HHsearch alignment for GI: 254780782 and conserved domain: PRK08651
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed.
Probab=100.00 E-value=0 Score=486.75 Aligned_cols=350 Identities=26% Similarity=0.390 Sum_probs=298.2
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCC-------CCEEEEEEEEEC-CCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEECC
Q ss_conf 9999999999779848999705888-------762489999987-99988999733681578887772566642245213
Q gi|254780782|r 25 AFFILVNTLKLLGFSIEEKDFQTKN-------TSIVKNLYARFG-TEAPHLMFAGHIDVVPPGDFNHWTYPPFSATIAEG 96 (389)
Q Consensus 25 ~~~~l~~~l~~~G~~~~~~~~~~~~-------~~~~~~~~~~~g-~~~~~ill~~H~Dtvp~~~~~~W~~~Pf~~~~~~g 96 (389)
T Consensus 1 ~~~~l~~~l~~~G~~~e~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~l~l~gH~DvVp~~~--~W~~dPf~~~~~dg 78 (371)
T PRK08651 1 IVELLRDYLESLGFDTEIIEVPDEEVDKLYPYEKDYPNLILLARNGGEPKLHFNGHYDVVPPGE--GWKVTPFEPKVKDG 78 (371)
T ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCC--CCCCCCCCEEEECC
T ss_conf 9789999999779879999778754443344579974699996899998799971255169999--87379974299899
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCE
Q ss_conf 32365443332012454410000000113578349997520220110442111110001332120354145665434310
Q gi|254780782|r 97 KIYGRGIVDMKGSIACFIAAVARFIPKYKNFGSISLLITGDEEGPAINGTKKMLSWIEKKGEKWDACIVGEPTCNHIIGD 176 (389)
Q Consensus 97 ~l~GrG~~D~Kg~ia~~l~a~~~l~~~~~~~~~i~~~~~~dEE~~~~~G~~~l~~~~~~~~~~~d~~i~~ep~~~~~~~~ 176 (389)
T Consensus 79 ~lyGRGa~D~Kg~iaa~l~Al~~l~~~~~~~~~i~~~~~~dEE~gg~~G~~~l~~~---~~~~~d~~iv~ept~~~---- 151 (371)
T PRK08651 79 KIYGRGASDMKGGIAAILAAFERLAEAGEKPSNVEVAFVPDEETGGETGTGYLAEK---GGIKPDYVIVAEPSGLD---- 151 (371)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHH---CCCCCCEEEEECCCCCC----
T ss_conf 99916623346899999999999997499999889999914345776435677663---15688999997799986----
Q ss_pred EEEEEEEEEEEEEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCC----------CCCCCEEEEEE-EEEECC
Q ss_conf 0123222357999999641231000000120134554432011223344566----------44210146676-554204
Q gi|254780782|r 177 TIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTGN----------TTFSPTNMEIT-TIDVGN 245 (389)
Q Consensus 177 ~i~~g~rG~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~----------~~~~~~~~~i~-~i~~g~ 245 (389)
T Consensus 152 ~v~~g~kG~~~~~i~v~G~~~Hss~P~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg 231 (371)
T PRK08651 152 NVCIGHRGLVWGIVKVYGKQAHGSTPWLGLNAFEKASKIALELQQELKEIVKIRLSKYEIIPPRGASPTVTLGGEVVKGG 231 (371)
T ss_pred CEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECC
T ss_conf 25883444899999986886434687767199999999999998645443101024545564336785488612388778
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 66655432116651343420677999999999987653242034311232226631125786789999999999998289
Q gi|254780782|r 246 PSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVFLTHDRKLTSLLSKSIYNTTGN 325 (389)
Q Consensus 246 ~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~l~~~l~~a~~~~~g~ 325 (389)
T Consensus 232 ~~~Nvip~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~G~ 310 (371)
T PRK08651 232 TKTNIVPGYFAFSVDRRLIPEEDLEEVIDELIALLDEVAKE-LGIKVEVEITDFSEPAYTDPDNELVEALREAIREVLGR 310 (371)
T ss_pred CCCCEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 52306367599999986399999999999999999987665-19469999876267311199998999999999998799
Q ss_pred CCEEEECCCCCHHHHHH-HCCCEEEEEECC-CCCCCCCCEEEHHHHHHHHHHHHHHHHHHC
Q ss_conf 95797414543588986-059899990047-873687840479999999999999999872
Q gi|254780782|r 326 IPLLSTSGGTSDARFIK-DYCPVIEFGLVG-RTMHALNENASLQDLEDLTCIYENFLQNWF 384 (389)
Q Consensus 326 ~~~~~~~gg~~d~~~~~-~~iP~v~fGp~~-~~~H~pdE~i~i~~l~~~~~~~~~~i~~~~ 384 (389)
T Consensus 311 ~~~~~~~~G~tDa~~~~~~gip~v~~Gpg~~~~aH~~nE~v~i~~l~~~~~iy~~~i~~Ll 371 (371)
T PRK08651 311 EPKKTICLGGTDARYFIKKGIPTVNYGPGELGLAHAPDEYVEVKDVENVAKVYKDLLKRLL 371 (371)
T ss_pred CCCEEEECCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHC
T ss_conf 9717876131759999875999999899985665798550999999999999999999869