 120 + GR+LFV T S + + + A + C+N +W +GG +T++ ++ +K+R Sbjct: 63 RKKGRLLFVNTNSLFDEIIEQMALSLIDRSCINDYQWRIGGFLTDYSSMHLFPKKIR--- 119 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 R +K G + PD + +++ +RE I A RL Sbjct: 120 -----------------FLRPGNKKINFFGG-SGLNQRPDCVVIMNADRESSVILGADRL 161 Query: 181 RIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +IPIV++VD+N + Y IP ND S + + LFC+L+ + Sbjct: 162 QIPIVSLVDSNIPLGLCKGITYPIPAND-SIQFVYLFCNLITKTVL 206 >gi|225461465|ref|XP_002282433.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 220 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 40/256 (15%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL + G R + K+ Y + RN +ID +T+ ++ A ++ Sbjct: 1 MTIHSLVIQKLLSTNAHMGRRLVEHHFKV--YTYGFRNGCAVIDSDKTLICMRNACDFMA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKW-LGGMMTNWKTVSQSIQKLRDL 119 V + GR LFV T S + V + ++ + ++ W LGG +TN + + + + + Sbjct: 59 SLVRQKGRFLFVNTNSLFDEIVEQMTRKIGCFTPDAPWRLGGFLTNSSSPKKFRSRNKKI 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I PD + ++DT R+ IQEA R Sbjct: 119 --------------------------------IFGPSQPPDCVVILDTERKSSVIQEASR 146 Query: 180 LRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 L IPIV+VVD + D + Y IP D S + + LFC+L+ + ++ + Sbjct: 147 LEIPIVSVVDPSMPLDTFKKIAYPIPAKD-SVQFVYLFCNLITKTFLY-EQKKMGLGKKE 204 Query: 237 TKSAGETVVHSKEGMQ 252 ++A + V E + Sbjct: 205 DETARKLAVQKAEKNE 220 >gi|332140469|ref|YP_004426207.1| ribosomal protein S2 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550491|gb|AEA97209.1| ribosomal protein S2 [Alteromonas macleodii str. 'Deep ecotype'] Length = 213 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 84/131 (64%), Gaps = 5/131 (3%) Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++ + + TKKE L ++R+ DKL+ +L GI+DMGGLPD +FV+D + E +A+ EAR Sbjct: 88 EQQAQDGTFEKLTKKEALMLQREMDKLENSLGGIKDMGGLPDAIFVIDADHEHIAVTEAR 147 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 L IP+V VVDTNSNPD VDY+IPGNDD+ R+I L+ D A+A G + + Sbjct: 148 NLGIPVVGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLDAAANAINSGR-----ESNLEVQ 202 Query: 239 SAGETVVHSKE 249 + + V + E Sbjct: 203 AEQDDFVEAAE 213 >gi|11497488|ref|NP_042278.1| ribosomal protein S2 [Prototheca wickerhamii] gi|1173299|sp|P46741|RT02_PROWI RecName: Full=Ribosomal protein S2, mitochondrial gi|467879|gb|AAD12666.1| ribosomal protein S2 [Prototheca wickerhamii] Length = 274 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 30/233 (12%) Query: 13 ESGVQFGHR------NFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++G GH+ W+P M +Y R+N I ++ QT L +A V++ + G Sbjct: 37 KAGTHIGHKSIHLSETHSWHPSMAQYHLGIRDNITICNVQQTQKCLSRAFYVLTQILDNG 96 Query: 67 GRILFVATKSQASDCVMEAAK----------RSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 G +L V T + + + K SA KW+GG +TN+K +S+SI Sbjct: 97 GNVLIVNTNPEFYKLSINSMKFIEKNLPFQTFSAISYCFYKWIGGTLTNYKQISKSIYCY 156 Query: 117 RDLEELLNKENQGFTKKERLNIERKRDKLKRALDG---------IRDMGGLPDLMFVVDT 167 + K F +K ++ R K+K+ G + + PD++F+ + Sbjct: 157 VKFTQRCGK----FCEKNNIDFTR-YQKIKKCFQGYGSVSGDSIVMSLQKKPDVIFIFNP 211 Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 K I EA RL+IP++ D +SN + + Y IP N+ S + Sbjct: 212 GDNKNLILEANRLQIPVIGCTDMSSNTNGISYPIPCNNTSVEFTLYLYKKLYK 264 >gi|205373434|ref|ZP_03226238.1| 30S ribosomal protein S2 [Bacillus coahuilensis m4-4] Length = 137 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 45/121 (37%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Query: 108 TVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 T+ + I +L+ +E++ + KKE + ++++ ++L + L GI+DM LPD +F+VD Sbjct: 3 TIQKRIGRLKAIEKMEEDGTFDVLPKKEVVQLKKEHERLVKFLGGIKDMKSLPDALFIVD 62 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +E++A+ EAR+L IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 63 PRKERIAVAEARKLNIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTGKMADAILEAK 122 Query: 227 A 227 Sbjct: 123 Q 123 >gi|58266890|ref|XP_570601.1| ribosomal protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110594|ref|XP_776124.1| hypothetical protein CNBD1720 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258792|gb|EAL21477.1| hypothetical protein CNBD1720 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226834|gb|AAW43294.1| ribosomal protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 307 Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 42/239 (17%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + T+ LL SG GH + + YI+ +R IIDL QT+P+L++ ++ D V Sbjct: 97 HEATLSTLLASGAALGHAANITSHAYTPYIYGKRAGLSIIDLDQTLPILRRTAALVKDIV 156 Query: 64 ARGGRILFVATKSQASDCVMEAAKR--SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 G +L V T+ + +A +R + V +W+ G++TN +T Sbjct: 157 KADGVVLIVGTRPGHQKMIQKAKERLEDNGFAV-GQWIPGLLTNAETFFGM--------- 206 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 + L ++ PDL+ ++ + AI+E Sbjct: 207 --------------------KPLLDKSYK--------PDLVIFLNASENTPAIRECTSRH 238 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IP V +VDT+++P LV Y IP N +S R+ L ++ A +G R+ A+ K++ Sbjct: 239 IPTVGIVDTDTDPRLVTYPIPANMESMRTAELIISTLSIAGQEG--RRLRLKEAERKAS 295 >gi|229315904|ref|YP_002860130.1| ribosomal protein S2 [Micromonas sp. RCC299] gi|226431189|gb|ACO55594.1| ribosomal protein S2 [Micromonas sp. RCC299] Length = 215 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 9/220 (4%) Query: 3 LPQFTIRQLLESG-VQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + T+ LL + G +P M Y+ R+ +++ +T+ QKAL + Sbjct: 1 MESKTLPSLLHTNKTHVG--AVEMSPWMYPYMLGYRDKVPFLNVEETLIGTQKALVFLKS 58 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + G IL V T S V + + + VN W+GG++TNW+ + S+ + Sbjct: 59 VREKKGEILIVNTHPAFSKVVKKTSTILGIHYVNEHWIGGLLTNWQQLKYSVHAYKKFNS 118 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR-EKLAIQEARRL 180 ++ + K K K+ DGI++M PD + ++ K I+EA+RL Sbjct: 119 FISPIITKD-----IVAFPKYTKAKKRFDGIQNMVFKPDAIILLQATTAHKSIIEEAKRL 173 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +IP++A VD++S V+Y IP N S C L+ Sbjct: 174 KIPVIACVDSSSPTVSVEYPIPINTYSKAFCHFLCRLLVK 213 >gi|42820639|emb|CAF32223.1| ribosomal protein S2 [Pseudoalteromonas haloplanktis TAC125] Length = 120 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 51/104 (49%), Positives = 79/104 (75%) Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + + TKKE L + R+ +KL+++L GI++MGGLPD +FV+D + E +AI+EA L IP Sbjct: 1 DGTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLGIP 60 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +VA+VDTNSNPD VD+++PGNDD+ R+++L+ + VA+A +G Sbjct: 61 VVAIVDTNSNPDGVDFIVPGNDDAIRAVSLYTNAVATAITEGRE 104 >gi|321258065|ref|XP_003193802.1| ribosomal protein [Cryptococcus gattii WM276] gi|317460272|gb|ADV22015.1| ribosomal protein, putative [Cryptococcus gattii WM276] Length = 307 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 42/238 (17%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T+ LL SG GH + + YI+ +R IIDL QT+P+L++ ++ D V Sbjct: 98 EATLSTLLASGAALGHAANITSHAYTPYIYGKRAGLSIIDLDQTLPILRRTAALVKDIVK 157 Query: 65 RGGRILFVATKSQASDCVMEAAKR--SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 G +L V T+ + +A +R + V +W+ G++TN +T Sbjct: 158 ADGVVLIVGTRPGHQKMIQKAKERLEDNGFAV-GQWIPGLLTNAETFFGM---------- 206 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + L ++ PDL+ ++ + AI+E I Sbjct: 207 -------------------KPLLDKSYK--------PDLVIFLNASENTPAIRECTSRHI 239 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 P +VDT+++P LV Y IP N +S R+ L ++ A +G R+ A+ K++ Sbjct: 240 PTAGIVDTDTDPRLVTYPIPANMESLRTAELIISTLSIAGQEG--RRLRLKEAERKAS 295 >gi|42561137|ref|NP_975588.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492634|emb|CAE77230.1| 30S ribosomal protein S2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 128 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 49/121 (40%), Positives = 75/121 (61%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + T +L +GVQ+GH+ WNPKM+ YI+ +N HIIDL +T+ L A +++ + Sbjct: 4 EITREELSAAGVQYGHQTKRWNPKMKSYIYGVKNKNHIIDLEKTITHLNTAQKLLETLGS 63 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +ILFV TK + V EAA RS + +N++WLGG +TN KT+ I+ L ++EE Sbjct: 64 KQQKILFVGTKRSGKNAVKEAALRSGNFYINNRWLGGTLTNLKTILIRIKALWEIEEEKK 123 Query: 125 K 125 K Sbjct: 124 K 124 >gi|314908360|gb|ADT62127.1| ribosomal protein S2 [Isoetes engelmannii] Length = 232 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 31/221 (14%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 R L + GHR I +++ I+ + +T+ L++A +I+ + G Sbjct: 12 RLLPSTHAYLGHR-----------IPIFKDSLEILQIEKTLICLRRACNLIASIIRGEGH 60 Query: 69 ILFVATK--SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V S V AKR+ Q ++ +W+GG++TNW+ + +L Sbjct: 61 FVLVNANANKVYSKIVQGTAKRTNQSYIDHEWIGGVLTNWEHM----------IDLQKHG 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + T L+ R K+K L GI +P+ + V++ N +AI EA +LRIPIV+ Sbjct: 111 DDALTSSPFLDYLR---KMKNCLGGIMT-HRIPNCLVVMNANLSSMAILEADQLRIPIVS 166 Query: 187 VVD---TNSNPDLVDYVIPGND-DSSRSIALFCDLVASAAI 223 VD +N +L+ Y IP ND DS + + LFC+LV I Sbjct: 167 PVDCHISNGLHELITYPIPVNDYDSIQFVYLFCNLVTKTVI 207 >gi|313623502|gb|EFR93697.1| ribosomal protein S2 [Listeria innocua FSL J1-023] Length = 133 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 46/106 (43%), Positives = 74/106 (69%) Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + + + KKE + ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR Sbjct: 2 EKMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEAR 61 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +L IPI+ +VDTN +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 62 KLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 107 >gi|3914935|sp|O65751|RSSA_CICAR RecName: Full=40S ribosomal protein SA; AltName: Full=p40 gi|3204099|emb|CAA07226.1| ribosome-associated protein p40 [Cicer arietinum] Length = 300 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 49/275 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 + + I+ +L + V G +N N +MERYIF RN +II+L +T L A ++I Sbjct: 11 LTQKEADIQMMLAADVHLGTKN--CNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARII 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN Sbjct: 69 V-AIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN-------------- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L+ + P L+ + D + I+EA Sbjct: 114 ------------------------QLQTSF-------SEPRLLILTDPRTDHQPIKEAAL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP +A DT+S + VD IP N+ SI L+A + + D Sbjct: 143 GNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMV 202 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 +E Q EED ++ + V+ +P Sbjct: 203 DLFFYREPEEAKQPEEDEVAAPDYAIADFNVSAIP 237 >gi|169848048|ref|XP_001830732.1| 40S ribosomal protein S0 [Coprinopsis cinerea okayama7#130] gi|229891584|sp|A8N7C6|RSSA_COPC7 RecName: Full=40S ribosomal protein S0 gi|116508206|gb|EAU91101.1| 40S ribosomal protein S0 [Coprinopsis cinerea okayama7#130] Length = 295 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 90/225 (40%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + I+ LL + G +N + +ME Y++ R + HI+++ +T L A ++I Sbjct: 9 LSATEEDIQLLLAAQCHIGTKN--CDKQMEPYVWKRRADGIHILNIGKTWEKLVLAARII 66 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 67 A-AVENPNDICVISARPYGHRAVLKFAANTGAQAIAGRFTPGSFTNYIT-----RSFKE- 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + AI+EA Sbjct: 120 ---------------------------------------PRIIIVTDPRVDHQAIREASY 140 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ VD IP N+ + SI L L+A + Sbjct: 141 VNIPVIALCDTDAPLQFVDVAIPTNNKTRHSIGLIWWLLAREVLR 185 >gi|170092519|ref|XP_001877481.1| predicted protein [Laccaria bicolor S238N-H82] gi|229891586|sp|B0D174|RSSA_LACBS RecName: Full=40S ribosomal protein S0 gi|164647340|gb|EDR11584.1| predicted protein [Laccaria bicolor S238N-H82] Length = 283 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +A + I+ LL + G +N + +ME Y++ R + HI+++ +T L A +VI Sbjct: 9 LAATEEEIQLLLAAQCHIGTKN--CDKQMEPYVWKRRADGIHILNIGKTWEKLVLAARVI 66 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 67 A-AVENPNDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYIT-----RSFKE- 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + AI+EA Sbjct: 120 ---------------------------------------PRLIIVTDPRVDHQAIREASY 140 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ VD IP N+ + SI L L+A + Sbjct: 141 VNIPVIALCDTDAPLKFVDVAIPTNNKTRHSIGLIWWLLAREVLR 185 >gi|296040612|gb|ADG85274.1| ribosomal protein S2 [Silene vulgaris] Length = 90 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 56/90 (62%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV FGH WNP+M YI + HI++L++T L +A ++ D +RG + L Sbjct: 1 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHILNLTRTARFLSEACDLVFDAASRGKQFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK++A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKNKAADLVAWAAIRARCHYVNKKWLGG 90 >gi|241862476|ref|XP_002416382.1| ribosomal protein, putative [Ixodes scapularis] gi|215510596|gb|EEC20049.1| ribosomal protein, putative [Ixodes scapularis] Length = 173 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 61/122 (50%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++R+L E+ GH+ L N M+ YIF R HIIDL QTVP L +AL + R Sbjct: 22 ISVRELFEARAHLGHKEGLLNDLMKPYIFGSRLGHHIIDLDQTVPHLFRALNFAAHIAYR 81 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV Q S V E AK ++ W G+ N + ++ +L DL LL+ Sbjct: 82 DGIILFVTRNQQTSHMVEETAKACGEFAHTRWWRPGLFPNSERQFGTVTRLPDLVVLLST 141 Query: 126 EN 127 + Sbjct: 142 LD 143 >gi|60117136|ref|YP_209599.1| ribosomal protein S2 [Polysphondylium pallidum] gi|51339700|gb|AAU00614.1| ribosomal protein S2 [Polysphondylium pallidum] Length = 244 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 16/225 (7%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + +L++S G + WNP + +I+ R N +I++L TV L++ L +I Sbjct: 12 IEKIQYIELIKSEFYIGCKKSRWNPLLVGFIYKIRKNIYILNLEYTVYQLRRGLNMIKTI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G++L V K + S+ V K+S Q V+ K+ G + + ++ ++L Sbjct: 72 IRNRGQVLMVVLKKKVSNLVKTLLKKSKQGYVDYKYYKGSLIH----------FKESKKL 121 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 L ++ G + + +DK + G +++ P + + TN+ I+E RLRI Sbjct: 122 LYQKISGNIEVDL------QDKTCMKMLGYKNLQKKPSAVIITQTNKSDWLIRECNRLRI 175 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P + +DTN+ L Y I GN ++++ + L + A GI Sbjct: 176 PTICFIDTNTMSMLYTYSIVGNSNTNKHLNLILLFIYHAIFQGIR 220 >gi|296040606|gb|ADG85271.1| ribosomal protein S2 [Silene latifolia] Length = 90 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 56/90 (62%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG + L Sbjct: 1 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDAASRGKKFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK++A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKNKAADLVAWAAIRARCHYVNKKWLGG 90 >gi|255546866|ref|XP_002514491.1| 30S ribosomal protein S2, putative [Ricinus communis] gi|223546390|gb|EEF47891.1| 30S ribosomal protein S2, putative [Ricinus communis] Length = 114 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 57/108 (52%) Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 E K + ++R+ L+ L GI+ M GLPD++ +VD + A++E Sbjct: 1 MEQKTGRLNRLPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQQEDYTALRECIT 60 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 L IP + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 61 LGIPTICLIDTNCDPDLADISIPANDDTIASIRLILNKLVFAICEGRS 108 >gi|296040604|gb|ADG85270.1| ribosomal protein S2 [Silene conica] Length = 90 Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 39/90 (43%), Positives = 55/90 (61%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV FGH WNP+M YI + HII+L++T L +A ++ D +RG + L Sbjct: 1 MEAGVHFGHGIRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDAASRGKQFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK +A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKRKAADLVAWAAIRARCHYVNKKWLGG 90 >gi|121706100|ref|XP_001271313.1| 40S ribosomal protein S0 [Aspergillus clavatus NRRL 1] gi|229891578|sp|A1CL63|RSSA_ASPCL RecName: Full=40S ribosomal protein S0 gi|119399459|gb|EAW09887.1| 40S ribosomal protein S0 [Aspergillus clavatus NRRL 1] Length = 298 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 106/274 (38%), Gaps = 56/274 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ +I L L+A + + A+ ++ + VV Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVL-----RLRGTLANRETEWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE+ + +E + + G E + S Sbjct: 204 LYFYRDPEAEENKEIAEETKVPGAEEIGAGAVES 237 >gi|219121660|ref|XP_002181180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407166|gb|EEC47103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 220 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 100/254 (39%), Gaps = 53/254 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L +GV G RN N M+ YI+ RN HI+++ +T L A +VI + Sbjct: 18 IQMMLSAGVHTGTRNSDSN--MQEYIWRRRNDGVHILNIGKTWEKLVLAARVIV-AIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A + V +W G TN T ++ ++ Sbjct: 75 EDVIAISARPYGMRAVLKFANYTGAQAVAGRWTPGTFTNQIT-----KQFKE-------- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + A++EA + IP++A Sbjct: 122 --------------------------------PRLLIITDPRTDSQAVKEASYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 D++S VD IP N+ SI L L+A + + + S + + + H Sbjct: 150 FCDSDSPLQYVDVAIPANNKGKYSIGLLYWLLAR---EVLRLRGSISRNEWEVPVDLFFH 206 Query: 247 SK-EGMQLEEDSQS 259 E ++ E+ Q+ Sbjct: 207 RDPEELKKNEEEQA 220 >gi|115391503|ref|XP_001213256.1| 40S ribosomal protein S0 [Aspergillus terreus NIH2624] gi|121739314|sp|Q0CQF6|RSSA_ASPTN RecName: Full=40S ribosomal protein S0 gi|114194180|gb|EAU35880.1| 40S ribosomal protein S0 [Aspergillus terreus NIH2624] Length = 300 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 105/274 (38%), Gaps = 56/274 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ SI L L+A + + A ++ + VV Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHSIGLVWWLLAREVL-----RLRGTLASREAEWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE+ + +E + + G + + S Sbjct: 204 LYFYRDPEAEENKEIAEEAKVPGADEIGAGAVES 237 >gi|22550359|ref|NP_689382.1| ribosomal protein S2 [Chaetosphaeridium globosum] gi|22417025|gb|AAM96624.1|AF494279_29 ribosomal protein S2 [Chaetosphaeridium globosum] Length = 191 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 43/221 (19%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNT-HIIDLSQTVPMLQKALQVISDT 62 I +LL+ G + +++ R+NT I DL +T+ +++A + Sbjct: 5 NSLVISKLLKINAHLGRPKLRTSHVSRYFLYGLRSNTRAIFDLEKTLTCIRRACHFLESI 64 Query: 63 VARGGRILFVATKSQASD--CVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + G ILFV+ + + E A ++ Q + +KW+GG++TNWK +S Sbjct: 65 LDKQGCILFVSEGPNSPYNAIIKETALKTNQSFITTKWIGGLLTNWKHISYY-------- 116 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 L+ +R P + V + AIQEA L Sbjct: 117 -------------NHLSYDR------------------PSCLIVFNPCLNFTAIQEANTL 145 Query: 181 RIPIVAVVDTNS-NPDLVDYVIPGNDDSSRSIALFCDLVAS 220 IP+V+++++N N +DY IP N +S I LFC+L+ Sbjct: 146 GIPVVSLMNSNVPNHLKIDYPIPVNHNSISFIYLFCNLIVK 186 >gi|301121570|ref|XP_002908512.1| 40S ribosomal protein SA [Phytophthora infestans T30-4] gi|262103543|gb|EEY61595.1| 40S ribosomal protein SA [Phytophthora infestans T30-4] Length = 283 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G + KM YI+ RN HII++ +T L A +VI V Sbjct: 9 IKMMLAAQVHIG--TRNADSKMADYIWRRRNDGIHIINVGKTWEKLMLAARVIV-AVENP 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A+ + + S++ G TN T ++ R+ Sbjct: 66 EDVIAISARPYGQRAVLKFAQHTGCQAIASRFTPGTFTNQIT-----KQFRE-------- 112 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + A++E+ + +P++A Sbjct: 113 --------------------------------PRLLLITDPRTDSQAVRESSFVNVPVIA 140 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D++S VD IP N+ SI L L+A + Sbjct: 141 FCDSDSPLQFVDVAIPANNKGKLSIGLLYWLLAREVLR 178 >gi|169763710|ref|XP_001727755.1| 40S ribosomal protein S0 [Aspergillus oryzae RIB40] gi|238489667|ref|XP_002376071.1| 40S ribosomal protein S0 [Aspergillus flavus NRRL3357] gi|121938427|sp|Q2UBZ9|RSSA_ASPOR RecName: Full=40S ribosomal protein S0 gi|269969626|sp|B8N513|RSSA_ASPFN RecName: Full=40S ribosomal protein S0 gi|83770783|dbj|BAE60916.1| unnamed protein product [Aspergillus oryzae] gi|220698459|gb|EED54799.1| 40S ribosomal protein S0 [Aspergillus flavus NRRL3357] Length = 299 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 106/272 (38%), Gaps = 52/272 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N + ME Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEQLLAAQCHLGSKNLQVH--MEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AVENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVLA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ SI L ++A + + + + +T+ ++ Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHSIGLVWWMLAR---EVLRLRGTLATRETEWDVVPDLY 205 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE+ + ++ S + E + S Sbjct: 206 FYRDPEAEENKEIADESKVATAEEVGAGAIES 237 >gi|302679998|ref|XP_003029681.1| hypothetical protein SCHCODRAFT_69443 [Schizophyllum commune H4-8] gi|300103371|gb|EFI94778.1| hypothetical protein SCHCODRAFT_69443 [Schizophyllum commune H4-8] Length = 303 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 89/226 (39%), Gaps = 50/226 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN--NTHIIDLSQTVPMLQKALQV 58 ++ + I+ LL + G +N + +ME Y++ R H+I++ +T L A ++ Sbjct: 9 LSATEEDIQLLLAAQCHIGTKN--CDKQMEPYVWKRRADAGIHVINIGKTWEKLVFAARI 66 Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 I+ V + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 67 IA-AVENPNDVCVISARPYGHRAVLKFAANTGAQAIAGRFTPGSFTNYIT-----RSFKE 120 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 P L+ V D + AI+EA Sbjct: 121 ----------------------------------------PRLIIVTDPRVDHQAIREAS 140 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ VD IP N+ + SI L L+A + Sbjct: 141 YVNIPVIALADTDAPLKFVDVAIPTNNKTRHSIGLIWWLLAREVLR 186 >gi|242213890|ref|XP_002472771.1| 40S ribosomal protein S2 [Postia placenta Mad-698-R] gi|269969660|sp|B8PAR0|RSSA_POSPM RecName: Full=40S ribosomal protein S0 gi|220728174|gb|EED82074.1| 40S ribosomal protein S2 [Postia placenta Mad-698-R] Length = 297 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +M Y++ R + HI+++ +T L A ++I+ + Sbjct: 16 IQLLLAAQAHIGSKN--CDKQMLPYVWKRRADGIHILNIGKTWEKLVFAARIIA-AIENP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 73 NDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRLIVVTDPRVDHQAIREASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT++ VD IP N+ S SI L L+A + Sbjct: 148 FCDTDAPLKFVDVAIPTNNKSRHSIGLMWWLLAREVLR 185 >gi|70999137|ref|XP_754290.1| 40S ribosomal protein S0 [Aspergillus fumigatus Af293] gi|74674582|sp|Q4WYK1|RSSA_ASPFU RecName: Full=40S ribosomal protein S0 gi|229891579|sp|B0XWG9|RSSA_ASPFC RecName: Full=40S ribosomal protein S0 gi|66851927|gb|EAL92252.1| 40S ribosomal protein S0 [Aspergillus fumigatus Af293] gi|159127307|gb|EDP52422.1| 40S ribosomal protein S0 [Aspergillus fumigatus A1163] Length = 297 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 105/274 (38%), Gaps = 56/274 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S + VD IP N+ +I L L+A + + A ++ + VV Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLLAREVL-----RLRGTLATRETEWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE+ + ++ + + G E + S Sbjct: 204 LYFYRDPEAEENKEIADEAKVPGAEEIGAGAVES 237 >gi|118484199|gb|ABK93980.1| unknown [Populus trichocarpa] Length = 316 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 98/275 (35%), Gaps = 55/275 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY+F RN +II+L +T L A +VI Sbjct: 16 LSQKELDIQMMLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVI 73 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ + + V++ A+ + + + + G TN S S +L Sbjct: 74 V-AIENPQDMIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFSEPRL--- 129 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + D + I+EA Sbjct: 130 ------------------------------------------LILTDPRTDHQPIKEAAL 147 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP +A+ DT+S + VD IP N+ SI L+A + Sbjct: 148 GNIPTIALCDTDSPMNFVDIGIPANNKGKHSIGCLFWLLARMVL------QMRGTIPQGH 201 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 + +V + EE Q E L + A+ P Sbjct: 202 KWDIMVDLFFYREPEEAKQQEEEDALPAADYALPP 236 >gi|238608426|ref|XP_002397228.1| hypothetical protein MPER_02384 [Moniliophthora perniciosa FA553] gi|215471270|gb|EEB98158.1| hypothetical protein MPER_02384 [Moniliophthora perniciosa FA553] Length = 236 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +ME Y++ RN HI+++ +T L A ++I+ V Sbjct: 65 IQLLLAAQCHIGTKN--CDKQMEPYVWKRRNDGIHILNIGKTWEKLVFAARIIA-AVENP 121 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G +TN+ T + ++ Sbjct: 122 NDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSLTNYIT-----RSFKE-------- 168 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 169 --------------------------------PRLIIVTDPRVDHQAIREAAYVNIPVIA 196 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT++ VD IP + S SI L L+A + Sbjct: 197 LCDTDAPLKFVDVAIPNKNKSKHSIGLIWWLLAREVLR 234 >gi|119490951|ref|XP_001263136.1| 40S ribosomal protein S0 [Neosartorya fischeri NRRL 181] gi|229891595|sp|A1D695|RSSA_NEOFI RecName: Full=40S ribosomal protein S0 gi|119411296|gb|EAW21239.1| 40S ribosomal protein S0 [Neosartorya fischeri NRRL 181] Length = 297 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 105/274 (38%), Gaps = 56/274 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S + VD IP N+ +I L L+A + + A ++ + VV Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLLAREVL-----RLRGTLATRETEWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE+ + ++ + + G E + S Sbjct: 204 LYFYRDPEAEENKEIADETKVPGAEEIGAGAVES 237 >gi|325118820|emb|CBZ54372.1| hypothetical protein NCLIV_048020 [Neospora caninum Liverpool] Length = 328 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 49/224 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++L + +I ++L G +N KM Y+F + H+I+L++T + A +VI Sbjct: 9 LSLQEDSIAKMLICKAHIGTKNV--EHKMRPYVFKSTSEGIHLINLAKTWEKILMAARVI 66 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + +L ++ + S V++ ++ + +W GM+TN T QK + Sbjct: 67 V-AIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTNQIT-----QKFME- 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + A++E+ Sbjct: 120 ---------------------------------------PRLLIVTDPRTDAQAVRESAY 140 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +P++A+ DT+S + VD IP N+ SIAL L+A + Sbjct: 141 ANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLAREVL 184 >gi|118481845|gb|ABK92859.1| unknown [Populus trichocarpa] Length = 316 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 97/275 (35%), Gaps = 55/275 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY+F RN +II+L +T L A +VI Sbjct: 16 LSQKELDIQMMLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVI 73 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ + + V++ A+ + + + + G TN S S +L Sbjct: 74 V-AIENPQDMIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFSEPRL--- 129 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + D + I+EA Sbjct: 130 ------------------------------------------LILTDPRTDHQPIKEAAL 147 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP +A DT+S + VD IP N+ SI L+A + Sbjct: 148 GNIPTIAFCDTDSPMNFVDIGIPANNKGKHSIGCLFWLLARMVL------QMRGTIPQGH 201 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 + +V + EE Q E L + A+ P Sbjct: 202 KWDIMVDLFFYREPEEAKQQEEEDALPAADYALPP 236 >gi|229891756|sp|Q5B8F8|RSSA_EMENI RecName: Full=40S ribosomal protein S0 gi|259485872|tpe|CBF83264.1| TPA: 40S ribosomal protein S0 [Source:UniProtKB/Swiss-Prot;Acc:Q5B8F8] [Aspergillus nidulans FGSC A4] Length = 293 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 103/268 (38%), Gaps = 56/268 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGVNVINVGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ +I L L+A + + A+ + + VV Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLAREVL-----RLRGTLANREVDWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAV 272 + EE+ + +E V ++V Sbjct: 204 LYFYRDPEAEENKEVAEEKVASAEDVGA 231 >gi|160688767|gb|ABX45183.1| ribosomal protein S2 [Polysphondylium pallidum] Length = 244 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 16/225 (7%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + + L S G + WNP + +I+ R +I++L TV L+++L +I + Sbjct: 12 IEKIQYIEFLRSEFYIGCKKSRWNPLLIGFIYKLRKKIYILNLEYTVFQLRRSLNMIKNI 71 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + G+IL V K + S+ V K+S Q V+ K+ G + ++ + +KL + Sbjct: 72 IRNRGQILMVMIKKKISNLVKTLLKKSKQGYVDYKYYNGSLIHF----KESKKLLYQKST 127 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 N E K + G +++ P + + TN+ I+E RL+I Sbjct: 128 GNIEVDLKEKTFIKML------------GYKNLQKKPSAVIITQTNKSDWLIRECNRLKI 175 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 P + +D+N+ L Y I GN ++++ + L + A GI Sbjct: 176 PTICFIDSNTMSLLYTYSIVGNSNTNKHLNLILLFIYHAIFQGIR 220 >gi|242220273|ref|XP_002475905.1| 40S ribosomal protein S0 [Postia placenta Mad-698-R] gi|220724891|gb|EED78906.1| 40S ribosomal protein S0 [Postia placenta Mad-698-R] Length = 209 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + +M Y++ R + HI+++ +T L A ++I+ + Sbjct: 16 IQLLLAAQAHIGSKN--CDKQMLPYVWKRRADGIHILNIGKTWEKLVFAARIIA-AIENP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 73 NDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRLIVVTDPRVDHQAIREASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT++ VD IP N+ S SI L L+A + Sbjct: 148 FCDTDAPLKFVDVAIPTNNKSRHSIGLMWWLLAREVLR 185 >gi|21536611|gb|AAM60943.1| putative ribosomal protein S2 [Arabidopsis thaliana] Length = 219 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 44/246 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL +G G R + K +Y + RN IID +T+ L+ A ++ Sbjct: 1 MTIHAAVIQKLLNTGAHLGRRAAEHHFK--QYAYGTRNGMTIIDSDKTLICLRSAAHFVA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSK----W-LGGMMTNWKTVSQSIQ 114 + G I FV T + + ++R +++ W +GG +TN + + Sbjct: 59 NLAHMRGNIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAINLWKMGGFLTNSYSPKKFRS 118 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + G M PD + V D+ R+ I Sbjct: 119 RHK-----------------------------KLCFGPTTM---PDCVVVFDSERKSSVI 146 Query: 175 QEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 EA +L+IP+VA+VD N + + Y +P D S + + LFC+++ + + Sbjct: 147 LEASKLQIPVVAIVDPNVPLEFFEKITYPVPARD-SVKFVYLFCNVITKCFVAEQMKLGI 205 Query: 232 YMGADT 237 G++ Sbjct: 206 KEGSNE 211 >gi|3334320|sp|O22518|RSSA_SOYBN RecName: Full=40S ribosomal protein SA; AltName: Full=p40 gi|2444420|gb|AAB82659.1| ribosome-associated protein p40 [Glycine max] Length = 310 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERYIF RN +II+L +T LQ A +VI Sbjct: 15 LSQKEADIQMMLAADVHLGTKN--CDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVI 72 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN Sbjct: 73 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN-------------- 117 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L+ + P L+ + D + I+EA Sbjct: 118 ------------------------QLQTSF-------SEPRLLILTDPRTDHQPIKEAAL 146 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 147 GNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 191 >gi|297833032|ref|XP_002884398.1| hypothetical protein ARALYDRAFT_477605 [Arabidopsis lyrata subsp. lyrata] gi|297330238|gb|EFH60657.1| hypothetical protein ARALYDRAFT_477605 [Arabidopsis lyrata subsp. lyrata] Length = 219 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 48/251 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL +G G R + K +Y + RN IID +T+ L+ A ++ Sbjct: 1 MTIHAAVIQKLLNTGAHLGRRAAEHHFK--QYAYGTRNGMTIIDSDKTLICLRSAAHFVA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSK----W-LGGMMTNWKTVSQSIQ 114 + G I FV T + + ++R +++ W +GG +TN + + Sbjct: 59 NLAHMRGNIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRS 118 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + G M PD + V DT R+ I Sbjct: 119 RHK-----------------------------KLCFGPTTM---PDCVVVFDTERKSSVI 146 Query: 175 QEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 EA +L+IP+VA+VD N + + Y +P D S + + LFC+++ + + Sbjct: 147 LEASKLQIPVVAIVDPNVPLEFFEKITYPVPARD-SVKFVYLFCNVITKCFV----AEQM 201 Query: 232 YMGADTKSAGE 242 +G S + Sbjct: 202 KLGIKDGSKED 212 >gi|15228593|ref|NP_187010.1| RPS2 (RIBOSOMAL PROTEIN S2); structural constituent of ribosome [Arabidopsis thaliana] gi|27805714|sp|Q9GCB9|RT02_ARATH RecName: Full=Ribosomal protein S2, mitochondrial gi|6091762|gb|AAF03472.1|AC009327_11 putative ribosomal protein S2 [Arabidopsis thaliana] gi|9944887|gb|AAG03026.1|AF273102_1 ribosomal protein S2 [Arabidopsis thaliana] gi|27764986|gb|AAO23614.1| At3g03600 [Arabidopsis thaliana] gi|110742903|dbj|BAE99348.1| putative ribosomal protein S2 [Arabidopsis thaliana] gi|332640440|gb|AEE73961.1| ribosomal protein S2 [Arabidopsis thaliana] Length = 219 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 44/246 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL +G G R + K +Y + RN IID +T+ L+ A ++ Sbjct: 1 MTIHAAVIQKLLNTGAHLGRRAAEHHFK--QYAYGTRNGMTIIDSDKTLICLRSAAHFVA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSK----W-LGGMMTNWKTVSQSIQ 114 + G I FV T + + ++R +++ W +GG +TN + + Sbjct: 59 NLAHMRGNIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRS 118 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + G M PD + V D+ R+ I Sbjct: 119 RHK-----------------------------KLCFGPTTM---PDCVVVFDSERKSSVI 146 Query: 175 QEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 EA +L+IP+VA+VD N + + Y +P D S + + LFC+++ + + Sbjct: 147 LEASKLQIPVVAIVDPNVPLEFFEKITYPVPARD-SVKFVYLFCNVITKCFVAEQMKLGI 205 Query: 232 YMGADT 237 G++ Sbjct: 206 KEGSNE 211 >gi|225442018|ref|XP_002268664.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|229891614|sp|A5BUU4|RSSA_VITVI RecName: Full=40S ribosomal protein SA gi|147782664|emb|CAN61790.1| hypothetical protein VITISV_015795 [Vitis vinifera] Length = 312 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 95/261 (36%), Gaps = 51/261 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F RN +II+L +T LQ A +VI + Sbjct: 15 IQMMLAAEVHLGTKN--CNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 72 KDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+EA IP +A Sbjct: 111 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKEAALGNIPTIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 DT+S VD IP N+ SI L+A + R+ G + + Sbjct: 147 FCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ--MRRTIAPGHKWDVMVDLFFY 204 Query: 247 SKEGMQLEEDSQSSESSVLDG 267 + E++ ++ G Sbjct: 205 REPEEPKEQEGDEVVAAPDYG 225 >gi|240280823|gb|EER44327.1| mitochondrial ribosomal protein subunit S2 [Ajellomyces capsulatus H143] Length = 267 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 38/109 (34%), Positives = 53/109 (48%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 152 DITLNLLLASQTHLGHATSLWNPANAEYIFGVRQGIHIISLDVTAAYLRRAAKVVREVAR 211 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 GG ILFV T+ V+ AA+R+ V +W+ G +TN + + Sbjct: 212 NGGLILFVGTRKGQRRIVVNAAERAKGCHVFQRWIPGSLTNSEQILGHC 260 >gi|237838815|ref|XP_002368705.1| 40S ribosomal protein S0-A, putative [Toxoplasma gondii ME49] gi|74932395|sp|Q8MPF7|RSSA_TOXGO RecName: Full=40S ribosomal protein SA gi|22035888|emb|CAD43146.1| putative ribosomal protein S2 [Toxoplasma gondii] gi|211966369|gb|EEB01565.1| 40S ribosomal protein S0-A, putative [Toxoplasma gondii ME49] gi|221481462|gb|EEE19848.1| 40S ribosomal protein SA, putative [Toxoplasma gondii GT1] gi|221505428|gb|EEE31073.1| 40S ribosomal protein SA, putative [Toxoplasma gondii VEG] Length = 287 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 100/272 (36%), Gaps = 49/272 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++L + +I ++L G +N KM Y+F + H+I+L++T + A +VI Sbjct: 9 LSLQEDSIAKMLICKAHIGTKNVEH--KMRPYVFKSTSEGIHLINLAKTWEKILMAARVI 66 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + +L ++ + S V++ ++ + +W GM+TN T Sbjct: 67 V-AIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTNQITQKFME------ 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + A++E+ Sbjct: 120 ---------------------------------------PRLLIVTDPRTDAQAVRESAY 140 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +P++A+ DT+S + VD IP N+ SIAL L+A + S Sbjct: 141 ANVPVIALCDTDSPLEHVDICIPCNNKGKESIALMYWLLAREVLYLRGELPSRSVPWDVM 200 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 + E + +E + E++ Q A Sbjct: 201 VDMFLWRDPEEFERKERLEDEEAAPHTAQADA 232 >gi|255578243|ref|XP_002529989.1| 40S ribosomal protein sa, putative [Ricinus communis] gi|223530512|gb|EEF32394.1| 40S ribosomal protein sa, putative [Ricinus communis] Length = 309 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 100/275 (36%), Gaps = 50/275 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY+F RN +II+L +T LQ A +VI Sbjct: 16 LSQKEADIQMMLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVI 73 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 I+ + + V++ A+ + + + + G TN Sbjct: 74 VSI-ENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN-------------- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L+ + P L+ + D + I+EA Sbjct: 119 ------------------------QLQTSF-------SEPRLLILTDPRTDHQPIKEAAL 147 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP +A DT+S + VD IP N+ SI L+A + D Sbjct: 148 GNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILPSHKWDVMV 207 Query: 240 AGETVVHSKEG-MQLEEDSQSSESSVLDGQEVAVV 273 +E Q EED+ + L G + AV Sbjct: 208 DLFFYREPEEAKQQEEEDAVAPLDYALTGGDFAVT 242 >gi|154320664|ref|XP_001559648.1| 40S ribosomal protein S0 [Botryotinia fuckeliana B05.10] gi|229891581|sp|A6RMY2|RSSA_BOTFB RecName: Full=40S ribosomal protein S0 gi|150853493|gb|EDN28685.1| 40S ribosomal protein S0 [Botryotinia fuckeliana B05.10] Length = 296 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 105/272 (38%), Gaps = 56/272 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHLGAKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S + VD IP N+ SI L ++A + + A ++ +T+V Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVL-----RLRGSIASREAEWDTMVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 + EE+ ++ E + G + + Sbjct: 204 LYFYRDPEAEENKEAIEEAKAPGADEVGAAAV 235 >gi|84468334|dbj|BAE71250.1| putative UDP-glucose pyrophosphorylase [Trifolium pratense] Length = 628 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 44/281 (15%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + I++LL + G + + K Y + RN IID +T+ ++ A IS Sbjct: 1 MTIHSVVIQKLLSTNAHIGRQVVTHHFK--EYTYGLRNKMAIIDSDKTLICMRSAFNFIS 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSK--W-LGGMMTNWKTVSQSIQKLR 117 + GR +F+ T + K+ Y +S W GG +TN + + + + Sbjct: 59 CLARQNGRFMFINTNPLFDEIFDLMTKKVGCYSPSSSSLWRTGGFLTNSNSPKKFRSRNK 118 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 L PD + +VDT + I EA Sbjct: 119 KLCF--------------------------------GPTQPPDCIVIVDTESKSSVIDEA 146 Query: 178 RRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +L+IPIVA+VD+ + Y IP N S + + LFC+L+ + + + Sbjct: 147 FKLQIPIVALVDSAMPLHTFSRIAYPIPVN-PSVQFVYLFCNLITKTLL---LEKKNLQL 202 Query: 235 ADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 ++ K E + + + +V+ ++A +PE Sbjct: 203 SNPKIDDREEATKIEDNKRKNNLAKVGITVMPYDKLAPLPE 243 >gi|67525429|ref|XP_660776.1| hypothetical protein AN3172.2 [Aspergillus nidulans FGSC A4] gi|40744567|gb|EAA63743.1| hypothetical protein AN3172.2 [Aspergillus nidulans FGSC A4] Length = 280 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 102/266 (38%), Gaps = 56/266 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGVNVINVGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ +I L L+A + + A+ + + VV Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLAREVL-----RLRGTLANREVDWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEV 270 + EE+ + +E V ++ Sbjct: 204 LYFYRDPEAEENKEVAEEKVASAEDS 229 >gi|224071007|ref|XP_002303327.1| predicted protein [Populus trichocarpa] gi|222840759|gb|EEE78306.1| predicted protein [Populus trichocarpa] Length = 257 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 97/275 (35%), Gaps = 55/275 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY+F RN +II+L +T L A +VI Sbjct: 10 LSQKELDIQMMLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVI 67 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ + + V++ A+ + + + + G TN S S +L Sbjct: 68 V-AIENPQDMIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFSEPRL--- 123 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + D + I+EA Sbjct: 124 ------------------------------------------LILTDPRTDHQPIKEAAL 141 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP +A DT+S + VD IP N+ SI L+A + Sbjct: 142 GNIPTIAFCDTDSPMNFVDIGIPANNKGKHSIGCLFWLLARMVL------QMRGTIPQGH 195 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 + +V + EE Q E L + A+ P Sbjct: 196 KWDIMVDLFFYREPEEAKQQEEEDALPAADYALPP 230 >gi|255938175|ref|XP_002559858.1| Pc13g14510 [Penicillium chrysogenum Wisconsin 54-1255] gi|269969657|sp|B6H2I7|RSSA_PENCW RecName: Full=40S ribosomal protein S0 gi|211584478|emb|CAP92520.1| Pc13g14510 [Penicillium chrysogenum Wisconsin 54-1255] Length = 303 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 106/274 (38%), Gaps = 56/274 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + +++++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKLRADGVNVLNIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADVCVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ +I L ++A + + A ++ +TVV Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHAIGLVWWMLAREVL-----RLRGTLATRETEWDTVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE+ + ++ S + G E + S Sbjct: 204 LYFYRDPEAEENKEIADESKVAGAEEIGAGAVES 237 >gi|58271524|ref|XP_572918.1| 40S ribosomal protein S0 [Cryptococcus neoformans var. neoformans JEC21] gi|134115328|ref|XP_773962.1| hypothetical protein CNBH4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|74683134|sp|Q5KAZ6|RSSA_CRYNE RecName: Full=40S ribosomal protein S0 gi|50256590|gb|EAL19315.1| hypothetical protein CNBH4140 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229177|gb|AAW45611.1| 40S ribosomal protein S0, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 292 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + ME Y++ R + H+I++ +T L A +V++ T+ Sbjct: 17 IQLLLAAQCHLGTKN--CDKSMENYVWKRRADGIHVINVGKTWEKLVLAARVLA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ + + ++ G TN+ T + ++ Sbjct: 74 NDVCVISARPYGHRAVLKYGSFTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRVIIVTDPRVDHQAIREAAYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+++ VD IP N+ S SI L L+ + Sbjct: 149 FCDTDASTKFVDIAIPANNKSRHSIGLMWYLLCREVLR 186 >gi|156040389|ref|XP_001587181.1| 40S ribosomal protein S0 [Sclerotinia sclerotiorum 1980] gi|229891610|sp|A7F2R3|RSSA_SCLS1 RecName: Full=40S ribosomal protein S0 gi|154696267|gb|EDN96005.1| 40S ribosomal protein S0 [Sclerotinia sclerotiorum 1980 UF-70] Length = 297 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 104/272 (38%), Gaps = 56/272 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S + VD IP N+ SI L ++A + + A ++ +T+V Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHSIGLVWWMLAREVL-----RLRGSIASREAEWDTMVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 + EE+ + E + G + + Sbjct: 204 LYFYRDPEAEENKDAIEEAKAPGADEVGAAAV 235 >gi|269969623|sp|C0NKW7|RSSA_AJECG RecName: Full=40S ribosomal protein S0 gi|225560226|gb|EEH08508.1| 40S ribosomal protein S0 [Ajellomyces capsulatus G186AR] Length = 296 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AVDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDHQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L ++A + Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLR 186 >gi|224123978|ref|XP_002319211.1| predicted protein [Populus trichocarpa] gi|222857587|gb|EEE95134.1| predicted protein [Populus trichocarpa] Length = 229 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 42/226 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M L I++LL + G R + K+ Y + RN IID +T+ L+ A IS Sbjct: 1 MTLHSIIIQKLLTTNAHIGRRVAAHHLKI--YTYGMRNQISIIDSDKTLICLRNAASFIS 58 Query: 61 DTVA-RGGRILFVATKSQASDCVMEAAKRSAQYCV--NSKW-LGGMMTNWKTVSQSIQKL 116 + R +FV T + V + K+ Y N W +GG +TN + + + Sbjct: 59 HLARDKNARFMFVNTNLLFDEIVEQMTKKMGIYSPRDNIMWRMGGFLTNSHSPKKFRSRN 118 Query: 117 RDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQE 176 + + I+ PD + V+DT R+ I E Sbjct: 119 KKVC----------------------------FGPIQP----PDCVVVLDTERKSSVILE 146 Query: 177 ARRLRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLVA 219 A RL++PIVA+VD+N + + Y +P ND S + + LFC+++ Sbjct: 147 ADRLQVPIVALVDSNMPWEIYKKIAYPVPAND-SVQFVYLFCNIIT 191 >gi|328479946|gb|EGF48997.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus MTCC 5462] Length = 74 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 47/74 (63%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM+ YIF ERN +IIDL +TV M+ A + + Sbjct: 1 MAVLSMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKMIDDAYNFVKEE 60 Query: 63 VARGGRILFVATKS 76 GG LFV TK Sbjct: 61 AQNGGVFLFVGTKK 74 >gi|296040610|gb|ADG85273.1| ribosomal protein S2 [Silene paradoxa] Length = 90 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 54/90 (60%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+ V FGH WNP+M YI + HII+L++T L +A ++ D +RG + L Sbjct: 1 MEARVHFGHGIRKWNPRMSPYISAKCKGMHIINLTRTARFLSEACDLVFDAASRGKQFLI 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK+ A+D V AA R+ + VN KWLGG Sbjct: 61 VGTKNIAADLVAWAAIRARCHYVNKKWLGG 90 >gi|153820504|ref|ZP_01973171.1| ribosomal protein S2 [Vibrio cholerae NCTC 8457] gi|126508951|gb|EAZ71545.1| ribosomal protein S2 [Vibrio cholerae NCTC 8457] Length = 107 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 70/105 (66%) Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 R+ +KL+++L GI+DMGGLPD +FV+D + E +AI+EA L IP+ AVVDTNS+PD Sbjct: 1 MRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVDTNSSPDG 60 Query: 197 VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 VDY+IPGNDD+ R++ L+ + A A +G + + + Sbjct: 61 VDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKDVAAVAEKDGFVE 105 >gi|325090239|gb|EGC43549.1| 40S ribosomal protein S0 [Ajellomyces capsulatus H88] Length = 296 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKVVLAARIIA-AVDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDHQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L ++A + Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLR 186 >gi|224136432|ref|XP_002322328.1| predicted protein [Populus trichocarpa] gi|118481301|gb|ABK92594.1| unknown [Populus trichocarpa] gi|222869324|gb|EEF06455.1| predicted protein [Populus trichocarpa] Length = 312 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N N +MERY+F RN +II+L +T L A +VI Sbjct: 17 LSQKEADIQMMLAAEVHLGTKN--CNFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVI 74 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN Sbjct: 75 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTN-------------- 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L+ + P L+ + D + I+EA Sbjct: 120 ------------------------QLQTSF-------SEPRLLILTDPRTDHQPIKEAAL 148 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 149 GNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQ 193 >gi|326518444|dbj|BAJ88251.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 281 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 49/215 (22%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 LL S G +N N +ME YI+ +R + +IID+ +T + A ++++ T+ + Sbjct: 20 LLSSQSHIGSKNV--NVQMEPYIYKKRSDGVNIIDIGKTYAKIVLAARILA-TIENPNDV 76 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 77 CVISARPYGHRAVLKYAGFTGAQAIAGRFTPGSFTNYIT-----RSFKE----------- 120 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 P L+ V D + AI+EA + IP++A+ D Sbjct: 121 -----------------------------PRLIIVTDPRVDHQAIREAAYVNIPVIALCD 151 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 T+++ VD IP N+ S SI L L+ + Sbjct: 152 TDASLKFVDVAIPCNNKSRHSIGLIWYLLCREVLR 186 >gi|294882863|ref|XP_002769858.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] gi|239873671|gb|EER02576.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] Length = 282 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 52/250 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+++L G + +M+RY+F ++ +II+L +T L A +V+ T+ Sbjct: 20 IQKMLVCSTHLG--TRNLDYRMKRYVFKRNKDGINIINLGKTWEKLMAAARVMV-TIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ V+ + S V++ A V +W G +TN T K + Sbjct: 77 KDIMVVSQRPYGSRAVLKLANFIGATAVAGRWTPGSLTNQITP-----KFTE-------- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA IP++A Sbjct: 124 --------------------------------PRLLIVTDPRTDSQAIKEAAYANIPVIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ SIAL L+A + + R G + + ++ Sbjct: 152 LCDTDSPLDFVDIAIPCNNKGKESIALLYYLLAREVL--MLRGKIPRGVEWEVMVDSFFW 209 Query: 247 SK-EGMQLEE 255 E ++ +E Sbjct: 210 RDPEEIERQE 219 >gi|325179525|emb|CCA13922.1| 40S ribosomal protein SA putative [Albugo laibachii Nc14] Length = 279 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 105/274 (38%), Gaps = 52/274 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + G + +ME Y++ R + HII++++T +Q A +VI T+ Sbjct: 9 IKMMLAAQTHIG--TRNADSRMEEYLWSRRIDGVHIINIAKTWEKIQLAARVIV-TIENP 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A+ + ++ G TN T ++ R+ Sbjct: 66 ADVIAISARPYGQRAVLKFAQYIGCASIAGRFTPGTFTNQIT-----KQFRE-------- 112 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + DT + A++E+ + +P++A Sbjct: 113 --------------------------------PRLLIITDTRTDSQAVRESASVNVPVIA 140 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 D++S VD IP N+ SI L L+A + + + S + + Sbjct: 141 FCDSDSPLQYVDVAIPANNKGKASIGLLYWLLAREVLR-LRGKVSRAVPWNVAVDLFLYR 199 Query: 247 SKEGMQLEEDSQ--SSESSVLDGQEVAVVPELMS 278 E ++ E++Q + E VPE + Sbjct: 200 DPEELKKAEEAQAIAPEEVPAQSSWSEAVPEATA 233 >gi|242781968|ref|XP_002479907.1| 40S ribosomal protein S0 [Talaromyces stipitatus ATCC 10500] gi|269969662|sp|B8M6L1|RSSA_TALSN RecName: Full=40S ribosomal protein S0 gi|218720054|gb|EED19473.1| 40S ribosomal protein S0 [Talaromyces stipitatus ATCC 10500] Length = 290 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 104/274 (37%), Gaps = 56/274 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADVAVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S + VD IP N+ +I L L+A + + A ++ + VV Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVL-----RLRGTLATRETEWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE + ++ S + G E + + Sbjct: 204 LYFYRDPEAEETKEIADESKVPGAEEVGPAAIET 237 >gi|311334528|emb|CBN08645.1| small nucleolar RNA, H/ACA box 62 [Microcosmus squamiger] Length = 277 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 87/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G N + +ME+YI+ R + +II+L +T LQ A + I Sbjct: 8 LSLKEEDVSKMLAATTHIGSTN--CDFQMEQYIYKTRSDGVYIINLKKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I +++K V++ A + + ++ G TN Sbjct: 66 V-AIENPADICVISSKQYGQRAVLKFASATGATAIAGRYTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I+E+ Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRTDHQPIRESAY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ + SI L L+A + Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKAKHSIGLLWWLLAREVLR 184 >gi|212526852|ref|XP_002143583.1| 40S ribosomal protein S0 [Penicillium marneffei ATCC 18224] gi|269969658|sp|B6Q3G2|RSSA_PENMQ RecName: Full=40S ribosomal protein S0 gi|210072981|gb|EEA27068.1| 40S ribosomal protein S0 [Penicillium marneffei ATCC 18224] Length = 290 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 104/274 (37%), Gaps = 56/274 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADVAVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S + VD IP N+ +I L L+A + + A ++ + VV Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVL-----RLRGTLATRETEWDVVVD 203 Query: 247 S--KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + EE + ++ + + G E + S Sbjct: 204 LYFYRDPEAEETKEIADETKVAGAEEVGPAAIES 237 >gi|119186907|ref|XP_001244060.1| conserved hypothetical protein [Coccidioides immitis RS] gi|303317428|ref|XP_003068716.1| 40S ribosomal protein S0, putative [Coccidioides posadasii C735 delta SOWgp] gi|121937249|sp|Q1E1R2|RSSA_COCIM RecName: Full=40S ribosomal protein S0 gi|269969648|sp|C5PA09|RSSA_COCP7 RecName: Full=40S ribosomal protein S0 gi|240108397|gb|EER26571.1| 40S ribosomal protein S0, putative [Coccidioides posadasii C735 delta SOWgp] gi|320038679|gb|EFW20614.1| 40S ribosomal protein S0 [Coccidioides posadasii str. Silveira] Length = 291 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L L+A + Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVLR 186 >gi|294940508|ref|XP_002782805.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] gi|239894810|gb|EER14601.1| 40S ribosomal protein S0-B, putative [Perkinsus marinus ATCC 50983] Length = 274 Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 52/250 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+++L G + +M+RY+F ++ +II+L +T L A +V+ T+ Sbjct: 21 IQKMLVCSTHLG--TRNLDYRMKRYVFKRNKDGINIINLGKTWEKLMAAARVMV-TIENP 77 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ V+ + S V++ A V +W G +TN T K + Sbjct: 78 KDIMVVSQRPYGSRAVLKLANFIGATAVAGRWTPGSLTNQITP-----KFTE-------- 124 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA IP++A Sbjct: 125 --------------------------------PRLLIVTDPRTDSQAIKEAAYANIPVIA 152 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S D VD IP N+ SIAL L+A + + R G + + ++ Sbjct: 153 LCDTDSPLDFVDIAIPCNNKGKESIALLYYLLAREVL--MLRGKIPRGVEWEVMVDSFFW 210 Query: 247 SK-EGMQLEE 255 E ++ +E Sbjct: 211 RDPEEIERQE 220 >gi|9944891|gb|AAG03028.1|AF273104_1 ribosomal protein S2 [Zea mays] Length = 416 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 51/259 (19%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LL + G R + ++ YI C RN I+D +T+ L+ AL + + + R Sbjct: 12 KLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRF 69 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 F+ TK+ + AK + C+N S+W +G TN Sbjct: 70 FFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY-------------------- 105 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KK R + L PD + ++ +R+ I EA R +IPIV++ Sbjct: 106 -ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEADRSQIPIVSL 154 Query: 188 VDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--------QHSYMGAD 236 VD+ L ++Y IP ND R + LFC+L+ I R + Sbjct: 155 VDSTIPWKLDKRINYSIPANDP-MRLVYLFCNLITKTVILERKRITAKNRTPRSHLSSCT 213 Query: 237 TKSAGETVVHSKEGMQLEE 255 KSA ++HS+E E Sbjct: 214 EKSAAGIIIHSREVSSWAE 232 >gi|118481101|gb|ABK92504.1| unknown [Populus trichocarpa] Length = 310 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY+F RN +II+L +T L A +VI Sbjct: 16 LSQKELDIQMMLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVI 73 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN S S Sbjct: 74 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFSE------ 126 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I EA Sbjct: 127 ---------------------------------------PRLLILTDPRTDHQPIMEAAL 147 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 148 GNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQ 192 >gi|269969656|sp|C0S3U2|RSSA_PARBP RecName: Full=40S ribosomal protein S0 gi|225681813|gb|EEH20097.1| 40S ribosomal protein SA [Paracoccidioides brasiliensis Pb03] Length = 295 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L ++A + Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLR 186 >gi|269969655|sp|C1G1P4|RSSA_PARBD RecName: Full=40S ribosomal protein S0 gi|226288983|gb|EEH44495.1| 40S ribosomal protein S0 [Paracoccidioides brasiliensis Pb18] Length = 295 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L ++A + Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLR 186 >gi|295671352|ref|XP_002796223.1| 40S ribosomal protein S0 [Paracoccidioides brasiliensis Pb01] gi|269969654|sp|C1GUB6|RSSA_PARBA RecName: Full=40S ribosomal protein S0 gi|226284356|gb|EEH39922.1| 40S ribosomal protein S0 [Paracoccidioides brasiliensis Pb01] Length = 295 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MEPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L ++A + Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLR 186 >gi|315303465|ref|ZP_07874055.1| ribosomal protein S2 [Listeria ivanovii FSL F6-596] gi|313628166|gb|EFR96709.1| ribosomal protein S2 [Listeria ivanovii FSL F6-596] Length = 115 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 43/88 (48%), Positives = 67/88 (76%) Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 ++++++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ +VDTN +PD Sbjct: 2 VLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDE 61 Query: 197 VDYVIPGNDDSSRSIALFCDLVASAAID 224 +DYVIP NDD+ R++ L +A A I+ Sbjct: 62 IDYVIPANDDAIRAVKLLTAKMADAIIE 89 >gi|145233361|ref|XP_001400053.1| 40S ribosomal protein S0 [Aspergillus niger CBS 513.88] gi|229891580|sp|A2QE32|RSSA_ASPNC RecName: Full=40S ribosomal protein S0 gi|134056981|emb|CAK44328.1| unnamed protein product [Aspergillus niger] Length = 298 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQSH--MEPYLWKTRPDGVNVINIGKTWEKILLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S D VD IP N+ +I L L+A + Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVLR 186 >gi|302412989|ref|XP_003004327.1| 40S ribosomal protein S0 [Verticillium albo-atrum VaMs.102] gi|261356903|gb|EEY19331.1| 40S ribosomal protein S0 [Verticillium albo-atrum VaMs.102] Length = 288 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 101/278 (36%), Gaps = 60/278 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQAHIGSKNMQVH--MEPYLWKTRQDGVNVINVGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAHHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIREASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-----------A 235 + DT+S + VD IP N+ SI L ++A + ++ Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTIYNRETPWEVMTDLYFYR 208 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVV 273 D ++ E V ++ + EE++ + + Sbjct: 209 DPEAEAEDKVEDEKVVGAEEEAPEATNDEWAAAPAGFT 246 >gi|71022107|ref|XP_761284.1| hypothetical protein UM05137.1 [Ustilago maydis 521] gi|74700003|sp|Q4P426|RSSA_USTMA RecName: Full=40S ribosomal protein S0 gi|46097778|gb|EAK83011.1| hypothetical protein UM05137.1 [Ustilago maydis 521] Length = 276 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + +M YI+ R + H++++ +T + A ++++ + Sbjct: 15 ISLLLAAQTHIGTKNA--DKQMAPYIYKRRADGIHLLNIGKTWEKIVFAARILA-AIENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A ++ + ++ G TN+ T + ++ Sbjct: 72 ADICVISGRQYGHRAVLKFAAQTGATAIAGRFTPGSFTNYIT-----RSFKE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D + AI+EA + IP ++ Sbjct: 119 --------------------------------PRVIVVTDPRVDHQAIREASYVNIPCIS 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VD++S VD IPGN S+ L L+ + Sbjct: 147 FVDSDSPLKFVDVAIPGNVRGRHSVGLLWWLLCRTVLR 184 >gi|321262430|ref|XP_003195934.1| 40S ribosomal protein S0 [Cryptococcus gattii WM276] gi|317462408|gb|ADV24147.1| 40S ribosomal protein S0, putative [Cryptococcus gattii WM276] Length = 292 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N + ME Y++ R + H+I++ +T L A +V++ T+ Sbjct: 17 IQLLLAAQCHLGTKN--CDKTMENYVWKRRADGIHVINVGKTWEKLVLAARVLA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ + + ++ G TN+ T + ++ Sbjct: 74 NDVCVISARPYGHRAVLKYGSFTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRVIIVTDPRVDHQAIREAAYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+++ VD IP N+ S S+ L L+ + Sbjct: 149 FCDTDASTKFVDIAIPTNNKSRHSVGLMWYLLCREVLR 186 >gi|258563562|ref|XP_002582526.1| 40S ribosomal protein S0 [Uncinocarpus reesii 1704] gi|269969663|sp|C4JYP8|RSSA_UNCRE RecName: Full=40S ribosomal protein S0 gi|237908033|gb|EEP82434.1| 40S ribosomal protein S0 [Uncinocarpus reesii 1704] Length = 297 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + LL + G +N + M+ Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 MEMLLAAQCHLGSKNLQVH--MDPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L L+A + Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHAIGLVWWLLAREVLR 186 >gi|223997552|ref|XP_002288449.1| 40S ribosomal protein-like protein [Thalassiosira pseudonana CCMP1335] gi|220975557|gb|EED93885.1| 40S ribosomal protein-like protein [Thalassiosira pseudonana CCMP1335] Length = 243 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 97/259 (37%), Gaps = 51/259 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L +GV G RN + ME YI+ R HI+++ +T + A +VI + Sbjct: 18 IQMMLSAGVHTGTRNS--DSSMEEYIWRRRKDGLHILNIGKTWEKIMLAARVIV-AIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A + + ++ G TN T ++ R+ Sbjct: 75 EDVVAISARPWGMRAVLKFAHYTGAQSIAGRFTPGTFTNQIT-----KQFRE-------- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + A++E+ + IP++A Sbjct: 122 --------------------------------PRLLIVTDPRTDSQAVRESSYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKSAGETV 244 D++S VD IP N+ SI L L+A + G + S Sbjct: 150 FCDSDSPLQFVDIAIPANNKGKHSIGLIYWLLAREVLRLRGSVSRTSDWDVPVDLFFHRD 209 Query: 245 VHSKEGMQLEEDSQSSESS 263 + + + E ++ E++ Sbjct: 210 IEELKKTEEEAAAKVDEAA 228 >gi|116199947|ref|XP_001225785.1| 40S ribosomal protein S0 [Chaetomium globosum CBS 148.51] gi|121937800|sp|Q2GV75|RSSA_CHAGB RecName: Full=40S ribosomal protein S0 gi|88179408|gb|EAQ86876.1| 40S ribosomal protein S0 [Chaetomium globosum CBS 148.51] Length = 293 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 86/218 (39%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N N M+ Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHVGSKNLGVN--MQPYLWKTRADGVNVINIGKTWEKITLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 SDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDSQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ SI L ++A + Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLR 186 >gi|255018369|ref|ZP_05290495.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL F2-515] Length = 110 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 43/84 (51%), Positives = 64/84 (76%) Query: 141 KRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYV 200 +++KL+R L GI+DM GLPD +F+VD +E++A+ EAR+L IPI+ +VDTN +PD +DYV Sbjct: 1 EQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYV 60 Query: 201 IPGNDDSSRSIALFCDLVASAAID 224 IP NDD+ R++ L +A A I+ Sbjct: 61 IPANDDAIRAVKLLTAKMADAIIE 84 >gi|310795693|gb|EFQ31154.1| ribosomal protein S2 [Glomerella graminicola M1.001] Length = 294 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEMLLAAQAHLGSKNLQVH--MEPYLWKTRADGVNVINVGKTWEKIVLAARIIA-AVDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ SI L ++A + Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHSIGLIWWMLAREVLR 186 >gi|91089051|ref|XP_970069.1| PREDICTED: similar to ribosome-associated protein P40 [Tribolium castaneum] gi|270012401|gb|EFA08849.1| hypothetical protein TcasGA2_TC006550 [Tribolium castaneum] Length = 302 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L +G G + +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDVTKMLAAGTHVG--TTNVDFQMEQYVYKRRADGIHIINLRKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIEHPSEVFVISSRPYGQRAVLKFAAHTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPAYDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ T+S VD IPGN+ S+ SI L L+A + Sbjct: 140 VNIPVIALCITDSPLRFVDIAIPGNNKSAHSIGLMWWLLAREVLR 184 >gi|78191420|gb|ABB29931.1| P40-like protein [Solanum tuberosum] Length = 300 Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 93/273 (34%), Gaps = 49/273 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 + + I+ +L + V G +N + +MERY+F RN +II+ +T L A +VI Sbjct: 11 LTTKEADIQLMLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINAGKTWDKLHMAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 I+ + + V++ A+ + + + + G TN S S +L Sbjct: 69 VSI-ENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYSEPRL--- 124 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + D + I+EA Sbjct: 125 ------------------------------------------LILTDPRTDHQPIKEAAL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP +A DT+S VD IP N+ SI + ++A + + D Sbjct: 143 GNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGVLFWILARMVLQMRGTISAGPKWDVMV 202 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 +E +E+ + + + A+ Sbjct: 203 DLFFYREPEEAKDQQEEEVPAIADYAEYGGAAL 235 >gi|326504366|dbj|BAJ91015.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 281 Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL++ G KM Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 ISLLLQAQAHIG--AKSVEKKMAPYVWKRRADGVNVINVGKTWEKIVLAARIIA-AIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 74 NDVCVISSRPYGHRAVLKFAANTGAQAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRVDHQAIREASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S VD IP N+ S S+ L L+ + Sbjct: 149 IADTDSPLSYVDVAIPANNKSKHSVGLIWWLLCREVLR 186 >gi|19112932|ref|NP_596140.1| 40S ribosomal protein S0A (p40) [Schizosaccharomyces pombe 972h-] gi|15214296|sp|Q9Y7L8|RSSA1_SCHPO RecName: Full=40S ribosomal protein S0-A gi|4538669|emb|CAB39363.1| 40S ribosomal protein S0A (p40) [Schizosaccharomyces pombe] Length = 292 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N +M+ Y++ R + HI++L +T L A +VI+ T+ Sbjct: 17 IKQLLAANCHIGSKNLEV--RMDNYVWKRRSDGVHILNLGKTWEKLVLAARVIA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+T++ V++ A + + ++ G TN+ T Sbjct: 74 ADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT------------------ 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 T +E P L+ V D + AI+EA + IP++A Sbjct: 116 ---RTYRE------------------------PRLIVVTDPRADAQAIKEASFVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +SI L L+A + Sbjct: 149 LCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLR 186 >gi|312372056|gb|EFR20103.1| hypothetical protein AND_20652 [Anopheles darlingi] Length = 418 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 57/123 (46%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 FT+ L ++ V GH+ N M+ Y++ R +IDL +T L+ AL + + R Sbjct: 210 FTVEDLFKARVHLGHKEGTLNDNMKGYLYGSRLGHCVIDLDKTAEHLRMALNIAAHIAFR 269 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILF + + V + AK +Y W GG+ TN K ++ +L DL N Sbjct: 270 DGIILFFNRNALNAHQVEKTAKECGEYAHTRYWRGGVFTNAKVQFGAVTRLPDLCIFFNT 329 Query: 126 ENQ 128 N Sbjct: 330 MNN 332 >gi|56754323|gb|AAW25349.1| SJCHGC05092 protein [Schistosoma japonicum] Length = 200 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 57/123 (46%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ L ++ V GHR+ L N M+ YIF R IIDL QT +L AL + R Sbjct: 56 VSVTDLFQARVHMGHRSVLRNDYMKPYIFGCRQGIDIIDLDQTCSLLFDALNFTAHIAYR 115 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 G ILFV Q V A+ +Y KW GG+ TN V +L DL LL+ Sbjct: 116 QGIILFVYQNKQMLPLVERTAENVGEYSYCRKWEGGVFTNSSDVFHDSVRLPDLVLLLST 175 Query: 126 ENQ 128 N Sbjct: 176 CNS 178 >gi|296417633|ref|XP_002838457.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634396|emb|CAZ82648.1| unnamed protein product [Tuber melanosporum] Length = 288 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 102/266 (38%), Gaps = 52/266 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + M+ Y++ R + +II++ +T + A ++I+ T+ Sbjct: 16 IEMLLAAQAHIGAKNLQVH--MDPYVWKTRPDGVNIINIGKTWEKIVLAARIIA-TIDNP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+ +S V++ A + + ++ G TN+ T + ++ Sbjct: 73 ADVCAVSARSFGQRAVLKFATHTGATAIAGRFTPGNFTNYIT-----RSFKE-------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 120 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT+S + VD VIP N+ +I L ++A + + D + ++ Sbjct: 148 LCDTDSPTEFVDVVIPTNNKGRHAIGLIWWMLAR---EVRRLRGIIPSRDAEWDVMVDLY 204 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAV 272 + EE E+ + G E V Sbjct: 205 FYRDPEAEEQKAVEEADKVPGAEEVV 230 >gi|162952033|ref|NP_001106143.1| 40S ribosomal protein SA [Bombyx mori] gi|74904851|sp|Q5UAP4|RSSA_BOMMO RecName: Full=40S ribosomal protein SA gi|54609281|gb|AAV34856.1| ribosomal protein SA [Bombyx mori] Length = 306 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 104/277 (37%), Gaps = 55/277 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLGAENV--NFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V+D ++ I EA Sbjct: 112 --------------------------------IQAAFREPRLLIVLDPAQDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT 237 + IP++A+ +T+S VD IP N SS SI L L+A + G+ + Sbjct: 140 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDV-- 197 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 E + +++ Q+ E +V+ + V P Sbjct: 198 --VVELFFYRDPEESEKDEQQAKEQAVVPAKPEVVAP 232 >gi|224115486|ref|XP_002332146.1| predicted protein [Populus trichocarpa] gi|222875196|gb|EEF12327.1| predicted protein [Populus trichocarpa] Length = 281 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 93/274 (33%), Gaps = 55/274 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N N +MERY+F RN +II+L +T L A +VI Sbjct: 14 LSQKEADIQMMLAAEVHLGTKN--CNFQMERYVFKRRNDGIYIINLGKTWDKLLLAARVI 71 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + G TN + Sbjct: 72 V-AIENPQDIIVQSARPYGQRAVLKFAQCTGANAIAGRHTPGTFTNQLQTTFCE------ 124 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+EA Sbjct: 125 ---------------------------------------PRLLVLTDPRTDHQPIKEAAL 145 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP +A DT+S VD IP N+ SI L+A + Sbjct: 146 GNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVL------QMRGTIRPGH 199 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVV 273 + +V + EE E V+ + A+ Sbjct: 200 KWDMMVDLFFYREPEETKPQEEEDVVAPVDYALT 233 >gi|164660494|ref|XP_001731370.1| hypothetical protein MGL_1553 [Malassezia globosa CBS 7966] gi|229891592|sp|A8PXY6|RSSA_MALGO RecName: Full=40S ribosomal protein S0 gi|159105270|gb|EDP44156.1| hypothetical protein MGL_1553 [Malassezia globosa CBS 7966] Length = 290 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 49/214 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N M Y+ R + H+I++ +T L A +V++ V Sbjct: 16 ISLLLAAQTHIGTKN--CEKAMLPYVHKRRADGIHLINIGKTWEKLVFAARVLA-AVENP 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I +++++ V + A + + ++ G TN+ T + ++ Sbjct: 73 ADICVISSRTYGHRAVHKFAANTGATAIAGRFTPGSFTNYIT-----RSFKE-------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D + AI+E+ + IP++A Sbjct: 120 --------------------------------PRVIVVTDPRVDHQAIRESAYVNIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT++ VD IPGN+ SI L L+ Sbjct: 148 LCDTDAPLRHVDIAIPGNNKGRHSIGLLWWLLCR 181 >gi|169617724|ref|XP_001802276.1| hypothetical protein SNOG_12043 [Phaeosphaeria nodorum SN15] gi|160703469|gb|EAT80455.2| hypothetical protein SNOG_12043 [Phaeosphaeria nodorum SN15] Length = 357 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 99/278 (35%), Gaps = 57/278 (20%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 T+ LL S GH LWNP RYI R HII L T L+++ +V+ + Sbjct: 111 ADVTLELLLASEAHQGHVTSLWNPANARYIHGIRQGIHIISLEVTAAHLRRSAKVVQEVC 170 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 RGG +LFV T+ V AA+ + Y + +W+ G +TN + + + +++ Sbjct: 171 RRGGMVLFVGTRDGQDRAVARAAELAKGYHLFERWIPGSITNGQQILGRCK-----TKVV 225 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 N+ ++ E R + PDL+ ++ + + + R Sbjct: 226 NELDEEVPGFEEQLFNRSVLR--------------PDLVVCMNPLENYVLLHDHRC---- 267 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM---GADTKSA 240 I + ++ A G + + A Sbjct: 268 ---------------------------IQVIAGVLGRAGEAGQKLRLAAAKRGSITYSPA 300 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 + V+ E +EDS S E+ + A EL + Sbjct: 301 RDLVMPGTE----DEDSTSIEAPTGRLGDNANTDELEA 334 >gi|298705166|emb|CBJ28597.1| conserved unknown protein [Ectocarpus siliculosus] Length = 350 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I ++L + V G RN + +M+ YI+ R + HI+++ +T L A ++I + Sbjct: 17 IHKMLAAQVHIGTRNS--DSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIV-AIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ ++ + V++ A+ + + ++ G TN T ++ R+ Sbjct: 74 QDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQIT-----KQFRE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + A++EA + +P++A Sbjct: 121 --------------------------------PRLLIITDPRPDAQAVKEASYVNVPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D++S VD IP N+ SI L L+A + Sbjct: 149 FCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLR 186 >gi|116334922|ref|YP_802417.1| ribosomal protein S2 [Candidatus Carsonella ruddii PV] gi|122940485|sp|Q05FX0|RS2_CARRP RecName: Full=30S ribosomal protein S2 gi|116235203|dbj|BAF35051.1| ribosomal protein S2 [Candidatus Carsonella ruddii PV] Length = 216 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 112/211 (53%), Gaps = 2/211 (0%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I L+ S + G+ N M++YI NN +I DL + + + + I + Sbjct: 3 IIHLINSDIFIGNNKKFLNFSMKKYIIFTINNLNIFDLKKIIISVLLLKKYIKFIYKKKM 62 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +ILF+ TK+ + + + ++ Q V +KW+ G +TN + + I + + Sbjct: 63 KILFIGTKNFFRELIYKFSRSIRQPFVCNKWISGSLTNLQNYKKMIN--KLKIIRKKIKF 120 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + +TKKE+++ +K K++ G R++ P L+ + D N++K+ + EA+RL+I I + Sbjct: 121 KSYTKKEKISFLKKEKKIEILFGGFRNLKKTPKLIIISDINKDKIIVNEAKRLKIKIASF 180 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +D++ N +D+++P N++S SI + +++ Sbjct: 181 LDSSDNCSKIDFILPCNNNSINSIKIILNIL 211 >gi|224119552|ref|XP_002331189.1| predicted protein [Populus trichocarpa] gi|222873310|gb|EEF10441.1| predicted protein [Populus trichocarpa] Length = 198 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY+F RN +II+L +T L A +VI Sbjct: 7 LSQKELDIQMMLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINLGKTWEKLLLAARVI 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN S S Sbjct: 65 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFSE------ 117 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I EA Sbjct: 118 ---------------------------------------PRLLILTDPRTDHQPIMEAAL 138 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 139 GNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQ 183 >gi|323451948|gb|EGB07823.1| hypothetical protein AURANDRAFT_4875 [Aureococcus anophagefferens] Length = 219 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 100/265 (37%), Gaps = 55/265 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +A + I+++L + G RN + ME YI+ R + HII++ +T L A +V+ Sbjct: 2 LAPKEEDIQKMLSAQCHIGTRNS--DHMMEEYIWRRRQDGIHIINVGKTWEKLMLAARVL 59 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + I+ ++ + V++ A+ + + ++ G TN T ++ ++ Sbjct: 60 T-AIENPQDIIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQIT-----KQFKE- 112 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ + D + A++EA Sbjct: 113 ---------------------------------------PRILVITDPRTDSQAVKEASY 133 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADT 237 + +P++A D++S VD IP N+ SI L L+A + G +H+ Sbjct: 134 VNLPVIAFCDSDSPCQHVDVAIPSNNKGKLSIGLLYWLLAREMLRMRGTVARHAPWDVPV 193 Query: 238 K----SAGETVVHSKEGMQLEEDSQ 258 E + + E + + Sbjct: 194 DLFFYRDPEELEKADEAQAFAAEQE 218 >gi|92429566|gb|ABD93527.2| mitochondrial small ribosomal subunit protein [Capsicum annuum] Length = 174 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 38/208 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + G R + K+ Y RN IID +T+ L+ A I + V Sbjct: 2 IQKLLSTNAHLGRRVAAHHFKI--YSHGSRNAMTIIDSDKTLICLRNACSFIGELVRHKA 59 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R +FV T + D + + K S LGG +TN + + + + L Sbjct: 60 RFIFVNTNTLFDDIIDQMTKTIGCRNDTSWRLGGFLTNSSSPRKFRGRNKKL-------- 111 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 L I+ PD + + DT R+ IQEA +L+IPIV + Sbjct: 112 --------------------NLTAIQP----PDCVVIFDTARKSSVIQEAAKLQIPIVGL 147 Query: 188 VDTNSNPD---LVDYVIPGNDDSSRSIA 212 VD++ D + Y IP ND S + + Sbjct: 148 VDSSMPWDIYKKITYPIPAND-SVQFVY 174 >gi|315115409|gb|ADT80677.1| ribosomal protein SA [Euphydryas aurinia] Length = 306 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 102/277 (36%), Gaps = 55/277 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLGSENV--NFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V+D ++ I EA Sbjct: 112 --------------------------------IQAAFREPRLLIVLDPAQDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT 237 + IP++A +T+S VD IP N SS SI L L+A + G+ + Sbjct: 140 VNIPVIAFCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDV-- 197 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 + + +E+ Q+ E +V+ + P Sbjct: 198 --VVDLFFYRDPEESEKEEQQAKEQAVVAAKPEVAAP 232 >gi|217072304|gb|ACJ84512.1| unknown [Medicago truncatula] Length = 299 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY F RN +II+L +T LQ A +VI Sbjct: 11 LSQKEADIQMMLAADVHLGTKN--CDFQMERYCFKRRNDGIYIINLGKTWEKLQLAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + G TN VS S Sbjct: 69 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQVSFSE------ 121 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+EA Sbjct: 122 ---------------------------------------PRLLILTDPRTDHQPIKEAAL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 143 GNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 187 >gi|255639911|gb|ACU20248.1| unknown [Glycine max] Length = 313 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 87/252 (34%), Gaps = 49/252 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY+F R + +II+L +T LQ A ++I + Sbjct: 21 IQMMLAADVHLGTKN--CDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIV-AIENP 77 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN S + Sbjct: 78 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQQSYNE------------- 124 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IP +A Sbjct: 125 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 152 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 DT+S VD IP N+ SI L+A + D Sbjct: 153 FCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 212 Query: 247 SKEGMQLEEDSQ 258 +E Q EED Sbjct: 213 PEEAKQQEEDEA 224 >gi|255640969|gb|ACU20764.1| unknown [Glycine max] Length = 311 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 86/252 (34%), Gaps = 49/252 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY+F R + +II+L +T LQ A ++I + Sbjct: 21 IQMMLAADVHLGTKN--CDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIV-AIENP 77 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN S + Sbjct: 78 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQQSYNE------------- 124 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P + + D + I+E IP +A Sbjct: 125 --------------------------------PRRLILTDPRTDHQPIKEGALGNIPTIA 152 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 DT+S VD IP N+ SI L+A + D Sbjct: 153 FCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRE 212 Query: 247 SKEGMQLEEDSQ 258 +E Q EED Sbjct: 213 PEEAKQQEEDEA 224 >gi|126133949|ref|XP_001383499.1| ribosomal protein S0A [Scheffersomyces stipitis CBS 6054] gi|229891604|sp|A3LRZ0|RSSA_PICST RecName: Full=40S ribosomal protein S0 gi|126095648|gb|ABN65470.1| ribosomal protein S0A [Scheffersomyces stipitis CBS 6054] Length = 261 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 105/288 (36%), Gaps = 67/288 (23%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + K Y++ R + ++I++ +T + A ++I+ V Sbjct: 15 KLLLAANVHLGSKNVQVHNK--PYVYKTRPDGVNVINIGKTWEKIVLAARIIA-AVPNPS 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVVVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIA----------------RQ 229 D +S + VD IP N+ SI L L+A + GI R Sbjct: 147 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLRLRGIIPDRTTEWSVMPDLYFYRD 206 Query: 230 HSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + + +T +E ++ D + E+ +D E P + Sbjct: 207 PEEIEQNAAEEAKTTEDVEEAAPVDADEWTGETEEVDWAESGATPAVE 254 >gi|70948671|ref|XP_743816.1| 40S ribosomal protein [Plasmodium chabaudi chabaudi] gi|74978944|sp|Q4XZN2|RSSA_PLACH RecName: Full=40S ribosomal protein SA gi|56523498|emb|CAH77628.1| 40S ribosomal protein, putative [Plasmodium chabaudi chabaudi] Length = 263 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 49/220 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I ++L V G +N KM+RY++ ++ HII+L++T LQ A +VI V Sbjct: 11 EESIAKMLICKVHIGTKN--LENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIV-AV 67 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + ++ V+ + S V++ A+ + + +W GM+TN Q IQK + Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKFIE----- 117 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 P L+ V D + +++E+ IP Sbjct: 118 -----------------------------------PRLLIVTDPRTDAQSVKESAYANIP 142 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++A+ D++S + VD IP N+ SIAL L+A + Sbjct: 143 VIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVL 182 >gi|8928330|sp|O80377|RSSA_DAUCA RecName: Full=40S ribosomal protein SA; AltName: Full=p40 gi|3551245|dbj|BAA32821.1| P40-like protein [Daucus carota] Length = 297 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 99/279 (35%), Gaps = 57/279 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ + + V G +N + +MERY+F RN +II+L +T L A +VI Sbjct: 15 IQMMCAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVSI-ENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 72 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+EA IP +A Sbjct: 111 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKEAALGNIPTIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADT-----KS 239 DT+S VD IP N+ SI L+A + G+ Q + Sbjct: 147 FCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFYRE 206 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEV-AVVPELM 277 ET +E + + + ++ + G + +P+ Sbjct: 207 PEETKDQEEEDLPVGDYVADYAAAPIGGADQWNAIPDAQ 245 >gi|82704653|ref|XP_726642.1| ribosomal protein S2 [Plasmodium yoelii yoelii str. 17XNL] gi|74922158|sp|Q7RBT0|RSSA_PLAYO RecName: Full=40S ribosomal protein SA gi|23482139|gb|EAA18207.1| ribosomal protein S2, putative [Plasmodium yoelii yoelii] Length = 263 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 49/220 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I ++L V G +N KM+RY++ ++ HII+L++T LQ A +VI V Sbjct: 11 EESIAKMLICKVHIGTKN--LENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIV-AV 67 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + ++ V+ + S V++ A+ + + +W GM+TN Q IQK + Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKFIE----- 117 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 P L+ V D + +++E+ IP Sbjct: 118 -----------------------------------PRLLIVTDPRTDAQSVKESAYANIP 142 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++A+ D++S + VD IP N+ SIAL L+A + Sbjct: 143 VIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVL 182 >gi|242050876|ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [Sorghum bicolor] gi|241926559|gb|EER99703.1| hypothetical protein SORBIDRAFT_02g039270 [Sorghum bicolor] Length = 306 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY++ R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +SI L+A + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 189 >gi|125559175|gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indica Group] Length = 305 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY++ R + +II+L +T LQ A +VI + Sbjct: 19 IQMMLAADVHLGTKN--CDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIV-AIENP 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 76 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 115 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +SI L+A + Sbjct: 151 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 188 >gi|115473357|ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] gi|313103629|pdb|3IZ6|A Chain A, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gi|33146943|dbj|BAC79991.1| putative 40S ribosomal protein [Oryza sativa Japonica Group] gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza sativa Japonica Group] gi|125601085|gb|EAZ40661.1| hypothetical protein OsJ_25132 [Oryza sativa Japonica Group] gi|215678910|dbj|BAG96340.1| unnamed protein product [Oryza sativa Japonica Group] gi|215734975|dbj|BAG95697.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740977|dbj|BAG97472.1| unnamed protein product [Oryza sativa Japonica Group] gi|215764959|dbj|BAG86656.1| unnamed protein product [Oryza sativa Japonica Group] Length = 305 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY++ R + +II+L +T LQ A +VI + Sbjct: 19 IQMMLAADVHLGTKN--CDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIV-AIENP 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 76 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 115 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +SI L+A + Sbjct: 151 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 188 >gi|68069781|ref|XP_676802.1| 40S ribosomal protein [Plasmodium berghei strain ANKA] gi|74993380|sp|Q4Z694|RSSA_PLABA RecName: Full=40S ribosomal protein SA gi|56496659|emb|CAH94104.1| 40S ribosomal protein, putative [Plasmodium berghei] Length = 263 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 49/220 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I ++L V G +N KM+RY++ ++ HII+L++T LQ A +VI V Sbjct: 11 EESIAKMLICKVHIGTKN--LENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIV-AV 67 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + ++ V+ + S V++ A+ + + +W GM+TN Q IQK + Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKFIE----- 117 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 P L+ V D + +++E+ IP Sbjct: 118 -----------------------------------PRLLIVTDPRTDAQSVKESAYANIP 142 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++A+ D++S + VD IP N+ SIAL L+A + Sbjct: 143 VIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVL 182 >gi|150406486|ref|YP_001315128.1| ribosomal protein S2 [Chlorokybus atmophyticus] gi|126507723|gb|ABO15120.1| ribosomal protein S2 [Chlorokybus atmophyticus] Length = 442 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 14/176 (7%) Query: 56 LQVISDTVARGG------RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTV 109 + I +T +G ILF T + + V AAK + Q +N+KWLGG++TNWK + Sbjct: 263 ARFIKETSNQGSYHEVVGHILFFNTNPEYNKIVRLAAKLTDQSYLNNKWLGGLLTNWKEI 322 Query: 110 SQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNR 169 + S+ + E+L + F ++ ++ R K+K++ +GI + P+L+ ++ N+ Sbjct: 323 NLSLGLFQKFEDL----YKSFLIRKNISFSR-YKKMKKSFEGISPLKKRPNLIIFLNPNQ 377 Query: 170 EKLAIQEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAA 222 ++ I+EA L IPI+A+VD+N+ P L + Y IPG S I F +LV Sbjct: 378 NEIPIREAFNLNIPIIALVDSNTPPRLLSQITYPIPGAQTSLPFIYFFLNLVVKTI 433 >gi|125542660|gb|EAY88799.1| hypothetical protein OsI_10272 [Oryza sativa Indica Group] Length = 305 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + ++ +L + V G +N + +MERY++ R + +II+L +T LQ A +VI Sbjct: 12 LSQAEQDVQMMLAADVHLGTKN--CDFQMERYVYKRRSDGIYIINLGKTWEKLQLAARVI 69 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN Sbjct: 70 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN-------------- 114 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L+ + P L+ + D + I+E+ Sbjct: 115 ------------------------QLQTSF-------SEPRLLILTDPRTDHQPIKESAL 143 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 144 GNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQ 188 >gi|108706531|gb|ABF94326.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] Length = 269 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + ++ +L + V G +N + +MERY++ R + +II+L +T LQ A +VI Sbjct: 12 LSQAEQDVQMMLAADVHLGTKN--CDFQMERYVYKRRSDGIYIINLGKTWEKLQLAARVI 69 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN Sbjct: 70 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN-------------- 114 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L+ + P L+ + D + I+E+ Sbjct: 115 ------------------------QLQTSF-------SEPRLLILTDPRTDHQPIKESAL 143 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 144 GNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQ 188 >gi|15217294|gb|AAK92638.1|AC079633_18 Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gi|108706530|gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gi|125585164|gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gi|213959144|gb|ACJ54906.1| 40S ribosomal protein [Oryza sativa Japonica Group] gi|215678548|dbj|BAG92203.1| unnamed protein product [Oryza sativa Japonica Group] gi|215737442|dbj|BAG96572.1| unnamed protein product [Oryza sativa Japonica Group] gi|215737710|dbj|BAG96840.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740833|dbj|BAG96989.1| unnamed protein product [Oryza sativa Japonica Group] Length = 305 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + ++ +L + V G +N + +MERY++ R + +II+L +T LQ A +VI Sbjct: 12 LSQAEQDVQMMLAADVHLGTKN--CDFQMERYVYKRRSDGIYIINLGKTWEKLQLAARVI 69 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN Sbjct: 70 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN-------------- 114 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +L+ + P L+ + D + I+E+ Sbjct: 115 ------------------------QLQTSF-------SEPRLLILTDPRTDHQPIKESAL 143 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI L+A + Sbjct: 144 GNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQ 188 >gi|126642363|ref|YP_001085347.1| 30S ribosomal protein S2 [Acinetobacter baumannii ATCC 17978] gi|126388247|gb|ABO12745.1| 30S ribosomal protein S2 [Acinetobacter baumannii ATCC 17978] Length = 108 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 48/100 (48%), Positives = 69/100 (69%) Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVI 201 +KL+R+L G+++MGGLPD +FV+D + E +AI+EA+ L IP++ +VDTNSNPD VDYVI Sbjct: 1 MEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVI 60 Query: 202 PGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 PGNDD+ R++ L+ +A A + G S A K Sbjct: 61 PGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGDD 100 >gi|15218458|ref|NP_177381.1| P40; structural constituent of ribosome [Arabidopsis thaliana] gi|73920779|sp|Q08682|RSSA1_ARATH RecName: Full=40S ribosomal protein Sa-1; AltName: Full=Laminin receptor homolog; AltName: Full=p40 gi|12325280|gb|AAG52587.1|AC016529_18 putative 40S ribosomal protein SA (laminin receptor-like protein); 68387-70081 [Arabidopsis thaliana] gi|402904|gb|AAA53425.1| laminin receptor-like protein [Arabidopsis thaliana] gi|15809888|gb|AAL06872.1| At1g72370/T10D10_16 [Arabidopsis thaliana] gi|16604531|gb|AAL24271.1| At1g72370/T10D10_16 [Arabidopsis thaliana] gi|17473615|gb|AAL38272.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|18958036|gb|AAL79591.1| At1g72370/T10D10_16 [Arabidopsis thaliana] gi|21386953|gb|AAM47880.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|21593556|gb|AAM65523.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|22530972|gb|AAM96990.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|23198426|gb|AAN15740.1| putative 40S ribosomal protein SA (laminin receptor-like protein) [Arabidopsis thaliana] gi|332197192|gb|AEE35313.1| 40S ribosomal protein Sa-1 [Arabidopsis thaliana] Length = 298 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 91/278 (32%), Gaps = 55/278 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + +R + + V G +N N +MERY+F RN +I +L +T LQ A +VI Sbjct: 12 LSQKEADVRMMCAAEVHLGTKN--CNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVI 69 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + G TN S S Sbjct: 70 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSE------ 122 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+E Sbjct: 123 ---------------------------------------PRLLILTDPRTDHQPIKEGAL 143 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPI+A DT+S VD IP N+ SI L+A + Sbjct: 144 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVL------QMRGTIAAGQ 197 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + +V + EE E E +P Sbjct: 198 KWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPE 235 >gi|122066029|sp|Q0PXX8|RSSA_DIACI RecName: Full=40S ribosomal protein SA gi|110671460|gb|ABG81981.1| putative 40S ribosomal protein SA [Diaphorina citri] Length = 301 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 99/281 (35%), Gaps = 51/281 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G N + +ME+Y++ RN HI++L +T L A + I Sbjct: 8 LSLKEDDVTKMLGAQTHIGSENS--DYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + I EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPHTDHQPITEAAY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A +T S VD IP N+ S SI L L+A + D Sbjct: 140 VNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGTIPREPKWDVVV 199 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD--GQEVAVVPELMS 278 +E + E+ + S +++ D E A S Sbjct: 200 DLFFYRDPEEAEKEEQAGKESAAAIADKPADEFAAHAPTES 240 >gi|79321150|ref|NP_001031267.1| P40; structural constituent of ribosome [Arabidopsis thaliana] gi|222423427|dbj|BAH19684.1| AT1G72370 [Arabidopsis thaliana] gi|332197193|gb|AEE35314.1| 40S ribosomal protein Sa-1 [Arabidopsis thaliana] Length = 294 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 91/278 (32%), Gaps = 55/278 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + +R + + V G +N N +MERY+F RN +I +L +T LQ A +VI Sbjct: 12 LSQKEADVRMMCAAEVHLGTKN--CNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVI 69 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + G TN S S Sbjct: 70 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSE------ 122 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+E Sbjct: 123 ---------------------------------------PRLLILTDPRTDHQPIKEGAL 143 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPI+A DT+S VD IP N+ SI L+A + Sbjct: 144 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVL------QMRGTIAAGQ 197 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + +V + EE E E +P Sbjct: 198 KWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPE 235 >gi|253807631|gb|ACT36209.1| ribosomal protein S2 [Helicosporidium sp. ex Simulium jonesi] Length = 286 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 34/229 (14%) Query: 13 ESGVQFGH-----RNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 E G Q+GH R + W+P M I RN II T+ L +A +IS + G Sbjct: 34 ELGTQYGHLFQDIRYYQWHPFMSSSILGLRNGRPIISAQVTLRSLCRAFFLISHIFLKNG 93 Query: 68 RILFVATKSQASDCVMEAAKRS-------------AQYCVNSKWLGGMMTNWKTVSQSIQ 114 +L V T + + + K+ KW+GG +TN+ +S+SI Sbjct: 94 NLLIVNTNPKYTKLCNKLFKQKNSSSSVKNSIKKKGISYCFHKWIGGTLTNYDQISKSIY 153 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRD----------------MGGL 158 ++L + + K K ++ ++L G + + G Sbjct: 154 YFMMFKKLYHYLRKNRITKLNFKEFPKYKRICKSLKGYMNRELITRNNSINRYSITLSGK 213 Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 PDL+ ++ I EA RL IP++A+V+ + N + Y IP N++S Sbjct: 214 PDLILCMNPQDNLSLINEAYRLNIPVIALVEPHINIKKITYPIPCNNNS 262 >gi|16380|emb|CAA48794.1| laminin receptor homologue [Arabidopsis thaliana] Length = 298 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 89/271 (32%), Gaps = 55/271 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 +R + + V G +N N +MERY+F RN +I +L +T LQ A +VI + Sbjct: 19 VRMMCAAEVHLGTKN--CNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV-AIENP 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S S Sbjct: 76 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSE------------- 122 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IPI+A Sbjct: 123 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPIIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 DT+S VD IP N+ SI L+A + + +V Sbjct: 151 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVL------QMRGTIAAGQKWDVMVD 204 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 +LEE E E +P Sbjct: 205 LFFYRELEETKPEDEDEAGPQAEYGALPAPE 235 >gi|116792378|gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN40308.1| unknown [Picea sitchensis] Length = 319 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L + V G +N + +MERY++ R + II+L +T LQ A +VI Sbjct: 8 LSQKEADIQMMLAADVHLGTKN--CDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN S + Sbjct: 66 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNE------ 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+EA Sbjct: 119 ---------------------------------------PRLLILTDPRTDHQPIREAAL 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI ++A + Sbjct: 140 GNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQ 184 >gi|2500393|sp|Q01661|RS0_PNECA RecName: Full=40S ribosomal protein S0; AltName: Full=Extracellular matrix receptor protein gi|493057|gb|AAA52187.1| extracellular matrix receptor protein [Pneumocystis carinii] Length = 295 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 102/270 (37%), Gaps = 56/270 (20%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 A P I L+ + G RN +ME Y+F R + HII+L + L A ++I Sbjct: 6 AQPAADIEMLISANCHIGSRN--CELRMEPYVFKRRADGVHIINLGKRWEKLILAARIIV 63 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQY-CVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ I+ V+++S V + A + ++S++ G TN+ T Sbjct: 64 -TIENPTDIIAVSSRSYGQRAVHKYALHTGAREAISSRFTPGSFTNYIT----------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + KE P L+ V D + AI+EA Sbjct: 112 ----------RSYKE------------------------PRLIIVTDPRTDSQAIKEASY 137 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A+ DT+S VD IP N+ SI L ++A + + + + Sbjct: 138 VNIPVIALCDTDSPLQYVDVAIPTNNKGRHSIGLIWWMLAREVLR-LRGTLANRDVEWGI 196 Query: 240 AGE-----TVVHSKEGMQLEEDSQSSESSV 264 + +++ + E+ + + + Sbjct: 197 MVDLYFYRDPEETEKDTESEQKALEASGNP 226 >gi|145605595|ref|XP_001406293.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|229891591|sp|A4R188|RSSA_MAGO7 RecName: Full=40S ribosomal protein S0 gi|145013412|gb|EDJ98053.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 287 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 102/286 (35%), Gaps = 63/286 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + M Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQSHIGSKNLQVH--MAPYLWKTRQDGVNVINVGKTWEKIVLAARIIT-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-----------A 235 + DT+S + VD IP N+ +I ++A + ++ Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHAIGCIWWMLAREVLRLRGTIYNRETPWDVMVDLYFYR 208 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPELMS 278 D ++ E V ++ +EE ++ S G A P S Sbjct: 209 DPEAEAEDKVEEEKLAGVEEVGPAAIESGFATGGGDWEATAPAAAS 254 >gi|124802649|ref|XP_001347548.1| 40S ribosomal protein S2B, putative [Plasmodium falciparum 3D7] gi|74930131|sp|Q8IJD4|RSSA_PLAF7 RecName: Full=40S ribosomal protein SA gi|23495130|gb|AAN35461.1| 40S ribosomal protein S2B, putative [Plasmodium falciparum 3D7] Length = 263 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 49/220 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I ++L V G +N KM+RY++ ++ HII+L++T LQ A ++I + Sbjct: 11 EESIAKMLICKVHIGTKN--LENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIV-AI 67 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + ++ V+ + S V++ A+ + + +W GM+TN Q IQK + Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKFTE----- 117 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 P L+ V D + +++E+ IP Sbjct: 118 -----------------------------------PRLLIVTDPRTDAQSVKESAYANIP 142 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++A+ D++S + VD IP N+ SIAL L+A + Sbjct: 143 VIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVL 182 >gi|312221376|emb|CBY01316.1| hypothetical protein [Leptosphaeria maculans] Length = 300 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 94/268 (35%), Gaps = 49/268 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I + Sbjct: 17 IEMLLAAQCHLGAKNLQVH--MEPYLWKTRPDGVNVINVGKTWEKIVLAARIIV-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + D +S + VD IP N+ +I L ++A + S Sbjct: 149 LCDGDSPTEYVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLASREAEWDVMTDLYFYR 208 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAVVP 274 E + ++ + E+ V EV Sbjct: 209 DPEAEENKDSAGVEEAKVPGADEVGPAA 236 >gi|226491586|ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|194708106|gb|ACF88137.1| unknown [Zea mays] gi|195626134|gb|ACG34897.1| 40S ribosomal protein SA [Zea mays] Length = 308 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY+F R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQMERYVFKRRTDGIYIINLGKTWDKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L+A + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQ 189 >gi|300123321|emb|CBK24594.2| unnamed protein product [Blastocystis hominis] Length = 245 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 56/239 (23%) Query: 1 MALPQFT---IRQLLESGVQFGHRNFLWNPKMERYIFCERN--NTHIIDLSQTVPMLQKA 55 MA + T +R++L + +G +N N M+ Y+F RN HII+L++T L A Sbjct: 1 MAFTKPTDDDVRKMLVARTHYGTKN--LNFMMKDYVF-RRNKEGVHIINLAKTWEKLVLA 57 Query: 56 LQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQK 115 ++I + ++ + + + V++ K + ++ ++ G TN T ++ Sbjct: 58 ARIIV-AIENPQDVIVIGARENSQRAVLKFCKYTGCQTISGRYTPGTFTNQIT-----KQ 111 Query: 116 LRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQ 175 R+ P L+ V D + +K AI Sbjct: 112 FRE----------------------------------------PRLLIVTDPSCDKQAIH 131 Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSY 232 EA + IP +A DT+S + VD IP N + SI L +A + GI + + Sbjct: 132 EAACVNIPTIAFCDTDSPLEYVDCAIPCNTKNKNSIGLMMWFLAREVLRFRGIVSRDAE 190 >gi|255072475|ref|XP_002499912.1| predicted protein [Micromonas sp. RCC299] gi|226515174|gb|ACO61170.1| predicted protein [Micromonas sp. RCC299] Length = 296 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 102/273 (37%), Gaps = 52/273 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L +G G +N + +MERY++ R + +II+L +T L A +++ Sbjct: 5 LSQKEADIQMMLAAGCHLGTKN--CDFQMERYVWKRRQDGIYIINLGKTWDKLMLAARIL 62 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ +++ V++ A+ + + + G TN Sbjct: 63 V-AIENPSDVVVQSSRPYGQRAVLKYAQYTGAKAIAGRHTPGTYTNQ------------- 108 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I++ P ++ + D + I E Sbjct: 109 --------------------------------IQEGFHEPRVLVLTDPRTDHQPISETAY 136 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A DT+S LVD IP N+ + SI L+A + + + A+ Sbjct: 137 VNLPTIAFCDTDSPLKLVDVAIPANNKAKHSIGCLYYLLARMVL---QMRGTVSPANPWD 193 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 + ++ +LE+ + E++V+ Sbjct: 194 VMVDLFFYRDPEELEDKPAAEETAVVGDTPAGF 226 >gi|213406445|ref|XP_002173994.1| 40S ribosomal protein S0A [Schizosaccharomyces japonicus yFS275] gi|269969620|sp|B6K180|RSSA1_SCHJY RecName: Full=40S ribosomal protein S0-A gi|212002041|gb|EEB07701.1| 40S ribosomal protein S0A [Schizosaccharomyces japonicus yFS275] Length = 290 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N + +ME Y++ R + HII++ +T + A +VI+ T+ Sbjct: 17 IKQLLAASCHIGSKN--LDVRMENYVWKRRSDGVHIINIGKTWEKIVLAARVIA-TIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+++ V++ A + + ++ G TN+ T Sbjct: 74 ADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT------------------ 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 T +E P L+ D + AI+EA + IP+++ Sbjct: 116 ---RTYRE------------------------PRLIIATDPRADAQAIKEASYVNIPVIS 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S VD IP N+ +SI L L+A + Sbjct: 149 LCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLAREVLR 186 >gi|168021317|ref|XP_001763188.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685671|gb|EDQ72065.1| predicted protein [Physcomitrella patens subsp. patens] Length = 305 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 83/224 (37%), Gaps = 49/224 (21%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 + + ++ +L + V G +N + +MERY++ R + II++ +T L+ A +VI+ Sbjct: 1 TMKESDVQMMLAADVHLGTKN--CDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIA 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + I+ + + V++ A+ + + + G TN Sbjct: 59 -AIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQ-------------- 103 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 +++ P L+ + D + I EA Sbjct: 104 -------------------------------LQNTFSEPRLLILTDPRTDHQPIMEAALG 132 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++A DT+S VD IP N+ SI L+A + Sbjct: 133 NIPVIAFCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQ 176 >gi|294464827|gb|ADE77919.1| unknown [Picea sitchensis] Length = 330 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 82/218 (37%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY++ R + II+L +T LQ A +VI + Sbjct: 14 IQMMLAADVHLGTKN--CDFQMERYVYKRRSDGIFIINLGKTWEKLQIAARVIV-AIENP 70 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 71 QDIIVQSARPYGQRAVLKFAQFTGAHAIAGRHTPGTFTN--------------------- 109 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+EA IP +A Sbjct: 110 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIREAALGNIPTIA 145 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI ++A + Sbjct: 146 FCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQ 183 >gi|92429568|gb|ABD93528.2| mitochondrial small ribosomal subunit protein [Solanum tuberosum] Length = 175 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 38/209 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + G R + K+ Y RN IID +T+ L+ A I + V + Sbjct: 2 IQKLLSTNAHLGRRVAAHHFKI--YSIGSRNGMTIIDSEKTLICLRNACSFIGELVRQRA 59 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R +FV T + + + + + S LGG +TN + + + + L Sbjct: 60 RFIFVNTNTLFDEIIDQMTETIGCRNDTSWRLGGFLTNSSSPRKFRGRNKKL-------- 111 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 L I+ PD + + DT R+ IQEA +L+IPIV + Sbjct: 112 --------------------NLTAIQP----PDCVVIFDTERKSSVIQEAAKLQIPIVGL 147 Query: 188 VDTNSNPD---LVDYVIPGNDDSSRSIAL 213 VD++ D + Y +P D S + + L Sbjct: 148 VDSSMPLDIYKKITYPVPAKD-SVQFVYL 175 >gi|77416953|gb|ABA81872.1| ribosome-associated protein p40-like [Solanum tuberosum] Length = 278 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 89/263 (33%), Gaps = 49/263 (18%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +L + V G +N + +MERY+F RN +II+ +T L A +VI I Sbjct: 1 MLAAEVHLGTKN--CDFQMERYVFKRRNDGIYIINAGKTWDKLHMAARVIVSI-ENPQDI 57 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 + + + V++ A+ + + + + G TN S S +L Sbjct: 58 IVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYSEPRL------------- 104 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 + + D + I+EA IP +A D Sbjct: 105 --------------------------------LILTDPRTDHQPIKEAALGNIPTIAFCD 132 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKE 249 T+S VD IP N+ SI + ++A + + D +E Sbjct: 133 TDSPMRYVDIGIPANNKGKHSIGVLFWILARMVLQMRGTISAGPKWDVMVDLFFYREPEE 192 Query: 250 GMQLEEDSQSSESSVLDGQEVAV 272 +E+ + + + A+ Sbjct: 193 AKDQQEEEVPAIADYAEYGGAAL 215 >gi|139390141|ref|YP_001123714.1| ribosomal protein S2 [Lobularia maritima] gi|134286918|dbj|BAF50538.1| ribosomal protein S2 [Lobularia maritima] Length = 96 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 52/88 (59%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++ +GV FGH WNP+M YI +R HII+L++T L +A ++ D + Sbjct: 7 NIGLEEMMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQY 92 +G + L V TK++A+D V AA R+ + Sbjct: 67 KGKQFLIVGTKNKAADLVSRAAIRARCH 94 >gi|297841979|ref|XP_002888871.1| hypothetical protein ARALYDRAFT_895089 [Arabidopsis lyrata subsp. lyrata] gi|297334712|gb|EFH65130.1| hypothetical protein ARALYDRAFT_895089 [Arabidopsis lyrata subsp. lyrata] Length = 297 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 91/264 (34%), Gaps = 49/264 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + +R + + V G +N N +MERY+F RN +I +L +T LQ A +VI Sbjct: 12 LSQKEADVRMMCAAEVHLGTKN--CNYQMERYVFKRRNDGIYIFNLGKTWDKLQMAARVI 69 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + G TN S S Sbjct: 70 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSE------ 122 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+E Sbjct: 123 ---------------------------------------PRLLILTDPRTDHQPIKEGAL 143 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPI+A DT+S VD IP N+ SI L+A + + D Sbjct: 144 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIGAAQKWDVMV 203 Query: 240 AGETVVHSKEGMQLEEDSQSSESS 263 +E +ED + ++ Sbjct: 204 DLFFYREPEETKPEDEDEAAPQAE 227 >gi|210075142|ref|XP_500192.2| YALI0A18205p [Yarrowia lipolytica] gi|229891757|sp|Q6CGM0|RSSA_YARLI RecName: Full=40S ribosomal protein S0 gi|199424897|emb|CAG84124.2| YALI0A18205p [Yarrowia lipolytica] Length = 270 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 54/230 (23%) Query: 1 MALPQFT-----IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQK 54 M+ P F I+ LL + G +N + Y+F +R + +II++ +T +Q Sbjct: 1 MSAPIFDPTPEDIQNLLAAQTHIGSKNVQV--QNIPYVFKQRADGVNIINVGKTWEKIQL 58 Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A ++I+ V ++ ++ ++ V++ A + ++ G TN+ T + Sbjct: 59 AARIIA-AVPNPADVVAISARTYGQRAVLKFANHCGATAIAGRFTPGSFTNYIT-----R 112 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 ++ P L+ V D + AI Sbjct: 113 SFKE----------------------------------------PRLLIVTDPRTDHQAI 132 Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +EA + IP++A+VDT+S + VD IP N+ S+ L +++ + Sbjct: 133 KEASYVNIPVIALVDTDSPVEFVDVAIPCNNKGRHSVGLVWWMISREVLR 182 >gi|213022462|ref|ZP_03336909.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 87 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 41/82 (50%), Positives = 55/82 (67%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++ AR G Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKG 60 Query: 68 RILFVATKSQASDCVMEAAKRS 89 +ILFV TK AS+ V EAA Sbjct: 61 KILFVGTKRAASEAVKEAANSC 82 >gi|189192641|ref|XP_001932659.1| 40S ribosomal protein SA [Pyrenophora tritici-repentis Pt-1C-BFP] gi|330916768|ref|XP_003297553.1| hypothetical protein PTT_07993 [Pyrenophora teres f. teres 0-1] gi|229891609|sp|B2VY36|RSSA_PYRTR RecName: Full=40S ribosomal protein S0 gi|187978223|gb|EDU44849.1| 40S ribosomal protein SA [Pyrenophora tritici-repentis Pt-1C-BFP] gi|311329712|gb|EFQ94353.1| hypothetical protein PTT_07993 [Pyrenophora teres f. teres 0-1] Length = 300 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 93/268 (34%), Gaps = 49/268 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + +++++ +T + A ++I + Sbjct: 17 IEMLLAAQCHLGAKNLQVH--MEPYLWKTRPDGVNVLNIGKTWEKIVLAARIIV-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T Sbjct: 74 ADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYIT------------------ 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 R+ P L+ V D + AI+EA + IP++A Sbjct: 116 ----------RSFRE-----------------PRLVIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + D +S + VD IP N+ +I L ++A + + Sbjct: 149 LCDGDSPTEYVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLANRETEWDVMTDLYFYR 208 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAVVP 274 E + ++ + E+ V EV Sbjct: 209 DPEAEENKDSAGVEEAKVPGADEVGPAA 236 >gi|156082017|ref|XP_001608501.1| 40S ribosomal protein [Plasmodium vivax SaI-1] gi|229891607|sp|A5KE24|RSSA_PLAVI RecName: Full=40S ribosomal protein SA gi|148801072|gb|EDL42477.1| 40S ribosomal protein, putative [Plasmodium vivax] Length = 263 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 49/220 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I ++L V G +N KM+RY++ ++ HI++L++T LQ A ++I + Sbjct: 11 EESIAKMLICKVHIGTKN--LENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIV-AI 67 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ++ V+ + S V++ A+ + + +W GM+TN Q IQK + Sbjct: 68 NNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKFTE----- 117 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 P L+ V D + ++E+ IP Sbjct: 118 -----------------------------------PRLLIVTDPRTDAQPVKESAYANIP 142 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++A+ D++S + VD IP N+ SIAL L+A + Sbjct: 143 VIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVL 182 >gi|169605389|ref|XP_001796115.1| hypothetical protein SNOG_05719 [Phaeosphaeria nodorum SN15] gi|229891761|sp|Q0UR95|RSSA_PHANO RecName: Full=40S ribosomal protein S0 gi|160706754|gb|EAT86783.2| hypothetical protein SNOG_05719 [Phaeosphaeria nodorum SN15] Length = 301 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 94/268 (35%), Gaps = 49/268 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A ++I + Sbjct: 17 IEMLLAAQCHLGAKNLQVH--MEPYLWKTRPDGVNVINVGKTWEKIVLAARIIV-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + D +S + VD IP N+ +I L ++A + S Sbjct: 149 LCDGDSPTEYVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLASREAEWDVMTDLYFYR 208 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAVVP 274 E + ++ + E+ V EV Sbjct: 209 DPEAEENKDSAGVEEAKVPGADEVGPAA 236 >gi|221054077|ref|XP_002261786.1| 40s ribosomal protein [Plasmodium knowlesi strain H] gi|229891606|sp|B3L230|RSSA_PLAKH RecName: Full=40S ribosomal protein SA gi|193808246|emb|CAQ38949.1| 40s ribosomal protein, putative [Plasmodium knowlesi strain H] Length = 264 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 49/220 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTV 63 + +I ++L V G +N KM+RY++ ++ HI++L++T LQ A ++I + Sbjct: 12 EESIAKMLICKVHIGTKN--LENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIV-AI 68 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 ++ V+ + S V++ A+ + + +W GM+TN Q IQK + Sbjct: 69 NNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTN-----QIIQKFTE----- 118 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 P L+ V D + ++E+ IP Sbjct: 119 -----------------------------------PRLLIVTDPRTDAQPVKESAYANIP 143 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 ++A+ D++S + VD IP N+ SIAL L+A + Sbjct: 144 VIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVL 183 >gi|116787462|gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN40658.1| unknown [Picea sitchensis] Length = 319 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + ++ +L + V G +N + +MERY++ R + II+L +T LQ A +VI Sbjct: 8 LSQKEADVQMMLAADVHLGTKN--CDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + + G TN S + Sbjct: 66 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNE------ 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+EA Sbjct: 119 ---------------------------------------PRLLILTDPRTDHQPIREAAL 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +A DT+S VD IP N+ SI ++A + Sbjct: 140 GNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQ 184 >gi|71029482|ref|XP_764384.1| 40S ribosomal protein SA [Theileria parva strain Muguga] gi|122082553|sp|Q4N1J1|RSSA_THEPA RecName: Full=40S ribosomal protein SA gi|68351338|gb|EAN32101.1| 40S ribosomal protein SA, putative [Theileria parva] Length = 274 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +IR +L + V G +N KM +Y++ + H+I+L+ T+ L+ A + I TV+ Sbjct: 14 SIRMMLTAKVHIGTKNV--ENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIV-TVSN 70 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ + + + +W+ G +TN T Sbjct: 71 PEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIE------------ 118 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ D + +++E+ + +P++ Sbjct: 119 ---------------------------------PRLLVATDPRTDAQSLRESSYVSLPVI 145 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A+ DT+S + VD IP N+ SIAL L+A + Sbjct: 146 ALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVL 183 >gi|92429570|gb|ABD93529.2| mitochondrial small ribosomal subunit protein [Coffea canephora] Length = 173 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 38/208 (18%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + K+ Y RN IID +T+ L+ A I + V GR Sbjct: 1 QKLLSTNAHLGRRVAAHHFKI--YSCGSRNAMTIIDSDKTLICLRNACNFIGNLVRLKGR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 LFV T + + + E K S LGG +TN + + + + L Sbjct: 59 FLFVNTNTLFDEIIEEMTKAVGIKNDKSWRLGGFLTNSSSPKKFRGRNKKL--------- 109 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 L I PD + + DT R+ I EA RL++PIV +V Sbjct: 110 -------------------NLGAI----HAPDCVVIFDTERKSSVILEAERLQVPIVGLV 146 Query: 189 DTNSNPD---LVDYVIPGNDDSSRSIAL 213 D++ + + Y +P ND S + + L Sbjct: 147 DSSMPWETYKKITYPVPAND-SVQFVYL 173 >gi|226502398|ref|NP_001141003.1| acidic ribosomal protein P40 [Zea mays] gi|194702126|gb|ACF85147.1| unknown [Zea mays] Length = 310 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 82/218 (37%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY F R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQMERYAFKRRTDGIYIINLGKTWEKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L+A + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQ 189 >gi|213405249|ref|XP_002173396.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] gi|269969621|sp|B6K1S2|RSSA2_SCHJY RecName: Full=40S ribosomal protein S0-B gi|212001443|gb|EEB07103.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] Length = 283 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N + +ME Y++ R + +II++ +T + A +VI+ T+ Sbjct: 18 IKQLLAASCHIGSKN--LDVRMENYVWKRRADGVNIINIGKTWEKIVLAARVIA-TIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T Sbjct: 75 ADVCVISARPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT------------------ 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 T +E P L+ V D + AI+EA + IP++A Sbjct: 117 ---RTYRE------------------------PRLIVVTDPRADHQAIKEASYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S VD IP N+ +SI L L+A + Sbjct: 150 LCDTDSPLAHVDIAIPTNNKGYKSIGLVWWLLAREVLR 187 >gi|11466658|ref|NP_066341.1| ribosomal protein S2 [Malawimonas jakobiformis] gi|10178696|gb|AAG13708.1|AF295546_34 ribosomal protein S2 [Malawimonas jakobiformis] Length = 204 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 39/230 (16%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M T++QLL++G+ GH+ WNPKM Y+ + HII+L T+ +L+K + VI Sbjct: 1 MIKITLTLKQLLKAGLHLGHQKKRWNPKMSMYLIGIIKDIHIINLEYTIIILKKIIDVIH 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + G+ILF+ ++ ++ K + G+ TN Sbjct: 61 NIIINKGKILFLINNINDITNIINKISNKHIQVIDGKEIHGIFTN--------------- 105 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 K+ ++K +L +PD +F+ + N I EA +L Sbjct: 106 ----KDLYNYSKSSKLF--------------------IPDALFITNMNNYIYTINEANKL 141 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 RIPI++ VD+N NP L+ Y IPGN+DS +SI +L+ + ++ I +++ Sbjct: 142 RIPIISFVDSNCNPTLITYPIPGNNDSIQSIQFLYNLLNNIILNSIIKEN 191 >gi|320593737|gb|EFX06146.1| 40S ribosomal protein s0 [Grosmannia clavigera kw1407] Length = 296 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + M Y++ R + ++I++ +T + A ++I+ V Sbjct: 17 IEVLLAAQCHIGSKNLQVH--MNPYLWKTRADGVNVINIGKTWEKIVLAARIIA-AVDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 SDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S D VD IP N+ +I L+A + Sbjct: 149 LCDTDSPTDFVDVAIPTNNKGRHAIGAVWWLLAREVLR 186 >gi|302830943|ref|XP_002947037.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] gi|300267444|gb|EFJ51627.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] Length = 280 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 97/275 (35%), Gaps = 57/275 (20%) Query: 1 MALPQ--FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQ 57 MAL Q I+ +L + G +N + +MERY++ R + +II+L +T LQ A + Sbjct: 1 MALSQKEQDIQMMLAAQCHLGTKN--CHYQMERYMYRRRQDGIYIINLEKTYEKLQMAAR 58 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 VI + I ++ + V + A+ + + G TN Sbjct: 59 VIV-AIENPQDICVLSARPYGQRAVFKFAQYLGCKSMAGRHTPGTFTNQ----------- 106 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 I+ P L+ + D + ++E+ Sbjct: 107 ----------------------------------IQKAFEEPRLLILTDPRTDHQPVKES 132 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 + IP +A DT+S VD IP N+ SI + L+A ++ Sbjct: 133 SYMNIPTIAFCDTDSPLTYVDVAIPANNKGKHSIGVLYWLLARMVLE------MREQVTP 186 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 + +V + EE + E +G+ A+ Sbjct: 187 ANPWNVMVDLFFYREPEETKEGGEDEAYEGEAYAL 221 >gi|125544237|gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group] Length = 310 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + +MERY++ R + II+L +T LQ A +VI + Sbjct: 21 IQMMLAADVHLGTKN--CDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIV-AIENP 77 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 78 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 116 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 117 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 152 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +SI L+A + Sbjct: 153 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 190 >gi|184186097|ref|NP_001116970.1| 40S ribosomal protein SA [Strongylocentrotus purpuratus] Length = 341 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 84/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + +++ L SG G + + KM YI+ + + + II+L +T L A ++I Sbjct: 8 LALKEDDVQKFLASGAHIG--SSNMDYKMAPYIYKRKPDGSFIINLRKTWEKLLLAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 V + ++++ V++ + V ++ G TN Sbjct: 66 V-AVENPADVCVISSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P ++ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRILIVTDPRSDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +++S VD IP N+ S SI L +++ + Sbjct: 140 VNIPVIALCNSDSPLRHVDIAIPCNNKSIHSIGLMWWMLSREVLR 184 >gi|322698585|gb|EFY90354.1| 40S ribosomal protein S0 [Metarhizium acridum CQMa 102] gi|322709782|gb|EFZ01357.1| 40S ribosomal protein S0 [Metarhizium anisopliae ARSEF 23] Length = 280 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + +II++ +T + A ++I V Sbjct: 17 IEMLLAAQCHVGSKNLQVH--MEPYLWKTRADGVNIINIGKTWEKIVLAARIIV-AVENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGASSIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L+A + Sbjct: 149 LCDTDSLTEYVDVAIPTNNKGRHAIGTIWWLLAREVLR 186 >gi|171690138|ref|XP_001909994.1| hypothetical protein [Podospora anserina S mat+] gi|229891608|sp|B2B1Z3|RSSA_PODAN RecName: Full=40S ribosomal protein S0 gi|170945017|emb|CAP71128.1| unnamed protein product [Podospora anserina S mat+] Length = 291 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N + + Y++ R + +II++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHIGSKNLGVHAQ--PYLWKTRADGVNIINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 SDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ SI L ++A + Sbjct: 149 LCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLR 186 >gi|325302798|tpg|DAA34051.1| TPA_exp: 40S ribosomal protein SA [Amblyomma variegatum] Length = 232 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 100/279 (35%), Gaps = 62/279 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + +R++L + G + +M+ Y F R + H+I+L +T L A + I Sbjct: 8 LALKEDDVRRMLTAKTHLG--TSNLDFQMKEYCFKRRPDGIHLINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPAEVCAISSRPYGQRAVLKFASFTGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVCDPRADHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P++A +T++ VD IP N+ S SI L ++ + R + D Sbjct: 140 VNLPVIAFCNTDATLRYVDIAIPCNNKSQHSIGLMWWMLTREVL----RMRGSILRDI-- 193 Query: 240 AGETVV-----HSKEGMQLEEDSQ--SSESSVLDGQEVA 271 E +V E + EE +Q + E +V + E+ Sbjct: 194 PWEIMVDLFFYRDPEETEKEEQAQQVAPERAVKEAAEIL 232 >gi|170587222|ref|XP_001898377.1| 28S ribosomal protein S2, mitochondrial [Brugia malayi] gi|158594203|gb|EDP32789.1| 28S ribosomal protein S2, mitochondrial, putative [Brugia malayi] Length = 229 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 76/229 (33%), Gaps = 63/229 (27%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 TI L + V +GH+ +T L AL ++ R Sbjct: 63 ITIDDLFHARVHYGHK-------------------------KTRECLITALNFVAHLAMR 97 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 GG LF+ T+ V A ++ W + N K + + +L D L+ Sbjct: 98 GGMFLFITTERNNMLMVERKALEINEFAHVRGWKEDTLLNAKALFGAPVRLPDTIIFLST 157 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 + A++EA ++ IP + Sbjct: 158 --------------------------------------LTSVLETHPAVREAAKMVIPTI 179 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 +VD+N++P + Y IPGNDDS S+ F D A G + S + Sbjct: 180 GIVDSNADPTNITYPIPGNDDSVSSVQYFMDCFVKAVKVGKEARRSLLS 228 >gi|84997323|ref|XP_953383.1| ribosomal protein S2 [Theileria annulata strain Ankara] gi|74950469|sp|Q4U8U5|RSSA_THEAN RecName: Full=40S ribosomal protein SA gi|65304379|emb|CAI76758.1| ribosomal protein S2, putative [Theileria annulata] Length = 274 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +IR +L + V G +N KM +Y++ + H+I+L+ T+ L+ A + I TV+ Sbjct: 14 SIRMMLTAKVHIGTKNV--ENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIV-TVSN 70 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S V++ + + + +W+ G +TN T Sbjct: 71 PEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIE------------ 118 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ D + +++E+ + +P++ Sbjct: 119 ---------------------------------PRLLVATDPRTDAQSLKESSYVSLPVI 145 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A+ DT+S + VD IP N+ SIAL L+A + Sbjct: 146 ALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVL 183 >gi|168017628|ref|XP_001761349.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687355|gb|EDQ73738.1| predicted protein [Physcomitrella patens subsp. patens] Length = 292 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 49/223 (21%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61 + + ++ +L + V G +N + +MERY++ R + II++ +T L+ A +VI+ Sbjct: 1 MKESDVQMMLAADVHLGTKN--CDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIA- 57 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + I+ + + V++ A+ + + + G TN Sbjct: 58 AIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQ--------------- 102 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +++ P L+ + D + I EA Sbjct: 103 ------------------------------LQNTFSEPRLLILTDPRTDHQPIMEAALGN 132 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++A DT+S VD IP N+ SI L+A + Sbjct: 133 IPVIAFCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQ 175 >gi|168048391|ref|XP_001776650.1| predicted protein [Physcomitrella patens subsp. patens] gi|168048465|ref|XP_001776687.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671942|gb|EDQ58486.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671979|gb|EDQ58523.1| predicted protein [Physcomitrella patens subsp. patens] Length = 292 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 83/223 (37%), Gaps = 49/223 (21%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61 + + ++ +L + V G +N + +MERY++ R + II++ +T L+ A +VI+ Sbjct: 1 MKESDVQMMLAADVHLGTKN--CDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIA- 57 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + I+ + + V++ A+ + + + G TN Sbjct: 58 AIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQ--------------- 102 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +++ P L+ + D + I EA Sbjct: 103 ------------------------------LQNTFSEPRLLILTDPRTDHQPIMEAALGN 132 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++A DT+S VD IP N+ SI L+A + Sbjct: 133 IPVIAFCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQ 175 >gi|195999370|ref|XP_002109553.1| expressed hypothetical protein [Trichoplax adhaerens] gi|229891613|sp|B3RPX6|RSSA_TRIAD RecName: Full=40S ribosomal protein SA gi|190587677|gb|EDV27719.1| expressed hypothetical protein [Trichoplax adhaerens] Length = 286 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 52/269 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + ++L + G + +ME+Y+F R + HIIDL QT L A ++I+ Sbjct: 15 VSKMLAASAHLG--TTNVDYQMEQYVFRRRTDGVHIIDLRQTWEKLLIAARIIASI-ENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ AK + + ++ G TN Sbjct: 72 ADVCVLSARPYGQRAVLKFAKFTGASPIAGRFTPGTFTNQ-------------------- 111 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 I+ P L+ V D + I EA + IP++A Sbjct: 112 -------------------------IQKAYREPRLLIVTDPRVDHQPITEASYVNIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET-VV 245 +T+S +D IP N+ + +I L L+A + R D + + Sbjct: 147 FCNTDSRLRYIDVGIPCNNKGAHAIGLMWWLLAREVL--RLRGTISRDTDWEHMPDLFFY 204 Query: 246 HSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 E ++ EE +Q+++ + + Sbjct: 205 RDPEEVEKEEQAQNNKWAAPEQSPALSAA 233 >gi|296040608|gb|ADG85272.1| ribosomal protein S2 [Silene noctiflora] Length = 90 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 53/90 (58%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +E+GV GH WNP+M YI + HII+L++T L +A ++ D + + LF Sbjct: 1 MEAGVHLGHGIRKWNPRMLPYISAKFKGRHIINLTRTARFLSEACDLVFDAASTDKQFLF 60 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 V TK +A+ V AA+R+ + VN KWLGG Sbjct: 61 VGTKKKAAYLVARAARRARCHYVNKKWLGG 90 >gi|93116152|gb|ABE98783.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 416 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 51/259 (19%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LL + G R + ++ YI C RN I+D +T+ L+ AL + + + R Sbjct: 12 KLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRS 69 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 F+ TK+ + AK + C+N S+W +G TN Sbjct: 70 FFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY-------------------- 105 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KK R + L PD + ++ +R+ I EA R +IPI ++ Sbjct: 106 -ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEADRSQIPIASL 154 Query: 188 VDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--------QHSYMGAD 236 VD+ L ++Y IP ND R + LF + + I R + Sbjct: 155 VDSTIPWKLDKRINYSIPANDP-MRLVYLFRNSITKTVILERKRITAKNRTPRSHLSSCT 213 Query: 237 TKSAGETVVHSKEGMQLEE 255 KSA ++HS+E E Sbjct: 214 EKSAAGIIIHSREVSSWAE 232 >gi|94502568|ref|YP_588402.1| ribosomal protein S2 [Zea mays subsp. mays] gi|114151653|ref|YP_740415.1| ribosomal protein S2 [Zea mays subsp. parviglumis] gi|40795007|gb|AAR91051.1| ribosomal protein S2 [Zea mays] gi|93116104|gb|ABE98736.1| ribosomal protein S2 [Zea mays subsp. mays] gi|102567986|gb|ABF70870.1| ribosomal protein S2 [Zea mays subsp. parviglumis] gi|102579653|gb|ABF70933.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 416 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 51/259 (19%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LL + G R + ++ YI C RN I+D +T+ L+ AL + + + R Sbjct: 12 KLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRS 69 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 F+ TK+ + AK + C+N S+W +G TN Sbjct: 70 FFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY-------------------- 105 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KK R + L PD + ++ +R+ I EA R +IPI ++ Sbjct: 106 -ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEADRSQIPIASL 154 Query: 188 VDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--------QHSYMGAD 236 VD+ L ++Y IP ND R + LF + + I R + Sbjct: 155 VDSTIPWKLDKRINYSIPANDP-MRLVYLFRNSITKTVILERKRITAKNRTPRSHLSSCT 213 Query: 237 TKSAGETVVHSKEGMQLEE 255 KSA ++HS+E E Sbjct: 214 EKSAAGIIIHSREVSSWAE 232 >gi|320165423|gb|EFW42322.1| 40S ribosomal protein SA [Capsaspora owczarzaki ATCC 30864] Length = 302 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL + V G +N +M Y++ R + H+I+L +T + A ++I V Sbjct: 45 IQKLLAANVHLGAKNV--EQQMLSYVYKRRIDGIHLINLHKTWEKIVLAARIIV-AVENP 101 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ ++ +++ A + + ++ G TN Sbjct: 102 ADVAVISARTYGQRAILKFAAHTGAQSIAGRFTPGTFTNQ-------------------- 141 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 I+ P ++ V D + AI+EA + IPI+A Sbjct: 142 -------------------------IQAAFKEPRVLIVTDPRADHQAIREAAYVNIPIIA 176 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +++ L L+A + Sbjct: 177 FCDTDSPLRYVDVAIPCNNKAAQPTGLIWWLLAREVLR 214 >gi|297833174|ref|XP_002884469.1| hypothetical protein ARALYDRAFT_477746 [Arabidopsis lyrata subsp. lyrata] gi|297330309|gb|EFH60728.1| hypothetical protein ARALYDRAFT_477746 [Arabidopsis lyrata subsp. lyrata] Length = 318 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 79/218 (36%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F RN +II+L +T LQ A +VI + Sbjct: 20 IQMMLSADVHLGTKN--CNYQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S S Sbjct: 77 KDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSE------------- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IP +A Sbjct: 124 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L+A + Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQ 189 >gi|205373403|ref|ZP_03226207.1| 30S ribosomal protein S2 [Bacillus coahuilensis m4-4] Length = 92 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 35/72 (48%), Positives = 52/72 (72%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV +++A +V+ + Sbjct: 1 MSVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYKVMREI 60 Query: 63 VARGGRILFVAT 74 A G+ILFV T Sbjct: 61 AANDGKILFVGT 72 >gi|145629994|ref|ZP_01785776.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|145632291|ref|ZP_01788026.1| 30S ribosomal protein S2 [Haemophilus influenzae 3655] gi|145641897|ref|ZP_01797471.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|144984275|gb|EDJ91698.1| 30S ribosomal protein S2 [Haemophilus influenzae R3021] gi|144987198|gb|EDJ93728.1| 30S ribosomal protein S2 [Haemophilus influenzae 3655] gi|145273376|gb|EDK13248.1| 30S ribosomal protein S2 [Haemophilus influenzae 22.4-21] Length = 105 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 1/106 (0%) Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDL 196 R+ +KL+ +L GI+DMGGLPD +FV+ + E +A++EA L IP+ A+VDTNS P Sbjct: 1 MRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLGIPVFAIVDTNSTPAG 60 Query: 197 VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 VD+VIPGNDD++R+I L+ A+A +G + + + + + E Sbjct: 61 VDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNE-AQVAEELAADAE 105 >gi|9944889|gb|AAG03027.1|AF273103_1 ribosomal protein S2 [Zea mays] Length = 531 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 93/244 (38%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G TN Sbjct: 59 YLICQKSRFFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 KK R + L PD + ++ +R+ I EA Sbjct: 104 ----------ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPIV +VD+ + IP ND + LFC+L+ ++ + G Sbjct: 144 RSQIPIVYLVDSTIPSHKRFTFTIPANDSLRLLVYLFCNLITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|237862666|gb|ACR24958.1| ribosomal protein SA [Lepidochitona cinerea] Length = 217 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + + L G G N + +ME+YI+ + + II+L +T L A + I Sbjct: 2 LSLKEEDVVKFLACGTHLGSTNT--DFQMEQYIYKRKPDGVFIINLRKTWEKLLLAARAI 59 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++ + V++ A+ + + ++ G TN Sbjct: 60 ASI-ENPADVCIISARPYRQRAVLKLAQYTGATPIAGRFTPGTFTNQ------------- 105 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 106 --------------------------------IQAAFREPRLLVVTDPRTDHQPVTEASY 133 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ SI L L+A + Sbjct: 134 VNIPVIALCNTDSPLRYVDIAIPCNNKGIHSIGLMWWLLAREVLR 178 >gi|313231056|emb|CBY19054.1| unnamed protein product [Oikopleura dioica] Length = 261 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 43/232 (18%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + + + ++ + GH + NP ME YI RN T IIDL Q+ L AL I Sbjct: 46 NKIKWQDMYKARMHLGHSVIMRNPFMEPYILGCRNGTDIIDLDQSRAQLLIALNFIGHVA 105 Query: 64 ARGGRILFV-ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 RGG ILF+ ++ +S ++AAK + +YC S E + Sbjct: 106 LRGGTILFMPNSEGSSSRAALKAAKEAGEYCDTS---------------------VNEPV 144 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 +N + + + L L + G LP I I Sbjct: 145 FVSDNATRVEPDIVI-------LLNCLG--KTPGVLPRH------------ITGCCERNI 183 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 PI+ +VDT+ NP ++ Y IP ND+S+ S+ + ++ ++S G Sbjct: 184 PIIGIVDTDINPSMISYPIPCNDESTLSVNYVLKQMVDVILNAKELRNSIQG 235 >gi|255522992|gb|ACU12388.1| RE42047p [Drosophila melanogaster] Length = 313 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 51 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 108 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 109 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 154 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 155 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 183 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 227 >gi|194912510|ref|XP_001982520.1| sta [Drosophila erecta] gi|229891599|sp|B3P9J3|RSSA_DROER RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|190648196|gb|EDV45489.1| sta [Drosophila erecta] Length = 270 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 184 >gi|45551198|ref|NP_726745.2| stubarista, isoform D [Drosophila melanogaster] gi|150421662|sp|P38979|RSSA_DROME RecName: Full=40S ribosomal protein SA; AltName: Full=K14; AltName: Full=Laminin receptor homolog; AltName: Full=Protein stubarista gi|45446772|gb|AAN09050.2| stubarista, isoform D [Drosophila melanogaster] Length = 313 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 51 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 108 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 109 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 154 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 155 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 182 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 183 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 227 >gi|17136518|ref|NP_476750.1| stubarista, isoform A [Drosophila melanogaster] gi|24639112|ref|NP_726744.1| stubarista, isoform B [Drosophila melanogaster] gi|195347652|ref|XP_002040366.1| GM18969 [Drosophila sechellia] gi|195469755|ref|XP_002099802.1| sta [Drosophila yakuba] gi|122091662|sp|Q0H6L1|RSSA_DROSI RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|122114899|sp|Q0H6L0|RSSA_DROTE RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891615|sp|B4I9F6|RSSA_DROSE RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891618|sp|B4PY37|RSSA_DROYA RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|158031|gb|AAA28741.1| p40 [Drosophila melanogaster] gi|3292889|emb|CAA19839.1| EG:80H7.6 [Drosophila melanogaster] gi|21430162|gb|AAM50759.1| LD09376p [Drosophila melanogaster] gi|22831494|gb|AAF45638.2| stubarista, isoform A [Drosophila melanogaster] gi|22831495|gb|AAN09049.1| stubarista, isoform B [Drosophila melanogaster] gi|77682747|gb|ABB00655.1| stubarista [Drosophila simulans] gi|77682749|gb|ABB00656.1| stubarista [Drosophila teissieri] gi|115646347|gb|ABJ17027.1| IP12946p [Drosophila melanogaster] gi|194121794|gb|EDW43837.1| GM18969 [Drosophila sechellia] gi|194187326|gb|EDX00910.1| sta [Drosophila yakuba] Length = 270 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 184 >gi|93116060|gb|ABE98693.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 416 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 51/259 (19%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +LL + G R + ++ YI C RN I+D +T+ L+ AL + + + R Sbjct: 12 KLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVGYLICQKSRS 69 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 F+ TK+ + AK + C+N S+W +G TN Sbjct: 70 FFLKTKNFFIYSI--MAKMWS--CINDSQWKIGAFFTNSY-------------------- 105 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 KK R + L PD + ++ +R+ I EA R +IPI ++ Sbjct: 106 -ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEADRSQIPIASL 154 Query: 188 VDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIAR--------QHSYMGAD 236 VD+ L ++Y IP ND R + LF + + I R + Sbjct: 155 VDSTIPWKLDKRINYSIPANDP-MRLVYLFRNSITKTVILERKRITAKNRTPRSHLSSCT 213 Query: 237 TKSAGETVVHSKEGMQLEE 255 KSA ++HS+E E Sbjct: 214 EKSAAGIIIHSREVSSWAE 232 >gi|168043403|ref|XP_001774174.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674442|gb|EDQ60950.1| predicted protein [Physcomitrella patens subsp. patens] Length = 278 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 95/267 (35%), Gaps = 50/267 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ +L + V G +N + +MERY++ R + II++ +T L+ A +VI+ + Sbjct: 4 VQMMLAADVHLGTKN--CDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIA-AIENP 60 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN Sbjct: 61 QDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQ-------------------- 100 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +++ P L+ + D + I EA IP++A Sbjct: 101 -------------------------LQNTFSEPRLLILTDPRTDHQPIMEAALGNIPVIA 135 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 DT+S VD IP N+ SI L+A + + D Sbjct: 136 FCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQMRGTISAAHPWDVMVDLFFYRE 195 Query: 247 SKEGMQLEEDS-QSSESSVLDGQEVAV 272 EG E++ + E + ++ A+ Sbjct: 196 PDEGKDREDEEGAAVEFAAVEYAAPAI 222 >gi|21593022|gb|AAM64971.1| putative 40S ribosomal protein [Arabidopsis thaliana] Length = 280 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 87/258 (33%), Gaps = 56/258 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N MERY+F R+ +II+L +T LQ A +VI + Sbjct: 20 IQMMLSADVHLGTKN--CNYHMERYVFKRRDDGIYIINLGKTWDKLQMAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S S Sbjct: 77 KDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSE------------- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IP +A Sbjct: 124 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT-------KS 239 DT+S VD IP N+ SI L+A + + D + Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYRE 211 Query: 240 AGETVVHSKEGMQLEEDS 257 E E +++ D Sbjct: 212 PEEAKQEGDEEAEVQADY 229 >gi|1345503|emb|CAA61547.1| 40kD protein [Arabidopsis thaliana] gi|2102657|emb|CAA71407.1| unnamed protein product [Arabidopsis thaliana] Length = 298 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 91/275 (33%), Gaps = 53/275 (19%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVIS 60 + + +R + + V G +N N +MERY+F RN +I +L +T LQ A +VI Sbjct: 13 SQKEADVRMMCAAEVHLGTKN--CNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + I+ + + V++ A+ + + + G TN S S Sbjct: 71 -AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSE------- 122 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 P L+ + D + I+E Sbjct: 123 --------------------------------------PRLLILTDPRTDHQPIKEGALG 144 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 IPI+A DT+S VD IP N+ SI L+A + R G Sbjct: 145 NIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQ--MRGTIAAGQKWDVM 202 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + + + ED E+ PE Sbjct: 203 VDLFFYREPDYTKPEDE--DEAGPQAEYGALPAPE 235 >gi|15214300|sp|Q9ZSR8|RSSA_BRANA RecName: Full=40S ribosomal protein SA; AltName: Full=Laminin receptor-like protein; AltName: Full=p40 gi|3769681|gb|AAC97937.1| laminin receptor-like protein [Brassica napus] Length = 292 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 89/264 (33%), Gaps = 49/264 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 ++ + I+ + + V G +N N +MERY+F RN +I +L +T L A +VI Sbjct: 9 LSQKEADIKMMCAAEVHLGTKN--CNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVI 66 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I+ + + V++ A+ + + + G TN S S Sbjct: 67 V-AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSE------ 119 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D + I+E Sbjct: 120 ---------------------------------------PRLLILTDPRTDHQPIKEGAL 140 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IPI+A DT+S VD IP N+ SI L+A + D Sbjct: 141 GNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMV 200 Query: 240 AGETVVHSKEGMQLEEDSQSSESS 263 +E +ED + ++ Sbjct: 201 DLFFYREPEETKPEDEDEVAPQAE 224 >gi|146417344|ref|XP_001484641.1| 40S ribosomal protein S0 [Meyerozyma guilliermondii ATCC 6260] gi|229891603|sp|A5DGG9|RSSA_PICGU RecName: Full=40S ribosomal protein S0 gi|146390114|gb|EDK38272.1| 40S ribosomal protein S0 [Meyerozyma guilliermondii ATCC 6260] Length = 261 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 103/285 (36%), Gaps = 67/285 (23%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + + K Y++ R + ++I++ +T + A + I+ + Sbjct: 15 KLLLAANVHLGSKNVIVHNK--PYVYKTRPDGVNVINIGKTWEKIVLAARTIA-AIPNAA 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVIVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSY------------- 232 D +S D VD IP N+ SI L L+A + GI S Sbjct: 147 TDMDSPTDYVDIAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRSTEWSVMPDLYFYRD 206 Query: 233 -MGADTKSAGETVVHSKEGMQLEEDSQ--SSESSVLDGQEVAVVP 274 + +A ++ E + + S E+ +D E P Sbjct: 207 PEEIEQNAAEDSKAEDAEEAPVADAEPDWSGETEDVDWAESGATP 251 >gi|318087148|gb|ADV40166.1| putative ribosomal protein SA [Latrodectus hesperus] Length = 304 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 98/275 (35%), Gaps = 49/275 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + L S G+ N + +ME+Y+F R + ++I+L +T L A + I Sbjct: 8 LALKDEDVTKFLASSTHIGNEN--LDFQMEQYVFKRRSDGIYLINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADICVISSRPFGQRAVLKFASATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRIDHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A +T+S VD IP N+ + SI L ++A + + D Sbjct: 140 VNIPVIAFCNTDSPLRYVDIAIPCNNKGAHSIGLMWWMLAREVLRMRGTISRELKWDVMV 199 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 ++ + E+ + SE V + ++ P Sbjct: 200 DLYFYRDPEDAEKEEQAAVQSERPVKEAADIQSEP 234 >gi|12249035|dbj|BAB20387.1| stubarista [Drosophila yakuba] Length = 239 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 184 >gi|46138781|ref|XP_391081.1| hypothetical protein FG10905.1 [Gibberella zeae PH-1] Length = 294 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 100/276 (36%), Gaps = 60/276 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + ++I++ +T + A +VI+ + Sbjct: 17 IETLLAAQCHLGSKNLQVH--MENYLWKTRQDGVNVINVGKTWEKIVLAARVIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGATAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG-----------A 235 + DT+S + VD IP N+ +I ++A + ++ Sbjct: 149 LADTDSPTEYVDVAIPTNNKGRHAIGAVWWMLAREVLRLRGTIYNRETPWDVMVDLYFYR 208 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 D ++ E V ++ +E+ ++ S A Sbjct: 209 DPEAEAEDKVEEEKVPGADEEGPAAIESGFQASAGA 244 >gi|15229347|ref|NP_187128.1| RPSAb (40S ribosomal protein SA B); structural constituent of ribosome [Arabidopsis thaliana] gi|73919128|sp|Q8H173|RSSA2_ARATH RecName: Full=40S ribosomal protein Sa-2; AltName: Full=p40 protein homolog gi|6175177|gb|AAF04903.1|AC011437_18 putative 40S ribosomal protein [Arabidopsis thaliana] gi|1498629|gb|AAB67866.1| p40 protein homolog [Arabidopsis thaliana] gi|332640613|gb|AEE74134.1| 40S ribosomal protein Sa-2 [Arabidopsis thaliana] Length = 280 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 88/258 (34%), Gaps = 56/258 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F R+ +II+L +T LQ A +VI + Sbjct: 20 IQMMLSADVHLGTKN--CNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S S Sbjct: 77 KDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSE------------- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IP +A Sbjct: 124 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT-------KS 239 DT+S VD IP N+ SI L+A + + D + Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYRE 211 Query: 240 AGETVVHSKEGMQLEEDS 257 E E +++ D Sbjct: 212 PEEAKQEGDEEAEVQADY 229 >gi|12249039|dbj|BAB20389.1| stubarista [Drosophila orena] Length = 238 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 184 >gi|313226911|emb|CBY22056.1| unnamed protein product [Oikopleura dioica] gi|313246892|emb|CBY35746.1| unnamed protein product [Oikopleura dioica] Length = 289 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 99/272 (36%), Gaps = 52/272 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN--THIIDLSQTVPMLQKALQVISDTVAR 65 IR+++ + V G N + +M +Y+ RN HI +L +T L A + I+ V Sbjct: 15 IRRMIAAKVHLGDVNH--DHRMGQYVHG-RNQAQNHIFNLGKTWEKLMLAARAIAS-VEN 70 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 + ++ K Q +++ A ++ + ++ G TN S R+ Sbjct: 71 PADVAVISGKPQGQRAILKFAAKTGATPIAGRYTPGAFTNQNQSS-----FRE------- 118 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + I E+ + IP++ Sbjct: 119 ---------------------------------PRLLIVTDPRVDHQPITESSYVNIPVI 145 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET-V 244 A+ D++S VD IP N+ + SI L +A + + + + Sbjct: 146 ALCDSDSPSKFVDIAIPCNNKGTHSIGLIWWTLAREVLRLRGTLSRSTEWEREIMPDLFF 205 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 + E ++ +E + + + G+ VP+ Sbjct: 206 YRAPEEIEKQELKEREAAEEVGGETQDYVPDA 237 >gi|12249037|dbj|BAB20388.1| stubarista [Drosophila erecta] Length = 241 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 184 >gi|16603884|gb|AAL27190.1| ribosomal protein subunit 2 [Pterospora andromedea] Length = 119 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +D V+ AA R+ + VN KW+GGM+TNW T Sbjct: 1 FLSEACDLVFDAASVGKQFLIVGTKKIVADLVVRAAIRARCHYVNKKWIGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN 168 + +QK RD E + Q KK+ + ++R+ L GI+ M LPD++ ++D Sbjct: 61 KRLQKFRDVRMEQKMGKLQYLPKKDAVKLKRELSHFMAYLGGIKYMTELPDVVIILDQQ 119 >gi|302495960|ref|XP_003009992.1| hypothetical protein ARB_03803 [Arthroderma benhamiae CBS 112371] gi|291173517|gb|EFE29347.1| hypothetical protein ARB_03803 [Arthroderma benhamiae CBS 112371] Length = 288 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + +L + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 MEMMLTAQCHLGSKNMQTH--MEPYLWKTRPDGVNVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +I L ++A + Sbjct: 149 LCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLR 186 >gi|302656727|ref|XP_003020115.1| hypothetical protein TRV_05889 [Trichophyton verrucosum HKI 0517] gi|291183896|gb|EFE39491.1| hypothetical protein TRV_05889 [Trichophyton verrucosum HKI 0517] Length = 289 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + +L + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 MEMMLTAQCHLGSKNMQTH--MEPYLWKTRPDGVNVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +I L ++A + Sbjct: 149 LCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLR 186 >gi|293694|gb|AAA39413.1| laminin receptor [Mus musculus] Length = 295 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 100/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + +LL +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKLLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLAYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|118793204|ref|XP_320736.3| AGAP011777-PA [Anopheles gambiae str. PEST] gi|229891783|sp|Q7PZ81|RSSA_ANOGA RecName: Full=40S ribosomal protein SA gi|116117266|gb|EAA00413.3| AGAP011777-PA [Anopheles gambiae str. PEST] Length = 285 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 99/265 (37%), Gaps = 53/265 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G + N +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDVTKMLAATTHIG--STSVNFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G + ++++ V++ A + + ++ G TN Sbjct: 66 ASI-EYPGEVFAISSRPYGQRAVLKYAHYTQATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQTTFREPRLLIVTDPLTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A +T+S VD IP N S+ SI L ++A + R + D Sbjct: 140 VNIPVIAFCNTDSPVKFVDIAIPCNTKSTHSIGLMWWMLAREVL----RLRGKITHDRWE 195 Query: 240 AGETVVHSKEGMQLEEDSQSSESSV 264 + ++ + E++ + E++ Sbjct: 196 VMPDLFFFRDPEEAEKEQAAIEAAA 220 >gi|38048381|gb|AAR10093.1| similar to Drosophila melanogaster sta [Drosophila yakuba] Length = 209 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 22 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 79 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ V++ AK + + ++ G TN Sbjct: 80 V-AIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 125 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 126 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 153 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 154 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 198 >gi|296824064|ref|XP_002850542.1| 40S ribosomal protein S0 [Arthroderma otae CBS 113480] gi|269969651|sp|C5FD74|RSSA_NANOT RecName: Full=40S ribosomal protein S0 gi|238838096|gb|EEQ27758.1| 40S ribosomal protein S0 [Arthroderma otae CBS 113480] Length = 290 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + +L + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 MEMMLTAQCHLGSKNMQTH--MEPYLWKTRPDGVNVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +I L ++A + Sbjct: 149 LCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLR 186 >gi|315055725|ref|XP_003177237.1| 40S ribosomal protein S0 [Arthroderma gypseum CBS 118893] gi|311339083|gb|EFQ98285.1| 40S ribosomal protein S0 [Arthroderma gypseum CBS 118893] Length = 289 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + +L + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 MEMMLTAQCHLGSKNMQTH--MEPYLWKTRPDGVNVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +I L ++A + Sbjct: 149 LCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLR 186 >gi|44890755|gb|AAH66941.1| Ribosomal protein SA [Homo sapiens] Length = 295 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 100/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KEG E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEGQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|326474343|gb|EGD98352.1| 40S ribosomal protein S0 [Trichophyton tonsurans CBS 112818] gi|326482504|gb|EGE06514.1| 40S ribosomal protein S0 [Trichophyton equinum CBS 127.97] Length = 289 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + +L + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 MEMMLTAQCHLGSKNMQTH--MEPYLWKTRPDGVNVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +I L ++A + Sbjct: 149 LCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLR 186 >gi|16603882|gb|AAL27189.1| ribosomal protein subunit 2 [Pterospora andromedea] Length = 118 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +D V+ AA R+ + VN KW+GGM+TNW T Sbjct: 1 FLSEACDLVFDAASVGKQFLIVGTKKIVADLVVRAAIRARCHYVNKKWIGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + +QK RD E + Q KK+ + ++R+ L GI+ M LPD++ ++D Sbjct: 61 KRLQKFRDVRMEQKMGKLQYLPKKDAVKLKRELSHFMAYLGGIKYMTELPDVVIILDQ 118 >gi|30679260|ref|NP_850515.1| RPSAb (40S ribosomal protein SA B); structural constituent of ribosome [Arabidopsis thaliana] gi|332640612|gb|AEE74133.1| 40S ribosomal protein Sa-2 [Arabidopsis thaliana] Length = 332 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F R+ +II+L +T LQ A +VI + Sbjct: 20 IQMMLSADVHLGTKN--CNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S S Sbjct: 77 KDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSE------------- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IP +A Sbjct: 124 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L+A + Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQ 189 >gi|291244299|ref|XP_002742035.1| PREDICTED: ribosomal protein SA-like [Saccoglossus kowalevskii] Length = 323 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 98/283 (34%), Gaps = 59/283 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 +AL + + + L +G G N + +ME+Y++ +N +I+++ +T + A + I Sbjct: 8 LALKEEDVTKFLAAGSHLGSTNV--DFQMEQYVYKRKNDGMYIMNIRKTWEKILIAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++ + +++ A + V ++ G TN Sbjct: 66 V-AIENPSDVCVISARPYGQRAILKFATHTGASPVAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P ++ V D + I EA Sbjct: 112 --------------------------------IQAAYREPRILVVTDPRTDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + IP++A +T+S VD VIP N+ + SI L ++ + G + Sbjct: 140 VNIPVIAFCNTDSPLRYVDIVIPCNNKGANSIGLMWWFLSREVLRMRGTISREVPWDIMP 199 Query: 236 ------DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 D + + + E EE + + + GQ V Sbjct: 200 DLYFYRDPEEVEKEEQAALEKATKEEPAAAPYADQWGGQPATV 242 >gi|300176696|emb|CBK24361.2| unnamed protein product [Blastocystis hominis] Length = 243 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +R++L + +G +N N M+ Y+F + HII+L++T L A ++I + Sbjct: 7 VRKMLVARAHYGTKN--LNFMMKDYVFRRTKEGVHIINLAKTWEKLVLAARMIV-AIEHP 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ + + + V++ K + ++ ++ G TN T ++ R+ Sbjct: 64 EDVIVIGARENSQRAVLKFCKYTGCQTISGRYTPGTFTNQIT-----KQFRE-------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D +K AI EA + IP +A Sbjct: 111 --------------------------------PRLLIVTDPRFDKQAIHEAACVNIPTIA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S + VD IP N ++ SI L +A + Sbjct: 139 FCDTDSPLEYVDCAIPCNTKNNYSIGLMMWFLAREVLR 176 >gi|327307012|ref|XP_003238197.1| 40S ribosomal protein S0 [Trichophyton rubrum CBS 118892] gi|326458453|gb|EGD83906.1| 40S ribosomal protein S0 [Trichophyton rubrum CBS 118892] Length = 289 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + +L + G +N + ME Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 MEMMLTAQCHLGSKNMQTH--MEPYLWKTRPDGVNVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +I L ++A + Sbjct: 149 LCDADSPTEFVDVAIPTNNKGRHAIGLVWWMLAREVLR 186 >gi|148233658|ref|NP_001089106.1| 40S ribosomal protein SA [Xenopus laevis] gi|123918051|sp|Q3ZM03|RSSA_XENLA RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|58003510|gb|AAW62261.1| 67kD laminin receptor precursor [Xenopus laevis] gi|114108053|gb|AAI23145.1| LOC733335 protein [Xenopus laevis] Length = 306 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A S + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + IP +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A V E Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKATTKEE--FQGEWTAPVAE 237 >gi|194763916|ref|XP_001964078.1| GF21363 [Drosophila ananassae] gi|229891598|sp|B3MRX2|RSSA_DROAN RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|190619003|gb|EDV34527.1| GF21363 [Drosophila ananassae] Length = 270 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +II+L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIDNASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 184 >gi|211939941|gb|ACJ13448.1| laminin receptor [Rattus norvegicus] Length = 295 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWVLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|331223821|ref|XP_003324583.1| 40S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303573|gb|EFP80164.1| 40S ribosomal protein S2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 368 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N MERY++ R + ++I++ T L A ++I+ + Sbjct: 89 ISLLLAAQCHIGSKN--CTKGMERYVYKRRADGVNVINIGHTWEKLIMAARIIT-AIENP 145 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 146 NDVCVISARPYGHRAVLKFAANTGAQAIAGRFTPGNFTNYIT-----RSFKE-------- 192 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 193 --------------------------------PRLIVVTDPRLDAQAIREASYVNIPVIA 220 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+++ + VD IP N+ S+ L L+ + Sbjct: 221 LCDTDASLNFVDVAIPTNNKGKHSVGLIWWLLCREVLR 258 >gi|291400114|ref|XP_002716404.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQTAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|213405829|ref|XP_002173686.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] gi|269969622|sp|B6K2L2|RSSA3_SCHJY RecName: Full=40S ribosomal protein S0-C gi|212001733|gb|EEB07393.1| 40S ribosomal protein S0-A [Schizosaccharomyces japonicus yFS275] Length = 289 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+QLL + G +N +ME Y++ R + +II++ +T + A ++I+ TV Sbjct: 18 IKQLLAASCHIGSKNLEI--RMENYVWKRRADGVNIINIGKTWEKIVLAARIIA-TVENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V+++ V++ A + + ++ G TN+ T + R+ Sbjct: 75 ADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RTFRE-------- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ D + AI+EA + IP++A Sbjct: 122 --------------------------------PRLIIATDPRADAQAIKEASYVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S VD IP N+ +SI L L+A + Sbjct: 150 LCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLAREVLR 187 >gi|195622050|gb|ACG32855.1| 40S ribosomal protein SA [Zea mays] Length = 308 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 96/269 (35%), Gaps = 56/269 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + + ERY+F R + +II+L +T LQ A VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQTERYVFKRRSDGIYIINLGKTWDKLQLAAXVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 DT+S VD IP N+ SI L++ + R G + + + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLSRMVLQ--MRGTILPGHKWEVMVDLFFY 209 Query: 247 SKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 E+++ Z V E A + + Sbjct: 210 RD-----PEEAKEQZEEVAAAPEFAAITD 233 >gi|156089135|ref|XP_001611974.1| 40S ribosomal protein S2 [Babesia bovis T2Bo] gi|154799228|gb|EDO08406.1| 40S ribosomal protein S2, putative [Babesia bovis] Length = 273 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 50/261 (19%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +IR +L V G +N KM+ Y+F + H+IDLS T+ ++ A + I V Sbjct: 16 SIRMMLTCKVHIGTKNV--ENKMKNYVFTRTQEGVHLIDLSWTLKKIKLAARAIV-AVTN 72 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V+ + S +++ + + W+ G +TN T Sbjct: 73 PAEVVVVSARPYGSRAILKFSHYVGSQPIAGSWVPGTLTNQITQKFIE------------ 120 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P LM D + A++E+ + +P++ Sbjct: 121 ---------------------------------PRLMIATDPRTDAQALKESSYVNVPVI 147 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 A+ DT+S VD IP N+ +SIAL L+A + + Q Sbjct: 148 ALCDTDSPLQFVDIAIPCNNKGKKSIALMYWLLAREVLY-LRNQIQRHLPWEIMVDTFFW 206 Query: 246 HSKEGMQLEEDSQSSESSVLD 266 E M+L+ + Q E ++ Sbjct: 207 RDAEQMELKAEEQKREEAMSS 227 >gi|171948782|gb|ACB59248.1| laminin receptor [Mus musculus] Length = 295 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 100/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + GI + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGIISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|34500109|gb|AAQ73638.1| ribosome-associated protein RAP1-like protein [Epichloe festucae] Length = 205 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 83/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + +II++ +T + A ++I + Sbjct: 17 IEMLLAAQTHVGSKNLQVH--MEPYLWKTRADGVNIINIGKTWEKIVLAARIIV-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHIGASSIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S+ + VD IP N+ +I L+A + Sbjct: 149 LCDTDSSTEYVDVAIPTNNKGRHAIGTIWWLLAREVLR 186 >gi|73989790|ref|XP_860646.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 11 [Canis familiaris] Length = 310 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|195611912|gb|ACG27786.1| 40S ribosomal protein SA [Zea mays] Length = 307 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + ++ERY++ R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQVERYVYKRRTDGIYIINLGKTWDKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +SI L+A + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 189 >gi|194706686|gb|ACF87427.1| unknown [Zea mays] Length = 307 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + ++ERY++ R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQVERYVYKRRTDGIYIINLGKTWDKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +SI L+A + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 189 >gi|34305123|gb|AAQ63482.1| laminin-binding protein [Acanthamoeba healyi] Length = 256 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++++L + V G N +PKMERY++ R + H+IDL +T L A +VI+ Sbjct: 2 VQKMLAAEVHIGSNN--LDPKMERYVWRRRQDGVHLIDLGKTWDKLILAARVIAGI-EHP 58 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ ++ V + A + + ++ G TN RD +E Sbjct: 59 SDICIISGRTYGQRAVHKFANFTGTTAIAGRFTPGTFTNQIQQ-------RDFKE----- 106 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV- 185 P L+ V D + A+ EA + IP + Sbjct: 107 --------------------------------PRLIVVADPRVDHQALTEASYVNIPTIA 134 Query: 186 -AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 A +T+S VD IP N+ S +I L L+A Sbjct: 135 FAFANTDSPLRHVDIAIPCNNGSKHAIGLMFWLLAREI 172 >gi|92429564|gb|ABD93526.2| mitochondrial small ribosomal subunit protein [Nicotiana tomentosiformis] Length = 171 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 38/206 (18%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + K+ Y RN IID +T+ L+ A I + V R Sbjct: 1 QKLLSTNAHLGRRVAAHHFKI--YSCGSRNAMTIIDSDKTLICLRNACSFIGELVRNRAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 +FV T + + + + K S LGG +TN + + + Sbjct: 59 FIFVNTNTLFDEIIDQMTKTIGCRNDTSWRLGGFLTNSSSPRK---------------FR 103 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 G KK L + PD + + DT R+ IQEA +L+IPIV +V Sbjct: 104 GRNKKLNLAAVQP-----------------PDCVVIFDTERKSSVIQEAAKLQIPIVGLV 146 Query: 189 DTNSNPD---LVDYVIPGNDDSSRSI 211 D++ D + Y +P ND S + + Sbjct: 147 DSSMPWDIYKKITYPVPAND-SVQFV 171 >gi|30047125|gb|AAH50688.1| Ribosomal protein SA [Homo sapiens] Length = 295 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQATFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|308081909|ref|NP_001007824.1| 40S ribosomal protein SA [Gallus gallus] gi|326922143|ref|XP_003207311.1| PREDICTED: 40S ribosomal protein SA-like [Meleagris gallopavo] gi|1710781|sp|P50890|RSSA_CHICK RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|1149509|emb|CAA64147.1| 37kD Laminin receptor precursor /p40 ribosomal associated protein [Gallus gallus] Length = 296 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 108/289 (37%), Gaps = 67/289 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ + S+ L ++A + I+R+H Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 + + ++A E V +KE Q E + + E + EVA Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAV-TKEEFQTEWTAPAPEFTAPPQPEVA 247 >gi|224045519|ref|XP_002198906.1| PREDICTED: putative laminin receptor 1 [Taeniopygia guttata] gi|229891612|sp|B5FXT6|RSSA_TAEGU RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|197127349|gb|ACH43847.1| putative laminin receptor 1 [Taeniopygia guttata] gi|197127351|gb|ACH43849.1| putative laminin receptor 1 [Taeniopygia guttata] gi|197127352|gb|ACH43850.1| putative laminin receptor 1 [Taeniopygia guttata] gi|296399394|gb|ADH10516.1| ribosomal protein SA [Zonotrichia albicollis] gi|296399428|gb|ADH10545.1| ribosomal protein SA [Zonotrichia albicollis] Length = 296 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 108/289 (37%), Gaps = 67/289 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ + S+ L ++A + I+R+H Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVA 271 + + ++A E V +KE Q E + + E + EVA Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAV-TKEEFQTEWTAPAPEFTAPPQPEVA 247 >gi|12846904|dbj|BAB27355.1| unnamed protein product [Mus musculus] Length = 295 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 99/282 (35%), Gaps = 59/282 (20%) Query: 1 MALPQFTIRQLLESGVQFG--HRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQ 57 + + + + + L +G G H + +ME+YI+ + + +II+L +T L A + Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTH----LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAAR 63 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 I + + +++++ V++ A + + ++ G TN Sbjct: 64 AIV-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ----------- 111 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 I+ P L+ V D + + EA Sbjct: 112 ----------------------------------IQAAFREPRLLVVTDPRADHQPLTEA 137 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 138 SYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEV 197 Query: 236 --DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 198 MPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|17298117|dbj|BAB78527.1| ribosome-associated protein P40 [Bombyx mori] Length = 312 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 104/277 (37%), Gaps = 55/277 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N N ++E Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLGAENV--NFQVETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V+D ++ I EA Sbjct: 112 --------------------------------IQAAFREPRLLIVLDPAQDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT 237 + IP++A+ +T+S VD IP N SS SI L L+A + G+ + Sbjct: 140 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDV-- 197 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 + + +++ Q+ E +V+ + V P Sbjct: 198 --VVDLFFYRDPEESEKDEQQAKEQAVVPAKPEVVAP 232 >gi|16603878|gb|AAL27187.1| ribosomal protein subunit 2 [Pterospora andromedea] gi|16603880|gb|AAL27188.1| ribosomal protein subunit 2 [Pterospora andromedea] Length = 118 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ D + G + L V TK +D V+ AA R+ + VN KW+GGM+TNW T Sbjct: 1 FLSEACDLVFDAASVGKQFLIVGTKKIVADLVVRAAIRARCHYVNKKWIGGMLTNWSTTE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + +QK RD E + Q KK+ ++R+ L GI+ M LPD++ ++D Sbjct: 61 KRLQKFRDVRMEQKMGKLQYLPKKDAGKLKRELSHFMAYLGGIKYMTELPDVVIILDQ 118 >gi|47125390|gb|AAH70263.1| Ribosomal protein SA [Homo sapiens] Length = 295 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLSEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|147902645|ref|NP_001080730.1| ribosomal protein SA [Xenopus laevis] gi|28277316|gb|AAH46271.1| Lamr1-prov protein [Xenopus laevis] Length = 306 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A S + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + IP +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A V E Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKATTKEE--FQGEWTAPVAE 237 >gi|85082069|ref|XP_956840.1| 40S ribosomal protein S0 [Neurospora crassa OR74A] gi|30316337|sp|Q01291|RS0_NEUCR RecName: Full=40S ribosomal protein S0; AltName: Full=Ribosome-associated protein 1 gi|18376365|emb|CAD21142.1| ribosome-associated protein (Rap-1) [Neurospora crassa] gi|28917919|gb|EAA27604.1| 40S ribosomal protein S0 [Neurospora crassa OR74A] Length = 290 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N + M+ Y++ R + +I+++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHIGSKNLGVH--MQPYLWKTRADGVNILNVGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +I ++A + Sbjct: 149 LCDADSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLR 186 >gi|148680000|gb|EDL11947.1| mCG2650 [Mus musculus] Length = 295 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LKMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|327278514|ref|XP_003224007.1| PREDICTED: 40S ribosomal protein SA-like [Anolis carolinensis] Length = 296 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + IP +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|80971504|ref|NP_001032223.1| 40S ribosomal protein SA [Sus scrofa] gi|122069666|sp|Q4GWZ2|RSSA_PIG RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|71057496|emb|CAJ18354.1| ribosomal protein SA [Sus scrofa] Length = 295 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|30585305|gb|AAP36925.1| Homo sapiens laminin receptor 1 (ribosomal protein SA, 67kDa) [synthetic construct] gi|61370578|gb|AAX43519.1| laminin receptor 1 [synthetic construct] gi|61370584|gb|AAX43520.1| laminin receptor 1 [synthetic construct] Length = 296 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|122066007|sp|P26452|RSSA_BOVIN RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40; AltName: Full=Protein C10 gi|187609256|pdb|2ZKQ|BB Chain b, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map gi|73587277|gb|AAI02491.1| Ribosomal protein SA [Bos taurus] gi|291508577|gb|ADE09296.1| ribosomal protein SA [Ovis aries] gi|296475010|gb|DAA17125.1| 40S ribosomal protein SA [Bos taurus] gi|298108676|gb|ADI56590.1| laminin receptor 1 [Capra hircus] Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|157426925|ref|NP_001098733.1| 40S ribosomal protein SA [Ovis aries] gi|206558282|sp|A6YRY8|RSSA_SHEEP RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|150021840|gb|ABR57322.1| laminin receptor 1 [Ovis aries] Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|221139852|ref|NP_001137423.1| laminin receptor 1 [Equus caballus] gi|57101392|ref|XP_533909.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 1 [Canis familiaris] gi|57103528|ref|XP_534228.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 1 [Canis familiaris] gi|73989780|ref|XP_850029.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 2 [Canis familiaris] gi|73989793|ref|XP_860712.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 12 [Canis familiaris] gi|73989795|ref|XP_860746.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 13 [Canis familiaris] gi|73989797|ref|XP_860784.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 14 [Canis familiaris] gi|126341360|ref|XP_001368957.1| PREDICTED: similar to laminin receptor [Monodelphis domestica] gi|291392837|ref|XP_002712810.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] gi|291393283|ref|XP_002713144.1| PREDICTED: ribosomal protein SA [Oryctolagus cuniculus] gi|301785884|ref|XP_002928357.1| PREDICTED: 40S ribosomal protein SA-like [Ailuropoda melanoleuca] gi|78157165|gb|ABB22830.1| laminin receptor 1 [Equus caballus] gi|281352828|gb|EFB28412.1| hypothetical protein PANDA_018283 [Ailuropoda melanoleuca] gi|327239234|gb|AEA39484.1| ribosomal protein SA [Ailuropoda melanoleuca] gi|327239328|gb|AEA39531.1| ribosomal protein SA [Ailuropoda melanoleuca] Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|149241133|ref|XP_001526275.1| 40S ribosomal protein S0 [Lodderomyces elongisporus NRRL YB-4239] gi|229891589|sp|A5DZP6|RSSA_LODEL RecName: Full=40S ribosomal protein S0 gi|146450398|gb|EDK44654.1| 40S ribosomal protein S0 [Lodderomyces elongisporus NRRL YB-4239] Length = 261 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + K Y++ R + +II++ +T + A ++I+ V Sbjct: 15 KLLLAANVHLGSKNVQVHNK--PYVYKTRPDGVNIINIGKTWEKIVLAARIIA-AVPNSS 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVIVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L+A + Sbjct: 147 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183 >gi|8393693|ref|NP_058834.1| 40S ribosomal protein SA [Rattus norvegicus] gi|730681|sp|P38983|RSSA_RAT RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|466439|dbj|BAA04953.1| 40kDa ribosomal protein [Rattus norvegicus] gi|38014840|gb|AAH60578.1| Ribosomal protein SA [Rattus norvegicus] gi|149018238|gb|EDL76879.1| rCG25653, isoform CRA_b [Rattus norvegicus] gi|741364|prf||2007254A ribosomal protein S2 Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|9845502|ref|NP_002286.2| 40S ribosomal protein SA [Homo sapiens] gi|59859885|ref|NP_001012321.1| 40S ribosomal protein SA [Homo sapiens] gi|114586101|ref|XP_001172054.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pan troglodytes] gi|114586103|ref|XP_001172067.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pan troglodytes] gi|114602566|ref|XP_001158586.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 4 [Pan troglodytes] gi|114602568|ref|XP_001158652.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 5 [Pan troglodytes] gi|114602570|ref|XP_001158709.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 6 [Pan troglodytes] gi|114602572|ref|XP_001158768.1| PREDICTED: 40S ribosomal protein SA-like isoform 7 [Pan troglodytes] gi|297671668|ref|XP_002813955.1| PREDICTED: 40S ribosomal protein SA-like [Pongo abelii] gi|332215597|ref|XP_003256931.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Nomascus leucogenys] gi|332215599|ref|XP_003256932.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Nomascus leucogenys] gi|332215601|ref|XP_003256933.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Nomascus leucogenys] gi|332816451|ref|XP_003309753.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] gi|332816453|ref|XP_003309754.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] gi|332816455|ref|XP_003309755.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] gi|332816457|ref|XP_003309756.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] gi|332816459|ref|XP_003309757.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] gi|125969|sp|P08865|RSSA_HUMAN RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Colon carcinoma laminin-binding protein; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40; AltName: Full=Multidrug resistance-associated protein MGr1-Ag; AltName: Full=NEM/1CHD4 gi|20977170|gb|AAM33304.1|AF503367_1 multidrug resistance-associated protein MGr1-Ag [Homo sapiens] gi|307105|gb|AAA36161.1| laminin-binding protein [Homo sapiens] gi|1302648|gb|AAC50652.1| 37 kD laminin receptor precursor/p40 ribosome associated protein [Homo sapiens] gi|13529269|gb|AAH05391.1| Ribosomal protein SA [Homo sapiens] gi|14250794|gb|AAH08867.1| Ribosomal protein SA [Homo sapiens] gi|14714564|gb|AAH10418.1| Ribosomal protein SA [Homo sapiens] gi|16307602|gb|AAH13827.1| Ribosomal protein SA [Homo sapiens] gi|21961580|gb|AAH34537.1| Ribosomal protein SA [Homo sapiens] gi|30583277|gb|AAP35883.1| laminin receptor 1 (ribosomal protein SA, 67kDa) [Homo sapiens] gi|31419811|gb|AAH53370.1| Ribosomal protein SA [Homo sapiens] gi|38541669|gb|AAH62714.1| Ribosomal protein SA [Homo sapiens] gi|45786148|gb|AAH68062.1| Ribosomal protein SA [Homo sapiens] gi|47938375|gb|AAH71969.1| Ribosomal protein SA [Homo sapiens] gi|47939530|gb|AAH71693.1| Ribosomal protein SA [Homo sapiens] gi|47939621|gb|AAH71968.1| Ribosomal protein SA [Homo sapiens] gi|48734781|gb|AAH71970.1| Ribosomal protein SA [Homo sapiens] gi|49522879|gb|AAH73863.1| Ribosomal protein SA [Homo sapiens] gi|61360849|gb|AAX41938.1| laminin receptor 1 [synthetic construct] gi|77748406|gb|AAI07568.1| Ribosomal protein SA [Homo sapiens] gi|119584986|gb|EAW64582.1| ribosomal protein SA, isoform CRA_a [Homo sapiens] gi|119584987|gb|EAW64583.1| ribosomal protein SA, isoform CRA_a [Homo sapiens] gi|119584988|gb|EAW64584.1| ribosomal protein SA, isoform CRA_a [Homo sapiens] gi|119584990|gb|EAW64586.1| ribosomal protein SA, isoform CRA_a [Homo sapiens] gi|123980486|gb|ABM82072.1| ribosomal protein SA [synthetic construct] gi|123995301|gb|ABM85252.1| ribosomal protein SA [synthetic construct] gi|208967338|dbj|BAG73683.1| ribosomal protein SA [synthetic construct] Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|306518599|ref|NP_001182409.1| hypothetical protein LOC693293 [Macaca mulatta] gi|296208011|ref|XP_002750894.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Callithrix jacchus] gi|296208013|ref|XP_002750895.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Callithrix jacchus] gi|296208015|ref|XP_002750896.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Callithrix jacchus] gi|296228410|ref|XP_002759791.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Callithrix jacchus] gi|296228412|ref|XP_002759792.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Callithrix jacchus] gi|122069662|sp|Q2L9X0|RSSA_CERAE RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|85062814|gb|ABC69238.1| laminin receptor 1 [Chlorocebus aethiops] gi|90075168|dbj|BAE87264.1| unnamed protein product [Macaca fascicularis] Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|45360789|ref|NP_989068.1| 40S ribosomal protein SA [Xenopus (Silurana) tropicalis] gi|82202482|sp|Q6P8D1|RSSA_XENTR RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|38174038|gb|AAH61298.1| ribosomal protein SA [Xenopus (Silurana) tropicalis] gi|89272463|emb|CAJ82410.1| ribosomal protein SA [Xenopus (Silurana) tropicalis] gi|197246801|gb|AAI68799.1| ribosomal protein SA [Xenopus (Silurana) tropicalis] Length = 306 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 102/279 (36%), Gaps = 53/279 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A S + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP +A+ +T+S VD IP N+ + S+ L ++A + + S Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR-MRGTISREHPWEVM 198 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + +++ + G+ A V E Sbjct: 199 PDLYFYRDPEEIEKEEQAAAEKATTKEEYQGEWTAPVAE 237 >gi|261201053|ref|XP_002626927.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis SLH14081] gi|269969624|sp|C5G8P1|RSSA_AJEDR RecName: Full=40S ribosomal protein S0 gi|269969625|sp|C5JKQ2|RSSA_AJEDS RecName: Full=40S ribosomal protein S0 gi|239593999|gb|EEQ76580.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis SLH14081] gi|239607128|gb|EEQ84115.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis ER-3] gi|327351079|gb|EGE79936.1| 40S ribosomal protein S0 [Ajellomyces dermatitidis ATCC 18188] Length = 301 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + M+ Y++ R + ++I++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MDPYLWKTRPDGINVINIGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADVCVISARPYGQRAVLKFAAHTGAAAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDHQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I L ++A + Sbjct: 149 LCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLR 186 >gi|166952385|gb|ABZ04275.1| ribosomal protein rpsA [Lineus viridis] Length = 240 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 81/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + + L G + +M+ Y++ + + HII+L +T L A + I Sbjct: 8 LALKEEDVTKFLACSTHLGANTX--DFQMDAYVYKCKSDGVHIINLRKTWEKLLMAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + ++ + V++ A + + ++ G TN Sbjct: 66 A-AIENPADVCVISARPYGQRAVLKFASATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + +QEA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRTDHQPVQEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ SI L ++A + Sbjct: 140 VNIPVIALCNTDSPLKYVDIAIPCNNKGPHSIGLMWWMLAREVLR 184 >gi|332816461|ref|XP_003309758.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] Length = 269 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|26350123|dbj|BAC38701.1| unnamed protein product [Mus musculus] Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|296198405|ref|XP_002746694.1| PREDICTED: 40S ribosomal protein SA-like [Callithrix jacchus] Length = 300 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 13 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 70 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 71 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGNFTNL------------- 116 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 117 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 144 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 145 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 204 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 205 DLYFYRDPEETEKEEQAAAEKAVTKEE--FQGEWTAPAPE 242 >gi|148237408|ref|NP_001091273.1| hypothetical protein LOC100037080 [Xenopus laevis] gi|224994260|ref|NP_035159.3| 40S ribosomal protein SA [Mus musculus] gi|309264022|ref|XP_003086186.1| PREDICTED: 40S ribosomal protein SA-like [Mus musculus] gi|146345507|sp|P14206|RSSA_MOUSE RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37 kDa oncofetal antigen; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40; AltName: Full=OFA/iLRP gi|4633839|gb|AAD26866.1|AF140348_1 37kDa oncofetal antigen [Mus musculus] gi|52853|emb|CAA29696.1| unnamed protein product [Mus musculus] gi|12845855|dbj|BAB26926.1| unnamed protein product [Mus musculus] gi|12846797|dbj|BAB27306.1| unnamed protein product [Mus musculus] gi|12846900|dbj|BAB27353.1| unnamed protein product [Mus musculus] gi|13277921|gb|AAH03829.1| Ribosomal protein SA [Mus musculus] gi|23336977|gb|AAH37195.1| Ribosomal protein SA [Mus musculus] gi|26354082|dbj|BAC40671.1| unnamed protein product [Mus musculus] gi|33417033|gb|AAH55886.1| Rpsa protein [Mus musculus] gi|51980611|gb|AAH81461.1| Ribosomal protein SA [Mus musculus] gi|54038379|gb|AAH84677.1| Ribosomal protein SA [Mus musculus] gi|63102306|gb|AAH94902.1| Ribosomal protein SA [Mus musculus] gi|68534141|gb|AAH99601.1| Ribosomal protein SA [Mus musculus] gi|74137678|dbj|BAE35867.1| unnamed protein product [Mus musculus] gi|74140915|dbj|BAE22057.1| unnamed protein product [Mus musculus] gi|74141230|dbj|BAE35924.1| unnamed protein product [Mus musculus] gi|74177710|dbj|BAE38953.1| unnamed protein product [Mus musculus] gi|74183236|dbj|BAE22550.1| unnamed protein product [Mus musculus] gi|74184937|dbj|BAE39085.1| unnamed protein product [Mus musculus] gi|74189026|dbj|BAE39278.1| unnamed protein product [Mus musculus] gi|74222339|dbj|BAE38083.1| unnamed protein product [Mus musculus] gi|82571476|gb|AAI10286.1| Ribosomal protein SA [Mus musculus] gi|86374233|gb|ABC95972.1| ribosomal protein SA [Mus musculus] gi|86374239|gb|ABC95977.1| ribosomal protein SA [Mus musculus] gi|122936400|gb|AAI30139.1| LOC100037080 protein [Xenopus laevis] gi|122936440|gb|AAI30160.1| LOC100037080 protein [Xenopus laevis] gi|148669912|gb|EDL01859.1| mCG122533 [Mus musculus] gi|148677235|gb|EDL09182.1| mCG117046 [Mus musculus] gi|228997|prf||1815216A laminin receptor Length = 295 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|195162173|ref|XP_002021930.1| GL14373 [Drosophila persimilis] gi|198470906|ref|XP_001355430.2| GA13249 [Drosophila pseudoobscura pseudoobscura] gi|229891602|sp|B4GTK1|RSSA_DROPE RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891759|sp|Q29J14|RSSA_DROPS RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|194103828|gb|EDW25871.1| GL14373 [Drosophila persimilis] gi|198145676|gb|EAL32488.2| GA13249 [Drosophila pseudoobscura pseudoobscura] Length = 270 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +II+L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPMTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S+ SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 184 >gi|38047861|gb|AAR09833.1| similar to Drosophila melanogaster sta [Drosophila yakuba] Length = 193 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I + Sbjct: 4 ITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIV-AIDNP 60 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++++ V++ AK + + ++ G TN Sbjct: 61 SDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ-------------------- 100 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 I+ P L+ V D N + I EA + IP++A Sbjct: 101 -------------------------IQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIA 135 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +T+S +D IP N+ S+ SI L L+A + Sbjct: 136 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 173 >gi|148691799|gb|EDL23746.1| mCG68071 [Mus musculus] Length = 295 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEGVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGLMWWMLAREVLCMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEETEKEEQAAAEKAVTEEE--FQGEWTAPAPE 237 >gi|159489000|ref|XP_001702485.1| ribosomal protein Sa, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii] gi|229891583|sp|A8IB25|RSSA_CHLRE RecName: Full=40S ribosomal protein SA gi|158280507|gb|EDP06264.1| ribosomal protein Sa [Chlamydomonas reinhardtii] Length = 279 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 84/227 (37%), Gaps = 51/227 (22%) Query: 1 MALPQ--FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQ 57 MAL Q I+ +L + G +N + +MERY++ R + +II+L +T LQ A + Sbjct: 1 MALSQKEQDIQMMLAAQCHLGTKN--CHYQMERYMYRRRQDGIYIINLEKTYEKLQMAAR 58 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 +I + I ++ + V + A+ + + G TN Sbjct: 59 IIV-AIENPQDICVLSARPYGQRAVFKFAQYLGCKSMAGRHTPGTFTNQ----------- 106 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 I+ P L+ + D + ++E+ Sbjct: 107 ----------------------------------IQKAFEEPRLLILTDPRTDHQPVKES 132 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP +A DT+S VD IP N+ SI + L+A ++ Sbjct: 133 SYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLE 179 >gi|226005|prf||1405340A protein 40kD Length = 295 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|62024907|gb|AAH92041.1| Ribosomal protein SA [Mus musculus] Length = 295 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|18700176|gb|AAL77699.1| AT3g04770/F7O18_26 [Arabidopsis thaliana] Length = 332 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F R+ +II+L +T LQ A +VI + Sbjct: 20 IQIMLSADVHLGTKN--CNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S S Sbjct: 77 KDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSE------------- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IP +A Sbjct: 124 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L+A + Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQ 189 >gi|23308301|gb|AAN18120.1| At3g04770/F7O18_26 [Arabidopsis thaliana] Length = 332 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N N +MERY+F R+ +II+L +T LQ A +VI + Sbjct: 20 IQIMLSADVHLGTKN--CNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN S S Sbjct: 77 KDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSE------------- 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I+E IP +A Sbjct: 124 --------------------------------PRLLILTDPRTDHQPIKEGALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L+A + Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQ 189 >gi|146104702|ref|XP_001469893.1| 40S ribosomal protein SA [Leishmania infantum] gi|146104747|ref|XP_001469903.1| 40S ribosomal protein SA [Leishmania infantum] gi|229891588|sp|A4IDS4|RSSA_LEIIN RecName: Full=40S ribosomal protein SA gi|134074263|emb|CAM73007.1| putative 40S ribosomal protein SA [Leishmania infantum JPCM5] gi|134074273|emb|CAM73018.1| putative 40S ribosomal protein SA [Leishmania infantum JPCM5] Length = 246 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + ++LL G RN M++YI+ +HIIDL L A +VI Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQS--SAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +++ + + + ++ +++ G TN Sbjct: 69 A-AVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQ----------- 116 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 KK P ++ V D + AI+EA Sbjct: 117 ------------KKFVQ----------------------PRVLVVTDPRTDHQAIREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ + VD IP N+ +SI + L+A + Sbjct: 143 VNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLR 187 >gi|123439029|ref|XP_001310290.1| ribosomal protein [Trichomonas vaginalis G3] gi|121892054|gb|EAX97360.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 255 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 49/221 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + I+ +L + V G N + M+ Y+F R TH+I+L+ T ++ A ++I V Sbjct: 9 EAVIKMMLAAKVYLGSTNLSF--GMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIF-AV 65 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +L ++TKS + V + A+ V ++ G+ TN+ Sbjct: 66 EEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYS---------------- 109 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 I++ P LM V D N + A+ EA IP Sbjct: 110 ----------------------------IKNFCE-PRLMIVCDPNTDSQAVHEAAYANIP 140 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +A+ DT+++ D VD VIP N + S+ L L+ + Sbjct: 141 CIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLR 181 >gi|114579031|ref|XP_001154496.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] Length = 295 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLHYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|195133874|ref|XP_002011364.1| GI16040 [Drosophila mojavensis] gi|195399450|ref|XP_002058333.1| GJ15549 [Drosophila virilis] gi|229891601|sp|B4L760|RSSA_DROMO RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|229891616|sp|B4MB32|RSSA_DROVI RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|193907339|gb|EDW06206.1| GI16040 [Drosophila mojavensis] gi|194150757|gb|EDW66441.1| GJ15549 [Drosophila virilis] Length = 271 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y+F R + +II+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLR 184 >gi|195060376|ref|XP_001995792.1| GH17574 [Drosophila grimshawi] gi|229891600|sp|B4JXG8|RSSA_DROGR RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|193896578|gb|EDV95444.1| GH17574 [Drosophila grimshawi] Length = 272 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y+F R + +II+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D N + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPNTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLR 184 >gi|209916096|gb|ACI95891.1| ribosomal protein S2 [Isoetes engelmannii] gi|217331583|gb|ACK38309.1| ribosomal protein S2 [Isoetes engelmannii] gi|241912115|gb|ACS71778.1| ribosomal protein S2 [Isoetes engelmannii] Length = 232 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 31/221 (14%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 R L + GHR I ++++ I+ + +T+ ++A I+ + G Sbjct: 12 RSLPSTHAYLGHR-----------IPIFKDSSEILQIEKTLICSRRARNPIAPIIRGEGH 60 Query: 69 ILFVATK--SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + V S V AKR+ Q ++ +W+GG+ NW+ + +L Sbjct: 61 FVSVNANANKVYSKIVQGTAKRTNQSYIDHEWIGGVSINWEHM----------IDLQKHG 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + T L+ R K+K L GI +P+ V++ N +AI EA + RI IV Sbjct: 111 DDALTSSPFLDYLR---KMKNCLGGIMT-HRIPNRSVVMNANPSSMAILEADQSRISIVF 166 Query: 187 VVDTNSN---PDLVDYVIPGND-DSSRSIALFCDLVASAAI 223 +VD + +L+ Y IP ND DS + + LF + V I Sbjct: 167 LVDCHIPNGLHELITYPIPVNDYDSIQFVYLFRNSVTKTVI 207 >gi|115278624|ref|YP_762505.1| ribosomal protein S2 [Tripsacum dactyloides] gi|114432115|gb|ABI74664.1| ribosomal protein S2 [Tripsacum dactyloides] Length = 559 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 40/244 (16%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALNFLG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G +TN Sbjct: 59 YLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFLTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 N ++ R + K+ G + PD + ++ +R+ I EA Sbjct: 104 -----------------ANPKKFRSRNKKIYFG---LNRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + I ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTVILERQKRTAINGPRA 203 Query: 238 KSAG 241 + G Sbjct: 204 GARG 207 >gi|156548613|ref|XP_001608082.1| PREDICTED: similar to putative 40S ribosomal protein SA [Nasonia vitripennis] Length = 317 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 80/227 (35%), Gaps = 51/227 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER---NNTHIIDLSQTVPMLQKALQ 57 +AL + + ++L + G N +ME+Y++ R +II+L +T L A + Sbjct: 8 LALKEDDVTKMLTASTHLG--TENVNFQMEQYVYKRRVDGAGINIINLRRTWEKLLLAAR 65 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 I + + ++ + V++ A + + ++ G TN Sbjct: 66 AIV-AIEHPSEVFVISCRPYGQRAVLKFAAHTGATPIAGRFTPGAFTNQ----------- 113 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 I+ P L+ V D + I EA Sbjct: 114 ----------------------------------IQAAFREPRLLIVTDPATDHQPITEA 139 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N+ S+ L L+A + Sbjct: 140 SYVNIPVIAFCNTDSPLRFVDIAIPCNNKGPHSVGLMWWLLAREVLR 186 >gi|27805981|ref|NP_776804.1| 40S ribosomal protein SA [Bos taurus] gi|163303|gb|AAA62713.1| C10 protein [Bos taurus] Length = 295 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGNFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|149631993|ref|XP_001516915.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 295 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDVAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|154412101|ref|XP_001579084.1| ribosomal protein [Trichomonas vaginalis G3] gi|121913287|gb|EAY18098.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 256 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 49/221 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + I+ +L + V G N + M+ Y+F R TH+I+L+ T ++ A ++I V Sbjct: 10 EAVIKMMLAAKVYLGSTNLSF--GMKPYVFTCRKDGTHVINLAMTYEKIKLAARMI-YAV 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +L ++TKS + V + A+ V ++ G+ TN+ Sbjct: 67 EEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYS---------------- 110 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 I++ P LM V D N + A+ EA IP Sbjct: 111 ----------------------------IKNFCE-PRLMIVCDPNTDSQAVHEAAYANIP 141 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +A+ DT+++ D VD VIP N + S+ L L+ + Sbjct: 142 CIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLR 182 >gi|166895619|ref|YP_001661413.1| ribosomal protein S2 [Cycas taitungensis] gi|166706951|dbj|BAF98415.1| ribosomal protein S2 [Cycas taitungensis] Length = 216 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 30/225 (13%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 +++ L + G R + K+ YI+ N I+D +T+ + A I + Sbjct: 5 SSLVLQKSLSTNAHLGRRVAAHHSKV--YIYGFGNEIAILDPDKTLICSRNACHSIGSPI 62 Query: 64 ARGGRILFVATKSQASDCVMEAAKR-SAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLE 120 + GR L V T S + + + A + C+N +W +GG +T++ ++ +K+R Sbjct: 63 RKKGRSLPVNTNSLFDEIIEQMALSLIDRSCINDYQWRIGGFLTDYSSMHLFPKKIR--- 119 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 R +K G PD + +++ +RE I A RL Sbjct: 120 -----------------FSRPGNKKINFFGG-SGSNQRPDRVVIMNADRESSVILGADRL 161 Query: 181 RIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLVASAA 222 +IPIV++VD+N + Y IP ND S + + + + Sbjct: 162 QIPIVSLVDSNIPLGLCKGITYPIPAND-SIQFVYPSRNSITKTV 205 >gi|73986556|ref|XP_867610.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 4 [Canis familiaris] gi|73989788|ref|XP_860618.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 10 [Canis familiaris] Length = 267 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|123427072|ref|XP_001307173.1| ribosomal protein [Trichomonas vaginalis G3] gi|121888787|gb|EAX94243.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 256 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 49/221 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + I+ +L + V G N + M+ Y+F R TH+I+L+ T ++ A ++I V Sbjct: 10 EAVIKMMLAAKVYLGSTNLSF--GMKPYVFTCRKDGTHVINLAMTYEKIKLAARMI-YAV 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +L ++TKS + V + A+ V ++ G+ TN+ Sbjct: 67 EEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYS---------------- 110 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 I++ P LM V D N + A+ EA IP Sbjct: 111 ----------------------------IKNFCE-PRLMIVCDPNTDSQAVHEAAYANIP 141 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +A+ DT+++ D VD VIP N + S+ L L+ + Sbjct: 142 CIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLR 182 >gi|123457462|ref|XP_001316458.1| ribosomal protein [Trichomonas vaginalis G3] gi|123475378|ref|XP_001320867.1| ribosomal protein [Trichomonas vaginalis G3] gi|121899165|gb|EAY04235.1| ribosomal protein, putative [Trichomonas vaginalis G3] gi|121903681|gb|EAY08644.1| ribosomal protein, putative [Trichomonas vaginalis G3] Length = 256 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 49/221 (22%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTV 63 + I+ +L + V G N + M+ Y+F R TH+I+L+ T ++ A ++I V Sbjct: 10 EAVIKMMLAAKVYLGSTNLSF--GMKPYVFTCRKDGTHVINLAMTYEKIKLAARMI-YAV 66 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +L ++TKS + V + A+ V ++ G+ TN+ Sbjct: 67 EEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYS---------------- 110 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 I++ P LM V D N + A+ EA IP Sbjct: 111 ----------------------------IKNFCE-PRLMIVCDPNTDSQAVHEAAYANIP 141 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +A+ DT+++ D VD VIP N + S+ L L+ + Sbjct: 142 CIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLR 182 >gi|730679|sp|P38982|RSSA_CRIGR RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|289984|gb|AAB46394.1| 33 kDa protein [Cricetulus griseus] gi|298088|emb|CAA80434.1| 34/67 kDa laminin receptor [Cricetulus griseus] Length = 295 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|195622270|gb|ACG32965.1| 40S ribosomal protein SA [Zea mays] Length = 308 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 82/218 (37%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + + ERY+F R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQTERYVFKRRSDGIYIINLGKTWDKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L++ + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLSRMVLQ 189 >gi|226528260|ref|NP_001141088.1| hypothetical protein LOC100273170 [Zea mays] gi|194702582|gb|ACF85375.1| unknown [Zea mays] Length = 308 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 82/218 (37%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + + ERY+F R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQTERYVFKRRTDGIYIINLGKTWDKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI L++ + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLSRMVLQ 189 >gi|296233418|ref|XP_002762003.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Callithrix jacchus] gi|296233420|ref|XP_002762004.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Callithrix jacchus] gi|296233422|ref|XP_002762005.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Callithrix jacchus] gi|296233424|ref|XP_002762006.1| PREDICTED: 40S ribosomal protein SA-like isoform 4 [Callithrix jacchus] gi|296233426|ref|XP_002762007.1| PREDICTED: 40S ribosomal protein SA-like isoform 5 [Callithrix jacchus] Length = 295 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPPLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|289742825|gb|ADD20160.1| 40S ribosomal protein SA [Glossina morsitans morsitans] Length = 270 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRPDGIHIINLGKTWEKLMLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIEHAPDVYVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPMTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S SI L L+A + Sbjct: 140 INIPVIAFCNTDSALRYIDIAIPCNNKSPHSIGLMWWLLAREVLR 184 >gi|74025154|ref|XP_829143.1| 40S ribosomal protein SA [Trypanosoma brucei TREU927] gi|70834529|gb|EAN80031.1| 40S ribosomal protein SA, putative [Trypanosoma brucei] gi|261335096|emb|CBH18090.1| 40S ribosomal protein SA, putative [Trypanosoma brucei gambiense DAL972] gi|261335109|emb|CBH18103.1| 40S ribosomal protein SA, putative [Trypanosoma brucei gambiense DAL972] Length = 244 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 98/262 (37%), Gaps = 49/262 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + + + +++LL G +N M++YI + T+IID+ T L A +VI Sbjct: 11 LRMKESDVQKLLAMHCHLGTKNSS--SAMKKYIHGRTSDGTNIIDIHMTWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +T+ + + ++ + +++ G TN Q +K Sbjct: 69 A-AVENPQDVTVCSTRLFGQRAIFKFSQLVGTSFLGGRFIPGTFTN-----QIQKKFMQ- 121 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + A++EA Sbjct: 122 ---------------------------------------PRVLVVTDPRTDHQALREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A DT++ + VD IP N+ SI++ L+A + + + K Sbjct: 143 VNIPVIAFCDTDAPLEFVDIAIPCNNRGRHSISMMYWLLAREVLRLRGTIPRSVPWEVKV 202 Query: 240 AGETVVHSKEGMQLEEDSQSSE 261 +E ++ EE + ++E Sbjct: 203 DLFFYRDPEEALKQEEATAAAE 224 >gi|320584134|gb|EFW98345.1| 40S ribosomal protein S0 [Pichia angusta DL-1] Length = 265 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 89/224 (39%), Gaps = 49/224 (21%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 +L Q ++ L+ + G +N N YI+ R + +II++++T + A ++I+ Sbjct: 5 SLTQEDLQLLIAANAHLGSKNT--NVHNTSYIYKTRPDGVNIINVNKTWEKIVLAARIIA 62 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + ++ V+++ V++ A + + ++ G TN+ T + ++ Sbjct: 63 -AIPNPADVVAVSSRIYGQRAVLKFASHTGATAIAGRFTPGSFTNYIT-----RSFKE-- 114 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 P L+ V D + AI+E+ + Sbjct: 115 --------------------------------------PRLIIVTDPRTDAQAIKESSYV 136 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP++A+VD +S + +D IP N+ S L L+A + Sbjct: 137 NIPVIALVDCDSPAEYIDVAIPCNNKGKHSTGLIWWLLAREVLR 180 >gi|239610917|gb|EEQ87904.1| 40S ribosomal protein S2 [Ajellomyces dermatitidis ER-3] Length = 312 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 46/96 (47%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ LL S GH LWNP YIF R HII L T L++A +V+ + Sbjct: 154 DITLELLLASQTHLGHATSLWNPANAEYIFGIRQGVHIISLDVTAAYLRRAAKVVREVAR 213 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLG 100 GG ILFV T+ V+ AA+R+ V +W Sbjct: 214 HGGLILFVGTRKGQRRIVVSAAERAKGCHVFQRWDP 249 >gi|2910999|emb|CAA72242.1| YST protein [Candida albicans] Length = 253 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 53/271 (19%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + K Y++ R + +II++ +T + A ++I+ V Sbjct: 15 KLLLAANVHLGAKNVQVHNK--PYVYKTRPDGMNIINIGKTWEKIVLAARIIA-AVPNAS 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVVVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 D S + VD IP N+ I L L+A + R S + Sbjct: 147 TDMQSPSEYVDVAIPCNNKGKHCIGLIWWLLAREVL--RLRGIIPDRTTEWSVMPDLYFY 204 Query: 248 KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 ++ ++E+++ E + +G E A V E + Sbjct: 205 RDPEEIEQNA--VEEAKTEGVEGAPVAEAET 233 >gi|241953441|ref|XP_002419442.1| ribosomal protein SO-A homologue, putative; ribosomal protein of the small subunit, putative [Candida dubliniensis CD36] gi|269969628|sp|B9WEC5|RSSA_CANDC RecName: Full=40S ribosomal protein S0 gi|223642782|emb|CAX43036.1| ribosomal protein SO-A homologue, putative [Candida dubliniensis CD36] Length = 261 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + K Y++ R + +II++ +T + A ++I+ V Sbjct: 15 KLLLAANVHLGAKNVQVHNK--PYVYKTRPDGMNIINIGKTWEKIVLAARIIA-AVPNAS 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVIVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L+A + Sbjct: 147 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLIAREVLR 183 >gi|302898982|ref|XP_003047956.1| hypothetical protein NECHADRAFT_68978 [Nectria haematococca mpVI 77-13-4] gi|269969652|sp|C7Z0Q8|RSSA_NECH7 RecName: Full=40S ribosomal protein S0 gi|256728888|gb|EEU42243.1| hypothetical protein NECHADRAFT_68978 [Nectria haematococca mpVI 77-13-4] Length = 296 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I LL + G +N + ME Y++ R + +++++ +T + A ++I+ + Sbjct: 17 IEMLLAAQCHLGSKNLQVH--MENYLWKTRADGVNVLNVGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADVCVISARPYGQRAVLKFASHTGATAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +I ++A + Sbjct: 149 LTDTDSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLR 186 >gi|1039443|gb|AAB02772.1| putative ribosome-associated protein [Neurospora crassa] Length = 293 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 85/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I QLL + G +N + M+ Y++ R + +I+++ +T + A ++I+ + Sbjct: 17 IEQLLAAQCHIGSKNLGVH--MQPYLWKTRADGVNILNVGKTWEKIVLAARIIA-AIDNP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 ADICVISARPIGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + D +S + VD IP N+ +IA ++A + Sbjct: 149 LCDADSPTEYVDVAIPTNNKGRHAIACVWWMLAREVLR 186 >gi|291404418|ref|XP_002718548.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G N + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLGDTN--LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGVTPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQTAFREPRLLVVTDPRADHQPLPEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + + +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLSTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A VPE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPVPE 237 >gi|226495599|ref|NP_001149804.1| 40S ribosomal protein SA [Zea mays] gi|195634777|gb|ACG36857.1| 40S ribosomal protein SA [Zea mays] Length = 312 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L + V G +N + ++ERY++ R + +II+L +T LQ A +VI + Sbjct: 20 IQMMLAADVHLGTKN--CDFQVERYVYKRRTDGIYIINLGKTWDKLQLAARVIV-AIENP 76 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + + G TN Sbjct: 77 QDIIGQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN--------------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+E+ IP +A Sbjct: 116 -----------------QLQTSF-------SEPRLLILTDPRTDHQPIKESALGNIPTIA 151 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ +SI L+A + Sbjct: 152 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 189 >gi|74025178|ref|XP_829155.1| 40S ribosomal protein SA [Trypanosoma brucei TREU927] gi|70834541|gb|EAN80043.1| 40S ribosomal protein SA, putative [Trypanosoma brucei] Length = 277 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 98/262 (37%), Gaps = 49/262 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + + + +++LL G +N M++YI + T+IID+ T L A +VI Sbjct: 44 LRMKESDVQKLLAMHCHLGTKNSS--SAMKKYIHGRTSDGTNIIDIHMTWEKLILAARVI 101 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +T+ + + ++ + +++ G TN Q +K Sbjct: 102 A-AVENPQDVTVCSTRLFGQRAIFKFSQLVGTSFLGGRFIPGTFTN-----QIQKKFMQ- 154 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + A++EA Sbjct: 155 ---------------------------------------PRVLVVTDPRTDHQALREASL 175 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A DT++ + VD IP N+ SI++ L+A + + + K Sbjct: 176 VNIPVIAFCDTDAPLEFVDIAIPCNNRGRHSISMMYWLLAREVLRLRGTIPRSVPWEVKV 235 Query: 240 AGETVVHSKEGMQLEEDSQSSE 261 +E ++ EE + ++E Sbjct: 236 DLFFYRDPEEALKQEEATAAAE 257 >gi|92429560|gb|ABD93524.2| mitochondrial small ribosomal subunit protein [Solanum melongena] Length = 174 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 38/209 (18%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I++LL + Q G R + K+ Y RN IID +T+ L+ A I + V + Sbjct: 1 IQKLLSTNAQLGRRVAAHHFKI--YSVGSRNAMTIIDSDKTLICLRNACSFIGELVRQRA 58 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R +FV T + + + K S LGG +TN + + + + L + Sbjct: 59 RFIFVNTNFLFDEIIDQMTKTIGCRNDTSWRLGGFLTNSSSPRKFRGRNKKLNLTAVQ-- 116 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 PD + + DT+R+ IQEA +L+IPIV + Sbjct: 117 ------------------------------PPDCVVIFDTDRKSSVIQEASKLQIPIVGL 146 Query: 188 VDTNSNPD---LVDYVIPGNDDSSRSIAL 213 VD+N D + Y +P D S + + L Sbjct: 147 VDSNMPWDIYKKITYPVPAKD-SVQFVYL 174 >gi|19115325|ref|NP_594413.1| 40S ribosomal protein S0B [Schizosaccharomyces pombe 972h-] gi|15214286|sp|Q9P546|RSSA2_SCHPO RecName: Full=40S ribosomal protein S0-B gi|7981403|emb|CAB92099.1| 40S ribosomal protein S0B [Schizosaccharomyces pombe] Length = 287 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ LL + G +N +ME Y++ R + HII+L +T L A +VI+ T+ Sbjct: 18 IKNLLAADSHIGSKNLEV--RMENYVWKRRSDGIHIINLGKTWEKLVLAARVIA-TIENP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++++ V++ A + + ++ G TN+ T + R+ Sbjct: 75 ADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RTYRE-------- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 122 --------------------------------PRLIIVTDPRADAQAIKEASFVNIPVIA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT+S + VD IP N+ +SI L L+A + Sbjct: 150 LCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLR 187 >gi|41054972|ref|NP_957346.1| 40S ribosomal protein SA [Danio rerio] gi|82210121|sp|Q803F6|RSSA_DANRE RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|27882337|gb|AAH44504.1| Ribosomal protein SA [Danio rerio] gi|37362236|gb|AAQ91246.1| laminin receptor 1 [Danio rerio] gi|38541297|gb|AAH62859.1| Ribosomal protein SA [Danio rerio] gi|182888692|gb|AAI64084.1| Rpsa protein [Danio rerio] Length = 308 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 97/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYVYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGSTTFAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + IP +A+ +T+S VD IP N+ S+ L ++A + G + Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + E G+ A VP+ Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVGKEE--FQGEWTAPVPD 237 >gi|34234|emb|CAA43469.1| laminin-binding protein [Homo sapiens] Length = 285 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 95/271 (35%), Gaps = 55/271 (20%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + L +G G L + +ME+YI+ + + +II+L +T L A + I + Sbjct: 7 KFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLVAARAIV-AIENPAD 63 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + +++++ V++ A + + ++ G TN Sbjct: 64 VSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ---------------------- 101 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 I+ P L+ V D + + EA + +P +A+ Sbjct: 102 -----------------------IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALC 138 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETV 244 +T+S VD IP N+ + S+ L ++A + G + D + Sbjct: 139 NTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE 198 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 KE E + + E G+ A PE Sbjct: 199 EIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 227 >gi|195457346|ref|XP_002075534.1| GK14587 [Drosophila willistoni] gi|229891617|sp|B4NPT0|RSSA_DROWI RecName: Full=40S ribosomal protein SA; AltName: Full=Protein stubarista gi|194171619|gb|EDW86520.1| GK14587 [Drosophila willistoni] Length = 270 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +II+L +T L A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNIINLGKTWEKLVLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ AK + + ++ G TN Sbjct: 66 V-AIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I EA Sbjct: 112 --------------------------------IQPAFREPRLLVVTDPMTDHQPIMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S +D IP N+ S SI L L+A + Sbjct: 140 VNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLLAREVLR 184 >gi|250127|gb|AAB22299.1| 67 kda laminin receptor [Homo sapiens] Length = 295 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 100/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E + G+ A PE Sbjct: 200 DLYFYRDPEEIGKEEQAAAEKAVTKEEFL--GEWTAPAPE 237 >gi|303271761|ref|XP_003055242.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463216|gb|EEH60494.1| predicted protein [Micromonas pusilla CCMP1545] Length = 266 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 85/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++ + I+ +L +G G +N + +MERY++ R + +II+L +T L A +++ Sbjct: 4 LSQKEADIQMMLAAGCHLGTKN--CDFQMERYVWKRRSDGIYIINLGKTWDKLMLAARIL 61 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ + + V++ A+ + + + G TN Sbjct: 62 V-AIENPADVVCQSARPYGQRAVLKYAQYTGAKAIAGRHTPGTYTNQ------------- 107 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I++ P ++ + D ++ I E Sbjct: 108 --------------------------------IQEGFHEPRVLVLTDPRTDQQPISETAY 135 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +P +A DT+S LVD IP N+ + SI L+A + Sbjct: 136 VNLPTIAFCDTDSPLKLVDVAIPANNKAKHSIGCLYYLLARMVLQ 180 >gi|297670488|ref|XP_002813396.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] gi|297670490|ref|XP_002813397.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] gi|297670492|ref|XP_002813398.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Pongo abelii] gi|297670494|ref|XP_002813399.1| PREDICTED: 40S ribosomal protein SA-like isoform 4 [Pongo abelii] Length = 295 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 103/280 (36%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQHS-YMGA 235 + P +A+ +T+S VD IP N+ + S+ L ++A + I+R+HS + Sbjct: 140 VNPPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHSWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A P+ Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPQ 237 >gi|92429558|gb|ABD93523.2| mitochondrial small ribosomal subunit protein [Solanum lycopersicum] Length = 172 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 38/207 (18%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + K+ Y RN IID + + L+ A I + V + R Sbjct: 1 QKLLSTNAHLGRRVAEHHFKI--YSVGSRNGMTIIDSEKQLICLRNACSFIGELVRQRAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 +FV T + + + + + S LGG +TN + + + + L Sbjct: 59 FIFVNTNTLFDEIIDQMTQTIGCRNDTSWRLGGFLTNSSSPRKFRGRNKKL--------- 109 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 L I+ PD + + DT+R+ IQEA +L+IPIV +V Sbjct: 110 -------------------NLTAIQP----PDCVVIFDTDRKSSVIQEAAKLQIPIVGLV 146 Query: 189 DTNSNPD---LVDYVIPGNDDSSRSIA 212 D++ D + Y +P D S + + Sbjct: 147 DSSMPLDIYKKITYPVPAKD-SVQFVY 172 >gi|229462742|sp|O42817|RSSA_CANAL RecName: Full=40S ribosomal protein S0 gi|269969627|sp|C4YNR7|RSSA_CANAW RecName: Full=40S ribosomal protein S0 gi|7270973|emb|CAB77627.1| YST1 protein [Candida albicans] gi|238880938|gb|EEQ44576.1| 40S ribosomal protein S0-A [Candida albicans WO-1] Length = 261 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + K Y++ R + +II++ +T + A ++I+ V Sbjct: 15 KLLLAANVHLGAKNVQVHNK--PYVYKTRPDGMNIINIGKTWEKIVLAARIIA-AVPNAS 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVVVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L+A + Sbjct: 147 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183 >gi|208657595|gb|ACI30094.1| 40S ribosomal protein [Anopheles darlingi] Length = 288 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G + N +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDVTKMLAATTHIG--STSVNFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G I ++++ V++ A + + ++ G TN Sbjct: 66 ASI-EHPGEIYAISSRPYGQRAVLKYAHYTEATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQTAFREPRLLIVTDPLTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N S+ SI L L+A + Sbjct: 140 VNIPVIAFCNTDSPLKFVDIAIPCNTKSTHSIGLMWWLLAREVLR 184 >gi|109005784|ref|XP_001087649.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Macaca mulatta] gi|109005787|ref|XP_001087772.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Macaca mulatta] gi|297278863|ref|XP_002801626.1| PREDICTED: 40S ribosomal protein SA-like [Macaca mulatta] gi|297278866|ref|XP_002801627.1| PREDICTED: 40S ribosomal protein SA-like [Macaca mulatta] gi|297278868|ref|XP_002801628.1| PREDICTED: 40S ribosomal protein SA-like [Macaca mulatta] Length = 295 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + G TN Sbjct: 66 V-AIENPAVVSVISSRNTGQRAVLKFAAATGATPIAGHFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLIWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLDFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|312378068|gb|EFR24739.1| hypothetical protein AND_10459 [Anopheles darlingi] Length = 368 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G + N +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDVTKMLAATTHIG--STSVNFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G I ++++ V++ A + + ++ G TN Sbjct: 66 ASI-EHPGEIYAISSRPYGQRAVLKYAHYTEATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQTAFREPRLLIVTDPLTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N S+ SI L L+A + Sbjct: 140 VNIPVIAFCNTDSPLKFVDIAIPCNTKSTHSIGLMWWLLAREVLR 184 >gi|294663005|ref|YP_003579826.1| ribosomal protein S2 [Dictyostelium citrinum] gi|187479910|gb|ACD12711.1| ribosomal protein S2 [Dictyostelium citrinum] Length = 269 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 98/224 (43%), Gaps = 16/224 (7%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ + ++ G + WNP ++ +I+ E N H+I + + ++ +AL++I++ + G Sbjct: 18 MQYIYKTEFHIGEYAWRWNPMLKSFIYKETNRIHLIRIPAFLTVISQALKLITEVMRLRG 77 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++L VA + K+S Q + +++ G +T K + +R E+ Sbjct: 78 KVLIVANSLVNGRVIDTLLKKSRQPAIRTRYYAGGVTRRK------ENIRQYLEIQKGLT 131 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 K + L+ L G++ + P + ++D + + + E + L I + Sbjct: 132 NVKVKSKYLS----------QLVGVKGLIRKPAYILILDAVQGQYLLNECQVLGIQTIGC 181 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 DT N + Y + GN S + L+ A +G+ ++ S Sbjct: 182 GDTTLNLPKITYPLIGNFKSREKRSALLLLMYHAMFEGMRQETS 225 >gi|71020705|ref|XP_760583.1| hypothetical protein UM04436.1 [Ustilago maydis 521] gi|46100471|gb|EAK85704.1| hypothetical protein UM04436.1 [Ustilago maydis 521] Length = 329 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 43/241 (17%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQ-TVPMLQKALQVISDT 62 + T+ L+ S Q GH + YI+ +R+ I DL + T+P L++A V+ Sbjct: 114 HKLTLSHLVASTAQVGHSLSSLKAANQPYIYGQRHGVAIFDLERATLPALRRAASVVKAV 173 Query: 63 VARGGRILFVATKSQASDCVMEAAKR--SAQYCVN-SKWLGGMMTNWKTV--SQSIQKLR 117 R G ILFV T+ V+ A KR + V +W+ G++TN + S ++ L Sbjct: 174 AERDGVILFVGTRPGQQAAVLAATKRLAGNGFHVTAERWMPGVITNAPKLLASAILKSLH 233 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 D L+ T + + PDL+ V++ AI+EA Sbjct: 234 D----LDPTGTANTNRLASQTLQ------------------PDLVIVLNPIENSFAIREA 271 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 + IP +A+ D++ +P S+ L +++ A DG+ + + Sbjct: 272 TQANIPTIAITDSDVDP---------------SVELIIGVLSKAGEDGLKVRAKKLDEAD 316 Query: 238 K 238 K Sbjct: 317 K 317 >gi|328768235|gb|EGF78282.1| hypothetical protein BATDEDRAFT_90776 [Batrachochytrium dendrobatidis JAM81] Length = 278 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ LL + G +N KM Y+F R + +II++ +T L A ++I+ Sbjct: 15 MQMLLAAQSHLGTKNSEI--KMAPYVFKRRTDGVNIINIGKTWEKLVLAARIIASI-ENP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + ++ A+ + + ++ G TN+ T Sbjct: 72 ADVCVISARPYGQRAALKFAQYTGAQAIAGRFTPGTFTNYIT------------------ 113 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 R+ P L+ V D + I EA + IP+++ Sbjct: 114 ----------RSFRE-----------------PRLVVVTDPAMDHQPIIEASYVNIPVIS 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S+ VD IP N+ +I L L+A + Sbjct: 147 FCDTDSSLKFVDVAIPTNNKGRHAIGLGWYLLAREVLR 184 >gi|73963288|ref|XP_852946.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 1 [Canis familiaris] gi|73963290|ref|XP_866603.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 4 [Canis familiaris] gi|73963292|ref|XP_866616.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 5 [Canis familiaris] Length = 295 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 97/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ S+ L ++A + G Sbjct: 140 VNLPTIALCNTDSPLCYVDIAIPCNNKGVHSVGLMWWMLAREVLLMRGTISCEHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQATAEKAVTKEE--FQGEWTAPAPE 237 >gi|157877540|ref|XP_001687087.1| 40S ribosomal protein SA [Leishmania major strain Friedlin] gi|157877562|ref|XP_001687098.1| 40S ribosomal protein SA [Leishmania major strain Friedlin] gi|75030566|sp|Q4Q0Q0|RSSA_LEIMA RecName: Full=40S ribosomal protein SA gi|68130162|emb|CAJ09473.1| putative 40S ribosomal protein SA [Leishmania major strain Friedlin] gi|68130173|emb|CAJ09484.1| putative 40S ribosomal protein SA [Leishmania major strain Friedlin] Length = 246 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + ++LL G RN M++YI+ +HIID+ L A +VI Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQS--SAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +++ + + + ++ +++ G TN Sbjct: 69 A-AVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQ----------- 116 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 KK P ++ V D + AI+EA Sbjct: 117 ------------KKFVQ----------------------PRVLVVTDPRTDHQAIREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ + VD IP N+ +SI + L+A + Sbjct: 143 VNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLR 187 >gi|246880780|gb|ACS95092.1| ribosomal protein S2 [Dunaliella salina] Length = 878 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 12/123 (9%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIF-----------CERNNTHIIDLSQTVPMLQKA 55 +IR++L G+ FG + + +M++YI+ + H+I+L +T L KA Sbjct: 285 SIREMLAHGMHFGEKTVKCHARMKQYIWLHKQGQNKNRPFVKKGQHVINLLKTRRCLNKA 344 Query: 56 LQVISDTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQ 114 L ++ +G LF+ TK A+ V A+ + + VN++WLGGM+TNWKT+ +SI Sbjct: 345 LSTLTKYALKGRTFLFIGTKKPAAGLVARASFFTKNSFYVNTRWLGGMLTNWKTICKSIS 404 Query: 115 KLR 117 K+R Sbjct: 405 KIR 407 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL------PDLMFVVDTNREKL 172 ++ + +K TKK ++K +L++ GI +M L ++ ++ E Sbjct: 752 IDSIYDKNLSSSTKKLAAARKKKWQRLEKYFGGIANMTKLSQTKISKNVAIIIGQKEEMN 811 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 A++E +L + +VDTN +P L D++IP NDDS SI + + Sbjct: 812 AVRECNKLGLKTFTIVDTNCDPTLSDHIIPANDDSRNSIKYILTKFITRIRLAQKIR 868 >gi|328861353|gb|EGG10456.1| hypothetical protein MELLADRAFT_42122 [Melampsora larici-populina 98AG31] Length = 297 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 96/258 (37%), Gaps = 50/258 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + LL + G +N + M RY+ R + ++I+L+ T L A ++I + Sbjct: 17 VSLLLAAQCHIGSKN--CSKGMLRYVHKRRPDGVNVINLNSTWEKLIMAARIIV-AIENP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 74 HDVCVISARPYGHRAVLKFASSTGAQAIAGRFTPGNFTNYIT-----RSFKE-------- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + AI+EA + IP++A Sbjct: 121 --------------------------------PRLIVVTDPRLDAQAIREASYVNIPVIA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + DT++ + VD IP N+ S SI L + + + G + + Sbjct: 149 LCDTDAALNFVDVAIPTNNKSKHSIGLIWWFLCREVLR-LRGSFPRSGDGAWAVMPDMFF 207 Query: 247 SKEGMQLEEDSQSSESSV 264 ++ +LE ++Q + + Sbjct: 208 FRDPEELEAEAQEKANKL 225 >gi|322491106|emb|CBZ26371.1| putative 40S ribosomal protein SA [Leishmania mexicana MHOM/GT/2001/U1103] Length = 246 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + ++LL G RN M++YI+ +HIID+ L A +VI Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQS--SAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +++ + + + ++ +++ G TN Sbjct: 69 A-AVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQ----------- 116 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 KK P ++ V D + AI+EA Sbjct: 117 ------------KKFVQ----------------------PRVLVVTDPRTDHQAIREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ + VD IP N+ +SI + L+A + Sbjct: 143 VNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLR 187 >gi|322491095|emb|CBZ26360.1| putative 40S ribosomal protein SA [Leishmania mexicana MHOM/GT/2001/U1103] Length = 246 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + ++LL G RN M++YI+ +HIID+ L A +VI Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQS--SAMKKYIYGRTAEGSHIIDVHMMWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +++ + + + ++ +++ G TN Sbjct: 69 A-AVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQ----------- 116 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 KK P ++ V D + AI+EA Sbjct: 117 ------------KKFVQ----------------------PRVLVVTDPRTDHQAIREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ + VD IP N+ +SI + L+A + Sbjct: 143 VNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLLAREVLR 187 >gi|154346432|ref|XP_001569153.1| 40S ribosomal protein SA [Leishmania braziliensis MHOM/BR/75/M2904] gi|229891587|sp|A4HQ28|RSSA_LEIBR RecName: Full=40S ribosomal protein SA gi|134066495|emb|CAM44289.1| putative 40S ribosomal protein SA [Leishmania braziliensis MHOM/BR/75/M2904] Length = 246 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 84/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + ++LL G RN M++YI+ +HIID+ L A +VI Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQS--SAMKKYIYGRTAEGSHIIDVHMLWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +++ + + + ++ +++ G TN Q +K Sbjct: 69 A-AVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTN-----QIQKKFMQ- 121 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + AI+EA Sbjct: 122 ---------------------------------------PRVLVVTDPRTDHQAIREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ DT++ D VD IP N+ +SI + L+A + Sbjct: 143 VNIPVIALCDTDAPLDFVDIAIPCNNRGIKSIGMMYWLLAREVLR 187 >gi|302766523|ref|XP_002966682.1| hypothetical protein SELMODRAFT_36118 [Selaginella moellendorffii] gi|302792579|ref|XP_002978055.1| hypothetical protein SELMODRAFT_36138 [Selaginella moellendorffii] gi|300154076|gb|EFJ20712.1| hypothetical protein SELMODRAFT_36138 [Selaginella moellendorffii] gi|300166102|gb|EFJ32709.1| hypothetical protein SELMODRAFT_36118 [Selaginella moellendorffii] Length = 213 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 81/218 (37%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I+ +L S V G +N + +MERY++ R + II++ +T LQ A +VI Sbjct: 9 IQMMLASAVHLGTKN--CDFQMERYVWKRRSDGIFIINVGKTWEKLQLAARVIVGI-ENP 65 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ + + V++ A+ + + + G TN Sbjct: 66 HDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTN--------------------- 104 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 +L+ + P L+ + D + I+EA IP++A Sbjct: 105 -----------------QLQNSF-------SEPRLLILTDPRTDHQPIKEAALGNIPVIA 140 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT+S VD IP N+ SI ++A + Sbjct: 141 FCDTDSPMKYVDIAIPANNKGKHSIGCLFWMLARMVLQ 178 >gi|157810|gb|AAA28667.1| laminin receptor [Drosophila melanogaster] Length = 253 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 49/215 (22%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 +L + G N N +ME+Y++ R + +I++L +T LQ A + I + I Sbjct: 1 MLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIV-AIDNPSDI 57 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 ++++ V++ AK + + ++ G TN Sbjct: 58 FVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQ----------------------- 94 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 I+ P L+ V D N + I EA + IP++A + Sbjct: 95 ----------------------IQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTN 132 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 T+S +D IP N+ S+ SI L L+A + Sbjct: 133 TDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 167 >gi|122125804|sp|Q4KTE2|RSSA_SUBDO RecName: Full=40S ribosomal protein SA gi|61654700|gb|AAX48876.1| SA [Suberites domuncula] Length = 325 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 95/278 (34%), Gaps = 54/278 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +++ + + +LL +G G N + +M +Y+F + + II++ +T L A +VI Sbjct: 8 LSMKEDDVTKLLAAGTHLGDSNV--DIQMAQYVFKTKGDGVPIINVRKTWEKLLLAARVI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + +A K +++ A + + + ++ G TN Sbjct: 66 A-AIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I EA Sbjct: 112 --------------------------------IQKAFREPRLLIVSDARSDHQPITEAAY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A +TNS +D IP N+ S+ L L+ + + + Sbjct: 140 VNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISRELPWEVMP 199 Query: 240 A-----GETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 V +E + E + + + + A Sbjct: 200 DLFFYRDPEEVEKEEQAKAEAERERLATDQWQTNQPAA 237 >gi|194033232|ref|YP_002000569.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|60498744|dbj|BAC19874.2| Ribosomal protein S2 [Oryza sativa Japonica Group] Length = 483 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 94/250 (37%), Gaps = 44/250 (17%) Query: 1 MALPQFTIRQLLESGVQFG-HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M + +LL + G R + + YI R+ I+D +T+ L+ AL I Sbjct: 75 MTILSMVYTKLLCTNAHLGGRRVDAHHFNV--YICGSRSGIAILDSDKTLICLRTALHFI 132 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLR 117 + + R + T ++E +N S+W +G +N+ + +LR Sbjct: 133 GSLIRKKCRFFLLKTNHLFRCEILEKMVSC----INDSQWKIGTFFSNYLAKKKKF-RLR 187 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 TKK + ++ PD +++ +R+ I EA Sbjct: 188 -------------TKKINFGLNQQ-----------------PDCAVILNADRKSSVILEA 217 Query: 178 RRLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 R +IPIV +VD+ + Y IP ND S + + LFC LV I H M Sbjct: 218 ARSQIPIVFLVDSTIPGESHKRITYPIPAND-SIQFVYLFCHLVTKTGILECKSVHEPMQ 276 Query: 235 ADTKSAGETV 244 K+ V Sbjct: 277 TGLKAVDSLV 286 >gi|308801849|ref|XP_003078238.1| B1056G08.113 gene product (ISS) [Ostreococcus tauri] gi|116056689|emb|CAL52978.1| B1056G08.113 gene product (ISS) [Ostreococcus tauri] Length = 313 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 84/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + I +L +G G +N + +MERY++ R + HII+L +T L A +VI Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNV--DFQMERYVWKRRADGIHIINLGKTWDKLMLAARVI 88 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 V ++ A + V++ A+ + + + G TN K Sbjct: 89 V-AVENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQK------------ 135 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + + P ++ V D + I E Sbjct: 136 DAVFAE---------------------------------PRVLVVTDPRTDAQPISETAF 162 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP +A DT+S VD IP N+ + +SI L+A + Sbjct: 163 VNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQ 207 >gi|229891760|sp|Q01CH5|RSSA_OSTTA RecName: Full=40S ribosomal protein SA Length = 287 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 84/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + I +L +G G +N + +MERY++ R + HII+L +T L A +VI Sbjct: 5 MSQKEADIAMMLAAGCHLGTKNV--DFQMERYVWKRRADGIHIINLGKTWDKLMLAARVI 62 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 V ++ A + V++ A+ + + + G TN K Sbjct: 63 V-AVENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQK------------ 109 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + + + P ++ V D + I E Sbjct: 110 DAVFAE---------------------------------PRVLVVTDPRTDAQPISETAF 136 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP +A DT+S VD IP N+ + +SI L+A + Sbjct: 137 VNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQ 181 >gi|730682|sp|P38980|RSSA_TRIGR RecName: Full=40S ribosomal protein SA gi|476090|gb|AAA90977.1| 34/67 kD laminin binding protein [Tripneustes gratilla] Length = 316 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 86/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + +++ L SG G + + +M +Y++ + + T+II+L +T L A ++I Sbjct: 8 LALKEDDVQKFLASGAHIG--SSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P ++ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRILIVTDPRSDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ S SI L +++ + Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKSIHSIGLMWWMLSREVLR 184 >gi|332238580|ref|XP_003268479.1| PREDICTED: 40S ribosomal protein SA-like [Nomascus leucogenys] Length = 295 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 97/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFFAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + G TN Sbjct: 66 V-AIENPADVSIISSRNTGQRAVLKFAAATGATPIAGRVTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPGADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLCMRGTISREHPWEVLP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|229891762|sp|B0X6V0|RSSA_CULQU RecName: Full=40S ribosomal protein SA Length = 290 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 97/275 (35%), Gaps = 51/275 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + ++L + G + N +ME Y+F R + HII+L +T L A + I Sbjct: 8 LALKDDDVNKMLAATTHVG--STSVNFQMESYVFKRRPDGVHIINLGRTWEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G + ++++ V++ A + + ++ G TN Sbjct: 66 ASI-EYPGEVFAISSRQFGQRAVLKFAHYTEATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQPAFREPRLLIVTDPLTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT 237 + IP++A +T+S VD IP N S SI L L+A + G + D Sbjct: 140 VNIPVIAFCNTDSPLKFVDIAIPCNTKSPHSIGLMWWLLAREVLKLRGKISDKWELKPDL 199 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 + KE L E + +++ D AV Sbjct: 200 FFYRDPEEQEKEQAALLEAAPAAKEMYTDEPIPAV 234 >gi|92429562|gb|ABD93525.2| mitochondrial small ribosomal subunit protein [Petunia axillaris subsp. parodii] Length = 172 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 38/207 (18%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + Q G R + K+ Y RN IID +T+ L+ A I + V R Sbjct: 1 QKLLSTNAQLGRRVAAHHFKI--YSCGSRNAMTIIDSDKTLICLRNACSFIGELVRNKAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 +FV T + + + + K S LGG +TN + + + + L + Sbjct: 59 FIFVNTNTLFDEIIDQMTKTIGCRNDTSWRLGGFLTNSSSPRKFRGRNKKLNLTAVQ--- 115 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 PD + + DT R+ IQEA +L++PIV +V Sbjct: 116 -----------------------------PPDCVVIFDTERKSSVIQEAAKLQVPIVGLV 146 Query: 189 DTNSNPD---LVDYVIPGNDDSSRSIA 212 D++ + + Y +P ND S + + Sbjct: 147 DSSMPWEIYKKITYPVPAND-SVQFVY 172 >gi|157117892|ref|XP_001653087.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] gi|108875928|gb|EAT40153.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] Length = 362 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + ++L + G + N +ME Y++ R + HII+L +T L A + I Sbjct: 82 LALKDDDVTKMLAATTHVG--STSVNFQMESYVYKRRPDGVHIINLGRTWEKLLLAARCI 139 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G + ++++ V++ A + ++ G TN Sbjct: 140 ASI-EYPGEVFAISSRPYGQRAVLKFAHYTEATPTAGRFTPGAFTNQ------------- 185 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 186 --------------------------------IQPAFREPRLLIVTDPLTDHQPVTEASY 213 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N+ S SI L L+A + Sbjct: 214 VNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSIGLMWWLLAREVLR 258 >gi|157136928|ref|XP_001663866.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] gi|229891764|sp|Q16ZR8|RSSA_AEDAE RecName: Full=40S ribosomal protein SA gi|94468996|gb|ABF18347.1| 40S ribosomal protein SA [Aedes aegypti] gi|108869817|gb|EAT34042.1| 40S ribosomal protein sa (P40) (34/67 kda laminin receptor) (colon carcinoma laminin-binding protein) [Aedes aegypti] Length = 288 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + ++L + G + N +ME Y++ R + HII+L +T L A + I Sbjct: 8 LALKDDDVTKMLAATTHVG--STSVNFQMESYVYKRRPDGVHIINLGRTWEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G + ++++ V++ A + ++ G TN Sbjct: 66 ASI-EYPGEVFAISSRPYGQRAVLKFAHYTEATPTAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQPAFREPRLLIVTDPLTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N+ S SI L L+A + Sbjct: 140 VNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSIGLMWWLLAREVLR 184 >gi|297710776|ref|XP_002832040.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] gi|297710778|ref|XP_002832041.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] Length = 295 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQHS-YMGA 235 + P + + +T+S VD IP N+ + S+ L ++A + I+R+HS + Sbjct: 140 VNPPTIVLCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHSWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A P+ Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPQ 237 >gi|145344326|ref|XP_001416686.1| Ribosomal protein Sa, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gi|229891597|sp|A4RUK2|RSSA_OSTLU RecName: Full=40S ribosomal protein SA gi|144576912|gb|ABO94979.1| Ribosomal protein Sa, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] Length = 290 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + I +L +G G +N + +MERY++ R + HII+L +T L A ++I Sbjct: 5 MSQKEADIAMMLAAGCHLGTKNV--DFQMERYVWKRRADGIHIINLGRTWDKLMLAARII 62 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 ++ A + V++ A+ + + + G TN Sbjct: 63 V-ACENPQDVICQAARPYGQRAVLKFAQYTGAKAIAGRHTPGTYTN-------------- 107 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +K+ + E P ++ V D + I E Sbjct: 108 ------------QKDAIFAE-------------------PRVLIVTDPRTDAQPISETAY 136 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +P +A DT+S VD IP N+ + SI L+A + Sbjct: 137 VNLPTIAFCDTDSPLKNVDVAIPANNKAKHSIGCLYYLLARMVLQ 181 >gi|730678|sp|P38984|RSSA_CHLVR RecName: Full=40S ribosomal protein SA; AltName: Full=33 kDa laminin-binding protein; AltName: Full=p40 gi|7128|emb|CAA45333.1| unnamed protein product [Hydra viridissima] Length = 293 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 101/271 (37%), Gaps = 54/271 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + + L +GV G N + Y+F + + HII+L +T L A ++I Sbjct: 8 LSLKEEDVVKFLAAGVHLGSTNVG--SSCQGYVFKRKSDGIHIINLRKTWEKLILAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ + V++ A+ + + ++ G TN Q ++ R+ Sbjct: 66 ASI-ENPADVCVISSRPYGTRAVLKFAQSTGAIPIAGRFTPGTFTN-----QIQKRFRE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ D + A+ EA Sbjct: 119 ---------------------------------------PRLLISTDPQHDNQALTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT 237 + IP++A+ +T+S VD IP N+ +SI ++A + GI + + Sbjct: 140 VNIPVIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWILAREVLHLRGIISRKTPWNV-- 197 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ EE + + S+ D Sbjct: 198 -MPDLFFYRDPEDIEKEEQAAAIASAKPDEP 227 >gi|292559470|ref|YP_003540838.1| ribosomal protein S2 [Hartmannella vermiformis] gi|290775723|gb|ADD62222.1| ribosomal protein S2 [Hartmannella vermiformis] Length = 225 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 18/226 (7%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + + QL+ + V GH + YI R + +I S+ V +KA +S Sbjct: 1 MKIIKLKFSQLVYNSVHIGHPLSQSSNFSTWYIHGVRYSNLLISPSKMVFFWKKACLGLS 60 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 ++ G +LFV + + Q + +KW GG++TNWK V LR + Sbjct: 61 YLSSKFGSVLFVNLDPALNYLLHRMNNVIQQPMILNKWRGGLLTNWKFVF-----LRKIP 115 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 + +E + +R LP +F + N LA++EAR + Sbjct: 116 DFKKGIFINTWSQE-------------FMQNLRGATRLPSAVFTFNVNGNLLAVKEARTV 162 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 +PI ++ D+ S+ + Y +PGNDD+ SI V+ A + G Sbjct: 163 NLPIFSLSDSTSDTSNILYPLPGNDDAVSSITFCSVTVSKAILVGR 208 >gi|291402382|ref|XP_002717552.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 103/284 (36%), Gaps = 63/284 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKTKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G +TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTLTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFWEPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+S VD IP N+ + S+ L ++A + H + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVL------HMRGTISCEH 193 Query: 240 AGET-----VVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E E ++ EE + + ++ + G+ A PE Sbjct: 194 PWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPE 237 >gi|114688255|ref|XP_001140204.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Pan troglodytes] gi|114688257|ref|XP_521025.2| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 9 [Pan troglodytes] gi|114688259|ref|XP_001140379.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 4 [Pan troglodytes] gi|114688261|ref|XP_001140458.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 5 [Pan troglodytes] gi|114688263|ref|XP_001140535.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 6 [Pan troglodytes] gi|114688265|ref|XP_001140623.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 7 [Pan troglodytes] gi|114688267|ref|XP_001140709.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 8 [Pan troglodytes] gi|332860612|ref|XP_003317485.1| PREDICTED: 40S ribosomal protein SA-like [Pan troglodytes] Length = 295 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 96/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T A + + Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKFLLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++ + V++ A + V + G TN Sbjct: 66 V-AIENPADVTVISSGNTGQRAVLKFAAATGATPVAGHFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAQEVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|74659472|sp|Q6BW39|RSSA_DEBHA RecName: Full=40S ribosomal protein S0 Length = 261 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 101/265 (38%), Gaps = 57/265 (21%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + K Y++ R + ++I++ +T + A ++I+ + Sbjct: 15 KLLLAANVHLGSKNVQVHNK--PYVYKTRPDGVNVINVGKTWEKIVLAARIIA-AIPNAA 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + +T++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSTRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVVVTDPRTDFQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT------KS 239 D +S + VD IP N+ SI L LVA + GI + + + Sbjct: 147 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLVAREVLRLRGIIPDRTTEWSVMPDLYFYRD 206 Query: 240 AGETVVHSKEGMQLEEDSQSSESSV 264 E ++ E ++ ++ ++ + Sbjct: 207 PEEIEQNATEDIKTDDVEEAPAADA 231 >gi|50309339|ref|XP_454677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74660381|sp|Q6CN12|RSSA_KLULA RecName: Full=40S ribosomal protein S0 gi|49643812|emb|CAG99764.1| KLLA0E16171p [Kluyveromyces lactis] Length = 254 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 100/271 (36%), Gaps = 49/271 (18%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + E Y++ R + ++I++ +T + A ++I+ + Sbjct: 15 QLLLAARVHLGAKNVQVHQ--EPYVYKARPDGVNVINVGKTWEKIVLAARIIA-AIPNPE 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++ +++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVVAISSRTYGQRAVLKYAAHTGATPIAGRFTPGSFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVIVTDPRSDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHS 247 D +S + VD IP N+ SI L L+A + + Sbjct: 147 TDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALPDRTQPWAIMPDLYFYRN 206 Query: 248 KEGMQLEEDSQSSESSVLDGQEVAVVPELMS 278 E ++ + + + +S +E E + Sbjct: 207 PEEIEQQTAEEEAVASGEQTEEAVDATEEQT 237 >gi|6323077|ref|NP_013149.1| Rps0bp [Saccharomyces cerevisiae S288c] gi|1171635|sp|P46654|RSSA2_YEAST RecName: Full=40S ribosomal protein S0-B; AltName: Full=Nucleic acid-binding protein NAB1B gi|229891576|sp|B3LT19|RSSA2_YEAS1 RecName: Full=40S ribosomal protein S0-B; AltName: Full=Nucleic acid-binding protein NAB1B gi|229891577|sp|A7A0V3|RSSA2_YEAS7 RecName: Full=40S ribosomal protein S0-B; AltName: Full=Nucleic acid-binding protein NAB1B gi|1002792|gb|AAC49276.1| Yst2p [Saccharomyces cerevisiae] gi|1181269|emb|CAA64295.1| nucleic acid binding protein [Saccharomyces cerevisiae] gi|1370302|emb|CAA97578.1| NAB1B [Saccharomyces cerevisiae] gi|151941216|gb|EDN59594.1| ribosomal protein S0B [Saccharomyces cerevisiae YJM789] gi|190406087|gb|EDV09354.1| ribosomal protein S0B [Saccharomyces cerevisiae RM11-1a] gi|259148037|emb|CAY81286.1| Rps0bp [Saccharomyces cerevisiae EC1118] gi|285813470|tpg|DAA09366.1| TPA: Rps0bp [Saccharomyces cerevisiae S288c] Length = 252 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + G RN + E Y+F R + H+I++ +T L Sbjct: 1 MSLPATFDLTPEDAQLLLAANTHLGARNVQVHQ--EPYVFNARPDGVHVINVGKTWEKLV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + ++ +++++ V++ A + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLVIVTDPRLDAQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+EA + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLR 183 >gi|254566987|ref|XP_002490604.1| Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp [Pichia pastoris GS115] gi|269969659|sp|C4QYK0|RSSA_PICPG RecName: Full=40S ribosomal protein S0 gi|238030400|emb|CAY68323.1| Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp [Pichia pastoris GS115] gi|328350992|emb|CCA37392.1| 40S ribosomal protein S0 [Pichia pastoris CBS 7435] Length = 263 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + E Y++ R + ++I++ +T + A ++I+ + Sbjct: 15 KLLLAANVHLGAKNCQVH--NEPYVYKTRPDGVNVINIGKTWEKIVLAARIIA-AIPNPE 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++ V++++ V++ A + + ++ G TN+ T R+ +E Sbjct: 72 DVVAVSSRTFGQRAVLKFASHTNGSAIAGRFTPGSFTNYIT--------REFKE------ 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IPI+A+ Sbjct: 118 -------------------------------PRLIIVTDPRTDSQAIKESSYVNIPIIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L++ + Sbjct: 147 TDMDSPSEFVDVAIPCNNKGKHSIGLIWYLLSREVLR 183 >gi|74664714|sp|Q96VK7|RSSA_CANTR RecName: Full=40S ribosomal protein S0 gi|15020801|emb|CAC44623.1| ribosomal protein [Candida tropicalis] Length = 261 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL V G +N + K Y++ R + +II++ +T + A ++I+ + Sbjct: 15 KLLLAGNVHLGSKNVQVHNK--PYVYKTRPDGVNIINIGKTWEKIVLAARIIA-AIPNAN 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ A + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVIVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L+A + Sbjct: 147 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183 >gi|226348827|gb|ACO50731.1| ribosomal protein S2 [Micromonas pusilla CCMP1545] Length = 221 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 7/189 (3%) Query: 31 RYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSA 90 Y+ R+ + +++ +KAL + A+GGRIL V T S V A + Sbjct: 23 PYLCGYRDKVPFFNPEESLVATKKALVFMQRVHAKGGRILLVNTGPGLSQMVKITAAATG 82 Query: 91 QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALD 150 VN W+GG+MTNW + S + + + K K+ + Sbjct: 83 WAYVNEHWIGGLMTNWHQLKYSSHAFHKFHKWITPLMA------HTVSFPRFTKAKKRFE 136 Query: 151 GIRDMGGLPDLMFVVD-TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSR 209 G++ + LPD++ V+ T K + E +P+V VDT S + IP N + Sbjct: 137 GLKPLVRLPDVVVVLQATQTYKHILHEGLSFGVPMVTCVDTYSPMTESHFPIPVNIHNPT 196 Query: 210 SIALFCDLV 218 C Sbjct: 197 FAYFLCKAF 205 >gi|50294117|ref|XP_449470.1| hypothetical protein [Candida glabrata CBS 138] gi|74661046|sp|Q6FJX4|RSSA_CANGA RecName: Full=40S ribosomal protein S0 gi|49528784|emb|CAG62446.1| unnamed protein product [Candida glabrata] Length = 251 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + G RN + E Y+F R + H+I++ +T L Sbjct: 1 MSLPATFDLTPEDAQLLLAANTHLGARNVQVHQ--EPYVFNARPDGVHVINVGKTWEKLV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + ++ +++++ V++ A + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLVIVTDPRSDAQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+EA + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLR 183 >gi|156403814|ref|XP_001640103.1| predicted protein [Nematostella vectensis] gi|229891594|sp|A7RKS5|RSSA_NEMVE RecName: Full=40S ribosomal protein SA gi|156227235|gb|EDO48040.1| predicted protein [Nematostella vectensis] Length = 310 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + L + + + L +GV G + +ME Y++ + + +II++ +T L A ++I Sbjct: 8 LQLKEEDVVKFLAAGVHLG--ANNCDFQMEDYVYKRKSDGVNIINVKKTWEKLLLAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 T+ + ++ + +++ A + + ++ G TN Sbjct: 66 V-TIENPADVCVISARPYGQRAILKYASHTGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVCDPRIDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N+ SI L L+A + Sbjct: 140 VNIPVIAFCNTDSPLRHVDVAIPCNNKGIHSIGLMFWLLAREVLR 184 >gi|268574158|ref|XP_002642056.1| C. briggsae CBR-RPS-0 protein [Caenorhabditis briggsae] gi|229891582|sp|A8XSS1|RSSA_CAEBR RecName: Full=40S ribosomal protein SA gi|187025058|emb|CAP35523.1| CBR-RPS-0 protein [Caenorhabditis briggsae AF16] Length = 278 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 107/278 (38%), Gaps = 51/278 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 AL + + +LL + G N N +M++Y++ R + +II++ +T L Sbjct: 9 ALTEEDVMKLLATQAHLGSTN--LNFQMQQYVYKRRFDGPNIINVKKTWEKLLL-AARAI 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V ++ V+ + A +++ A + + ++ G +TN Q + ++ Sbjct: 66 AAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTN-----QIQKTFKE-- 118 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 P L+ + D + A+ EA + Sbjct: 119 --------------------------------------PRLLVISDPRIDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA--AIDGIARQHSYMGADTK 238 +P+++ V+T S L+D +P N+ RSI L ++A + G + + D K Sbjct: 141 GVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLDGK 200 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 + ++ + E++ + + V + QE P++ Sbjct: 201 EIMPDLYFYRDPTETEKEETGAHAEVAETQEFQQQPDI 238 >gi|284162049|ref|YP_003400672.1| ribosomal protein S2 [Archaeoglobus profundus DSM 5631] gi|284012046|gb|ADB57999.1| ribosomal protein S2 [Archaeoglobus profundus DSM 5631] Length = 203 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 50/216 (23%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + L +GV G + + M+++I+ R + +++D+ + ++ A + ++ + Sbjct: 19 EYLAAGVHIGTQIRTGD--MKKFIYKVRPDGLYVLDIKKLDERIRIAGKFLAR--FEPSK 74 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 IL V+ + VM A+ V +++ G +TN L++ E Sbjct: 75 ILAVSARQYGQKPVMMFARAVGCDYVIGRFIPGTLTNPM--------LKEYRE------- 119 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 PD++ V D +K A++EA R+ IP+VA+ Sbjct: 120 ------------------------------PDVVIVTDPAIDKQAVEEATRVGIPVVALC 149 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DTN++ VD VIP N+ +++AL L+A + Sbjct: 150 DTNNSTANVDLVIPTNNKGRKALALVYWLLAREVLR 185 >gi|14583014|gb|AAK69721.1|AF284768_1 laminin receptor-like protein LAMRL5 [Homo sapiens] Length = 295 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 53/279 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLTARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVSDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+S VD IP N+ + S+ L ++A + + S Sbjct: 140 VNLPTIALCNTDSPLHYVDIAIPCNNKGTHSVGLMWWMLAREVLR-MRGTISREHPWEVM 198 Query: 240 AGETVVHSKEGMQLEEDSQSSES---SVLDGQEVAVVPE 275 E ++ EE + + ++ L G+ A PE Sbjct: 199 PDLYFYRDPEEIEKEEQAAAEKAMTREELQGEWTAPAPE 237 >gi|229891758|sp|Q4QY71|RSSA_SPAAU RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 Length = 304 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 109/297 (36%), Gaps = 70/297 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +M++Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMDQYVYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L ++A + I+R+H Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKEGMQLEEDSQSSE---SSVLDGQEVAVVPEL 276 + + ++A E V KE Q E + ++E V D E VP + Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAV-GKEEFQGEWSAPAAEFTQPEVADWSEGVAVPSV 255 >gi|326366194|gb|ADZ54790.1| 40S ribosomal protein S0 [Candida orthopsilosis] Length = 205 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N + K Y++ R + +II++ +T + A ++I+ + Sbjct: 15 KLLLAANVHLGAKNVQVHNK--PYVYKTRPDGVNIINIGKTWEKIVLAARIIA-AIPNAS 71 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + ++++ V++ + + ++ G TN+ T + ++ Sbjct: 72 DVAVCSSRTFGQRAVLKFGAHTGATAIAGRFTPGNFTNYIT-----RSFKE--------- 117 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 118 -------------------------------PRLVVVTDPRTDAQAIKESSYVNIPVIAL 146 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L+A + Sbjct: 147 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183 >gi|221123853|ref|XP_002156320.1| PREDICTED: similar to ribosomal protein SA [Hydra magnipapillata] Length = 293 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 50/269 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L Q + + L +GV G N + Y+F + + HII+L +T L A ++I Sbjct: 8 LSLKQEDVVKFLAAGVHLGSTNVA--SSCQGYVFKRKSDGIHIINLRKTWEKLILAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G + ++++ + V++ A+ + V ++ G TN Sbjct: 66 ASI-EHPGDVCVISSRPYGTRAVLKFAQNTGAIAVAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ D + A+ EA Sbjct: 112 --------------------------------IQKAFREPRLLISTDPQHDNQALTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IPI+A+ +T+S VD IP N+ +SI ++A + + S Sbjct: 140 VNIPIIALCNTDSPLRFVDCAIPCNNRGIQSIGTMWWMLAREVLR-LRGVISRKAEWDTM 198 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 E ++ EE + + S+ D Sbjct: 199 PDLFFYRDPEDIEKEEQAAAIASAKPDEP 227 >gi|114151618|ref|YP_740437.1| ribosomal protein S2 [Zea luxurians] gi|110287614|gb|ABG65660.1| ribosomal protein S2 [Zea luxurians] Length = 530 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + K+ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHHFKV--YIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G +TN Sbjct: 59 YLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFLTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 N ++ R + K+ G + PD + ++ +R+ I EA Sbjct: 104 -----------------ANPKKFRSRNKKIYFG---LNRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|114151586|ref|YP_740354.1| ribosomal protein S2 [Zea perennis] gi|102567920|gb|ABF70837.1| ribosomal protein S2 [Zea perennis] Length = 533 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + K+ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHHFKV--YIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G +TN Sbjct: 59 YLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFLTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 N ++ R + K+ G + PD + ++ +R+ I EA Sbjct: 104 -----------------ANPKKFRSRNKKIYFG---LNRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|324518737|gb|ADY47191.1| 40S ribosomal protein SA [Ascaris suum] Length = 299 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 95/277 (34%), Gaps = 51/277 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 L + + +LL G + +ME+Y++ R + THII L +T L Sbjct: 9 TLKEEDVMKLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKLLL-AARAV 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + V+ + A +++ A + + ++ G +TN Sbjct: 66 AAIENPADVCVVSARPYAQRALLKFAAHTGATPIFGRFTPGCLTNQ-------------- 111 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I+ P L+ V D + A+ EA + Sbjct: 112 -------------------------------IQKSFKEPRLLIVSDPRVDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTK 238 +P+++ +T+S VD IP N+ +SI L ++A I G + + D K Sbjct: 141 GVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWMLAREVLLIKGKMTRQTGFVLDDK 200 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + ++ + E++ + + A E Sbjct: 201 EIMPDLYFYRDPDEQEKEEAVEAREIKEPWGAAAAAE 237 >gi|324518528|gb|ADY47131.1| 40S ribosomal protein SA [Ascaris suum] Length = 299 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 95/277 (34%), Gaps = 51/277 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 L + + +LL G + +ME+Y++ R + THII L +T L Sbjct: 9 TLKEEDVMKLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKLLL-AARAV 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + V+ + A +++ A + + ++ G +TN Sbjct: 66 AAIENPADVCVVSARPYAQRALLKFAAHTGATPIFGRFTPGCLTNQ-------------- 111 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I+ P L+ V D + A+ EA + Sbjct: 112 -------------------------------IQKSFKEPRLLIVSDPRVDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTK 238 +P+++ +T+S VD IP N+ +SI L ++A I G + + D K Sbjct: 141 GVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWMLAREVLLIKGKMTRQTGFVLDDK 200 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + ++ + E++ + + A E Sbjct: 201 EIMPDLYFYRDPDEQEKEEAVEAREIKEPWGAAAAAE 237 >gi|324519596|gb|ADY47425.1| 40S ribosomal protein SA [Ascaris suum] Length = 312 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 95/277 (34%), Gaps = 51/277 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 L + + +LL G + +ME+Y++ R + THII L +T L Sbjct: 9 TLKEEDVMKLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKLLL-AARAV 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + V+ + A +++ A + + ++ G +TN Sbjct: 66 AAIENPADVCVVSARPYAQRALLKFAAHTGATPIFGRFTPGCLTNQ-------------- 111 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I+ P L+ V D + A+ EA + Sbjct: 112 -------------------------------IQKSFKEPRLLIVSDPRVDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTK 238 +P+++ +T+S VD IP N+ +SI L ++A I G + + D K Sbjct: 141 GVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWMLAREVLLIKGKMTRQTGFVLDDK 200 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + ++ + E++ + + A E Sbjct: 201 EIMPDLYFYRDPDEQEKEEAVEAREIKEPWGAAAAAE 237 >gi|114688269|ref|XP_001140113.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 2 [Pan troglodytes] Length = 267 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 96/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T A + + Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKFLLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++ + V++ A + V + G TN Sbjct: 66 V-AIENPADVTVISSGNTGQRAVLKFAAATGATPVAGHFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAQEVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|92429556|gb|ABD93522.2| mitochondrial small ribosomal subunit protein [Physalis sp. TA1367] Length = 171 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 38/206 (18%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 ++LL + G R + K+ Y RN IID T+ L+ A I + V R Sbjct: 1 QKLLSTNAHLGRRVAAHHFKI--YSAGSRNAMTIIDSDNTLICLRNACSFIGELVRHKAR 58 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 +FV T + + + + K S LGG +TN + + + + L + Sbjct: 59 FIFVNTNTLFDEIIDQMTKTIGCKNDTSWRLGGFLTNSSSPRKFRGRNKKLNLTAVQ--- 115 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 PD + + D+ R+ IQEA +L+IPIV +V Sbjct: 116 -----------------------------PPDCVVIFDSERKSSVIQEASKLQIPIVGLV 146 Query: 189 DTNSNPD---LVDYVIPGNDDSSRSI 211 D+++ D + Y +P ND S + + Sbjct: 147 DSSTPWDIYKKITYPVPAND-SVQFV 171 >gi|307179455|gb|EFN67779.1| 40S ribosomal protein SA [Camponotus floridanus] Length = 312 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 83/227 (36%), Gaps = 51/227 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER---NNTHIIDLSQTVPMLQKALQ 57 +AL + + ++L +G G N N +ME+Y++ +R ++I+L T L A + Sbjct: 8 LALKEDDVTKMLAAGTHLGAENV--NFQMEQYVYKKRVDGAGVNVINLRHTWEKLLLAAR 65 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 I + + ++ + V++ A + + ++ G TN Sbjct: 66 AIV-AIEHPSEVFVISCRHSGQRAVLKFAAHTGATPIAGRFTPGAFTNQ----------- 113 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 I+ P L+ V D + + I EA Sbjct: 114 ----------------------------------IQAAFREPRLLIVTDPSTDHQPITEA 139 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N S ++ L L+A + Sbjct: 140 SYVNIPVIAFCNTDSPLRFVDIAIPCNTKSLHTVGLMWWLLAREVLR 186 >gi|114633295|ref|XP_001139402.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 3 [Pan troglodytes] gi|114633297|ref|XP_001139486.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 4 [Pan troglodytes] Length = 252 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEHVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTIYREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKVVTKEE--FQGEWTAPAPE 237 >gi|242013672|ref|XP_002427526.1| 40S ribosomal protein SA, putative [Pediculus humanus corporis] gi|212511928|gb|EEB14788.1| 40S ribosomal protein SA, putative [Pediculus humanus corporis] Length = 288 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 103/266 (38%), Gaps = 58/266 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G+ N + +ME+Y++ + + +II+L +T L A + I Sbjct: 8 LSLREDDVTKMLVACTHLGNDNV--DFQMEQYVYKRKADGIYIINLRKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIEHPSEVFVISSRLYGQRAVLKFAANTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPQTDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A +T+S VD IP N+ + SI L L+A + R + +TK Sbjct: 140 VNIPVIAFCNTDSPLRFVDIAIPCNNKAPHSIGLMWWLLAREVL----RLRGSIPRETK- 194 Query: 240 AGETVVHS---KEGMQLEEDSQSSES 262 + VV ++ + E+D Q+++ Sbjct: 195 -WDVVVDLFFYRDPEEAEKDDQATKE 219 >gi|324518583|gb|ADY47146.1| 40S ribosomal protein SA [Ascaris suum] Length = 312 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 95/277 (34%), Gaps = 51/277 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 L + + +LL G + +ME+Y++ R + THII L +T L Sbjct: 22 TLKEEDVMKLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKLLL-AARAV 78 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + V+ + A +++ A + + ++ G +TN Sbjct: 79 AAIENPADVCVVSARPYAQRALLKFAAHTGATPIFGRFTPGCLTNQ-------------- 124 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I+ P L+ V D + A+ EA + Sbjct: 125 -------------------------------IQKSFKEPRLLIVSDPRVDHQAVTEASYV 153 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTK 238 +P+++ +T+S VD IP N+ +SI L ++A I G + + D K Sbjct: 154 GVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWMLAREVLLIKGKMTRQTGFVLDDK 213 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + ++ + E++ + + A E Sbjct: 214 EIMPDLYFYRDPDEQEKEEAVEAREIKEPWGAAAAAE 250 >gi|4809047|gb|AAD30064.1|AF133210_1 laminin receptor precursor-like protein/ p40 ribosome associated-like protein [Trypanosoma cruzi] Length = 298 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 100/263 (38%), Gaps = 50/263 (19%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG 66 +++L+ FG +N M++YI + T+IIDL T L A +VI+ V Sbjct: 35 VQKLVAMHCHFGTKNRS--NAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIA-AVENP 91 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + +T+ + + ++ + +++ G TN Q +K Sbjct: 92 QDVTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTN-----QIQKKFMQ-------- 138 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ V D ++ A +EA + IP++A Sbjct: 139 --------------------------------PRVLLVTDPRTDQQAFREASLVNIPVIA 166 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 DT++ + VD IP ND SI++ L+A + + D K Sbjct: 167 FCDTDAPLEFVDIAIPCNDRRRYSISMMYWLLAREVLRLRGTIPRSVPWDVKVDLFFYRD 226 Query: 247 SKEGMQLEEDSQSSESSVLDGQE 269 +E ++ EE +Q++ + V + E Sbjct: 227 PEEALKHEEVNQAA-APVAEVDE 248 >gi|6321653|ref|NP_011730.1| Rps0ap [Saccharomyces cerevisiae S288c] gi|417336|sp|P32905|RSSA1_YEAST RecName: Full=40S ribosomal protein S0-A; AltName: Full=Nucleic acid-binding protein NAB1A gi|229891573|sp|B3LI22|RSSA1_YEAS1 RecName: Full=40S ribosomal protein S0-A; AltName: Full=Nucleic acid-binding protein NAB1A gi|229891574|sp|A6ZUM5|RSSA1_YEAS7 RecName: Full=40S ribosomal protein S0-A; AltName: Full=Nucleic acid-binding protein NAB1A gi|313103664|pdb|3IZB|A Chain A, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome gi|315113448|pdb|3O2Z|A Chain A, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. gi|315113476|pdb|3O30|A Chain A, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. gi|172026|gb|AAB05643.1| nucleic acid-binding protein [Saccharomyces cerevisiae] gi|1323385|emb|CAA97241.1| NAB1A [Saccharomyces cerevisiae] gi|151943491|gb|EDN61802.1| ribosomal protein S0A [Saccharomyces cerevisiae YJM789] gi|190406776|gb|EDV10043.1| ribosomal protein S0A [Saccharomyces cerevisiae RM11-1a] gi|259146715|emb|CAY79972.1| Rps0ap [Saccharomyces cerevisiae EC1118] gi|285812408|tpg|DAA08308.1| TPA: Rps0ap [Saccharomyces cerevisiae S288c] Length = 252 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 90/231 (38%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + G RN + E Y+F R + H+I++ +T L Sbjct: 1 MSLPATFDLTPEDAQLLLAANTHLGARNVQVHQ--EPYVFNARPDGVHVINVGKTWEKLV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + ++ +++++ V++ A + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLVIVTDPRSDAQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+EA + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLR 183 >gi|315929212|gb|EFV08433.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 305] Length = 112 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 8/114 (7%) Query: 155 MGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 M PD++FV+DT +EK+A+QEA RLRIP+VA +DTN +PDLV Y IPGNDD+ RS+ LF Sbjct: 1 MKTQPDMIFVIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLF 60 Query: 215 CDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 C +A A +G A + + GE + + ++ + EE + + ++ + Sbjct: 61 CQEMAEAINEGKALR--------EQDGEALANEEKEITDEEKKEVLDEAMSEED 106 >gi|114688271|ref|XP_001140031.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 1 [Pan troglodytes] Length = 252 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 96/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T A + + Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKFLLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++ + V++ A + V + G TN Sbjct: 66 V-AIENPADVTVISSGNTGQRAVLKFAAATGATPVAGHFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAQEVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|281500808|pdb|3JYV|B Chain B, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 193 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + G RN + E Y+F R + H+I++ +T L A ++I+ + Sbjct: 7 QLLLAANTHLGARNVQVHQ--EPYVFNARPDGVHVINVGKTWEKLVLAARIIA-AIPNPE 63 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++ +++++ V++ A + + ++ G TN+ T + ++ Sbjct: 64 DVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT-----RSFKE--------- 109 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+EA + IP++A+ Sbjct: 110 -------------------------------PRLVIVTDPRSDAQAIKEASYVNIPVIAL 138 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L+A + Sbjct: 139 TDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLR 175 >gi|49258822|pdb|1S1H|B Chain B, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is In File 1s1i Length = 185 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 49/217 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + G RN + E Y+F R + H+I++ +T L A ++I+ + Sbjct: 2 QLLLAANTHLGARNVQVHQ--EPYVFNARPDGVHVINVGKTWEKLVLAARIIA-AIPNPE 58 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ++ +++++ V++ A + + ++ G TN+ T + ++ Sbjct: 59 DVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYIT-----RSFKE--------- 104 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+EA + IP++A+ Sbjct: 105 -------------------------------PRLVIVTDPRSDAQAIKEASYVNIPVIAL 133 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ SI L L+A + Sbjct: 134 TDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLR 170 >gi|48476439|gb|AAT44424.1| 40S ribosomal protein Sa-like protein [Sparus aurata] Length = 294 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 109/297 (36%), Gaps = 70/297 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +M++Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMDQYVYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L ++A + I+R+H Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKEGMQLEEDSQSSE---SSVLDGQEVAVVPEL 276 + + ++A E V KE Q E + ++E V D E VP + Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAV-GKEEFQGEWSAPAAEFTQPEVADWSEGVAVPSV 255 >gi|164422215|gb|ABY55188.1| ribosomal protein S2 [Bambusa oldhamii] Length = 421 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 84/228 (36%), Gaps = 43/228 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + ++LL + G R + K+ YI RN I+D +T+ L+ AL I Sbjct: 1 MTILSIVCKKLLCTNAHLGRRVAAHHFKV--YICGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + GR F+ T +ME +N S+W +G TN Sbjct: 59 SPIRQKGRSFFLKTNHLFRYEIMEEMASC----INDSQWKIGAFFTNS------------ 102 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 + K K + PD + +++ +R+ I EA Sbjct: 103 ---------------FANKKKFHSRKKKINFG----LNQQPDCVVILNADRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 R +IPI ++VD+ + Y IP ND + + LF + I Sbjct: 144 RSQIPIASLVDSTIPWESHKRITYPIPANDP-IQFVYLFRHSITKTVI 190 >gi|324518296|gb|ADY47063.1| 40S ribosomal protein SA [Ascaris suum] Length = 299 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 51/277 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 L + + +LL G + +ME+Y++ R + THII L +T L Sbjct: 9 TLKEEDVMKLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKLLL-AARAV 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + V+ + A +++ A + + ++ G +TN Sbjct: 66 AAIENPADVCVVSARPYAQRALLKFAAHTGATPIFGRFTPGCLTNQ-------------- 111 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I+ P L+ V D + A+ EA + Sbjct: 112 -------------------------------IQKSFKEPRLLIVSDPRVDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTK 238 +P+++ +T+S VD IP N+ +SI L ++A I G + + D K Sbjct: 141 GVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWMLAREVLLIKGKMTRQTGFVLDDK 200 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + ++ + E++ + A E Sbjct: 201 EIMPDLYFYRDPDEQEKEEAVEARENKEPWGAAAAAE 237 >gi|114633293|ref|XP_001139319.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 2 [Pan troglodytes] Length = 258 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 14 LQMKEEHVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 71 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 72 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 117 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 118 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 145 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 146 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTIYREHPWEVMP 205 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + E G+ A PE Sbjct: 206 DLYFYRDPEEIEKEEQAAAEKVVTKEE--FQGEWTAPAPE 243 >gi|296190805|ref|XP_002743353.1| PREDICTED: 40S ribosomal protein SA-like [Callithrix jacchus] Length = 294 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + +A Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTKASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +TNS VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTNSPLRYVDIAIPYNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|102579652|gb|ABF70932.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 531 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G TN Sbjct: 59 YLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 KK R + L PD + ++ +R+ I EA Sbjct: 104 ----------ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|93116151|gb|ABE98782.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 531 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G TN Sbjct: 59 YLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 KK R + L PD + ++ +R+ I EA Sbjct: 104 ----------ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|114151652|ref|YP_740404.1| ribosomal protein S2 [Zea mays subsp. parviglumis] gi|93116103|gb|ABE98735.1| ribosomal protein S2 [Zea mays subsp. mays] gi|102567985|gb|ABF70869.1| ribosomal protein S2 [Zea mays subsp. parviglumis] Length = 531 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G TN Sbjct: 59 YLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 KK R + L PD + ++ +R+ I EA Sbjct: 104 ----------ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|94502563|ref|YP_588412.1| ribosomal protein S2 [Zea mays subsp. mays] gi|40795002|gb|AAR91046.1| ribosomal protein S2 [Zea mays] Length = 531 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G TN Sbjct: 59 YLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 KK R + L PD + ++ +R+ I EA Sbjct: 104 ----------ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|115278554|ref|YP_762330.1| ribosomal protein S2 [Sorghum bicolor] gi|114309675|gb|ABI60892.1| ribosomal protein S2 [Sorghum bicolor] Length = 447 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 48/265 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI RN I+D +T+ L+ A+ I Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAATH--LKVYIRGFRNGIAILDSDKTLICLRNAIHFIG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + GR F+ T +ME C+N S+W +G +TN + +K R Sbjct: 59 SLIRKKGRSFFLKTNHFFIYSIMEKM----WSCINDSQWKIGAFLTNS---YANPKKFR- 110 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 ++K +++ + PD + ++ +R+ I EA Sbjct: 111 ------------SRKNQIHF---------------GLNQQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLVASAAIDGIAR-----QH 230 R IPI ++VD+ + ++Y IP ND + LF + I R + Sbjct: 144 RSLIPIASLVDSTIPCEFYKRINYPIPANDP-ILFVYLFRHSITKTVILERKRINKKPRS 202 Query: 231 SYMGADTKSAGETVVHSKEGMQLEE 255 + KS ++HS++ E Sbjct: 203 HFSFCTEKSPAGIIIHSRKVSSWTE 227 >gi|194209702|ref|XP_001497153.2| PREDICTED: similar to ribosomal protein SA [Equus caballus] Length = 286 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 99/277 (35%), Gaps = 53/277 (19%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61 + + + + L +G G L + +ME+YI+ + + ++ +L +T L A + I Sbjct: 1 MKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRQSDGIYVTNLKRTWEKLLLAARAIV- 57 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + + +++++ V++ A + + ++ G TN Sbjct: 58 AIENPADVSVISSRNTDQRAVLKFAAATGATPIAGRFTPGTFTNQ--------------- 102 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 I+ P L+ V D + + EA + Sbjct: 103 ------------------------------IQAAFREPRLLVVTDPRADHQPLTEASYVN 132 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241 +P +A+ +T+S VD IP N+ + S+ L ++A + + S Sbjct: 133 LPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR-MRGTISSEHPWEVMPD 191 Query: 242 ETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + ++ + G+ A PE Sbjct: 192 LYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPE 228 >gi|34272|emb|CAA33112.1| unnamed protein product [Homo sapiens] gi|119584989|gb|EAW64585.1| ribosomal protein SA, isoform CRA_b [Homo sapiens] Length = 300 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 99/285 (34%), Gaps = 60/285 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKS-----QASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQVCGTVRAVLKFAAATGATPIAGRFTPGTFTNQ-------- 116 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 I+ P L+ V D + + Sbjct: 117 -------------------------------------IQAAFREPRLLVVTDPRADHQPL 139 Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSY 232 EA + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 TEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHP 199 Query: 233 MGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 WEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 242 >gi|307199481|gb|EFN80094.1| 40S ribosomal protein SA [Harpegnathos saltator] Length = 314 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 98/282 (34%), Gaps = 55/282 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER---NNTHIIDLSQTVPMLQKALQ 57 +AL + + +LL + G N N +MERY++ +R +IID+ T L A + Sbjct: 8 LALKEDDVTKLLVASAHLGAENV--NFQMERYVYKKRVDGAGINIIDIRHTWEKLLLAAR 65 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 I + + V+ + V++ A + + ++ G TN Sbjct: 66 AIV-AIEHPSEVFAVSCRHVGQRAVLKFAAHTGATPIAGRFTPGAFTNQ----------- 113 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 I+ P L+ V D + + I EA Sbjct: 114 ----------------------------------IQAAFREPRLLVVTDPSTDHQPITEA 139 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSY--M 233 + IP++A +T+S VD IP N S ++ L L+ + G + + + Sbjct: 140 SYVNIPVIAFCNTDSPLRFVDIAIPCNTKSVLTVGLMWWLLTREVLRLRGSIPRETKWDV 199 Query: 234 GADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE +E + + E + + PE Sbjct: 200 MVDLFFYRDPEEVQKEEQAAKEIAPAKEFTSTTVEATVPAPE 241 >gi|332209415|ref|XP_003253807.1| PREDICTED: 40S ribosomal protein SA-like [Nomascus leucogenys] Length = 295 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + V ++ G N Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPVAGRFTPGTFANQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAALREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSMGLMWWMLAWEVLCMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|291392819|ref|XP_002712802.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 95/278 (34%), Gaps = 51/278 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ ++ +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSEGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN + +L Sbjct: 66 V-AIENPADVNVISSRNTGQRAVLKFASATGATPIAGRFTPGTFTNQIQAAFRESRL--- 121 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + V D + + EA Sbjct: 122 ------------------------------------------LVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADT 237 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + E + ++ G+ A PE Sbjct: 200 ELYFYRDPEEIEKEEQAAVEKAVTKEEFQGEWTAPAPE 237 >gi|260945895|ref|XP_002617245.1| 40S ribosomal protein S0-A [Clavispora lusitaniae ATCC 42720] gi|269969647|sp|C4Y2C6|RSSA_CLAL4 RecName: Full=40S ribosomal protein S0 gi|238849099|gb|EEQ38563.1| 40S ribosomal protein S0-A [Clavispora lusitaniae ATCC 42720] Length = 263 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 92/231 (39%), Gaps = 55/231 (23%) Query: 1 MALPQ---FTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP+ T LL + V G +N + E Y++ R + ++I++++T + Sbjct: 1 MSLPESFALTAEDAKLLLAANVHLGSKNVQVH--NEPYVYKTRPDGVNVINIAKTWEKIV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + ++ ++++ V++ A + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNASDVVVCSSRTFGQRAVLKFASHTGATPIAGRFTPGNFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLVIVTDPRTDAQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+E+ + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKESSYVNIPVIALSDVDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183 >gi|317575807|ref|NP_001187066.1| 40S ribosomal protein SA [Ictalurus punctatus] gi|82217273|sp|Q90YS4|RSSA_ICTPU RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|15294011|gb|AAK95182.1|AF402808_1 40S ribosomal protein Sa [Ictalurus punctatus] Length = 317 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 96/281 (34%), Gaps = 55/281 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYVYKRKSDGIYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ ++ A + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRACLKFASGTGATTFAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + IP +A+ +T+S VD IP N+ S+ L ++A + G + Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 D + KE E + E G+ A V ++ Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVGKEE--FQGEWSAPVADI 238 >gi|225706622|gb|ACO09157.1| 40S ribosomal protein SA [Osmerus mordax] Length = 312 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 70/288 (24%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + L +G G N + +ME Y++ + + HII+L +T L A + I + Sbjct: 17 KFLAAGTHLGGTNV--DFQMEHYVYKRKSDGVHIINLKKTWEKLLLAARAIV-AIENPAD 73 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + +++++ V++ A S + ++ G TN Sbjct: 74 VCVISSRNTGQRAVLKFASASGATTFHGRFTPGTFTNQ---------------------- 111 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 I+ P L+ V D + + EA + IP +A+ Sbjct: 112 -----------------------IQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIAMC 148 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH--------------S 231 +T+S VD IP N+ S+ L ++A + I+R+H Sbjct: 149 NTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPE 208 Query: 232 YMGADTKSAGETVVHSKEGMQLEEDSQSSE---SSVLDGQEVAVVPEL 276 + + ++A E V KE Q E + ++E V D E VP + Sbjct: 209 EIEKEEQAAAEKAV-GKEEFQGEWTAPAAEFTQPEVADWSEGVAVPSV 255 >gi|93116059|gb|ABE98692.1| ribosomal protein S2 [Zea mays subsp. mays] Length = 531 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 43/244 (17%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + ++ YI C RN I+D +T+ L+ AL + Sbjct: 1 MTILSTVCTKLLCTNAHLGRRVAAHH--LKVYIRCFRNGIAILDSDKTLICLRNALDFVG 58 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRD 118 + + R F+ TK+ + AK + C+N S+W +G TN Sbjct: 59 YLICQKSRSFFLKTKNFFIYSI--MAKMWS--CINDSQWKIGAFFTNSY----------- 103 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 KK R + L PD + ++ +R+ I EA Sbjct: 104 ----------ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSSVILEAD 143 Query: 179 RLRIPIVAVVDTNSN-PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +IPI +VD+ + IP ND + LF + + ++ + G Sbjct: 144 RSQIPIAYLVDSTIPSHKRFTFTIPANDPLRLLVYLFRNSITKTV---RQKRTAINGPRA 200 Query: 238 KSAG 241 + G Sbjct: 201 GARG 204 >gi|146165118|ref|XP_001014441.2| ribosomal protein S2 containing protein [Tetrahymena thermophila] gi|319443357|pdb|2XZM|B Chain B, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 gi|319443392|pdb|2XZN|B Chain B, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 2 gi|146145600|gb|EAR94196.2| ribosomal protein S2 containing protein [Tetrahymena thermophila SB210] gi|315570293|tpg|DAA33965.1| TPA_exp: 40S ribosomal protein rpS0e [Tetrahymena thermophila] Length = 241 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 50/215 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL S N +M+RYI + N H I++ +T ++ A +VI+ V Sbjct: 10 IKRLLASNCHQ--ATINLNNQMKRYISHKGVNGIHYINIEETWQKIKLAARVIA-AVQHP 66 Query: 67 GRILFVATKSQASDCVMEAAKRSAQ-YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ V ++ ++ A + +S+W G +TN++T+ Sbjct: 67 EDVMVVCSRIYGQRAAIKFAGYTHCKSTSSSRWTPGTLTNYQTLKYEE------------ 114 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P ++ V D + AI+EA + IP++ Sbjct: 115 ---------------------------------PRVLIVTDPRSDFQAIKEASYVNIPVI 141 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 A+ D++S VD VIP N+ S+ SI++ ++A Sbjct: 142 ALCDSDSPLAYVDVVIPCNNRSTESISMIYWMIAR 176 >gi|229891596|sp|A6NA00|RSSA_ORNPR RecName: Full=40S ribosomal protein SA gi|149287168|gb|ABR23483.1| 40S ribosomal protein SA [Ornithodoros parkeri] Length = 299 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 92/271 (33%), Gaps = 49/271 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + L +R+ L + G + +M++Y F R + ++IDL +T L A + I Sbjct: 8 LGLKDDDVRRFLTAKTHIG--TAQLDFQMQQYCFKRRSDGVYLIDLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPAEVCAISSRPYGQRAVLKFASFTGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVCDPREDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A +T++ VD IP N+ + SI L ++ + + DT Sbjct: 140 VNIPVIAFCNTDACLRYVDVAIPCNNKAQHSIGLMWWMLTREVLRMRGSIIREIPWDTMV 199 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 +E + E+ E S+ + E Sbjct: 200 DLFFYRDPEEAEKEEQTQVVPERSIKEAPEF 230 >gi|109074472|ref|XP_001101061.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Macaca mulatta] gi|297292709|ref|XP_002804129.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Macaca mulatta] Length = 295 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLVARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPWLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLHYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|308487826|ref|XP_003106108.1| CRE-RPS-0 protein [Caenorhabditis remanei] gi|308254682|gb|EFO98634.1| CRE-RPS-0 protein [Caenorhabditis remanei] Length = 276 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 104/272 (38%), Gaps = 51/272 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 AL + + +LL + G N N +M++Y++ R + +II++ +T L Sbjct: 9 ALTEEDVMKLLATQAHLGSTN--LNFQMQQYVYKRRFDGPNIINVKKTWEKLLL-AARAI 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V ++ V+ + A +++ A + + ++ G +TN Q + ++ Sbjct: 66 AAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTN-----QIQKTFKE-- 118 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 P L+ + D + A+ EA + Sbjct: 119 --------------------------------------PRLLVISDPRIDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA--AIDGIARQHSYMGADTK 238 +P+++ V+T S L+D +P N+ RSI L ++A + G + + D K Sbjct: 141 GVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLDGK 200 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + ++ + E++ + + V + QE Sbjct: 201 EIMPDLYFYRDPTETEKEETGAHAEVTETQEF 232 >gi|71402795|ref|XP_804266.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|70867145|gb|EAN82415.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] Length = 245 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 102/270 (37%), Gaps = 50/270 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + + + +++L+ G +N M++YI + T+IIDL T L A +VI Sbjct: 11 LRMKEGDVQKLVAMHCHLGTKNRS--NAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +T+ + + ++ + +++ G TN Q +K Sbjct: 69 A-AVENPQDVTVCSTRLFGQRAIFKFSQLVGTSFLAGRFIPGTFTN-----QIQKKFMQ- 121 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + A++EA Sbjct: 122 ---------------------------------------PRVLLVTDPRTDHQALREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A DT++ + VD IP N+ SI++ L+A + + D K Sbjct: 143 VNIPVIAFCDTDAPLEFVDIAIPCNNRGRYSISMMYWLLAREVLRLRGTIPRSVPWDVKV 202 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +E ++ EE +Q++ + V + E Sbjct: 203 DLFFYRDPEEALKHEEVNQAA-APVAEADE 231 >gi|16603922|gb|AAL27207.1| ribosomal protein subunit 2 [Monotropastrum humile] Length = 120 Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 3/120 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ + ++ + L + T +D V+ AK++ + VN KWLGG++TNW T Sbjct: 1 FLSEACDLVFEAASKEKQFLIIGTNKYIADLVLRYAKKARCHYVNKKWLGGILTNWLTTE 60 Query: 111 QSIQKLRDLE---ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 I KLRDLE ++ + K+ + + ++ L+ GI+ M LPD++ ++D Sbjct: 61 TRINKLRDLEIEQKMDELKQIIIPKRNDIRLRKQLIHLQAYFGGIKYMTRLPDIVIILDQ 120 >gi|126697324|gb|ABO26619.1| raminin receptor [Haliotis discus discus] Length = 324 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I + L G N + +ME Y+F + + +II+L +T + + I Sbjct: 8 LSLKEEDITKFLACSTHLGSTNV--DFQMESYVFKRKPDGVYIINLKKTWEKMLLTARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + ++ + V++ A + + ++ G TN Sbjct: 66 A-AIENPADVCVISARPYGQRAVLKFASATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRIDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ ++SI L L+A + Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKGAQSIGLMWWLMAREVLR 184 >gi|161761214|pdb|3BCH|A Chain A, Crystal Structure Of The Human Laminin Receptor Precursor Length = 253 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 50/262 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 41 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 98 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 99 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 144 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 145 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 172 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+S VD IP N+ + S+ L ++A + + S Sbjct: 173 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR-MRGTISREHPWEVM 231 Query: 240 AGETVVHSKEGMQLEEDSQSSE 261 E ++ EE + + + Sbjct: 232 PDLYFYRDPEEIEKEEQAAAEK 253 >gi|307107330|gb|EFN55573.1| hypothetical protein CHLNCDRAFT_134066 [Chlorella variabilis] Length = 288 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 81/217 (37%), Gaps = 49/217 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 ++ LL S G +N MERY++ RN + +L++T LQ A ++I + Sbjct: 11 VQMLLASQAHLGTKN--CTAAMERYVYRRRNDGIFVFNLAKTWEKLQLAARIIV-AIENP 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ ++ + V++ A S + G TN + + ++ Sbjct: 68 QDIVAISARPYGQRAVLKFAHYSGAKATVGRHTPGAFTN--QIQKGFEE----------- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + +I+EA + IP++A Sbjct: 115 --------------------------------PRLLIVTDPRTDHQSIKEAAYMNIPVIA 142 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 DT+S+ VD IP N+ SI + L+ + Sbjct: 143 FCDTDSDLXGVDVAIPANNKGKHSIGVLYYLLTRMVL 179 >gi|291399728|ref|XP_002716267.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ +++ +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDSIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + G TN Sbjct: 66 V-AIENPADVSVMSSRNTGQRAVLKFAAATGATPIAGSFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|297742949|emb|CBI35816.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 84/240 (35%), Gaps = 49/240 (20%) Query: 29 MERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAK 87 MERY+F RN +II+L +T LQ A +VI + I+ + + V++ A+ Sbjct: 1 MERYVFKRRNDGIYIINLGKTWEKLQLAARVIV-AIENPKDIIVQSARPYGQRAVLKFAQ 59 Query: 88 RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKR 147 + + + + G TN +L+ Sbjct: 60 YTGAHAIAGRHTPGTFTN--------------------------------------QLQT 81 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 + P L+ + D + I+EA IP +A DT+S VD IP N+ Sbjct: 82 SF-------SEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKG 134 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 SI L+A + R+ G + + + E++ ++ G Sbjct: 135 KHSIGCLFWLLARMVLQ--MRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYG 192 >gi|229891611|sp|A2Q0U8|RSSA_SOLSE RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|124300851|dbj|BAF45921.1| ribosomal protein Sa [Solea senegalensis] Length = 313 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 107/296 (36%), Gaps = 68/296 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +M+ Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMDHYVYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLLVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L ++A + I+R+H Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWDVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKE--GMQLEEDSQSSESSVLDGQEVAVVPEL 276 + + ++A E V +E G ++ ++ V D E VP + Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWSAPPAEFAQPEVADWSEGVAVPSV 255 >gi|73989786|ref|XP_860584.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 9 [Canis familiaris] Length = 276 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 84/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +P +A+ +T+S VD IP N+ + S+ L ++A + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR 184 >gi|16603886|gb|AAL27191.1| ribosomal protein subunit 2 [Sarcodes sanguinea] Length = 118 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++S ++G + L V TK + +D V+ AA ++ + VN KW+GGM+TNW Sbjct: 1 FLSEACDLVSAAASQGKQFLIVGTKKRVADLVVRAAIKARCHYVNKKWIGGMLTNWSITE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + + K RD E + K++ ++R + L GI+ M GLPD++ ++D Sbjct: 61 KRLHKFRDVRMEQKMGRLKSIPKRDVAKLKRXLYHFQTYLGGIQYMMGLPDIVIILDQ 118 >gi|198417001|ref|XP_002126356.1| PREDICTED: similar to 67kD laminin receptor [Ciona intestinalis] Length = 298 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 99/292 (33%), Gaps = 66/292 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + L + + ++L + G + +ME+Y++ +R + II+L +T + A + I Sbjct: 8 LQLKEDDVTKMLSATTHIG--APNCDFQMEQYVYKQRQDGVFIINLKKTWEKIMLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++++ +++ A + ++ G TN Sbjct: 66 V-AIENPADICVISSRQYGQRAILKFASATGATPFAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + I E+ Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPITESSY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA------------ 227 + IP++A+ +T+S VD IP N+ S S+ L L+A + Sbjct: 140 VNIPLIALCNTDSPIRYVDICIPCNNKSKHSVGLMWWLLAREVLRLRGTIPRSQPWDVMC 199 Query: 228 -----RQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 R + D + A E + ++ + +E D E ++ P Sbjct: 200 DLYFYRDAEEIEKDEQVAAEKEHQKELEVETTQPEWGTEQVQQDWAESSIQP 251 >gi|297679374|ref|XP_002817522.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] gi|297679376|ref|XP_002817523.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] gi|297679378|ref|XP_002817524.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Pongo abelii] Length = 295 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ +++ +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDSIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGERAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD P N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIANPCNNKGAHSVGLMWWMLAQKVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYLYRDPEETEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|297666198|ref|XP_002811409.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] gi|297666200|ref|XP_002811410.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] gi|297666202|ref|XP_002811411.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Pongo abelii] gi|297666204|ref|XP_002811412.1| PREDICTED: 40S ribosomal protein SA-like isoform 4 [Pongo abelii] Length = 295 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 100/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD VIP ++ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIVIPRSNKGAHSVGLMWWMLAREVLCMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|71403370|ref|XP_804492.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|71406414|ref|XP_805747.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|70867494|gb|EAN82641.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] gi|70869274|gb|EAN83896.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] gi|322828975|gb|EFZ32562.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] Length = 245 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 102/270 (37%), Gaps = 50/270 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + + + +++L+ G +N M++YI + T+IIDL T L A +VI Sbjct: 11 LRMKEGDVQKLVAMHCHLGTKNRS--NAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V + +T+ + + ++ + +++ G TN Q +K Sbjct: 69 A-AVENPQDVTVCSTRLFGQRAIFKFSQLVGTSFLAGRFIPGTFTN-----QIQKKFMQ- 121 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + A++EA Sbjct: 122 ---------------------------------------PRVLLVTDPRTDHQALREASL 142 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP++A DT++ + VD IP N+ SI++ L+A + + D K Sbjct: 143 VNIPVIAFCDTDAPLEFVDIAIPCNNRGRYSISMMYWLLAREVLRLRGTIPRSVPWDVKV 202 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +E ++ EE +Q++ + V + E Sbjct: 203 DLFFYRDPEEALKHEEVNQAA-APVAEVDE 231 >gi|226474642|emb|CAX77568.1| stubarista [Schistosoma japonicum] Length = 279 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 102/280 (36%), Gaps = 58/280 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + L +R +L + V G N N +M Y+ ++N HII L +T + + + I Sbjct: 8 LELSAEDLRLMLAAHVHVGETN--MNFQMSTYVHGRTKDNFHIIKLDKTWEKILLSARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + + ++ + V++ A + + ++ G TN K Sbjct: 66 A-AIDTASDVFAIGSRPFSQRAVLKFANYTGATAMAGRFTPGAFTNQKQ----------- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + R+ P L+ V D + A+ EA Sbjct: 114 -----------------SCFRE-----------------PRLLVVSDPLSDHQAVMEASS 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGA-- 235 + +P++A+ +T+S VD VIP N+ S+ SIA+ +A I G + Sbjct: 140 VNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFLAREVRRIRGEDTRLQQWSVLP 199 Query: 236 -----DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + E V E +LE +++ + EV Sbjct: 200 DLFLYRDPNEEEQNVEDPEDARLEPVIPGADAEAAETWEV 239 >gi|254242353|ref|ZP_04935675.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 2192] gi|126195731|gb|EAZ59794.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 2192] Length = 93 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 3/96 (3%) Query: 155 MGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 MGGLPD +FV+D + E++AI EA +L IP++ VVDTNS+P+ VDYVIPGNDD+ R++ L+ Sbjct: 1 MGGLPDALFVIDVDHERIAITEANKLGIPVIGVVDTNSSPEGVDYVIPGNDDAIRAVQLY 60 Query: 215 CDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEG 250 + +A A I G +Q + AD + E S EG Sbjct: 61 LNSMAEAVIRG--KQGAATSAD-EFVEEAPAESAEG 93 >gi|224503676|ref|ZP_03671983.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL R2-561] Length = 65 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 43/64 (67%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 +P +++QLLE+GV FGH+ WNPKM++YIF ERN +IIDL +TV + +A + + Sbjct: 1 MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREV 60 Query: 63 VARG 66 + Sbjct: 61 ASDN 64 >gi|149018243|gb|EDL76884.1| rCG25653, isoform CRA_g [Rattus norvegicus] Length = 246 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 84/225 (37%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +P +A+ +T+S VD IP N+ + S+ L ++A + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR 184 >gi|255712075|ref|XP_002552320.1| KLTH0C02112p [Lachancea thermotolerans] gi|269969650|sp|C5DDM1|RSSA_LACTC RecName: Full=40S ribosomal protein S0 gi|238933699|emb|CAR21882.1| KLTH0C02112p [Lachancea thermotolerans] Length = 251 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 91/231 (39%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + V G +N + E Y+F R + +++++ +T + Sbjct: 1 MSLPATFDLTPEDAQLLLAANVHLGSKNVQVHQ--EPYVFKTRPDGVNVVNVGKTWEKIV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + ++ +++++ V++ + + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNPEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLVIVTDPRSDAQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+E+ + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKESSYVNIPVIALTDLDSPSEYVDVAIPCNNKGKHSIGLIWYLLAREVLR 183 >gi|82905443|ref|XP_921694.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Mus musculus] gi|148671032|gb|EDL02979.1| mCG115729 [Mus musculus] Length = 295 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G N + +ME+YI+ + + +II+L +T L A + + Sbjct: 8 LQMKEEDVFKFLAAGTHLGGTNLEF--QMEQYIYKRKSDGIYIINLKRTWEKLLLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPPDVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDMAIPCNNKGAHSVGLMKWMLAREVLCMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTTPAPE 237 >gi|321467258|gb|EFX78249.1| hypothetical protein DAPPUDRAFT_320706 [Daphnia pulex] Length = 301 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 87/225 (38%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G N + +ME+Y++ R + HII+L +T L A + I Sbjct: 8 LSLKEDDVTKMLAATTHIGSTNV--DFQMEQYVYKRRSDGVHIINLRRTYEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + V+++ Q ++ A + + ++ G TN Sbjct: 66 V-AIENSADVFVVSSRPQGQRAALKFASYTKATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ ++D + I EA Sbjct: 112 --------------------------------IQAAFREPRLLVIMDPRADHQPIVEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ +S SI L ++A + Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKASHSIGLMFYMLAREVLR 184 >gi|332221769|ref|XP_003260037.1| PREDICTED: 40S ribosomal protein SA-like [Nomascus leucogenys] Length = 365 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 99/279 (35%), Gaps = 53/279 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 78 LQMKEEDVLNFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWGKLLLAARAI 135 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 136 V-AIENPADVSVISSRNTGQRAVLKFAATTGATPIAGRFTPGTFTNQ------------- 181 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 182 --------------------------------IQAAFREPWLLVVTDPRADHQPLTEASY 209 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+ VD IP N+ + S+ L ++A + + S Sbjct: 210 VNLPTIALCNTDFPLRYVDIAIPCNNKGAHSVGLMWWMLAWEVLR-MRGTISREHPWEPM 268 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + ++ + G+ A PE Sbjct: 269 PDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPE 307 >gi|17554768|ref|NP_497978.1| Ribosomal Protein, Small subunit family member (rps-0) [Caenorhabditis elegans] gi|1173295|sp|P46769|RSSA_CAEEL RecName: Full=40S ribosomal protein SA gi|3873741|emb|CAA86061.1| C. elegans protein B0393.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 276 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 104/271 (38%), Gaps = 51/271 (18%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 AL + + +LL + G N N +M++Y++ R + +II++ +T L Sbjct: 9 ALTEEDVMKLLATQAHLGSTN--LNFQMQQYVYKRRFDGPNIINVKKTWEKLLL-AARAI 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 V ++ V+ + A +++ A + + ++ G +TN Q + ++ Sbjct: 66 AAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTN-----QIQKTFKE-- 118 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 P L+ + D + A+ EA + Sbjct: 119 --------------------------------------PRLLVISDPRIDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA--AIDGIARQHSYMGADTK 238 +P+++ V+T S L+D +P N+ RSI L ++A + G + + + K Sbjct: 141 GVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGK 200 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + ++ + E++ + + V + QE Sbjct: 201 EIMPDLYFYRDPTETEKEETGAHADVAEAQE 231 >gi|332240718|ref|XP_003269532.1| PREDICTED: 40S ribosomal protein SA-like [Nomascus leucogenys] Length = 295 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 97/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + T+II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGTYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L V D + + EA Sbjct: 112 --------------------------------IQAAFQEPRLPVVTDPRADHQPLTEASH 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 +P +A+ +T+S VD IP N+ + S+ L ++ + G + Sbjct: 140 FNLPTIALCNTDSPLHYVDIAIPCNNKGAHSVGLMWWMLTQEVLCMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DFCFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|291400871|ref|XP_002716807.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 97/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIHKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPQLLVVTDPQADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDITIPCNNKGAHSVGLMWWMLAREVLHMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|168188045|ref|ZP_02622680.1| 30S ribosomal protein S2 [Clostridium botulinum C str. Eklund] gi|169294137|gb|EDS76270.1| 30S ribosomal protein S2 [Clostridium botulinum C str. Eklund] Length = 62 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 41/61 (67%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + +++QLLE+GV FGH+ WNPKM YIF ERN +IIDL +TV +++A + + Sbjct: 1 MSIISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYEFVKSV 60 Query: 63 V 63 V Sbjct: 61 V 61 >gi|114654607|ref|XP_510146.2| PREDICTED: hypothetical protein [Pan troglodytes] Length = 260 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+Y + + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYNYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Q + Sbjct: 66 I-AIENPADVSVISSRNTGQRAVLKFAAATGSTPIAGRFTPGTFTN-----QVQAAFWE- 118 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V D + + EA Sbjct: 119 ---------------------------------------PRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ +RS+ L +A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGARSVGLMWWTLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|45185548|ref|NP_983264.1| ACL140Cp [Ashbya gossypii ATCC 10895] gi|74695136|sp|Q75CQ9|RSSA_ASHGO RecName: Full=40S ribosomal protein S0 gi|44981266|gb|AAS51088.1| ACL140Cp [Ashbya gossypii ATCC 10895] Length = 253 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + V G +N + E Y++ R + +II + +T + Sbjct: 1 MSLPATFDLTPEDAQLLLAANVHLGSKNVQVHQ--EPYLYKTRPDGVNIIHIGKTWEKIV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + ++ +++++ V++ + + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNAEDVVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLVIVTDPRSDAQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+EA + IP++A+ D S + VD IP N+ SI L L+A + Sbjct: 133 IKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLR 183 >gi|328677095|gb|AEB31270.1| 40S ribosomal protein Sa-like protein [Epinephelus bruneus] Length = 229 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 50/268 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYVYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPGDVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP +A+ +T+S VD IP N+ S+ L ++A + + S Sbjct: 140 VNIPTIALCNTDSPLRYVDISIPCNNKGHHSVGLMWWMLAREVLR-MRGTISREHPWEVM 198 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 E ++ EE + + ++ + Sbjct: 199 PDLYFYRDPEEIEKEEQAAAEKAVGKEE 226 >gi|328703350|ref|XP_001945147.2| PREDICTED: 40S ribosomal protein SA-like [Acyrthosiphon pisum] Length = 310 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 82/226 (36%), Gaps = 51/226 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN--NTHIIDLSQTVPMLQKALQV 58 + L + + ++L + G N N +ME+Y + +RN +I +L++T L A + Sbjct: 8 LGLKEDDVTKMLAATTHLGAENV--NFQMEQYAY-KRNSRGLNIFNLNKTWEKLLLAARA 64 Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 I V I ++++ V++ A + + ++ G TN Sbjct: 65 IV-AVEHPSEIFVISSRPYGQRAVLKFAAYTGATPIAGRFTPGAFTNQ------------ 111 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 I+ P L+ V D + I EA Sbjct: 112 ---------------------------------IQAAFREPRLLVVTDPATDHQPITEAS 138 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ + ++ VD IP N+ S SI L +A + Sbjct: 139 YVNIPVIALCNADTPLRYVDIAIPCNNKSPHSIGLMWWFLAREVLR 184 >gi|239788258|dbj|BAH70817.1| ACYPI004271 [Acyrthosiphon pisum] Length = 310 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 82/226 (36%), Gaps = 51/226 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN--NTHIIDLSQTVPMLQKALQV 58 + L + + ++L + G N N +ME+Y + +RN +I +L++T L A + Sbjct: 8 LGLKEDDVTKMLAATTHLGAENV--NFQMEQYAY-KRNSRGLNIFNLNKTWEKLLLAARA 64 Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 I V I ++++ V++ A + + ++ G TN Sbjct: 65 IV-AVEHPSEIFVISSRPYGQRAVLKFAAYTGATPIAGRFTPGAFTNQ------------ 111 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 I+ P L+ V D + I EA Sbjct: 112 ---------------------------------IQAAFREPRLLVVTDPATDHQPITEAS 138 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ + ++ VD IP N+ S SI L +A + Sbjct: 139 YVNIPVIALCNADTPLRYVDIAIPCNNKSPHSIGLMWWFLAREVLR 184 >gi|225708482|gb|ACO10087.1| 40S ribosomal protein SA [Osmerus mordax] Length = 310 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 106/296 (35%), Gaps = 68/296 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G + + +ME Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNM-DFQMEHYVYKRKCDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGSTTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L +++ + I+R+H Sbjct: 140 VNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKE--GMQLEEDSQSSESSVLDGQEVAVVPEL 276 + + ++A E V +E G + ++ V D E VP + Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWTAPQADFAQPEVADWSEGVPVPSV 255 >gi|170589890|ref|XP_001899706.1| laminin receptor 1 [Brugia malayi] gi|158592832|gb|EDP31428.1| laminin receptor 1, putative [Brugia malayi] Length = 322 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 51/233 (21%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +LL G + +ME+Y++ R + HII L +T L + G Sbjct: 38 KLLACQTHVG--AANCDFQMEQYVWKRRADGIHIIHLRKTWEKLLL-AARAIAAIDNPGD 94 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + V+ + A +++ A + + ++ G +TN Q ++ ++ Sbjct: 95 VCVVSARPYAQRALLKFAAHTGSTPIFGRFTPGCLTN-----QIQKQFKE---------- 139 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 P L+ V D + A+ EA + +P+++ Sbjct: 140 ------------------------------PRLLIVSDPRVDHQAVTEASYVGVPVISFC 169 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKS 239 +T+S +D IP N+ +SI L L+A I G + + D K Sbjct: 170 NTDSPLKFIDIAIPCNNKGVQSIGLMWWLLAREVLLIKGKMTRQTGFVLDDKE 222 >gi|291396944|ref|XP_002714857.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 98/279 (35%), Gaps = 53/279 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAAGAT 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVMSSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTGPRVDHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+S VD IP N+ + S+ L ++A + + S Sbjct: 140 VNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGLMWWMLAQEVLR-MRGTISCEHPWEVM 198 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + ++ + G+ A PE Sbjct: 199 PDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPE 237 >gi|255640490|gb|ACU20531.1| unknown [Glycine max] Length = 80 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 41/73 (56%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 + +++E+GV FGH WNPKM YI +R HII+L +T L +A ++ D + Sbjct: 7 NIILEEMMEAGVHFGHGTRKWNPKMSPYISAKRKGIHIINLIRTARFLSEACDLVFDAAS 66 Query: 65 RGGRILFVATKSQ 77 G + L V TK + Sbjct: 67 EGKQFLIVGTKKK 79 >gi|229891763|sp|A8Q2H5|RSSA_BRUMA RecName: Full=40S ribosomal protein SA Length = 301 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 51/233 (21%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +LL G + +ME+Y++ R + HII L +T L + G Sbjct: 17 KLLACQTHVG--AANCDFQMEQYVWKRRADGIHIIHLRKTWEKLLL-AARAIAAIDNPGD 73 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + V+ + A +++ A + + ++ G +TN Q ++ ++ Sbjct: 74 VCVVSARPYAQRALLKFAAHTGSTPIFGRFTPGCLTN-----QIQKQFKE---------- 118 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 P L+ V D + A+ EA + +P+++ Sbjct: 119 ------------------------------PRLLIVSDPRVDHQAVTEASYVGVPVISFC 148 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKS 239 +T+S +D IP N+ +SI L L+A I G + + D K Sbjct: 149 NTDSPLKFIDIAIPCNNKGVQSIGLMWWLLAREVLLIKGKMTRQTGFVLDDKE 201 >gi|294655441|ref|XP_457580.2| DEHA2B14564p [Debaryomyces hansenii CBS767] gi|199429959|emb|CAG85591.2| DEHA2B14564p [Debaryomyces hansenii] Length = 257 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 99/265 (37%), Gaps = 61/265 (23%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + LL + V G +N Y++ R + ++I++ +T + A ++I+ + Sbjct: 15 KLLLAANVHLGSKNVQ------PYVYKTRPDGVNVINVGKTWEKIVLAARIIA-AIPNAA 67 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + +T++ V++ A + + ++ G TN+ T + ++ Sbjct: 68 DVAVCSTRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYIT-----RSFKE--------- 113 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+E+ + IP++A+ Sbjct: 114 -------------------------------PRLVVVTDPRTDFQAIKESSYVNIPVIAL 142 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT------KS 239 D +S + VD IP N+ SI L LVA + GI + + + Sbjct: 143 TDMDSPSEYVDVAIPCNNKGKHSIGLIWWLVAREVLRLRGIIPDRTTEWSVMPDLYFYRD 202 Query: 240 AGETVVHSKEGMQLEEDSQSSESSV 264 E ++ E ++ ++ ++ + Sbjct: 203 PEEIEQNATEDIKTDDVEEAPAADA 227 >gi|291382887|ref|XP_002707960.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 295 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPQADHQPLMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD I N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLHYVDIAILCNNKGAHSVGLMWWMLAQEVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPEPE 237 >gi|73999364|ref|XP_851104.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) [Canis familiaris] Length = 358 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 95/278 (34%), Gaps = 55/278 (19%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61 + + + + L +G G L + +ME+YI+ + + + I+L +T L A + I Sbjct: 1 MKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYTINLKRTWEKLLLAARAIV- 57 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + + ++++ V++ A + + ++ G TN Sbjct: 58 AIENPADVGVTSSRNTGQRAVLKFAAATGATPIAGRFTPGAFTNQ--------------- 102 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 I+ P L V D + + EA L Sbjct: 103 ------------------------------IQAAFPEPRLPVVTDPRADHQPLTEASYLN 132 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGA--DT 237 +P +A+ +T+S VD IP N+ + S+ L ++A + G + D Sbjct: 133 LPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMLGTISREHPWEVMPDL 192 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + KE E + + E G+ A PE Sbjct: 193 YFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 228 >gi|288932311|ref|YP_003436371.1| ribosomal protein S2 [Ferroglobus placidus DSM 10642] gi|288894559|gb|ADC66096.1| ribosomal protein S2 [Ferroglobus placidus DSM 10642] Length = 204 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 50/216 (23%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + L +GV G + + M+R+I+ R + +I+D+ L+ A ++++ + Sbjct: 20 EYLAAGVHIGTQIKTGD--MKRFIYKVRQDGLYILDIRMLDERLKLAGKLLAR--YEPSK 75 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 +L VA + VM AK + V +++ G +TN L++ +E Sbjct: 76 VLAVAARQYGQKPVMMFAKVTGAEYVVGRFIPGTLTNPA--------LKEYKE------- 120 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 P+++ V D +K A+ EA + IP+VA+ Sbjct: 121 ------------------------------PEIVIVTDPAIDKQAVIEASEVGIPVVALC 150 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DTN+N +D+VIP N+ +++AL ++A + Sbjct: 151 DTNNNTANIDFVIPTNNKGRKALALVYWILAREVLR 186 >gi|41179035|ref|NP_958391.1| ribosomal protein S2 [Chlamydomonas reinhardtii] gi|32699654|sp|O47027|RR2A_CHLRE RecName: Full=30S ribosomal protein S2, chloroplastic gi|2887384|emb|CAA76245.1| ORF570 (rps2-like) [Chlamydomonas reinhardtii] gi|28269758|tpg|DAA00936.1| TPA_inf: ribosomal protein S2 [Chlamydomonas reinhardtii] Length = 570 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 24/173 (13%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTH--------------IIDLSQ 47 A + ++RQ+L+SG+ +G + N +M+ Y++ + T +I+L + Sbjct: 309 AFVRSSLRQMLKSGMHYGEKAIKCNARMKNYVWTRKKGTDTKVEARPLIKKGRNLINLLK 368 Query: 48 TVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNW 106 T L KAL ++ A+G LFV TK AS V AA S + VN++WLGGM+TNW Sbjct: 369 TRRCLTKALAQLTKYAAKGKTFLFVGTKKAASGLVARAALFSKKAFFVNTRWLGGMLTNW 428 Query: 107 KTVSQSIQKLR-----DLEELLNKENQGFTKK----ERLNIERKRDKLKRALD 150 KT+ +SI K+R + + + T K ++ + RK+ KL Sbjct: 429 KTILKSISKIRPILKEKQMIIKDILEKRQTIKARLIQKALLLRKKSKLMLKKG 481 >gi|16603888|gb|AAL27192.1| ribosomal protein subunit 2 [Sarcodes sanguinea] gi|16603890|gb|AAL27193.1| ribosomal protein subunit 2 [Sarcodes sanguinea] Length = 118 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ ++G + L V TK + +D V+ AA ++ + VN KW+GGM+TNW Sbjct: 1 FLSEACDLVFAAASQGKQFLIVGTKKRVADLVVRAAIKARCHYVNKKWIGGMLTNWSITE 60 Query: 111 QSIQKLRD-LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + + K RD E + K++ ++ K + L GI+ M GLPD++ ++D Sbjct: 61 KRLHKFRDVRMEQKMGRLKSIPKRDVAKLKIKLYHFQTYLGGIQYMMGLPDIVIILDQ 118 >gi|296215290|ref|XP_002754121.1| PREDICTED: 40S ribosomal protein SA-like [Callithrix jacchus] Length = 285 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 101/279 (36%), Gaps = 53/279 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G N + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LKMKEEDVLKFLAAGTHLGDTN--LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A S + ++ G TN Sbjct: 66 V-AIENPADVCVMSSRNTGQRAVLKFAAASGATPIAGRFPPGSFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + A Sbjct: 112 --------------------------------IQAAFQEPWLLVVTDPRADHQLLTVASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+S VD IP N+ + S+ L ++A + + S+ Sbjct: 140 VNLPTIALCNTDSPLLYVDIAIPCNNKGAHSVGLMWWMLAREILH-MCGTISWEHPWEVM 198 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + ++ + G+ A PE Sbjct: 199 PDLYFYRDPEDIEKEEQAAAEKAVTKEEFQGEWTAPAPE 237 >gi|226474240|emb|CAX71606.1| stubarista [Schistosoma japonicum] Length = 279 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 58/276 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + L +R +L + V G N N +M Y+ ++N HII L +T + + + I Sbjct: 8 LELSAEDLRLMLAAHVHVGETN--MNFQMSTYVHGRTKDNFHIIKLDKTWEKILLSARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + + ++ + V++ A + + ++ G TN K Sbjct: 66 A-AIDTASDVFAIGSRPFSQRAVLKFANYTGATAMAGRFTPGAFTNQKQ----------- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + R+ P L+ V D + A+ EA Sbjct: 114 -----------------SCFRE-----------------PRLLVVSDPLSDHQAVMEASS 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGA-- 235 + +P++A+ +T+S VD VIP N+ S+ SIA+ +A I G + Sbjct: 140 VNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFLAREVRRIRGEDTRLQQWSVLP 199 Query: 236 -----DTKSAGETVVHSKEGMQLEEDSQSSESSVLD 266 + E V E +LE +++ + Sbjct: 200 DLFLYRDPNEEEQNVEDPEDARLEPVIPGADAEPAE 235 >gi|323133469|gb|ADX30745.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKK-ERL 136 +D V AA ++ + VN KWLGGM+TNW T + + K RDL+ KK + Sbjct: 1 FADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLYKFRDLKIKQKMGRLKQLKKRDVT 60 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 61 RLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|226474636|emb|CAX77565.1| stubarista [Schistosoma japonicum] gi|226474640|emb|CAX77567.1| stubarista [Schistosoma japonicum] gi|226474646|emb|CAX77570.1| stubarista [Schistosoma japonicum] Length = 279 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 58/276 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + L +R +L + V G N N +M Y+ ++N HII L +T + + + I Sbjct: 8 LELSAEDLRLMLAAHVHVGETN--MNFQMSTYVHGRTKDNFHIIKLDKTWEKILLSARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + + ++ + V++ A + + ++ G TN K Sbjct: 66 A-AIDTASDVFAIGSRPFSQRAVLKFANYTGATAMAGRFTPGAFTNQKQ----------- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + R+ P L+ V D + A+ EA Sbjct: 114 -----------------SCFRE-----------------PRLLVVSDPLSDHQAVMEASS 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGA-- 235 + +P++A+ +T+S VD VIP N+ S+ SIA+ +A I G + Sbjct: 140 VNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFLAREVRRIRGEDTRLQQWSVLP 199 Query: 236 -----DTKSAGETVVHSKEGMQLEEDSQSSESSVLD 266 + E V E +LE +++ + Sbjct: 200 DLFLYRDPNEEEQNVEDPEDARLEPVIPGADAEAAE 235 >gi|74900189|sp|Q5DA90|RSSA_SCHJA RecName: Full=40S ribosomal protein SA gi|56758252|gb|AAW27266.1| SJCHGC06078 protein [Schistosoma japonicum] gi|226474238|emb|CAX71605.1| stubarista [Schistosoma japonicum] gi|226474626|emb|CAX77560.1| stubarista [Schistosoma japonicum] gi|226474628|emb|CAX77561.1| stubarista [Schistosoma japonicum] gi|226474630|emb|CAX77562.1| stubarista [Schistosoma japonicum] gi|226474634|emb|CAX77564.1| stubarista [Schistosoma japonicum] gi|226474638|emb|CAX77566.1| stubarista [Schistosoma japonicum] gi|226474644|emb|CAX77569.1| stubarista [Schistosoma japonicum] gi|226474648|emb|CAX77571.1| stubarista [Schistosoma japonicum] gi|226474650|emb|CAX77572.1| stubarista [Schistosoma japonicum] gi|226474652|emb|CAX77573.1| stubarista [Schistosoma japonicum] gi|226474654|emb|CAX77574.1| stubarista [Schistosoma japonicum] gi|226474656|emb|CAX77575.1| stubarista [Schistosoma japonicum] Length = 279 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 58/276 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + L +R +L + V G N N +M Y+ ++N HII L +T + + + I Sbjct: 8 LELSAEDLRLMLAAHVHVGETN--MNFQMSTYVHGRTKDNFHIIKLDKTWEKILLSARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + + ++ + V++ A + + ++ G TN K Sbjct: 66 A-AIDTASDVFAIGSRPFSQRAVLKFANYTGATAMAGRFTPGAFTNQKQ----------- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + R+ P L+ V D + A+ EA Sbjct: 114 -----------------SCFRE-----------------PRLLVVSDPLSDHQAVMEASS 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGA-- 235 + +P++A+ +T+S VD VIP N+ S+ SIA+ +A I G + Sbjct: 140 VNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWWFLAREVRRIRGEDTRLQQWSVLP 199 Query: 236 -----DTKSAGETVVHSKEGMQLEEDSQSSESSVLD 266 + E V E +LE +++ + Sbjct: 200 DLFLYRDPNEEEQNVEDPEDARLEPVIPGADAEAAE 235 >gi|7525009|ref|NP_050107.1| ribosomal protein S2 [Dictyostelium discoideum] gi|74828572|sp|Q9XPI7|RT02_DICDI RecName: Full=Ribosomal protein S2, mitochondrial; Short=MRP-S2; Short=S2mt gi|4958912|dbj|BAA78089.1| ribosomal protein S2 [Dictyostelium discoideum] Length = 244 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 17/229 (7%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I + ++ G + WNP ++ +I+ E + HII + + ++ K L +I + + G Sbjct: 19 INYVYKTEFHLGESAWKWNPTLKSFIYKEISQIHIIRIPAFLLIIGKVLNLIREVMRFRG 78 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +++ VA + K Q + +K+ G +T + LR E Sbjct: 79 KVVIVANNLANGKVIERLVKTMRQPALLTKYYAGGLTR------KTENLRQYLEADKG-- 130 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 L + R K + L G++D+ P + ++D + K I E+ L IP + Sbjct: 131 --------LTNLKVRSKYIKQLIGLQDLERKPAYIVILDAIQGKFLINESAILGIPTIGC 182 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 DT N ++Y + GN S L+ A +G+ RQ + + A+ Sbjct: 183 GDTTINFPKLNYPLIGNFKSREKRGSVLLLIKHAMFEGM-RQEATIFAE 230 >gi|66524293|ref|XP_393965.2| PREDICTED: 40S ribosomal protein SA [Apis mellifera] Length = 310 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 82/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + ++L + G N N +ME+Y++ ++ + II+L T L A + I Sbjct: 8 LSLKEDDVTKMLAAYTHLGAENV--NFQMEQYVYKKKSDGVSIINLRHTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++ + V++ A+ + + ++ G TN Sbjct: 66 V-AIEHPSEVFVISCRQTGQRAVLKFAQHTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + I EA Sbjct: 112 --------------------------------IQSAFREPRLLIVTDPSTDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N S + L L+A + Sbjct: 140 VNIPVIAFCNTDSPLRFVDIAIPCNTKSLHCVGLMWWLLAREVLR 184 >gi|114633291|ref|XP_001139163.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 1 [Pan troglodytes] Length = 221 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 97/264 (36%), Gaps = 52/264 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEHVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+S VD IP N+ + S+ L ++A + R Y + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVL--RMRGTIYREHPWEV 197 Query: 240 AGET-VVHSKEGMQLEEDSQSSES 262 + E ++ EE + + ++ Sbjct: 198 MPDLYFYRDPEEIEKEEQAAAEKA 221 >gi|119607487|gb|EAW87081.1| hCG1984468, isoform CRA_b [Homo sapiens] Length = 295 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 96/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + EA Sbjct: 112 --------------------------------IQAAFQEPRLLVVTDPRADHQPFTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S V IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVHIAIPCNNKGAHSVGLMWWMLAWEVLCMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DFCFYRDPEEIEKEEQPAAEKAVTKEE--FQGERTAPAPE 237 >gi|297296764|ref|XP_002804884.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Macaca mulatta] gi|297296766|ref|XP_002804885.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Macaca mulatta] gi|297296768|ref|XP_002804886.1| PREDICTED: 40S ribosomal protein SA-like isoform 4 [Macaca mulatta] gi|297296770|ref|XP_001087280.2| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Macaca mulatta] gi|297296772|ref|XP_002804887.1| PREDICTED: 40S ribosomal protein SA-like isoform 5 [Macaca mulatta] Length = 295 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 99/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQF-GHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQV 58 + + + + + L +G G + +ME+YI+ + + +II+L +T L A + Sbjct: 8 LQMKEEDVLKFLAAGTHLDGTN---LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARA 64 Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 I + + +++++ V++ A + + ++ G TN Sbjct: 65 IV-AIENPADVSVISSRNTGQRAVLKFAAATEATPIAGRFTPGTFTNQ------------ 111 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 I+ P L+ V D + + EA Sbjct: 112 ---------------------------------IQAAFREPRLLVVTDPRADHQPLTEAS 138 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 + +P +A+ +T+S VD IP N+ + S+ L + A + + S Sbjct: 139 YVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMPAREVLR-MRGTISREHPWEV 197 Query: 239 SAGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + ++ + G+ + PE Sbjct: 198 MPDPYFYRDPEEIEKEEQAAAEKAVTKEEFQGELTSPAPE 237 >gi|312070710|ref|XP_003138272.1| laminin receptor 1 [Loa loa] gi|307766570|gb|EFO25804.1| laminin receptor 1 [Loa loa] Length = 294 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 51/233 (21%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 +LL G + +ME+Y++ R + HII L +T L + Sbjct: 17 KLLACQTHVG--AANCDFQMEQYVWKRRADGVHIIHLRKTWEKLLL-AARAIAAIDNPAD 73 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + V+ + A +++ A + + ++ G +TN Q ++ ++ Sbjct: 74 VCVVSARPYAQRALLKFAAHTGSTPIFGRFTPGCLTN-----QIQKQFKE---------- 118 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 P L+ V D + A+ EA + +P+++ Sbjct: 119 ------------------------------PRLLIVSDPRVDHQAVTEASYVGVPVISFC 148 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKS 239 +T+S +D IP N+ +SI L L+A I G + + D K Sbjct: 149 NTDSPLKFIDIAIPCNNKGVQSIGLMWWLLAREVLLIKGKMTRQTGFILDDKE 201 >gi|323133471|gb|ADX30746.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 1/107 (0%) Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKK-ERL 136 +D V AA ++ + VN KWLGGM+TNW T + + KLRDL+ KK + Sbjct: 1 FADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLHKLRDLKIKHKMGRLKQLKKRDVT 60 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 61 GLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|323133461|gb|ADX30741.1| small ribosomal protein S2 [Monotropa hypopitys] gi|323133467|gb|ADX30744.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 +D V AA ++ + VN KWLGGM+TNW T + + K RDL+ + + K++ Sbjct: 1 FADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLYKFRDLKIKQKMGRLKQLNKRDVT 60 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 61 RLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|213517417|gb|ACJ50123.1| ribosomal protein S2 [Chlamydomonas reinhardtii] Length = 910 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 15/158 (9%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTH--------------IIDLSQ 47 A + ++RQ+L+SG+ +G + N +M+ Y++ + T +I+L + Sbjct: 309 AFVRSSLRQMLKSGMHYGEKAIKCNARMKNYVWTRKKGTDTKVEARPLIKKGRNLINLLK 368 Query: 48 TVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNW 106 T L KAL ++ A+G LFV TK AS V AA S + VN++WLGGM+TNW Sbjct: 369 TRRCLTKALAQLTKYAAKGKTFLFVGTKKAASGLVARAALFSKKAFFVNTRWLGGMLTNW 428 Query: 107 KTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 KT+ +SI K+R + + + +K + R K Sbjct: 429 KTILKSISKIRPILKEKQMIIKDILEKRQTIKARLIQK 466 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 13/135 (9%) Query: 97 KWLGGMMTNW-KTVSQSIQKLRD------LEELLNKENQGFTKKERLNIERKRDKLKRAL 149 ++L +T +T ++K D ++ + +K+ +KK + ++K +L++ L Sbjct: 755 RYLPTPVTKIEQTARFLVKKFVDPKMKYPMDSIYDKKLSRQSKKVAASRKKKWQRLEKYL 814 Query: 150 DGIRDMGGLP------DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 GI +M + ++ ++ E A++E ++L I + +VDTN NP L D+ IP Sbjct: 815 GGISNMTKIKEKQIANNVAIIIGQQEEMNAVRECQKLGIKMFHIVDTNCNPGLADHFIPA 874 Query: 204 NDDSSRSIALFCDLV 218 NDD+ SI Sbjct: 875 NDDARNSIKFILGKF 889 >gi|218884669|ref|YP_002429051.1| 30S ribosomal protein S2 [Desulfurococcus kamchatkensis 1221n] gi|218766285|gb|ACL11684.1| 30S ribosomal protein S2P [Desulfurococcus kamchatkensis 1221n] Length = 215 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I + L +GV G + ME +++ R + +I+D+ + L+ A + ++ + Sbjct: 25 IEKYLSAGVHIG--THICTKFMEPFVYRVRSDGLYILDVRKIDDRLKIAGKFLAR--YQP 80 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I V+ + V + + ++L G TN Sbjct: 81 EKIAVVSVRQYGRKPVQKMCQYVGCKPFVGRFLPGTFTNPS------------------- 121 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 LK + PD++ + DT + A++EA IPIVA Sbjct: 122 ------------------LKIYFE--------PDVVVITDTRSDMQALKEAAETGIPIVA 155 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT++ D VD +IPGN+ +S+AL ++ + Sbjct: 156 LADTDNRVDYVDLIIPGNNKGRKSLALIYWILTRQILR 193 >gi|16603918|gb|AAL27205.1| ribosomal protein subunit 2 [Monotropa uniflora] gi|16603920|gb|AAL27206.1| ribosomal protein subunit 2 [Monotropa uniflora] Length = 121 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 3/121 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ +R + L + T +D V+ +A ++ + VN KWLGG++TNW T Sbjct: 1 FLSEACNLVFAAASREKQFLIIGTNKDIADLVLRSALKARCHYVNKKWLGGILTNWVTTE 60 Query: 111 QSIQKLRDLEELLNK---ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + + KLRDL+ ++ K++ + ++ L+ GI M LPD++ ++D Sbjct: 61 KQLNKLRDLKIEQKGVKLKSLLIPKRQSTKLRKQLVHLQTYFGGIIYMTRLPDIVIILDQ 120 Query: 168 N 168 Sbjct: 121 Q 121 >gi|108773056|ref|YP_635965.1| ribosomal protein S2 fragment a [Scenedesmus obliquus] gi|122225254|sp|Q1KVV9|RR2A_SCEOB RecName: Full=30S ribosomal protein S2, chloroplastic 1 gi|88696622|gb|ABD48248.1| ribosomal protein S2 fragment a [Scenedesmus obliquus] Length = 532 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN---------------------- 39 A+ + T++++++S + FG + N M +YI+ + Sbjct: 271 AMVKETVQKMIQSSMHFGEKAIRCNANMRKYIWYRKKGLGMYTNSKNTFVSIKETKKPMV 330 Query: 40 ---THIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSA-QYCVN 95 H++++ +T +AL+ ++ A+G LFV TK A+ V + A S + VN Sbjct: 331 KRGRHVLNVLKTQRCFAEALKQLAKYAAKGKTFLFVGTKKPAASLVAKTALLSNTSFFVN 390 Query: 96 SKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 ++WLGGM+TNWKT+ +SI ++R + + K Q +K R +K Sbjct: 391 TRWLGGMLTNWKTILKSISQIRPILKQKQKILQKILEKREKIQRRLFNK 439 >gi|146304887|ref|YP_001192203.1| 30S ribosomal protein S2 [Metallosphaera sedula DSM 5348] gi|172046961|sp|A4YIM7|RS2_METS5 RecName: Full=30S ribosomal protein S2P gi|145703137|gb|ABP96279.1| SSU ribosomal protein S2P [Metallosphaera sedula DSM 5348] Length = 225 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 91/238 (38%), Gaps = 52/238 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L +GV G MER+I+ R +++D+ + L+ A + +S + Sbjct: 33 LENYLSAGVHIGTHT--CTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFLSR--FQP 88 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL VA++ A V + A+ V + + GM+TN L D E Sbjct: 89 QSILAVASRPYAFTPVQKFAEVVGARAVVGRMVPGMLTNPY--------LEDFIE----- 135 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P+++ V D + AI+EA + IP+VA Sbjct: 136 --------------------------------PEVLLVSDPRTDTQAIKEAADMGIPVVA 163 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 DT++ D VD VIP N+ +S+AL +A + R+ AD E Sbjct: 164 FSDTDAKVDYVDLVIPSNNKGRKSLALLYWALARQIL--RERKEIAPDADIPVKVEEF 219 >gi|253795685|ref|YP_003038781.1| putative 30S ribosomal subunit protein S2 [Candidatus Hodgkinia cicadicola Dsem] gi|253739993|gb|ACT34328.1| putative 30S ribosomal subunit protein S2 [Candidatus Hodgkinia cicadicola Dsem] Length = 398 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 6/209 (2%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 LL SGV +G R K ++++ VP L+ AL ++ + VA GG++L Sbjct: 17 LLASGVYYGRRAPA--AKSALLALGSWGEFSVLNIGGAVPALELALGLMFEKVAHGGKVL 74 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 FV ++S + V E + Q V +K GG++TNW T ++++ L K + Sbjct: 75 FVCSRSVDPEVVGELLAGAGQ-YVMTKPTGGVLTNWLTFKGVGERVK---RELRKASASK 130 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 K+ ++ + L G+ P ++ V + ++EA L +P+V + D Sbjct: 131 NKRILKLCLKQASRAASLLAGVAKRATPPSMVVVFCEACDACVVKEANVLGVPVVGIADA 190 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 ++ +DYV+P + S + C L+A Sbjct: 191 TASVRGIDYVVPVSSSSKPADEFVCQLMA 219 >gi|323133465|gb|ADX30743.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERL 136 +D V AA ++ + VN KWLGGM+TNW T + + K RDL+ + + K++ Sbjct: 1 FADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKGLYKFRDLKIKQKMGRLKQLNKRDVT 60 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++RK L+ L GI+ M LPD++ ++D ++E +A+ E L IP Sbjct: 61 RLKRKLAHLQEYLGGIKYMTRLPDIVIILDQHKEYIALLECITLGIP 107 >gi|255562794|ref|XP_002522402.1| 30S ribosomal protein S2, putative [Ricinus communis] gi|223538287|gb|EEF39894.1| 30S ribosomal protein S2, putative [Ricinus communis] Length = 110 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 ++ ++ + L V+TK++A+D V AA R+ + VN KWLGG++TNW T +QK RD Sbjct: 1 MNREASKRKQFLIVSTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTKTRLQKFRD 60 Query: 119 -LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 E K + ++R+ L+ L GI+ M GLPD++ +VD Sbjct: 61 LRMEQKTGRLNRLPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQ 110 >gi|126465720|ref|YP_001040829.1| 30S ribosomal protein S2 [Staphylothermus marinus F1] gi|209573681|sp|A3DMR1|RS2_STAMF RecName: Full=30S ribosomal protein S2P gi|126014543|gb|ABN69921.1| SSU ribosomal protein S2P [Staphylothermus marinus F1] Length = 220 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 85/220 (38%), Gaps = 50/220 (22%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV G + ME +++ RN +I+D+ + ++ A + +S Sbjct: 26 IPLEKYLAAGVHIG--THICTKFMEPFVYRVRNDGLYILDVRKIDERIRIAAKFLSR--Y 81 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +I V+ ++ V++ +++ G TN L+ E Sbjct: 82 EPSKIAAVSVRTYGQKPVVKFCNYVGCKPFTGRFMPGTFTNPS--------LKWYFE--- 130 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ + D + A++EA + IPI Sbjct: 131 ----------------------------------PDIVLLTDPRADSQALKEAAEIGIPI 156 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 V++ DT++ + +D +IP N+ +S+AL L+A + Sbjct: 157 VSLADTDNRTEYIDLIIPANNKGRKSLALIYWLLARQILR 196 >gi|254583386|ref|XP_002497261.1| ZYRO0F01496p [Zygosaccharomyces rouxii] gi|269969664|sp|C5DX17|RSSA_ZYGRC RecName: Full=40S ribosomal protein S0 gi|238940154|emb|CAR28328.1| ZYRO0F01496p [Zygosaccharomyces rouxii] Length = 252 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + G RN + E Y+F R + +++D+ +T L Sbjct: 1 MSLPATFDLTTEDAQLLLAANTHLGARNVQVHQ--EPYVFKTRPDGVNVVDVGKTWEKLV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + I+ +++++ V++ + + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNPEDIVAISSRTFGQRAVLKFSAHTGATPIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLIIVTDPRSDAQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+EA + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLR 183 >gi|209735958|gb|ACI68848.1| 40S ribosomal protein SA [Salmo salar] gi|303660487|gb|ADM15997.1| 40S ribosomal protein SA [Salmo salar] Length = 317 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 105/296 (35%), Gaps = 68/296 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G + + +ME Y + + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNM-DFQMEHYTYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L +++ + I+R+H Sbjct: 140 VNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKE--GMQLEEDSQSSESSVLDGQEVAVVPEL 276 + + ++A E V +E G + ++ V D E VP + Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWTAPTADFAQPEVADWSEGVAVPSV 255 >gi|62955649|ref|NP_001017838.1| hypothetical protein LOC550536 [Danio rerio] gi|62205143|gb|AAH92777.1| Zgc:110181 [Danio rerio] gi|182891134|gb|AAI63951.1| Zgc:110181 protein [Danio rerio] Length = 295 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 99/286 (34%), Gaps = 65/286 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + I ++L + G N + +M +Y++ + HII+L +T L A + I Sbjct: 5 LALTEPDILKMLAAKTHIGSENS--DFQMLQYVYKRCIDGVHIINLKKTWEKLVLAARAI 62 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++T+ Q V++ +K + + ++ G TN Sbjct: 63 V-AIENPSEVFAISTRQQGQRAVLKYSKYTGATPIAGRFTPGAFTNQ------------- 108 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + +I EA Sbjct: 109 --------------------------------IQAAFREPRLLVVADPLADHQSIVEASY 136 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK- 238 + IP++A D +S VD IP N + S+ L + + R + + DT Sbjct: 137 VNIPVIAFCDVDSPLRYVDIAIPCNTKAPHSLGLMFWFLTREVL----RLRAMISRDTPW 192 Query: 239 ---------SAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 A E V KE +E + ++ A + E Sbjct: 193 EIMPDMFFYRAPEDV--DKEEQAKQEALAAMPVRPIEADYSAPIAE 236 >gi|229891590|sp|A2I3Z2|RSSA_MACHI RecName: Full=40S ribosomal protein SA gi|121543783|gb|ABM55561.1| putative ribosomal protein SA [Maconellicoccus hirsutus] Length = 308 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 77/218 (35%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I ++L + G N N +ME+YI+ R + +I +L +T L V Sbjct: 15 ITKMLSANTHLGAENT--NFQMEQYIYKRRSDGINIFNLRKTWEKLLL-AARAIAAVEHA 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I ++++ V++ A + + ++ G TN Sbjct: 72 AEIFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQ-------------------- 111 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 I+ P L+ V D +K I EA + IP++A Sbjct: 112 -------------------------IQAAFREPRLLVVTDPAEDKQPITEASYVNIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +T+S VD IP N S+ SI L L+A + Sbjct: 147 FCNTDSPLRYVDIAIPCNTKSAHSIGLMWWLLAREVLR 184 >gi|119872611|ref|YP_930618.1| 30S ribosomal protein S2 [Pyrobaculum islandicum DSM 4184] gi|209573677|sp|A1RTJ3|RS2_PYRIL RecName: Full=30S ribosomal protein S2P gi|119674019|gb|ABL88275.1| SSU ribosomal protein S2P [Pyrobaculum islandicum DSM 4184] Length = 207 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 60/245 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMER--YIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV+ G L N +E +I+ R + I D+ + L+ A + IS Sbjct: 13 LEKYLSAGVRLG--TRLSNKYLEERGFIYAVRPDGLRIFDIKKIDERLRIAAKFISR--Y 68 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + RIL T+ V K + +++ G +TN L + E+ Sbjct: 69 QPDRILVHTTRPYGFKPVQMFCKFVGCRALTGRFIPGTLTNPY--------LPNYTEI-- 118 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DL+FVVD + A+ EA ++ IPI Sbjct: 119 -----------------------------------DLLFVVDPKLDAQAVAEAAKMGIPI 143 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDT++ +D++IP N+ RS+AL ++A RQ + K + Sbjct: 144 IALVDTDTPHQYIDFMIPCNNKGRRSLALIFWILA--------RQVLRERGELKPDQDLP 195 Query: 245 VHSKE 249 V +E Sbjct: 196 VPPEE 200 >gi|124027420|ref|YP_001012740.1| 30S ribosomal protein S2 [Hyperthermus butylicus DSM 5456] gi|209573655|sp|A2BK84|RS2_HYPBU RecName: Full=30S ribosomal protein S2P gi|123978114|gb|ABM80395.1| 30S ribosomal protein S2P [Hyperthermus butylicus DSM 5456] Length = 216 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 88/235 (37%), Gaps = 52/235 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + + L +GV G + M ++++ R + +I+D+ +T L+ A + ++ Sbjct: 23 LERYLSAGVHIG--THICTAYMRKFVYRVRPDGLYILDIRKTDERLRVAAKFLAR--FEP 78 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I+ V+ + V + + + L G TN L E Sbjct: 79 SKIVAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPS--------LEWYVE----- 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A+ EA R+ IP+VA Sbjct: 126 --------------------------------PDVIVVTDPRADSQAVDEAARMGIPVVA 153 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADTKS 239 + DT++ + +D VIP N+ +S+AL ++ + G Q + ++ Sbjct: 154 LTDTDNRVENIDLVIPVNNKGRKSLALVYWILTREILREQGKIPQDQDLPEPPEA 208 >gi|327311476|ref|YP_004338373.1| 30S ribosomal protein S2 [Thermoproteus uzoniensis 768-20] gi|326947955|gb|AEA13061.1| 30S ribosomal protein S2 [Thermoproteus uzoniensis 768-20] Length = 210 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 56/243 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + + L SG++ G + + +I+ R + I D+ + L+ A + I+ Sbjct: 14 LERYLSSGIRLGTKMSNKYLEKRGFIYAVRPDGLRIFDIRKIDERLRIAAKFIAR--YSP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 RIL T+ + K + ++ G++TN L + E+ Sbjct: 72 DRILVHTTRPYGFKPIEMFCKYVGCKYIAGRFTPGILTNPY--------LPEYMEI---- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 DL+ VVD + A++EA + IP+VA Sbjct: 120 ---------------------------------DLLVVVDPKLDSQAVREAAIMGIPVVA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDT++ D +D +IP N+ RS+AL ++A RQ + K + V Sbjct: 147 LVDTDTPHDFIDLMIPCNNKGRRSLALIFWILA--------RQVLRERGELKPDQDLPVP 198 Query: 247 SKE 249 +E Sbjct: 199 PEE 201 >gi|305662639|ref|YP_003858927.1| SSU ribosomal protein S2P [Ignisphaera aggregans DSM 17230] gi|304377208|gb|ADM27047.1| SSU ribosomal protein S2P [Ignisphaera aggregans DSM 17230] Length = 209 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L++GV G MER++F R + +I+D+ +T L+ A + +S Sbjct: 19 LELYLQAGVHIGTHT--CTKHMERFVFRVRPDGLYILDVRKTDERLRVAGKFLSR--YEP 74 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I+ +AT+ V + A+ V +++ G +TN Sbjct: 75 TKIMVIATRQYGKQPVQKFAEFVGAKPVTGRFIPGTLTN--------------------- 113 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 KL+ + PD++ + D + ++EA + IP+VA Sbjct: 114 ----------------PKLEWYYE--------PDVIIITDPRIDSQPLREALMVGIPVVA 149 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 V T++ + VD IPGN+ +S+AL ++A + Sbjct: 150 FVSTDNKLEGVDLAIPGNNKGRKSLALLYWILARQVLR 187 >gi|223646786|gb|ACN10151.1| 40S ribosomal protein SA [Salmo salar] gi|223672641|gb|ACN12502.1| 40S ribosomal protein SA [Salmo salar] Length = 317 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 105/296 (35%), Gaps = 68/296 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G + + +ME Y + + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNM-DFQMEHYTYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L +++ + I+R+H Sbjct: 140 VNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKE--GMQLEEDSQSSESSVLDGQEVAVVPEL 276 + + ++A E V +E G + ++ V D E VP + Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWTAPTADFAQPEVADWSEGVAVPSV 255 >gi|213515322|ref|NP_001134397.1| 40S ribosomal protein SA [Salmo salar] gi|269969661|sp|B5DGB6|RSSA_SALSA RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40 gi|197632133|gb|ACH70790.1| ribosomal protein SA [Salmo salar] gi|209732994|gb|ACI67366.1| 40S ribosomal protein SA [Salmo salar] gi|209736164|gb|ACI68951.1| 40S ribosomal protein SA [Salmo salar] gi|209738578|gb|ACI70158.1| 40S ribosomal protein SA [Salmo salar] Length = 317 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 105/296 (35%), Gaps = 68/296 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G + + +ME Y + + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNM-DFQMEHYTYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L +++ + I+R+H Sbjct: 140 VNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKE--GMQLEEDSQSSESSVLDGQEVAVVPEL 276 + + ++A E V +E G + ++ V D E VP + Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWTAPTADFAQPEVADWSEGVAVPSV 255 >gi|297684609|ref|XP_002819921.1| PREDICTED: 40S ribosomal protein SA-like [Pongo abelii] Length = 295 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLATGTHLG-GTNL-DFQMEQYICKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + V+++S V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVVSSRSTGQRAVLKFAAATGATPIADRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFWEPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD I N+ + S+ L ++A + G Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIACNNKGAHSVGLMWWMLAREVLCMRGTISHEHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEETEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|119605356|gb|EAW84950.1| similar to Laminin receptor 1, isoform CRA_a [Homo sapiens] gi|119605357|gb|EAW84951.1| similar to Laminin receptor 1, isoform CRA_a [Homo sapiens] Length = 199 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 80/216 (37%), Gaps = 49/216 (22%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + L +G G L + +ME+YI+ + + +II+L +T L A + I + Sbjct: 17 KFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENPAD 73 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + +++++ V++ A + + ++ G TN Sbjct: 74 VSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ---------------------- 111 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 I+ P L+ V D + + EA + +P +A+ Sbjct: 112 -----------------------IQAAFWEPRLLVVTDPRADHQPLTEASYVNLPTIALC 148 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 +T+S VD IP N+ + S+ L ++A + Sbjct: 149 NTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR 184 >gi|56199516|gb|AAV84247.1| ribosomal protein 2A [Culicoides sonorensis] Length = 210 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 88/238 (36%), Gaps = 49/238 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +A + ++L + +G N N +ME+Y++ R + HII+L +T + A + I Sbjct: 8 LAFKEEDATKMLVATTHWGSENV--NFQMEQYVYKRRQDGVHIINLGRTWEKILLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + G + ++++S V++ A + + + G TN Sbjct: 66 V-AIEQPGEVYAISSRSFGQRAVLKYAHYTGATPIAGRXTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQPAFREPRLLIVTDPLTDHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 + IP++A +T+S VD IP N+ S SI L L+A + + H + Sbjct: 140 VNIPVIAFCNTDSPLKYVDIAIPCNNKSPYSIGLMWWLLAREVLRLRGKSHVNKNGEV 197 >gi|37778974|gb|AAP20147.1| 40S ribosomal protein Sa [Pagrus major] Length = 205 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +M++Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMDQYVYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP +A+ +T+S VD IP N+ S+ L ++A + Sbjct: 140 VNIPTIALCNTDSPLRYVDISIPCNNKGHHSVGLMWWMLAREVLR 184 >gi|154301336|ref|XP_001551081.1| hypothetical protein BC1G_10338 [Botryotinia fuckeliana B05.10] gi|150856239|gb|EDN31431.1| hypothetical protein BC1G_10338 [Botryotinia fuckeliana B05.10] Length = 289 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 55/109 (50%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ L+ S GH LWNP +RYI+ R HII L +T L++ +V+ Sbjct: 116 DVTLELLMASQSHLGHATQLWNPANQRYIYGIRQGVHIISLEETAAHLRRCAKVVEGVAY 175 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 GG ILFV T++ V++AA+ + + ++W+ G +TN + Sbjct: 176 HGGLILFVGTRAGQHSAVVKAAELAKGCHLFNRWVAGSITNGDQILAKC 224 >gi|109100789|ref|XP_001108640.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Macaca mulatta] gi|109100791|ref|XP_001108693.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Macaca mulatta] Length = 295 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 96/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 +++++ V++ A + + ++ G TN Sbjct: 66 V-ATENPADASVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + +A Sbjct: 112 --------------------------------IQAAFREPGLLVVTDPRADHQPLMKASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGA-- 235 + + +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLSTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLHMCGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAATEKAVTKEE--FQGEWTAPAPE 237 >gi|330834014|ref|YP_004408742.1| 30S ribosomal protein S2 [Metallosphaera cuprina Ar-4] gi|329566153|gb|AEB94258.1| 30S ribosomal protein S2 [Metallosphaera cuprina Ar-4] Length = 225 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 87/228 (38%), Gaps = 50/228 (21%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G MER+I+ R +++D+ + L+ A + +S + IL Sbjct: 37 LSAGVHIGTHT--CTRYMERFIYRVRPEGLYVLDVRKIDERLRIAAKFLSR--FQPQSIL 92 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA++ A V + A+ V + + GM+TN L D E Sbjct: 93 AVASRPYAFTPVQKFAEVVGARSVVGRMIPGMLTNPY--------LEDFIE--------- 135 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 P+++ V D + AI+EA + IP+VA DT Sbjct: 136 ----------------------------PEVLLVSDPRTDVQAIKEAADMGIPVVAFSDT 167 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 ++ D VD +IP N+ +S+AL +A + + K Sbjct: 168 DAKVDYVDLIIPSNNKGRKSLALLYWALARQVLRERKEISADGNIPVK 215 >gi|73949345|ref|XP_848985.1| PREDICTED: similar to laminin receptor 1 (ribosomal protein SA) isoform 1 [Canis familiaris] gi|73949347|ref|XP_857662.1| PREDICTED: similar to laminin receptor 1 (ribosomal protein SA) isoform 3 [Canis familiaris] Length = 286 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 94/272 (34%), Gaps = 54/272 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L + G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAETHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCN-KGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 198 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 D + KE E + + E +G Sbjct: 199 DLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEG 230 >gi|40889982|pdb|1VI6|A Chain A, Crystal Structure Of Ribosomal Protein S2p gi|40889983|pdb|1VI6|B Chain B, Crystal Structure Of Ribosomal Protein S2p gi|40889984|pdb|1VI6|C Chain C, Crystal Structure Of Ribosomal Protein S2p gi|40889985|pdb|1VI6|D Chain D, Crystal Structure Of Ribosomal Protein S2p Length = 208 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 50/232 (21%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G + + M+++IF R + +++D+ + ++ A + +S +IL Sbjct: 17 LAAGVHIGTQIKTGD--MKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLSR--YEPSKIL 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA + A V +K + +++ G +TN Sbjct: 73 LVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTN------------------------- 107 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 L+ R+ P+++FV D +K A+ EA + IP+VA+ D+ Sbjct: 108 ---PMLSEYRE-----------------PEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 N++ VD VIP N+ R++A+ L+A + +Y D ++ E Sbjct: 148 NNSSADVDLVIPTNNKGRRALAIVYWLLAREIAKIRGQDFTYSIEDFEAELE 199 >gi|16603892|gb|AAL27194.1| ribosomal protein subunit 2 [Pleuricospora fimbriolata] gi|16603894|gb|AAL27195.1| ribosomal protein subunit 2 [Pleuricospora fimbriolata] Length = 116 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A +I D +RG ++L V TK+ +D V AA+R+ + VN KWLGGM+TNW T Sbjct: 1 FLSEACDLIFDAASRGDQLLIVGTKNIVADFVARAARRARCHYVNKKWLGGMLTNWSTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + ++K RDL L K +R+ L+ GI+ M GLPD++ ++D Sbjct: 61 KRLRKFRDLRMELKMGRLKRIPKN-TRFKRQLAHLQAYFGGIQYMRGLPDIVIILDQ 116 >gi|322797859|gb|EFZ19764.1| hypothetical protein SINV_14378 [Solenopsis invicta] Length = 262 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 87/261 (33%), Gaps = 72/261 (27%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER----------------------- 37 +AL + + ++L +G G N N +ME+Y++ +R Sbjct: 8 LALKEDDVTKMLAAGTHLGAENV--NFQMEQYVYKKRVDGKKRKLNQDESIYIYEKWTLV 65 Query: 38 --------------NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 ++I+L T L A + I + + ++ + V+ Sbjct: 66 YITIFTFLYFTILGAGVNVINLRHTWEKLLLAARAIV-AIEHPSEVFVISCRHSGQRAVL 124 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRD 143 + A + + ++ G TN + + +L +E Sbjct: 125 KFAAHTGATPIAGRFTPGAFTNQIQIKVMKHFIPELASAAFRE----------------- 167 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 P L+ V D + + I EA + IP++A +T+S VD IP Sbjct: 168 ---------------PRLLIVTDPSTDHQPITEASYVNIPVIAFCNTDSPLRFVDIAIPC 212 Query: 204 NDDSSRSIALFCDLVASAAID 224 N S ++ L L+A + Sbjct: 213 NTKSLHTVGLMWWLLAREVLR 233 >gi|325846780|ref|ZP_08169695.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481538|gb|EGC84579.1| 30S ribosomal protein S2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 104 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 53/71 (74%) Query: 155 MGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 M LPD +FVVD + E++A+ EA+ L IP++++VDTN +PD+VD IPGNDD+ R++ L Sbjct: 1 MEELPDALFVVDPSNEQIAVHEAKILGIPVISIVDTNCDPDVVDIAIPGNDDAIRAVKLI 60 Query: 215 CDLVASAAIDG 225 ++A A I+G Sbjct: 61 TSVMADAVIEG 71 >gi|114602574|ref|XP_001158457.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 2 [Pan troglodytes] gi|114602576|ref|XP_001158521.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 3 [Pan troglodytes] gi|114602578|ref|XP_001158403.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 1 [Pan troglodytes] Length = 262 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 53/252 (21%) Query: 29 MERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAK 87 ME+YI+ + + +II+L +T L A + I + + +++++ V++ A Sbjct: 1 MEQYIYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENPADVSVISSRNTGQRAVLKFAA 59 Query: 88 RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKR 147 + + ++ G TN Sbjct: 60 ATGATPIAGRFTPGTFTNQ----------------------------------------- 78 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N+ Sbjct: 79 ----IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKG 134 Query: 208 SRSIALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESS 263 + S+ L ++A + G + D + KE E + + E Sbjct: 135 AHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE- 193 Query: 264 VLDGQEVAVVPE 275 G+ A PE Sbjct: 194 -FQGEWTAPAPE 204 >gi|156848330|ref|XP_001647047.1| hypothetical protein Kpol_1050p46 [Vanderwaltozyma polyspora DSM 70294] gi|229891572|sp|A7TEU3|RSSA1_VANPO RecName: Full=40S ribosomal protein S0-A gi|156117730|gb|EDO19189.1| hypothetical protein Kpol_1050p46 [Vanderwaltozyma polyspora DSM 70294] Length = 252 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + G RN + E Y+F R + ++I++ +T + Sbjct: 1 MSLPATFDLTPEDAQLLLAANTHLGARNVQVHQ--EPYVFNTRPDGVNVINVGKTWEKIV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + + +++++ V++ + + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLIIVTDPRSDFQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+EA + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLR 183 >gi|156845807|ref|XP_001645793.1| hypothetical protein Kpol_1010p51 [Vanderwaltozyma polyspora DSM 70294] gi|229891575|sp|A7TIJ7|RSSA2_VANPO RecName: Full=40S ribosomal protein S0-B gi|156116461|gb|EDO17935.1| hypothetical protein Kpol_1010p51 [Vanderwaltozyma polyspora DSM 70294] Length = 251 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 55/231 (23%) Query: 1 MALP---QFTIRQ---LLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQ 53 M+LP T LL + G RN + E Y+F R + ++I++ +T + Sbjct: 1 MSLPATFDLTPEDAQLLLAANTHLGARNVQVHQ--EPYVFNTRPDGVNVINVGKTWEKIV 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A ++I+ + + +++++ V++ + + + ++ G TN+ T Sbjct: 59 LAARIIA-AIPNPEDVCAISSRTYGQRAVLKFSAHTGATPIAGRFTPGSFTNYIT----- 112 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + ++ P L+ V D + A Sbjct: 113 RSFKE----------------------------------------PRLIIVTDPRSDFQA 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 I+EA + IP++A+ D +S + VD IP N+ SI L L+A + Sbjct: 133 IKEASYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLVWYLLAREVLR 183 >gi|327195238|ref|YP_004339020.1| ribosomal protein S2 [Coccomyxa sp. C-169] gi|325070734|gb|ADY75462.1| ribosomal protein S2 [Coccomyxa sp. C-169] Length = 282 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 35/242 (14%) Query: 6 FTIRQLLESGVQFGHR------NFLWNPKMERYIFCERNNTHIID----LSQTVPMLQKA 55 F +++L++SG GHR + + P M + ER + + L QT L A Sbjct: 24 FWLKRLIQSGGHVGHRPLNLSLSRVRYPAMSNSLIGERGQGAVTNASLTLQQTAKGLYLA 83 Query: 56 LQVISDTVARGGRILFVATKSQASDC--VMEAAKR---SAQYCVNSKWLGGMMTNWKTVS 110 V+ + G IL V T+ + S ++E+ KR S+ ++W+GG +TNW + S Sbjct: 84 ASVLR----QRGHILVVDTRREISPTNGLIESCKREISSSLSFSGNRWVGGSLTNWGSTS 139 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA-----LDGIR---DMGGLPDLM 162 + I + ++ + F K R++ R + L G R + PDL+ Sbjct: 140 KMISRF----AQISSRFEAFLKANRIHSPRYEKTKQAYPGFLMLKGGRLQLRLTRQPDLL 195 Query: 163 FVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDD----SSRSIALFCDLV 218 F+++ N + I+EAR L+IP+VA+VD+N+ V IP N + S++ + + DL Sbjct: 196 FIINPNENRHVIEEARMLKIPVVALVDSNTQLSHVTVPIPVNPNPTLWSNQIVRILIDLA 255 Query: 219 AS 220 S Sbjct: 256 TS 257 >gi|16603916|gb|AAL27204.1| ribosomal protein subunit 2 [Monotropa uniflora] Length = 121 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 3/121 (2%) Query: 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A ++ +R + L + T +D V+ +A ++ + VN KWLGG++TNW T Sbjct: 1 FLSEACNLVFAAASREKQFLIIGTNKDIADLVLRSALKARCHYVNKKWLGGILTNWVTTE 60 Query: 111 QSIQKLRDLEELLNKENQGFT---KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDT 167 + + KLRDL+ K++ + ++ L+ GI M LPD++ ++D Sbjct: 61 KQLNKLRDLKIEQKGVKLKSLLIQKRQSTKLRKQLVHLQTYFGGIIYMTRLPDIVIILDQ 120 Query: 168 N 168 Sbjct: 121 Q 121 >gi|167395276|ref|XP_001741304.1| 40S ribosomal protein SA [Entamoeba dispar SAW760] gi|165894201|gb|EDR22263.1| 40S ribosomal protein SA, putative [Entamoeba dispar SAW760] Length = 254 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 98/275 (35%), Gaps = 61/275 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNT-HIIDLSQTVPMLQKALQVISDTVAR- 65 I+ ++ V G N ME YI+ NN I +L +T L A +VI+ Sbjct: 20 IKMMVACRVHIG--ATNLNFAMEEYIYERGNNNECIFNLMKTWEKLSLAARVIAGISNET 77 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ VA + A ++ K + V ++ G TN Q +K + Sbjct: 78 PSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTN-----QIQKKFME------- 125 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + + A++E+ + +P + Sbjct: 126 ---------------------------------PRLIIVSDPSVDHQALRESGYINVPTI 152 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-------- 235 A +++++ VD IP N+ S SI L ++ + G + Sbjct: 153 AFCNSDNSLKNVDIAIPCNNRSRLSIGLMWWMLTREILRYQGKLARDEKWDVMVDLFLHR 212 Query: 236 --DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 D K + ++ ++E+ +++++V + Sbjct: 213 ELDAKKDAPVIAGEEKVAKVEDKKAANDATVASTE 247 >gi|54261161|dbj|BAD61010.1| ribosomal protein S2 [Hordeum vulgare subsp. vulgare] Length = 562 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 86/236 (36%), Gaps = 47/236 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + K+ YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRRVADHHFKV--YIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQA-SDCVMEAAKRSAQY--------CVNSKW-LGGMMTNWKTVS 110 + + GR F+ T + E A Y +S+W +G +TN Sbjct: 59 SPIRQKGRSFFLKTNHLFIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTNS---- 114 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 + + K K + PD + +++ +R+ Sbjct: 115 -----------------------FANKKKFRSRKKKINFG----LNQQPDCVVILNADRK 147 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLVASAAI 223 I EA R +IPI ++VD+ + + Y IP ND + + LF + I Sbjct: 148 SSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPANDP-IQFVYLFRHSIMKTVI 202 >gi|324522554|gb|ADY48079.1| 40S ribosomal protein SA [Ascaris suum] Length = 190 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 79/223 (35%), Gaps = 49/223 (21%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 L + + +LL G + +ME+Y++ R + THII L +T L Sbjct: 9 TLKEEDVMKLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKLLL-AARAV 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + V+ + A +++ A + + ++ G +TN Sbjct: 66 AAIENPADVCVVSARPYAQRALLKFAAHTGATPIFGRFTPGCLTNQ-------------- 111 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I+ P L+ V D + A+ EA + Sbjct: 112 -------------------------------IQKSFKEPRLLIVSDPRVDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +P+++ +T+S VD IP N+ +SI L ++A + Sbjct: 141 GVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWMLAREVL 183 >gi|170059457|ref|XP_001865372.1| 40S ribosomal protein SA [Culex quinquefasciatus] gi|167878238|gb|EDS41621.1| 40S ribosomal protein SA [Culex quinquefasciatus] Length = 282 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 92/275 (33%), Gaps = 59/275 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + ++L + G + N +ME Y+F R + HII+L +T L A + I Sbjct: 8 LALKDDDVNKMLAATTHVG--STSVNFQMESYVFKRRPDGVHIINLGRTWEKLLLAARCI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + G V++ A + + ++ G TN Sbjct: 66 ASIEYPGE---------FGQRAVLKFAHYTEATPIAGRFTPGAFTNQ------------- 103 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 104 --------------------------------IQPAFREPRLLIVTDPLTDHQPVTEASY 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADT 237 + IP++A +T+S VD IP N S SI L L+A + G + D Sbjct: 132 VNIPVIAFCNTDSPLKFVDIAIPCNTKSPHSIGLMWWLLAREVLKLRGKISDKWELKPDL 191 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAV 272 + KE L E + +++ D AV Sbjct: 192 FFYRDPEEQEKEQAALLEAAPAAKEMYTDEPIPAV 226 >gi|323650220|gb|ADX97196.1| 40S ribosomal protein SA [Perca flavescens] Length = 245 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 103/279 (36%), Gaps = 67/279 (24%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + ++E+Y++ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQVEQYVYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + IP +A+ +T+S VD IP N+ S+ L ++A + I+R+H Sbjct: 140 VNIPTIALCNTDSPLGYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 231 --------SYMGADTKSAGETVVHSKEGMQLEEDSQSSE 261 + + ++A E V KE Q E + ++E Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAV-GKEEFQGEWSAPAAE 237 >gi|260801725|ref|XP_002595746.1| hypothetical protein BRAFLDRAFT_200833 [Branchiostoma floridae] gi|229280993|gb|EEN51758.1| hypothetical protein BRAFLDRAFT_200833 [Branchiostoma floridae] Length = 299 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + + L G + +ME+Y+F + + HII+L +T L Sbjct: 8 LALKEEDVTKFLACATHLG--ASNVDFQMEQYVFKRKADGVHIINLKKTWEKLLL-AARA 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++ K +++ A + + ++ G TN Sbjct: 65 VAAIENPADVAIISCKPYGQRAILKFAAHTGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V+D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVLDPRMDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N+ S+ L ++A + Sbjct: 140 VNIPVIAFCNTDSPLRYVDIAIPCNNKGVHSVGLMVWMLAREILR 184 >gi|297266759|ref|XP_002799428.1| PREDICTED: 40S ribosomal protein SA-like [Macaca mulatta] Length = 286 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 97/278 (34%), Gaps = 55/278 (19%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61 + + + + L + G L + +ME+YI+ + + +II+L +T L ++ I Sbjct: 1 MKEEDVLKFLAAETHLG-GTSL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLVVRAIV- 57 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 V + +++++ V++ A + V ++ G TN Sbjct: 58 AVENPADVSVMSSRNTDQRAVLKFAAATGATLVAGRFTPGTFTNQ--------------- 102 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 I+ P L+ V D + + EA + Sbjct: 103 ------------------------------IQAAFREPQLLMVTDPRADHQPLMEASCVN 132 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGA--DT 237 +P +A+ T+S VD V+P N+ + S+ L ++A + G + D Sbjct: 133 LPTIALCHTDSPLRYVDIVVPCNNRGAHSVGLMWWMLAREVLRMCGTNSRERPWEVMPDL 192 Query: 238 KSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + KE E + + E G+ A PE Sbjct: 193 YFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 228 >gi|146674809|gb|ABQ42346.1| laminin receptor precursor [Ovis aries] Length = 227 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 91/264 (34%), Gaps = 55/264 (20%) Query: 17 QFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 G L + +ME+YI+ + + +II+L +T L A + I + + ++++ Sbjct: 1 HLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENPADVSVISSR 57 Query: 76 SQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKER 135 + V++ A + + ++ G TN Sbjct: 58 NTGQRAVLKFAAATGATPIAGRFTPGTFTNQ----------------------------- 88 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 I+ P L+ V D + + EA + +P +A+ +T+S Sbjct: 89 ----------------IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLR 132 Query: 196 LVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGM 251 VD IP N+ + S+ L ++A + G + D + KE Sbjct: 133 YVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ 192 Query: 252 QLEEDSQSSESSVLDGQEVAVVPE 275 E + + E G+ A PE Sbjct: 193 AAAEKAVTKEE--FQGEWTAPAPE 214 >gi|332796341|ref|YP_004457841.1| 30S ribosomal protein S2 [Acidianus hospitalis W1] gi|332694076|gb|AEE93543.1| ribosomal protein S2 [Acidianus hospitalis W1] Length = 226 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 52/238 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L +GV G ME++I+ R +++D+ + L+ A + +S G Sbjct: 34 LENYLSAGVHIGTHT--CTKYMEKFIYRVRPEGLYVLDVRKIDERLRIAAKFLSRFTPSG 91 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL VA++ A V + A+ + + + G +TN + + + Sbjct: 92 --ILAVASRPYAFTPVQKFAEVVGGRAITGRLVPGTLTNAY-----LDRFIE-------- 136 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P+++ V D + AI+EA + IP+VA Sbjct: 137 --------------------------------PEVLLVSDPRTDTQAIKEAADMGIPVVA 164 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 DT++ + VD VIP N+ +S+AL L+A + R+ M AD E Sbjct: 165 FADTDAKIEYVDLVIPANNKGRKSLALLYWLLARQIL--RERKQIPMDADIPVKVEEF 220 >gi|126179753|ref|YP_001047718.1| 30S ribosomal protein S2 [Methanoculleus marisnigri JR1] gi|209573666|sp|A3CWI6|RS2_METMJ RecName: Full=30S ribosomal protein S2P gi|125862547|gb|ABN57736.1| SSU ribosomal protein S2P [Methanoculleus marisnigri JR1] Length = 205 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 47/218 (21%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDT 62 P + + L +GV G + + M ++I+ R + +I+D+ T ++ A + +S Sbjct: 13 PLLPVEEYLAAGVHIGTQQKSKD--MMKFIYRVRGDGLYILDIQATDERIKTAAKFLSQ- 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +IL V ++ + A V +++ GM+TN Q+L L + Sbjct: 70 -YEPSKILVVTSRQYGQYPAKKFADAIGGMAVVGRFIPGMLTN--------QRLHGLNKY 120 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + PD++ V D + I EA ++ I Sbjct: 121 IE----------------------------------PDVVVVTDPIGDSQTIAEAVQVGI 146 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 PIVA+ DTN+ VD VIP N+ +++++ L+ Sbjct: 147 PIVALCDTNNMTKYVDVVIPTNNKGRKALSVIYYLLTK 184 >gi|149729638|ref|XP_001489636.1| PREDICTED: similar to ribosomal protein SA [Equus caballus] Length = 295 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 95/280 (33%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + TN Sbjct: 66 V-AIENPADVSVISSRNTGQQAVLKFAAATGATPIAGHFTPETFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ + +S VD P N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNIDSPLRYVDIATPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|18312202|ref|NP_558869.1| 30S ribosomal protein S2 [Pyrobaculum aerophilum str. IM2] gi|20978668|sp|Q8ZYE2|RS2_PYRAE RecName: Full=30S ribosomal protein S2P gi|18159640|gb|AAL63051.1| ribosomal protein S2 [Pyrobaculum aerophilum str. IM2] Length = 208 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 60/245 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMER--YIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV+ G L N +E +IF R + I D+ + L+ A + I+ Sbjct: 13 LEKYLSAGVRLG--TRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAAKFIAR--Y 68 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R R+L T+ V K + +++ G +TN L +E+ Sbjct: 69 RPERVLVHTTRPYGFKPVQMFCKFVGCKALTGRFIPGTLTNPN--------LPHYQEV-- 118 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DL+FVVD + A+ EA ++ IP+ Sbjct: 119 -----------------------------------DLLFVVDPKLDAQAVAEAAKMGIPV 143 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDT++ +D++IP N+ +S+AL ++A RQ + K + Sbjct: 144 IALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILA--------RQVLRERGELKPDQDLP 195 Query: 245 VHSKE 249 V +E Sbjct: 196 VPPEE 200 >gi|242398340|ref|YP_002993764.1| 30S ribosomal protein S2P [Thermococcus sibiricus MM 739] gi|242264733|gb|ACS89415.1| 30S ribosomal protein S2P [Thermococcus sibiricus MM 739] Length = 204 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+R+I+ R + +++D+ +T L+ A + ++ Sbjct: 11 LDQYLAAGVHIGTQQKTKD--MKRFIYRVRQDGLYVLDVRKTDERLRAAGKFLAK--FDP 66 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 RIL V+ + V + + + + ++L G MTN Sbjct: 67 DRILAVSVRLYGQKPVKKFGEITGARSIPGRFLPGSMTNP-------------------- 106 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L R PD++ V D + A++EA + IP+VA Sbjct: 107 ------------------LVRNFF-------EPDVLVVTDPRADHQAMKEAIDIGIPVVA 141 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDT + VD IP N+ +S+AL ++ + Sbjct: 142 LVDTENLLSYVDLAIPTNNKGRKSLALIYWILTREVL 178 >gi|20095014|ref|NP_614861.1| 30S ribosomal protein S2 [Methanopyrus kandleri AV19] gi|23822121|sp|Q8TV23|RS2_METKA RecName: Full=30S ribosomal protein S2P gi|19888277|gb|AAM02791.1| Ribosomal protein S2 [Methanopyrus kandleri AV19] Length = 203 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 90/225 (40%), Gaps = 50/225 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L +GV G + + ME +I+ R + H+ID+ +T ++ A +S + Sbjct: 11 LNDYLAAGVHIGTQQKTKD--MEPFIYRTRADGLHVIDVRKTDERIRIAANFLS--MYNT 66 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + A+ + + +++ G +TN E Sbjct: 67 DEILVVSRRYYGQKPVSKFAEATGTTAIPGRFVPGTLTNP-------------------E 107 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 G+ + P+++ + D + A+ EA+ + IPIVA Sbjct: 108 YDGYLE--------------------------PEVIVLTDPRADFQALVEAQSVGIPIVA 141 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 + DT++ VD IP N+ +++AL L+A + + R Sbjct: 142 LCDTDNFTGNVDLAIPTNNKGRKALALVYWLLARELLKKLGRLEE 186 >gi|323133459|gb|ADX30740.1| small ribosomal protein S2 [Monotropa hypopitys] gi|323133463|gb|ADX30742.1| small ribosomal protein S2 [Monotropa hypopitys] Length = 107 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 1/107 (0%) Query: 78 ASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKK-ERL 136 +D V AA ++ + VN KWLGGM+TNW T + + KLRDL+ KK + Sbjct: 1 FADLVSRAAIKARCHYVNKKWLGGMLTNWSTTKKELHKLRDLKIKHKMGRLKQLKKRDVT 60 Query: 137 NIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 ++R+ L+ L GI+ M LPD++ ++D ++E +++ E L IP Sbjct: 61 GLKRQLAHLQEYLGGIKYMTRLPDIVIILDQHKEYISLLECITLGIP 107 >gi|297667548|ref|XP_002812039.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] gi|297667550|ref|XP_002812040.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] gi|297667552|ref|XP_002812041.1| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Pongo abelii] Length = 296 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 85/224 (37%), Gaps = 49/224 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + ++ +++++ V++ A + + + G TN Sbjct: 66 V-AIENPADVIVISSRNTGQRAVLKFAAATGATPIAGHFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFQEPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + +P +A+ +T+S VD VIP ++ + S+ L ++A + Sbjct: 140 VNLPTIALCNTDSPLRFVDIVIPCSNKGAHSVGLMWWMLAREVL 183 >gi|218462273|ref|ZP_03502364.1| 30S ribosomal protein S2 [Rhizobium etli Kim 5] Length = 82 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 44/81 (54%), Positives = 59/81 (72%) Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 I EA+RL IP+VA++D+N +PDL+DY IPGNDD+SR+IAL+C+L++ AAIDGIARQ S Sbjct: 1 IDEAKRLGIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSS 60 Query: 234 GADTKSAGETVVHSKEGMQLE 254 G D ++ E V E Sbjct: 61 GRDLGASSEVPVEPALEEAAE 81 >gi|67462433|ref|XP_647879.1| 40S ribosomal protein SA [Entamoeba histolytica HM-1:IMSS] gi|67483019|ref|XP_656803.1| 40S ribosomal protein SA [Entamoeba histolytica HM-1:IMSS] gi|56463491|gb|EAL42492.1| 40S ribosomal protein SA, putative [Entamoeba histolytica HM-1:IMSS] gi|56474025|gb|EAL51417.1| 40S ribosomal protein SA, putative [Entamoeba histolytica HM-1:IMSS] Length = 254 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 98/275 (35%), Gaps = 61/275 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNT-HIIDLSQTVPMLQKALQVISDTVAR- 65 I+ ++ V G N ME Y++ NN I +L +T L A +VI+ Sbjct: 20 IKMMVACRVHIG--ATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVIAGISNET 77 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ VA + A ++ K + V ++ G TN Q +K + Sbjct: 78 PSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTN-----QIQKKFME------- 125 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + + A++E+ + +P + Sbjct: 126 ---------------------------------PRLIIVSDPSVDHQALRESGYINVPTI 152 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-------- 235 A +++++ VD IP N+ S SI L ++ + G + Sbjct: 153 AFCNSDNSLKNVDIAIPCNNRSRLSIGLMWWMLTREILRYQGKLARDEKWDVMVDLFLHR 212 Query: 236 --DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 D K + ++ ++E+ +S+++V + Sbjct: 213 ELDAKKDAPVIAGEEKVAKVEDKKAASDATVASTE 247 >gi|188572456|gb|ACD65134.1| putative 40S ribosomal protein RPSA [Phoronis muelleri] Length = 217 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + + L G G + +ME Y++ + + II+L +T + Sbjct: 8 LALKEEDVTKFLACGTHLG--ANNVDFQMESYVYKRKPDGVFIINLRKTWEKVLL-AARA 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++ + V++ A + + ++ G TN Sbjct: 65 IAAIENPADVCVISARPYGMRAVLKFAAATGASPIAGRFTPGTFTNR------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D ++ I EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRQDHQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ SI L+A + Sbjct: 140 VNIPVIALCNTDSPLRYVDIAIPCNNKGVHSIGFMWYLLAREVLR 184 >gi|18978012|ref|NP_579369.1| 30S ribosomal protein S2 [Pyrococcus furiosus DSM 3638] gi|23822122|sp|Q8U0F0|RS2_PYRFU RecName: Full=30S ribosomal protein S2P gi|18893793|gb|AAL81764.1| SSU ribosomal protein S2P [Pyrococcus furiosus DSM 3638] Length = 202 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 93/243 (38%), Gaps = 52/243 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 9 LDQYLAAGVHIGTQQKTKD--MKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAK--FEP 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN ++ + Sbjct: 65 QSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPA-----VKNFFE-------- 111 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A++EA + IPIVA Sbjct: 112 --------------------------------PDVLIVTDPRADHQAMREAVEIGIPIVA 139 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADTKSAGETV 244 +VDT + VD IP N+ +++AL ++A + G + + + Sbjct: 140 LVDTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIQSREDFKIPVEEFEMKI 199 Query: 245 VHS 247 V Sbjct: 200 VRR 202 >gi|332157857|ref|YP_004423136.1| 30S ribosomal protein S2 [Pyrococcus sp. NA2] gi|331033320|gb|AEC51132.1| 30S ribosomal protein S2 [Pyrococcus sp. NA2] Length = 205 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 12 LEQYLAAGVHIGTQQKTKD--MKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAK--FDP 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN ++ + Sbjct: 68 QSILAVSVRLYGQKPVKKFGEVTGAKAIPGRFLPGTMTNPA-----VKNFFE-------- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ + D + A++EA + IPIVA Sbjct: 115 --------------------------------PDVIIITDPRADHQAMKEAIEIGIPIVA 142 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDT + VD IP N+ +++AL ++A + Sbjct: 143 LVDTENLLSYVDLAIPTNNKGRKALALIYWILAREIL 179 >gi|2547036|emb|CAA74226.1| ribosomal protein S2 [Triticum aestivum] Length = 362 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 85/236 (36%), Gaps = 47/236 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + K+ YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRRVADHHFKV--YIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQA-SDCVMEAAKRSAQY--------CVNSKW-LGGMMTNWKTVS 110 + GR F+ T + E A Y +S+W +G +TN Sbjct: 59 SPSRQKGRSFFLKTNHLFIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTNS---- 114 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 + + K K + PD + +++ +R+ Sbjct: 115 -----------------------FANKKKFRSRKKKINFG----LNQQPDCVVILNADRK 147 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLVASAAI 223 I EA R +IPI ++VD+ + + Y IP ND + + LF + I Sbjct: 148 SSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPANDP-IQFVYLFRHSIMKTVI 202 >gi|221142490|ref|ZP_03566983.1| 30S ribosomal protein S2 [Staphylococcus aureus subsp. aureus str. JKD6009] Length = 95 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 5/100 (5%) Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 +FVVD +E+ AI EAR+L IPIV +VDTN +PD +DYVIP NDD+ R++ L +A A Sbjct: 1 LFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADA 60 Query: 222 AIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSE 261 ++G ++ + A E + E + EE + E Sbjct: 61 ILEGQQGV-----SNEEVAAEQNIDLDEKEKSEETEATEE 95 >gi|296215650|ref|XP_002754216.1| PREDICTED: 40S ribosomal protein SA-like [Callithrix jacchus] Length = 295 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 97/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G N + +ME+ I+ E + +II+L +T L A + I Sbjct: 8 LKMKEEDVLKFLAAGTHLGDTN--LDFQMEQCIYKRESDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + +++ + V+ A + + ++ G TN Sbjct: 66 V-AIENPADVSVIFSRNTSQRAVLMFAAATGTTPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAYWEPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVSHMRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYRDPEEIEKEDQAAAEKAVTKEE--FQGEWTAPAPE 237 >gi|255565784|ref|XP_002523881.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] gi|223536811|gb|EEF38450.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis] Length = 360 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +R + L V TK++A+D V AA R+ + VN KWLG ++TNW T +Q +DL Sbjct: 256 ASRRKQFLIVGTKNKAADLVARAAIRARCHYVNKKWLGSILTNWSTTENRLQNFKDLRME 315 Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 K + ++R+ L+ L GI+ M GLPD++ +VD Sbjct: 316 QKTCRLNRLPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVD 360 >gi|126458655|ref|YP_001054933.1| 30S ribosomal protein S2 [Pyrobaculum calidifontis JCM 11548] gi|209573676|sp|A3MS50|RS2_PYRCJ RecName: Full=30S ribosomal protein S2P gi|126248376|gb|ABO07467.1| SSU ribosomal protein S2P [Pyrobaculum calidifontis JCM 11548] Length = 208 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 60/245 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMER--YIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV+ G L N +E +I+ R + I D+ + L+ A ++I+ Sbjct: 13 LEKYLSAGVRLG--TRLSNKYLEERGFIYAVRPDGLRIFDIKKIDERLRIAAKLIAR--Y 68 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R+L T+ V K + +++ GM+TN Sbjct: 69 PPDRVLVHTTRPYGFKPVQMFCKFVGCKALTGRFIPGMLTN------------------- 109 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 L L+ DL+FVVD + A+ EA ++ IP+ Sbjct: 110 ------------------PNLSNYLE--------VDLLFVVDPRLDSQAVAEAAKMGIPV 143 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDT++ +D++IP N+ +S+AL ++A RQ + K + Sbjct: 144 VALVDTDTPHQYIDFMIPCNNKGRKSLALIFWVLA--------RQVLRERGELKPDQDLP 195 Query: 245 VHSKE 249 V +E Sbjct: 196 VPPEE 200 >gi|229891605|sp|A3RLT6|RSSA_PINFU RecName: Full=40S ribosomal protein SA gi|126362082|gb|ABO10190.1| 67kD laminin receptor precursor [Pinctada fucata] Length = 301 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 90/268 (33%), Gaps = 61/268 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + I + L G + +ME+Y++ + + +II+L +T L Sbjct: 8 LALKEEDITKFLACSTHLG--ATNVDFQMEQYVYKRKPDGVYIINLRRTWEKLLL-AARA 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++ + V++ A + + ++ G TN Sbjct: 65 IAAIENPADVCVISARPYGQRAVLKFASATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRIDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI------------DGIA 227 + IP++A+ +T+S VD IP N+ S S+ L L+A + + + Sbjct: 140 VNIPVIALCNTDSPLRYVDVAIPCNNKSVHSVGLMWWLLAREVLRLRGTISRDHPWEVMV 199 Query: 228 RQHSYMGADTKSAGETVVHSKEGMQLEE 255 + Y + E V K ++ +E Sbjct: 200 DLYFYRDPEEAEKEEQTVVEKPAVKSDE 227 >gi|297527607|ref|YP_003669631.1| ribosomal protein S2 [Staphylothermus hellenicus DSM 12710] gi|297256523|gb|ADI32732.1| ribosomal protein S2 [Staphylothermus hellenicus DSM 12710] Length = 219 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 87/218 (39%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 + + L +GV G + ME++++ RN +I+D+ +T ++ A + +S Sbjct: 27 LEKYLMAGVHIG--THICTKFMEQFVYRVRNDGLYILDVRKTDERIRIAAKFLSR--YEP 82 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I V+ ++ V++ +++ G TN L+ E Sbjct: 83 SKIAVVSVRTYGQKPVVKFCNYVGCKPFIGRFMPGTFTNPS--------LKWYFE----- 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ + D + A++EA + IPIV+ Sbjct: 130 --------------------------------PDIVLLTDPRADSQALKEAAEIGIPIVS 157 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + DT++ + +D +IP N+ +S+AL L+A + Sbjct: 158 LADTDNRTEYIDLIIPANNKGRKSLALIYWLLARQILR 195 >gi|281201828|gb|EFA76036.1| 40S ribosomal protein SA [Polysphondylium pallidum PN500] Length = 277 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 82/221 (37%), Gaps = 49/221 (22%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDT 62 Q I ++L G + ME Y++ + N THI++L++T +Q A +VI Sbjct: 42 HQDDILKMLACQTHMG--TTNCDKNMETYVWKRKDNGTHILNLAKTWEKIQLAARVIV-A 98 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + I ++ ++ V++ A + ++ G TN Sbjct: 99 IENPADISIISAQAYGQRAVLKFANFVGATAFSGRFTPGTFTNQ---------------- 142 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 I+ P L+ V D ++ + EA + I Sbjct: 143 -----------------------------IQSKFTEPRLLIVCDPVSDRQPLMEASYVNI 173 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 P +A+ +T+S D +D IP N+ SIAL L+A + Sbjct: 174 PTIALCNTDSKLDGIDIAIPCNNRGKNSIALMFWLLAREVL 214 >gi|289065033|ref|YP_003433844.1| ribosomal protein small subunit 2 [Oryza rufipogon] gi|285026115|dbj|BAI67948.1| ribosomal protein small subunit 2 [Oryza rufipogon] Length = 483 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 91/250 (36%), Gaps = 44/250 (17%) Query: 1 MALPQFTIRQLLESGVQFG-HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M + +LL + G R + + YI R+ I+D +T+ L+ AL I Sbjct: 75 MTILSMVYTKLLCTNAHLGGRRVDAHHFNV--YICGSRSGIAILDSDKTLICLRTALHFI 132 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLR 117 + + R + T ++E +N S+W +G +N+ ++ +LR Sbjct: 133 GSPIRKKCRSFLLKTNHLFRCEILEKMASC----INDSQWKIGTFFSNYLAKKKNY-RLR 187 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 TKK + ++ PD +++ +R+ I EA Sbjct: 188 -------------TKKINFGLNQQ-----------------PDCAVILNADRKSSVILEA 217 Query: 178 RRLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 R +IPI +VD+ + Y IP ND + + LF V I H M Sbjct: 218 ARSQIPIAFLVDSTIPGESHKRITYPIPANDP-IQFVYLFRHSVTKTGILERKSVHEPMQ 276 Query: 235 ADTKSAGETV 244 K+ V Sbjct: 277 TGLKAVDSLV 286 >gi|11498733|ref|NP_069962.1| 30S ribosomal protein S2 [Archaeoglobus fulgidus DSM 4304] gi|3914879|sp|O29132|RS2_ARCFU RecName: Full=30S ribosomal protein S2P gi|2649456|gb|AAB90111.1| SSU ribosomal protein S2P (rps2P) [Archaeoglobus fulgidus DSM 4304] Length = 197 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 50/229 (21%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G + + M+++IF R + +++D+ + ++ A + +S +IL Sbjct: 16 LAAGVHIGTQIKTGD--MKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLSR--YEPSKIL 71 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA + A V +K + +++ G +TN Sbjct: 72 LVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTN------------------------- 106 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 L+ R+ P+++FV D +K A+ EA + IP+VA+ D+ Sbjct: 107 ---PMLSEYRE-----------------PEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 146 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 N++ VD VIP N+ R++A+ L+A + +Y D ++ Sbjct: 147 NNSSADVDLVIPTNNKGRRALAIVYWLLAREIAKIRGQDFTYSIEDFEA 195 >gi|81176532|ref|YP_398416.1| rps2 [Triticum aestivum] gi|78675256|dbj|BAE47681.1| rps2 [Triticum aestivum] gi|169649065|gb|ACA62626.1| rps2 [Triticum aestivum] Length = 360 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 85/236 (36%), Gaps = 47/236 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + K+ YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRRVADHHFKV--YIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQA-SDCVMEAAKRSAQY--------CVNSKW-LGGMMTNWKTVS 110 + GR F+ T + E A Y +S+W +G +TN Sbjct: 59 SPSRQKGRSFFLKTNHLFIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTNS---- 114 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 + + K K + PD + +++ +R+ Sbjct: 115 -----------------------FANKKKFRSRKKKINFG----LNQQPDCVVILNADRK 147 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLVASAAI 223 I EA R +IPI ++VD+ + + Y IP ND + + LF + I Sbjct: 148 SSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPANDP-IQFVYLFRHSIMKTVI 202 >gi|212223258|ref|YP_002306494.1| 30S ribosomal protein S2 [Thermococcus onnurineus NA1] gi|212008215|gb|ACJ15597.1| SSU ribosomal protein S2P [Thermococcus onnurineus NA1] Length = 201 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 94/238 (39%), Gaps = 52/238 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 8 LDQYLAAGVHIGTQQKTQD--MKKFIYRVRQDGLYVLDVRKTDERLRIAGKFLAK--FDP 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN + ++ + Sbjct: 64 ESILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPQ-----VKNFFE-------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A++EA + +PIVA Sbjct: 111 --------------------------------PDVLIVTDPRADHQAMKEAIEIGVPIVA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +VDT + VD IP N+ +++AL ++A + R+ D K E Sbjct: 139 LVDTENFLSYVDVAIPTNNKGRKALALIYWILAREIL--YNRKEIESREDFKVPVEDF 194 >gi|297682924|ref|XP_002819153.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] gi|297682926|ref|XP_002819154.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] Length = 295 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 98/279 (35%), Gaps = 53/279 (18%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L + L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRIWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + +++++ V++ A + + +++ G N Sbjct: 66 V-AIENPADSSVISSRNTGQRDVLKFAAATGATPIAARFTPGTFANQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQATFREPGLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P +A+ +T+S VD I N+ + S+ L ++A + + S Sbjct: 140 VNLPTIALCNTDSPLHYVDIAIACNNKGAHSVGLMWWMLAQEVLR-MRGTISREHPWEVM 198 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + ++ D G+ A PE Sbjct: 199 PDLYFYRDPEEIEKEEQAAAEKAGTKDEFQGKWTAPAPE 237 >gi|1173296|sp|P46770|RSSA_ECHGR RecName: Full=40S ribosomal protein SA; AltName: Full=Laminin-binding protein p40; Short=LBP/p40 gi|495775|gb|AAB68315.1| laminin-binding protein [Echinococcus granulosus] Length = 268 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 99/281 (35%), Gaps = 57/281 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN--NTHIIDLSQTVPMLQKALQV 58 + L + IR ++ + V G N N +M++Y++ +RN HII L++T L A + Sbjct: 8 LELKEDDIRLMVAAKVHLGSTNA--NYQMQQYVY-DRNDEGNHIIHLNKTWEKLLLAARA 64 Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 I + ++ + + ++ + V ++ G TN Sbjct: 65 IC-AIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQ---------- 113 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 G ++ P L+ V D + ++E Sbjct: 114 -------------------------------SGFKE----PRLLIVCDPKGDHQPVREGS 138 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GI--ARQHSYMG 234 + IP++ +T+S VD IP N+D SIAL ++A G+ Q + Sbjct: 139 AVNIPVIGFCNTDSPLQCVDIGIPCNND-KYSIALMLWMLAREVRRIWGLDPRSQPGDVI 197 Query: 235 ADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D E V EG + E E D E A PE Sbjct: 198 MDLFLMREHVDEPPEGPEGEAQEPPFEQGKFDAAE-AEAPE 237 >gi|320101533|ref|YP_004177125.1| 30S ribosomal protein S2P [Desulfurococcus mucosus DSM 2162] gi|319753885|gb|ADV65643.1| SSU ribosomal protein S2P [Desulfurococcus mucosus DSM 2162] Length = 219 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I + L +GV G + ME +++ R + +I+D+ + L+ A + +S + Sbjct: 29 IEKYLSAGVHIG--THICTKFMEPFVYRVRSDGLYILDVRKIDERLRIAGKFLSR--YQP 84 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I V+ + + + +++ G TN Sbjct: 85 EKIAVVSVRQYGRKPAQKMCQYVGCKPFTGRFMPGTFTNPS------------------- 125 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 LK + PD++ V DT + A++EA IPIVA Sbjct: 126 ------------------LKIYFE--------PDVVVVTDTRSDAQALKEAAETGIPIVA 159 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT++ D VD +IPGN+ +S+AL ++ + Sbjct: 160 FADTDNRVDYVDLIIPGNNKGRKSLALLYWILTRQILR 197 >gi|291498618|gb|ADE08092.1| rps2 [Triticum aestivum] Length = 360 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 85/236 (36%), Gaps = 47/236 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 M + +LL + G R + K+ YI RN I+D +T+ L+ AL I Sbjct: 1 MTMLSIVCTKLLCTNAHLGRRVADHHFKV--YIRGSRNGIAILDSDKTLICLRNALHFIG 58 Query: 61 DTVARGGRILFVATKSQA-SDCVMEAAKRSAQY--------CVNSKW-LGGMMTNWKTVS 110 + GR F+ T + E A Y +S+W +G +TN Sbjct: 59 SPSRQKGRSFFLKTNHLFIYEITEEMASYLRSYLRNVNSHCFDDSQWKIGAFLTNS---- 114 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 + + K K + PD + +++ +R+ Sbjct: 115 -----------------------FANKKKFRSRKKKINFG----LNQQPDCVVILNADRK 147 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLVASAAI 223 I EA R +IPI ++VD+ + + Y IP ND + + LF + I Sbjct: 148 SSVILEADRSQIPIPSLVDSTIPWESYKRITYPIPANDP-IQFVYLFRHSIMKTVI 202 >gi|296243114|ref|YP_003650601.1| 30S ribosomal protein S2P [Thermosphaera aggregans DSM 11486] gi|296095698|gb|ADG91649.1| SSU ribosomal protein S2P [Thermosphaera aggregans DSM 11486] Length = 219 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + + L +GV G + ME +++ R + +I+D+ + L+ A + ++ Sbjct: 29 VDKYLSAGVHIG--THICTKFMEPFVYRVRSDGLYILDVRKIDDRLRIAGKFLAR--YEP 84 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +I V+ + V + + ++L G TN L+ E Sbjct: 85 AKIAVVSVRQYGKKPVSKMCQYIGCKTFTGRFLPGTFTNPS--------LKWYYE----- 131 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ + D + A++EA + +PIV+ Sbjct: 132 --------------------------------PDIVLLTDPRADAQALKEAAEIGLPIVS 159 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT++ D +D VIPGN+ +S+AL ++ + Sbjct: 160 FADTDNKTDFIDLVIPGNNKGRKSLALLYWILTRQVLR 197 >gi|89280718|ref|YP_514652.1| ribosomal protein S2 [Oryza sativa Indica Group] gi|769721|dbj|BAA06825.1| ORF483 [Oryza sativa Japonica Group] gi|74100085|gb|AAZ99249.1| ribosomal protein S2 [Oryza sativa Indica Group] gi|74100140|gb|AAZ99303.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|74100194|gb|AAZ99356.1| ribosomal protein S2 [Oryza sativa Japonica Group] gi|285026178|dbj|BAI68010.1| ribosomal protein small subunit 2 [Oryza sativa Indica Group] Length = 483 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 90/250 (36%), Gaps = 44/250 (17%) Query: 1 MALPQFTIRQLLESGVQFG-HRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVI 59 M + +LL + G R + + YI R+ I+D +T+ L+ AL I Sbjct: 75 MTILSMVYTKLLCTNAHLGGRRVDAHHFNV--YICGSRSGIAILDSDKTLICLRTALHFI 132 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLR 117 + + R + T ++E +N S+W +G +N+ + +LR Sbjct: 133 GSPIRKKCRSFLLKTNHLFRCEILEKMASC----INDSQWKIGTFFSNYLAKKKKF-RLR 187 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 TKK + ++ PD +++ +R+ I EA Sbjct: 188 -------------TKKINFGLNQQ-----------------PDCAVILNADRKSSVILEA 217 Query: 178 RRLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234 R +IPI +VD+ + Y IP ND + + LF V I H M Sbjct: 218 ARSQIPIAFLVDSTIPGESHKRITYPIPANDP-IQFVYLFRHSVTKTGILERKSVHEPMQ 276 Query: 235 ADTKSAGETV 244 K+ V Sbjct: 277 TGLKAVDSLV 286 >gi|57641431|ref|YP_183909.1| 30S ribosomal protein S2 [Thermococcus kodakarensis KOD1] gi|73918000|sp|Q5JJD2|RS2_PYRKO RecName: Full=30S ribosomal protein S2P gi|57159755|dbj|BAD85685.1| SSU ribosomal protein S2P [Thermococcus kodakarensis KOD1] Length = 201 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 52/238 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 8 LDQYLAAGVHIGTQQKTKD--MKKFIYRVRQDGLYVLDVRKTDERLRVAGKFLAK--FDP 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN + V I+ Sbjct: 64 ESILAVSVRLYGQRPVKKFGEVTGAKAIPGRFLPGTMTNPQ-VKNFIE------------ 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A++EA + IPIVA Sbjct: 111 --------------------------------PDVLIVTDPRADHQALKEAVEIGIPIVA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +VDT + VD IP N+ +++AL ++A + R+ D K E Sbjct: 139 LVDTENFLSYVDIAIPTNNKGRKALALIYWILAREVL--YNRKEIESREDFKIPVEDF 194 >gi|315229902|ref|YP_004070338.1| 30S ribosomal protein SAe (S2p) [Thermococcus barophilus MP] gi|315182930|gb|ADT83115.1| SSU ribosomal protein SAe (S2p) [Thermococcus barophilus MP] Length = 201 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 89/217 (41%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 8 LDQYLAAGVHIGTQQKTKD--MKKFIYRVRQDGLYVLDVRKTDERLRIAGKFLAK--FEP 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++L V+ + V + + + + ++L G MTN ++ + Sbjct: 64 DKVLAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPA-----VKNFFE-------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A++EA + IPIVA Sbjct: 111 --------------------------------PDVLIVTDPRADHQALKEAVEVGIPIVA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDT + VD IP N+ +++AL ++A + Sbjct: 139 LVDTENLLSYVDLAIPTNNKGRKALALIYWILAREIL 175 >gi|167515608|ref|XP_001742145.1| hypothetical protein [Monosiga brevicollis MX1] gi|229891593|sp|A9UPA2|RSSA_MONBE RecName: Full=40S ribosomal protein SA gi|163778769|gb|EDQ92383.1| predicted protein [Monosiga brevicollis MX1] Length = 278 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 86/219 (39%), Gaps = 50/219 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++LL + V G M +Y++ R + ++IDL++T + A ++I+ V Sbjct: 15 IQKLLMAKVHLG--ASNCTTAMSKYVYKRRSDGVNVIDLNKTYEKIVLAARIIA-AVDSP 71 Query: 67 GRILFVATKSQASDCVMEAAKRSA-QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 + ++ ++ +++ + + ++ G TN + ++ Q+ Sbjct: 72 ANVCAISGRNFGQRAILKFCNHIGGAFPIAGRFTPGAFTN--QIQKAFQE---------- 119 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ + D + A++EA + IPI+ Sbjct: 120 ---------------------------------PRLLVLTDPLVDHQAVREASYVNIPII 146 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++ D ++ VD VIP N+ S +I + ++A + Sbjct: 147 SLCDVDAPLRYVDVVIPCNNKSPHAIGIVWWMLAREVLR 185 >gi|115844885|ref|XP_792396.2| PREDICTED: similar to 34/67 kD laminin binding protein [Strongylocentrotus purpuratus] Length = 172 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 76/207 (36%), Gaps = 49/207 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + +++ L SG G + + KM YI+ + + + II+L +T L A ++I Sbjct: 8 LALKEDDVQKFLASGAHIG--SSNMDYKMAPYIYKRKPDGSFIINLRKTWEKLLLAARII 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 V + ++++ V++ + V ++ G TN Sbjct: 66 V-AVENPADVCVISSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P ++ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRILIVTDPRSDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDD 206 + IP++A+ +++S VD IP N+ Sbjct: 140 VNIPVIALCNSDSPLRHVDIAIPCNNK 166 >gi|13541230|ref|NP_110918.1| 30S ribosomal protein S2 [Thermoplasma volcanium GSS1] gi|20978671|sp|Q97BQ4|RS2_THEVO RecName: Full=30S ribosomal protein S2P Length = 199 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 50/212 (23%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +SGV G + + M+ YIF RN +I+D+ +T L A ++++ IL Sbjct: 14 KSGVHIGTQVKSSD--MKPYIFKIRNDGLYILDVKKTNSKLIAAGKMLAR--FDPQDILV 69 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 VA + A V + A+ + + ++ G +TN L+ +E+ Sbjct: 70 VAQRQYAFRPVAKFAEVTGAVSITGRFNPGTLTNPS--------LKFYKEV--------- 112 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 ++ V D + A++EA ++ IPI+A+ D N Sbjct: 113 ----------------------------KVIVVTDPLADVQAMKEAIKIGIPIIALCDAN 144 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + D VD VIP N+ RS+A+ L+A + Sbjct: 145 NKTDFVDLVIPTNNKGRRSLAVIYWLLAREIL 176 >gi|16082199|ref|NP_394646.1| 30S ribosomal protein S2 [Thermoplasma acidophilum DSM 1728] gi|12230550|sp|P57712|RS2_THEAC RecName: Full=30S ribosomal protein S2P gi|10640501|emb|CAC12315.1| probable 30S ribosomal protein S2 [Thermoplasma acidophilum] Length = 199 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 53/224 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVI 59 M +P+ ++ SGV G + + M+ YIF RN +I+D+ +T L A +++ Sbjct: 5 MLIPEEEYQK---SGVHIGTQVKSSD--MKPYIFKIRNDGLYILDVKKTNSKLIVAGKML 59 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + IL VA + A V + A+ + + ++ G +TN L+ Sbjct: 60 AR--FEPQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPS--------LKFY 109 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +E+ ++ V D + A++EA + Sbjct: 110 KEV-------------------------------------KVIIVTDPLADVQAMKEAVK 132 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + IPI+A+ D N+ D VD +IP N+ RS+A+ L+A + Sbjct: 133 IGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREIL 176 >gi|240104016|ref|YP_002960325.1| 30S ribosomal protein S2 [Thermococcus gammatolerans EJ3] gi|239911570|gb|ACS34461.1| SSU ribosomal protein S2P (rps2P) [Thermococcus gammatolerans EJ3] Length = 201 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 94/238 (39%), Gaps = 52/238 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 8 LDQYLAAGVHIGTQQKTQD--MKKFIYRVRQDGLYVLDVRKTDERLRIAGKFLAK--FDP 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN + ++ + Sbjct: 64 ESILAVSVRLYGQKPVKKFGEVTGARTIPGRFLPGTMTNPQ-----VKNFFE-------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A++EA + IPIVA Sbjct: 111 --------------------------------PDVIIVTDPRADHQAMKEAIEVGIPIVA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +VDT + VD IP N+ +++AL ++A + R+ D K E Sbjct: 139 LVDTENFLSYVDLAIPTNNKGRKALALIYWILAREIL--YNRKEIESREDFKVPVEDF 194 >gi|147921496|ref|YP_684689.1| 30S ribosomal protein S2 [uncultured methanogenic archaeon RC-I] gi|121683244|sp|Q0W8D0|RS2_UNCMA RecName: Full=30S ribosomal protein S2P gi|110620085|emb|CAJ35363.1| 30S ribosomal protein S2P [uncultured methanogenic archaeon RC-I] Length = 207 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 82/226 (36%), Gaps = 50/226 (22%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV G + M+++I+ R + +++D+ T ++ A + +S Sbjct: 19 IPMDEYLAAGVHIGTQQKT--EDMKKFIYRVRSDGLYVLDVQSTDERIRAAAKFLSR--Y 74 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +L V + A+ + +++ G +TN + + Sbjct: 75 DPANVLVVCARQYGQHPAEMFARAIGARHIVGRFIPGTLTNPVYMFFAE----------- 123 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + A+ EA + +P+ Sbjct: 124 ----------------------------------PDVVVVTDPIGDAQAVTEAISIGVPV 149 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 VA+ DTN+ +D VIP N+ +++AL L+A Q Sbjct: 150 VAMCDTNNMTSNIDLVIPTNNKGRKALALVYWLLAREVSRERNEQG 195 >gi|14520753|ref|NP_126228.1| 30S ribosomal protein S2 [Pyrococcus abyssi GE5] gi|12230555|sp|Q9V191|RS2_PYRAB RecName: Full=30S ribosomal protein S2P gi|5457969|emb|CAB49459.1| rps2P SSU ribosomal protein S2P [Pyrococcus abyssi GE5] Length = 202 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 9 LDQYLAAGVHIGTQQKTKD--MKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAR--FDP 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN ++ + Sbjct: 65 QSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPA-----VKNFFE-------- 111 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ + D + A++EA + IPIVA Sbjct: 112 --------------------------------PDVIIITDPRADHQAMKEAIEIGIPIVA 139 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDT + VD IP N+ +++AL ++A + Sbjct: 140 LVDTENLLSYVDLAIPTNNKGRKALALIYWILAREIL 176 >gi|14324616|dbj|BAB59543.1| ribosomal protein small subunit S0 [Thermoplasma volcanium GSS1] Length = 206 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 50/212 (23%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +SGV G + + M+ YIF RN +I+D+ +T L A ++++ IL Sbjct: 21 KSGVHIGTQVKSSD--MKPYIFKIRNDGLYILDVKKTNSKLIAAGKMLAR--FDPQDILV 76 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 VA + A V + A+ + + ++ G +TN L+ +E+ Sbjct: 77 VAQRQYAFRPVAKFAEVTGAVSITGRFNPGTLTNPS--------LKFYKEV--------- 119 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 ++ V D + A++EA ++ IPI+A+ D N Sbjct: 120 ----------------------------KVIVVTDPLADVQAMKEAIKIGIPIIALCDAN 151 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + D VD VIP N+ RS+A+ L+A + Sbjct: 152 NKTDFVDLVIPTNNKGRRSLAVIYWLLAREIL 183 >gi|70605938|ref|YP_254808.1| 30S ribosomal protein S2 [Sulfolobus acidocaldarius DSM 639] gi|73920775|sp|P39478|RS2_SULAC RecName: Full=30S ribosomal protein S2P gi|68566586|gb|AAY79515.1| 30S ribosomal protein S2P [Sulfolobus acidocaldarius DSM 639] Length = 225 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 50/218 (22%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G MER+I+ R +++D+ + L+ A + IS R +L Sbjct: 37 LSAGVHIGTHT--CTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISR--FRPEAVL 92 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA++ A V + ++ ++ ++ G +TN Sbjct: 93 TVASRPYAFTPVQKFSEVVRGKEISGRFPPGTLTNP------------------------ 128 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 LD + P+++ V D + AI+EA ++ IPIVA DT Sbjct: 129 -----------------YLDNYIE----PEVLIVTDPRTDLQAIKEASKVGIPIVAFTDT 167 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++ D +D +IP N+ +S+AL ++A + Sbjct: 168 DARVDFIDVIIPANNKGRKSLALLYWVLARQILRERKE 205 >gi|254172783|ref|ZP_04879457.1| ribosomal protein S2 [Thermococcus sp. AM4] gi|214032939|gb|EEB73767.1| ribosomal protein S2 [Thermococcus sp. AM4] Length = 201 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 8 LDQYLAAGVHIGTQQKTQD--MKKFIYRVRQDGLYVLDVRKTDERLRIAGKFLAK--FDP 63 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN + ++ + Sbjct: 64 ESILAVSVRLYGQKPVKKFGEVTGARTIPGRFLPGTMTNPQ-----VKNFFE-------- 110 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD++ V D + A++EA + IPIVA Sbjct: 111 --------------------------------PDVIIVTDPRADHQAMKEAIEVGIPIVA 138 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDT + VD IP N+ +++AL ++A + Sbjct: 139 LVDTENFLSYVDLAIPTNNKGRKALALIYWILAREIL 175 >gi|242035259|ref|XP_002465024.1| hypothetical protein SORBIDRAFT_01g030646 [Sorghum bicolor] gi|241918878|gb|EER92022.1| hypothetical protein SORBIDRAFT_01g030646 [Sorghum bicolor] Length = 118 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 26 NPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEA 85 NPKM YI + THI +L++T L +A ++ D ++G L V TK +A++ V A Sbjct: 1 NPKMALYISAKCKGTHIANLARTTRFLSEACDLVFDAASQGKSFLIVGTKKRATNLVASA 60 Query: 86 AKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-ELLNKENQGFTKKERLNIER 140 RS + N KW GM+TNW + + RDL E + K++ +++ Sbjct: 61 VIRSCYHYANKKWFSGMLTNWSITKTRLSQFRDLRAEEKMGKFHHLPKRDSAILKK 116 >gi|324530679|gb|ADY49104.1| 40S ribosomal protein SA [Ascaris suum] Length = 178 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 77/218 (35%), Gaps = 49/218 (22%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVIS 60 L + + +LL G + +ME+Y++ R + THII L +T L Sbjct: 9 TLKEEDVMKLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKLLL-AARAV 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 + + V+ + A +++ A + + ++ G +TN Sbjct: 66 AAIENPADVCVVSARPYAQRALLKFAAHTGATPIFGRFTPGCLTNQ-------------- 111 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I+ P L+ V D + A+ EA + Sbjct: 112 -------------------------------IQKSFKEPRLLIVSDPRVDHQAVTEASYV 140 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 +P+++ +T+S VD IP N+ +SI L ++ Sbjct: 141 GVPVISFCNTDSPLKFVDIAIPCNNKGPQSIGLMWWML 178 >gi|40889978|pdb|1VI5|A Chain A, Crystal Structure Of Ribosomal Protein S2p gi|40889979|pdb|1VI5|B Chain B, Crystal Structure Of Ribosomal Protein S2p gi|40889980|pdb|1VI5|C Chain C, Crystal Structure Of Ribosomal Protein S2p gi|40889981|pdb|1VI5|D Chain D, Crystal Structure Of Ribosomal Protein S2p Length = 208 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 95/232 (40%), Gaps = 50/232 (21%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G + + K ++IF R + +++D+ + ++ A + +S +IL Sbjct: 17 LAAGVHIGTQIKTGDXK--KFIFKVRQDGLYVLDIRKLDERIRVAAKFLSR--YEPSKIL 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA + A V +K + +++ G +TN Sbjct: 73 LVAARQYAHKPVQXFSKVVGSDYIVGRFIPGTLTN------------------------- 107 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 L+ R+ P+++FV D +K A+ EA + IP+VA+ D+ Sbjct: 108 ---PXLSEYRE-----------------PEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGE 242 N++ VD VIP N+ R++A+ L+A + +Y D ++ E Sbjct: 148 NNSSADVDLVIPTNNKGRRALAIVYWLLAREIAKIRGQDFTYSIEDFEAELE 199 >gi|145510154|ref|XP_001441010.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408249|emb|CAK73613.1| unnamed protein product [Paramecium tetraurelia] Length = 236 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 108/280 (38%), Gaps = 69/280 (24%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + I++L+ S G + M+RY+ N ++I++L +T ++ A +VI Sbjct: 1 MSRKEQDIKRLIASQCHVG--TKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 + + + ++ V+++ V++ A + A +++W G +TN + KL++ Sbjct: 59 A-AIEQPQDVMVVSSRPIGQRAVIKFAHYTLASSTRSARWTPGTLTNQSN--SASGKLQE 115 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 P L+ V D + ++ AI EA Sbjct: 116 ----------------------------------------PQLLIVTDPHLDRQAIVEAS 135 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS--AAIDGIARQHSYMGA- 235 + IP++A+ ++++ VD IP + ++SI++ L+A + G RQ Sbjct: 136 YVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYWLLAREVKILRGELRQDEEWDVL 195 Query: 236 -------------------DTKSAGETVVHSKEGMQLEED 256 K E EG + E+D Sbjct: 196 VDLFYHKEITNDQLGITDNQVKQEAEDHEQQAEGEKAEKD 235 >gi|330508375|ref|YP_004384803.1| 30S ribosomal protein S2 [Methanosaeta concilii GP-6] gi|328929183|gb|AEB68985.1| ribosomal protein S2 [Methanosaeta concilii GP-6] Length = 206 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 87/236 (36%), Gaps = 52/236 (22%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 I + L +GV G + N M YI+ R + +++D+ T ++ A + +S Sbjct: 17 IPIDEYLAAGVHIGTQ-QKTND-MMPYIYRVRSDGLYVLDVQSTDKRIRLAAKFLSK--Y 72 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 IL V+ + + AK + +++ +TN R E Sbjct: 73 DPTNILIVSARQYGQRPALMFAKATGATANVGRFVPNTLTNPA--------FRGFIE--- 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ D + + A+ EA + IP+ Sbjct: 122 ----------------------------------PDVIIATDPSGDAQAVNEAVDVGIPV 147 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGADTK 238 +A+ DTN+ VD VIP N+ +++ L L+A + G + Y +D + Sbjct: 148 IALCDTNNMTSNVDLVIPTNNKGRKALTLIYWLLARQVLRESGQEDRFKYTISDFE 203 >gi|730683|sp|P38981|RSSA_URECA RecName: Full=40S ribosomal protein SA; AltName: Full=Laminin-binding protein p40; Short=LBP/p40 gi|476088|gb|AAA90978.1| 34/67 kD laminin binding protein [Urechis caupo] Length = 317 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + + L G + +ME+Y++ R + T II++ +T + Sbjct: 8 LALKEEDVTKFLACASHLG--ANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLL-AARA 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I ++ + V++ A + + ++ G TN Sbjct: 65 IAAIENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQTAFREPRLLVVTDPYTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A+ +T+S VD IP N+ S S+ L ++A + Sbjct: 140 VNIPVIALTNTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLR 184 >gi|332225333|ref|XP_003261835.1| PREDICTED: 40S ribosomal protein SA-like [Nomascus leucogenys] Length = 293 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 95/280 (33%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + I+L +T L A + I Sbjct: 8 LQMKEEDVLKFLTAGTHLG-GTNL-DFQMEQYIYKRKSDGIFFINLKRTWEKLLLAARTI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ +++ A + + ++ TN Sbjct: 66 V-AIENPAVVSVISSRNTGQRAMLKFAAATGATPIAGRFTPRTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + EA Sbjct: 112 --------------------------------IQAAFWEPRLLVVTDPRANHQPLMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCNTDSPLCYVDITIPCNNKGAHSVGLMWWMLAREVLCMHGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 200 DLYFYKDPEEIEKEEQAAAEKAVTKEE--FPGEWTAPAPE 237 >gi|303244027|ref|ZP_07330366.1| ribosomal protein S2 [Methanothermococcus okinawensis IH1] gi|302485679|gb|EFL48604.1| ribosomal protein S2 [Methanothermococcus okinawensis IH1] Length = 220 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 101/248 (40%), Gaps = 54/248 (21%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L SG+ G + M+R+I+ R + +++D+ +T ++ A + +S+ Sbjct: 9 TLDTYLASGIHIGTQQKT--EDMKRFIYRVRSDGLYVLDVRKTDERIRLAAKFLSN--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 IL V+ + + + + + + V +++ G +TN + Sbjct: 65 PEDILAVSRRIYSVGPLKKFGQVTGINTVAGRFVPGTLTNPSS----------------- 107 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ L+ P+++F+ D ++ A++EA + IPI+ Sbjct: 108 --------------------RKFLE--------PEVLFLSDPRVDRQALKEAIEIGIPII 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 + DT +D++IP N+ ++++L L+A + + +G D E + Sbjct: 140 GMCDTEHLTSFIDFIIPTNNKGRKAVSLIYYLIAREYL----KNRGLIGEDVPFTYEEFL 195 Query: 246 HSKEGMQL 253 +++ Sbjct: 196 ERAMNVKV 203 >gi|255524241|ref|ZP_05391200.1| 30S ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296185362|ref|ZP_06853772.1| putative ribosomal protein S2 [Clostridium carboxidivorans P7] gi|255512066|gb|EET88347.1| 30S ribosomal protein S2 [Clostridium carboxidivorans P7] gi|296050196|gb|EFG89620.1| putative ribosomal protein S2 [Clostridium carboxidivorans P7] Length = 80 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 37/75 (49%), Positives = 50/75 (66%) Query: 156 GGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFC 215 G +F+VD +EK AI EA+ L IP+VA+VDTN +PD VDYVIPGNDD+ R++ L Sbjct: 3 SGNVGALFIVDPRKEKNAILEAKILGIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLIT 62 Query: 216 DLVASAAIDGIARQH 230 +A A I+G + Sbjct: 63 AKMADAIIEGRQGEQ 77 >gi|289580114|ref|YP_003478580.1| ribosomal protein S2 [Natrialba magadii ATCC 43099] gi|289529667|gb|ADD04018.1| ribosomal protein S2 [Natrialba magadii ATCC 43099] Length = 263 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + N MER+I R + +++D+S+T ++ A +S+ Sbjct: 76 IPVEDYLGAGVHIGTQ-QKTND-MERFIHRVRTDGLYVLDVSKTDGRIRTAADFLSN--Y 131 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A+ +++ G +TN K Sbjct: 132 DPEQILVTSSRQYGRFPAEKFAEAVGARARTGRFIPGTLTNPK----------------- 174 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 175 ------------------------YDGYIE----PDVVVVTDPIGDAQAVKEAITVGIPV 206 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD V+P N+ +++++ L+A+ +D + SY D +S Sbjct: 207 IAMCDSNNQVSNVDLVVPTNNKGRKALSVVYWLLANEVLDRRGAEPSYSLEDFES 261 >gi|296200682|ref|XP_002747732.1| PREDICTED: 40S ribosomal protein SA-like [Callithrix jacchus] Length = 340 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 108/297 (36%), Gaps = 72/297 (24%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISD 61 + + + + L +G G L + +ME+ ++ ++ +II+L +T L +A +VI Sbjct: 10 MKEEEVLKFLAAGTHLG-GTNL-DFQMEQCMYKRKSGGIYIINLKRTWEKLLQAARVIV- 66 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + + ++++ V++ A + V ++ G TN Sbjct: 67 AIENPADVSVTSSRNTGQRAVLKFAAATGATPVAGRFTPGTSTNQ--------------- 111 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 I+ P L+ D + + EA + Sbjct: 112 ------------------------------IQAAFREPRLLVATDPRADHQLLTEASYVN 141 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH-------- 230 +P +A+ +T+S VD IP N+ + S+ L ++A + I+R+H Sbjct: 142 LPTIALCNTDSPLRYVDVAIPCNNKGAHSVGLMWWMLAREVLRISGTISREHPWEVMPDL 201 Query: 231 ------SYMGADTKSAGETVVHSKEGMQLEEDSQSSE-----SSVLDGQEVAVVPEL 276 + + ++A E V +KE Q E + + E V D E VP + Sbjct: 202 CFYRDPEEIEKEEQAAAEKAV-TKEEFQGEWTAPAREFIATQPEVADWSESVQVPSV 257 >gi|108773057|ref|YP_635966.1| ribosomal protein S2 [Scenedesmus obliquus] gi|122231591|sp|Q1KVV8|RR2B_SCEOB RecName: Full=30S ribosomal protein S2, chloroplastic 2 gi|88696623|gb|ABD48249.1| ribosomal protein S2 fragment b [Scenedesmus obliquus] Length = 379 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 17/212 (8%) Query: 39 NTHIIDLSQTVPMLQKALQ-VISDTVARGGRILFVATK-SQASDCVMEAA--KRSAQYCV 94 N+ ++++ L++ + IS + + + + + A +R ++ Sbjct: 153 NSTFTKITESQKSLKQLYKKTISQYAVVSSKFIVQQNNFKKFQKNLKQFASEQRLLKFLP 212 Query: 95 NSKWLGGMMTNWKTV-SQSIQKLRD------LEELLNKENQGFTKKERLNIERKRDKLKR 147 ++L T + ++K D +E++ +++ + +KK ++K +L++ Sbjct: 213 KLRYLPTSQTKMYEIVELFMKKFVDPKLSYPMEQIYDQKLKFTSKKIAATRKQKWQRLEK 272 Query: 148 ALDGIRDMGGLP------DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVI 201 GI M + ++ ++ E A+ E R+L + I AVVDTN NP VD++I Sbjct: 273 YFGGITKMAKMNTKQISKNVAIIIGQQEEMNAVHECRKLGMKIFAVVDTNCNPKFVDHII 332 Query: 202 PGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 P NDDS SI + + G + Sbjct: 333 PANDDSRNSIKYILGEMLTYIRLGQKLRKKVS 364 >gi|111572543|gb|ABH10628.1| laminin receptor [Litopenaeus vannamei] Length = 320 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 81/225 (36%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 MAL + + + L + G + N +ME+Y+F R + HII L +T + Sbjct: 8 MALEEDDVTRFLAASTHLG--SSNMNFQMEQYVFKRRQDGVHIIHLRKTYEKILL-AARA 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A+ + + ++ G TN Sbjct: 65 IAAIENPADVYTISSRPMGQRAVLKFARYTGATPIAGRFTPGAFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D ++ I EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPISDRQPITEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + IP++A +T+S VD IP N+ S SI L ++A + Sbjct: 140 VSIPVIAFCNTDSPLRYVDIAIPCNNRSPHSIGLMWWMLAREVLR 184 >gi|113170510|ref|YP_717301.1| Rps2 [Ostreococcus tauri] gi|112806917|emb|CAL36423.1| unnamed protein product [Ostreococcus tauri] Length = 208 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 5/197 (2%) Query: 24 LWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 +P++ + RN+ ++D ++ +L+KAL + ILF+ + S Sbjct: 16 KVHPELFGCLEGFRNHLALVDTEKSKLLLKKALIFLRALQQDNKTILFINNNPKLSFLTK 75 Query: 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRD 143 + A Q N W+ G++TNW I + E+ KK+ + K Sbjct: 76 QTAVSLDQPYSNEYWIPGLLTNWTGSQSMIHSFKYSEQYFGSFLD---KKKV--VFPKYV 130 Query: 144 KLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 K K+ L+G+ P + ++ T I+EA+ L IPIVA + V+Y IP Sbjct: 131 KQKKKLEGLTAFKHRPSALVLLQTTGNASIIREAQLLNIPIVAFTNCTKTVSNVEYPIPF 190 Query: 204 NDDSSRSIALFCDLVAS 220 + D+ + FC ++ Sbjct: 191 DTDAVAIVYFFCSILCK 207 >gi|162606370|ref|XP_001713215.1| 40S ribosomal protein SSA [Guillardia theta] gi|12580681|emb|CAC26999.1| 40S ribosomal protein SSA [Guillardia theta] Length = 199 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 49/224 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M + I++LL V G M+ Y++ +R + +II++ +T+ ++ A + I Sbjct: 1 MIYNENDIKKLLICNVHIG--LSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAI 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 I+ V++ + +++ ++ C+ KW+ G +TN ++ + + Sbjct: 59 ISI-EHPKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTN-----KTSKLFEE- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ + D +K A+ EA Sbjct: 112 ---------------------------------------PRLLIISDPLLDKQALLEASY 132 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + IP+++V +T+S +D IPGN+ S AL L+ + Sbjct: 133 VNIPVISVCNTDSFLSYIDIAIPGNNKDRYSFALIIWLLTKKIL 176 >gi|290980450|ref|XP_002672945.1| predicted protein [Naegleria gruberi] gi|284086525|gb|EFC40201.1| predicted protein [Naegleria gruberi] Length = 258 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 50/219 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFC--ERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++Q+L G +N + M++Y+ +++ TH+I++++T L A +V+ T+ Sbjct: 19 VQQMLACECHKGTKNLETD--MQKYVHGRSQKDGTHVINVAKTHEKLLLAARVLV-TIEN 75 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 I +++K V++ + + K+ G TN Q K + Sbjct: 76 PKDICAISSKQYGHRAVLKFGSYTGANYLAGKFTPGTFTN-----QVQAKFME------- 123 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P ++ V D + AI+EA + IP++ Sbjct: 124 ---------------------------------PRVLIVSDPRSDYQAIKEASKANIPVI 150 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 A DT+S VD IP N+ + SIAL ++A + Sbjct: 151 AFADTDSPLKFVDIAIPVNNKNKNSIALMYWMLAREVLR 189 >gi|12231015|sp|O59295|RS2_PYRHO RecName: Full=30S ribosomal protein S2P Length = 202 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 88/217 (40%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 9 LDQYLAAGVHIGTQQKTKD--MKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAR--FEP 64 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN ++ + Sbjct: 65 QSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPA-----VKNFFE-------- 111 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P+++ + D + A++EA + IPIVA Sbjct: 112 --------------------------------PEVIIITDPRADHQAMKEAIEIGIPIVA 139 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDT + VD IP N+ +++AL ++A + Sbjct: 140 LVDTENLLSYVDLAIPTNNKGRKALALIYWILAREIL 176 >gi|14591402|ref|NP_143481.1| 30S ribosomal protein S2 [Pyrococcus horikoshii OT3] gi|3258058|dbj|BAA30741.1| 205aa long hypothetical 30S ribosomal protein S2 [Pyrococcus horikoshii OT3] Length = 205 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 88/217 (40%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + Q L +GV G + + M+++I+ R + +++D+ +T L+ A + ++ Sbjct: 12 LDQYLAAGVHIGTQQKTKD--MKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAR--FEP 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 IL V+ + V + + + + ++L G MTN ++ + Sbjct: 68 QSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNPA-----VKNFFE-------- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P+++ + D + A++EA + IPIVA Sbjct: 115 --------------------------------PEVIIITDPRADHQAMKEAIEIGIPIVA 142 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +VDT + VD IP N+ +++AL ++A + Sbjct: 143 LVDTENLLSYVDLAIPTNNKGRKALALIYWILAREIL 179 >gi|330818775|ref|XP_003291514.1| 40S ribosomal protein SA [Dictyostelium purpureum] gi|325078320|gb|EGC31978.1| 40S ribosomal protein SA [Dictyostelium purpureum] Length = 244 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 96/268 (35%), Gaps = 55/268 (20%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTH-IIDLSQTVPMLQKALQVISDT 62 Q I ++L G N + ME Y + ++N H II+L++T +Q A +VI Sbjct: 11 HQEDILKMLACQTHLGSNNVSID--MESYTWKRKDNGHFIINLAKTWEKIQLAARVIV-A 67 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + I ++ K V++ A + ++ G TN Sbjct: 68 IENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQ---------------- 111 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 I+ P L+ V D ++ + EA + I Sbjct: 112 -----------------------------IQSKFTEPRLLIVADPLLDRQPLIEASYVNI 142 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTKSA 240 P +A+ DT+S D VD IP N+ SIAL L+A + G +++ Sbjct: 143 PTIALCDTSSCLDGVDIAIPCNNRGKNSIALMFWLLAREVLYLRGTLPRNTSWSVKV--- 199 Query: 241 GETVVHSKEGMQLEEDSQSSESSVLDGQ 268 + ++ + E++ + ++ + Sbjct: 200 -DLFIYRDTDEEPEKEKERLVAAPATTE 226 >gi|167377034|ref|XP_001734259.1| 40S ribosomal protein SA [Entamoeba dispar SAW760] gi|165904356|gb|EDR29596.1| 40S ribosomal protein SA, putative [Entamoeba dispar SAW760] Length = 230 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 93/261 (35%), Gaps = 55/261 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNT-HIIDLSQTVPMLQKALQVISDTVAR- 65 I+ ++ V G N ME Y++ NN I +L +T L A +VI+ Sbjct: 20 IKMMVACRVHIG--ATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVIAGISNET 77 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ VA + A ++ K + V ++ G TN Q +K + Sbjct: 78 PSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTN-----QIQKKFME------- 125 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + + A++E+ + +P + Sbjct: 126 ---------------------------------PRLIIVSDPSVDHQALRESGYINVPTI 152 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK--SAGET 243 A +++++ VD IP N+ S SI L ++ + R + D K + Sbjct: 153 AFCNSDNSLKNVDIAIPCNNRSRLSIGLMWWMLTREIL----RYQGKLARDEKWDVMVDL 208 Query: 244 VVHSKEGMQLEEDSQSSESSV 264 +H + + + + E V Sbjct: 209 FLHRELDAKKDAPVIAGEEKV 229 >gi|284165815|ref|YP_003404094.1| ribosomal protein S2 [Haloterrigena turkmenica DSM 5511] gi|284015470|gb|ADB61421.1| ribosomal protein S2 [Haloterrigena turkmenica DSM 5511] Length = 269 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + + MER+I R + +++D+S+T ++ A +++ Sbjct: 82 IPVEDYLGAGVHIGTQQKTSD--MERFIHRVRTDGLYVLDVSKTDGRIRTAADFLAN--Y 137 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A+ +++ G +TN K Sbjct: 138 DPEQILVTSSRQYGRFPAEKFAEAVGARARTGRFIPGTLTNPK----------------- 180 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 181 ------------------------YDGYIE----PDVLVVTDPIGDAQAVKEAITVGIPV 212 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD V+P N+ +++++ L+A+ +D + SY D +S Sbjct: 213 IAMCDSNNQVSNVDLVVPTNNKGRKALSVVYWLLANEVLDRRGAEPSYSLDDFES 267 >gi|156936983|ref|YP_001434779.1| 30S ribosomal protein S2 [Ignicoccus hospitalis KIN4/I] gi|209573656|sp|A8A8X0|RS2_IGNH4 RecName: Full=30S ribosomal protein S2P gi|156565967|gb|ABU81372.1| SSU ribosomal protein S2P [Ignicoccus hospitalis KIN4/I] Length = 212 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 51/236 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN--NTHIIDLSQTVPMLQKALQVISDTV 63 + L+ GV G + M+R+++ RN I+D+ + ++ A + +S Sbjct: 14 IPLEMYLQHGVHIG--TKMVTNYMKRFVYKRRNIDGLAILDVRKIDQRIRVAAKFLSR-- 69 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 +I+ V+ + V A+ + V +++ G +TN Sbjct: 70 FEPEKIMVVSVRQYGHKPVTMFAQFTGAKPVIGRFVPGTLTNPA---------------- 113 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 L+ + PD++ V DT ++ AI EA + IP Sbjct: 114 ---------------------LEVYYE--------PDVILVTDTRMDQQAIVEAAEIGIP 144 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +VA+ DT++ + VD +IPGN+ +S+AL L+ + + D + Sbjct: 145 VVAICDTDNKTENVDLIIPGNNKGRKSLALLYWLLTRQVLVERGQLSPDAPEDQPA 200 >gi|322369527|ref|ZP_08044092.1| 30S ribosomal protein S2 [Haladaptatus paucihalophilus DX253] gi|320551259|gb|EFW92908.1| 30S ribosomal protein S2 [Haladaptatus paucihalophilus DX253] Length = 259 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 95/235 (40%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + MER+I R + +++D+S+T ++ A ++D Sbjct: 72 IPVEDYLGAGVHIGTQQKT--EDMERFIHRVRTDGLYVLDVSKTDQRIRTAANFLAD--Y 127 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A +++ G +TN K Sbjct: 128 NPEQILVTSSRQYGRFPAEKFADAVGARARTGRFIPGTLTNPK----------------- 170 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 171 ------------------------YDGYIE----PDVVVVTDPIGDAQAVKEAITVGIPV 202 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N++ VD V+P N+ +++++ L+A+ +D + +Y D +S Sbjct: 203 IAMCDSNNSTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRGAEPTYSLDDFES 257 >gi|327401472|ref|YP_004342311.1| 30S ribosomal protein S2 [Archaeoglobus veneficus SNP6] gi|327316980|gb|AEA47596.1| ribosomal protein S2 [Archaeoglobus veneficus SNP6] Length = 205 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 50/220 (22%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV G + + M ++I+ R + +++D+ Q ++ A + +S Sbjct: 17 ISPDEYLAAGVHIGTQVKTGD--MRKFIYKVRPDGLYVLDIRQLDERIKIAGKFLSR--F 72 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL VA + AK C+ +++ G +TN LR+ E Sbjct: 73 EPAKILVVAARQYGQKPAKMFAKVVGADCIVGRFVPGTLTNPM--------LREYRE--- 121 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + A+QEA + IP+ Sbjct: 122 ----------------------------------PDVVIVTDPAIDSQAVQEATDIGIPV 147 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VA+ D+N++ VD VIP N+ +++AL L+A + Sbjct: 148 VALCDSNNSAANVDLVIPTNNKGRKALALVYWLLAREILR 187 >gi|288560173|ref|YP_003423659.1| ribosomal protein S2P Rps2p [Methanobrevibacter ruminantium M1] gi|288542883|gb|ADC46767.1| ribosomal protein S2P Rps2p [Methanobrevibacter ruminantium M1] Length = 198 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 91/244 (37%), Gaps = 54/244 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + L +G+ G + + ME+YIF R + +++D+ +T L+ + + Sbjct: 1 MSDLLIPLDNYLAAGLHIGTQQKTHD--MEKYIFRVRSDGLYVLDVRKTDERLRAVAKFL 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + IL VAT+ V + + + + +++ G +TN K + Sbjct: 59 AK--YDPDDILVVATRQYGQAPVKKFGEITGCKTIPGRFIPGTLTNP-----GYAKFIE- 110 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + AI E+++ Sbjct: 111 ---------------------------------------PKVIVVTDPRSDSQAILESKQ 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+V + DT + VD +P N+ ++IAL L+A + R+ +G D Sbjct: 132 NGIPVVGLCDTENLLANVDICVPSNNKGRKAIALIYWLLARQIL----RERGILGEDEDL 187 Query: 240 AGET 243 E Sbjct: 188 DLEP 191 >gi|300711104|ref|YP_003736918.1| 30S ribosomal protein S2 [Halalkalicoccus jeotgali B3] gi|299124787|gb|ADJ15126.1| 30S ribosomal protein S2 [Halalkalicoccus jeotgali B3] Length = 271 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 94/235 (40%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +G G + + MER+I R + +++D+S+T ++ A +S+ Sbjct: 84 IPVEEYLGAGAHIGTQQKTQD--MERFIHRVRTDGLYVLDISKTDERIRTAADFLSN--Y 139 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 ++L +++ + A+ +++ G +TN K Sbjct: 140 DPEQVLVTSSRQYGRFPAEKFAETIGARARTGRFIPGTLTNPK----------------- 182 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A+ EA + IP+ Sbjct: 183 ------------------------YDGYIE----PDVVVVTDPIGDAQAVTEAITVGIPV 214 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N++ VD VIP N+ +++++ L+A+ +D Y D +S Sbjct: 215 IAMCDSNNSTSNVDLVIPTNNKGRKALSVVYWLLANETLDRRGADTVYALEDFES 269 >gi|145590328|ref|YP_001152330.1| 30S ribosomal protein S2 [Pyrobaculum arsenaticum DSM 13514] gi|209573675|sp|A4WH11|RS2_PYRAR RecName: Full=30S ribosomal protein S2P gi|145282096|gb|ABP49678.1| SSU ribosomal protein S2P [Pyrobaculum arsenaticum DSM 13514] Length = 208 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 94/245 (38%), Gaps = 60/245 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMER--YIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV+ G L N +E +IF R + I D+ + L+ A + I+ Sbjct: 13 LEKYLSAGVRLG--TRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAARFIAR--Y 68 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R+L T+ V K + +++ G +TN L +E Sbjct: 69 PPDRVLVHTTRPYGFKPVQMFCKYVGCKALTGRFIPGTLTNPN--------LPHYQEA-- 118 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DL+FVVD + A+ EA ++ +P+ Sbjct: 119 -----------------------------------DLLFVVDPKLDAQAVAEAAKMGVPV 143 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDT++ +D++IP N+ +S+AL ++A RQ + K + Sbjct: 144 IALVDTDTPHQYIDFMIPCNNKGRKSLALIFWILA--------RQVLRERGELKPDQDLP 195 Query: 245 VHSKE 249 V +E Sbjct: 196 VPPEE 200 >gi|66359200|ref|XP_626778.1| 40S ribosomal protein SAe [Cryptosporidium parvum Iowa II] gi|46228372|gb|EAK89271.1| 40S ribosomal protein SAe [Cryptosporidium parvum Iowa II] Length = 260 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 49/214 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I +++ G +N KM Y++ + +I+L++T +Q A ++I+ T+ Sbjct: 16 IAKMIVCKTHIGTKNV--EDKMLSYVYKRTHEGIFLINLAKTWEKIQIAARIIA-TIDNL 72 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ V+ + S ++ A+ + + + ++ G +TN T Sbjct: 73 ADVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFME------------- 119 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + A+ E+ IP++A Sbjct: 120 --------------------------------PRLLIVTDPRVDSQAVIESSYANIPVIA 147 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT+S VD IP N+ SIAL L+A Sbjct: 148 LCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAR 181 >gi|225418688|ref|ZP_03761877.1| hypothetical protein CLOSTASPAR_05912 [Clostridium asparagiforme DSM 15981] gi|225041791|gb|EEG52037.1| hypothetical protein CLOSTASPAR_05912 [Clostridium asparagiforme DSM 15981] Length = 125 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 25/53 (47%), Positives = 37/53 (69%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKA 55 + +++QLLE+GV FGH+ WNPKM YI+ ERN +IIDL ++V + +A Sbjct: 73 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVVKVDEA 125 >gi|156619313|gb|ABU88336.1| ribosomal protein S2 [Chlamydomonas moewusii] Length = 931 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 37/174 (21%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER------------------------------ 37 IRQ++++G+ G + N +M+ YI+ ++ Sbjct: 262 IRQMIQNGMHLGEKAVKCNARMKNYIWFKKQGVVDGRSPEALALLARSASTTVDVASSLT 321 Query: 38 ------NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS-A 90 HII+L +T L KAL ++ +G LF+ TK A+ + A+ S Sbjct: 322 KVPLIKKGNHIINLLKTRRCLNKALTQLTKYALKGSTFLFIGTKKAAAGLIARASLFSKN 381 Query: 91 QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 + VN++WLGG++TNWKT+ +SI K+R + + K +K + R K Sbjct: 382 SFFVNTRWLGGLLTNWKTIRRSISKIRPILQEKQKIVADILEKRKRIKMRLIKK 435 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 9/166 (5%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 ++ + I F+ A++ + +K + + K + K Sbjct: 713 LTHFARQKRVIRFLPRLRHF-KIWENASRFAGASF-KTKIISIVQILMKKIVDPKLKYP- 769 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGL------PDLMFVVDTNREKL 172 ++ + + + ++KK ++K + ++ GI M + ++ +V E Sbjct: 770 VDNIYDSKLGHYSKKIASARKKKWQRFEKYFGGIAKMTEMTKSQISKNVAIIVGQKEEIN 829 Query: 173 AIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 AI+E +++ I + +VDTN NP L D++IP NDDS SI + Sbjct: 830 AIRECKKVGIKMFNIVDTNCNPTLADHIIPANDDSRNSIKFVLNKF 875 >gi|67624811|ref|XP_668688.1| ribosomal protein S2 [Cryptosporidium hominis TU502] gi|75002627|sp|Q5CPC9|RSSA_CRYHO RecName: Full=40S ribosomal protein SA gi|54659892|gb|EAL38453.1| ribosomal protein S2 [Cryptosporidium hominis] gi|323509441|dbj|BAJ77613.1| cgd3_2090 [Cryptosporidium parvum] gi|323510093|dbj|BAJ77940.1| cgd3_2090 [Cryptosporidium parvum] Length = 256 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 49/214 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I +++ G +N KM Y++ + +I+L++T +Q A ++I+ T+ Sbjct: 12 IAKMIVCKTHIGTKNV--EDKMLSYVYKRTHEGIFLINLAKTWEKIQIAARIIA-TIDNL 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ V+ + S ++ A+ + + + ++ G +TN T Sbjct: 69 ADVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFME------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + A+ E+ IP++A Sbjct: 116 --------------------------------PRLLIVTDPRVDSQAVIESSYANIPVIA 143 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT+S VD IP N+ SIAL L+A Sbjct: 144 LCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAR 177 >gi|76802066|ref|YP_327074.1| 30S ribosomal protein S2 [Natronomonas pharaonis DSM 2160] gi|121717528|sp|Q3IQS9|RS2_NATPD RecName: Full=30S ribosomal protein S2P gi|76557931|emb|CAI49515.1| ribosomal protein S2 [Natronomonas pharaonis DSM 2160] Length = 277 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 93/234 (39%), Gaps = 50/234 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + M+R+I R + +++D+SQT ++ A +S+ Sbjct: 90 IPVEDYLAAGVHIGTQQKT--KSMDRFIHRVRTDGLYVLDVSQTDQRIRTAASFLSN--Y 145 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 + +IL +++ + A +++ G +TN Sbjct: 146 QPEQILVASSRQYGRFPAEKFADAVGARARTGRFIPGTLTNPD----------------- 188 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 189 ------------------------YDGYIE----PDVVVVTDPIGDSQAVKEAITVGIPV 220 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +A+ D+N+ VD V+P N+ +++++ L+A+ +D + +Y D + Sbjct: 221 IAMCDSNNTTSNVDLVVPTNNKGRKALSVIYWLLANETLDRRGAEPAYALEDFE 274 >gi|66826691|ref|XP_646700.1| 40S ribosomal protein SA [Dictyostelium discoideum AX4] gi|74858259|sp|Q55BY1|RSSA_DICDI RecName: Full=40S ribosomal protein SA gi|60474571|gb|EAL72508.1| 40S ribosomal protein SA [Dictyostelium discoideum AX4] Length = 245 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 81/221 (36%), Gaps = 49/221 (22%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTH-IIDLSQTVPMLQKALQVISDT 62 Q I ++L G N + +ME Y + ++N H II+L++T +Q A +VI Sbjct: 11 HQDDILKMLACQTHLGGNNV--DVEMESYTWKRKDNGHFIINLAKTWEKIQLAARVIV-A 67 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + I ++ K V++ A + ++ G TN Sbjct: 68 IENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQ---------------- 111 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 I+ P L+ V D +K + EA + I Sbjct: 112 -----------------------------IQSKFTEPRLLIVADPLLDKQPLMEASYVNI 142 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 P +A+ DT S D VD IP N+ SIAL L+A + Sbjct: 143 PTIALCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLAREVL 183 >gi|145537035|ref|XP_001454234.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145553453|ref|XP_001462401.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124421989|emb|CAK86837.1| unnamed protein product [Paramecium tetraurelia] gi|124430240|emb|CAK95028.1| unnamed protein product [Paramecium tetraurelia] Length = 238 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 106/280 (37%), Gaps = 62/280 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + I++L+ S G + +RY+ N +I++L +T ++ A +VI Sbjct: 1 MSRKEQDIKRLIASQCHIG--TKQLHFDQKRYVSHRSDNGAYILNLEETWQHIKLAARVI 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCV-NSKWLGGMMTNWKTVSQSIQKLRD 118 + V + ++ V+++ V++ A + +++W G +TN + K ++ Sbjct: 59 A-AVEQPQDVMVVSSRPIGQRAVIKFAHYTHASSTRSARWTPGTLTNQSN--SASGKFQE 115 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 P L+ V D + +K AI EA Sbjct: 116 ----------------------------------------PQLLIVTDPHLDKQAIVEAS 135 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS--AAIDGIARQHSY---- 232 + IP++A+ ++++ VD IP + ++SI++ L+A + G RQ Sbjct: 136 YVNIPVIALCNSDNPLQYVDIPIPVGNRETKSISMIYWLLAREVKILRGELRQDEEWDVL 195 Query: 233 ---------MGADTKSAGETVVHSKEGMQLEEDSQSSESS 263 A V +G + E ++ ++ Sbjct: 196 VDLFYHKEITNDQLGVADNQVKQEGDGEEQEHQGEAEKAD 235 >gi|148643497|ref|YP_001274010.1| 30S ribosomal protein S2 [Methanobrevibacter smithii ATCC 35061] gi|222445005|ref|ZP_03607520.1| hypothetical protein METSMIALI_00621 [Methanobrevibacter smithii DSM 2375] gi|261350425|ref|ZP_05975842.1| ribosomal protein S2 [Methanobrevibacter smithii DSM 2374] gi|209573669|sp|A5UN64|RS2_METS3 RecName: Full=30S ribosomal protein S2P gi|148552514|gb|ABQ87642.1| ribosomal protein S2p [Methanobrevibacter smithii ATCC 35061] gi|222434570|gb|EEE41735.1| hypothetical protein METSMIALI_00621 [Methanobrevibacter smithii DSM 2375] gi|288861208|gb|EFC93506.1| ribosomal protein S2 [Methanobrevibacter smithii DSM 2374] Length = 198 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 94/240 (39%), Gaps = 50/240 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + L +G+ G + + ME+YIF R + +++D+ +T +++ +++ Sbjct: 1 MSELLIELDNYLAAGLHIGTQQKTSD--MEKYIFRVRSDGLYVLDIQKTDERIRQIAKLL 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + IL VAT+ V + + + + +++ G +TN T ++ I+ Sbjct: 59 AR--YDPEDILVVATRQYGQAPVKKFGEVTGAKTIPGRFIPGTLTN-PTYAKFIE----- 110 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + A+ E+++ Sbjct: 111 ---------------------------------------PKIIVVTDPRSDAQAVLESKQ 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP++A+ DT + VD IP N+ ++IAL L+A + D ++ Sbjct: 132 NGIPVIALCDTENLLSFVDIAIPVNNKGRKAIALVYWLLARQILRERGTIPEDGDLDIEA 191 >gi|209880367|ref|XP_002141623.1| 40S ribosomal protein SA [Cryptosporidium muris RN66] gi|209557229|gb|EEA07274.1| 40S ribosomal protein SA, putative [Cryptosporidium muris RN66] Length = 257 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 101/289 (34%), Gaps = 70/289 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 I +++ G +N KM Y++ + +I+L++T +Q A ++I T+ Sbjct: 12 IAKMIVCKTHIGTKNV--EDKMLSYVYKRTHEGIFLINLAKTWEKIQLAARIIV-TIDNL 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ V+ + S ++ A+ + + + ++ G +TN T Sbjct: 69 ADVVVVSQRPYGSRPALKFAQHTGAHAMVGRFTPGTLTNQITQKFME------------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ V D + A+ E+ IP++A Sbjct: 116 --------------------------------PRLLIVTDPRVDSQAVIESSYANIPVIA 143 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQ--------------- 229 + DT+S VD IP N+ SIAL L+A + G + Sbjct: 144 LCDTDSPLQYVDVAIPCNNKGKESIALMYYLLAREVNFLRGKTDKWEVIVDVFFWRDPEE 203 Query: 230 ---HSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 +S AD + A EG +E + + E S G A + Sbjct: 204 YDNNSAAVADLELADGIGADI-EGPNVEAGASAVEWSGATGNWSAAAAD 251 >gi|297713371|ref|XP_002833160.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] Length = 268 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A I Sbjct: 8 LQMKEENVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAACAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G N Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFANQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P + D + + EA Sbjct: 112 --------------------------------IQAAFREPRPLVFTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + +P + + +T S VD IP N+ + S+ L ++A Sbjct: 140 VNLPTIVLCNTGSPLCYVDIAIPCNNKGAHSVGLMWWMLA 179 >gi|297713369|ref|XP_002833159.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] Length = 283 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 49/220 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A I Sbjct: 8 LQMKEENVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAACAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G N Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFANQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P + D + + EA Sbjct: 112 --------------------------------IQAAFREPRPLVFTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + +P + + +T S VD IP N+ + S+ L ++A Sbjct: 140 VNLPTIVLCNTGSPLCYVDIAIPCNNKGAHSVGLMWWMLA 179 >gi|256066167|ref|XP_002570487.1| ribosomal protein S2 eukaryotic and archaeal form [Schistosoma mansoni] gi|227299159|emb|CAY18007.1| ribosomal protein S2, eukaryotic and archaeal form, putative [Schistosoma mansoni] Length = 301 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 95/283 (33%), Gaps = 64/283 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVI 59 + L +R +L + V G N +M Y+ ++N HII L +T + Sbjct: 30 LELSAEDLRLMLAAHVHVG--ETSMNFQMSTYVHGCTKDNYHIIKLDKTWEKILL-AARA 86 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + ++ V++ A + + ++ G TN K Sbjct: 87 IAAIDHPSNVYAIGSRPFTQRAVLKFANYTGATAMAGRFTPGTFTNQKQ----------- 135 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + R+ P L+ V D + A+ EA Sbjct: 136 -----------------SCFRE-----------------PRLLVVSDPLSDHQAVYEANS 161 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P++A +T+ VD VIP N+ S SIA+ L+A G DT+ Sbjct: 162 VNVPLIAFCNTDVPLSRVDIVIPCNNKSRHSIAVVWWLLAR-------EVRRIRGEDTRL 214 Query: 240 AGETVVHS--------KEGMQLEEDSQSSESSVLDGQEVAVVP 274 +V+ +E EE ++ L G ++ Sbjct: 215 HQWSVLPDLFLYRDPNEEEQNAEEVDEARLEPALPGADIEAAE 257 >gi|256086184|ref|XP_002579284.1| ribosomal protein S2 eukaryotic and archaeal form [Schistosoma mansoni] gi|238664707|emb|CAZ35523.1| ribosomal protein S2, eukaryotic and archaeal form, putative [Schistosoma mansoni] Length = 279 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 95/283 (33%), Gaps = 64/283 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVI 59 + L +R +L + V G N +M Y+ ++N HII L +T + Sbjct: 8 LELSAEDLRLMLAAHVHVG--ETSMNFQMSTYVHGCTKDNYHIIKLDKTWEKILL-AARA 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + ++ V++ A + + ++ G TN K Sbjct: 65 IAAIDHPSNVYAIGSRPFTQRAVLKFANYTGATAMAGRFTPGTFTNQKQ----------- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 + R+ P L+ V D + A+ EA Sbjct: 114 -----------------SCFRE-----------------PRLLVVSDPLSDHQAVYEANS 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + +P++A +T+ VD VIP N+ S SIA+ L+A G DT+ Sbjct: 140 VNVPLIAFCNTDVPLSRVDIVIPCNNKSRHSIAVVWWLLAR-------EVRRIRGEDTRL 192 Query: 240 AGETVVHS--------KEGMQLEEDSQSSESSVLDGQEVAVVP 274 +V+ +E EE ++ L G ++ Sbjct: 193 HQWSVLPDLFLYRDPNEEEQNAEEVDEARLEPALPGADIEAAE 235 >gi|57103666|ref|XP_534299.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) [Canis familiaris] Length = 262 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 53/252 (21%) Query: 29 MERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAK 87 ME+YI+ + + +II+L +T L A + I + + +++++ V++ A Sbjct: 1 MEQYIYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENPADVSVMSSRNTDQRAVLKFAA 59 Query: 88 RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKR 147 + V + G TN Sbjct: 60 ATGATPVAGHFTPGTFTNQ----------------------------------------- 78 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 I+ P L+ V D + EA + +P VA+ +T+S VD IP N+ Sbjct: 79 ----IQAASREPRLLVVTDPRAAHQPLTEASYVNLPPVALCNTDSPLRYVDIAIPCNNKG 134 Query: 208 SRSIALFCDLVASAAID--GIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESS 263 + S+ L ++A + G + D + KE E + + E Sbjct: 135 AHSVGLMWWMLAREVLHMCGTISREHPWEVLPDLYFYRDPEEIEKEEQAAAEKAVTKEE- 193 Query: 264 VLDGQEVAVVPE 275 G+ +A PE Sbjct: 194 -FQGEWMAPAPE 204 >gi|307352918|ref|YP_003893969.1| 30S ribosomal protein S2 [Methanoplanus petrolearius DSM 11571] gi|307156151|gb|ADN35531.1| ribosomal protein S2 [Methanoplanus petrolearius DSM 11571] Length = 203 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L +GV G + + M ++I+ R + +I+D+ QT ++ A + I+ Sbjct: 18 VEDYLAAGVHIGTQQKSQD--MMKFIYRVRGDGLYILDIQQTDDRIKTAAEFIAK--FDP 73 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ V ++ + A +++ GM+TN Q++ + E Sbjct: 74 AKVFVVTSRQYGQYPAKKFADAVGGRSKVGRFIPGMLTN--------QRIPNYVE----- 120 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P+++ V D + AI EA + +P+VA Sbjct: 121 --------------------------------PEVVIVTDPIGDSQAINEAVQCGVPVVA 148 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + DTN+ +D VIP N+ ++++L L+A + Sbjct: 149 LCDTNNITKYIDLVIPTNNKGRKALSLIYYLLAREVL 185 >gi|145549468|ref|XP_001460413.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428243|emb|CAK93016.1| unnamed protein product [Paramecium tetraurelia] Length = 268 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 94/222 (42%), Gaps = 47/222 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + I++L+ S G + M+RY+ N ++I++L +T ++ A +VI Sbjct: 33 MSRKEQDIKRLIASQCHVG--TKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCV-NSKWLGGMMTNWKTVSQSIQKLRD 118 + + + ++ V+++ V++ A + +++W G +TN + K ++ Sbjct: 91 A-AIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSN--SASGKFQE 147 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 P L+ V D + ++ AI EA Sbjct: 148 ----------------------------------------PQLLIVTDPHLDRQAIVEAS 167 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + IP++A+ ++++ VD IP + ++SI++ L+A Sbjct: 168 YVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYWLLAR 209 >gi|84489660|ref|YP_447892.1| 30S ribosomal protein S2 [Methanosphaera stadtmanae DSM 3091] gi|121731100|sp|Q2NG04|RS2_METST RecName: Full=30S ribosomal protein S2P gi|84372979|gb|ABC57249.1| ribosomal protein S2P [Methanosphaera stadtmanae DSM 3091] Length = 198 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 54/244 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + + L +G+ G + + ME+YI+ R + H++D+ + + A +++ Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTKD--MEKYIYRVRADGLHVLDVKSSNDKIIVAAKLL 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 S IL V+T+ V + + + + +++ G +TN + K + Sbjct: 59 SK--YEPDDILVVSTRQYGQSPVKKFGEVTGTKTIPGRFIPGTLTNPQ-----YAKFIE- 110 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + A+ EA++ Sbjct: 111 ---------------------------------------PKILVVTDPRSDSQAVIEAKQ 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 IP+VA+ DT + VD VIP N+ ++IAL L+A + R+ + +D + Sbjct: 132 NGIPVVALCDTENLLCNVDVVIPVNNKGRKAIALVYWLLARQIL----RERGILSSDEEF 187 Query: 240 AGET 243 E Sbjct: 188 DLEP 191 >gi|304314294|ref|YP_003849441.1| 30S ribosomal protein S2P [Methanothermobacter marburgensis str. Marburg] gi|302587753|gb|ADL58128.1| 30S ribosomal protein S2P [Methanothermobacter marburgensis str. Marburg] Length = 198 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 88/221 (39%), Gaps = 50/221 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + + L +G+ G + + ME+YI+ R + +++D+ +T + A + + Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTAD--MEKYIYRVRSDGLYVLDIRKTNDRIIAASKFL 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + IL V+T+ + V + + + + +++ G +TN + K + Sbjct: 59 AK--YEPDDILAVSTRQYGQEPVRKFGEVTGARTIPGRFIPGTLTNP-----NYAKFIE- 110 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ D + AI EA++ Sbjct: 111 ---------------------------------------PQVLVATDPRSDSQAIVEAKQ 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + +P+VA+ DT + VD IP N+ ++IAL L+A Sbjct: 132 IGLPVVALCDTENLLGNVDIAIPVNNKGRKAIALVYWLLAR 172 >gi|261888173|gb|ACY06028.1| ribosomal protein S2 [Volvox carteri f. nagariensis] Length = 974 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 12/124 (9%) Query: 107 KTVSQSIQKLRD------LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP- 159 +T ++K D ++++ +++ TKK + ++K ++++ L GI +M + Sbjct: 820 QTTRFLMKKFVDPKMKYPMDKIYDEKLSKQTKKVAASRKKKWQRIEKYLGGISNMTKIQE 879 Query: 160 -----DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALF 214 ++ ++ E A++E ++L I + +VDTN NP D+ IP NDD+ SI Sbjct: 880 KQIRNNVAIIIGQQEEMNAVRECQKLGIKMFHIVDTNCNPGFADHFIPANDDARNSIKFI 939 Query: 215 CDLV 218 Sbjct: 940 LGKF 943 Score = 98.9 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 47/163 (28%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTH-------------------- 41 +L + ++RQ+L SG+ +G + N +M+ Y++ + Sbjct: 334 SLVRASLRQMLRSGMHYGEKAIKCNARMKSYVWIRKKGLDNKFTVNNSNFNASSVRSKLS 393 Query: 42 --------------------------IIDLSQTVPMLQKALQVISDTVARGGRILFVATK 75 II+L +T L KAL ++ +G LFV TK Sbjct: 394 TLLGQTKSSLQTKTRETRPLIKKGRNIINLLKTRRCLNKALAQLTKYAVKGKTFLFVGTK 453 Query: 76 SQASDCVMEAAKRS-AQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 AS V AA S + VN++WLGGM+TNWKT+ +SI K+R Sbjct: 454 KAASGLVSRAALFSKKAFFVNTRWLGGMLTNWKTILKSISKIR 496 >gi|109131007|ref|XP_001097457.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Macaca mulatta] Length = 295 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 96/280 (34%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKSKSDGLYIINLKRTWEKLLLVARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + G TN Sbjct: 66 I-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGHFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFWEPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA-- 235 + +P +A+ +S VD IP N+ + S+ L ++A + G + Sbjct: 140 VNLPTIALCKRDSPLRYVDTAIPCNNKGAHSVGLMWWMLAQEVLHVRGTISREHPWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E V G+ A PE Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKE--VFQGEWTAPAPE 237 >gi|171184543|ref|YP_001793462.1| 30S ribosomal protein S2 [Thermoproteus neutrophilus V24Sta] gi|209573783|sp|B1YA42|RS2_THENV RecName: Full=30S ribosomal protein S2P gi|170933755|gb|ACB39016.1| ribosomal protein S2 [Thermoproteus neutrophilus V24Sta] Length = 206 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 60/245 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMER--YIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV+ G L N +E +IF R + I D+ + L+ A + I+ Sbjct: 12 LEKYLSAGVRLG--TRLSNRYLEERGFIFAVRPDGLRIFDIKKIDERLKIAAKFIAR--Y 67 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 R+L T+ V K + +++ G +TN L +E+ Sbjct: 68 PPDRVLVHTTRPYGFKPVQMFCKFVGCRALTGRFIPGTLTNPN--------LPHYQEV-- 117 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DL+FVVD + A+ EA ++ IP+ Sbjct: 118 -----------------------------------DLLFVVDPKLDAQAVTEAAKMGIPV 142 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 VA+VDT++ +D ++P N+ +S+AL ++A + + K + Sbjct: 143 VALVDTDTPHQYIDLMVPCNNKGRKSLALIFWILARQILRERG--------ELKPDQDLP 194 Query: 245 VHSKE 249 V +E Sbjct: 195 VPPEE 199 >gi|116753791|ref|YP_842909.1| 30S ribosomal protein S2 [Methanosaeta thermophila PT] gi|121694448|sp|A0B6E5|RS2_METTP RecName: Full=30S ribosomal protein S2P gi|116665242|gb|ABK14269.1| SSU ribosomal protein S2P [Methanosaeta thermophila PT] Length = 206 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 84/225 (37%), Gaps = 50/225 (22%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 I + L +GV G + + M +YI+ R + +++D+ T ++ A + +++ Sbjct: 17 IPIDEYLAAGVHIGTQQKTSD--MMKYIYRVRTDGLYVLDVQATDKRIRLAGKFLAN--Y 72 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL V+ + AK +++ +TN Sbjct: 73 EPSKILVVSARQYGQRPATMFAKAVGARANVGRFIPNTLTNPH----------------- 115 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G + PD++ V D + A++EA + IP+ Sbjct: 116 ------------------------FAGYIE----PDVLLVTDPAGDGQAVKEAVDIGIPV 147 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 VA+ DTN+ VD VIP N+ +++ L L+A + + Sbjct: 148 VALCDTNNMTSNVDLVIPTNNKGRKALTLIYWLLARQVLRERGEE 192 >gi|325958573|ref|YP_004290039.1| 30S ribosomal protein S2 [Methanobacterium sp. AL-21] gi|325330005|gb|ADZ09067.1| ribosomal protein S2 [Methanobacterium sp. AL-21] Length = 198 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 94/240 (39%), Gaps = 50/240 (20%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + + L +G+ G + + MERYI+ R + +++D+ +T + A + + Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTKD--MERYIYRVRADGLYVLDVRKTNDRIVAAGKFL 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 S IL V+T+ V + + + + +++ G +TN + K + Sbjct: 59 SK--YDPEDILVVSTRQYGQAPVKKFGQITGAKTIPGRFIPGTLTNP-----NYAKFIE- 110 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P ++ V D + AI EAR+ Sbjct: 111 ---------------------------------------PKVLVVTDPRSDSQAIIEARQ 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + IP+VA+ DT + VD V+P N+ ++IAL L+A + G +T + Sbjct: 132 IGIPVVALCDTENLLGNVDIVVPVNNKGRKAIALVYWLLARQNLRGRGILKEDEDLETPA 191 >gi|11496554|ref|NP_044567.1| ribosomal protein S2 [Toxoplasma gondii RH] gi|74824912|sp|Q9MTD5|RR2_TOXGO RecName: Full=30S ribosomal protein S2, apicoplast gi|5231257|gb|AAD41151.1|U87145_20 ribosomal protein S2 [Toxoplasma gondii] Length = 233 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 84/229 (36%), Gaps = 7/229 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 + + L+ + G K YI+ + NN H ++ + L KA + Sbjct: 1 MILLKLNSLINIPIYIGSATSYRQKKFINYIYKKYNNKHFFNIFIILKYLSKAYLYLYIL 60 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +LF+ + + + + A + + +N + + NW + L+ L++L Sbjct: 61 SKYNRSLLFLNSSIKNFNLIKSLANLTNNFYINFFYKIDFLFNWIMFKNKLILLKWLKQL 120 Query: 123 ----LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 L + + + + G+ M LP +F+ ++ + Sbjct: 121 YTFYLKYLFNYLPYNLLIKLYYIYINILKKFGGLEYMQKLPKNIFICNSYSNY-LYKNLN 179 Query: 179 RLRIPIVAVVDTNSN--PDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 I+++VD N+ + I GN+ S +I +++ +A + G Sbjct: 180 LKNFLIISIVDINNENTLKNISVRIIGNNKSYLAIKFIFNILLTALLHG 228 >gi|11467059|ref|NP_042535.1| ribosomal protein S2 [Acanthamoeba castellanii] gi|1173298|sp|P46753|RT02_ACACA RecName: Full=Ribosomal protein S2, mitochondrial gi|562040|gb|AAD11828.1| ribosomal protein S2 [Acanthamoeba castellanii] Length = 312 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 45/223 (20%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVA 64 T+ QL+ S + G+ WNP+ ++ + NT+I +L+ T + +K + +S+ Sbjct: 6 HITVNQLVASDLFLGYHIANWNPRTNFFLIGKYKNTNIFNLNYTYFLAKKFIVFLSELFV 65 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQY----CVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 G + V + E + + + +NSKW GM++N+K VS Sbjct: 66 NKGHLWLVNENFSLFNRSSELYQLYSLFPEITFLNSKWCKGMLSNYKYVS---------- 115 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 I P +FV + I E+ + Sbjct: 116 -------------------------------IVKPAKFPHSIFVPNIQNNHYVINESFII 144 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 IP +A+VD+ NP V + IPGN S +S+ F ++A + Sbjct: 145 NIPSIAIVDSIDNPSNVFFPIPGNSKSLKSLFFFYMVIAKSLF 187 >gi|119573587|gb|EAW53202.1| hCG1997137, isoform CRA_a [Homo sapiens] Length = 260 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ +++ A + + + G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAMLKFAAATGATPIAGHFTPGTFTNR------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L V D + + E Sbjct: 112 --------------------------------IQAAFREPQLPVVTDPRADHQPLTEVSY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +P +A+ +T+S VD IP N+ + S+ ++A + Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGWMWWMLAQEVLR 184 >gi|282164311|ref|YP_003356696.1| 30S ribosomal protein S2P [Methanocella paludicola SANAE] gi|282156625|dbj|BAI61713.1| 30S ribosomal protein S2P [Methanocella paludicola SANAE] Length = 211 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 50/226 (22%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV G + M+R+I+ RN +++D+ T ++ + + +S Sbjct: 23 IPMDEYLAAGVHIGTQQKT--EDMQRFIYRVRNDGLYVLDVQSTDERIRASAKFLSR--Y 78 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 IL V + AK + +++ G MTN + + + Sbjct: 79 DPANILVVCARQYGQHPAEMFAKAIGASDIVGRFIPGTMTNPEYMFFTE----------- 127 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + A+ EA ++ +P+ Sbjct: 128 ----------------------------------PDVVVVTDPIGDMQAVNEAIKIGVPV 153 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQH 230 +A+ DTN+ +D VIP N+ +++AL L+A + Q Sbjct: 154 IAMCDTNNMTTDIDLVIPTNNKGRKALALVYWLLAREVVRERGEQG 199 >gi|160331578|ref|XP_001712496.1| rsp4 [Hemiselmis andersenii] gi|159765944|gb|ABW98171.1| rsp4 [Hemiselmis andersenii] Length = 206 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 79/218 (36%), Gaps = 49/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARG 66 +++LL V G + M+ YI+ R I +LS+T+ + A + I Sbjct: 12 VKKLLLCNVHLGKKT--CQNLMKIYIWKRRKDGIFIFNLSKTLKKINLAARAIVGI-KNF 68 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ ++ + A VM+ ++ + +W G +TN S + + Sbjct: 69 EEIIAISNDTIAQRAVMKFSQFIGCQMIVGRWTPGKLTN-----HSCKTFSE-------- 115 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + + + E+ + IP +A Sbjct: 116 --------------------------------PQLLILACPQSDLQPLIESSYVNIPTIA 143 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++ S+ VD IPGN+++ S+AL L+ + Sbjct: 144 FCNSESSLKFVDIAIPGNNENKHSVALLWWLLTREVLR 181 >gi|328873762|gb|EGG22128.1| 40S ribosomal protein SA [Dictyostelium fasciculatum] Length = 212 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 72/196 (36%), Gaps = 47/196 (23%) Query: 29 MERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAK 87 ME Y++ + N H+++L++T +Q A +VI + I ++ K +++ A Sbjct: 1 MESYVYKRKDNGVHLLNLAKTWEKIQLAARVIV-AIDNPKDICILSAKPFGQRAILKFAN 59 Query: 88 RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKR 147 + ++ G TN Q K + Sbjct: 60 FVGATAIAGRFTPGTFTN-----QIQAKFTE----------------------------- 85 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 P L+ V D + + + EA + IP +A+ T + D +D IP N+ Sbjct: 86 -----------PRLLIVCDPDVDHQPLVEASYVNIPTIALCTTENKLDGIDIAIPCNNRG 134 Query: 208 SRSIALFCDLVASAAI 223 SIAL L+A + Sbjct: 135 KNSIALMFWLLAREVL 150 >gi|146674796|gb|ABQ42345.1| laminin receptor precursor [Oryctolagus cuniculus] Length = 258 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 83/248 (33%), Gaps = 53/248 (21%) Query: 33 IFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 I+ + + +II+L +T L A + I + + +++++ V++ A + Sbjct: 1 IYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENPADVSVISSRNTGQRAVLKFAAATGA 59 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDG 151 + ++ G TN Sbjct: 60 TPIAGRFTPGTFTNQ--------------------------------------------- 74 Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ Sbjct: 75 IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSV 134 Query: 212 ALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 L ++A + G + D + KE E + + E G Sbjct: 135 GLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQG 192 Query: 268 QEVAVVPE 275 + A PE Sbjct: 193 EWTAPAPE 200 >gi|296110053|ref|YP_003617002.1| ribosomal protein S2 [Methanocaldococcus infernus ME] gi|295434867|gb|ADG14038.1| ribosomal protein S2 [Methanocaldococcus infernus ME] Length = 221 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 54/212 (25%) Query: 12 LESGVQFG--HRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 L +G+ G H+ MER+I+ R + +++D+ +T L+ A + ++ Sbjct: 15 LAAGIHIGTQHKTK----DMERFIYRVRADGLYVLDVRKTDERLRIAAKFLAK--YEPED 68 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 IL V+ + + E K + V +++ G +TN RD E Sbjct: 69 ILAVSRRIYTMGPLEEFGKYTGVRTVIGRFVPGTLTNPA--------YRDFIE------- 113 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 P+++F+ D ++ A++EA + IPIV++ Sbjct: 114 ------------------------------PEVIFISDPRVDRQALREATEIGIPIVSLC 143 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 DT +D VIP N+ +++AL L+ Sbjct: 144 DTEHLTTFIDLVIPTNNKGKKAVALIYYLMTR 175 >gi|296234039|ref|XP_002762266.1| PREDICTED: 40S ribosomal protein SA-like [Callithrix jacchus] Length = 295 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 99/283 (34%), Gaps = 58/283 (20%) Query: 2 ALPQFTIR---QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQ 57 AL + + L +G G N + +ME+YI+ + + +II+L +T L A + Sbjct: 4 ALAVLQMEDVLKFLAAGTHLGSTN--LDFQMEQYIYKRKSDGIYIINLKRTWENLLLAAR 61 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 I + + ++++ V++ A + + ++ G+ TN Sbjct: 62 AIV-AIENPADVSVTSSRNTGQRAVLKFAAATGATPIAGRFTPGIFTNQ----------- 109 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 I+ P L+ V D + + EA Sbjct: 110 ----------------------------------IQAAFREPWLLVVTDPRADHQPLTEA 135 Query: 178 RRLRIPIVAVVDTNSNPDL--VDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 + P + + + +++ L VD +P N+ + S+ L ++A + + S Sbjct: 136 SYVNQPTIPLCNNSADSPLCYVDIAVPCNNKGAHSVGLMWWMLAREVLR-MRGTISCEHP 194 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + ++ + G+ A PE Sbjct: 195 WEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPE 237 >gi|114657132|ref|XP_510419.2| PREDICTED: 40S ribosomal protein SA-like isoform 3 [Pan troglodytes] gi|114657134|ref|XP_001170634.1| PREDICTED: similar to laminin receptor 1 isoform 2 [Pan troglodytes] Length = 295 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +MERYI + + HII+L +T L + + I Sbjct: 8 LQMKEEDVLKFLAAGTLLG-GTNL-DFQMERYICKRKSDGIHIINLKRTWEELLLSARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ +++ + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAMLKFVAATGDTPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + A+ EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRDDHQALMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLACKVLHMCGTISCEHLWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A+ PE Sbjct: 200 DLYFYRDPEEIEKEKQAAVEKAVTKEE--FQGEWTALAPE 237 >gi|124486057|ref|YP_001030673.1| 30S ribosomal protein S2 [Methanocorpusculum labreanum Z] gi|209573662|sp|A2SSV0|RS2_METLZ RecName: Full=30S ribosomal protein S2P gi|124363598|gb|ABN07406.1| ribosomal protein S2 [Methanocorpusculum labreanum Z] Length = 202 Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 82/218 (37%), Gaps = 50/218 (22%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDT 62 P ++ + L +GV G + + M+ +I+ R + +IID+ +T +++ + ++ Sbjct: 13 PLVSVEEYLAAGVHIGTQQK--DNDMKDFIYRVRSDGLYIIDIRKTDERIKQVAKFLAR- 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +I V ++ + A +++ G +TN KL E Sbjct: 70 -YEPAKIFVVTSRQYGQYPAQKFADTIGALSHVGRFIPGTLTNP--------KLPKYVE- 119 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 P ++ V D + I EA + + Sbjct: 120 ------------------------------------PSVVIVTDPIGDAQVITEAVQCGM 143 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 P++A+ D N+ + VD VIP N+ +++++ L+ Sbjct: 144 PVIALCDINNRTNNVDLVIPTNNKGRKALSMVYFLLTK 181 >gi|15678073|ref|NP_275187.1| 30S ribosomal protein S2 [Methanothermobacter thermautotrophicus str. Delta H] gi|3122812|sp|O26150|RS2_METTH RecName: Full=30S ribosomal protein S2P gi|2621079|gb|AAB84551.1| ribosomal protein Sa (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 198 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 50/221 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + + L +G+ G + + ME+YI+ R + +++D+ +T + A + + Sbjct: 1 MSELLIPLDKYLAAGLHIGTQQKTAD--MEKYIYRVRSDGLYVLDIRKTNDRVIAASKFL 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 S IL V+T+ + V + + + + +++ G +TN + K + Sbjct: 59 SK--YEPDDILAVSTRQYGQEPVRKFGEVTGARTIPGRFIPGTLTNP-----NYAKFIE- 110 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P+++ D + AI EA++ Sbjct: 111 ---------------------------------------PEVLVATDPRSDSQAIIEAKQ 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + IP+VA+ DT + VD IP N+ ++IAL L+A Sbjct: 132 IGIPVVALCDTENLLGNVDIAIPVNNKGRKAIALVYWLLAR 172 >gi|15922383|ref|NP_378052.1| 30S ribosomal protein S2 [Sulfolobus tokodaii str. 7] gi|20978670|sp|Q96YW5|RS2_SULTO RecName: Full=30S ribosomal protein S2P gi|15623172|dbj|BAB67161.1| 225aa long hypothetical 30S ribosomal protein S2 [Sulfolobus tokodaii str. 7] Length = 225 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 86/218 (39%), Gaps = 50/218 (22%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G ME++++ R +++D+ + L+ A + +S IL Sbjct: 37 LSAGVHIGTHT--CTKYMEKFVYRVRPEGLYVLDVRKIDERLRIAARFLSRFTPEN--IL 92 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V ++ A V + A+ + ++ G++TN + L + E Sbjct: 93 AVTSRPYAFTPVTKFAEVIRGRAIVGRFPPGILTNPQ--------LPNHIE--------- 135 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 P+++ D + AI+EA ++ IP+VA DT Sbjct: 136 ----------------------------PEVIVATDPRTDLQAIKEASKVGIPVVAFADT 167 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 ++ D VD++IP N+ +S+AL ++A + Sbjct: 168 DAKVDFVDFIIPANNKGRKSLALLYWVLARQILRERRE 205 >gi|41179034|ref|NP_958390.1| ribosomal protein S2 [Chlamydomonas reinhardtii] gi|32699674|sp|Q8HUH1|RR2B_CHLRE RecName: Full=Putative 30S ribosomal S2-like protein gi|23307785|gb|AAN17820.1| ribosomal protein S2 [Chlamydomonas reinhardtii] gi|28269757|tpg|DAA00935.1| TPA_inf: ribosomal protein S2 [Chlamydomonas reinhardtii] Length = 208 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 13/135 (9%) Query: 97 KWLGGMMTNW-KTVSQSIQKLRD------LEELLNKENQGFTKKERLNIERKRDKLKRAL 149 ++L +T +T ++K D ++ + +K+ +KK + ++K +L++ L Sbjct: 53 RYLPTPVTKIEQTARFLVKKFVDPKMKYPMDSIYDKKLSRQSKKVAASRKKKWQRLEKYL 112 Query: 150 DGIRDMGGLP------DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPG 203 GI +M + ++ ++ E A++E ++L I + +VDTN NP L D+ IP Sbjct: 113 GGISNMTKIKEKQIANNVAIIIGQQEEMNAVRECQKLGIKMFHIVDTNCNPGLADHFIPA 172 Query: 204 NDDSSRSIALFCDLV 218 NDD+ SI Sbjct: 173 NDDARNSIKFILGKF 187 >gi|222480238|ref|YP_002566475.1| ribosomal protein S2 [Halorubrum lacusprofundi ATCC 49239] gi|222453140|gb|ACM57405.1| ribosomal protein S2 [Halorubrum lacusprofundi ATCC 49239] Length = 268 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 50/216 (23%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + + MER+I R+ +++D+S T ++ A + + Sbjct: 81 IPVEDYLSAGVHIGTQQKTKD--MERFIHRVRDDGLYVLDVSTTDQRIRTAADFLKN--Y 136 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A +++ G +TN Sbjct: 137 NPEQILVTSSRQYGRFPAEKFADAIGARARTGRFIPGTLTNPD----------------- 179 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G + PD++ V D + A++EA + IP+ Sbjct: 180 ------------------------YAGYIE----PDVVVVTDPIGDAQAVKEAITVGIPV 211 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +A+ D+N+ VD VIP N+ R++++ L+A+ Sbjct: 212 IAMCDSNNQLSNVDLVIPTNNKGRRALSVVYWLLAN 247 >gi|114657136|ref|XP_001170592.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 1 [Pan troglodytes] Length = 267 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 55/280 (19%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +MERYI + + HII+L +T L + + I Sbjct: 8 LQMKEEDVLKFLAAGTLLG-GTNL-DFQMERYICKRKSDGIHIINLKRTWEELLLSARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ +++ + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAMLKFVAATGDTPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + A+ EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRDDHQALMEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID--GIARQHSYMGA-- 235 + +P +A+ +T+S VD IP N+ + S+ L ++A + G Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLACKVLHMCGTISCEHLWEVMP 199 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A+ PE Sbjct: 200 DLYFYRDPEEIEKEKQAAVEKAVTKEE--FQGEWTALAPE 237 >gi|261402674|ref|YP_003246898.1| ribosomal protein S2 [Methanocaldococcus vulcanius M7] gi|261369667|gb|ACX72416.1| ribosomal protein S2 [Methanocaldococcus vulcanius M7] Length = 223 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 82/210 (39%), Gaps = 50/210 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L SG+ G + + MER+I+ R + +++D+ +T L+ A + ++ IL Sbjct: 15 LASGIHIGTQQKTKD--MERFIYRVRSDGLYVLDVRKTDERLRIAAKFLAR--YEPEDIL 70 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V+ + + E K + V +++ G +TN Sbjct: 71 AVSRRIYTMGPLEEFGKYTGIRTVVGRFVPGTLTNPS----------------------- 107 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 I P+++F+ D ++ A++EA + +PIV + DT Sbjct: 108 -----------------YKGFIE-----PEVVFISDPRVDRQALKEATEIGVPIVGLCDT 145 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +D VIP N+ +++AL L+ Sbjct: 146 EHLTSFIDLVIPTNNKGKKAVALIYYLLTR 175 >gi|269859696|ref|XP_002649572.1| SSU ribosomal protein S2P [Enterocytozoon bieneusi H348] gi|269969649|sp|B7XHU4|RSSA_ENTBH RecName: Full=40S ribosomal protein S0 gi|220066935|gb|EED44404.1| SSU ribosomal protein S2P [Enterocytozoon bieneusi H348] Length = 240 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 86/258 (33%), Gaps = 52/258 (20%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61 +P + LL + G + P M++YI+ ER + + DL +T A + Sbjct: 8 MPPVFGKLLLATQAHLG-GVKVTKP-MKKYIYGERQDKVSVFDLKKTWDKFILAARAFCG 65 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 G + ++ K+ V++ A+ + +++ G TN T+ S + Sbjct: 66 L-NYGDDVTVISCKTFGKKPVLKFAETTGAKSYTGRFIPGSFTN-TTIRNSCE------- 116 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 P L+ V D +K AI+EA ++ Sbjct: 117 -------------------------------------PRLIIVSDPIVDKQAIEEAAKVN 139 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIA---LFCDLVASAAIDGIARQHSYMGADTK 238 P +A +T+ + VD IP N+ S ++I + G + Sbjct: 140 CPTIAFCNTDCDLKYVDIAIPLNNRSPKAIGASFFILSRIIRYIKFGTPMDQDIKEVELF 199 Query: 239 SAGETVVHSKEGMQLEED 256 + + K ED Sbjct: 200 FYRDPIELEKLQEDQNED 217 >gi|261601687|gb|ACX91290.1| ribosomal protein S2 [Sulfolobus solfataricus 98/2] Length = 226 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 50/214 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G ME +++ R +++D+ + L+ A + +S I+ Sbjct: 38 LSAGVHIG--THSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSR--YDPQDII 93 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA++ A V + A+ + + + G TN Sbjct: 94 VVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTN------------------------- 128 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 L ++ P ++ V D + AI+EA ++ IPIVA DT Sbjct: 129 ------------PYLSTYIE--------PKVLLVSDPRTDTQAIKEAAKVGIPIVAFADT 168 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++ D +D +IP N+ +S+AL +A + Sbjct: 169 DAKIDYIDLIIPANNKGRKSLALLYWALARQILR 202 >gi|15897033|ref|NP_341638.1| 30S ribosomal protein S2 [Sulfolobus solfataricus P2] gi|284173377|ref|ZP_06387346.1| 30S ribosomal protein S2 [Sulfolobus solfataricus 98/2] gi|2500394|sp|P95993|RS2_SULSO RecName: Full=30S ribosomal protein S2P gi|1707827|emb|CAA69535.1| orf c05004 [Sulfolobus solfataricus P2] gi|13813198|gb|AAK40428.1| SSU ribosomal protein S2AB (rps2AB) [Sulfolobus solfataricus P2] Length = 231 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 50/214 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G ME +++ R +++D+ + L+ A + +S I+ Sbjct: 43 LSAGVHIG--THSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSR--YDPQDII 98 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 VA++ A V + A+ + + + G TN Sbjct: 99 VVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTN------------------------- 133 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 L ++ P ++ V D + AI+EA ++ IPIVA DT Sbjct: 134 ------------PYLSTYIE--------PKVLLVSDPRTDTQAIKEAAKVGIPIVAFADT 173 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++ D +D +IP N+ +S+AL +A + Sbjct: 174 DAKIDYIDLIIPANNKGRKSLALLYWALARQILR 207 >gi|150401188|ref|YP_001324954.1| 30S ribosomal protein S2 [Methanococcus aeolicus Nankai-3] gi|209573659|sp|A6UV20|RS2_META3 RecName: Full=30S ribosomal protein S2P gi|150013891|gb|ABR56342.1| ribosomal protein S2 [Methanococcus aeolicus Nankai-3] Length = 220 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 97/248 (39%), Gaps = 54/248 (21%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L SG+ G + M+R+I+ R + +++D+ +T + A + +S Sbjct: 9 TLDTYLASGIHIGTQQKT--EDMKRFIYRVRADGLYVLDVRKTDERIGLAAKFLSK--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 IL V+ + + + + + + +++ G +TN + Sbjct: 65 PEEILAVSRRIYSVGPLKKFGQTTGITTAAGRFVPGTLTNPSS----------------- 107 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 ++ L+ P+++F+ D ++ A++EA + IPIV Sbjct: 108 --------------------RKFLE--------PEVLFLSDPRIDRQALKEAIEIGIPIV 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 + DT +D++IP N+ +S++L L+A + +G D E + Sbjct: 140 GMCDTEHLTSFIDFIIPTNNKGRKSVSLVYYLIAR----EYMKNRGLIGEDVPFTYEEFL 195 Query: 246 HSKEGMQL 253 +++ Sbjct: 196 EKAMSVKV 203 >gi|297711023|ref|XP_002832156.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Pongo abelii] gi|297711025|ref|XP_002832157.1| PREDICTED: 40S ribosomal protein SA-like isoform 2 [Pongo abelii] Length = 233 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 89/251 (35%), Gaps = 51/251 (20%) Query: 29 MERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAK 87 ME+YI+ + + +II+L +T L A + I + + +++++ V++ A Sbjct: 1 MEQYIYKRKSDGFYIINLKRTWKKLLLAARAIV-AIENSADVSVISSRNTGQRAVLKFAA 59 Query: 88 RSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKR 147 + + + G TN Sbjct: 60 ATGATPIAGHFTPGTFTNQ----------------------------------------- 78 Query: 148 ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 I+ P L+ V D + EA + +P +A+ +T+S VD IP N+ Sbjct: 79 ----IQAAFREPQLLVVTDPRAGHQPLTEASYVNLPTIALCNTDSPLHYVDIAIPCNNKG 134 Query: 208 SRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLD- 266 + S+ L ++A + + S+ E ++ EE + + ++ + Sbjct: 135 AHSVGLMWWMLAREVLR-MRGTISHEHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE 193 Query: 267 --GQEVAVVPE 275 G+ A+ PE Sbjct: 194 FQGEWTALAPE 204 >gi|134045942|ref|YP_001097428.1| 30S ribosomal protein S2 [Methanococcus maripaludis C5] gi|209573663|sp|A4FYC9|RS2_METM5 RecName: Full=30S ribosomal protein S2P gi|132663567|gb|ABO35213.1| SSU ribosomal protein S2P [Methanococcus maripaludis C5] Length = 220 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 87/215 (40%), Gaps = 50/215 (23%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L SG+ G + M R+I+ R + +++D+ +T L+ A + +S+ Sbjct: 9 TLDTYLASGIHIGTQQKT--EDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSN--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 I+ V + + + E K + V +++ G +TN +K + Sbjct: 65 PEDIMAVTRRVYSVGPLKEFGKVTGINTVAGRFVPGTLTNPS-----AKKFAE------- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P+++F+ D +K A++EA + IP++ Sbjct: 113 ---------------------------------PEVLFLSDPRVDKQALKEAIEIGIPVI 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT +D++IP N+ +S++L L+A Sbjct: 140 GMCDTEHLTSHIDFIIPTNNKGRKSVSLMYYLIAR 174 >gi|294952420|ref|XP_002787302.1| 40S ribosomal protein S0-A, putative [Perkinsus marinus ATCC 50983] gi|239902231|gb|EER19098.1| 40S ribosomal protein S0-A, putative [Perkinsus marinus ATCC 50983] Length = 225 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 77/210 (36%), Gaps = 49/210 (23%) Query: 47 QTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNW 106 +T L A +V+ T+ I+ V+ + S V++ A V +W G +TN Sbjct: 1 KTWEKLMAAARVMV-TIENPKDIMVVSQRPYGSRAVLKLANFIGATAVAGRWTPGSLTNQ 59 Query: 107 KTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 T K + P L+ V D Sbjct: 60 ITP-----KFTE----------------------------------------PRLLIVTD 74 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + AI+EA IP++A+ DT+S D VD IP N+ SIAL L+A + + Sbjct: 75 PRTDSQAIKEAAYANIPVIALCDTDSPLDFVDIAIPCNNKGKESIALLYYLLAREVL--M 132 Query: 227 ARQHSYMGADTKSAGETVVHSK-EGMQLEE 255 R G + + ++ E ++ +E Sbjct: 133 LRGKIPRGVEWEVMVDSFFWRDPEEIERQE 162 >gi|268323601|emb|CBH37189.1| 30S ribosomal protein S2P [uncultured archaeon] Length = 217 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 91/228 (39%), Gaps = 53/228 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L SGV G + + M+R+I+ R + +++D+ L+ A + +++ IL Sbjct: 18 LASGVHIGTQQKTGD--MKRFIYQARPDGLYLLDIETLDDRLKSAARFLAN--YDPPSIL 73 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V+++ V A+ + + +++ G +TN + + Sbjct: 74 VVSSREYGHHPVSMFAEVTGAAAIVGRFIPGTLTNP-----GCEYFTE------------ 116 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 P ++ V D ++ A++E +PIVA+ DT Sbjct: 117 ----------------------------PAILVVTDPMTDEQALREGVAAGLPIVALCDT 148 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 N++ +D++IP N+ +++A L+A + + + +G + + Sbjct: 149 NNSTSELDFIIPTNNKGRKALATVYWLLAR---EMLRERLRSVGKEEE 193 >gi|313126010|ref|YP_004036280.1| SSU ribosomal protein s2p [Halogeometricum borinquense DSM 11551] gi|312292375|gb|ADQ66835.1| SSU ribosomal protein S2P [Halogeometricum borinquense DSM 11551] Length = 268 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + N MER+I R+ +++D+SQT ++ A + Sbjct: 81 IPVEDYLGAGVHIGTQ-QKTND-MERFIHRVRDDGLYVLDVSQTDSRIRTAADFL--AGY 136 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A +++ G +TN Sbjct: 137 DPEQILVTSSRQYGRFPAKKFADAVGARARTGRFIPGTLTNPD----------------- 179 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G + PD++ V D + A++EA + IP+ Sbjct: 180 ------------------------YAGYIE----PDVVVVTDPIGDSQAVKEAITVGIPV 211 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD V+P N+ R++++ L+A+ +D Y D ++ Sbjct: 212 IAMCDSNNQTSNVDLVVPTNNKGRRALSVVYWLLANETLDRRGTDQVYALEDFEA 266 >gi|119584991|gb|EAW64587.1| ribosomal protein SA, isoform CRA_c [Homo sapiens] Length = 179 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 49/207 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDD 206 + +P +A+ +T+S VD IP N+ Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNK 166 >gi|254167057|ref|ZP_04873910.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|197623913|gb|EDY36475.1| ribosomal protein S2 [Aciduliprofundum boonei T469] Length = 199 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 51/214 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +GV G + N M ++I+ RN +++D+++T ++ A + ++ IL Sbjct: 12 FTAGVHIGTQVR--NKDMMKFIYKVRNDGLYLLDITKTDERIRMAAKFLAR--YDPADIL 67 Query: 71 FVATKSQASDCVMEAAKRSAQYCVN-SKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 V+ + ++ A+ V +++ G +TN Sbjct: 68 VVSQRQYGQKPSIKFAEAIGGAKVMPGRFIPGTLTN------------------------ 103 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KL ++ P ++ + D + A++EA + +IPI+A+ D Sbjct: 104 -------------PKLSNYIE--------PKVILINDPAADTQALKEAVKSKIPIIALCD 142 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 N+ VD +IP N+ R++AL L+A + Sbjct: 143 ANNRTSYVDLIIPTNNKGRRALALIYWLLAREIL 176 >gi|316974753|gb|EFV58229.1| 40S ribosomal protein SA [Trichinella spiralis] Length = 688 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 50/217 (23%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERNN--THIIDLSQTVPMLQKALQVISDTVARG 66 R L + G RN + +ME+Y++ R++ + + +T + V Sbjct: 64 RLFLAAETHIGSRNV--DFQMEQYVWKRRSDGTADVAEAHKTWNKILL-AARAIAAVKNP 120 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + ++++ Q V++ A + ++ G TN Sbjct: 121 AEVCVISSRPQGQRAVLKFASHIGATPIAGRFTPGTFTNQ-------------------- 160 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 I+ P L+ V D + AI EA + IP++A Sbjct: 161 -------------------------IQKAFREPLLLVVCDPRIDHQAITEASYVNIPVIA 195 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 DT+S VD IP N+ ++SI L ++A + Sbjct: 196 FCDTDSPMKFVDIAIPCNNKGAKSIGLLWWMLAREVL 232 >gi|239994187|ref|ZP_04714711.1| ribosomal protein S2 [Alteromonas macleodii ATCC 27126] Length = 84 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 5/89 (5%) Query: 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +FV+D + E +A+ EAR L IP+V VVDTNSNPD VDY+IPGNDD+ R+I L+ D A+ Sbjct: 1 AIFVIDADHEHIAVTEARNLGIPVVGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLDAAAN 60 Query: 221 AAIDGIARQHSYMGADTKSAGETVVHSKE 249 A G + ++ + V + E Sbjct: 61 AINSGR-----ESNLEVQAEQDDFVEAAE 84 >gi|254167656|ref|ZP_04874507.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|289596976|ref|YP_003483672.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|197623465|gb|EDY36029.1| ribosomal protein S2 [Aciduliprofundum boonei T469] gi|289534763|gb|ADD09110.1| ribosomal protein S2 [Aciduliprofundum boonei T469] Length = 199 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 51/214 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 +GV G + N M ++I+ RN +++D+++T ++ A + ++ IL Sbjct: 12 FTAGVHIGTQVR--NKDMMKFIYKVRNDGLYLLDITKTDERIRMAAKFLAR--YDPADIL 67 Query: 71 FVATKSQASDCVMEAAKRSAQYCVN-SKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 V+ + ++ A+ V +++ G +TN Sbjct: 68 VVSQRQYGQKPSIKFAEAIGGAKVMPGRFIPGTLTN------------------------ 103 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 KL ++ P ++ + D + A++EA + +IPI+A+ D Sbjct: 104 -------------PKLSNYIE--------PKVILINDPAADTQALKEAVKSKIPIIALCD 142 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 N+ VD +IP N+ R++AL L+A + Sbjct: 143 ANNRTSYVDLIIPTNNKGRRALALIYWLLAREIL 176 >gi|292656891|ref|YP_003536788.1| 30S ribosomal protein S2 [Haloferax volcanii DS2] gi|291370311|gb|ADE02538.1| ribosomal protein S2 [Haloferax volcanii DS2] Length = 260 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 90/235 (38%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + + M R+I R+ +++D+SQT ++ A +++ Sbjct: 73 IPVEDYLAAGVHIGTQQKTKD--MVRFIHRVRDDGLYVLDVSQTDSRIRTAADFLAN--Y 128 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A +++ G +TN Sbjct: 129 SPEQILVTSSRQYGRFPAEKFADAVGARARTGRFIPGTLTNPD----------------- 171 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G + PD++ V D + A++EA + IP+ Sbjct: 172 ------------------------YAGYIE----PDVVVVTDPIGDAQAVKEAITVGIPV 203 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD V+P N+ R++++ L+A+ +D Y D ++ Sbjct: 204 IAMCDSNNQTSNVDLVVPTNNKGRRALSVVYWLLANETLDRRGSDTVYALEDFEA 258 >gi|56808418|ref|ZP_00366167.1| COG0052: Ribosomal protein S2 [Streptococcus pyogenes M49 591] Length = 128 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 44/124 (35%), Positives = 83/124 (66%) Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 KKE + ++R +L++ L GI DM +PD+M+VVD ++E++A++EA++L IP+VA+VDT Sbjct: 3 PKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVAMVDT 62 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEG 250 N++PD +D +IP NDD+ R++ L +A A I+G + + + + + +++ E Sbjct: 63 NADPDDIDIIIPANDDAIRAVKLITAKLADAIIEGRQGEDADIAFEADTQADSIEEIVEV 122 Query: 251 MQLE 254 ++ + Sbjct: 123 VEGD 126 >gi|15669172|ref|NP_247977.1| 30S ribosomal protein S2 [Methanocaldococcus jannaschii DSM 2661] gi|3334488|sp|P54109|RS2_METJA RecName: Full=30S ribosomal protein S2P gi|2826355|gb|AAB98985.1| SSU ribosomal protein S2P [Methanocaldococcus jannaschii DSM 2661] Length = 222 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 84/210 (40%), Gaps = 50/210 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L SG+ G + + ME++I+ R + +++D+ +T L+ A + ++ IL Sbjct: 14 LASGIHIGTQQKTKD--MEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLAR--YEPEDIL 69 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V+ + + E K + V +++ G +TN Sbjct: 70 AVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNP------------------------ 105 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 A G + P+++F+ D ++ A++EA + +PIV + DT Sbjct: 106 -----------------AYKGFME----PEVVFISDPRVDRQALKEATEIGVPIVGLCDT 144 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +D VIP N+ +++AL L+ Sbjct: 145 EHLTSFIDLVIPTNNKGKKAVALIYYLLTR 174 >gi|227828312|ref|YP_002830092.1| 30S ribosomal protein S2 [Sulfolobus islandicus M.14.25] gi|229585542|ref|YP_002844044.1| 30S ribosomal protein S2 [Sulfolobus islandicus M.16.27] gi|238620504|ref|YP_002915330.1| 30S ribosomal protein S2 [Sulfolobus islandicus M.16.4] gi|227460108|gb|ACP38794.1| ribosomal protein S2 [Sulfolobus islandicus M.14.25] gi|228020592|gb|ACP55999.1| ribosomal protein S2 [Sulfolobus islandicus M.16.27] gi|238381574|gb|ACR42662.1| ribosomal protein S2 [Sulfolobus islandicus M.16.4] gi|323475382|gb|ADX85988.1| ribosomal protein S2 [Sulfolobus islandicus REY15A] gi|323478107|gb|ADX83345.1| ribosomal protein S2 [Sulfolobus islandicus HVE10/4] Length = 229 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L +GV G ME +++ R +++D+ + L+ A + +S Sbjct: 37 VETYLSAGVHIG--THSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSR--YEP 92 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ VA++ A V + A+ + + + G TN Sbjct: 93 QDIIAVASRPYAYRPVQKFAEVVGARALVGRIIPGTFTN--------------------- 131 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L P ++ V D + AI+EA ++ IPIVA Sbjct: 132 ----------------PYLSTY--------TEPKVLLVSDPRTDTQAIKEAAKVGIPIVA 167 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT++ D +D +IP N+ +S+AL +A + Sbjct: 168 FADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILR 205 >gi|227831070|ref|YP_002832850.1| 30S ribosomal protein S2 [Sulfolobus islandicus L.S.2.15] gi|229579951|ref|YP_002838350.1| 30S ribosomal protein S2 [Sulfolobus islandicus Y.G.57.14] gi|229581388|ref|YP_002839787.1| 30S ribosomal protein S2 [Sulfolobus islandicus Y.N.15.51] gi|284998566|ref|YP_003420334.1| hypothetical protein LD85_2320 [Sulfolobus islandicus L.D.8.5] gi|227457518|gb|ACP36205.1| ribosomal protein S2 [Sulfolobus islandicus L.S.2.15] gi|228010666|gb|ACP46428.1| ribosomal protein S2 [Sulfolobus islandicus Y.G.57.14] gi|228012104|gb|ACP47865.1| ribosomal protein S2 [Sulfolobus islandicus Y.N.15.51] gi|284446462|gb|ADB87964.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5] Length = 229 Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 50/218 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + L +GV G ME +++ R +++D+ + L+ A + +S Sbjct: 37 VETYLSAGVHIG--THSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSR--YEP 92 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 I+ VA++ A V + A+ + + + G TN Sbjct: 93 QDIIAVASRPYAYRPVQKFAEVVGARALVGRIIPGTFTN--------------------- 131 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 L P ++ V D + AI+EA ++ IPIVA Sbjct: 132 ----------------PYLSTY--------TEPKVLLVSDPRTDTQAIKEAAKVGIPIVA 167 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 DT++ D +D +IP N+ +S+AL +A + Sbjct: 168 FADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILR 205 >gi|2129246|pir||F64422 ribosomal protein HS2 homolog - Methanococcus jannaschii Length = 225 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 84/210 (40%), Gaps = 50/210 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L SG+ G + + ME++I+ R + +++D+ +T L+ A + ++ IL Sbjct: 17 LASGIHIGTQQKTKD--MEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLAR--YEPEDIL 72 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V+ + + E K + V +++ G +TN Sbjct: 73 AVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNP------------------------ 108 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 A G + P+++F+ D ++ A++EA + +PIV + DT Sbjct: 109 -----------------AYKGFME----PEVVFISDPRVDRQALKEATEIGVPIVGLCDT 147 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +D VIP N+ +++AL L+ Sbjct: 148 EHLTSFIDLVIPTNNKGKKAVALIYYLLTR 177 >gi|312137116|ref|YP_004004453.1| SSU ribosomal protein s2p [Methanothermus fervidus DSM 2088] gi|311224835|gb|ADP77691.1| SSU ribosomal protein S2P [Methanothermus fervidus DSM 2088] Length = 198 Score = 98.5 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 83/221 (37%), Gaps = 50/221 (22%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 M+ + L +G+ G + + MERYI+ R + +I+D+ +T ++ A + + Sbjct: 1 MSELLIPLDNYLAAGIHIGTQQKTAD--MERYIYRVRSDGLYILDVRKTDERIRIAAKFL 58 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + IL V+ + V + + + + +++ G +TN Sbjct: 59 AK--YEPHDILAVSVRQYGQPAVKKFGEITGAKAIPGRFIPGTLTNP------------- 103 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 LD + P+++ V D + A+ E++ Sbjct: 104 ----------------------------NLDSFVE----PEVLVVTDPRADSQALTESKE 131 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + IP VA D+ + VD IP N+ +S+A L+ Sbjct: 132 IGIPTVAFCDSENLLGNVDIAIPANNKGRKSLATLYWLLTR 172 >gi|297619439|ref|YP_003707544.1| 30S ribosomal protein S2 [Methanococcus voltae A3] gi|297378416|gb|ADI36571.1| ribosomal protein S2 [Methanococcus voltae A3] Length = 218 Score = 98.5 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 88/215 (40%), Gaps = 50/215 (23%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ L SG+ G + M R+I+ R + +++D+ +T L+ A + +S+ Sbjct: 9 SLDTYLASGIHIGTQQKT--EDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSN--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +IL V+ + + + K + + +++ G +TN +K + Sbjct: 65 PEQILAVSRRVYTVGPLEKFGKTTGIKTLAGRFVPGTLTNPA-----SRKFME------- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P+++F+ D +K A++EA + IPIV Sbjct: 113 ---------------------------------PEVLFLSDPRVDKQALKEAIEIGIPIV 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT +D++IP N+ +S++L L+A Sbjct: 140 GMCDTEHLTSHIDFIIPTNNKGRKSVSLMYYLIAR 174 >gi|149039192|gb|EDL93412.1| mitochondrial ribosomal protein S2 (predicted), isoform CRA_a [Rattus norvegicus] Length = 170 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 30/76 (39%), Positives = 38/76 (50%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 76 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 135 Query: 66 GGRILFVATKSQASDC 81 G ILFV+ Q S Sbjct: 136 KGIILFVSRNRQFSHL 151 >gi|148676436|gb|EDL08383.1| mitochondrial ribosomal protein S2, isoform CRA_b [Mus musculus] Length = 211 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 30/76 (39%), Positives = 38/76 (50%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 F+++ L E+ V GH+ + ME YIF R IIDL QT LQ AL + R Sbjct: 122 FSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYR 181 Query: 66 GGRILFVATKSQASDC 81 G ILFV+ Q S Sbjct: 182 KGIILFVSRNRQFSHL 197 >gi|45358230|ref|NP_987787.1| 30S ribosomal protein S2 [Methanococcus maripaludis S2] gi|74572192|sp|Q6LZG2|RS2_METMP RecName: Full=30S ribosomal protein S2P gi|44920987|emb|CAF30223.1| SSU Ribosomal protein S2 [Methanococcus maripaludis S2] Length = 220 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 87/215 (40%), Gaps = 50/215 (23%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L SG+ G + M R+I+ R + +++D+ +T L+ A + +S+ Sbjct: 9 TLDTYLASGIHIGTQQKT--EDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSN--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 I+ V + + + E K + V +++ G +TN +K + Sbjct: 65 PEDIMAVTRRVYSVGPLKEFGKVTGINTVAGRFVPGTLTNPS-----ARKFAE------- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P+++F+ D +K A++EA + IP++ Sbjct: 113 ---------------------------------PEVLFLSDPRVDKQALKEAIEIGIPVI 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT +D++IP N+ +S++L L+A Sbjct: 140 GMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLIAR 174 >gi|154151754|ref|YP_001405372.1| 30S ribosomal protein S2 [Candidatus Methanoregula boonei 6A8] gi|209573660|sp|A7IAG8|RS2_METB6 RecName: Full=30S ribosomal protein S2P gi|154000306|gb|ABS56729.1| ribosomal protein S2 [Methanoregula boonei 6A8] Length = 203 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 90/238 (37%), Gaps = 52/238 (21%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDT 62 P + + L +GV G + M+++I+ R + +I+D+ +T ++ + ++ Sbjct: 14 PLIPVEEYLAAGVHIGTQQKS--EDMKKFIYRVRGDGLYILDIRETDARIKTVAKFLTQ- 70 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 IL V ++ + A +++ G++TN Sbjct: 71 -YEAPEILVVTSRQYGQYPAKKFADTIGAMSATGRFIPGLLTNPV--------------- 114 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 LDG + P ++ V D + I EA + I Sbjct: 115 --------------------------LDGYIE----PKVIVVTDPIGDAQVINEAVQCGI 144 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSYMGADTK 238 P+VA+ DTN+ VD VIP N+ +++++ L+ I GIA + +T+ Sbjct: 145 PVVALCDTNNMTKFVDLVIPTNNKGRKALSMIYFLLTREMLRIRGIATSLTQEDFETE 202 >gi|257053578|ref|YP_003131411.1| 30S ribosomal protein S2 [Halorhabdus utahensis DSM 12940] gi|256692341|gb|ACV12678.1| ribosomal protein S2 [Halorhabdus utahensis DSM 12940] Length = 267 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 94/235 (40%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + + M+R+I R + +++D+S T ++ A +++ Sbjct: 80 IPVDDYLSAGVHIGTQQKTSD--MDRFIHRVRTDGLYVLDVSMTDQRIRTAADFLAN--Y 135 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A +++ G +TN Sbjct: 136 EPEQILVASSRQYGRFPAEKFADAVGARARTGRFIPGTLTNPD----------------- 178 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 179 ------------------------YDGYIE----PDVVVVTDPIGDAQAVKEAITVGIPV 210 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD ++P N+ +++++ L+A+ +D + +Y +D +S Sbjct: 211 IAMCDSNNTTGNVDLIVPTNNKGRKALSVVYWLLANETLDRRGAKPAYSLSDFES 265 >gi|159904610|ref|YP_001548272.1| 30S ribosomal protein S2 [Methanococcus maripaludis C6] gi|209573664|sp|A9A7B6|RS2_METM6 RecName: Full=30S ribosomal protein S2P gi|159886103|gb|ABX01040.1| ribosomal protein S2 [Methanococcus maripaludis C6] Length = 221 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 50/215 (23%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L SG+ G + M R+I+ R + +++D+ +T L+ A + +S+ Sbjct: 9 TLDTYLASGIHIGTQQKT--EDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSN--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 I+ V + + + + + + V +++ G +TN +K + Sbjct: 65 PEDIMAVTRRVYSVGPLKKFGQVTGINTVAGRFVPGTLTNPS-----AKKFAE------- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P+++F+ D +K A++EA + IP+V Sbjct: 113 ---------------------------------PEVLFLSDPRVDKQALKEAIEIGIPVV 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT +D++IP N+ +S++L L+A Sbjct: 140 GMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLIAR 174 >gi|150403606|ref|YP_001330900.1| 30S ribosomal protein S2 [Methanococcus maripaludis C7] gi|209573665|sp|A6VJX3|RS2_METM7 RecName: Full=30S ribosomal protein S2P gi|150034636|gb|ABR66749.1| ribosomal protein S2 [Methanococcus maripaludis C7] Length = 221 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 50/215 (23%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 T+ L SG+ G + M R+I+ R + +++D+ +T L+ A + +S+ Sbjct: 9 TLDTYLASGIHIGTQQKT--EDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSN--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 I+ V + + + + + + V +++ G +TN +K + Sbjct: 65 PEDIMAVTRRVYSVGPLKKFGQVTGINTVAGRFVPGTLTNPS-----AKKFAE------- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P+++F+ D +K A++EA + IP+V Sbjct: 113 ---------------------------------PEVLFLSDPRVDKQALKEAIEIGIPVV 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + DT +D++IP N+ +S++L L+A Sbjct: 140 GMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLIAR 174 >gi|21227862|ref|NP_633784.1| 30S ribosomal protein S2 [Methanosarcina mazei Go1] gi|23822119|sp|Q8PW41|RS2_METMA RecName: Full=30S ribosomal protein S2P gi|20906276|gb|AAM31456.1| SSU ribosomal protein S2P [Methanosarcina mazei Go1] Length = 224 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 87/216 (40%), Gaps = 50/216 (23%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 +I + L +GV G + + M R+++ R + +++D+ T ++ A +++S Sbjct: 37 VSIDEYLAAGVHIGTQQKTQD--MMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSH--Y 92 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RIL V+++ ++ + +++ G +TN + + + Sbjct: 93 DPSRILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQ-IHGFFE---------- 141 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + ++EA + +P+ Sbjct: 142 ----------------------------------PDVIIVTDPAGDAQVLKEASSIGVPV 167 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +A+ DTN+ VD VIP N+ ++++L L+A Sbjct: 168 IALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAR 203 >gi|215259533|gb|ACJ64258.1| 40S ribosomal protein SA [Culex tarsalis] Length = 257 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 68/194 (35%), Gaps = 47/194 (24%) Query: 32 YIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSA 90 Y+F R + HII+L +T L A + I+ G + ++++ V++ A + Sbjct: 2 YVFKRRPDGVHIINLGRTWEKLLLAARCIASI-EYPGEVFAISSRQFGQRAVLKFAHYTE 60 Query: 91 QYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALD 150 + ++ G TN Sbjct: 61 ATPIAGRFTPGAFTNQ-------------------------------------------- 76 Query: 151 GIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 I+ P L+ V D + + EA + IP++A +T+S VD IP N S S Sbjct: 77 -IQPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNTKSPHS 135 Query: 211 IALFCDLVASAAID 224 I L L+A + Sbjct: 136 IGLMWWLLAREVLR 149 >gi|307594860|ref|YP_003901177.1| 30S ribosomal protein S2 [Vulcanisaeta distributa DSM 14429] gi|307550061|gb|ADN50126.1| ribosomal protein S2 [Vulcanisaeta distributa DSM 14429] Length = 225 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 48/247 (19%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 I + L +GV+ G R + ++F R + I++L + ++ A ++I + Sbjct: 24 IAIERYLAAGVRLGTRVSNAYLQRRGFVFSVRPDGLRILNLRKIDERIRIAAKMI--AMY 81 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +++ + K V K + +++ G TN Sbjct: 82 DPEKVVAYSAKPYGFKPVEMFCKFVRCRAITGRFIPGTFTN------------------- 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 L ++ DL+ D + AI+EA + IP+ Sbjct: 123 ------------------PNLNHYIEA--------DLLISTDPKADVQAIEEAATMGIPV 156 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDT++ VD +IP N+ RS+AL L+A + V Sbjct: 157 IALVDTDTPISYVDLIIPCNNKGRRSLALIYWLLARQVLRVRGELKENEDLPVPPEEFEV 216 Query: 245 VHSKEGM 251 S EG+ Sbjct: 217 KVSLEGI 223 >gi|256811345|ref|YP_003128714.1| ribosomal protein S2 [Methanocaldococcus fervens AG86] gi|256794545|gb|ACV25214.1| ribosomal protein S2 [Methanocaldococcus fervens AG86] Length = 222 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 84/210 (40%), Gaps = 50/210 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L SG+ G + + ME++I+ R + +++D+ +T L+ A + ++ IL Sbjct: 14 LASGIHIGTQQKTKD--MEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLAR--YEPEDIL 69 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V+ + + E K + + +++ G +TN Sbjct: 70 AVSRRIYTMGPLEEFGKYTGIRTIPGRFVPGTLTNP------------------------ 105 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 A G + P+++F+ D ++ A++EA + +PIV + DT Sbjct: 106 -----------------AYKGFME----PEVVFISDPRVDRQALKEATEIGVPIVGLCDT 144 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +D VIP N+ +++AL L+ Sbjct: 145 EHLTSFIDLVIPTNNKGKKAVALIYYLLTR 174 >gi|55377006|ref|YP_134856.1| 30S ribosomal protein S2 [Haloarcula marismortui ATCC 43049] gi|57015337|sp|P29202|RS2_HALMA RecName: Full=30S ribosomal protein S2P; AltName: Full=HS2; AltName: Full=ORFMSG gi|55229731|gb|AAV45150.1| 30S ribosomal protein S2P [Haloarcula marismortui ATCC 43049] Length = 267 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 94/235 (40%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + + MER+I R + +++D+S T ++ A +S+ Sbjct: 80 IPVEDYLGAGVHIGTQQKTQD--MERFIHRVRTDGLYVLDVSMTDERIRTAADFLSN--Y 135 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A+ +++ G +TN Sbjct: 136 EPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPD----------------- 178 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 179 ------------------------YDGYIE----PDIVVVTDPIGDAQAVKEAITVGIPV 210 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD V+P N+ +++++ L+A+ +D + +Y D +S Sbjct: 211 IAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRGAEPTYGLDDFES 265 >gi|23822120|sp|Q8TT39|RS2_METAC RecName: Full=30S ribosomal protein S2P Length = 225 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 87/216 (40%), Gaps = 50/216 (23%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 +I + L +GV G + + M R+++ R + +++D+ T ++ A +++S Sbjct: 38 VSIDEYLAAGVHIGTQQKTQD--MMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSH--Y 93 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RIL V+++ ++ + +++ G +TN + + + Sbjct: 94 DPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQ-IHGFFE---------- 142 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + ++EA + +P+ Sbjct: 143 ----------------------------------PDVIIVTDPAGDAQVLKEASSIGVPV 168 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 VA+ DTN+ VD VIP N+ ++++L L+A Sbjct: 169 VALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAR 204 >gi|20089489|ref|NP_615564.1| 30S ribosomal protein S2 [Methanosarcina acetivorans C2A] gi|19914396|gb|AAM04044.1| ribosomal protein S2p [Methanosarcina acetivorans C2A] Length = 247 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 87/216 (40%), Gaps = 50/216 (23%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 +I + L +GV G + + M R+++ R + +++D+ T ++ A +++S Sbjct: 60 VSIDEYLAAGVHIGTQQKTQD--MMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSH--Y 115 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RIL V+++ ++ + +++ G +TN + + + Sbjct: 116 DPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQ-IHGFFE---------- 164 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + ++EA + +P+ Sbjct: 165 ----------------------------------PDVIIVTDPAGDAQVLKEASSIGVPV 190 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 VA+ DTN+ VD VIP N+ ++++L L+A Sbjct: 191 VALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAR 226 >gi|148782|gb|AAA73102.1| put. membrane protein; putative [Haloarcula marismortui] Length = 266 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 94/235 (40%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + + MER+I R + +++D+S T ++ A +S+ Sbjct: 79 IPVEDYLGAGVHIGTQQKTQD--MERFIHRVRTDGLYVLDVSMTDERIRTAADFLSN--Y 134 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A+ +++ G +TN Sbjct: 135 EPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPD----------------- 177 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 178 ------------------------YDGYIE----PDIVVVTDPIGDAQAVKEAITVGIPV 209 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD V+P N+ +++++ L+A+ +D + +Y D +S Sbjct: 210 IAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRGAEPTYGLDDFES 264 >gi|257388639|ref|YP_003178412.1| 30S ribosomal protein S2 [Halomicrobium mukohataei DSM 12286] gi|257170946|gb|ACV48705.1| ribosomal protein S2 [Halomicrobium mukohataei DSM 12286] Length = 259 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 93/235 (39%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + + L +GV G + + MER+I R + +++D+S T ++ A +++ Sbjct: 72 IPVEEYLGAGVHIGTQQKTQD--MERFIHRVRTDGLYVLDVSMTDSRIRTAADFLAN--Y 127 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A +++ G +TN Sbjct: 128 DPEQILVASSRQYGRFPAEKFADAVGARARTGRFIPGTLTNPD----------------- 170 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 171 ------------------------YDGYIE----PDVVVVTDPIGDAQAVKEAITVGIPV 202 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ VD V+P N+ +++++ L+A+ +D Y AD +S Sbjct: 203 IAMCDSNNTTANVDLVVPTNNKGRKALSVVYWLLANETLDRRGSDTVYELADFES 257 >gi|110668827|ref|YP_658638.1| 30S ribosomal protein S2 [Haloquadratum walsbyi DSM 16790] gi|121687162|sp|Q18G63|RS2_HALWD RecName: Full=30S ribosomal protein S2P gi|109626574|emb|CAJ53038.1| ribosomal protein S2 [Haloquadratum walsbyi DSM 16790] Length = 279 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 90/235 (38%), Gaps = 50/235 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + + MER+I R+ +++D+SQT ++ A +++ Sbjct: 92 IPVEDYLSAGVHIGTQQKTSD--MERFIHRVRDDGLYVLDVSQTDSRIRTAANFLAN--Y 147 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 ++L +++ + A +++ G +TN Sbjct: 148 NPDQMLVTSSRQYGRFPAKKFADAVGARARTGRFIPGTLTNPD----------------- 190 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 G + PD++ V D + A++EA + IP+ Sbjct: 191 ------------------------YAGYIE----PDVVVVTDPIGDAQAVKEAITVGIPV 222 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 +A+ D+N+ D V+P N+ R++++ L+A+ +D Y + ++ Sbjct: 223 IAMCDSNNQTSNTDLVVPTNNKGRRALSVVYWLLANETLDRRGADSLYALDEFEA 277 >gi|150400263|ref|YP_001324030.1| 30S ribosomal protein S2 [Methanococcus vannielii SB] gi|209573670|sp|A6USE6|RS2_METVS RecName: Full=30S ribosomal protein S2P gi|150012966|gb|ABR55418.1| ribosomal protein S2 [Methanococcus vannielii SB] Length = 221 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 100/248 (40%), Gaps = 54/248 (21%) Query: 7 TIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 ++ L SG+ G + M+R+I+ R + +++D+ +T L+ A + +S+ Sbjct: 9 SLDTYLASGIHIGTQQKT--EDMKRFIYRVRSDGLYVLDVRKTDERLRLAAKFLSN--YE 64 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 I+ V + + + + + + V +++ G +TN +K + Sbjct: 65 PQDIMAVTRRVYSVGPLKKFGETTGINTVAGRFVPGTLTNPA-----AKKFAE------- 112 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P++MF+ D +K A++EA + IPIV Sbjct: 113 ---------------------------------PEVMFLSDPRVDKQALKEAIEIGIPIV 139 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV 245 ++ DT +D++IP N+ +S++L L+A + + +G + + + + Sbjct: 140 SMCDTEHLTAHLDFIIPTNNKGRKSVSLMYFLIAREYL----KNRGIIGEEVPFSYDDFL 195 Query: 246 HSKEGMQL 253 G ++ Sbjct: 196 EKAMGAKV 203 >gi|170290627|ref|YP_001737443.1| 30S ribosomal protein S2 [Candidatus Korarchaeum cryptofilum OPF8] gi|209573658|sp|B1L5N1|RS2_KORCO RecName: Full=30S ribosomal protein S2P gi|170174707|gb|ACB07760.1| ribosomal protein S2 [Candidatus Korarchaeum cryptofilum OPF8] Length = 217 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 84/217 (38%), Gaps = 50/217 (23%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ L SGV G + ME++I+ R + IID+ + ++ A + ++ Sbjct: 24 QKYLLSGVHVGTGIRTKD--MEKFIYRVRPDGLCIIDIRKIDERIRTAGKFLAR--FDPD 79 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 R+L V+ + V + A+ + + + L G +TN + Sbjct: 80 RVLAVSARIYGFKPVRKFAEYTGAMYITGRILPGTLTNPQ-------------------- 119 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 + PD++ + D ++ E+ R+ IP+VA+ Sbjct: 120 -------------------------APLHLEPDVVLLSDPRVDRQIHIESVRMGIPVVAL 154 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VD ++ + +D IP N+ RS+AL L+ + Sbjct: 155 VDADNMLENIDLAIPVNNKGRRSLALVYWLLTREVLR 191 >gi|15790223|ref|NP_280047.1| 30S ribosomal protein S2 [Halobacterium sp. NRC-1] gi|169235952|ref|YP_001689152.1| 30S ribosomal protein S2 [Halobacterium salinarum R1] gi|12230551|sp|P57713|RS2_HALSA RecName: Full=30S ribosomal protein S2P gi|209573653|sp|B0R4Y9|RS2_HALS3 RecName: Full=30S ribosomal protein S2P gi|10580681|gb|AAG19527.1| 30S ribosomal protein S2P [Halobacterium sp. NRC-1] gi|167727018|emb|CAP13804.1| ribosomal protein S2 [Halobacterium salinarum R1] Length = 249 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 94/234 (40%), Gaps = 50/234 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 + L +GV G + N M+R+I R + +++D+S+T ++ A +++ Sbjct: 62 IPVEDYLGAGVHIGTQ-QKTND-MDRFIHRVRTDGLYVLDVSRTDDRVRTAADFLAN--Y 117 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +IL +++ + A+ +++ G +TN Sbjct: 118 DPEQILVTSSRQYGRFPAEKFAEAVGARARTGRFIPGTLTNPD----------------- 160 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 DG + PD++ V D + A++EA + IP+ Sbjct: 161 ------------------------YDGYIE----PDVLVVTDPIGDSQAVKEAITVGIPV 192 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 +A+ D+N+ VD V+P N+ R++++ L+A+ +D + +Y D + Sbjct: 193 IAMCDSNNQTGNVDLVVPTNNKGRRALSVVYWLLANETLDRRGAEPTYGLDDFE 246 >gi|325969094|ref|YP_004245286.1| 30S ribosomal protein S2 [Vulcanisaeta moutnovskia 768-28] gi|323708297|gb|ADY01784.1| 30S ribosomal protein S2 [Vulcanisaeta moutnovskia 768-28] Length = 225 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 48/247 (19%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 I + L +GV+ G R + ++F R + I++L + ++ A ++I + Sbjct: 24 IAIERYLAAGVRLGTRVSNAYLQRRGFVFSVRPDGLRILNLRKIDERIRIAAKMI--AMY 81 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 +++ + K V K + +++ G TN Sbjct: 82 DPEKVVAYSAKPYGFKPVEMFCKFVNCKAITGRFIPGTFTN------------------- 122 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 L ++ DL+ D + AI+EA + IP+ Sbjct: 123 ------------------PNLNHYIEA--------DLLISTDPKADAQAIEEAATMGIPV 156 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 +A+VDT++ VD +IP N+ RS+AL L+A + V Sbjct: 157 IALVDTDTPISYVDLIIPCNNKGRRSLALVYWLLARQVLRIRGELKENEDLPVSPEEFEV 216 Query: 245 VHSKEGM 251 S EG+ Sbjct: 217 KVSLEGI 223 >gi|223647632|gb|ACN10574.1| 40S ribosomal protein SA [Salmo salar] Length = 194 Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 49/207 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G + + +ME Y + + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNM-DFQMEHYTYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVCVISSRNTGQRAVLKFASATGATTFHGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLIVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDD 206 + IP +A+ +T+S VD IP N+ Sbjct: 140 VNIPTIAMCNTDSPLRYVDIAIPCNNK 166 >gi|73696584|gb|AAZ81012.1| ribosomal protein SA [Macaca mulatta] Length = 167 Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 47/193 (24%) Query: 33 IFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 I+ + + +II+L +T L A + I + + +++++ V++ A + Sbjct: 1 IYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENPADVSVISSRNTGQRAVLKFAAATGA 59 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDG 151 + ++ G TN Sbjct: 60 TPIAGRFTPGTFTNQ--------------------------------------------- 74 Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 IR P L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ Sbjct: 75 IRAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSV 134 Query: 212 ALFCDLVASAAID 224 L ++A + Sbjct: 135 GLMWWMLAREVLR 147 >gi|240278980|gb|EER42486.1| 40S ribosomal protein S0 [Ajellomyces capsulatus H143] Length = 267 Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 46/178 (25%) Query: 47 QTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNW 106 QT + A ++I+ V I ++ + V++ A + + ++ G TN+ Sbjct: 26 QTWEKVVLAARIIA-AVDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNY 84 Query: 107 KTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 T + ++ P L+ V D Sbjct: 85 IT-----RSFKE----------------------------------------PRLIIVTD 99 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + AI+EA + IP++A+ DT+S + VD IP N+ +I L ++A + Sbjct: 100 PRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLR 157 >gi|289193067|ref|YP_003459008.1| ribosomal protein S2 [Methanocaldococcus sp. FS406-22] gi|288939517|gb|ADC70272.1| ribosomal protein S2 [Methanocaldococcus sp. FS406-22] Length = 222 Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 50/210 (23%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L SG+ G + + ME++I+ R + +++D+ +T L+ A + ++ IL Sbjct: 14 LASGIHIGTQQKTKD--MEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLAR--YEPEDIL 69 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGF 130 V+ + + E K + + +++ G +TN Sbjct: 70 AVSRRIYTMGPLEEFGKYTGIRTIPGRFVPGTLTNP------------------------ 105 Query: 131 TKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDT 190 A G + P+++F+ D ++ A++EA + +PI+++ DT Sbjct: 106 -----------------AYKGFME----PEVVFISDPRVDRQALKEATEIGVPIISLCDT 144 Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 +D VIP N+ +++AL L+ Sbjct: 145 EHLTSFIDLVIPTNNKGKKAVALIYYLLTR 174 >gi|209573704|sp|Q46CL0|RS2_METBF RecName: Full=30S ribosomal protein S2P Length = 225 Score = 95.8 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 89/216 (41%), Gaps = 50/216 (23%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 +I + L +GV G + + M R+++ R + +++D+ T ++ A +++S Sbjct: 38 VSIDEYLAAGVHIGTQQKTQD--MMRFVYRVRTDGLYVLDIQSTDERIRVAAKLLSH--Y 93 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RIL V+++ ++ + + +++ G++TN + + + Sbjct: 94 DPSRILVVSSRQYGQHPARMFSRALSTKSMLGRFIPGLLTNPQ-IHGFFE---------- 142 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + ++EA + +PI Sbjct: 143 ----------------------------------PDIVIVTDPAGDAQVLKEASSIGVPI 168 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 VA+ DTN+ VD VIP N+ ++++L L+A Sbjct: 169 VALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAR 204 >gi|73668947|ref|YP_304962.1| 30S ribosomal protein S2 [Methanosarcina barkeri str. Fusaro] gi|72396109|gb|AAZ70382.1| SSU ribosomal protein S2P [Methanosarcina barkeri str. Fusaro] Length = 247 Score = 95.8 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 89/216 (41%), Gaps = 50/216 (23%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 +I + L +GV G + + M R+++ R + +++D+ T ++ A +++S Sbjct: 60 VSIDEYLAAGVHIGTQQKTQD--MMRFVYRVRTDGLYVLDIQSTDERIRVAAKLLSH--Y 115 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 RIL V+++ ++ + + +++ G++TN + + + Sbjct: 116 DPSRILVVSSRQYGQHPARMFSRALSTKSMLGRFIPGLLTNPQ-IHGFFE---------- 164 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 PD++ V D + ++EA + +PI Sbjct: 165 ----------------------------------PDIVIVTDPAGDAQVLKEASSIGVPI 190 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 VA+ DTN+ VD VIP N+ ++++L L+A Sbjct: 191 VALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAR 226 >gi|297695794|ref|XP_002825112.1| PREDICTED: 40S ribosomal protein SA-like, partial [Pongo abelii] Length = 289 Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 79/225 (35%), Gaps = 49/225 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + +G G L + +ME+YI+ + + +II+L +T L Sbjct: 89 LQMKEEDVLKFFVAGTHLG-GTSL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLL-AARA 145 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + + G TN Sbjct: 146 IAAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTNQ------------- 192 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 193 --------------------------------IQAAFWEPRLLVVTDPRADHQPLMEASY 220 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +P +A+ +T+S VD IP N+ + S+ L ++A + Sbjct: 221 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR 265 >gi|219852950|ref|YP_002467382.1| 30S ribosomal protein S2 [Methanosphaerula palustris E1-9c] gi|219547209|gb|ACL17659.1| ribosomal protein S2 [Methanosphaerula palustris E1-9c] Length = 202 Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 87/222 (39%), Gaps = 50/222 (22%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDT 62 P + + L +G+ G + + M+++I+ R + +IID+ +T ++ + +S Sbjct: 13 PLIPVEEYLAAGIHIGTQQKSKD--MKKFIYRVRGDGLYIIDIRETDERIKTVAKFLSQ- 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 IL V ++ + A ++++ G +TN Sbjct: 70 -FNPSNILVVTSRQYGQYPAKKFADAIGGIAKTARFIPGSLTN----------------- 111 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + L+G + P+++F+ D + ++EA + I Sbjct: 112 ------------------------QNLNGYLE----PEVVFITDPIGDAQVVKEAVQSGI 143 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P+V + DTN+ +D VIP N+ +++++ L+ + Sbjct: 144 PVVGLCDTNNMTQFMDLVIPTNNKGRKALSMIYFLLTREILR 185 >gi|160550135|gb|ABX44772.1| putative 40S ribosomal protein RPSA [Flustra foliacea] Length = 162 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 77/203 (37%), Gaps = 49/203 (24%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + ++++L G G + +ME+Y++ R + +++++ + L A + I Sbjct: 8 LSLKEDDVKKILACGSHIG--TAQVDFQMEQYVYKRRPDGVYVLNMRKMWEKLVLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + V+++ +++ A + + ++ G TN+ Sbjct: 66 A-AIENPADVFVVSSRPYGQRAILKYAAVTGAVAIAGRFTPGTFTNY------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ + D + A++EA Sbjct: 112 --------------------------------IQKNYREPRLLVITDPRADHQAVREASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIP 202 + IP++A+ +++ VD +P Sbjct: 140 VNIPVIALXHSDTPMRFVDIAVP 162 >gi|1171590|emb|CAA64575.1| rps2 [Plasmodium falciparum] Length = 227 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 104/220 (47%), Gaps = 4/220 (1%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T LL+S + G+ +YI+ + N I++ + L K I + Sbjct: 3 ITFDNLLKSKIYIGNIYKNIYFDNYKYIYKIKFNYCILNFTFIALYLYKLYLYIYNISLM 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +ILF+ + + ++ + +N KW+ G++TNW + + I + +++ Sbjct: 63 NNKILFINNNNLIKNFTIKICNLTNNLYIN-KWVSGLLTNWFVLKKKIIIYIWISKIIKN 121 Query: 126 E--NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + N +KK N+ KL +GI++M LP +F+ + N+ + ++E +L++ Sbjct: 122 KYFNNILSKKCIYNLNIIYIKLYNKFNGIKNMINLPKYIFLTNFNKNLI-LKEILKLKLI 180 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +++ ++ + + ++ I GN ++ +S+ L ++ ++ I Sbjct: 181 LISFINLSLDSSNINIKILGNYNNYKSLKLIYKIIYTSLI 220 >gi|308158965|gb|EFO61522.1| Ribosomal protein SA [Giardia lamblia P15] Length = 245 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 84/223 (37%), Gaps = 49/223 (21%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVISD 61 L + ++++L + G + +M+ YIF +++ T + +L + + A +++ Sbjct: 15 LKEADVKKMLVATTHLG--VRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILV- 71 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 TV I VA + A +++ K + +++ G TN + Sbjct: 72 TVDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCE-------- 123 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 P L+ V D ++ AI EA + Sbjct: 124 -------------------------------------PRLLLVNDPVVDRQAILEASYVN 146 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +++ ++++N +D IP N+ + SI L L+A + Sbjct: 147 IPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLR 189 >gi|119719192|ref|YP_919687.1| 30S ribosomal protein S2 [Thermofilum pendens Hrk 5] gi|209573784|sp|A1RWV4|RS2_THEPD RecName: Full=30S ribosomal protein S2P gi|119524312|gb|ABL77684.1| SSU ribosomal protein S2P [Thermofilum pendens Hrk 5] Length = 214 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 83/221 (37%), Gaps = 52/221 (23%) Query: 6 FTIRQLLESGVQFGHR-NFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTV 63 + L +G++ G + + ME +I+ R + +++D+ +T ++ A ++I+ Sbjct: 15 IPLEMYLAAGIRIGTKMKSKF---MEPFIYSARPDGLYLLDVKKTDERIRIAAKMIAR-- 69 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 + + V+ + V + + + L G TN + + Sbjct: 70 YDPSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPA-----LSHFTEA---- 120 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 DLM V D ++ A+ EA + IP Sbjct: 121 ------------------------------------DLMMVTDPRVDEQAVVEAGTMGIP 144 Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 ++A+ DT+S VD +IP N+ +++AL L+A + Sbjct: 145 VIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLR 185 >gi|48477589|ref|YP_023295.1| 30S ribosomal protein S2 [Picrophilus torridus DSM 9790] gi|61215563|sp|Q6L1Q0|RS2_PICTO RecName: Full=30S ribosomal protein S2P gi|48430237|gb|AAT43102.1| small subunit ribosomal protein S2P [Picrophilus torridus DSM 9790] Length = 200 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 50/212 (23%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +SG+ G + + M+ YIF RN +I+D+ +T L A ++++ R +IL Sbjct: 15 KSGIHIGTQIKSKD--MDPYIFKIRNDGLYILDIRKTNHALIIAGKMLAR--YRPEQILA 70 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 VA + A V + ++ + +++ G +TN L + E Sbjct: 71 VAQRQYAFRPVSKFSEVVGSKSIIGRFIPGTLTNPA--------LPNYSEA--------- 113 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 ++ V D + A++EA ++ IPI+A+ D N Sbjct: 114 ----------------------------KIILVTDPLADTQAMKEAIKVGIPIIAMCDAN 145 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + D VD +IP N+ RS+A+ L+A + Sbjct: 146 NKTDFVDLIIPTNNKGRRSLAVIYWLLAREIL 177 >gi|159114778|ref|XP_001707613.1| Ribosomal protein SA [Giardia lamblia ATCC 50803] gi|229891585|sp|A8BE86|RSSA_GIAIC RecName: Full=40S ribosomal protein SA gi|157435719|gb|EDO79939.1| Ribosomal protein SA [Giardia lamblia ATCC 50803] Length = 245 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 84/223 (37%), Gaps = 49/223 (21%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVISD 61 L + ++++L + G + +M+ YIF +++ T + +L + + A +++ Sbjct: 15 LKEADVKKMLVATTHLG--VRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILV- 71 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 T+ I VA + A +++ K + +++ G TN + Sbjct: 72 TIDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCE-------- 123 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 P L+ V D ++ AI EA + Sbjct: 124 -------------------------------------PRLLLVNDPVVDRQAILEASYVN 146 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +++ ++++N +D IP N+ + SI L L+A + Sbjct: 147 IPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLR 189 >gi|294496195|ref|YP_003542688.1| 30S ribosomal protein S2P [Methanohalophilus mahii DSM 5219] gi|292667194|gb|ADE37043.1| SSU ribosomal protein S2P [Methanohalophilus mahii DSM 5219] Length = 242 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 80/216 (37%), Gaps = 50/216 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I + L SGV G + + M ++++ R + +++D+ T +++ +S Sbjct: 57 IDEYLASGVHIGTQQKTQD--MMKFVYRVRTDGLYVLDIQATDSRIRQVSHFLSK--YDP 112 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +IL V+ + +K + +++ G +TN + + Sbjct: 113 AKILVVSARQYGQFPAKMFSKAIGAKSMVGRFIPGTLTNPS-IEGFFE------------ 159 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 PD + V D + I+EA + IP++ Sbjct: 160 --------------------------------PDAIMVTDPAGDAQVIKEAVNIGIPVIG 187 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA 222 + DTN+ VD VIP N+ ++++L L+A Sbjct: 188 LCDTNNMISNVDLVIPTNNKGRKALSLIYWLLAREI 223 >gi|91774302|ref|YP_566994.1| 30S ribosomal protein S2 [Methanococcoides burtonii DSM 6242] gi|121686578|sp|Q12TI2|RS2_METBU RecName: Full=30S ribosomal protein S2P gi|91713317|gb|ABE53244.1| SSU ribosomal protein S2P [Methanococcoides burtonii DSM 6242] Length = 214 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 81/217 (37%), Gaps = 50/217 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I + L +GV G + N M ++++ R + +++D+ T ++ +S + Sbjct: 29 IDEYLAAGVHIGTQQKTQN--MMKFVYRVRTDGLYVLDIQSTDERIRSIAHFLS--MYDP 84 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 RIL V+ + +K +++ G +TN + Sbjct: 85 SRILVVSARQYGQYPATMFSKSVGAVSKVGRFIPGSLTNP---------------VQEGF 129 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + PD++ V D + I+EA + IP+VA Sbjct: 130 FE------------------------------PDVVIVTDPAGDAQVIREAVNVGIPVVA 159 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + DTN+ VD VIP N+ ++++L L+A Sbjct: 160 LCDTNNMTSNVDLVIPTNNKGRKALSLVYWLLAREIA 196 >gi|257076314|ref|ZP_05570675.1| 30S ribosomal protein S2 [Ferroplasma acidarmanus fer1] Length = 200 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 92/227 (40%), Gaps = 50/227 (22%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 +SG+ G + + M+RYIF RN +I+D+ +T L +A ++++ + +IL Sbjct: 15 KSGIHIGTQVKSKD--MDRYIFKIRNDGLYILDIKKTNHALIEAGKMLAR--YQPEQILV 70 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 VA + A V + ++ + +++ G +TN Sbjct: 71 VAQRQYAFKPVAKFSEIVGSSSIIGRFIPGTLTN-------------------------- 104 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 LK + ++ + D + A++EA R+ IP++++ D N Sbjct: 105 -----------PNLKSYYNA--------KVILITDPLADTQAMKEAIRIGIPVISLCDAN 145 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 + D VD +IP N+ S+A+ L++ + SY K Sbjct: 146 NKTDFVDLIIPTNNKGRMSLAVIYWLLSREILKNRGDIKSYDEMKAK 192 >gi|290561877|gb|ADD38336.1| 40S ribosomal protein SA [Lepeophtheirus salmonis] Length = 266 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 74/214 (34%), Gaps = 49/214 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVISDTVARG 66 I +L + V G++N N +M++Y+F +I L + A + I + Sbjct: 15 INLMLAANVHIGNKNV--NYQMKKYVFGTNYEGNNIFKLKSVWEKVLLAARAIV-AIPTM 71 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 + + ++S ++ + ++ G TN Q + ++ Sbjct: 72 TDVCAIGSRSSCQRACLKFGFYCGLTSMAQRFTPGAFTN-----QIQKTFKE-------- 118 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P L+ + D + I EA R+ IP++A Sbjct: 119 --------------------------------PRLLIISDPIADHQPIMEAARINIPVIA 146 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 ++++ VD IP N+ S +I L+A Sbjct: 147 FCNSDTPLSYVDIAIPCNNKSPEAIGFIWWLLAR 180 >gi|160948188|emb|CAO94695.1| putative ribosomal protein SA [Pomphorhynchus laevis] Length = 180 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 78/219 (35%), Gaps = 61/219 (27%) Query: 8 IRQLLESGVQ------FGHRNFLWNPKMERYIF-CERNNTHII-DLSQTVPMLQKALQVI 59 IR +L +G FGH M++YI+ N+ +II D+ + L A + I Sbjct: 15 IRMILAAGAHKWPHRNFGHL-------MKQYIYDGSVNDAYIIMDIRKMWEKLMLAARAI 67 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + I V + + +++ A + + ++ G TN T + ++ Sbjct: 68 ASI-ENPNDICIVGSVPEVQRAILKFAHYTGSVPIAGRFTPGSFTNQIT-----KAFKE- 120 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 P L+ V + ++ AI+EA Sbjct: 121 ---------------------------------------PRLIVVSNPLDDQQAIKEAAY 141 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 + IP++A + SN VD IP N+ + + L + Sbjct: 142 VNIPVIAFTNPTSNISCVDIGIPCNNSTCEASGLMWWFL 180 >gi|298674292|ref|YP_003726042.1| 30S ribosomal protein S2 [Methanohalobium evestigatum Z-7303] gi|298287280|gb|ADI73246.1| ribosomal protein S2 [Methanohalobium evestigatum Z-7303] Length = 236 Score = 93.1 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 86/234 (36%), Gaps = 50/234 (21%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVA 64 I + L SGV G + + M +I+ R + +++D+ T ++ A +S Sbjct: 49 IPIDEYLASGVHIGTQQKTKD--MINFIYRVRTDGLYVLDIQSTEERIKLAASFLSK--Y 104 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 IL + + AK + +++ G +TN + Sbjct: 105 NPSTILVTSARQYGQHPATMFAKAIGAKSMVGRFIPGTLTNPQ----------------- 147 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 ++G + P++ V D + I+E+ + +P+ Sbjct: 148 ------------------------MEGFFE----PEVTLVTDPTGDAQVIKESVNVGVPV 179 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238 VA DTN+ VD VIP N+ ++++L L+A + +Y +D + Sbjct: 180 VAFCDTNNQTSSVDLVIPTNNKGRKALSLVYWLLAKEVAKNMGIPFNYEFSDFE 233 >gi|159154157|gb|ABW93480.1| putative ribosomal protein SA [Barentsia elongata] Length = 252 Score = 93.1 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 47/198 (23%) Query: 28 KMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAA 86 +ME Y++ + + II+L +T L + + ++ + V++ A Sbjct: 10 QMEAYLYKRKTDGVCIINLRRTWEKLLL-AARAIAAIENPADVCAISARPYGQRAVLKFA 68 Query: 87 KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLK 146 + V ++ G TN Sbjct: 69 SYTGATPVAGRFTPGTFTNQ---------------------------------------- 88 Query: 147 RALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDD 206 I+ P L+ V D + ++EA + IP++A +T+S VD IP N+ Sbjct: 89 -----IQAAFREPRLLVVTDPRVDHQPVKEASYVNIPVIAFCNTDSPLRFVDIAIPCNNK 143 Query: 207 SSRSIALFCDLVASAAID 224 S SI L ++ + Sbjct: 144 SEHSIGLMWWMLCREVLR 161 >gi|619569|emb|CAA58577.1| ribosomal protein S2 [Thermus thermophilus] Length = 89 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 6/94 (6%) Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +E +A++EAR+L IP++A+ DT+S+PDLVDY+IPGNDD+ RSI L I Sbjct: 2 KEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLII----- 56 Query: 229 QHSYMGADTKSAGETVVHSKEGMQLEEDSQSSES 262 + G S +V E + E E+ Sbjct: 57 -QARGGVVEPSPSYALVQEAEATETPEGESEVEA 89 >gi|110225707|ref|YP_665712.1| ribosomal protein S2 [Mesostigma viride] gi|17222578|gb|AAL36751.1|AF353999_31 ribosomal protein S2 [Mesostigma viride] Length = 182 Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 18/152 (11%) Query: 52 LQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQ 111 +++A ++ V +GG +LFV++ S S + E +KR Q V +W+GG++TN +S+ Sbjct: 27 MRQACNIVYSIVKKGGSVLFVSSGSAPSKKIEEISKRCNQSFVTERWIGGILTNSAQISK 86 Query: 112 SIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREK 171 +I +L+ TKKE LN + K G+RD P ++ E+ Sbjct: 87 NIIRLK------------STKKEDLNFFKSDFKSDLKYRGLRD----PCPSLIILFGVEE 130 Query: 172 LAIQEARRLRIPIVAVV--DTNSNPDLVDYVI 201 ++EA + IPI+A++ + + Y I Sbjct: 131 KPLREAYKKGIPIIALLLDKEETKISSITYPI 162 >gi|297712909|ref|XP_002832964.1| PREDICTED: 40S ribosomal protein SA-like [Pongo abelii] Length = 198 Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 49/207 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ +++ +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDSIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDD 206 + +P +A+ +T+S VD P N+ Sbjct: 140 VNLPTIALCNTDSPLRYVDIANPCNNK 166 >gi|253742932|gb|EES99556.1| Ribosomal protein SA [Giardia intestinalis ATCC 50581] Length = 244 Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 84/223 (37%), Gaps = 49/223 (21%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFC-ERNNTHIIDLSQTVPMLQKALQVISD 61 L + ++++L + G + +M+ YIF +++ T + +L + + A +++ Sbjct: 15 LKEADVKRMLVATTHLG--VRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILV- 71 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 T+ I VA + A +++ K + +++ G TN + Sbjct: 72 TIDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCE-------- 123 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 P L+ V D ++ AI EA + Sbjct: 124 -------------------------------------PRLLLVNDPVVDRQAILEASYVN 146 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 IP +++ ++++N +D IP N+ + SI L L+A + Sbjct: 147 IPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLR 189 >gi|188572373|gb|ACD65093.1| putative 40S ribosomal protein RPSA [Novocrania anomala] Length = 168 Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 71/208 (34%), Gaps = 49/208 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + + + L G N + +ME+YI+ + + +II++ +T L Sbjct: 8 LSLKEEDVTKFLACSTHLGSTNA--DSQMEQYIYKRKQDGVYIINVKKTWEKLLL-AARA 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++ + V++ A + + ++ G TN Sbjct: 65 IAAIENPADVCVISARPYGQRAVLKFASSTGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRTDHQPVTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDS 207 + IP++A+ +T+S VD IP N+ Sbjct: 140 VNIPVIALANTDSPLKYVDIAIPCNNKG 167 >gi|68482743|ref|XP_714681.1| likely cytosolic ribosomal protein S0 [Candida albicans SC5314] gi|46436269|gb|EAK95634.1| likely cytosolic ribosomal protein S0 [Candida albicans SC5314] Length = 217 Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 70/185 (37%), Gaps = 46/185 (24%) Query: 40 THIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWL 99 +II++ +T + A ++I+ V + ++++ V++ A + + ++ Sbjct: 1 MNIINIGKTWEKIVLAARIIA-AVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFT 59 Query: 100 GGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 G TN+ T + ++ P Sbjct: 60 PGNFTNYIT-----RSFKE----------------------------------------P 74 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 L+ V D + AI+E+ + IP++A+ D +S + VD IP N+ SI L L+A Sbjct: 75 RLVVVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLA 134 Query: 220 SAAID 224 + Sbjct: 135 REVLR 139 >gi|332024006|gb|EGI64224.1| 40S ribosomal protein SA [Acromyrmex echinatior] Length = 300 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 64/203 (31%), Gaps = 46/203 (22%) Query: 22 NFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDC 81 WN R ++I+L T L A + I + + ++ + Sbjct: 19 TSRWNSTSIRKELMASAGVNVINLRHTWEKLLLAARAIV-AIEHPSEVFVISCRHSGQRA 77 Query: 82 VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERK 141 V++ A + + ++ G TN Sbjct: 78 VLKFAAHTGATPIAGRFTPGAFTNQ----------------------------------- 102 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVI 201 I+ P L+ V D + + I EA + IP++A +T+S VD I Sbjct: 103 ----------IQAAFREPRLLIVTDPSTDHQPITEASYVNIPVIAFCNTDSPLRFVDIAI 152 Query: 202 PGNDDSSRSIALFCDLVASAAID 224 P N S ++ L L+A + Sbjct: 153 PCNTKSLHTVGLMWWLLAREVLR 175 >gi|11466323|ref|NP_051151.1| ribosomal protein S2 [Cafeteria roenbergensis] gi|6180105|gb|AAF05802.1|AF193903_25 ribosomal protein S2 [Cafeteria roenbergensis] Length = 249 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 96/243 (39%), Gaps = 24/243 (9%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + Q ++Q Q GHR + + M Y+ + + I++ + ++A Q+++ Sbjct: 4 LTVNQVKVKQFTYLRAQIGHRRRILDKTMNSYVAGNQQDISILNSIFILWSWERASQILT 63 Query: 61 DTVARGGRILFVATKSQASDCVME---------AAKRSAQY--CVNSKWLGGMMTNWKTV 109 + +F++T + + R + V + W GG+++NW Sbjct: 64 RVFLFRQKFVFLSTNKFIPNSWLNNFLEWHFQLKNNRYPHFLGYVGTNWYGGLLSNWS-- 121 Query: 110 SQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD-LMFVVDTN 168 KL L+ K+ KK+ ++ R L + L G G P F+ Sbjct: 122 -----KLWAFVLLVFKD---LLKKKHVSKTRHL--LMKKLAGRISKGNQPAFPDFLFALT 171 Query: 169 REKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228 +K + E+ +R+ V +VD++ N + GNDDS I L+ + + Sbjct: 172 ADKGLLHESDLIRLVSVGLVDSDKNMKSASISLIGNDDSFLLIEFMVRLIEQSFLVSSRE 231 Query: 229 QHS 231 +H Sbjct: 232 EHE 234 >gi|159042555|ref|YP_001541807.1| 30S ribosomal protein S2 [Caldivirga maquilingensis IC-167] gi|209573652|sp|A8MC33|RS2_CALMQ RecName: Full=30S ribosomal protein S2P gi|157921390|gb|ABW02817.1| ribosomal protein S2 [Caldivirga maquilingensis IC-167] Length = 215 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 86/243 (35%), Gaps = 56/243 (23%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + + + + V+ G R + +IF R + I +L + ++ A ++I+ Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITR--YPP 75 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 R++ +TK A + K V + + G +TN Sbjct: 76 SRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDI------------ 123 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 DL+ V D + AI EA IP++A Sbjct: 124 ---------------------------------DLLMVADPKTDFQAINEASLTGIPVIA 150 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 +VDT+S+P +D +IP N+ S+AL L+A RQ + K + V Sbjct: 151 LVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLA--------RQVLRERGELKPNEDLPVS 202 Query: 247 SKE 249 +E Sbjct: 203 WEE 205 >gi|8574705|gb|AAF77668.1|AF193935_1 mitochondrial protein [Grevillea robusta] Length = 134 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACNFIGYPIRQKGRSFFVNTNSLFDEIIEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + + D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCVIIFDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLV 218 EA RL+IPIV++VD+N + + Y IP ND + + LF + + Sbjct: 89 LEADRLQIPIVSLVDSNIPLESYNKITYPIPANDP-IQFVYLFRNSI 134 >gi|289614764|emb|CBI58488.1| unnamed protein product [Sordaria macrospora] Length = 264 Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 67/217 (30%), Gaps = 73/217 (33%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 I QLL + G + + A ++I+ Sbjct: 17 IEQLLAAQCHIGSKK---------------------------EKIVLAARIIASI-DNPS 48 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 I ++ + V++ A + + ++ G TN+ T + ++ Sbjct: 49 DICVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYIT-----RSFKE--------- 94 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ V D + AI+EA + IP++A+ Sbjct: 95 -------------------------------PRLIIVTDPRTDAQAIKEASYVNIPVIAL 123 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 D +S + VD IP N+ +I ++A + Sbjct: 124 CDADSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLR 160 >gi|4584128|emb|CAB40591.1| ribosomal protein S2 [Bacillus cereus ATCC 10987] Length = 67 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 43/63 (68%) Query: 168 NREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +E++A+ EAR+L IPI+ +VDTN +PD +D+VIP NDD+ R++ L +A A ++ Sbjct: 1 RKERIAVAEARKLHIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQ 60 Query: 228 RQH 230 + Sbjct: 61 GEE 63 >gi|297685690|ref|XP_002820416.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Pongo abelii] Length = 239 Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 4/79 (5%) Query: 157 GLPDLMFVVDTNRE----KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIA 212 LPDL+ + T +A+++A ++ IP V +VDTN NP L+ Y +PGNDDS ++ Sbjct: 131 RLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLAVH 190 Query: 213 LFCDLVASAAIDGIARQHS 231 L+C L +A ++ Sbjct: 191 LYCRLFQTAITRAKEKRRQ 209 >gi|315425717|dbj|BAJ47373.1| small subunit ribosomal protein S2 [Candidatus Caldiarchaeum subterraneum] Length = 208 Score = 88.5 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 93/246 (37%), Gaps = 50/246 (20%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 + QL++ V G R + + ME YIF R + ++ ++ + + L A ++IS Sbjct: 12 LEQLVKYNVHVGSRIKVKH--MEPYIFRMRYDGVYLFEVKKILTRLNLAAKLISY--YDP 67 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 +L V+T V + A+ + + K + GM+TN + L++ E Sbjct: 68 SEVLAVSTHVFGMKAVQKFAELTGGMAMAGKMMAGMLTN--------RTLKNYTE----- 114 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 P ++ + D + A++EA RIP++A Sbjct: 115 --------------------------------PSIVIISDPRYDAQALEEAAIARIPVIA 142 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVH 246 + T++ VD VIP N+ S S+ +A ++ + A K + Sbjct: 143 MCSTDNTCSNVDLVIPMNNRSRTSLPYAFWYLARRVLEERGQLTPDFDALVKPEDFMALP 202 Query: 247 SKEGMQ 252 S + Sbjct: 203 SSAETE 208 >gi|14601603|ref|NP_148143.1| 30S ribosomal protein S2 [Aeropyrum pernix K1] gi|6685917|sp|Q9YB45|RS2_AERPE RecName: Full=30S ribosomal protein S2P gi|5105440|dbj|BAA80753.1| 30S ribosomal protein S2P [Aeropyrum pernix K1] Length = 205 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 81/215 (37%), Gaps = 54/215 (25%) Query: 13 ESGVQFGHRNFLWNPKMERY---IFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRI 69 ++GV +G + M ++ I E + +D + L A + +S +I Sbjct: 17 KAGVIYGTQI--CTRYMRQFVHRILPE--GYYQLDYLKIDERLAMAAKFLS--TFEPEKI 70 Query: 70 LFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 V+ + V +R + + + G TN Sbjct: 71 AVVSVRIYGQKPVRMMCERVGCKAITGRIIPGTFTN------------------------ 106 Query: 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVD 189 L+ ++ PD++ V D ++ A+ EA ++ IP+VA+VD Sbjct: 107 -------------PNLEHYVE--------PDVVVVTDPRMDRQAVVEASKVGIPVVALVD 145 Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 T+++ + +D VIP N+ RS+AL ++ + Sbjct: 146 TDNSIENIDLVIPANNRGRRSLALIYWILTREILR 180 >gi|8574707|gb|AAF77669.1|AF193936_1 mitochondrial protein [Platanus occidentalis] Length = 134 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCVVIIDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 EA RL+IPI ++VD+N + Y IP ND + + LF + + Sbjct: 89 LEADRLQIPIASLVDSNIPLGSYKRITYPIPANDP-IQFVYLFRNSI 134 >gi|88604125|ref|YP_504303.1| 30S ribosomal protein S2 [Methanospirillum hungatei JF-1] gi|121729244|sp|Q2FTN4|RS2_METHJ RecName: Full=30S ribosomal protein S2P gi|88189587|gb|ABD42584.1| SSU ribosomal protein S2P [Methanospirillum hungatei JF-1] Length = 202 Score = 85.8 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 85/218 (38%), Gaps = 50/218 (22%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDT 62 P ++ + L +GV G + + M+ +I+ R + +I+D+ +T ++ A + +S Sbjct: 13 PLVSVEEYLAAGVHIGTQQKSSD--MKNFIYRVRGDGLYILDIRETDERIKLAAKFLSQ- 69 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 +IL V ++ A + +++ G +TN + + + + + Sbjct: 70 -YDPAKILVVTSRQYGQYPARRFADSIGATPIIGRYIPGTLTNP-----LLPRYAEPDVV 123 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 + + L + R+ A ++ I Sbjct: 124 VVTDPVSD-----LQVIRE-----------------------------------AIQVSI 143 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 P+VA+ DTN+ LVD V+P N+ +++++ L+ Sbjct: 144 PVVALCDTNNMTSLVDVVVPTNNKGRKALSMIYFLLTK 181 >gi|320582940|gb|EFW97157.1| Mitochondrial ribosomal protein of the small subunit [Pichia angusta DL-1] Length = 292 Score = 85.8 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 42/80 (52%) Query: 2 ALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + Q T+++LL +G GH LW + YI+ N+ HIIDL QTV L++A +V+ Sbjct: 150 SANQVTVQKLLAAGAHLGHFTKLWKHSTQPYIYGVYNDLHIIDLEQTVTHLRRAAKVVEG 209 Query: 62 TVARGGRILFVATKSQASDC 81 V GG + +DC Sbjct: 210 VVENGGTSRIPSVGIVDTDC 229 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 37/75 (49%) Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSA 240 RIP V +VDT+ +P LV Y IP NDDS R+ L C ++A AA G + + + Sbjct: 218 RIPSVGIVDTDCDPALVTYAIPANDDSIRATNLICGVLAKAAERGYRTRLDRVRRYKEKH 277 Query: 241 GETVVHSKEGMQLEE 255 G + + E Sbjct: 278 GASAAQPMSQISFEA 292 >gi|41615290|ref|NP_963788.1| 30S ribosomal protein S2 [Nanoarchaeum equitans Kin4-M] gi|74579664|sp|Q74M65|RS2_NANEQ RecName: Full=30S ribosomal protein S2P gi|40069014|gb|AAR39349.1| NEQ508 [Nanoarchaeum equitans Kin4-M] Length = 201 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 50/209 (23%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 ++G+ G M+ Y+ R + I D+ + L+ A +++S IL Sbjct: 12 KAGIHIG--TRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSY--YEPNEILV 67 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 V + A + + ++ + ++ G +TN + L+ E Sbjct: 68 VGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQ--------LKYYME---------- 109 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 P+++ + D +K A+ +A I I+A+ DTN Sbjct: 110 ---------------------------PEVILITDPIMDKNALHDAYESGITILALCDTN 142 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 + +D+ IP N+ S+S+AL ++A Sbjct: 143 HTKNYIDFCIPANNRGSKSLALIYWILAR 171 >gi|8574649|gb|AAF77640.1|AF193906_1 mitochondrial protein [Zamia integrifolia] Length = 147 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 27/163 (16%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR L V T S + + + A + + C+N +W +GG +T+ ++ Sbjct: 1 ACHSIGSPIRKKGRSLPVNTNSLFDEIIEQMATKIDRSCINDYQWRIGGFLTDSSSMHLF 60 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R KK+ L G PD + +++ +RE Sbjct: 61 PKKIR---------FSRPGKKKI------------NLFGGSGSNQRPDRVVIMNADRESS 99 Query: 173 AIQEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIA 212 I A RL+IPIV++VD+N + Y IP ND S + + Sbjct: 100 VILGADRLQIPIVSLVDSNIPLGLCKGITYPIPAND-SIQFVY 141 >gi|19074122|ref|NP_584728.1| 40S RIBOSOMAL PROTEIN SA or P40 [Encephalitozoon cuniculi GB-M1] gi|74664212|sp|Q8SS60|RSSA_ENCCU RecName: Full=40S ribosomal protein S0 gi|19068764|emb|CAD25232.1| 40S RIBOSOMAL PROTEIN SA or P40 [Encephalitozoon cuniculi GB-M1] Length = 252 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 53/228 (23%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVIS 60 +P ++ L+ S G N RY++ R + +IID++ T L A + Sbjct: 14 IPDEFVKLLIVSQSHLG-GTST-NKSFARYLYGTRPRDRINIIDINATWEKLIIAARAFC 71 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 I V+TK+ V++ + + +++ G TN ++++ D Sbjct: 72 GI-KHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNS-----EVKRVYD-- 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 P ++ V DT +K AI E++ Sbjct: 124 --------------------------------------PRVLIVSDTYADKQAILESQYC 145 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIA---LFCDLVASAAIDG 225 +P +A V+T+++ VD IP N+ S +IA + + G Sbjct: 146 NLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMKTG 193 >gi|302348801|ref|YP_003816439.1| 30S ribosomal protein S2P [Acidilobus saccharovorans 345-15] gi|302329213|gb|ADL19408.1| 30S ribosomal protein S2P [Acidilobus saccharovorans 345-15] Length = 239 Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 85/213 (39%), Gaps = 50/213 (23%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILF 71 ++GV +G + M ++++ + +++D+ + ++ A + + +I Sbjct: 46 KAGVVYGTQI--CTKYMRQFVYKVLPDGFYLLDVKKIDERIRIAGRFL--ASFDPSKIAV 101 Query: 72 VATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT 131 VAT+ V ++ V + + G+ TN Sbjct: 102 VATRIYGQRPVTAMCEKIGCKPVVGRIVPGIFTN-------------------------- 135 Query: 132 KKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN 191 KL ++ P+++ V DT ++ A+ EA ++ +P+VA+ DT+ Sbjct: 136 -----------PKLDIYVE--------PEVVVVTDTRTDRQAVVEASKIGVPVVALADTD 176 Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 S + VD +IP N+ RS+AL L+ + Sbjct: 177 SRVEDVDLIIPANNKGRRSLALVYWLLTREIMR 209 >gi|2350932|dbj|BAA21994.1| ribosomal protein SA (P40) / laminin receptor [Entamoeba histolytica] Length = 172 Score = 82.7 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 46/185 (24%) Query: 41 HIIDLSQTVPMLQKALQVISDTVAR-GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWL 99 I +L +T L A +VI+ ++ VA + A ++ K + V ++ Sbjct: 3 CIFNLMKTWEKLSLAARVIAGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFT 62 Query: 100 GGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 G TN Q +K + P Sbjct: 63 PGSFTN-----QIQKKFME----------------------------------------P 77 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 L+ V D + + A++E+ + +P + +++++ V VIP N+ S SI L ++ Sbjct: 78 RLIIVSDPSVDHQALRESGYINVPTIGFCNSDNSLKNVGIVIPCNNRSRLSIGLMWWMLT 137 Query: 220 SAAID 224 + Sbjct: 138 REILR 142 >gi|300521568|gb|ADK25995.1| r-protein S2p [Candidatus Nitrososphaera gargensis] Length = 243 Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 98/260 (37%), Gaps = 59/260 (22%) Query: 2 ALPQFTIRQL-LESGVQFGH--RNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQ 57 A+ + ++ L +G++ G + M +I +I+D+S+T+ + A + Sbjct: 39 AIDTDNLEKMILSTGIRVGTPVKTKF----MAPFIVKANPEGLYILDISKTLARVDVAAK 94 Query: 58 VISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLR 117 I ++ + + V + + + + +++ G TN L Sbjct: 95 FIGRA--NISKVAVTSAREYGKTPVEKFCELTGATQILGRFMPGTFTNPS--------LP 144 Query: 118 DLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 + E P+++ V D ++ A+ EA Sbjct: 145 NYME-------------------------------------PEIVVVTDPQADQQAVLEA 167 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 R +P++A+ ++++ VD VIP N+ +++A L+A + ++ + +D+ Sbjct: 168 TRAGVPVIAIANSDNVTSKVDLVIPANNRGRKALATVYWLLAREVL----KKQGAIKSDS 223 Query: 238 KSAGETVVHSKEGMQLEEDS 257 + + + E +EE S Sbjct: 224 EMLEKASIDDFETKLVEEVS 243 >gi|255513541|gb|EET89807.1| ribosomal protein S2 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 207 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 83/216 (38%), Gaps = 50/216 (23%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGG 67 LE+G+ + P M+++I+ R+ +++DL + A +++ Sbjct: 11 NDYLEAGIHIATKVKT--PGMKKFIYKVRDDGLYLLDLKTIDSRVSVAASMVAR--YDPK 66 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 I+ A++ A + A+ + + G+ TN Sbjct: 67 DIIVTASRIYAIPAAEKFAEAINAKFIRGRVTPGIFTN---------------------- 104 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +E P L+F+ D+ EK A++EA ++ IPI+A+ Sbjct: 105 ---PLRENFME--------------------PKLIFISDSRNEKQAVKEASKIGIPIIAL 141 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 DT++ +D ++P N+ RS+A L+A + Sbjct: 142 SDTDNITKFIDLIVPVNNRGRRSLAFVYYLLAREVL 177 >gi|255710099|gb|ACU30869.1| 40S ribosomal protein SA (P40) [Ochlerotatus triseriatus] Length = 191 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 8/129 (6%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + IP++A +T+S VD IP N+ S SI Sbjct: 12 IQPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSI 71 Query: 212 ALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSV----LDG 267 L L+A + R + D + ++ + E++ + E++ + Sbjct: 72 GLMWWLLAREVL----RLRGKITQDKWEIKPDLFFYRDPEEAEKEQAAIEAAPPAKDMYP 127 Query: 268 QEVAVVPEL 276 E VV E Sbjct: 128 DEPIVVDET 136 >gi|62719452|gb|AAX93326.1| 30S ribosomal protein S2 [Lactobacillus sanfranciscensis] Length = 64 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 37/51 (72%) Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +L IP++A+VDTN++PD +DYVIP NDD+ R+I L +A A I+G + Sbjct: 1 KLNIPVIAMVDTNTDPDGIDYVIPSNDDAIRAIRLITSTMADAVIEGRQGE 51 >gi|8574661|gb|AAF77646.1|AF193913_1 mitochondrial protein [Asarum canadense] Length = 134 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A + + +GG +TN ++ + I Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATKIGCINDSQWRIGGFLTNCSSLRKKIN 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 89 LEADRSQIPIASSVDSNIPLGSYKRITYPIPANDP-IQFVYLFRNSI 134 >gi|8574699|gb|AAF77665.1|AF193932_1 mitochondrial protein [Liriodendron tulipifera] Length = 134 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 89 LEADRSQIPIASSVDSNIPLGSHKRITYPIPANDP-IQFVYLFRNSI 134 >gi|8574691|gb|AAF77661.1|AF193928_1 mitochondrial protein [Laurus nobilis] Length = 134 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCLVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 89 LEADRSQIPIASSVDSNIPLGSHKRITYPIPANDP-IQFVYLFRNSI 134 >gi|227547147|ref|ZP_03977196.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212368|gb|EEI80264.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 45 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 28/40 (70%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHI 42 + Q T+ +L++G+ FGH+ WNPKM+++I +RN H+ Sbjct: 1 MAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHV 40 >gi|148716965|dbj|BAF63699.1| ribosomal protein SA [Antheraea yamamai] Length = 189 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 66/196 (33%), Gaps = 49/196 (25%) Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 + ++++ V++ A + + ++ G TN Sbjct: 19 PADVFVISSRPFGQRAVLKFAAHTDATPIAGRFTPGAFTNQ------------------- 59 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 I+ P L+ V+D ++ I EA + IP++ Sbjct: 60 --------------------------IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVI 93 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAA--IDGIARQHSY--MGADTKSAG 241 A+ +T+S VD IP N SS SI L L+A + G+ + + D Sbjct: 94 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSREQRWDVVVDLFFYR 153 Query: 242 ETVVHSKEGMQLEEDS 257 + KE Q +E + Sbjct: 154 DPEESEKEEQQAKEQA 169 >gi|110589438|gb|ABG77228.1| 30S ribosomal subunit protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 110 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 IP+V VVDTN++PD +DYVIPGNDD+ R++ LF ++A ++G A S Sbjct: 39 ASSGIPVVGVVDTNNDPDDIDYVIPGNDDAIRAVQLFVQGASAAVLEGRA---SAAHVAA 95 Query: 238 KSAGETVVHSKEG 250 AG+ V K+ Sbjct: 96 SGAGDEFVEVKDD 108 >gi|168048463|ref|XP_001776686.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671978|gb|EDQ58522.1| predicted protein [Physcomitrella patens subsp. patens] Length = 126 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61 + + ++ +L + V G +N + +MERY++ R + II++ +T L+ A +VI+ Sbjct: 1 MKESDVQMMLAADVHLGTKN--CDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIA- 57 Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 + I+ + + V++ A+ + + + G TN Sbjct: 58 AIENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTN 101 >gi|326632108|gb|ADZ99056.1| ribosomal protein S2 [Physarum polycephalum] Length = 470 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 84/221 (38%), Gaps = 13/221 (5%) Query: 5 QFTIRQLLESGVQFGHRNFLW-NPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTV 63 + T + LL G+ W + M +I RN+ HI++++ T+ ++KAL I V Sbjct: 14 KITYKILLAYHSPLGNIVKFWTSFHMNSFILAIRNDIHILNITYTIIQIRKALNTIFHKV 73 Query: 64 ARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL 123 G A +A + + + W+ G++TN+K V+++I+ + L Sbjct: 74 RYRGSFTIYAQAFKALKI-----NHGSIFSFITDWVPGLLTNYKRVTRAIRAYK-LHLAR 127 Query: 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDL----MFVVDTNREKLAIQEARR 179 + + + K +L + P + + + + E Sbjct: 128 TAYFLKRPQLKAIAHSYFNPIPKSSL--FKRRRRTPQIPKFPAISLSILDSNVWLHECLC 185 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 LRIP + + D S + V Y I N S L L A Sbjct: 186 LRIPSIQICDNQSQFEKVTYPIISNQRSMAFSHLIVYLAAE 226 >gi|8574679|gb|AAF77655.1|AF193922_1 mitochondrial protein [Drimys winteri] Length = 134 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 89 LEADRSQIPIASSVDSNIPLGSYKRITYPIPANDP-IQFVYLFRNSI 134 >gi|8574681|gb|AAF77656.1|AF193923_1 mitochondrial protein [Peperomia argyreia] Length = 138 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 64/169 (37%), Gaps = 36/169 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR V T S + + + A + + +GG +TN + Sbjct: 1 ACHFIGSPIRQKGRSFIVNTNSLFDEIIEQMATKIGCINDSQWRIGGFLTNCSS------ 54 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD--TNREKL 172 R R K L+ I+ PD + ++D T + Sbjct: 55 ------------------------PRSRKKNACQLNSIKGSNQQPDCVVIMDAETINKSS 90 Query: 173 AIQEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 I EA RL+IPI + VD+N + Y IP ND + + LF +L+ Sbjct: 91 VILEADRLQIPIASSVDSNMPLGSYKRITYPIPANDP-IQFLYLFRNLI 138 >gi|8574703|gb|AAF77667.1|AF193934_1 mitochondrial protein [Ranunculus sp. Qiu 95024] Length = 134 Score = 80.4 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG TN K+ + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIGCINDSQWRIGGFFTNKKSTKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + N++ PD + ++D +R+ I Sbjct: 61 RNNNNNFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 89 LEADRSQIPIASSVDSNIPLGSYKRITYPIPANDP-IQFVYLFRNSI 134 >gi|330040320|ref|XP_003239854.1| 40S ribosomal protein SSA [Cryptomonas paramecium] gi|327206779|gb|AEA38956.1| 40S ribosomal protein SSA [Cryptomonas paramecium] Length = 208 Score = 80.4 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 78/217 (35%), Gaps = 49/217 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARG 66 I++++ G M+ Y++ R + I ++ + ++ A + ++ V Sbjct: 10 IKKMILCDCHLG--LNYCTNDMKMYVWKMRQDGIFIFNVLEIFKRIKIAAKAVAS-VRNK 66 Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126 ++ V+ ++ V+ + + + KW+ G +TN Sbjct: 67 EEVIVVSCSNENMASVLRFSSYTGCKVILGKWVPGRITN--------------------- 105 Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186 + + P L+ V D + AI EA ++ +P++A Sbjct: 106 ----------QFCKDFIQ--------------PRLVIVADCSSGSQAISEASKVGLPVIA 141 Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +T++ VD VIP N+ + S A L+ + Sbjct: 142 FCNTDTLLKFVDIVIPLNNKNKYSTAFSWWLLTREVL 178 >gi|153012210|ref|YP_001381725.1| ribosomal protein S2 [Medicago truncatula] Length = 56 Score = 80.4 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 29/49 (59%) Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 L IP + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 2 TLGIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRS 50 >gi|303388912|ref|XP_003072689.1| 40S ribosomal protein SA [Encephalitozoon intestinalis ATCC 50506] gi|303301831|gb|ADM11329.1| 40S ribosomal protein SA [Encephalitozoon intestinalis ATCC 50506] Length = 252 Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 81/228 (35%), Gaps = 53/228 (23%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQVIS 60 +P+ ++ L+ S G N RY++ R + IID++ L A + Sbjct: 14 IPEEFVKLLILSQAHLG-GTSA-NKNFARYLYGTRPHDKISIIDINAMWEKLIIAARAFC 71 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 I V+TK+ V++ + + +++ G TN ++++ D Sbjct: 72 GI-KHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNS-----EVRRMYD-- 123 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 P ++ V DT +K AI E++ Sbjct: 124 --------------------------------------PRILIVSDTYADKQAILESQYC 145 Query: 181 RIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIA---LFCDLVASAAIDG 225 +P +A V+ +++ VD IP N+ S +IA + S G Sbjct: 146 NLPTIAFVNADNSLVGVDIAIPMNNRSPSAIAAGFFILSRLISYMKTG 193 >gi|269146876|gb|ACZ28384.1| 40S ribosomal protein SA [Simulium nigrimanum] Length = 212 Score = 80.0 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 10/131 (7%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + IP++A +T+S VD IP N S+ SI Sbjct: 41 IQPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFTNTDSPLKFVDIAIPCNTKSTHSI 100 Query: 212 ALFCDLVASAA--IDGIARQHSYMGA--------DTKSAGETVVHSKEGMQLEEDSQSSE 261 L +A + G R+ S D A + SKE + ++ Sbjct: 101 GLMWWFLAREVLRLRGAIRRTSKWEVMVDLFFYRDPDDAEKEEAASKEALPAAKEVYPEA 160 Query: 262 SSVLDGQEVAV 272 + + A Sbjct: 161 GAETEDAPAAA 171 >gi|146332175|gb|ABQ22593.1| 40S ribosomal protein SA-like protein [Callithrix jacchus] Length = 218 Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 6/128 (4%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ Sbjct: 35 IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSV 94 Query: 212 ALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 L ++A + G + D + KE E + + E G Sbjct: 95 GLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQG 152 Query: 268 QEVAVVPE 275 + A PE Sbjct: 153 EWTAPAPE 160 >gi|73986554|ref|XP_867599.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 3 [Canis familiaris] gi|73989774|ref|XP_860383.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 4 [Canis familiaris] Length = 212 Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 6/128 (4%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ Sbjct: 29 IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSV 88 Query: 212 ALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 L ++A + G + D + KE E + + E G Sbjct: 89 GLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQG 146 Query: 268 QEVAVVPE 275 + A PE Sbjct: 147 EWTAPAPE 154 >gi|56462168|gb|AAV91367.1| hypothetical protein 14 [Lonomia obliqua] Length = 264 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 74/226 (32%), Gaps = 55/226 (24%) Query: 39 NTHIIDLSQTVPMLQKALQVISDT---VARGGRILFVATKSQASDCVMEAAKRSAQYCVN 95 +I+L L+KA + V + ++++ V++ + + Sbjct: 4 GRAVINLR---RYLEKACARVRVQMVPVEDPADVFAISSRPFEQRAVLKFPAHTGATPIA 60 Query: 96 SKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDM 155 ++ G TN I+ Sbjct: 61 GRFTPGAFTNQ---------------------------------------------IQAA 75 Query: 156 GGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFC 215 P L+ V+D ++ I EA + IP++A+ +T+S VD P N SS SI L Sbjct: 76 FREPRLLIVLDPAQDHQPITEASNVNIPVIALCNTDSPLRFVDIANPCNTKSSHSIGLMW 135 Query: 216 DLVASAA--IDGIARQHSY--MGADTKSAGETVVHSKEGMQLEEDS 257 L+A + GI + + D + KE Q +E + Sbjct: 136 WLLAREVLRLRGILTRDQRWDVVVDLFFYRDPEESEKEEQQAKEQA 181 >gi|90076150|dbj|BAE87755.1| unnamed protein product [Macaca fascicularis] Length = 204 Score = 78.9 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 6/128 (4%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ Sbjct: 21 IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSV 80 Query: 212 ALFCDLVASAAI--DGIARQHS--YMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 L ++A + G + + D + KE E + + E G Sbjct: 81 GLMWWMLAREVLRMRGTISREHPWEIMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQG 138 Query: 268 QEVAVVPE 275 + A PE Sbjct: 139 EWTAPAPE 146 >gi|40716462|gb|AAR88769.1| DMRT1 isoform e [Gallus gallus] Length = 228 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 18/130 (13%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + + EA + IP +A+ +T+S VD IP N+ + S+ L ++ Sbjct: 51 PRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWML 110 Query: 219 ASAAID---GIARQH--------------SYMGADTKSAGETVVHSKEGMQLEEDSQSSE 261 A + I+R+H + + ++A E V +KE Q E + + E Sbjct: 111 AREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAV-TKEEFQTEWTAPAPE 169 Query: 262 SSVLDGQEVA 271 + EVA Sbjct: 170 FTAPPQPEVA 179 >gi|71406749|ref|XP_805888.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|70869468|gb|EAN84037.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] Length = 138 Score = 78.5 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P ++FV D + A++EA + IP++A DT++ + VD IP N+ SI Sbjct: 8 IQKKFMQPRVLFVTDPRTDHQALREASLVNIPVIAFCDTDAPLEFVDIAIPCNNRGRYSI 67 Query: 212 ALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 ++ L+A + + D K +E ++ EE +Q++ + V + E Sbjct: 68 SMMYWLLAREVLRLRGTIPRSVPWDVKVDLFFYRDPEEALKHEEVNQAA-APVAEVDE 124 >gi|326563991|gb|ADZ95647.1| 40S ribosomal protein SA [Nosema bombycis] Length = 260 Score = 78.5 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 96/280 (34%), Gaps = 58/280 (20%) Query: 1 MALPQFTI-----RQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQ 53 MA P+ I + +L S G MERY+F R N +ID+ + Sbjct: 1 MAKPEIVIPESFVKLILVSQGHLGGVTSTKT--MERYLFGTRTPENIKVIDMQKQWEKFI 58 Query: 54 KALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSI 113 A + + + + VATK V++ + + V +++ G TN++ V + I Sbjct: 59 LAAR-MFCALKYPKEAVVVATKPFGRKAVLKFCEMTGASPVIGRFIPGTFTNFQ-VKKPI 116 Query: 114 QKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLA 173 + P ++ V D + + Sbjct: 117 E--------------------------------------------PRILIVSDPFADDQS 132 Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIA---LFCDLVASAAIDGIARQH 230 + E+ + +P ++ ++++ VD IP N+ S ++I+ + +G Sbjct: 133 LDESSLVNLPTISFCNSDNITSFVDIAIPMNNRSPQAISAGLFILYRLVRFMKEGEPLDD 192 Query: 231 SYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEV 270 + + + V + + D++ E + D E Sbjct: 193 NMKEVELFIYRDPVELERLVEAQKNDNKVEELIIKDLIEP 232 >gi|28189773|dbj|BAC56501.1| similar to 40S ribosomal protein SA (P40) [Bos taurus] Length = 171 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 74/212 (34%), Gaps = 49/212 (23%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 + +P + V + L + IP + + S+ Sbjct: 140 VNLPTICPVQHGLSSALRGHCIPVQNKGAHSV 171 >gi|209892871|ref|YP_002290844.1| rps2 [Babesia bovis T2Bo] gi|154795880|gb|EDO05064.1| rps2 [Babesia bovis] Length = 221 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 77/195 (39%), Gaps = 6/195 (3%) Query: 33 IFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS-QASDCVMEAAKRSAQ 91 ++ +N +II++ T L K ++I I + T + + K + Sbjct: 28 LYKIIDNCYIINILHTAVSLYKLYKIIFLLSKNKSYITLINTTKLNTNKFIYYLTKFTNS 87 Query: 92 YCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ-GFTKKERLNIERKRDKLKRALD 150 C+N+ W+ G +TN + I + +L +N+ +L + + + L Sbjct: 88 NCINTSWINGTLTNKTVIQNLIIIHLFISKLCELDNEIDMPLITKLKKLKIKYNFTKYLK 147 Query: 151 GIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRS 210 I +F+++ + LA++E + V D N N L D I N+ + +S Sbjct: 148 NI----SCSKFVFILNLDSNILAVKECNSKNKFTMGVCDLNFNTLLTDLNILSNNVNFKS 203 Query: 211 IALFCDLVASAAIDG 225 I F + S I G Sbjct: 204 INFFIKFIISPIIRG 218 >gi|8574685|gb|AAF77658.1|AF193925_1 mitochondrial protein [Amborella trichopoda] Length = 134 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 40/169 (23%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQ-YCVNSKW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A + KW +G +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATKIGCIKY--KKWRIGAFLTNCSSPKKI 58 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 + + + N++ PD + +++ +RE Sbjct: 59 CSRKKKINFGSNQQ--------------------------------PDCVVIMNADRESS 86 Query: 173 AIQEARRLRIPIVAVVDTNSNPD---LVDYVIPGNDDSSRSIALFCDLV 218 I EA RL+IPI + VD+N + + Y IP ND + + LF + + Sbjct: 87 VILEADRLQIPIASSVDSNIPLESYKRITYPIPANDP-IQFVYLFRNSI 134 >gi|187764108|ref|YP_001876557.1| ribosomal protein S2 [Dictyostelium fasciculatum] gi|160688816|gb|ABX45231.1| ribosomal protein S2 [Dictyostelium fasciculatum] Length = 333 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 90/227 (39%), Gaps = 16/227 (7%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62 L + L+ + G + WNP + +++ R II+L T+ ++ L +I + Sbjct: 14 LEKIQYNSLVRNEFYIGGQKARWNPLLVGFLYKIRKGMLIINLEYTIFQIKNGLNLIKNI 73 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 V G+I+ + K + ++ V ++ Q V K+ G L Sbjct: 74 VRNRGKIMILVLKKKINNIVKILLTKNKQGYVVYKYSHGS----------------LMRF 117 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 K+ I + R L G + P L+ + N+++ +E+ I Sbjct: 118 RRMRRLFELKRMGYLIGKLRPITFLKLKGYVALRRPPALLVLTTGNKQEDIYRESLYAGI 177 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 +++ +DTN+ + + GN ++++I L L+ A GI + Sbjct: 178 RVLSFIDTNTMTLWQSHTVVGNSKTNKNINLILLLINYAIFFGIKNE 224 >gi|297485957|ref|XP_002695310.1| PREDICTED: ribosomal protein SA-like [Bos taurus] gi|296477375|gb|DAA19490.1| ribosomal protein SA-like [Bos taurus] Length = 168 Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 62/185 (33%), Gaps = 50/185 (27%) Query: 43 IDLSQ---TVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWL 99 ++L Q +L A ++ + + +++++ V++ A + + ++ Sbjct: 15 MNLDQRFNICKLLLAARAIV--AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFT 72 Query: 100 GGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLP 159 G TN I+ P Sbjct: 73 PGTFTNQ---------------------------------------------IQAAFREP 87 Query: 160 DLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ L ++A Sbjct: 88 RLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLA 147 Query: 220 SAAID 224 + Sbjct: 148 REVLR 152 >gi|8574663|gb|AAF77647.1|AF193914_1 mitochondrial protein [Nymphaea sp. Qiu 91029] gi|8574665|gb|AAF77648.1|AF193915_1 mitochondrial protein [Victoria cf. amazonica] Length = 137 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 33/167 (19%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIGCINDDQWRIGGFLTNCS------- 53 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 L +R R + K+ G P + ++D +R+ I Sbjct: 54 -------------------SNLFPKRIRSRKKKIHFG---SNQPPSCVVIMDADRKSSVI 91 Query: 175 QEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 92 LEADRSQIPIASSVDSNIPSGSYQRITYPIPANDP-IQFVYLFRNSI 137 >gi|307006539|gb|ADN23554.1| 40S ribosomal protein SA (P40)/laminin receptor 1 [Hyalomma marginatum rufipes] Length = 239 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 58/208 (27%) Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQ 128 + ++++ V++ A + + ++ G TN Sbjct: 1 VCAISSRPYGQRAVLKFASFTGATPIAGRFTPGTFTNQ---------------------- 38 Query: 129 GFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVV 188 I+ P L+ V D + + EA + +P++A Sbjct: 39 -----------------------IQAAFREPRLLVVCDPRADHQPVTEASYVNLPVIAFC 75 Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVV--- 245 +T++ VD IP N+ S SI L ++ + R + D E +V Sbjct: 76 NTDATLRYVDIAIPCNNKSQHSIGLLWWMLTREVL----RMRGSILRDI--PWEIMVDLF 129 Query: 246 --HSKEGMQLEEDSQSS--ESSVLDGQE 269 E + EE +Q + E +V + E Sbjct: 130 FYRDPEETEKEEQAQQAVPERAVKETAE 157 >gi|8574689|gb|AAF77660.1|AF193927_1 mitochondrial protein [Calycanthus floridus] Length = 129 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 36/162 (22%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + K +N + PD + ++D +R+ I Sbjct: 61 R-----------------KSAINFGSNQQ---------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIAL 213 EA R +IPI + VD+N + Y IP ND + + L Sbjct: 89 LEADRSQIPIASSVDSNIPLGSHKRITYPIPANDP-IQFVYL 129 >gi|311713|emb|CAA29348.1| rps2 [Pisum sativum] Length = 52 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 28/48 (58%) Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQ 229 IP + ++DTN +PDL D IP NDD+ SI L + + A +G + Sbjct: 1 IPTICLIDTNCDPDLADMSIPANDDAIASIRLILNKLVFAICEGRSSS 48 >gi|73963286|ref|XP_866583.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) isoform 3 [Canis familiaris] Length = 212 Score = 76.2 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 6/128 (4%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N+ S+ Sbjct: 29 IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGVHSV 88 Query: 212 ALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 L ++A + G D + KE E + + E G Sbjct: 89 GLMWWMLAREVLLMRGTISCEHPWEVMPDLYFYRDPEEIEKEEQATAEKAVTKEE--FQG 146 Query: 268 QEVAVVPE 275 + A PE Sbjct: 147 EWTAPAPE 154 >gi|2350896|dbj|BAA21980.1| ribosomal protein SA (P40) / laminin receptor [Entamoeba histolytica] Length = 173 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 49/197 (24%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNT-HIIDLSQTVPMLQKALQVISDTVAR- 65 I+ ++ V G N ME Y++ NN I +L +T L A +VI+ Sbjct: 24 IKMMVACRVHIG--ATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVIAGISNET 81 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 ++ VA + A ++ K + V ++ G TN Q +K + Sbjct: 82 PSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTN-----QIQKKFME------- 129 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P L+ V D + + A++E+ + +P + Sbjct: 130 ---------------------------------PRLIIVSDPSVDHQALRESGYINVPTI 156 Query: 186 AVVDTNSNPDLVDYVIP 202 ++++ V IP Sbjct: 157 GFWNSDNRLKNVGIAIP 173 >gi|167950449|ref|ZP_02537523.1| 30S ribosomal protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 66 Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 184 IVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGET 243 +V VVDTN++PD +DYVIPGNDD+ R++ LF ++A ++G A S AG+ Sbjct: 1 MVGVVDTNNDPDDIDYVIPGNDDAIRAVQLFVQGASAAVLEGRA---SAAHVAASGAGDE 57 Query: 244 VVHSKEG 250 V K+ Sbjct: 58 FVEVKDD 64 >gi|226474632|emb|CAX77563.1| stubarista [Schistosoma japonicum] Length = 181 Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 9/119 (7%) Query: 157 GLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCD 216 P L+ V D + A+ EA + +P++A+ +T+S VD VIP N+ S+ SIA+ Sbjct: 19 REPRLLVVSDPLSDHQAVMEASSVNVPLIALCNTDSPLTRVDIVIPCNNKSTHSIAVVWW 78 Query: 217 LVASAA--IDGIARQHSYMGA-------DTKSAGETVVHSKEGMQLEEDSQSSESSVLD 266 +A I G + + E V E +LE +++ + Sbjct: 79 FLAREVRRIRGEDTRLQQWSVLPDLFLYRDPNEEEQNVEDPEDARLEPVIPGADAEAAE 137 >gi|300708388|ref|XP_002996374.1| hypothetical protein NCER_100543 [Nosema ceranae BRL01] gi|269969653|sp|C4V7V1|RSSA_NOSCE RecName: Full=40S ribosomal protein S0 gi|239605671|gb|EEQ82703.1| hypothetical protein NCER_100543 [Nosema ceranae BRL01] Length = 263 Score = 75.4 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 99/281 (35%), Gaps = 59/281 (20%) Query: 3 LPQFTIRQLLESGVQFGH-RNFLWNPKMERYIFCERN--NTHIIDLSQTVPMLQKALQVI 59 +P ++ +L S G + MERY+F R N +ID+ +T A ++ Sbjct: 8 IPNDFVKLILISQGHLGGIKTSKL---MERYVFGTRKLENIKVIDIEKTWEKFILAARMF 64 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + V+TK+ V++ + + V +++ G N Sbjct: 65 CSL-KHPSDAVVVSTKTFGRKGVLKFCESTCATPVIGRFIPGTFCN-------------- 109 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 +++KR L+ P ++ V D +K A+ E Sbjct: 110 -----------------------NQVKRPLE--------PRVLIVSDPFADKQAVIEGSH 138 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIA---LFCDLVASAAIDGIARQHSYMGAD 236 + + +A +T+++ VD VIP N+ S SI+ + G + + Sbjct: 139 VNLQTIAFCNTDNDVSFVDIVIPMNNRSPVSISAGLFILSRLIRFMKTGEPLDENMKEVE 198 Query: 237 TKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 + + E +L E+ + E++ + E + + Sbjct: 199 LFIYRDPI----ELEKLVEEQKIIENANITIGEQELYEQEE 235 >gi|1173297|sp|P46771|RSSA_STRPU RecName: Full=40S ribosomal protein SA; AltName: Full=Laminin-binding protein p40; Short=LBP/p40 gi|476086|gb|AAA90976.1| 34/67 kD laminin binding protein [Strongylocentrotus purpuratus] Length = 264 Score = 75.4 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 45/152 (29%) Query: 73 ATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTK 132 +++ V++ + V ++ G TN Sbjct: 1 SSRPYGQRAVLKFGAHTGATPVAGRYTPGTFTNQ-------------------------- 34 Query: 133 KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 I+ P ++ V D + + EA + IP++A+ +++S Sbjct: 35 -------------------IQAAFREPRILIVTDPRSDHQPVTEASYVNIPVIALCNSDS 75 Query: 193 NPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 VD IP N+ S SI L +++ + Sbjct: 76 PLRHVDIAIPCNNKSIHSIGLMWWMLSREVLR 107 >gi|145694655|gb|ABP93948.1| laminin receptor precursor [Ovis aries] Length = 175 Score = 75.4 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 6/119 (5%) Query: 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVAS 220 L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ L ++A Sbjct: 1 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 60 Query: 221 AAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + G + D + KE E + + E G+ A PE Sbjct: 61 EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 117 >gi|148692665|gb|EDL24612.1| mCG18671 [Mus musculus] Length = 190 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 49/190 (25%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGDTPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V D + + EA Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139 Query: 180 LRIPIVAVVD 189 + +P +A+ + Sbjct: 140 VNLPTIALCN 149 >gi|331712124|gb|AED90026.1| ribosomal protein SA [Bombyx mori] Length = 133 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 52/117 (44%), Gaps = 4/117 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLGAENV--NFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 + + ++++ V++ A + + ++ G TN + +L Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 121 >gi|331712130|gb|AED90029.1| ribosomal protein SA [Bombyx mandarina] Length = 133 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 4/117 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLG--AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 + + ++++ V++ A + + ++ G TN + +L Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 121 >gi|331712140|gb|AED90034.1| ribosomal protein SA [Bombyx mandarina] gi|331712146|gb|AED90037.1| ribosomal protein SA [Bombyx mandarina] Length = 134 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 4/117 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLG--AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 + + ++++ V++ A + + ++ G TN + +L Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 121 >gi|331712102|gb|AED90015.1| ribosomal protein SA [Bombyx mori] gi|331712104|gb|AED90016.1| ribosomal protein SA [Bombyx mori] gi|331712106|gb|AED90017.1| ribosomal protein SA [Bombyx mandarina] gi|331712108|gb|AED90018.1| ribosomal protein SA [Bombyx mandarina] gi|331712110|gb|AED90019.1| ribosomal protein SA [Bombyx mandarina] gi|331712112|gb|AED90020.1| ribosomal protein SA [Bombyx mori] gi|331712114|gb|AED90021.1| ribosomal protein SA [Bombyx mori] gi|331712116|gb|AED90022.1| ribosomal protein SA [Bombyx mori] gi|331712118|gb|AED90023.1| ribosomal protein SA [Bombyx mandarina] gi|331712120|gb|AED90024.1| ribosomal protein SA [Bombyx mandarina] gi|331712122|gb|AED90025.1| ribosomal protein SA [Bombyx mori] gi|331712126|gb|AED90027.1| ribosomal protein SA [Bombyx mori] gi|331712128|gb|AED90028.1| ribosomal protein SA [Bombyx mori] gi|331712132|gb|AED90030.1| ribosomal protein SA [Bombyx mandarina] gi|331712134|gb|AED90031.1| ribosomal protein SA [Bombyx mori] gi|331712136|gb|AED90032.1| ribosomal protein SA [Bombyx mori] gi|331712138|gb|AED90033.1| ribosomal protein SA [Bombyx mori] gi|331712142|gb|AED90035.1| ribosomal protein SA [Bombyx mandarina] gi|331712148|gb|AED90038.1| ribosomal protein SA [Bombyx mandarina] gi|331712150|gb|AED90039.1| ribosomal protein SA [Bombyx mori] gi|331712152|gb|AED90040.1| ribosomal protein SA [Bombyx mori] gi|331712154|gb|AED90041.1| ribosomal protein SA [Bombyx mandarina] gi|331712156|gb|AED90042.1| ribosomal protein SA [Bombyx mandarina] Length = 134 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 4/117 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLG--AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 + + ++++ V++ A + + ++ G TN + +L Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 121 >gi|167042943|gb|ABZ07657.1| putative ribosomal protein S2 [uncultured marine crenarchaeote HF4000_ANIW137N18] Length = 202 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 82/222 (36%), Gaps = 50/222 (22%) Query: 4 PQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDT 62 + I+++L +G++ G M YI + ++ DL T+ ++ A + I Sbjct: 7 HEEIIKKILSTGIRVGTEVKT--KFMIPYITQSSPDGLYLFDLDITLNRIETAARFIKKF 64 Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122 + ++ + ++ A+ + + + + + +++ G +TN L E Sbjct: 65 DIKK--VIAYSGRAYATTPIEKFCELTGAKKMLGRFMPGTLTNPS--------LPYYSE- 113 Query: 123 LNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRI 182 P L+ + D + A+ EA I Sbjct: 114 ------------------------------------PHLIIISDPQVDAQAVTEATNAGI 137 Query: 183 PIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 P++ + +T++ +D VIP N+ +++A L+A + Sbjct: 138 PVIGIANTDNVTSKLDLVIPANNRGRKALATVYWLLAREILQ 179 >gi|331712144|gb|AED90036.1| ribosomal protein SA [Bombyx mandarina] Length = 134 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 4/117 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALNEEDVTKMLAATTHLG--AENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 + + ++++ V++ A + + ++ G TN + +L Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 121 >gi|8574693|gb|AAF77662.1|AF193929_1 mitochondrial protein [Polyalthia suberosa] Length = 134 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 36/167 (21%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RKKKINFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN---PDLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 89 LEADRSQIPIASSVDSNIPLGSHKRITYPIPANDP-IQFVYLFRNSI 134 >gi|161527824|ref|YP_001581650.1| 30S ribosomal protein S2 [Nitrosopumilus maritimus SCM1] gi|209573672|sp|A9A428|RS2_NITMS RecName: Full=30S ribosomal protein S2P gi|160339125|gb|ABX12212.1| ribosomal protein S2 [Nitrosopumilus maritimus SCM1] Length = 207 Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 82/232 (35%), Gaps = 52/232 (22%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGG 67 +++L +G++ G + M +I +++DL T+ ++ A + I+ Sbjct: 12 KKILSTGIRVGTQVKT--KFMRPFITKASPEGLYMLDLDITLDKIKTAAKFINRLGVENL 69 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 + + + A + + + + +++ G +TN L E Sbjct: 70 IVC--SGRQYAETPIEKFCETLGSKKLLGRFMPGTLTNPS--------LPYYIE------ 113 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 P L+ + D ++ AI EA IP++ + Sbjct: 114 -------------------------------PKLVLISDPQVDEQAITEATNAGIPVIGI 142 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGADT 237 +T++ +D +IP N+ +++A L+ + G ++ M + Sbjct: 143 ANTDNITSNLDVIIPANNRGRKALATVYWLLVRQILIEKGELKEEDPMNIEI 194 >gi|8574667|gb|AAF77649.1|AF193916_1 mitochondrial protein [Euryale sp. Palmer 790] Length = 135 Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 35/167 (20%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A + +GG +TN Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIMEQMATIIGCINDDQWRIGGFLTNCS------- 53 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 L +R R + K+ G P + ++D +R+ I Sbjct: 54 -------------------SNLFPKRIRSRKKKIHFG-----QPPSCVVIMDADRKSSVI 89 Query: 175 QEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 90 LEADRSQIPIASSVDSNIPSGSYQRITYPIPANDP-IQFVYLFRNSI 135 >gi|118576792|ref|YP_876535.1| ribosomal protein S2 [Cenarchaeum symbiosum A] gi|209573649|sp|A0RY14|RS2_CENSY RecName: Full=30S ribosomal protein S2P gi|118195313|gb|ABK78231.1| ribosomal protein S2 [Cenarchaeum symbiosum A] Length = 208 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 88/246 (35%), Gaps = 53/246 (21%) Query: 8 IRQLLE-SGVQFGHRNFLWNPKMERYIF-CERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 +R L+ SG+ G + M+++I + T+ +DL T ++ A Q I T A Sbjct: 12 MRNLITTSGISIGTQVKT--KFMKQFISDTDPTGTYTLDLEATQGRIKAAAQFIEHTGAS 69 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 + + K A + + A+ ++ +++ G +TN Sbjct: 70 ELIVC--SGKDSARVPIRKFAELVGCKDIHKRFMPGTLTN-------------------- 107 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 L + ++ P L+ V D + A+ EA IP++ Sbjct: 108 -----------------PDLPKYME--------PKLLLVCDPQVDAQAVTEATNAGIPVI 142 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA--AIDGIARQHSYMGADTKSAGET 243 + ++++ +D +IP N+ ++A L+A I G + M + Sbjct: 143 GIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVLVIRGEVDETKPMKYEIDDFETK 202 Query: 244 VVHSKE 249 V E Sbjct: 203 DVREDE 208 >gi|302565861|gb|ADL40393.1| putative 40S ribosomal protein SA [Phlebotomus perniciosus] Length = 191 Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 35/73 (47%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + I EA + IP++A +T+S VD IP N S SI Sbjct: 27 IQPAFREPRLLVVTDPSTDHQPIIEASYVNIPVIAFCNTDSPLRFVDIAIPCNTKSIYSI 86 Query: 212 ALFCDLVASAAID 224 L ++A + Sbjct: 87 GLMWWMLAREVLR 99 >gi|307006537|gb|ADN23553.1| 40S ribosomal protein SA [Hyalomma marginatum rufipes] Length = 208 Score = 72.7 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 13/125 (10%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P++A +T++ VD IP N+ S SI Sbjct: 8 IQAAFREPRLLVVCDPRADHQPVTEASYVNLPVIAFCNTDATLRYVDIAIPCNNKSQHSI 67 Query: 212 ALFCDLVASAAIDGIARQHSYMGADTKSAGETVV-----HSKEGMQLEEDSQSS--ESSV 264 L ++ + R + D E +V E + EE +Q + E +V Sbjct: 68 GLLWWMLTREVL----RMRGSILRDI--PWEIMVDLFFYRDPEETEKEEQAQQAVPERAV 121 Query: 265 LDGQE 269 + E Sbjct: 122 KETAE 126 >gi|186920126|ref|YP_001874780.1| ribosomal protein S2 [Hemiselmis andersenii] gi|186461072|gb|ACC78234.1| ribosomal protein S2 [Hemiselmis andersenii] Length = 218 Score = 72.3 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 75/195 (38%), Gaps = 50/195 (25%) Query: 32 YIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT--KSQASDCVMEAAKRS 89 ++ +R+ II++ V ML++A++ G+ILFV S+ + A + Sbjct: 47 HLLGKRDGFGIINVEHYVEMLKQAVRFSHKIHEVQGKILFVNNPIDSKFDGLIKTLALKI 106 Query: 90 AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRAL 149 + KW+ G +T KK +L+ + Sbjct: 107 DEPYFLGKWVSGTLT---------------------------KKVKLDYK---------- 129 Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSR 209 + V++ + I+E +++ +P + + D++S+ + Y I N+ Sbjct: 130 -----------AIIVLNPKKSVFLIKETKKIGLPTICLGDSDSDIFDIMYPILCNNSKGD 178 Query: 210 SIALFCDLVASAAID 224 SI L+++A ++ Sbjct: 179 SILFCLILLSNAILE 193 >gi|1125065|gb|AAC50313.1| laminin-binding protein [Homo sapiens] Length = 125 Score = 72.3 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N+ + S+ Sbjct: 28 IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSV 87 Query: 212 ALFCDLVASAAID 224 L ++A + Sbjct: 88 GLMWWMLAREVLR 100 >gi|327273425|ref|XP_003221481.1| PREDICTED: 40S ribosomal protein SA-like [Anolis carolinensis] Length = 289 Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 49/199 (24%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L + G L + +ME+YI+ + + +II+L + L A+ I Sbjct: 8 LQMKEEDVLKFLAAETHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRIWEKLLLAVHAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + + +++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVIFSRNTGQHAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L+ V+D + + E Sbjct: 112 --------------------------------IQAAFHEPCLLVVIDLRADHQPLTEPSY 139 Query: 180 LRIPIVAVVDTNSNPDLVD 198 + IP +A+ +T+ VD Sbjct: 140 VNIPTIALCNTDCPLCYVD 158 >gi|114606119|ref|XP_527301.2| PREDICTED: similar to 33 kDa protein [Pan troglodytes] Length = 355 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 2/126 (1%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L V D + + EA + +P +A+ +T+S VD IP N+ + S+ Sbjct: 192 IQAAFREPRLPVVTDPRVDHQPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSV 251 Query: 212 ALFCDLVASAA--IDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 + ++ I G + T E + ++ + G+ Sbjct: 252 GVMWWMLVPEVRRISGTISREHPWEVMTDPCFYRDPEEIEKEKQAAAEKAVTNEEFQGEW 311 Query: 270 VAVVPE 275 A P+ Sbjct: 312 TAPAPQ 317 >gi|169835930|ref|ZP_02869118.1| 30S ribosomal protein S2 [candidate division TM7 single-cell isolate TM7a] Length = 43 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIID 44 MA+ + I+ LLE+GV FGH+ W+PKM YI +R ++HIID Sbjct: 1 MAV-KVDIKALLEAGVHFGHKTSRWHPKMAPYIHSKRQDSHIID 43 >gi|73952488|ref|XP_848690.1| PREDICTED: similar to laminin receptor 1 (ribosomal protein SA) [Canis familiaris] Length = 167 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 76/203 (37%), Gaps = 44/203 (21%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ ++ + +II+L +T L A + Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKKKCDGIYIINLKRTWEKLLLAARAT 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + +++++ V++ + + + G +TN Sbjct: 66 V-AIENPADVSVISSRNTGQFAVLKFTAATGATPIAGHFTSGNLTNQIQ----------- 113 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 ++ R + + +PDL D + + EA Sbjct: 114 ---------------AGSLPRAKASHQ-----------IPDL---TDPRADHQPLTEASY 144 Query: 180 LRIPIVAVVDTNSNPDLVDYVIP 202 + +P +A+ +T+S+ +D P Sbjct: 145 INLPTIALCNTDSSLSYMDIATP 167 >gi|110816071|ref|YP_684403.1| ribosomal protein S2 [Oltmannsiellopsis viridis] gi|86450282|gb|ABC96361.1| ribosomal protein S2 [Oltmannsiellopsis viridis] Length = 296 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 28 KMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME--- 84 K+E ++ RN +IIDL TV + A +VI T+ G IL + T S + E Sbjct: 24 KVEPFVLGTRNRFNIIDLRATVKSMIIAAKVIKQTLEIGKHILIINTNSYNIPVLKEFKE 83 Query: 85 ---AAKRSAQY-CVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 ++ + VN KW GG +TNW +S+ + + + + ++ Sbjct: 84 SLVYIEKVKYFSFVNEKWFGGTLTNWVGLSKKVTRFKRFTQFVD 127 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNS-NPDLVDYVIPGNDDSSRSIALFCDLVA 219 L+ V++ N K AI+EA +L IP+VA+VD+N+ + + + Y I N + I F + V+ Sbjct: 232 LVVVLNANANKHAIREAFKLNIPVVAIVDSNTFDREKIAYPIFANSFAPAFINQFFNFVS 291 Query: 220 SAA 222 Sbjct: 292 KVI 294 >gi|73949343|ref|XP_857587.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) isoform 2 [Canis familiaris] Length = 203 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 5/120 (4%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I+ P L+ V D + + EA + +P +A+ +T+S VD IP N + S+ Sbjct: 29 IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCN-KGAHSV 87 Query: 212 ALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDG 267 L ++A + G + D + KE E + + E +G Sbjct: 88 GLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEG 147 >gi|297710358|ref|XP_002831870.1| PREDICTED: 40S ribosomal protein SA-like [Pongo abelii] Length = 251 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 6/118 (5%) Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + V D + + EA + + +A+ +T+S VD IP N+ + S+ L ++A Sbjct: 104 LVVTDPRADHQPLTEASYVNLLTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAQE 163 Query: 222 AI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 + G + D + KE E + + E G+ A PE Sbjct: 164 VLCMRGAISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 219 >gi|6175935|gb|AAF05345.1| rps2 [Plasmodium berghei] Length = 192 Score = 69.6 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 89/193 (46%), Gaps = 5/193 (2%) Query: 6 FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVAR 65 T + LL+S + G+ +YI+ ++N I++ + + L K I + Sbjct: 3 ITFKDLLKSKIYIGNNYKNIYINNYKYIYKIKHNYCILNFTVIILYLYKLYLYIYNISLI 62 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 +ILF+ + ++ ++ + + + KW+ G++TNW + I LE+L Sbjct: 63 NNKILFIINNNLITNLIINICNLTNNFYI-IKWIPGLLTNWYMFKKKIIIYLWLEKLFKN 121 Query: 126 EN--QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIP 183 + +KK N+ +KL + ++GI++M LP + N L ++E +L++ Sbjct: 122 KYIINILSKKCLYNLNNIYNKLYKNINGIKNMIVLPK--HICLLNYNGLILKEILKLKLI 179 Query: 184 IVAVVDTNSNPDL 196 +++ ++ + + Sbjct: 180 LISFINLSLDSSN 192 >gi|6651525|gb|AAF22356.1|AF202318_1 ribosomal protein S2 [Zea mays] Length = 133 Score = 69.6 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 41/169 (24%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 AL + + + R F+ TK+ + AK + C+N S+W +G TN Sbjct: 1 ALDFVGYLICQKSRSFFLKTKNLFIYSI--MAKMWS--CINDSQWKIGAFFTNSY----- 51 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 KK R + L PD + ++ +R+ Sbjct: 52 ----------------ANPKKFRSRNNKIYFGL----------NRQPDCVVILHPDRKSS 85 Query: 173 AIQEARRLRIPIVAVVDTNSNPDL---VDYVIPGNDDSSRSIALFCDLV 218 I EA R +IPI ++VD+ L ++Y IP ND R + LF + + Sbjct: 86 VILEADRSQIPIASLVDSTIPWKLDKRINYSIPANDP-MRLVYLFRNSI 133 >gi|299830444|ref|YP_003734815.1| ribosomal protein S2 [Pythium ultimum] gi|299830495|ref|YP_003734866.1| ribosomal protein S2 [Pythium ultimum] gi|269810821|gb|ACZ43850.1| ribosomal protein S2 [Pythium ultimum] gi|269810872|gb|ACZ43901.1| ribosomal protein S2 [Pythium ultimum] gi|269812134|gb|ACZ44432.1| ribosomal protein S2 [Pythium ultimum] gi|269812185|gb|ACZ44483.1| ribosomal protein S2 [Pythium ultimum] Length = 198 Score = 69.6 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 76/190 (40%), Gaps = 35/190 (18%) Query: 31 RYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSA 90 +I+ R+N II+L L++ ++I T+ + +IL + + + ++ Sbjct: 38 PFIYGIRHNYTIINLKNISFFLKRIFKLIKFTINKEEKILIIGNSDDIKFLINKKFIKNN 97 Query: 91 QYCV--NSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRA 148 Q V N W+ G++TN T N +K + ++ KL Sbjct: 98 QNIVFFNKDWVNGLVTNKIT------------------NNPINEKINYLLNKEEIKL--- 136 Query: 149 LDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSS 208 ++ + + EK +E L+IP ++ ++T+ + ++Y I N + Sbjct: 137 ------------VLIIKSSINEKFLNKELSTLKIPTISFINTSQSLKDINYPIITNSKNI 184 Query: 209 RSIALFCDLV 218 +S+ L+ Sbjct: 185 KSLYTLMYLL 194 >gi|8574669|gb|AAF77650.1|AF193917_1 mitochondrial protein [Nuphar sp. Palmer 689] Length = 137 Score = 69.6 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 33/167 (19%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A + +GG +TN Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATIIGCINDSQWRIGGFLTNCS------- 53 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + K K P + ++D +R+ I Sbjct: 54 ------------------SNLFPKKIRSRKKKIHFGS----NQPPSCVVIMDADRKSSVI 91 Query: 175 QEARRLRIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 EA R +IPI + VD+N + Y IP ND + + LF + + Sbjct: 92 LEADRSQIPIASSVDSNIPSGSYQRITYPIPANDP-IQFVYLFRNSI 137 >gi|119628690|gb|EAX08285.1| hCG31107, isoform CRA_b [Homo sapiens] Length = 185 Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGVYIINLKKTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 + + +++++ V++ A + + ++ G TN Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTN 110 >gi|308235004|ref|ZP_07665741.1| 30S ribosomal protein S2 [Gardnerella vaginalis ATCC 14018] Length = 35 Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 26/35 (74%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER 37 + Q T+ ++L++G+ FGH+ WNPKM+++I +R Sbjct: 1 MAQITMSEMLKAGLHFGHQTRRWNPKMKQFILTQR 35 >gi|329765803|ref|ZP_08257369.1| 30S ribosomal protein S2 [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137646|gb|EGG41916.1| 30S ribosomal protein S2 [Candidatus Nitrosoarchaeum limnia SFB1] Length = 207 Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 77/218 (35%), Gaps = 54/218 (24%) Query: 9 RQLLESGVQFGH--RNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVAR 65 +++L +G++ G + M +I +++D+ T+ ++ A + I+ Sbjct: 12 KKILSTGIRVGTPVKTKF----MTPFITKASPEGLYMLDIDITLEKIKTAAKFINRLGTD 67 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNK 125 + + + A+ + + + + +++ G +TN L E Sbjct: 68 KLIVC--SARQYANTPIEKFCEMLGSKKLLGRFMPGTLTNPS--------LPYYIE---- 113 Query: 126 ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIV 185 P ++ + D + AI EA IP++ Sbjct: 114 ---------------------------------PKVVLISDPQVDVQAITEATNAGIPVI 140 Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + +T++ +D +IP N+ +++A L+ + Sbjct: 141 GISNTDNITSKLDVIIPANNRGRKALATVYWLLVRQIL 178 >gi|8574646|gb|AAF77639.1|AF193904_1 mitochondrial protein [Ginkgo biloba] Length = 130 Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 16/141 (11%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A + GR L V T S + + + + A R + C+N +W +GG +TN+ + Sbjct: 1 ACHSTGSPIRGKGRSLSVNTNSLSDEIIEQMATRIDRSCINDYQWRIGGFLTNYSGMHFF 60 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 +K+R ++ R + +++R+ +L G PD + +++ +RE Sbjct: 61 PKKIR-------------SRTFRYSTDKERNGKINSLGG-SGSNQQPDRVVIMNADRESS 106 Query: 173 AIQEARRLRIPIVAVVDTNSN 193 I EA RL+IPIV+ VD+N Sbjct: 107 VILEADRLQIPIVSPVDSNIP 127 >gi|6010099|emb|CAB57256.1| hypothetical protein [Entodinium caudatum] Length = 163 Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 39/73 (53%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ V D + AI E+ + +P++A+ ++++ VD IP N+ ++ SIA+ L+ Sbjct: 23 PRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVDCAIPCNNRNNYSIAMIWYLL 82 Query: 219 ASAAIDGIARQHS 231 A ++ + Sbjct: 83 TKAVLEIKKEEEG 95 >gi|301762169|ref|XP_002916506.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein SA-like [Ailuropoda melanoleuca] Length = 289 Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 92/271 (33%), Gaps = 61/271 (22%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISD----TVA 64 +LL +G G L + +ME+Y+ ++ +++++ +T L ++ D + Sbjct: 17 KLLAAGTHLG-GTNL-DFQMEQYLHKRKSGGIYVMNVRRTWEKL-----LVVDRTIVAIG 69 Query: 65 RGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLN 124 I ++ ++ V++ A + ++ G + N Sbjct: 70 TPADISVISPRNTGQXAVLKFADATGATP--XRFTPGTLRN------------------- 108 Query: 125 KENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPI 184 +L+ A P ++ V D + E + +P Sbjct: 109 -------------------QLQAAF-------XEPXVLEVTDPRADHQPFPEVSYVNLPT 142 Query: 185 VAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETV 244 + + +T+S VD V P ++ + S AL ++A + + Sbjct: 143 ITLCNTDSPLCCVDIVTPCDNKRAHSAALLWRMLAGEVLSMHGTISREHPWEVVPHLYFY 202 Query: 245 VHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 +E + E+D+ E G+ A+ PE Sbjct: 203 RDPEEVEKEEQDAAEKEE--FQGEWTALGPE 231 >gi|119605358|gb|EAW84952.1| similar to Laminin receptor 1, isoform CRA_b [Homo sapiens] Length = 167 Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 4/97 (4%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGR 68 + L +G G L + +ME+YI+ + + +II+L +T L A + I + Sbjct: 17 KFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIV-AIENPAD 73 Query: 69 ILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 + +++++ V++ A + + ++ G TN Sbjct: 74 VSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTN 110 >gi|326694054|gb|AEA03300.1| Rps2 [Populus alba] gi|326694058|gb|AEA03303.1| Rps2 [Populus deltoides] gi|326694060|gb|AEA03304.1| Rps2 [Populus tremula] gi|326694063|gb|AEA03306.1| Rps2 [Populus tremuloides] gi|326694066|gb|AEA03308.1| Rps2 [Populus nigra] gi|326694069|gb|AEA03310.1| Rps2 [Populus maximowiczii] Length = 40 Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 21/34 (61%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN 38 ++++LE+GV FGH WNPKM YI +R Sbjct: 7 NINLKEMLETGVHFGHATRKWNPKMAPYISAKRK 40 >gi|332239778|ref|XP_003269076.1| PREDICTED: 40S ribosomal protein SA-like [Nomascus leucogenys] Length = 178 Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 4/117 (3%) Query: 162 MFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASA 221 + D + + EA + + +A+ +T+S VD IP N+ + S+ L ++A Sbjct: 31 LVATDPKADHQPLTEASYVNLLTIALCNTDSPLQYVDVAIPCNNKRAHSVGLMWWMLARE 90 Query: 222 AIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 + + S E ++ EE + + ++ + G+ A PE Sbjct: 91 VLR-MRGTFSREHLWEVMPDLHFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPE 146 >gi|119600111|gb|EAW79705.1| hCG2022940 [Homo sapiens] Length = 166 Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 4/106 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ R + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLTAGTHLG-GTNL-DFQMEQYIYKRRSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 + + ++ ++ V++ A + + ++ G TN Sbjct: 66 V-AIENPAVVSVISFRNTGQRAVLKFAAVTGATPIAGRFTPGNFTN 110 >gi|307206930|gb|EFN84776.1| 40S ribosomal protein SA [Harpegnathos saltator] Length = 288 Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 6/103 (5%) Query: 9 RQLLESGVQFGHRNFLWNPKMERYIFCER---NNTHIIDLSQTVPMLQKALQVISDTVAR 65 + LL +G+ G N +ME+Y++ +R +I+L T L A I + Sbjct: 17 KMLLAAGIHLG--AENVNFQMEQYVYKKRVDGAGVSVINLCHTWEKLSLAACAIV-AIEH 73 Query: 66 GGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT 108 + ++ + V++ A + + ++ G TN Sbjct: 74 PSEVFVISRRHSGQRAVLKFAIHTGATPIAGRFTPGAFTNQIQ 116 >gi|149018239|gb|EDL76880.1| rCG25653, isoform CRA_c [Rattus norvegicus] Length = 191 Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 + + +++++ V++ A + + ++ G +T Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGPLT 109 >gi|8574651|gb|AAF77641.1|AF193907_1 mitochondrial protein [Pinus sp. Qiu 94013] Length = 123 Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 23/141 (16%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + G +L V T S + D V + A + + C+N +W +GG +TN ++ Sbjct: 1 ACHSIGSPIREKGLLLSVNTNSLSDDIVEQMATKIDRSCINDYQWRIGGFLTNSSSMHL- 59 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 F ++ + R R++ G G PD + +++ +RE Sbjct: 60 -----------------FPIPRKIRLSRSRNRKINFFGG---SGQQPDRVVIMNADRESS 99 Query: 173 AIQEARRLRIPIVAVVDTNSN 193 I EA RL+IPIV++VD+N Sbjct: 100 VILEADRLQIPIVSLVDSNIP 120 >gi|297287076|ref|XP_002803103.1| PREDICTED: 40S ribosomal protein SA-like, partial [Macaca mulatta] Length = 162 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 14/113 (12%) Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYM 233 + EA + +P + + +T+S VD IP N+ + S+ L ++A + H + Sbjct: 1 LTEASYVNLPTIVLCNTDSPLHYVDIPIPCNNKGAHSVGLMWWMLAREVL------HMHG 54 Query: 234 GADTKSAGETV-----VHSKEGMQLEEDSQSSESSV---LDGQEVAVVPELMS 278 + E + E ++ EE + + +++ G+ A PE+ + Sbjct: 55 TISHEHPWEVIPDLYFYRDPEEIEKEEQAATEKAATNKEFQGEWTAPAPEVTA 107 >gi|290559143|gb|EFD92505.1| ribosomal protein S2 [Candidatus Parvarchaeum acidophilus ARMAN-5] gi|326422522|gb|EGD71918.1| Ribosomal protein S2 [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 199 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 48/195 (24%) Query: 26 NPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 N +R++F N I+++ ++ A + +S+ IL V+T A V Sbjct: 25 NKAFDRFVFKRIPNKFTILNIKLIDERIKLAAKFLSN--YNRKNILLVSTLDSAYYAVYN 82 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDK 144 +K ++L G MTN + K Sbjct: 83 FSKLMKVSVNFGRYLAGSMTN------------------------VSYKNFFE------- 111 Query: 145 LKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGN 204 P ++ + D + AI +A+++ IPIV + +T+++ +D +IPGN Sbjct: 112 --------------PKVLLITDPKSNRRAINDAKKINIPIVGIANTDNSTSFIDMIIPGN 157 Query: 205 DDSSRSIALFCDLVA 219 + S SI L L+A Sbjct: 158 NKSGNSIGLILFLLA 172 >gi|169837182|ref|ZP_02870370.1| 30S ribosomal protein S2 [candidate division TM7 single-cell isolate TM7a] Length = 30 Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 20/30 (66%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERY 32 + T++QLLE G FGH+ WNPKM+ Y Sbjct: 1 MAVITMKQLLEVGAHFGHQAKRWNPKMKPY 30 >gi|125586583|gb|EAZ27247.1| hypothetical protein OsJ_11185 [Oryza sativa Japonica Group] Length = 280 Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 W+P+ + + + II+L +T LQ A +VI + I+ + + V++ Sbjct: 35 WDPRNGNF---KWSGIFIINLGKTWEKLQLAARVIV-AIENPQDIIVQSARPYGQRAVLK 90 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 A+ + + + + G TN S S +L Sbjct: 91 FAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 122 >gi|255521680|ref|ZP_05388917.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL J1-175] Length = 60 Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 23/34 (67%) Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 N +PD +DYVIP NDD+ R++ L +A A I+ Sbjct: 1 NCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIE 34 >gi|9695410|ref|NP_037632.1| ribosomal protein S2 [Phytophthora infestans] gi|6692662|gb|AAF24805.1|U17009_38 ribosomal protein S2 [Phytophthora infestans] gi|58012168|gb|AAW62576.1| ribosomal protein S2 [Phytophthora infestans] gi|58202007|gb|AAW67062.1| ribosomal protein S2 [Phytophthora infestans] gi|58202054|gb|AAW67108.1| ribosomal protein S2 [Phytophthora infestans] Length = 196 Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 78/203 (38%), Gaps = 35/203 (17%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 +G N ++ +I+ R++ II+L L++ ++I + + +IL + ++ Sbjct: 23 YGESLVYTNKEILPFIYGSRHDYTIINLKDVSLFLKRIFKLIKYMLQKNEKILIIGNNNE 82 Query: 78 ASDCVMEAA--KRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKER 135 + + K N +W+ G++TN + NK K+ Sbjct: 83 VQFLLNTSFVKKNPNIIFFNKEWINGLITN-----------KIRNTTFNKIINYLLKENE 131 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 + + ++ + + ++ QE L+IP +++++TN Sbjct: 132 IKL----------------------ILIIKSSIKDTFLNQELSTLKIPTISLINTNQTIK 169 Query: 196 LVDYVIPGNDDSSRSIALFCDLV 218 +DY I N + +SI L+ Sbjct: 170 NIDYPIITNSRNIQSIYTLMYLL 192 >gi|73986552|ref|XP_867591.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) isoform 2 [Canis familiaris] Length = 160 Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 6/103 (5%) Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMG 234 A + +P +A+ +T+S VD IP N+ + S+ L ++A + G + Sbjct: 2 ASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWE 61 Query: 235 A--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 62 VMPDLYFYRDPEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 102 >gi|149018241|gb|EDL76882.1| rCG25653, isoform CRA_e [Rattus norvegicus] Length = 108 Score = 62.3 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 48/104 (46%), Gaps = 4/104 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMM 103 + + +++++ V++ A + + ++ G + Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGRL 108 >gi|268306504|gb|ACY95373.1| ribosomal protein SA [Manduca sexta] Length = 101 Score = 62.3 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G N + +ME Y++ R + TH+I+L +T L A + + Sbjct: 8 LALSEEDVTKMLAATTHLGSENV--HFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSA 90 + + ++++ V++ A + Sbjct: 66 V-AIENPADVFVISSRPFGQRAVLKFAAHTG 95 >gi|297678405|ref|XP_002817071.1| PREDICTED: 40S ribosomal protein SA-like [Pongo abelii] Length = 179 Score = 62.3 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 48/109 (44%), Gaps = 4/109 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +M++YI+ ++ +II+L +T L A I Sbjct: 16 LQMEEEDVLKFLAAGTHLG-GTNL-DFQMKQYIYKKKCGGVYIINLKRTWEKLLLAACAI 73 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT 108 + + +++++ ++ + V S++ G+ TN Sbjct: 74 V-AIENPADVHIISSRNTGQKATLKFTAATGATPVASRFTPGIFTNQIQ 121 >gi|119607486|gb|EAW87080.1| hCG1984468, isoform CRA_a [Homo sapiens] Length = 166 Score = 62.3 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 + + +++++ V++ A + + + G T Sbjct: 66 V-AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFT 109 >gi|109070068|ref|XP_001093651.1| PREDICTED: 40S ribosomal protein SA-like [Macaca mulatta] Length = 224 Score = 61.9 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 82/279 (29%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L + FG N + +ME+YI + + AL + Sbjct: 8 LQMEEEDVLKFLAARTHFGGTNLYF--QMEQYICKRKSDGI--------------ALAIA 51 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119 + + ++++ V++ A + V + G TN Sbjct: 52 --AIENPAVVSVTSSRNTGQRAVLKFAAATGATPVAGCFTPGTFTNR------------- 96 Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179 I+ P L V D + + EA Sbjct: 97 --------------------------------IQATFREPRLPAVTDPRVDHQSFTEASF 124 Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID---GIARQH------ 230 + +P+ A+ +T+S V IP N+ + S+ ++ I+R+H Sbjct: 125 VNLPMTALCNTDSPLCYVYIAIPRNNKGAYSVGSMWWMLVPKVQRLSGSISREHPWQVMP 184 Query: 231 --------SYMGADTKSAGETVVHSKEGMQLEEDSQSSE 261 + + ++A E V +KE Q E ++E Sbjct: 185 DPCFYRDFEELEKEDQAAAEKAV-TKEEFQGEWVEATTE 222 >gi|26344606|dbj|BAC35952.1| unnamed protein product [Mus musculus] gi|26344622|dbj|BAC35960.1| unnamed protein product [Mus musculus] Length = 102 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 45/145 (31%), Gaps = 45/145 (31%) Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121 + + +++++ V++ A + + ++ G TN Sbjct: 3 AIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ--------------- 47 Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 I+ P L+ V D + + EA + Sbjct: 48 ------------------------------IQAAFREPRLLVVTDPRADHQPLTEASYVN 77 Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDD 206 +P +A+ +T+S VD IP N+ Sbjct: 78 LPTIALCNTDSPLRYVDIAIPCNNK 102 >gi|328479949|gb|EGF48999.1| 30S ribosomal protein S2 [Lactobacillus rhamnosus MTCC 5462] Length = 74 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 191 NSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEG 250 +++PD +D +IP NDD+ R++ L +A A I+G + + + A + S E Sbjct: 2 HTDPDDIDVIIPSNDDAIRAVRLITSKMADAIIEGNQGEDQEDDQEQQPAADKKADSMED 61 Query: 251 M 251 + Sbjct: 62 I 62 >gi|119623207|gb|EAX02802.1| hCG1989629, isoform CRA_a [Homo sapiens] gi|119623208|gb|EAX02803.1| hCG1989629, isoform CRA_a [Homo sapiens] Length = 161 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Query: 176 EARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGA 235 EA + +P +A+ +T+S VD IP N+ + S+ L ++A + + S+ Sbjct: 2 EASSVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGLMWWMLAREVLR-MRGTISHEHP 60 Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLD---GQEVAVVPE 275 E ++ EE + + + + G+ A PE Sbjct: 61 WEVMPDLYFYRDPEEIEKEEQAAAEKVMTKEEFQGEWTAPAPE 103 >gi|322503875|emb|CBZ38961.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 109 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 4/102 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + ++LL G RN M++YI+ +HIIDL L A +VI Sbjct: 11 LRMKESDAQKLLAMRCHIGTRNQS--SAMKKYIYGRTAEGSHIIDLHMMWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGG 101 + V + +++ + + + ++ +++ G Sbjct: 69 A-AVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPG 109 >gi|145932373|ref|YP_001165422.1| ribosomal protein S2 [Phytophthora sojae] gi|110169616|gb|ABG54082.1| ribosomal protein S2 [Phytophthora sojae] Length = 198 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 78/203 (38%), Gaps = 35/203 (17%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 +G N ++ +I+ R++ II+L L++ ++I + + +IL + + Sbjct: 25 YGESLTYTNKEILPFIYGSRHDYTIINLKDVSFFLKRTFKLIKYMLQKNEKILIIGNADE 84 Query: 78 ASDCV--MEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKER 135 + K N +W+ G++TN + ++ NK K+ Sbjct: 85 VKFLLTTAFVKKNPNIIFFNKEWINGLITN-----------KIMDTTFNKVINYLLKENE 133 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 + + ++ + + ++ QE L+IP +++V+TN Sbjct: 134 IKL----------------------ILIIKSSIKDTFLNQELSTLKIPTISLVNTNQTIK 171 Query: 196 LVDYVIPGNDDSSRSIALFCDLV 218 ++Y I N + +SI L+ Sbjct: 172 NINYPIVTNSKNIQSIYTLMYLL 194 >gi|119573588|gb|EAW53203.1| hCG1997137, isoform CRA_b [Homo sapiens] Length = 215 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 + + +++++ +++ A + + + G T Sbjct: 66 V-AIENPADVSVISSRNTGQRAMLKFAAATGATPIAGHFTPGTFT 109 >gi|332374026|gb|AEE62154.1| unknown [Dendroctonus ponderosae] Length = 100 Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 +AL + + ++L + G + +ME+Y++ R + HI++L + L A + I Sbjct: 8 LALKEEDVTKMLAASAHLG--TTNVDYQMEQYVYKRRSDGVHILNLRKLWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 + + ++ + V++ A + Sbjct: 66 V-AIEHPAEVFVISNRPYGQRAVLKFAAHTGA 96 >gi|517295|emb|CAA56485.1| putative nucleic acid binding protein [Sulfolobus acidocaldarius] Length = 154 Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +GV G MER+I+ R +++D+ + L+ A + IS R +L Sbjct: 37 LSAGVHIGTHT--CTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISR--FRPEAVL 92 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 VA++ A V + ++ ++ ++ G +TN Sbjct: 93 TVASRPYAFTPVQKFSEVVRGKEISGRFPPGTLTN 127 >gi|297663377|ref|XP_002810158.1| PREDICTED: 40S ribosomal protein SA-like [Pongo abelii] Length = 133 Score = 60.0 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 50/117 (42%), Gaps = 4/117 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTCEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKL 116 + + ++++ +++ A + + + G TN + +L Sbjct: 66 V-AIENPADVSVTSSRNTGQRAMLKFAAATGATPIAGHFTPGTFTNQIQAAFREPRL 121 >gi|8574697|gb|AAF77664.1|AF193931_1 mitochondrial protein [Magnolia grandiflora] Length = 110 Score = 60.0 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 32/139 (23%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN 193 EA R +IPI + VD+N Sbjct: 89 LEADRSQIPIASSVDSNIP 107 >gi|293341757|ref|XP_002725040.1| PREDICTED: rCG25653-like [Rattus norvegicus] gi|293353196|ref|XP_002728161.1| PREDICTED: rCG25653-like [Rattus norvegicus] Length = 111 Score = 60.0 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 48/157 (30%), Gaps = 46/157 (29%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRD 118 + + +++++ V++ A + + ++ G TN Sbjct: 1 MRIVAIENPAVSVISSRNTGHRAVLKFAAATGATPIAGQFTPGTFTNQ------------ 48 Query: 119 LEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEAR 178 I+ P L+ V D + + EA Sbjct: 49 ---------------------------------IQAAFREPWLLVVTDPRADHQPLTEAS 75 Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFC 215 + +P +A+ +T+S VD IP N + S+ L Sbjct: 76 YVNLPTIALCNTDSPLCYVDIAIPCN-KGAHSVGLMW 111 >gi|73963284|ref|XP_866569.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) isoform 2 [Canis familiaris] Length = 160 Score = 60.0 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 177 ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMG 234 A + +P +A+ +T+S VD IP N+ S+ L ++A + G Sbjct: 2 ASYVNLPTIALCNTDSPLCYVDIAIPCNNKGVHSVGLMWWMLAREVLLMRGTISCEHPWE 61 Query: 235 A--DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 D + KE E + + E G+ A PE Sbjct: 62 VMPDLYFYRDPEEIEKEEQATAEKAVTKEE--FQGEWTAPAPE 102 >gi|71026021|ref|XP_762713.1| ribosomal protein S2 [Theileria parva strain Muguga] gi|68349662|gb|EAN30430.1| ribosomal protein S2, putative [Theileria parva] Length = 230 Score = 59.6 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 96/228 (42%), Gaps = 10/228 (4%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWN-PKMERYIFCERNNTHIIDLSQTVPMLQKALQVISD 61 + T LLE + + L N K + I+ N++ II+L+ T L K ++ Sbjct: 1 MKFLTFNNLLEKNIHI---SKLENIKKFDDNIYKIVNDSCIINLTYTSVFLYKLYKIFYI 57 Query: 62 TVARGGRILFVAT-KSQASDCVMEAAKRSAQYCVNSK-WLGGMMTNWKTVSQSIQKLR-D 118 + + + K + + K S NS+ W+ G +TN K +S +I L Sbjct: 58 LNSENLYVTIINNFKFYRNKFINLLLKFSNNNFFNSRYWVKGFLTN-KEISYNILILNLW 116 Query: 119 LEELLNKENQGFTK-KERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEA 177 +E+ K +T + NI + K++ ++ + +F++D +++ ++E Sbjct: 117 VEKFYLKFIDTYTNLRIPYNITKLIKKMQHMYGSLK-LKPFSKFVFLLDADKDTHVMKEC 175 Query: 178 RRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225 ++ V S+ D +D+ I N + S+ + A+++G Sbjct: 176 ITSNKFLMGVCSYGSSTDFIDFYIYMNKKNEISLNFLTKFILIASMNG 223 >gi|9884628|dbj|BAB02634.1| unnamed protein product [Arabidopsis thaliana] Length = 86 Score = 59.6 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN 38 + +++ +GV FGH WNP+M YI + Sbjct: 7 NIDLEKIMRAGVHFGHGTRKWNPRMAPYISTKHK 40 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 15/89 (16%) Query: 84 EAAKRSAQYCV--NSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERK 141 E R+ + KW M T + + K++ ++R+ Sbjct: 11 EKIMRAGVHFGHGTRKWNPRMAPYISTKHK-------------EGFNRLLKRDAAVLKRQ 57 Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 +++ L GI+ M GLPD++ ++D E Sbjct: 58 LSRMETYLGGIKYMTGLPDIVIILDQQEE 86 >gi|50261299|ref|YP_052907.1| ribosomal protein S2 [Saprolegnia ferax] gi|48237612|gb|AAT40661.1| ribosomal protein S2 [Saprolegnia ferax] Length = 198 Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 79/216 (36%), Gaps = 35/216 (16%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 + L +S +G K +I+ R+N II+L T+ LQKAL +I + + Sbjct: 17 LNSLFKSKNFYGESLKETKKKNLPFIYGFRHNYSIINLKATIFFLQKALFLIKLCIKKNK 76 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 +IL + + E+ K N+ +++I + + +N Sbjct: 77 KILIIGDSFDIKFLLSESKK----------------INFTQKNKNI--ILKNDIWINGLL 118 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 T L + ++ + +E + E IPI+ + Sbjct: 119 TNKTVSNFLKH-----------------NKINLIILLKSKTKENYLLTEFNHKNIPIITL 161 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 +TNSN D ++Y I N + +S+ L+ + Sbjct: 162 NNTNSNIDYINYPIFSNTKNLKSLFFLIYLIRKTFL 197 >gi|171778504|ref|ZP_02919631.1| hypothetical protein STRINF_00482 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282727|gb|EDT48151.1| hypothetical protein STRINF_00482 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 46 Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 19/26 (73%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPK 28 + +++QLLE+GV FGH+ WNPK Sbjct: 21 MAVISMKQLLEAGVHFGHQTRRWNPK 46 >gi|11466193|ref|NP_066516.1| ribosomal protein S2 [Naegleria gruberi] gi|10444228|gb|AAG17794.1|AF288092_19 ribosomal protein S2 [Naegleria gruberi] Length = 264 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 81/241 (33%), Gaps = 34/241 (14%) Query: 11 LLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L GV G+ F+ + ++ +NN I ++ + + L++ + + L Sbjct: 6 LYSLGVHIGNTKFVLQSYYKPFLLGYKNNYCIYNMQKIIFYLKRVFHLFYYMGVEKAKFL 65 Query: 71 FVATKSQASDCVMEAA-----KRSAQYCVNSKWLGGMMTNWKT----VSQSIQKLRDLEE 121 F + +++ + + + KW G ++N T + I ++ + Sbjct: 66 FYFHSFSSFSNILKLFFFKQINETRNFLFDEKWSYGQLSNLYTSCYILFTDIFNFKENMK 125 Query: 122 --------------------LLNKENQGFTKKERLNIERKRDKLKR---ALDGIRDMGGL 158 L ++ E ++ +K R R + Sbjct: 126 NTKNYSLYSRISFYNFFFSLLFYTFHKRVPGMEWETHIKRIEKYWRFFLFFKFYRHLNKF 185 Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP-DLVDYVIPGNDDSSRSIALFCDL 217 PDL + EA+ L+IP+V +D + + Y + GN S I F + Sbjct: 186 PDLFLFFSPVNFPIPAIEAKNLKIPVVGNLDIDFTYFSYISYPLFGNSQSV-FIYFFYFV 244 Query: 218 V 218 + Sbjct: 245 L 245 >gi|119620139|gb|EAW99733.1| hCG40558, isoform CRA_b [Homo sapiens] Length = 181 Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 47/106 (44%), Gaps = 7/106 (6%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME++I+ + + +II+L +T L A Sbjct: 8 LQMKEEDVIKFLAAGTHLG-GTNL-DFQMEQHIYKRKSDGIYIINLKRTWERLLLA---- 61 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 + + + +++++ +++ A + + ++ TN Sbjct: 62 AHAIENPTDVSVISSRNPGQQAILKFAAATGAIPIAGHFISETFTN 107 >gi|71396821|ref|XP_802422.1| 40S ribosomal protein SA [Trypanosoma cruzi strain CL Brener] gi|70862910|gb|EAN80976.1| 40S ribosomal protein SA, putative [Trypanosoma cruzi] Length = 110 Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 4/103 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCE-RNNTHIIDLSQTVPMLQKALQVI 59 + + + +++L+ G +N M++YI + T+IIDL T L A +VI Sbjct: 11 LRMKEGDVQKLVAMHCHLGTKNRS--NAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVI 68 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGM 102 + V + +T+ + + ++ + +++ G Sbjct: 69 A-AVENPQDVTVCSTRLFGQRAIFKFSQLVGTSFLAGRFIPGT 110 >gi|239811659|gb|ACS27146.1| ribosomal protein S2 [Heterosigma akashiwo] gi|239811699|gb|ACS27185.1| ribosomal protein S2 [Heterosigma akashiwo] gi|288871914|dbj|BAI70600.1| ribosomal protein S2 [Heterosigma akashiwo] Length = 181 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 77/211 (36%), Gaps = 47/211 (22%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGG 67 ++ L+S + G M + ++ RNN I++L+ T LQ+ ++ + + Sbjct: 13 LKDFLKSNLHLGSPKSEVQNNMNKLLYGFRNNISILNLNHTFVSLQRFFMLVHNLRSTNQ 72 Query: 68 RILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKEN 127 ILF+ + V WL +T S + K ++L Sbjct: 73 HILFLG------------------FPV---WLTHQWKKLETKSNGVYKF-FNDDLDLAYI 110 Query: 128 QGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAV 187 +KK + I + LP++ +V ++E IP+ Sbjct: 111 GKHSKKIGVIF-------------IFN-SQLPNISKIVHFSKE---------FNIPLSGF 147 Query: 188 VDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 + SN L D+ I GN S +S+ LF + Sbjct: 148 ASSTSN--LYDFPIFGNFKSKKSLLLFYHFL 176 >gi|8574695|gb|AAF77663.1|AF193930_1 mitochondrial protein [Sarcandra grandifolia] Length = 110 Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 32/141 (22%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + NK+ PD + ++D++R+ I Sbjct: 61 RNKKIHFGSNKQ--------------------------------PDCVVIMDSDRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSNPD 195 EA R +IPI + V++N + Sbjct: 89 LEADRSQIPIASSVESNIPLE 109 >gi|119620138|gb|EAW99732.1| hCG40558, isoform CRA_a [Homo sapiens] Length = 181 Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 53/134 (39%), Gaps = 8/134 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME++I+ + + +II+L +T L A Sbjct: 8 LQMKEEDVIKFLAAGTHLG-GTNL-DFQMEQHIYKRKSDGIYIINLKRTWERLLLA---- 61 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT-VSQSIQKLRD 118 + + + +++++ +++ A + + ++ TN D Sbjct: 62 AHAIENPTDVSVISSRNPGQQAILKFAAATGAIPIAGHFISETFTNQIHWQPSGSHIFGD 121 Query: 119 LEELLNKENQGFTK 132 EE +E K Sbjct: 122 PEEFEKEEQAAAEK 135 >gi|62002193|gb|AAX58704.1| 40S ribosomal protein SA [Hydractinia echinata] Length = 87 Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + L + + + L SG G +N + ME Y++ + + HII+L QT L A +VI Sbjct: 8 LQLKEEDVTKFLASGAHLGAQNVDRH--MESYVYKRKSDGIHIINLRQTWEKLVLAARVI 65 Query: 60 SDTVARGGRILFVATKSQASDC 81 + + ++ + + Sbjct: 66 AGI-ENPADVCVISCRPYGTRA 86 >gi|114629474|ref|XP_001144901.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] gi|114629476|ref|XP_001144974.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114629478|ref|XP_001145056.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|114629480|ref|XP_001145132.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] Length = 119 Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 4/109 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G N + +ME++I+ + + +II+L +T L A+ I Sbjct: 8 LQMKEEDVLKFLGAGTHLGDTN--LDFQMEQHIYKRKSDGIYIINLKRTWEKLLLAVHAI 65 Query: 60 SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT 108 + + ++++ +++ A + + + G TN Sbjct: 66 V-AIENPADVSVMSSRYTGQRALLKFAAATGATLIAGHFTPGTFTNQIQ 113 >gi|119631484|gb|EAX11079.1| hCG17445 [Homo sapiens] Length = 171 Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 41/108 (37%), Gaps = 3/108 (2%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVIS 60 + + + + + L +G G L + +ME+YI+ + + +I++ +T A I Sbjct: 8 LPMKEEDVLKFLSAGTHLG-GTNL-DFQMEQYIYMKSDGIYILNQKKTWEKFLLAAHAIV 65 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT 108 + + ++++ A + V + + TN Sbjct: 66 -VIEIPADVSVISSRKTGQKGTPILAAVTGATLVTGCFTPRIFTNQIQ 112 >gi|8574673|gb|AAF77652.1|AF193919_1 mitochondrial protein [Nelumbo nucifera] Length = 110 Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 32/139 (23%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLLDEIMEQMATRIGCINDSQWRIGGFLTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RNKKINFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN 193 EA R +IPI + VD+N Sbjct: 89 LEADRSQIPIASSVDSNIP 107 >gi|145932463|ref|YP_001165375.1| ribosomal protein S2 [Phytophthora ramorum] gi|110169661|gb|ABG54126.1| ribosomal protein S2 [Phytophthora ramorum] gi|188038024|gb|ACD46642.1| ribosomal protein S2 [Phytophthora ramorum] Length = 198 Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 80/203 (39%), Gaps = 35/203 (17%) Query: 18 FGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQ 77 +G N ++ +I+ R++ II+L L++ ++I + + +IL + ++ Sbjct: 25 YGESTTYTNKEILPFIYGSRHDYIIINLKNISFFLKRVFKLIKYMLQKNEKILIIGNANE 84 Query: 78 ASDCVMEAAKRS--AQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKER 135 + + + N +W+ G++TN + ++ NK K+ Sbjct: 85 VKFLLTTSFIKKNPNIIFFNKEWVNGLITN-----------KIIDTTFNKVINYLFKENE 133 Query: 136 LNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPD 195 + + ++ + + ++ QE L+IP +++++T+ Sbjct: 134 IKL----------------------ILIIKSSIKDTFLNQELSTLKIPTISLINTSQTLK 171 Query: 196 LVDYVIPGNDDSSRSIALFCDLV 218 ++Y + N + +SI L+ Sbjct: 172 NINYPLVTNSRNIQSIYALMYLL 194 >gi|8574701|gb|AAF77666.1|AF193933_1 mitochondrial protein [Clematis sp. Qiu 95085] Length = 113 Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 29/139 (20%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +GG +TN Sbjct: 1 ACHFIGSPIRQKGRSFFVNTNSLFDEIIEQMATRIGCINDSQWRIGGFLTN--------- 51 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 K+ R R+K PD + ++D +R+ I Sbjct: 52 ---------------KKIKKSKQKIRSRNKKINF-----GSNQQPDCVVIMDADRKSSVI 91 Query: 175 QEARRLRIPIVAVVDTNSN 193 EA R +IPI + VD+N Sbjct: 92 LEADRSQIPIASSVDSNIP 110 >gi|8574653|gb|AAF77642.1|AF193909_1 mitochondrial protein [Trillium sp. Qiu 95016] Length = 127 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 58/161 (36%), Gaps = 41/161 (25%) Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQSIQKLRDLE 120 + + G LF+ T +ME +N S+W +G +TN + + Sbjct: 3 IRQKGNSLFLKTNHVFIYEIMEEMASC----INDSQWRIGAFLTNS------CSSPKKIR 52 Query: 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRL 180 K N G PD + ++D +R+ I EA R Sbjct: 53 SRKKKINDGS-------------------------NQQPDCVVILDADRKSSVILEADRS 87 Query: 181 RIPIVAVVDTNSNP---DLVDYVIPGNDDSSRSIALFCDLV 218 +IPI ++VD+ + Y IP ND + + LF + Sbjct: 88 QIPIASLVDSTIPLGFYKRITYPIPANDP-IQFVYLFRHSI 127 >gi|38016251|gb|AAR07519.1| ribosomal protein S2 [Ecballium elaterium] gi|38016253|gb|AAR07520.1| ribosomal protein S2 [Diplocyclos palmatus] gi|38016257|gb|AAR07522.1| ribosomal protein S2 [Bryonia dioica] gi|38016259|gb|AAR07523.1| ribosomal protein S2 [Acanthosicyos naudinianus] gi|38016261|gb|AAR07524.1| ribosomal protein S2 [Citrullus colocynthis] gi|38016263|gb|AAR07525.1| ribosomal protein S2 [Citrullus lanatus] gi|38016265|gb|AAR07526.1| ribosomal protein S2 [Lagenaria siceraria] gi|38016271|gb|AAR07529.1| ribosomal protein S2 [Luffa quinquefida] gi|38016273|gb|AAR07530.1| ribosomal protein S2 [Benincasa hispida] gi|38016277|gb|AAR07532.1| ribosomal protein S2 [Luffa echinata] gi|38016279|gb|AAR07533.1| ribosomal protein S2 [Luffa graveolens] gi|38016281|gb|AAR07534.1| ribosomal protein S2 [Trichosanthes cucumerina] gi|38016287|gb|AAR07537.1| ribosomal protein S2 [Praecitrullus fistulosus] Length = 33 Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMER 31 + +++E+GV FGH WNP+M Sbjct: 7 NIHLEEMMEAGVHFGHGTRKWNPRMAP 33 >gi|167950450|ref|ZP_02537524.1| 30S ribosomal protein S2 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 50 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/40 (55%), Positives = 30/40 (75%) Query: 142 RDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181 +KL R++ GI+DMGGLPD MFV+D E +A+ EAR+L Sbjct: 1 MEKLDRSIGGIKDMGGLPDAMFVIDVGNENIAVAEARKLG 40 >gi|38016275|gb|AAR07531.1| ribosomal protein S2 [Cucurbita pepo] Length = 33 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMER 31 + +++E+GV FGH WNP+M Sbjct: 7 NIHLEEMMEAGVHFGHGTRXWNPRMAP 33 >gi|28189637|dbj|BAC56433.1| similar to 40S ribosomal protein P40 [Bos taurus] Length = 80 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%) Query: 179 RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 + +P +A+ +T+S VD IP N+ + S+ L ++A + Sbjct: 1 YVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLR 46 >gi|254550634|ref|ZP_05141081.1| 30S ribosomal protein S2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 45 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 27/41 (65%) Query: 43 IDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 +DL QT+ + KA + + +TVA GG +LFV TK QA + V Sbjct: 1 MDLQQTLTFIDKAYEFVKETVAHGGSVLFVGTKKQAQESVA 41 >gi|38016255|gb|AAR07521.1| ribosomal protein S2 [Coccinia palmata] Length = 33 Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMER 31 + ++E+GV FGH WNP+M Sbjct: 7 NIHLEXMMEAGVHFGHGTRKWNPRMAP 33 >gi|297281343|ref|XP_002802049.1| PREDICTED: 40S ribosomal protein S0-like [Macaca mulatta] Length = 341 Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 173 AIQEAR-RLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A +E R + +P +A+ +T+S VD IP N+ + S+ L + A + Sbjct: 246 ACREPRLVVNLPTIALCNTDSPLRCVDIAIPCNNKGAHSVGLMWWVPARKVL 297 >gi|38016267|gb|AAR07527.1| ribosomal protein S2 [Echinocystis lobata] gi|38016269|gb|AAR07528.1| ribosomal protein S2 [Marah oreganus] gi|38016283|gb|AAR07535.1| ribosomal protein S2 [Sicyos angulatus] gi|38016285|gb|AAR07536.1| ribosomal protein S2 [Sechium edule] Length = 33 Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 5 QFTIRQLLESGVQFGHRNFLWNPKMER 31 + ++E+GV FGH WNP+M Sbjct: 7 NIHLEAMMEAGVHFGHGTRKWNPRMAP 33 >gi|310772047|emb|CBH31161.1| 40S RIBOSOMAL PROTEIN SA or P40 [Anncaliia algerae] Length = 121 Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 5/107 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER--NNTHIIDLSQTVPMLQKALQV 58 +A+P ++ ++ + + K +YI+ R NN II++ + + A + Sbjct: 6 LAIPDEYVQAIILCNAHLAAQTCSVHFK--KYIYERRKDNNMFIINIDKMWQKIILAARA 63 Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN 105 I+ + K+ V++ + + ++ G TN Sbjct: 64 FVSI-KNPSDIVVTSNKTFGRRAVLKFCEETGATPATGRFTPGSFTN 109 >gi|8574675|gb|AAF77653.1|AF193920_1 mitochondrial protein [Schisandra sphenanthera] gi|8574677|gb|AAF77654.1|AF193921_1 mitochondrial protein [Kadsura japonica] Length = 110 Score = 51.9 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 32/139 (23%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV T S + + + A R + +G TN + + Sbjct: 1 ACHFIGSLIRQKGRSFFVNTNSLFDEIMEKMATRIGCINDSQWRIGVFFTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++D +R+ I Sbjct: 61 RKKKIHFGSNQQ--------------------------------PDCVVIMDADRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN 193 EA R +IPIV+ VD+N Sbjct: 89 LEADRSQIPIVSSVDSNIP 107 >gi|119628689|gb|EAX08284.1| hCG31107, isoform CRA_a [Homo sapiens] Length = 156 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 6/93 (6%) Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI--DGIARQHS--YMGADTKSAGE 242 + T+S VD IP N+ +RS+ L ++A + G + + D + Sbjct: 8 LCVTDSPLRYVDIAIPCNNKGARSVGLMWWMLAREVLRMRGTISREHPWEVMTDLYFYRD 67 Query: 243 TVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275 KE E + + E G+ A PE Sbjct: 68 PEEIEKEEQAAAEKAVTKEE--FQGEWTAPAPE 98 >gi|297287889|ref|XP_001109586.2| PREDICTED: 40S ribosomal protein S0-like [Macaca mulatta] Length = 369 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 4/94 (4%) Query: 12 LESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRIL 70 L +G G N ++ ME+YI+ + + +I++L +T L A I + + Sbjct: 19 LAAGTHLGSTNLDFH--MEQYIYKRKSDGIYILNLKRTWEKLLLAACAIV-AIENLTDVS 75 Query: 71 FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMT 104 ++++ V+ A + ++ + G T Sbjct: 76 VTSSRNTGQRAVLTFAAAAGAIPISGHFTSGTFT 109 >gi|119611478|gb|EAW91072.1| centrosomal protein 350kDa, isoform CRA_c [Homo sapiens] Length = 313 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 173 AIQE--ARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 A +E + +P +A+ +T S VD IP N+ + S+ L ++A + Sbjct: 217 AFREPWLVVVNLPTIALCNTESPLRCVDIAIPCNNKEAHSVGLIWWVLAREVL 269 >gi|161899531|ref|XP_001712991.1| ribosomal RNA S0 [Bigelowiella natans] gi|75756486|gb|ABA27379.1| ribosomal RNA S0 [Bigelowiella natans] Length = 211 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 158 LPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDL 217 LP+ V + + I+E + IPI+ + +T++N +D+V+P N +S S A+ L Sbjct: 110 LPEAAIVAEPKNDPRIIRELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIFYL 169 Query: 218 VAS 220 + Sbjct: 170 IGR 172 >gi|195564611|ref|XP_002105908.1| stubarista [Drosophila simulans] gi|194203273|gb|EDX16849.1| stubarista [Drosophila simulans] Length = 133 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 ++L + I ++L + G N N +ME+Y++ R + +I++L +T LQ A + I Sbjct: 8 LSLKEDDITKMLVATTHLGSENV--NFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAI 65 >gi|2500391|sp|Q40606|RR2_OCHNE RecName: Full=30S ribosomal protein S2, chloroplastic gi|1430909|emb|CAA67534.1| S2 ribosomal protein [Ochrosphaera neapolitana] Length = 34 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%) Query: 195 DLVDYVIPGNDDSSRSIALFCDLVASAAIDGIA 227 +LVD IP NDD+ +SI L +++ G + Sbjct: 1 NLVDIPIPANDDAIKSIKLIVSKLSTGIQQGQS 33 >gi|147810890|emb|CAN69492.1| hypothetical protein VITISV_042288 [Vitis vinifera] Length = 623 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 49 VPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT 108 V M QKA ++ D +RG + L V TK +A D V A ++ + V K LGG + + Sbjct: 15 VKMGQKACDLVFDAASRGKQFLIVGTKDKA-DSVARTAIKARCHYVYKKCLGGPLVHGSN 73 Query: 109 VSQSI 113 Q I Sbjct: 74 QYQII 78 >gi|297291064|ref|XP_002803847.1| PREDICTED: 40S ribosomal protein SA-like [Macaca mulatta] Length = 204 Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 46/108 (42%), Gaps = 6/108 (5%) Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKA-LQVIS 60 + + + + L + G L + +M++YI+ ++ + +II+L +T A ++ Sbjct: 1 MEEEDVLKFLAAETHLG-GTNL-DFQMKQYIYKKKCDGVYIINLKRTWGKFLLATCAIV- 57 Query: 61 DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKT 108 + + + +++ +++ A + + + G+ TN Sbjct: 58 -AIENPADVCVIFSRNSGQRAMLKFAAVTGAIPIAGCFTLGVFTNQIQ 104 Score = 38.8 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 2/88 (2%) Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKS 239 + + +A +T+S V+ IP S+ L ++A + + S + Sbjct: 115 VNLHTIAPCNTDSPLCYVEIAIPCK-KGVHSVGLIWWMLARELLH-MCGTISCEHLWEEI 172 Query: 240 AGETVVHSKEGMQLEEDSQSSESSVLDG 267 E + EE + + ++ + Sbjct: 173 PDLFFYRDAEETEKEEQAAAEKAVTKEE 200 >gi|149018242|gb|EDL76883.1| rCG25653, isoform CRA_f [Rattus norvegicus] Length = 141 Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDT 62 Sbjct: 66 KAV 68 >gi|73989784|ref|XP_860547.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) isoform 8 [Canis familiaris] Length = 213 Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKS--QASDCV 82 + + +++++ Q + V Sbjct: 66 V-AIENPADVSVISSRNTGQGAHSV 89 >gi|8574687|gb|AAF77659.1|AF193926_1 mitochondrial protein [Austrobaileya scandens] Length = 109 Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 36/138 (26%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNS-KW-LGGMMTNWKTVSQS 112 A I + + GR FV T S + + + A R C+N KW +GG +TN + + Sbjct: 1 ACHFIGSPIRQKGRFFFVNTNSLFDEIMEQMATRIG--CINDDKWRIGGFLTNCSSPKKI 58 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 + + + N++ PD + ++D +R+ Sbjct: 59 RSRKKKINFGSNQQ--------------------------------PDCVVIMDADRKSS 86 Query: 173 AIQEARRLRIPIVAVVDT 190 I EA R +IPIV+ VD+ Sbjct: 87 VILEADRSQIPIVSSVDS 104 >gi|73989782|ref|XP_860518.1| PREDICTED: similar to laminin receptor 1 (ribosomal protein SA) isoform 7 [Canis familiaris] Length = 87 Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVI 59 + + + + + L +G G L + +ME+YI+ + + +II+L +T L A + I Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65 Query: 60 SDTVARGGRILFVATKS 76 + + +++++ Sbjct: 66 V-AIENPADVSVISSRN 81 >gi|255022910|ref|ZP_05294896.1| hypothetical protein LmonocyFSL_04380 [Listeria monocytogenes FSL J1-208] Length = 22 Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 16/22 (72%) Query: 3 LPQFTIRQLLESGVQFGHRNFL 24 +P +++QLLE+GV FGH+ Sbjct: 1 MPVISMKQLLEAGVHFGHQTRR 22 >gi|170061987|ref|XP_001866473.1| 40S ribosomal protein sa [Culex quinquefasciatus] gi|167880044|gb|EDS43427.1| 40S ribosomal protein sa [Culex quinquefasciatus] Length = 386 Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 2/115 (1%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ + + + + I + + T+S VD IP N S I L DL Sbjct: 264 PRLLILTIPLTDHQPVTVVSYVNITVFSFCYTDSQLKFVDIAIPCNTKSPHFIKLKPDLF 323 Query: 219 ASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVV 273 + D ++ + + AD A E E ++ ++++ + E+ + Sbjct: 324 --SLRDPEEKKEAALLADASVAKEMYTDEPIPAVEEGGNRMTQANDWNKDEIWIA 376 >gi|224534857|ref|ZP_03675426.1| 30S ribosomal protein S2 [Borrelia spielmanii A14S] gi|224513797|gb|EEF84122.1| 30S ribosomal protein S2 [Borrelia spielmanii A14S] Length = 68 Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 21/28 (75%) Query: 197 VDYVIPGNDDSSRSIALFCDLVASAAID 224 +D IPGNDD+ RS+ALF +++ A ++ Sbjct: 2 IDCPIPGNDDAIRSVALFTKIISDAILE 29 >gi|301787265|ref|XP_002929048.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein SA-like, partial [Ailuropoda melanoleuca] Length = 291 Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 74/233 (31%), Gaps = 60/233 (25%) Query: 2 ALPQFTIRQ-----LLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKA 55 AL +++ L G G L + +ME+YI ++ +I++L +T+ A Sbjct: 4 ALDVLQMKEGDVLXFLVVGTHLG-GTNL-DLQMEQYINKRKSVGLYIMNLKRTLEKFLLA 61 Query: 56 LQ---VISDTVARGGRIL--FVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 + + L + + + + AA G T+ + Sbjct: 62 AHDIVAMGILADQTHIDLATVFSRNTGSXAMLKLAAVXGPAP------TPGCFTSRNFTN 115 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE 170 Q + P + V D+ + Sbjct: 116 QIXVSFWE----------------------------------------PXFLSVTDSRAD 135 Query: 171 KLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 + EA +++ +A+ +T+S VD IP + + S+ L ++A + Sbjct: 136 HQPLTEASFVKLLTIALCNTDSPLLYVDVXIPCKEXA-CSVGLIWWMLAQEVL 187 >gi|77682745|gb|ABB00654.1| stubarista [Drosophila orena] Length = 125 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 20/39 (51%) Query: 186 AVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAID 224 A +T+S +D IP N+ S+ SI L L+A + Sbjct: 1 AFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLR 39 >gi|147777232|emb|CAN59810.1| hypothetical protein VITISV_002457 [Vitis vinifera] Length = 168 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%) Query: 159 PDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLV 218 P L+ + D + I+E IP +A D +S VD I N+ +I L+ Sbjct: 39 PYLLILTDPITDHQPIKEVALGNIPTIAFCDIDSPMRYVDIDILTNNKGKHNIGCLFWLL 98 Query: 219 A 219 Sbjct: 99 T 99 >gi|297721847|ref|NP_001173287.1| Os03g0182600 [Oryza sativa Japonica Group] gi|255674252|dbj|BAH92015.1| Os03g0182600 [Oryza sativa Japonica Group] Length = 100 Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 32 YIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRS 89 Y++ R + +II+L +T LQ A +VI + I+ + + V++ A+ Sbjct: 26 YVYKRRSDGIYIINLGKTWEKLQLAARVIV-AIENPQDIIVQSARPYGQRAVLKFAQYI 83 >gi|8574659|gb|AAF77645.1|AF193912_1 mitochondrial protein [Ceratophyllum demersum] Length = 110 Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 32/139 (23%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114 A I + + GR FV S + + + A + + +G TN + + Sbjct: 1 ACIFIGAPIRQKGRSFFVNRNSLFEEIMAQMATKIGCINDSQWRIGAEFTNCSSPKKIRS 60 Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174 + + + N++ PD + ++DT+R+ I Sbjct: 61 RKKKINFGSNQQ--------------------------------PDCVVLLDTDRKSSVI 88 Query: 175 QEARRLRIPIVAVVDTNSN 193 EA RL+IPI + VD+N Sbjct: 89 LEADRLQIPIASSVDSNIP 107 >gi|218514370|ref|ZP_03511210.1| 30S ribosomal protein S2 [Rhizobium etli 8C-3] Length = 46 Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 27/45 (60%) Query: 210 SIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLE 254 +IAL+C+L++ AAIDGIARQ S G D ++ E V E Sbjct: 1 AIALYCELISRAAIDGIARQQSSSGRDLGASSEVPVEPALEEAAE 45 >gi|11466586|ref|NP_066476.1| ribosomal protein S2 [Rhodomonas salina] gi|10444173|gb|AAG17747.1|AF288090_23 ribosomal protein S2 [Rhodomonas salina] Length = 207 Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 10/135 (7%) Query: 25 WNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 +N K +I ++N + V L + L + + L V K E Sbjct: 33 FNFKNSSFILGKKNKVFFYKADKLVLFLNEILSFYLNFFKSYPKSLLVVDKRLMFLVSKE 92 Query: 85 AAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFT----------KKE 134 A+ RS Q K+ GGM N + + L ++ + KK Sbjct: 93 ASLRSFQGVFFGKYSGGMFNNNIEKYKEYKTLFSKVDMFLFLSIKDPIFSLKELSLLKKP 152 Query: 135 RLNIERKRDKLKRAL 149 + + KL+ L Sbjct: 153 LIVFIEETIKLENYL 167 >gi|255026413|ref|ZP_05298399.1| hypothetical protein LmonocytFSL_08895 [Listeria monocytogenes FSL J2-003] Length = 26 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 16/19 (84%) Query: 3 LPQFTIRQLLESGVQFGHR 21 +P +++QLLE+GV FGH+ Sbjct: 1 MPVISMKQLLEAGVHFGHQ 19 >gi|84508595|ref|YP_448641.1| ribosomal protein S2 [Desmarestia viridis] gi|45925627|gb|AAS79028.1| ribosomal protein S2 [Desmarestia viridis] Length = 214 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 28/45 (62%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVA 73 M Y+ +RN+ + +L +++ ++ +L+V+ + + G ILFV+ Sbjct: 35 MHPYLLGKRNSYYFYNLEKSLYGIRASLEVLKNIIEDNGEILFVS 79 >gi|225418689|ref|ZP_03761878.1| hypothetical protein CLOSTASPAR_05913 [Clostridium asparagiforme DSM 15981] gi|225041779|gb|EEG52025.1| hypothetical protein CLOSTASPAR_05913 [Clostridium asparagiforme DSM 15981] Length = 35 Score = 44.2 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 19/33 (57%) Query: 59 ISDTVARGGRILFVATKSQASDCVMEAAKRSAQ 91 +SD A GG ILFV TK QA + + A+R Sbjct: 1 VSDIAANGGTILFVGTKKQAQEAIKVEAERCGM 33 >gi|145694654|gb|ABP93947.1| laminin receptor precursor [Ovis aries] Length = 59 Score = 44.2 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPML 52 + + + + + L +G G L + +ME+YI+ + + +II+L +T L Sbjct: 8 LQMKEEDVLKFLAAGTHLG-GTNL-DFQMEQYIYKRKSDGIYIINLKRTWEKL 58 >gi|8574671|gb|AAF77651.1|AF193918_1 mitochondrial protein [Cabomba sp. Palmer 688] Length = 111 Score = 44.2 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 35/141 (24%) Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVN-SKW-LGGMMTNWKTVSQS 112 A I + + GR LFV T S + + + A R C+N +W +GG +TN Sbjct: 1 ACHFIGSPIRQKGRSLFVNTNSLFDEIMEQMATRIG--CINDDQWGIGGFLTNCS----- 53 Query: 113 IQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKL 172 + + K K P + ++D +R+ Sbjct: 54 ----------------------WFPKKIRSRKKKIHFG----WNQPPSCVVIMDADRKSS 87 Query: 173 AIQEARRLRIPIVAVVDTNSN 193 I EA R +IPI + VD+ Sbjct: 88 VILEADRSQIPIASSVDSKIP 108 >gi|268164037|ref|YP_003288802.1| ribosomal protein S2 [Saccharina angustata] gi|262318347|dbj|BAI48667.1| ribosomal protein S2 [Saccharina angustata] Length = 213 Score = 43.4 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 26/48 (54%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 M Y+ +RN + +L +++ ++ L+V+ + G+ILFV+ Sbjct: 35 MHPYLLGKRNIYYFYNLEKSLYGIRATLEVLKKIILSEGKILFVSDYP 82 >gi|268053532|ref|YP_003288891.1| ribosomal protein S2 [Saccharina japonica] gi|268053571|ref|YP_003288929.1| ribosomal protein S2 [Saccharina religiosa] gi|268053610|ref|YP_003288967.1| ribosomal protein S2 [Saccharina ochotensis] gi|268053649|ref|YP_003289044.1| ribosomal protein S2 [Saccharina diabolica] gi|268053688|ref|YP_003289095.1| ribosomal protein S2 [Saccharina longipedalis] gi|262318152|dbj|BAI48477.1| ribosomal protein S2 [Saccharina japonica] gi|262318191|dbj|BAI48515.1| ribosomal protein S2 [Saccharina religiosa] gi|262318230|dbj|BAI48553.1| ribosomal protein S2 [Saccharina ochotensis] gi|262318269|dbj|BAI48591.1| ribosomal protein S2 [Saccharina diabolica] gi|262318308|dbj|BAI48629.1| ribosomal protein S2 [Saccharina longipedalis] Length = 213 Score = 43.4 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 26/48 (54%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 M Y+ +RN + +L +++ ++ L+V+ + G+ILFV+ Sbjct: 35 MHPYLLGKRNIYYFYNLEKSLYGIRATLEVLKKIILSEGKILFVSDYP 82 >gi|146331718|gb|ABQ22365.1| mitochondrial 28S ribosomal protein S2-like protein [Callithrix jacchus] Length = 64 Score = 43.4 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 198 DYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 Y +PGNDDS ++ L+C L + ++ Sbjct: 1 TYPVPGNDDSPPAVHLYCRLFRTTITRAKEKRRQ 34 >gi|268164076|ref|YP_003288853.1| ribosomal protein S2 [Saccharina coriacea] gi|262318386|dbj|BAI48705.1| ribosomal protein S2 [Saccharina coriacea] Length = 213 Score = 43.4 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 26/48 (54%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 M Y+ +RN + +L +++ ++ L+V+ + G+ILFV+ Sbjct: 35 MHPYLLGKRNIYYFYNLEKSLYGIRATLEVLKKIILSEGKILFVSDSP 82 >gi|21449990|ref|NP_659252.1| ribosomal protein S2 [Laminaria digitata] gi|21425315|emb|CAC87948.1| ribosomal protein S2 [Laminaria digitata] Length = 210 Score = 42.3 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 28/50 (56%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQA 78 M Y+ +RN + +L +++ ++ L+++ T++ G+ILFV+ Sbjct: 35 MHPYLLGKRNIYYFYNLEKSLYGIRSTLEILKKTISAEGKILFVSDSPLF 84 >gi|148705022|gb|EDL36969.1| mCG17801 [Mus musculus] Length = 214 Score = 42.3 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 32/109 (29%), Gaps = 24/109 (22%) Query: 190 TNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI------------------------DG 225 + S VD IP N+ + S+ L ++A + +G Sbjct: 89 SQSPLRYVDIAIPCNNKGAYSVGLMWWMLAREVLCMRGTISREHPWEVMPYLYFYRDPEG 148 Query: 226 IARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVP 274 I ++ + E +Q + +G +V VP Sbjct: 149 IEKEERAAAEKAVTKEEFQSEWTAPAPEFTAAQPEVADWSEGMQVPSVP 197 Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%) Query: 192 SNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 S VD IP N+ + S+ L ++A + Sbjct: 51 SPLRYVDIAIPCNNKGAYSVGLMWWMLAREVL 82 >gi|307183729|gb|EFN70404.1| hypothetical protein EAG_02334 [Camponotus floridanus] Length = 33 Score = 42.3 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 189 DTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAI 223 DTN NP+L+ Y P N DS +I L+ L A + Sbjct: 1 DTNCNPNLIIY--PENHDSLCAIELYYSLFKKAIV 33 >gi|324556443|gb|ADY49810.1| 40S ribosomal protein SA [Ascaris suum] Length = 96 Score = 41.9 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 10 QLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPML 52 +LL G + +ME+Y++ R + THII L +T L Sbjct: 2 KLLACQTHIG--ASNCDFQMEQYVWKRRPDGTHIIYLKKTWEKL 43 >gi|115764716|ref|XP_796498.2| PREDICTED: similar to 34/67 kD laminin binding protein [Strongylocentrotus purpuratus] Length = 220 Score = 41.9 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQK 54 +AL + +++ L SG G + + KM YI+ + + +I + ML + Sbjct: 8 LALKEDDVQKFLASGAHIG--SSNMDYKMAPYIYKRKPDGNIHSIGLMWWMLSR 59 >gi|291411931|ref|XP_002722242.1| PREDICTED: ribosomal protein SA-like [Oryctolagus cuniculus] Length = 200 Score = 41.9 bits (97), Expect = 0.095, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 8/73 (10%) Query: 152 IRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSI 211 I++ P L+ V D ++ + EA + + +A +T+S N + S+ Sbjct: 103 IQEAFREPWLLVVTDPRADRQTLTEAPYVNLLTIARCNTHSPL--------CNSKGAHSV 154 Query: 212 ALFCDLVASAAID 224 L C ++A + Sbjct: 155 GLMCRMLAREVLR 167 >gi|325278098|ref|ZP_08143613.1| hypothetical protein G1E_30507 [Pseudomonas sp. TJI-51] gi|324096764|gb|EGB95095.1| hypothetical protein G1E_30507 [Pseudomonas sp. TJI-51] Length = 20 Score = 41.9 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 14/20 (70%) Query: 3 LPQFTIRQLLESGVQFGHRN 22 + Q +R +L++GV FGH+ Sbjct: 1 MSQVNMRDMLKAGVHFGHQT 20 >gi|119583413|gb|EAW63009.1| hCG1644348, isoform CRA_b [Homo sapiens] Length = 144 Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 22/46 (47%) Query: 174 IQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVA 219 + +A +P +A+ T+S VD IP N+ S+ L + A Sbjct: 67 LTQASYTNLPTIALGHTDSPLCCVDIAIPCNNKRGPSVGLTWWMPA 112 >gi|152980864|ref|YP_001353850.1| sporulation related protein [Janthinobacterium sp. Marseille] gi|151280941|gb|ABR89351.1| sporulation related protein [Janthinobacterium sp. Marseille] Length = 282 Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 2/105 (1%) Query: 172 LAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHS 231 +A+ A + +P++ + PD +D IP D + + LVA A D A +++ Sbjct: 63 IALVLAAVIGLPMILDSEPRQLPDDIDIQIPSKDTPAPAAQAKAGLVAKA--DTSAARNA 120 Query: 232 YMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 + E + +++ +E + + ++ A V + Sbjct: 121 LSAEEEIVEPEAPAPVVAPKETPKETVKAEPKLAETEKKAPVASV 165 >gi|224532941|ref|ZP_03673551.1| 30S ribosomal protein S2 [Borrelia burgdorferi WI91-23] gi|224512140|gb|EEF82531.1| 30S ribosomal protein S2 [Borrelia burgdorferi WI91-23] Length = 60 Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 202 PGNDDSSRSIALFCDLVASAAIDGIAR---QHSYMGADTKSAGETVVHSKEGMQLEEDSQ 258 PGNDD+ RS+ALF +++ A ++ Q + E + + + +EE + Sbjct: 1 PGNDDAIRSVALFTKIISDAILESDKEVGIQIIENLNEEDLMKEIEIKNDKSDSIEERGE 60 >gi|15150717|ref|NP_150383.1| ribosomal protein S2 [Pylaiella littoralis] gi|15147723|emb|CAC50824.1| ribosomal protein S2 [Pylaiella littoralis] Length = 203 Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 28/46 (60%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVAT 74 M Y+ +RNN + +L +++ ++ L+V + VA+ G+IL ++ Sbjct: 35 MHCYLLGKRNNFYFYNLEKSLYGIRATLEVFKNIVAKEGKILLISN 80 >gi|324309733|gb|ADY18514.1| ribosomal protein S2 [Phaeodactylum tricornutum] Length = 245 Score = 40.4 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 61/162 (37%), Gaps = 26/162 (16%) Query: 43 IDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSK-WLGG 101 + + T ++KAL VI RILFV T S A + + K + ++ W G Sbjct: 32 LKIEDTEYRIKKALHVIYKYHKHNKRILFVGTPSNAHKEIKQLLKETKHVLISESIWTNG 91 Query: 102 MMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDL 161 +TN + K ++ + + E I + DL Sbjct: 92 CITNQDASFDPLLKSQNPADKIRAEI------------------------IFQLRKKSDL 127 Query: 162 MFVVDTNREKLAIQEARRLRIPIVAV-VDTNSNPDLVDYVIP 202 + +++ + + A++E + PI+++ + N Y +P Sbjct: 128 IVILNVLKNRDALKEGYLSKTPIISLGCELNVLEKKSTYKVP 169 >gi|170065096|ref|XP_001867798.1| 40S ribosomal protein S0-B [Culex quinquefasciatus] gi|167882220|gb|EDS45603.1| 40S ribosomal protein S0-B [Culex quinquefasciatus] Length = 218 Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 26 NPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVME 84 N +ME Y+F R + HI+ L +T L A++ I + +++ V+ Sbjct: 23 NFQMESYVFKLRPDGIHIVILGRTWEKLLLAMRCIVSI-EYPDEVFAFSSRQFGKRFVLR 81 Query: 85 AAKRSAQYCVNSKWL 99 + + ++ Sbjct: 82 FGNYTESAHIAGRFT 96 >gi|150018598|ref|YP_001310852.1| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905063|gb|ABR35896.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Clostridium beijerinckii NCIMB 8052] Length = 485 Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 43/184 (23%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKR 88 M+ Y E+N +I++ + + Q ++D + G +LF+A D + E A++ Sbjct: 310 MKEY---EKNGLDLINVVTSNISMDDFKQEMNDLIKNGNDVLFIA------DSIEELAEK 360 Query: 89 SAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKR- 147 + + + +++++ + + + K + + K LK Sbjct: 361 TG-------------IDKEGLAKTLNDYNECCKSTDTLFNKNPKYLKPLVGPKFYALKFA 407 Query: 148 -----ALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTN--SNPDLVDYV 200 +L GI+ ++ E + ++ + D N NPD V +V Sbjct: 408 PSAYGSLGGIK-----------INYKTEVIDTEDKVIPGLFAAG-TDANSICNPDYV-FV 454 Query: 201 IPGN 204 +PGN Sbjct: 455 LPGN 458 >gi|386857|gb|AAA36165.1| laminin receptor [Homo sapiens] Length = 135 Score = 39.6 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 6/79 (7%) Query: 201 IPGNDDSSRSIALFCDLVASAAI--DGIARQHSYMGA--DTKSAGETVVHSKEGMQLEED 256 IP N+ + S+ L ++A + G + D + KE E Sbjct: 1 IPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEK 60 Query: 257 SQSSESSVLDGQEVAVVPE 275 + + E G+ A PE Sbjct: 61 AVTKEE--FQGEWTAPAPE 77 >gi|302695955|ref|XP_003037656.1| hypothetical protein SCHCODRAFT_231909 [Schizophyllum commune H4-8] gi|300111353|gb|EFJ02754.1| hypothetical protein SCHCODRAFT_231909 [Schizophyllum commune H4-8] Length = 582 Score = 39.6 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 18/127 (14%) Query: 150 DGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSR 209 G+R + GLP EA + + D + NP +D P DD Sbjct: 238 GGVRKLKGLP---IHPSPLAGHWTTNEAADTGMSM----DMDENP-FIDGP-PREDD--- 285 Query: 210 SIALFCDLVASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQE 269 +++ G++ + T + G EE + + ++ D + Sbjct: 286 ------NVMDDGIAGGLSTIYEEDEGQTTHDKASSAEEPMGSPAEEVTPAEDAPPQDAND 339 Query: 270 VAVVPEL 276 A VP Sbjct: 340 SAYVPRA 346 >gi|84508555|ref|YP_448602.1| ribosomal protein S2 [Fucus vesiculosus] gi|39653278|gb|AAR29297.1| ribosomal protein S2 [Fucus vesiculosus] Length = 194 Score = 39.2 bits (90), Expect = 0.67, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 28/48 (58%) Query: 29 MERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKS 76 M Y+ +R+ + +L +++ ++ L+V+ + + +GG ILFV+ Sbjct: 35 MHSYVLGKRSVYYFYNLEKSLYGIRATLEVLENLIGQGGDILFVSDSP 82 >gi|74325179|ref|YP_316599.1| ribosomal protein S2 [Thalassiosira pseudonana] gi|74100245|gb|AAZ99406.1| ribosomal protein S2 [Thalassiosira pseudonana] Length = 216 Score = 38.8 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 60/196 (30%), Gaps = 49/196 (25%) Query: 33 IFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQY 92 I NN L Q L++ L++I + +ILF+ V + + + Sbjct: 32 ISTFSNNV----LEQIEAYLKQVLKIIFEYHMYQFKILFIG-----FPVVSKLKQMRLMH 82 Query: 93 CVNS------KWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLK 146 N W+ G+ N ++ + + Sbjct: 83 FTNHDFISEKSWISGIFRNRFSILTYLT------------------------LIQSQNFS 118 Query: 147 RALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNP---DLVDYVIPG 203 + L + + P L+ V + E I E + IPI++ N P + Y G Sbjct: 119 KNLKLLLSVKTKPHLVVVFNQKVETNVINEFYKAGIPILSF---NCKPLNMPKITYKTLG 175 Query: 204 NDD----SSRSIALFC 215 N + R+ F Sbjct: 176 NFKFVETNLRTAYFFL 191 >gi|159481875|ref|XP_001699000.1| hypothetical protein CHLREDRAFT_152112 [Chlamydomonas reinhardtii] gi|158273263|gb|EDO99054.1| predicted protein [Chlamydomonas reinhardtii] Length = 454 Score = 38.8 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 25/45 (55%) Query: 157 GLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVI 201 P L+ V+D + A++EA +P VA+++ +S+ V + + Sbjct: 287 RQPALVVVLDLSYGGEAVREAAARNVPTVALLNGHSDASAVTFPV 331 >gi|50543726|ref|XP_500029.1| YALI0A13101p [Yarrowia lipolytica] gi|49645894|emb|CAG83958.1| YALI0A13101p [Yarrowia lipolytica] Length = 867 Score = 38.8 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 218 VASAAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPELM 277 +A AA G+ S + + ET SKE E S + D EVA E Sbjct: 786 MADAAAKGVTEATSAVESKETKEAETAAESKEAEVAESKEAESAAEPKD-AEVAESKEAE 844 Query: 278 S 278 S Sbjct: 845 S 845 >gi|146338779|ref|YP_001203827.1| putative TRAP-type C4-dicarboxylate transport system binding periplasmic protein DctP [Bradyrhizobium sp. ORS278] gi|146191585|emb|CAL75590.1| putative TRAP-type C4-dicarboxylate transport system, periplasmic component (dctP-like) [Bradyrhizobium sp. ORS278] Length = 340 Score = 38.4 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 9/101 (8%) Query: 52 LQKALQVIS-DTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVS 110 L +A + L + ++ + V + + N W G + + + Sbjct: 202 LSEAYSALQTKIADGQENPLALIESAKFYE-VQKFCSLT-----NHSWDGFWLLSSGKIW 255 Query: 111 QSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDG 151 ++I +D+++LL KK+R +I + L+++L+G Sbjct: 256 KTIP--QDVQKLLQTTFNAAAKKQRADIVQANADLQKSLEG 294 >gi|226941659|ref|YP_002796733.1| hypothetical protein LHK_02743 [Laribacter hongkongensis HLHK9] gi|226716586|gb|ACO75724.1| hypothetical protein LHK_02743 [Laribacter hongkongensis HLHK9] Length = 268 Score = 38.4 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 24/162 (14%) Query: 107 KTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVD 166 S+ ++ E+ + ++RLN+ +++ KL R L M GLP Sbjct: 37 SEQRDSMTRMLSQARQQADESTKASARQRLNLLKEQVKLMRTL-----MAGLPPKQQKAM 91 Query: 167 TNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGI 226 + K QE ++L +DT G D+ ++L +A+A G Sbjct: 92 AAQLKQMAQELKQLARQ----LDT------------GGGDAGVDVSLSTGGLAAA---GR 132 Query: 227 ARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQ 268 + G D +A E + E Q E S ++ + Sbjct: 133 NEAGAAEGEDASAAAEAQQLASEARQAEAASTDDGTAADEEA 174 >gi|249677|gb|AAB22222.1| ribosomal protein S 2=McrC fraction IV 27-kda protein [Escherichia coli, K-12, Peptide Plasmid Partial, 19 aa] Length = 19 Score = 38.4 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 12/19 (63%) Query: 4 PQFTIRQLLESGVQFGHRN 22 ++ +L++GV FGH+ Sbjct: 1 ATVSMXDMLKAGVHFGHQT 19 >gi|309399073|gb|ADO78810.1| cytochrome cd1-containing nitrite reductase [uncultured organism] Length = 291 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQT--VPMLQKALQVISDTVARGGRIL 70 ++ G +PK +I L T V ++A +V+ + GG L Sbjct: 120 KARPHPGRGANFVHPKFGPVWATSHLGADVISLIGTDPVKHPKEAWKVVQELKNHGGGSL 179 Query: 71 FVATKSQASDCVMEA 85 FV T ++++ +A Sbjct: 180 FVKTHPKSTNLWADA 194 >gi|62390899|ref|YP_226301.1| Signal recognition particle GTPase [Corynebacterium glutamicum ATCC 13032] gi|41326238|emb|CAF20400.1| Signal recognition particle GTPase [Corynebacterium glutamicum ATCC 13032] Length = 576 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 25/56 (44%) Query: 221 AAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 A ++ A + + E ++E +EE + + E +V++ VA VPE Sbjct: 162 AVVEEPAVAEEPAIVEEPAVAEEPAVAEEPAIVEEPAVAEEPAVVEEPAVAEVPET 217 >gi|309399068|gb|ADO78808.1| cytochrome cd1-containing nitrite reductase [uncultured organism] gi|309399075|gb|ADO78811.1| cytochrome cd1-containing nitrite reductase [uncultured organism] gi|309399116|gb|ADO78829.1| cytochrome cd1-containing nitrite reductase [uncultured organism] gi|309399142|gb|ADO78840.1| cytochrome cd1-containing nitrite reductase [uncultured organism] Length = 291 Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQT--VPMLQKALQVISDTVARGGRIL 70 ++ G +PK +I L T V ++A +V+ + GG L Sbjct: 120 KARPHPGRGANFVHPKFGPVWATSHLGADVISLIGTDPVKHPKEAWKVVQELKNHGGGSL 179 Query: 71 FVATKSQASDCVMEA 85 FV T ++++ +A Sbjct: 180 FVKTHPKSTNLWADA 194 >gi|309399103|gb|ADO78823.1| cytochrome cd1-containing nitrite reductase [uncultured organism] Length = 291 Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQT--VPMLQKALQVISDTVARGGRIL 70 ++ G +PK +I L T V ++A +V+ + GG L Sbjct: 120 KARPHPGRGANFVHPKFGPVWATSHLGADVISLIGTDPVKHPKEAWKVVQELKNHGGGSL 179 Query: 71 FVATKSQASDCVMEA 85 FV T ++++ +A Sbjct: 180 FVKTHPKSTNLWADA 194 >gi|19553263|ref|NP_601265.1| signal recognition particle GTPase [Corynebacterium glutamicum ATCC 13032] Length = 582 Score = 37.3 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%) Query: 221 AAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 A + A A+ + E ++E +EE + + E +V++ VA VPE Sbjct: 168 AVAEEPAIVEEPAVAEEPAVAEEPAVAEEPAIVEEPAVAEEPAVVEEPAVAEVPET 223 >gi|119583412|gb|EAW63008.1| hCG1644348, isoform CRA_a [Homo sapiens] Length = 175 Score = 37.3 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 1 MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPML 52 + + + + + L +G G + + ++E+YI + + I++L +T L Sbjct: 8 LNMKEEDVLKFLAAGTHLG-GTKI-DFQVEQYICKRKSDGICILNLKRTWEKL 58 >gi|21324832|dbj|BAB99455.1| Signal recognition particle GTPase [Corynebacterium glutamicum ATCC 13032] Length = 510 Score = 37.3 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%) Query: 221 AAIDGIARQHSYMGADTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPEL 276 A + A A+ + E ++E +EE + + E +V++ VA VPE Sbjct: 96 AVAEEPAIVEEPAVAEEPAVAEEPAVAEEPAIVEEPAVAEEPAVVEEPAVAEVPET 151 >gi|309399123|gb|ADO78832.1| cytochrome cd1-containing nitrite reductase [uncultured organism] Length = 291 Score = 37.3 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQT--VPMLQKALQVISDTVARGGRIL 70 ++ G +PK+ +I L T V ++A +V+ + GG L Sbjct: 120 KARPHPGRGANFVHPKLGPVWATSHLGADVISLIGTDPVKHPKEAWKVVQELKNHGGGSL 179 Query: 71 FVATKSQASDCVMEA 85 FV T ++++ +A Sbjct: 180 FVKTHPKSTNLWADA 194 >gi|330375516|gb|AEC13004.1| putative dissimilatory reductase [uncultured bacterium] gi|330375518|gb|AEC13005.1| putative dissimilatory reductase [uncultured bacterium] Length = 291 Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQT--VPMLQKALQVISDTVARGGRIL 70 ++ G +PK +I L T ++A +V+++ GG L Sbjct: 120 KARPHPGRGANFVHPKFGPVWATSHLGADVISLIGTDPAKHPKEAWKVVAELKNHGGGSL 179 Query: 71 FVATKSQASDCVMEA 85 FV T ++ + +A Sbjct: 180 FVKTHPKSKNLWADA 194 >gi|330375562|gb|AEC13027.1| putative dissimilatory reductase [uncultured bacterium] Length = 291 Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQT--VPMLQKALQVISDTVARGGRIL 70 ++ G +PK +I L T ++A +V+++ GG L Sbjct: 120 KARPHPGRGANFVHPKFGPVWATSHLGADVISLIGTDPAKHPKEAWKVVAELKNHGGGSL 179 Query: 71 FVATKSQASDCVMEA 85 FV T ++ + +A Sbjct: 180 FVKTHPKSKNLWADA 194 >gi|253576032|ref|ZP_04853365.1| transposase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844607|gb|EES72622.1| transposase [Paenibacillus sp. oral taxon 786 str. D14] Length = 366 Score = 36.5 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 2/80 (2%) Query: 44 DLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMM 103 L T+ +A IS + + V E SAQ V + +G + Sbjct: 30 KLLDTMKRFNEACNYISKVSFESKTFGKIGIQKLCYYDVRERFGLSAQLVV--RSIGKVA 87 Query: 104 TNWKTVSQSIQKLRDLEELL 123 ++KT +S+ R+ ++ Sbjct: 88 ESYKTERKSVHAFREFGAVV 107 >gi|195611246|gb|ACG27453.1| hypothetical protein [Zea mays] Length = 68 Score = 36.5 bits (83), Expect = 4.6, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCER 37 I+ +L + V G +N + +MERY+F R Sbjct: 20 IQMMLAADVHLGTKN--CDFQMERYVFKRR 47 >gi|330375370|gb|AEC12931.1| putative dissimilatory reductase [uncultured bacterium] Length = 292 Score = 36.1 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 13 ESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQT--VPMLQKALQVISDTVARGGRIL 70 ++ G +PK +I L T ++A +V+++ GG L Sbjct: 121 KARPHPGRGANFVHPKFGPVWATSHLGADVISLIGTDPAKHPKQAWKVVAELKNHGGGSL 180 Query: 71 FVATKSQASDCVMEA 85 FV T ++S+ +A Sbjct: 181 FVKTHPKSSNLWADA 195 >gi|146302080|ref|YP_001196671.1| phage integrase family protein [Flavobacterium johnsoniae UW101] gi|146156498|gb|ABQ07352.1| phage integrase family protein [Flavobacterium johnsoniae UW101] Length = 435 Score = 36.1 bits (82), Expect = 6.0, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 13/139 (9%) Query: 49 VPMLQKALQVISD-----TVARGGRILFVATKSQASDCVMEAAKRSAQYC-----VNSKW 98 VP+L +AL+++ + G +L V++ + ++ + E A + + Sbjct: 293 VPLLPQALKIVEKYKEHPLCIQRGTVLPVSSNQKMNEYLKEVAVLCGFPFTLNTHMARRT 352 Query: 99 LGGMMT-NWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGG 157 G +T N +++L + E T E+ I R+ L + L+ Sbjct: 353 FGSTVTLNNNVPINVVKELLGHASVKQTEAYAIT--EQATIGREMSILNKKLNKTGSKMS 410 Query: 158 LPDLMFVVDTNREKLAIQE 176 PDL + +E AI++ Sbjct: 411 KPDLAVLSRLEKEIQAIKK 429 >gi|218678964|ref|ZP_03526861.1| hypothetical protein RetlC8_08799 [Rhizobium etli CIAT 894] Length = 40 Score = 36.1 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 16/27 (59%), Positives = 24/27 (88%) Query: 164 VVDTNREKLAIQEARRLRIPIVAVVDT 190 +DTN+EK+AI EA+RL IP+VA++D+ Sbjct: 1 FIDTNKEKIAIDEAKRLGIPVVAIIDS 27 >gi|14028393|dbj|BAB54954.1| mitochondrial ribosomal protein S2 [Homo sapiens] Length = 22 Score = 35.4 bits (80), Expect = 9.6, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 29 MERYIFCERNNTHIIDLSQTV 49 ME YIF R + IIDL QT Sbjct: 1 MEPYIFGSRLDHDIIDLEQTA 21 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.140 0.414 Lambda K H 0.267 0.0426 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,816,197,282 Number of Sequences: 14124377 Number of extensions: 191933752 Number of successful extensions: 624961 Number of sequences better than 10.0: 3949 Number of HSP's better than 10.0 without gapping: 7016 Number of HSP's successfully gapped in prelim test: 241 Number of HSP's that attempted gapping in prelim test: 609569 Number of HSP's gapped (non-prelim): 9750 length of query: 278 length of database: 4,842,793,630 effective HSP length: 137 effective length of query: 141 effective length of database: 2,907,753,981 effective search space: 409993311321 effective search space used: 409993311321 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 80 (35.4 bits)