HHsearch alignment for GI: 254780781 and conserved domain: cd03360
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.
Probab=99.88 E-value=8.4e-23 Score=160.19 Aligned_cols=117 Identities=34% Similarity=0.600 Sum_probs=104.6
Q ss_pred HHHHHCCCC----CCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECC
Q ss_conf 234424751----025431035640066514620-103023533677201566123220473068688123211210057
Q gi|254780781|r 102 KDFEKHNFR----IIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEP 176 (285)
Q Consensus 102 ~~f~~~g~r----v~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep 176 (285)
T Consensus 74 ~~l~~~~~~~~niIhp~a~i~~~~~ig~G~~I~~~~~i~~~~~IG~~~~i~~~~~i~Hd~~ig~~~~i~~~~~i~g---- 149 (197)
T cd03360 74 EKLLAAGYRFATLIHPSAVVSPSAVIGEGCVIMAGAVINPDARIGDNVIINTGAVIGHDCVIGDFVHIAPGVVLSG---- 149 (197)
T ss_pred HHHHHCCCEEEEEECCCCEECCCCEECCCCEEECCCEECCCCCCCCEEEECCCHHCCCCCCCCCCCEECCCEEECC----
T ss_conf 9998689967899999959877747999429931759865653043689877001053150131010667236778----
Q ss_pred CCCCCEEECCCCEEECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEE
Q ss_conf 7656448725847821857846888458856630046527833687158814644
Q gi|254780781|r 177 IQTGPTIIEDNCFIGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYG 231 (285)
Q Consensus 177 ~~a~pviIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g 231 (285)
T Consensus 150 ----~v~Ig~~~~iG~~~~i~~~i~Ig~~~~igags~v~~-----~i~~~~~~~G 195 (197)
T cd03360 150 ----GVTIGEGAFIGAGATIIQGVTIGAGAIIGAGAVVTK-----DVPDGSVVVG 195 (197)
T ss_pred ----CEEEEEECCCCCCCEECCCCEECCCCEECCCCEEEE-----ECCCCEEEEE
T ss_conf ----308912162989989879989999999997998912-----5699909993