HHsearch results for GI: 254780780 and protein with PDBid: 3bl9_A
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=98.77 E-value=9.6e-08 Score=68.13 Aligned_cols=98 Identities=17% Similarity=0.221 Sum_probs=71.7
Q ss_pred HHHCCCC-CCCEEEECCE----EEEEECCC----CCCCCEEE-EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf 4446888-7317877890----99994178----88982299-99415542134402788898999999730445531--
Q gi|254780780|r 17 KIIRNET-NACRVYEDDI----LLAIMDIM----PRNPGHVL-IIPKSRIRDIFEAPPEILSQIAFLIKKIAIACKSA-- 84 (155)
Q Consensus 17 ~Ii~ge~-p~~~v~E~d~----~~afld~~----P~~~GH~l-ViPk~H~~~l~dL~~~~~~~l~~~~~~v~~al~~~-- 84 (155)
.|+.+.. .-++||||.. |+.+.|.+ +...=|+| |+||+|+.++.||..+...-|-.+.....+++.+.
T Consensus 142 nIL~~~~E~e~viy~d~d~~~GFvllpD~kWd~~~~~~LhlL~Iv~r~~I~SlrdL~~~HlpLL~~m~~~~~~vi~~~yg 221 (301)
T 3bl9_A 142 NILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYR 221 (301)
T ss_dssp HHHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCCEEEEECCCCCCCEEECCCCCCCCCCHHHEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97507765432698469988887982556758876423689998632678992888897999999999999999998709
Q ss_pred CCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCC
Q ss_conf 3526669998257566863101069999523799
Q gi|254780780|r 85 FQADGIQILQFNGHAAGQTVPHLHFHVIPCKNGD 118 (155)
Q Consensus 85 ~~~~~~ni~~~~g~~~gq~V~HlH~HiiPR~~~d 118 (155)
+..+++.++++-+ ++++|||+|++......
T Consensus 222 l~~~~lRl~~Hy~----PS~yHLHvHvi~~~~~~ 251 (301)
T 3bl9_A 222 MKGDHLRVYLHYL----PSYYHLHVHFTALGFEA 251 (301)
T ss_dssp CCGGGEEEEEESS----CSSSSCEEEEEETTSCC
T ss_pred CCHHHEEEEEECC----CCCCEEEEEEEECCCCC
T ss_conf 9834579999189----98431899998436788