HHsearch results for GI: 254780780 and protein with PDBid: 1ems_A
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.98 E-value=2e-32 Score=222.14 Aligned_cols=128 Identities=23% Similarity=0.372 Sum_probs=111.3
Q ss_pred CCCCC-CEEEECCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 88873-17877890999941788898229999415542134402788898999999730445531352666999825756
Q gi|254780780|r 21 NETNA-CRVYEDDILLAIMDIMPRNPGHVLIIPKSRIRDIFEAPPEILSQIAFLIKKIAIACKSAFQADGIQILQFNGHA 99 (155)
Q Consensus 21 ge~p~-~~v~E~d~~~afld~~P~~~GH~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~al~~~~~~~~~ni~~~~g~~ 99 (155)
.++|+ ++||||++++||+|++|.+|||+|||||+|++++.||+++++.+++.+++++++++++.++++|+|+++|+|+.
T Consensus 304 ~~ip~~~~~~e~~~~~a~~d~~p~~~gh~lvipk~h~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 383 (440)
T 1ems_A 304 FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKD 383 (440)
T ss_dssp EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCSGG
T ss_pred CCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 22577639997896799978999999963027850019914699999999999999999999874599859999957836
Q ss_pred CCCEEEEEEEEEEECCCCCCCCCCCCC--------CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 686310106999952379976534557--------7666889899999999999999
Q gi|254780780|r 100 AGQTVPHLHFHVIPCKNGDNASHTNIH--------PTQKIENFAKLEINAQKIRKEL 148 (155)
Q Consensus 100 ~gq~V~HlH~HiiPR~~~d~~~~~~~~--------~~~~~~~~~~l~~~a~~lr~~l 148 (155)
+||+|||+|+|||||+.+|......+. +.......++|++.|++||+.|
T Consensus 384 agq~v~H~H~HiiPr~~~D~~~~~~~~~~~~~~~~~~~~~~~~eel~~~a~~lr~~l 440 (440)
T 1ems_A 384 AGQTVPHVHIHILPRRAGDFGDNEIYQKLASHDKEPERKPRSNEQMAEEAVVYRNLM 440 (440)
T ss_dssp GTCCSSSCCEEEEEECSSCC-------------------CCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 588757689999336789877422444301023430027887999999999999519