HHsearch alignment for GI: 254780781 and conserved domain: COG1043

Probab=98.31  E-value=2.9e-06  Score=58.97  Aligned_cols=110  Identities=20%  Similarity=0.290  Sum_probs=77.3

Q ss_pred             CCCCCCCEECCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCC
Q ss_conf             51025431035640066514620103023533677201566123220473068688123211210057765644872584
Q gi|254780781|r  109 FRIIPGTIVRHSAYIGPKAVLMPSFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNC  188 (285)
Q Consensus       109 ~rv~P~a~vr~ga~Ig~g~vimp~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v  188 (285)
T Consensus        82 l~IG~~n~IRE~vTi~~GT~~g~g~----T~IGdnnl~May~HVAHDC~iGn~~ilaNnatLAG--------HV~igD~a  149 (260)
T COG1043          82 LIIGDNNTIREFVTIHRGTVQGGGV----TRIGDNNLIMAYAHVAHDCVIGNNCILANNATLAG--------HVEVGDYA  149 (260)
T ss_pred             EEECCCCEEEEEEEEECCCCCCCEE----EEECCCCEEEEEEEEECCCEECCCEEEECCCEEEC--------EEEECCEE
T ss_conf             9988997586688986154478615----99778878987310313444567179966866854--------07887789


Q ss_pred             EEECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEECCCCCC
Q ss_conf             7821857846888458856630046527833687158814644549987896056445
Q gi|254780781|r  189 FIGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVVVPGSYPS  246 (285)
Q Consensus       189 ~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vvvpg~~~~  246 (285)
T Consensus       150 iiGG~saVHQF~rIG~~amiGg~S~v~~---------------DVpPy~~~~-Gn~a~  191 (260)
T COG1043         150 IIGGLSAVHQFVRIGAHAMIGGLSAVSQ---------------DVPPYVIAS-GNHAR  191 (260)
T ss_pred             EECCCCEEEEEEEECCHHEECCCHHHCC---------------CCCCEEEEC-CCCCC
T ss_conf             9747523777889740112344101036---------------779838852-87044