HHsearch alignment for GI: 254780781 and conserved domain: cd00208
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.
Probab=99.65 E-value=3.1e-16 Score=120.01 Aligned_cols=78 Identities=37% Similarity=0.572 Sum_probs=74.5
Q ss_pred CCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEECCEEECCCCEEEEEEEEC
Q ss_conf 533677201566123220473068688123211210057765644872584782185784688845885663004652
Q gi|254780781|r 138 AYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVEGCIIREGSVLGMGVFIG 215 (285)
Q Consensus 138 A~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit 215 (285)
T Consensus 1 V~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~~~~~~Ig~~v~Ig~~a~I~~gv~IGdn~~IgagavVt 78 (78)
T cd00208 1 VFIGEGVKIHPKAVIRGPVVIGDNVNIGPGAVIGAATGPNEKNPTIIGDNVEIGANAVIHGGVKIGDNAVIGAGAVVT 78 (78)
T ss_pred CEECCCCEECCCCEECCCEEECCCCEECCCCEEEECCCCCCCCCCEECCCEEECCCCEEECCEEECCCCEECCCCEEC
T ss_conf 999998499998499882699999989999899637988667898999996998689897981999999999885699