HHsearch alignment for GI: 254780782 and conserved domain: PRK08588
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed.
Probab=100.00 E-value=0 Score=532.59 Aligned_cols=368 Identities=26% Similarity=0.366 Sum_probs=322.5
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCH
Q ss_conf 87899999999649997899689999999999977984899970588876248999998799988999733681578887
Q gi|254780782|r 2 TPDCLEHLIQLIKCPSVTPQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARFGTEAPHLMFAGHIDVVPPGDF 81 (389)
Q Consensus 2 ~~e~v~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ill~~H~Dtvp~~~~ 81 (389)
T Consensus 1 ~~e~v~ll~~Lv~i~S~sg~e~~~~~~l~~~l~~~G~~~~~~~~~~----~~~nlva~~g~~~~~l~l~gH~DvVp~g~~ 76 (378)
T PRK08588 1 EEEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVND----GRANLVAEIGSGSPVLALSGHMDVVAAGDQ 76 (378)
T ss_pred CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC----CEEEEEEEECCCCCEEEEECCCCCCCCCCC
T ss_conf 9469999999848999493899999999999998899679997289----907999998999957999786572699974
Q ss_pred HHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC-CCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 7725666422452133236544333201245441000000011-357834999752022011044211111000133212
Q gi|254780782|r 82 NHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPKY-KNFGSISLLITGDEEGPAINGTKKMLSWIEKKGEKW 160 (389)
Q Consensus 82 ~~W~~~Pf~~~~~~g~l~GrG~~D~Kg~ia~~l~a~~~l~~~~-~~~~~i~~~~~~dEE~~~~~G~~~l~~~~~~~~~~~ 160 (389)
T Consensus 77 ~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~l~A~~~l~~~~~~~~~~i~~~~~~dEE~g~~-G~~~l~~~--g~~~~~ 153 (378)
T PRK08588 77 DKWTYDPFKLTEKDGKLYGRGATDMKSGLAALVIALIELKEQGQLLNGTIRLLATAGEEVGQE-GAKQLTEK--GYADDL 153 (378)
T ss_pred CCCCCCCCCEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCH-HHHHHHHH--CCCCCC
T ss_conf 557479975299899999577653546579999999999973799997299999973113766-89999982--753468
Q ss_pred CEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCC---CCCCCCCCCCEEEE
Q ss_conf 035414566543431001232223579999996412310000001201345544320112233---44566442101466
Q gi|254780782|r 161 DACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIG---FDTGNTTFSPTNME 237 (389)
Q Consensus 161 d~~i~~ep~~~~~~~~~i~~g~rG~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~---~~~~~~~~~~~~~~ 237 (389)
T Consensus 154 d~~iv~Ept~~-----~i~~~~kG~~~~~i~v~G~~~Hss~P~~G~NAi~~l~~~i~~l~~~~~~~~~~~~~~~~~~t~~ 228 (378)
T PRK08588 154 DALIIGEPSGY-----GIVYAHKGSMDYKVTSTGKAAHSSMPELGINAIDPLLEFYNEEKEYFDSIKEEDNPYLGGLTHN 228 (378)
T ss_pred CEEEEECCCCC-----EEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
T ss_conf 87999238898-----7999987689999999653221378434637999999999999998764655556455883378
Q ss_pred EEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf 76554204666554321166513434206779999999999876532420343112322266311257867899999999
Q gi|254780782|r 238 ITTIDVGNPSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVFLTHDRKLTSLLSK 317 (389)
Q Consensus 238 i~~i~~g~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~l~~~l~~ 317 (389)
T Consensus 229 ~~~i~g-G~~~NvVP~~a~~~~d~R~~p~~~~~~v~~~i~~~i~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~v~~~~~ 305 (378)
T PRK08588 229 VTVING-GEQVNSVPDEAELEFNIRTIPEYDNDQVIALLQNIINEVNQN--GAQLTLDIYSNHRPVASDKDSDLVQLAKD 305 (378)
T ss_pred EEEEEC-CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 899846-864540487699999996399999999999999999986174--87299999606685246998999999999
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHHH----HCCCEEEEEECCC-CCCCCCCEEEHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999828995797414543588986----0598999900478-73687840479999999999999999872
Q gi|254780782|r 318 SIYNTTGNIPLLSTSGGTSDARFIK----DYCPVIEFGLVGR-TMHALNENASLQDLEDLTCIYENFLQNWF 384 (389)
Q Consensus 318 a~~~~~g~~~~~~~~gg~~d~~~~~----~~iP~v~fGp~~~-~~H~pdE~i~i~~l~~~~~~~~~~i~~~~ 384 (389)
T Consensus 306 ~~~~~~g~~~~~~~~~g~tD~~~~~~~~~~gip~v~~GPG~~~~aH~~dE~v~i~~l~~~~~iy~~~i~~~l 377 (378)
T PRK08588 306 VASSYVERDIPLSAIPGATDASSFLKDNPDNFPVIVFGPGNNLTAHQVDEYVEKDMYLKFIDIYKELIIQYL 377 (378)
T ss_pred HHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
T ss_conf 999984999738888300059999854668961999898999888899820899999999999999999975