RPSBLAST alignment of GI: 254780782 and protein with PDBid: 2cf4
>2cf4_A Protein PH0519, phtet1-12S; aminopeptidase, metalloprotein, hyperthermophIle, archaea, tetrahedral, hydrolase; 3.08A {Pyrococcus horikoshii} Length = 332
Score = 117 bits (293), Expect = 4e-27
Identities = 47/377 (12%), Positives = 96/377 (25%), Gaps = 50/377 (13%)
Query: 6 LEHLIQLIKCPSVTPQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARFGTEAP 65
+E L + + P ++ + ++ +K + + NL G
Sbjct: 5 IEKLKKFTQIPGISGYEERIREEIIREIKDFADYKVDA---------IGNLIVELGEGEE 55
Query: 66 HLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPKYK 125
++F H+D + + G +D + + V K
Sbjct: 56 RILFMAHMDEIGLLITGITDEGKL-------RFRKVGGIDDRLLYGRHVNVVTE---KGI 105
Query: 126 NFGSISLLITGDEEGPAINGTKKMLSWIEKKGEKWDACIVGEPTCNHIIGDTIKIGRRGS 185
G I + +D I + +K
Sbjct: 106 LDGVIGATPPHLSLERDKSVIPW-----------YDLVIDIGAESKEEALELVKPLDFAV 154
Query: 186 LSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTGNTTFSPTNMEITTIDVGN 245
++ + + LI + L + + G F+ T E +
Sbjct: 155 FKKHFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHELE-GKVIFAFTVQEEVGLKGAK 213
Query: 246 PSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVFL 305
N Q + + +K V + S ++
Sbjct: 214 FLANHYYPQYAFAIDSFACCSPLTGDVKLGK---------------GPVIRAVDNSAIYS 258
Query: 306 THDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDARFIKDYCPVIEFGLVGRTMHALNENAS 365
+ SI G + +GG +DA +D + + + +H+ E
Sbjct: 259 RDLARKV----WSIAEKNGIEIQIGVTGGGTDASAFQDRSKTLALSVPIKYLHSEVETLH 314
Query: 366 LQDLEDLTCIYENFLQN 382
L DLE L + E
Sbjct: 315 LNDLEKLVKLIEALAFE 331