RPSBLAST alignment for GI: 254780782 and conserved domain: PRK08651
>gnl|CDD|181522 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed. Length = 394
Score = 207 bits (528), Expect = 6e-54
Identities = 131/404 (32%), Positives = 184/404 (45%), Gaps = 42/404 (10%)
Query: 1 MTPDCLEHLIQLIKCPSVTPQD---GGAFFILVNTLKLLGFSIE----EKDFQTKNTSIV 53
M D +E L LIK P+V P L +TL+ LGFS E ++ K+
Sbjct: 4 MMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPR 63
Query: 54 KNLYARFGTEAPHLMFAGHIDVVPPGDFNHWTYP-PFSATIAEGKIYGRGIVDMKGSIAC 112
NL AR G+ PHL F GH DVVPPG+ W+ PF + +GK+YGRG DMKG IA
Sbjct: 64 PNLIARRGSGNPHLHFNGHYDVVPPGE--GWSVNVPFEPKVKDGKVYGRGASDMKGGIAA 121
Query: 113 FIAAVARFIPKYKNFGSISLLITGDEE--GPAINGTKKMLSWIEKKGEKWDACIVGEPTC 170
+AA R P G+I L I DEE G GT ++ E+ D IVGEP+
Sbjct: 122 LLAAFERLDPAGD--GNIELAIVPDEETGG---TGTGYLV---EEGKVTPDYVIVGEPS- 172
Query: 171 NHIIG-DTIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFD-TGN 228
G D I IG RG + G + ++GKQ H + P L N + +L +
Sbjct: 173 ----GLDNICIGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSK 228
Query: 229 TTFSPTNMEITTIDVGNP------SKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIK 282
+ T+ +G P N++P S + R + E EE+R L
Sbjct: 229 YEYDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRL--IPEETA--EEVRDELEA 284
Query: 283 GIQNV-PKLSHTVHFS-SPVSPVFLT-HDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDAR 339
+ V P+L V F +P S F+T D +L L ++I G P + S G +DAR
Sbjct: 285 LLDEVAPELGIEVEFEITPFSEAFVTDPDSELVKALREAIREVLGVEPKKTISLGGTDAR 344
Query: 340 FIKDYC-PVIEFGLVGRTM-HALNENASLQDLEDLTCIYENFLQ 381
F P + +G + HA +E ++D+E +YE L+
Sbjct: 345 FFGAKGIPTVVYGPGELELAHAPDEYVEVKDVEKAAKVYEEVLK 388