PSIBLAST alignment of GI: 254780782 and protein with PDB id: 3ic1
gi|259090306|pdb|3IC1|A Chain A, Crystal Structure Of Zinc-Bound Succinyl-Diaminopimelate Desuccinylase From Haemophilus Influenzae Length = 377
>gi|259090307|pdb|3IC1|B Chain B, Crystal Structure Of Zinc-Bound Succinyl-Diaminopimelate Desuccinylase From Haemophilus Influenzae Length = 377
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 155/388 (39%), Positives = 215/388 (55%), Gaps = 13/388 (3%)
Query: 1 MTPDCLEHLIQLIKCPSVTPQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARF 60
M + LI+ PS++P D G I+ L+ LGF IE F + NL+A+
Sbjct: 1 MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPF-----NDTLNLWAKH 55
Query: 61 GTEAPHLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARF 120
GT P + FAGH DVVP GD N W+ PPFSA I +G +YGRG DMKGS+A I A +
Sbjct: 56 GTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEY 115
Query: 121 IPKYKNF-GSISLLITGDEEGPAINGTKKMLSWIEKKGEKWDACIVGEPTCNHIIGDTIK 179
+ N G+I+LLIT DEE A +GT ++ + + EK C+VGEP+ +GD +K
Sbjct: 116 VKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVK 175
Query: 180 IGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTGNTTFSPTNMEIT 239
GRRGS++G + I G QGHVAYPHL ENPI L +LT +D GN F PT+++I
Sbjct: 176 NGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIA 235
Query: 240 TIDVGNPSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSP 299
I G S NVIPA++ + FN+R+ ++ +K+++ L K + + ++
Sbjct: 236 NIHAGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLK-----YRIEWNLS 290
Query: 300 VSPVFLTHDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDARFIK-DYCPVIEFGLVGRTMH 358
P FLT KL ++ +I T G P T GGTSD RFI V+EFG + T+H
Sbjct: 291 GKP-FLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIH 349
Query: 359 ALNENASLQDLEDLTCIYENFLQNWFIT 386
+NE S++DL IY L N +
Sbjct: 350 KVNECVSVEDLGKCGEIYHKMLVNLLDS 377