RPSBLAST alignment for GI: 254780781 and conserved domain: TIGR01853

>gnl|CDD|162561 TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate). Length = 324
 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 42/145 (28%), Positives = 54/145 (37%), Gaps = 35/145 (24%)

Query: 111 IIPGTIVRHSAYIGPKAVLMPSFV-NMGAYIGEGSMIDTWSTVGS-------C------- 155
           I P  +V  SA IG    + P+ V   G  IGE  +I     +G                
Sbjct: 94  IHPTAVVDPSAKIGDGVTIGPNVVIGAGVEIGENVIIGPGVVIGDDVVIGDGSRIHPNVV 153

Query: 156 ----AQIGKNVHISGGVGIGG-----VLEPI-------QTGPTIIEDNCFIGARSEIVEG 199
                Q+GKNV I  G  IG                  Q G  IIED+  IGA + I  G
Sbjct: 154 IYERVQLGKNVIIHSGAVIGSDGFGYAHTANGGHVKIPQIGRVIIEDDVEIGANTTIDRG 213

Query: 200 C----IIREGSVLGMGVFIGKSTKI 220
                II EG+ +   V I  + +I
Sbjct: 214 AFDDTIIGEGTKIDNLVQIAHNCRI 238