HHsearch alignment for GI: 254780781 and conserved domain: cd05635
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=98.10 E-value=9.6e-06 Score=55.77 Aligned_cols=79 Identities=27% Similarity=0.388 Sum_probs=39.9
Q ss_pred CCCCCCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEECCE
Q ss_conf 0066514620-103023533677201566123220473068688123211210057765644872584782185784688
Q gi|254780781|r 122 YIGPKAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVEGC 200 (285)
Q Consensus 122 ~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~Gv 200 (285)
T Consensus 13 ~I~~~~~I~~~~~i~Gp~~IG~~~~I~p~a~Ir~~t~Ig~~~~IG~--Ei---------k~S~i~~~s~~~H~~YlGD-S 80 (101)
T cd05635 13 YIGKDAVIEPFAVIEGPVYIGPGSRVKMGARIYGNTTIGPTCKIGG--EV---------EDSIIEGYSNKQHDGFLGH-S 80 (101)
T ss_pred EECCCCEECCCCEEECCEEECCCCEECCCCEEECCCEECCCCEECC--EE---------EEEEEECCCCCCCCCEEEE-E
T ss_conf 9879999999999976669999999999978638879999977614--08---------7618857875687758761-1
Q ss_pred EECCCCEEEEEE
Q ss_conf 845885663004
Q gi|254780781|r 201 IIREGSVLGMGV 212 (285)
Q Consensus 201 ~Ig~gavIgaG~ 212 (285)
T Consensus 81 ~iG~~vNiGAGT 92 (101)
T cd05635 81 YLGSWCNLGAGT 92 (101)
T ss_pred EECCCCEECCCC
T ss_conf 783875787785