HHsearch alignment of GI: 254780780 and MMDB domain: 2oik_A_
>2oik_A (A:) Histidine triad (HIT) protein; YP_546612.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus KT}
Probab=100.00 E-value=1.2e-32 Score=224.35 Aligned_cols=142 Identities=15% Similarity=0.257 Sum_probs=128.9
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66566589765454446888731787789099994178889822999941554213440278889899999973044553
Q gi|254780780|r 4 KSSTHYDNQNIFIKIIRNETNACRVYEDDILLAIMDIMPRNPGHVLIIPKSRIRDIFEAPPEILSQIAFLIKKIAIACKS 83 (155)
Q Consensus 4 ~s~~~~dd~CiFC~Ii~ge~p~~~v~E~d~~~afld~~P~~~GH~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~al~~ 83 (155)
.|++.++++|+||+|++|++ ||||+.++||+|++|.+|||+||+||+|+.++.||+++++..++.+++++++++++
T Consensus 3 ~~~~~~~~~C~fC~i~~~~i----i~e~~~~~a~~~~~p~~~gh~lvipkrHv~~~~dL~~~e~~~l~~~~~~v~~~l~~ 78 (154)
T 2oik_A 3 TRTXSFHKNCELCTTAGGEI----LWQDALCRVVHVENQDYPGFCRVILNRHVKEXSDLRPAERDHLXLVVFAVEEAVRE 78 (154)
T ss_dssp ----CCCTTCHHHHSCCSEE----EEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEE----EEECCCEEEEECCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 77489995291757789808----99789599998279999867997351112303222488999989999999899987
Q ss_pred HCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 13526669998257566863101069999523799765345--577666889899999999999999998840
Q gi|254780780|r 84 AFQADGIQILQFNGHAAGQTVPHLHFHVIPCKNGDNASHTN--IHPTQKIENFAKLEINAQKIRKELQNFLKT 154 (155)
Q Consensus 84 ~~~~~~~ni~~~~g~~~gq~V~HlH~HiiPR~~~d~~~~~~--~~~~~~~~~~~~l~~~a~~lr~~l~~~l~~ 154 (155)
+++++++|+.++ ||.++|+|+|||||+.+|...... .+......+..++++.+++||++|+..+++
T Consensus 79 ~~~~~~~~~~~~-----g~~~~HlH~HiiPr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~ 146 (154)
T 2oik_A 79 VXRPDKINLASL-----GNXTPHVHWHVIPRFKRDRHFPNSVWGETKRESLPQALDQGSTTALKKAISVRLDQ 146 (154)
T ss_dssp HHCCSEEEEEEC-----CSSSCSCEEEEEEECTTSSSTTSCTTSCCCSCCCCCCCCHHHHHHHHHHHHHHHC-
T ss_pred HCCCCCHHHHHH-----CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 604421299986-----79888779999615678877885500678776685677499999999999988666