PSIBLAST alignment of GI: 254780779 and protein with PDB id: 1vs5

gi|116666568|pdb|1VS5|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 241
>gi|116666620|pdb|1VS7|B Chain B, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 241
 Score =  243 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 112/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%)

Query: 3   LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62
           +   ++R +L++GV FGH+   WNPKM+ +IF  RN  HII+L +TVPM  +AL  ++  
Sbjct: 1   MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60

Query: 63  VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE-E 121
            +R G+ILFV TK  AS+ V +AA    Q+ VN +WLGGM+TNWKTV QSI++L+DLE +
Sbjct: 61  ASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120

Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181
             +      TKKE L   R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA  L 
Sbjct: 121 SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180

Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241
           IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+   VA+   +G ++  +    ++    
Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEA 240

Query: 242 E 242
           E
Sbjct: 241 E 241