HHsearch alignment for GI: 254780780 and conserved domain: cd00608
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.
Probab=97.73 E-value=0.0002 Score=48.74 Aligned_cols=107 Identities=13% Similarity=0.113 Sum_probs=71.3
Q ss_pred CCCCCCCCHHHHHHCCCCCCCEEEECCEEEEEECCCCCC--------------------CCE--EEEEECCCCCHHHHHH
Q ss_conf 566589765454446888731787789099994178889--------------------822--9999415542134402
Q gi|254780780|r 6 STHYDNQNIFIKIIRNETNACRVYEDDILLAIMDIMPRN--------------------PGH--VLIIPKSRIRDIFEAP 63 (155)
Q Consensus 6 ~~~~dd~CiFC~Ii~ge~p~~~v~E~d~~~afld~~P~~--------------------~GH--~lViPk~H~~~l~dL~ 63 (155)
T Consensus 33 ~~~~~~~CPfCpG~e~-~~~~~~~~~w~vrV~~N~fPal~~~~~~~~~~~~~l~~~~~a~G~hEVIi~sp~H~~~l~~l~ 111 (329)
T cd00608 33 LPEYDPDCPLCPGNER-ADTGEQNPDYDVRVFENDFPALKPDAPAPEDSDDGLFRTAPARGRCEVICFSPDHNLTLAEMS 111 (329)
T ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCCCHHHCC
T ss_conf 8777899997999877-788988999738998379965457888877677730004566603799997864236834589
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEEE
Q ss_conf 78889899999973044553135266699982575668631010699995
Q gi|254780780|r 64 PEILSQIAFLIKKIAIACKSAFQADGIQILQFNGHAAGQTVPHLHFHVIP 113 (155)
Q Consensus 64 ~~~~~~l~~~~~~v~~al~~~~~~~~~ni~~~~g~~~gq~V~HlH~HiiP 113 (155)
T Consensus 112 ~~~i~~vl~~~~~R~~~L~~~~~i~yv~iFkN~G~~aGaSl~HpH~QI~A 161 (329)
T cd00608 112 VAEIREVVEAWAERTRELGKNPRIKYVQIFENKGAEMGASLPHPHGQIWA 161 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHEEE
T ss_conf 99999999999999999862888518999830573456356687433143