RPSBLAST alignment of GI: 254780782 and protein with PDBid: 3pfo
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433
Score = 241 bits (615), Expect = 2e-64
Identities = 76/412 (18%), Positives = 135/412 (32%), Gaps = 41/412 (9%)
Query: 3 PDCLEHLIQLIKCPSVTPQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVK-------- 54
D + L ++++ SV ++ L G+ ++ + +
Sbjct: 26 NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTI 85
Query: 55 ------NLYARFGT--EAPHLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRGIVDM 106
+ A + + L+ GHIDVVP G + W+ PP+ A + +G + GRG DM
Sbjct: 86 DPAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDM 145
Query: 107 KGSIACFIAAVARFIPKYKNFGSISLLITGDEEGPAINGTKKMLSWIEKKGEKWDACIVG 166
KG ++ I A+ + + T EE NG L +G + DAC++
Sbjct: 146 KGGVSAMIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTL----MRGYRADACLIP 201
Query: 167 EPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDT 226
EPT + + + G++ + + G HVAY + I + L+ +
Sbjct: 202 EPTGHTLT-----RAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIRAFEEYTKEL 256
Query: 227 GNTTFS---------PTNMEITTIDVGNPSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIR 277
P + I G + A ++ + + I
Sbjct: 257 NAQAVRDPWFGQVKNPIKFNVGIIK-GGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIE 315
Query: 278 SRLIKGIQNVPKLSHT----VHFSSPVSPVFLTHDRKLTSLLSKSIYNTTGNIPLLSTSG 333
L LS V P +L+ + S
Sbjct: 316 KCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLST 375
Query: 334 GTSDARFIKDY--CPVIEFGLVGRTMHALNENASLQDLEDLTCIYENFLQNW 383
+D R+ P + +G G+ HA +E L+ L T F+ W
Sbjct: 376 AVNDTRYYSVDYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFVAEW 427