RPSBLAST alignment of GI: 254780779 and protein with PDBid: 3i1m
>3i1m_B 30S ribosomal protein S2; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_B* 3e1a_B 3e1c_B 1vs5_B 3i1o_B 3i1q_B 3i1s_B 3i1z_B 3i21_B 2qal_B* 1p87_B 2aw7_B 2avy_B 2i2u_B 2i2p_B* 2qan_B* 2qb9_B* 2qbb_B* 2qbd_B 2qbf_B ... Length = 241
Score = 235 bits (601), Expect = 6e-63
Identities = 111/237 (46%), Positives = 160/237 (67%), Gaps = 1/237 (0%)
Query: 3 LPQFTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDT 62
+ ++R +L++GV FGH+ WNPKM+ +IF RN HII+L +TVPM +AL ++
Sbjct: 1 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI 60
Query: 63 VARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEEL 122
+R G+ILFV TK AS+ V +AA Q+ VN +WLGGM+TNWKTV QSI++L+DLE
Sbjct: 61 ASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ 120
Query: 123 LNK-ENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLR 181
TKKE L R+ +KL+ +L GI+DMGGLPD +FV+D + E +AI+EA L
Sbjct: 121 SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180
Query: 182 IPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADTK 238
IP+ A+VDTNS+PD VD+VIPGNDD+ R++ L+ VA+ +G ++ + ++
Sbjct: 181 IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESF 237