PSIBLAST alignment of GI: 254780779 and protein with PDB id: 1vi6
>gi|40889982|pdb|1VI6|A Chain A, Crystal Structure Of Ribosomal Protein S2p Length = 208
>gi|40889983|pdb|1VI6|B Chain B, Crystal Structure Of Ribosomal Protein S2p Length = 208
>gi|40889984|pdb|1VI6|C Chain C, Crystal Structure Of Ribosomal Protein S2p Length = 208
>gi|40889985|pdb|1VI6|D Chain D, Crystal Structure Of Ribosomal Protein S2p Length = 208
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 55/248 (22%)
Query: 1 MALPQ-----FTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQK 54
M+L + L +GV G + + M+++IF R + +++D+ + ++
Sbjct: 1 MSLEKEYEYLVPPDDYLAAGVHIGTQIKTGD--MKKFIFKVRQDGLYVLDIRKLDERIRV 58
Query: 55 ALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQ 114
A + +S +IL VA + A V +K + +++ G +TN
Sbjct: 59 AAKFLSRY--EPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPMLSEY--- 113
Query: 115 KLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAI 174
P+++FV D +K A+
Sbjct: 114 ------------------------------------------REPEVVFVNDPAIDKQAV 131
Query: 175 QEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMG 234
EA + IP+VA+ D+N++ VD VIP N+ R++A+ L+A + +Y
Sbjct: 132 SEATAVGIPVVALCDSNNSSADVDLVIPTNNKGRRALAIVYWLLAREIAKIRGQDFTYSI 191
Query: 235 ADTKSAGE 242
D ++ E
Sbjct: 192 EDFEAELE 199