HHsearch alignment for GI: 254780781 and conserved domain: TIGR01853

>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro: IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (2.3.1 from EC) catalyses an early step in lipid A biosynthesis : UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + (R)-3-hydroxytetradecanoyl- [acyl carrier protein] = UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine + [acyl carrier protein] Members of this family also contain a hexapeptide repeat (IPR001451 from INTERPRO). This entry represents the non-repeating region of LPXD proteins.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0009245 lipid A biosynthetic process.
Probab=99.86  E-value=4.9e-22  Score=155.51  Aligned_cols=173  Identities=29%  Similarity=0.346  Sum_probs=128.0

Q ss_pred             HHCCCCCCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECC-----------
Q ss_conf             424751025431035640066514620-10302353367720156612322047306868812321121-----------
Q gi|254780781|r  105 EKHNFRIIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGG-----------  172 (285)
Q Consensus       105 ~~~g~rv~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGG-----------  172 (285)
T Consensus       116 ~~~~v~I~pnvvIG~~v~IG~~~~I~pg~~iG~~v~IG~~~~i~~~v~i~~~~~lG~nV~I~~GaVIG~DGFGya~~~~g  195 (336)
T TIGR01853       116 IGEGVTIGPNVVIGAGVEIGENVIIGPGVVIGDDVVIGDGSVIYPNVVIYERVQLGKNVIIHAGAVIGSDGFGYAHTANG  195 (336)
T ss_pred             CCCCCEECCEEEECCCCEECCCCEECCCCEECCCCEECCCCEEECCCEEEECCEECCEEEECCCCEECCCCCCEEECCCC
T ss_conf             07843687541788886877863635776876886879967780670897241564715876887886787320357889


Q ss_pred             -EECCCCCCCEEECCCCEEECCCEEECC----------------------EEECCCCEEEEEEEECCCCEEEE--CCCCC
Q ss_conf             -005776564487258478218578468----------------------88458856630046527833687--15881
Q gi|254780781|r  173 -VLEPIQTGPTIIEDNCFIGARSEIVEG----------------------CIIREGSVLGMGVFIGKSTKIID--RNTGE  227 (285)
Q Consensus       173 -vlep~~a~pviIeD~v~IGa~s~I~~G----------------------v~Ig~gavIgaG~vit~st~i~d--~~~~~  227 (285)
T Consensus       196 ~~~KI~q~G~ViI~D~VEIGANTtIDRg~~~dT~i~~gtKIDNLVQIAHNc~IG~n~~ivaqvGiaGSt~iG~~V~~GGq  275 (336)
T TIGR01853       196 GHVKIPQIGRVIIEDDVEIGANTTIDRGAFDDTVIGEGTKIDNLVQIAHNCRIGENCIIVAQVGIAGSTKIGRNVILGGQ  275 (336)
T ss_pred             CEEEEEEECEEEEECEEEECCCCHHHCCCCCCCEEECCCEECCEEEEEEEEEECCCCEEEEEEECCEEEEECCEEEECCE
T ss_conf             71544130248960233874687021102147187238466231574133462664278964201134675580696260


Q ss_pred             ------EEEEE---CCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHC
Q ss_conf             ------46445---499878960564455677665776446727989612024668889987511
Q gi|254780781|r  228 ------ITYGE---VPSYSVVVPGSYPSINLKGDIAGPHLYCAVIIKKVDEKTRSKTSINTLLRD  283 (285)
Q Consensus       228 ------~~~g~---vP~~~vvvpg~~~~~~~~~~~~~~~~~cavi~~~~d~~t~~k~~ln~~lR~  283 (285)
T Consensus       276 vGv~GHl~IgD~v~i~A~sgV-~~~~~~~~---~yggg-i-~Pa~~~~~w~k~~a~~~~l~~~~~  334 (336)
T TIGR01853       276 VGVAGHLEIGDNVTIGAKSGV-TKSVPPNG---RYGGG-I-IPAMPQKEWLKIAAKLKRLPELRK  334 (336)
T ss_pred             EEEECEEEECCCCEEEEECCC-CCCCCCCC---CCCEE-E-CCCCHHHHHHHHHHHHHHCHHHHC
T ss_conf             265110894383488451220-67779886---01001-1-141202478999999871425531