HHsearch alignment for GI: 254780781 and conserved domain: TIGR03535
>TIGR03535 DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. Alternate name: tetrahydrodipicolinate N-succinyltransferase.
Probab=97.33 E-value=0.00035 Score=46.19 Aligned_cols=151 Identities=21% Similarity=0.244 Sum_probs=77.4
Q ss_pred EEHHHHHHHHHEEECCCCEEEEC-C----CCCCCHHHCCCCCCCCCCHHHHH--HCCCCCCCCCE---ECCCCCCCC-CC
Q ss_conf 60788623222064267447624-7----76420110177532365202344--24751025431---035640066-51
Q gi|254780781|r 59 THQWIKKAILLSFQINPTKIISD-G----NGYSTWWDKIPAKFDDWKTKDFE--KHNFRIIPGTI---VRHSAYIGP-KA 127 (285)
Q Consensus 59 VNeWvKKAILL~Fri~~~~~i~~-g----~~~~~~~DKvp~Kf~~~~~~~f~--~~g~rv~P~a~---vr~ga~Ig~-g~ 127 (285)
T Consensus 77 ~daYLkL-hLLShrlvkP~~lnLdgiF~~L~nvaWTn~Gp~~~~~~~~~~~~~~~~g~-~~v~~vDKfPrm~dyvvP~gV 154 (319)
T TIGR03535 77 YDAYLRL-HLLSHRLVKPHTINLDGIFGLLPNVVWTNHGPCAVDGFELTRARLRARGP-VTVYSVDKFPRMVDYVVPTGV 154 (319)
T ss_pred HHHHHHH-HHHHHCCCCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCC-EEEEEECCCCCHHCEECCCCC
T ss_conf 8989999-98760564677015666776540543236777178899999999986798-799972447513304567884
Q ss_pred EEE-CCEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEEC--------
Q ss_conf 462-01030235336772015661232204730686881232112100577656448725847821857846--------
Q gi|254780781|r 128 VLM-PSFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVE-------- 198 (285)
Q Consensus 128 vim-p~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~-------- 198 (285)
T Consensus 155 RIada~rVRLGAyl~~GTtVmheGfvnfNa----------GTlG~~mvEGRiS~gvvvg~gsDiGGgaS~mGtLSGGg~~ 224 (319)
T TIGR03535 155 RIGDADRVRLGAHLAEGTTVMHEGFVNFNA----------GTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGKE 224 (319)
T ss_pred EECCCCCEEEEEEECCCCEEEECCEEEECC----------CCCCCCEEEEEEECCEEECCCCCCCCCCEEEEEECCCCCE
T ss_conf 770455255400765980771001376047----------6766534631440346966787667750114530489822
Q ss_pred CEEECCCCEEEEEEEECCCCEEEEC
Q ss_conf 8884588566300465278336871
Q gi|254780781|r 199 GCIIREGSVLGMGVFIGKSTKIIDR 223 (285)
Q Consensus 199 Gv~Ig~gavIgaG~vit~st~i~d~ 223 (285)
T Consensus 225 ~isiG~~cLlGANsGiG--I~LGD~ 247 (319)
T TIGR03535 225 VISIGERCLLGANSGIG--ISLGDD 247 (319)
T ss_pred EEEECCCCEECCCCCCC--CCCCCC
T ss_conf 47886532004545557--435897