PSIBLAST alignment of GI: 254780779 and protein with PDB id: 2zkq

gi|187609256|pdb|2ZKQ|BB Chain b, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 295

 Score =  130 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 96/276 (34%), Gaps = 51/276 (18%)

Query: 3   LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61
           + +  + + L +G   G      + +ME+YI+  + +  +II+L +T   L  A + I  
Sbjct: 10  MKEEDVLKFLAAGTHLG-GT-NLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67

Query: 62  TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121
            +     +  +++++     V++ A  +    +  ++  G  TN                
Sbjct: 68  -IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ--------------- 111

Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181
                                         I+     P L+ V D   +   + EA  + 
Sbjct: 112 ------------------------------IQAAFREPRLLVVTDPRADHQPLTEASYVN 141

Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTKSAG 241
           +P +A+ +T+S    VD  IP N+  + S+ L   ++A   +            +     
Sbjct: 142 LPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDL 201

Query: 242 ETVVHSKEGMQLEEDSQSSESSVLD--GQEVAVVPE 275
                 +E  + E+ +     +  +  G+  A  PE
Sbjct: 202 YFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPE 237