HHsearch alignment for GI: 254780781 and conserved domain: TIGR01172
>TIGR01172 cysE serine O-acetyltransferase; InterPro: IPR005881 The biosynthesis of L-cysteine is the predominant way by which inorganic sulphur is incorporated into organic compounds. In this process, the most abundant utilizable source of sulphur, inorganic sulphate, is taken up and reduced to sulphide. Sulphide is used to produce L-cysteine, which serves for protein synthesis or the production of other sulphur-containing organic compounds. Two routes for cysteine biosynthesis in nature have been documented. Serine transacetylase (2.3.1.30 from EC) catalyzes steps in pathway I, the activation of L-serine by acetyl-coenzyme A, yielding O-acetyl-L-serine.; GO: 0009001 serine O-acetyltransferase activity, 0006535 cysteine biosynthetic process from serine, 0005737 cytoplasm.
Probab=98.60 E-value=4.9e-08 Score=69.79 Aligned_cols=102 Identities=22% Similarity=0.273 Sum_probs=75.3
Q ss_pred CCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCCCCCCCEEE---CCEEECCCCCCCCCCCCCCCEECCE------
Q ss_conf 4201101775323652023442475102543103564006651462---0103023533677201566123220------
Q gi|254780781|r 85 YSTWWDKIPAKFDDWKTKDFEKHNFRIIPGTIVRHSAYIGPKAVLM---PSFVNMGAYIGEGSMIDTWSTVGSC------ 155 (285)
Q Consensus 85 ~~~~~DKvp~Kf~~~~~~~f~~~g~rv~P~a~vr~ga~Ig~g~vim---p~~VniGA~Ig~gt~I~~~a~IG~~------ 155 (285)
T Consensus 38 H~Ly~~~~k~l------Ar~~~~~~r~~tgidIHPgA~IG~g~fIDHg~GvVIGETa~iGddv~iyhGVTLGGtgk~~G~ 111 (163)
T TIGR01172 38 HALYKRGFKFL------ARLISNFIRVLTGIDIHPGARIGRGVFIDHGTGVVIGETAEIGDDVTIYHGVTLGGTGKEKGV 111 (163)
T ss_pred HHHHHCCHHHH------HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEEEECEEECCCCCCCCC
T ss_conf 56762463179------999987665530232176430077307775603685003687388378632120678888788
Q ss_pred ---EEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEECCE
Q ss_conf ---473068688123211210057765644872584782185784688
Q gi|254780781|r 156 ---AQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVEGC 200 (285)
Q Consensus 156 ---a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~Gv 200 (285)
T Consensus 112 kRHPt~~~gV~iGAGAKvLG--------~I~vG~~AkiGAnsVVl~dV 151 (163)
T TIGR01172 112 KRHPTIGEGVVIGAGAKVLG--------NIEVGENAKIGANSVVLKDV 151 (163)
T ss_pred CCCCCCCCCEEEEECCEEEC--------CEEECCCCEECCCEEECCCC
T ss_conf 98882568717840782403--------76677997772332673537