HHsearch alignment for GI: 254780780 and conserved domain: COG4360
>COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism].
Probab=96.69 E-value=0.0023 Score=42.12 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=52.1
Q ss_pred CEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEE
Q ss_conf 90999941788898229999415542134402788898999999730445531352666999825756686310106999
Q gi|254780780|r 32 DILLAIMDIMPRNPGHVLIIPKSRIRDIFEAPPEILSQIAFLIKKIAIACKSAFQADGIQILQFNGHAAGQTVPHLHFHV 111 (155)
Q Consensus 32 d~~~afld~~P~~~GH~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~al~~~~~~~~~ni~~~~g~~~gq~V~HlH~Hi 111 (155)
T Consensus 92 ~th~~llNKF~VVdeHlLiVTrefedQ~s~LTl~Df~ta~~vL----------~~ldg-lvFYNsGp~aGaSq~HkHLQi 160 (298)
T COG4360 92 DTHKLLLNKFPVVDEHLLIVTREFEDQESALTLADFTTAYAVL----------CGLDG-LVFYNSGPIAGASQDHKHLQI 160 (298)
T ss_pred HHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHH----------HCCCC-EEEECCCCCCCCCCCCCCEEE
T ss_conf 6576565168766643578640322012657888999999998----------61466-378657877676777662067
Q ss_pred EECCC
Q ss_conf 95237
Q gi|254780780|r 112 IPCKN 116 (155)
Q Consensus 112 iPR~~ 116 (155)
T Consensus 161 ~pmPf 165 (298)
T COG4360 161 VPMPF 165 (298)
T ss_pred EECCC
T ss_conf 60366