RPSBLAST alignment of GI: 254780779 and protein with PDBid: 2zkq

>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Length = 295

 Score =  189 bits (480), Expect = 8e-49
 Identities = 51/280 (18%), Positives = 105/280 (37%), Gaps = 55/280 (19%)

Query: 1   MALPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVI 59
           + + +  + + L +G   G  N   + +ME+YI+  +++  +II+L +T   L  A + I
Sbjct: 8   LQMKEEDVLKFLAAGTHLGGTN--LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAI 65

Query: 60  SDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDL 119
              +     +  +++++     V++ A  +    +  ++  G  TN              
Sbjct: 66  -VAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ------------- 111

Query: 120 EELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARR 179
                                           I+     P L+ V D   +   + EA  
Sbjct: 112 --------------------------------IQAAFREPRLLVVTDPRADHQPLTEASY 139

Query: 180 LRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG---IARQHSY-MGA 235
           + +P +A+ +T+S    VD  IP N+  + S+ L   ++A   +     I+R+H + +  
Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199

Query: 236 DTKSAGETVVHSKEGMQLEEDSQSSESSVLDGQEVAVVPE 275
           D     +     KE     E + + E     G+  A  PE
Sbjct: 200 DLYFYRDPEEIEKEEQAAAEKAVTKEEF--QGEWTAPAPE 237