RPSBLAST alignment of GI: 254780782 and protein with PDBid: 1ylo

>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, protein structure initiative, midwest center for structural genomics; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Length = 348

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 42/380 (11%), Positives = 98/380 (25%), Gaps = 53/380 (13%)

Query: 6   LEHLIQLIKCPSVTPQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARF-GTEA 64
           L  L  L +  ++   +     IL+     L   +              ++  R   +  
Sbjct: 6   LSLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFDGL--------GSVLIRLNESTG 57

Query: 65  PHLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPKY 124
           P +M   H+D V              +   EG I    + +++ +             + 
Sbjct: 58  PKVMICAHMDEVGFM---------VRSISREGAIDVLPVGNVRMAARQLQPVRITTREEC 108

Query: 125 KNFGSISLLITGDEEGPAINGTKKMLSWIEKKGEKWDACIVGEPTCNHIIGDTIKIGRRG 184
           K  G +     G++                          +G  T + ++   I+ G R 
Sbjct: 109 KIPGLLDGDRQGNDVSA-------------------MRVDIGARTYDEVMQAGIRPGDRV 149

Query: 185 SLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTGNTTFSPTNMEITTIDVG 244
           +      +   Q  +            L+ LL +L +            ++ E   +  G
Sbjct: 150 TFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDA-ELPAEVWLVASSSEEVGLRGG 208

Query: 245 NPSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVF 304
             +   +   V +  +        +       +      +        ++     ++   
Sbjct: 209 QTATRAVSPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSD---KSLIAPPKLTAWI 265

Query: 305 LTHDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDARFIKDY--CPVIEFGLVGRTMHALNE 362
            T   +                  + ++GGT            P +  G   R  H    
Sbjct: 266 ETVAAE----------IGVPLQADMFSNGGTDGGAVHLTGTGVPTLVMGPATRHGHCAAS 315

Query: 363 NASLQDLEDLTCIYENFLQN 382
            A  +D+  +  +    +Q 
Sbjct: 316 IADCRDILQMEQLLSALIQR 335