PSIBLAST alignment of GI: 254780779 and protein with PDB id: 3jyv
>gi|281500808|pdb|3JYV|B Chain B, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 193
Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 83/227 (36%), Gaps = 61/227 (26%)
Query: 9 RQLLESGVQFG------HRNFLWNPKMERYIFCER-NNTHIIDLSQTVPMLQKALQVISD 61
+ LL + G H+ E Y+F R + H+I++ +T L A ++I+
Sbjct: 7 QLLLAANTHLGARNVQVHQ--------EPYVFNARPDGVHVINVGKTWEKLVLAARIIAA 58
Query: 62 TVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEE 121
+ ++ +++++ V++ A + + ++ G TN+ T S
Sbjct: 59 -IPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRS----------- 106
Query: 122 LLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181
P L+ V D + AI+EA +
Sbjct: 107 ----------------------------------FKEPRLVIVTDPRSDAQAIKEASYVN 132
Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIAR 228
IP++A+ D +S + VD IP N+ SI L L+A +
Sbjct: 133 IPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGA 179