HHsearch alignment for GI: 254780781 and conserved domain: COG2171
>COG2171 DapD Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism].
Probab=99.05 E-value=3.9e-09 Score=76.51 Aligned_cols=178 Identities=21% Similarity=0.288 Sum_probs=107.0
Q ss_pred HCCCEEE--EEECCCCCEEEEHHHHHHHHHEEECCCCEEEECCCCCCCHHHCC----------------CCCCCC-CCHH
Q ss_conf 0793799--88759996886078862322206426744762477642011017----------------753236-5202
Q gi|254780781|r 42 DRGIIRI--ASRDDNGHWNTHQWIKKAILLSFQINPTKIISDGNGYSTWWDKI----------------PAKFDD-WKTK 102 (285)
Q Consensus 42 D~G~iRV--AEk~~nG~W~VNeWvKKAILL~Fri~~~~~i~~g~~~~~~~DKv----------------p~Kf~~-~~~~ 102 (285)
T Consensus 14 ~~~~v~~~~~~~~-~~~~~~~~~~~~L~~~s~r~~~~~~~-~~~~~~~~l~~~v~~~~~~~~~~~l~~~~~~~~~~~~~v 91 (271)
T COG2171 14 ERKAVRTVIYVLD-DLPEAVADAYLRLHLLSHRVAEPHID-NLWGTFEWLKKAVLLGFGPCDLELLEAGRLRIRGYYDKV 91 (271)
T ss_pred CCCCEEEEEECCC-CCCHHHHHHHHHHHHCCEEEECCCCC-CCHHHHHHHCEEEEECCCCCCHHHHHHCCCCCCCCEEEC
T ss_conf 6553036775077-74122688998753045353155534-411244232116995467750577752433435641321
Q ss_pred HHHHCCCCCCCCCEECCCCCCCC-CCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCC
Q ss_conf 34424751025431035640066-514620-1030235336772015661232204730686881232112100577656
Q gi|254780781|r 103 DFEKHNFRIIPGTIVRHSAYIGP-KAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTG 180 (285)
Q Consensus 103 ~f~~~g~rv~P~a~vr~ga~Ig~-g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~ 180 (285)
T Consensus 92 ~~~~~~~~--------~~d~~~~~g~RI~p~a~VR~ga~i~~gtvvM~~sfVNigA~~~~gtMVd~~as~G~-------- 155 (271)
T COG2171 92 DSVDKAPR--------MLDYFVPEGVRIVPGAIVRLGAYIAKGTVVMPESFVNIGAGTGEGTMVDGRASVGS-------- 155 (271)
T ss_pred CCCCCCCC--------HHHHCCCCCEEECCCCEEEECCEECCCCEECCCCEEEECCCCCCCEEEEEEEEEEC--------
T ss_conf 11145531--------34550557636367647760528779938755566877760275258961565513--------
Q ss_pred CEEECCCCEEECCCEEEC--------CEEECCCCEEEEEEEECCCCEEEE---CCCCCEEEEECCCCC
Q ss_conf 448725847821857846--------888458856630046527833687---158814644549987
Q gi|254780781|r 181 PTIIEDNCFIGARSEIVE--------GCIIREGSVLGMGVFIGKSTKIID---RNTGEITYGEVPSYS 237 (285)
Q Consensus 181 pviIeD~v~IGa~s~I~~--------Gv~Ig~gavIgaG~vit~st~i~d---~~~~~~~~g~vP~~~ 237 (285)
T Consensus 156 ~a~VGkn~higgGa~I~GVLep~~a~Pv~IgdncliGAns~~veGV~vGdg~VV~aGv~I~~~tki~~ 223 (271)
T COG2171 156 CAQVGKNSHIGGGASIGGVLEPLQANPVIIGDNCLIGANSEVVEGVIVGDGCVVAAGVFITQDTKIYD 223 (271)
T ss_pred CEEECCCCCCCCCCEEEEEECCCCCCCEEECCCCEECCCCCEEEEEEECCCCEEECCEEEECCCCEEE
T ss_conf 17979984527863676773488878869877618624533486169678968854508937951477