HHsearch alignment for GI: 254780782 and conserved domain: TIGR03526
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=0 Score=503.73 Aligned_cols=369 Identities=21% Similarity=0.267 Sum_probs=304.4
Q ss_pred CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCC
Q ss_conf 98789999999964999789968999999999997798489997058887624899999879998899973368157888
Q gi|254780782|r 1 MTPDCLEHLIQLIKCPSVTPQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARFGTEAPHLMFAGHIDVVPPGD 80 (389)
Q Consensus 1 l~~e~v~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ill~~H~Dtvp~~~ 80 (389)
T Consensus 11 ~~~e~v~ll~~LV~ipS~sg~e~~~a~~l~~~l~~~Gf~~~~id-------~~~nv~~~~g~g~~~l~l~gH~DvVp~g~ 83 (395)
T TIGR03526 11 YRGDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEID-------PMGNVLGYIGHGPKLIAMDAHIDTVGIGD 83 (395)
T ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC-------CCCCEEEEECCCCCEEEEECCCCCCCCCC
T ss_conf 13779999999828999396789999999999987899779987-------88858999589996699979557369998
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC-CCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCC
Q ss_conf 77725666422452133236544333201245441000000011-35783499975202201104421111100013321
Q gi|254780782|r 81 FNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPKY-KNFGSISLLITGDEEGPAINGTKKMLSWIEKKGEK 159 (389)
Q Consensus 81 ~~~W~~~Pf~~~~~~g~l~GrG~~D~Kg~ia~~l~a~~~l~~~~-~~~~~i~~~~~~dEE~~~~~G~~~l~~~~~~~~~~ 159 (389)
T Consensus 84 ~~~W~~dPf~~~~~dg~iyGRGa~DmKgglaa~l~A~~~l~~~g~~~~~~~~~~~~~eEE~~~g~~~~~~~---~~~~~~ 160 (395)
T TIGR03526 84 MDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYII---EEDKIK 160 (395)
T ss_pred CCCCCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHH---HHCCCC
T ss_conf 77786899865887999982375656125999999999998558888942999996254477873899999---747999
Q ss_pred CCEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCC-CCCCCCEEEEE
Q ss_conf 20354145665434310012322235799999964123100000012013455443201122334456-64421014667
Q gi|254780782|r 160 WDACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTG-NTTFSPTNMEI 238 (389)
Q Consensus 160 ~d~~i~~ep~~~~~~~~~i~~g~rG~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~-~~~~~~~~~~i 238 (389)
T Consensus 161 ~d~~Iv~EPt~~-----~i~~~~kG~~~~~i~v~G~~aHss~p~~G~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~t~~~ 235 (395)
T TIGR03526 161 PEFVVITEPTDM-----NIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTV 235 (395)
T ss_pred CCEEEECCCCCC-----EEEEECCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
T ss_conf 998997689987-----699964448999999985045567865572999999999999999877524487778873588
Q ss_pred EEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-----------EEEEECCCCCCCCCCC
Q ss_conf 65542046665543211665134342067799999999998765324203431-----------1232226631125786
Q gi|254780782|r 239 TTIDVGNPSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLS-----------HTVHFSSPVSPVFLTH 307 (389)
Q Consensus 239 ~~i~~g~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~l~~~~~~~~~~~-----------~~i~~~~~~~p~~~~~ 307 (389)
T Consensus 236 ~~i~~g~~~~n~vp~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~ 314 (395)
T TIGR03526 236 SEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQGAE-AEVEMYEYDRPSYTGLVYPTECYFPTWVLPE 314 (395)
T ss_pred EEEECCCCCCCEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 868538861427898689999970699999999999999888652356-4255541356433676442000376556898
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCCHH-HHHH-HCCCEEEEEECC-CCCCCCCCEEEHHHHHHHHHHHHHHHHHHC
Q ss_conf 7899999999999982899579741454358-8986-059899990047-873687840479999999999999999872
Q gi|254780782|r 308 DRKLTSLLSKSIYNTTGNIPLLSTSGGTSDA-RFIK-DYCPVIEFGLVG-RTMHALNENASLQDLEDLTCIYENFLQNWF 384 (389)
Q Consensus 308 ~~~l~~~l~~a~~~~~g~~~~~~~~gg~~d~-~~~~-~~iP~v~fGp~~-~~~H~pdE~i~i~~l~~~~~~~~~~i~~~~ 384 (389)
T Consensus 315 d~~~v~~~~~~~~~~~g~~~~~~~~~~~td~~~~~~~~gip~V~fGPG~~~~aH~~dE~v~i~~l~~a~~iYa~i~~~~~ 394 (395)
T TIGR03526 315 DHLITKAALETYKRLFGKEPGVDKWTFSTNGVSIMGRHGIPVIGFGPGDEDQAHAPNEKTWKEDLVKAAAMYAAIPTVYL 394 (395)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
T ss_conf 67999999999999859998404531154669999874998999899985566676611899999999999999999972
Q ss_pred C
Q ss_conf 4
Q gi|254780782|r 385 I 385 (389)
Q Consensus 385 ~ 385 (389)
T Consensus 395 ~ 395 (395)
T TIGR03526 395 Q 395 (395)
T ss_pred C
T ss_conf 9