RPSBLAST alignment of GI: 254780779 and protein with PDBid: 3jyv
>3jyv_B 40S ribosomal protein S0(A); eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_B Length = 193
Score = 165 bits (418), Expect = 1e-41
Identities = 45/219 (20%), Positives = 82/219 (37%), Gaps = 49/219 (22%)
Query: 8 IRQLLESGVQFGHRNFLWNPKMERYIFCERNN-THIIDLSQTVPMLQKALQVISDTVARG 66
+ LL + G RN E Y+F R + H+I++ +T L A ++I +
Sbjct: 6 AQLLLAANTHLGARN--VQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARII-AAIPNP 62
Query: 67 GRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKE 126
++ +++++ V++ A + + ++ G TN+ T S
Sbjct: 63 EDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKE------------- 109
Query: 127 NQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVA 186
P L+ V D + AI+EA + IP++A
Sbjct: 110 --------------------------------PRLVIVTDPRSDAQAIKEASYVNIPVIA 137
Query: 187 VVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDG 225
+ D +S + VD IP N+ SI L L+A +
Sbjct: 138 LTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRL 176