HHsearch alignment for GI: 254780781 and conserved domain: cd03360
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.
Probab=99.40 E-value=5.1e-13 Score=100.32 Aligned_cols=100 Identities=34% Similarity=0.443 Sum_probs=85.9
Q ss_pred EEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEECCEEECCCCEEEEEE
Q ss_conf 03023533677201566123220473068688123211210057765644872584782185784688845885663004
Q gi|254780781|r 133 FVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVEGCIIREGSVLGMGV 212 (285)
Q Consensus 133 ~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~ 212 (285)
T Consensus 92 ~i~~~~~ig~G~~I~~~~~i~~~~~IG~~~~i~~~~~i~--------Hd~~ig~~~~i~~~~~i~g~v~Ig~~~~iG~~~ 163 (197)
T cd03360 92 VVSPSAVIGEGCVIMAGAVINPDARIGDNVIINTGAVIG--------HDCVIGDFVHIAPGVVLSGGVTIGEGAFIGAGA 163 (197)
T ss_pred EECCCCEECCCCEEECCCEECCCCCCCCEEEECCCHHCC--------CCCCCCCCCEECCCEEECCCEEEEEECCCCCCC
T ss_conf 987774799942993175986565304368987700105--------315013101066723677830891216298998
Q ss_pred EECCCCEEEE---CCCCCEEEEECCCCCEEE
Q ss_conf 6527833687---158814644549987896
Q gi|254780781|r 213 FIGKSTKIID---RNTGEITYGEVPSYSVVV 240 (285)
Q Consensus 213 vit~st~i~d---~~~~~~~~g~vP~~~vvv 240 (285)
T Consensus 164 ~i~~~i~Ig~~~~igags~v~~~i~~~~~~~ 194 (197)
T cd03360 164 TIIQGVTIGAGAIIGAGAVVTKDVPDGSVVV 194 (197)
T ss_pred EECCCCEECCCCEECCCCEEEEECCCCEEEE
T ss_conf 9879989999999997998912569990999