HHsearch alignment for GI: 254780781 and conserved domain: cd03353
>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.
Probab=99.71 E-value=5.2e-17 Score=124.76 Aligned_cols=118 Identities=29% Similarity=0.466 Sum_probs=92.2
Q ss_pred HCCCCCCCCCEECCCCCCCCCCEEECCEEEC-CCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEE
Q ss_conf 2475102543103564006651462010302-353367720156612322047306868812321121005776564487
Q gi|254780781|r 106 KHNFRIIPGTIVRHSAYIGPKAVLMPSFVNM-GAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTII 184 (285)
Q Consensus 106 ~~g~rv~P~a~vr~ga~Ig~g~vimp~~Vni-GA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviI 184 (285)
T Consensus 71 g~~~~IG~~~~i~~~~~I~~~~~i-G~~v~i~~~~ig~~~~i~h~~~ig-d~~Ig~~v~Ig~~~i~~n-~~g~~~~~t~I 147 (193)
T cd03353 71 GNGATVGPFAHLRPGTVLGEGVHI-GNFVEIKKSTIGEGSKANHLSYLG-DAEIGEGVNIGAGTITCN-YDGVNKHRTVI 147 (193)
T ss_pred CCCCEECCCEEECCCCEECCEEEE-CCCEEEECCCCCCCCEECCEEECC-CCEECCCCEECCCEEEEC-CCCCCCCCCEE
T ss_conf 765266685076587688751674-253576444336884877244618-856777888866758873-43433562343
Q ss_pred CCCCEEECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEEC
Q ss_conf 258478218578468884588566300465278336871588146445499878960
Q gi|254780781|r 185 EDNCFIGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVVVP 241 (285)
Q Consensus 185 eD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vvvp 241 (285)
T Consensus 148 Gd~v~IG~~~~i~~~v~IG~~a~Igags~V~k---------------dVpp~~lvvg 189 (193)
T cd03353 148 GDNVFIGSNSQLVAPVTIGDGATIAAGSTITK---------------DVPPGALAIA 189 (193)
T ss_pred CCCCEECCCCEEECCEEECCCCEECCCCEECC---------------CCCCCCEEEE
T ss_conf 35618988987989839999989986988884---------------2399978996