HHsearch alignment for GI: 254780781 and conserved domain: TIGR03535
>TIGR03535 DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. Alternate name: tetrahydrodipicolinate N-succinyltransferase.
Probab=99.78 E-value=5e-19 Score=137.08 Aligned_cols=176 Identities=24% Similarity=0.331 Sum_probs=131.6
Q ss_pred CHHHCCCCCCCCCCHHHH-HHCCCCCCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEE
Q ss_conf 011017753236520234-424751025431035640066514620-103023533677201566123220473068688
Q gi|254780781|r 87 TWWDKIPAKFDDWKTKDF-EKHNFRIIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHI 164 (285)
Q Consensus 87 ~~~DKvp~Kf~~~~~~~f-~~~g~rv~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI 164 (285)
T Consensus 137 ~~vDKfPrm------~dyvvP~gVRIada~rVRLGAyl~~GTtVmheGfvnfNaGTlG~~mvEG--RiS~gvvvg~gsDi 208 (319)
T TIGR03535 137 YSVDKFPRM------VDYVVPTGVRIGDADRVRLGAHLAEGTTVMHEGFVNFNAGTLGASMVEG--RISAGVVVGDGSDI 208 (319)
T ss_pred EEECCCCCH------HCEECCCCCEECCCCCEEEEEEECCCCEEEECCEEEECCCCCCCCEEEE--EEECCEEECCCCCC
T ss_conf 972447513------3045678847704552554007659807710013760476766534631--44034696678766
Q ss_pred ECCCEECCEECCCCCCCEEECCCCEEECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEE----E
Q ss_conf 123211210057765644872584782185784688845885663004652783368715881464454998789----6
Q gi|254780781|r 165 SGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVV----V 240 (285)
Q Consensus 165 ~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vv----v 240 (285)
T Consensus 209 GGgaS~mGtLSGGg~~~isiG~~cLlGANsGi--GI~LGD~C~VeaGlyitaGTkV~~~~~~~-~~~--~~~~~vkA~eL 283 (319)
T TIGR03535 209 GGGASIMGTLSGGGKEVISIGERCLLGANSGI--GISLGDDCVVEAGLYVTAGTKVTVDGPKD-AAG--PDGEVVKASEL 283 (319)
T ss_pred CCCCEEEEEECCCCCEEEEECCCCEECCCCCC--CCCCCCCCEEECCEEECCCCEEEEECCCC-CCC--CCCCEEEHHHH
T ss_conf 77501145304898224788653200454555--74358971781122881797798505222-457--76638875874
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHC
Q ss_conf 0564455677665776446727989612024668889987511
Q gi|254780781|r 241 PGSYPSINLKGDIAGPHLYCAVIIKKVDEKTRSKTSINTLLRD 283 (285)
Q Consensus 241 pg~~~~~~~~~~~~~~~~~cavi~~~~d~~t~~k~~ln~~lR~ 283 (285)
T Consensus 284 sG~~~llfrrn-----S~tG~ve~~~~~~---~~i~LN~~LH~ 318 (319)
T TIGR03535 284 SGASNILFRRN-----SVTGAVEAVPRKG---VGIELNEALHA 318 (319)
T ss_pred CCCCCCEEEEC-----CCCCCEEEEECCC---CEEECHHHHHC
T ss_conf 79988179970-----7876589996589---74850066517