HHsearch results for GI: 254780783 and protein with PDBid: 2jsp_A
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.5e-38 Score=264.03 Aligned_cols=85 Identities=60% Similarity=1.002 Sum_probs=80.4
Q ss_pred CCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 78545899857365138884597436100025899986743999899999727379883229999999999999819981
Q gi|254780783|r 59 VQPERLKPAVPIRKSIENGCLYCLEDGMQFKSLKRHLKTHHNMTPDEYRIKWNLASDYPMVSREYATTRSKLAKNMGLGR 138 (149)
Q Consensus 59 ~~~~~~~PAv~i~kSi~~d~iiClecGk~~K~LkRHL~t~hgLtp~eYR~kwGLp~dyPlvAp~Ys~~Rs~~Ak~~GLg~ 138 (149)
++.+.+.|||+|++||++|+||||||||+||||+|||++.|||||+|||+|||||+|||||||+||++||++||++|||+
T Consensus 2 ~~~e~~~Pav~i~kSi~~d~iiClecGk~~k~LkRHL~~~hgltp~eYR~kwGlp~dyPlva~~ys~~Rs~~ak~~gLg~ 81 (87)
T 2jsp_A 2 VNVEKQKPAVSVRKSVQDDHIVCLECGGSFKSLKRHLTTHHSMTPEEYREKWDLPVDYPMVAPAYAEARSRLAKEMGLGQ 81 (87)
T ss_dssp CCSSCCBCCCCSSTTBCSSCEECTBTCCEESBHHHHHHHTTCSCHHHHHHHTTCGGGCCSBCTTTTTTTTTSSCCSSCSC
T ss_pred CCCCCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCH
T ss_conf 87566899988666468980587127830558999988871989999999809899985629999999999999837525
Q ss_pred CHHHH
Q ss_conf 01005
Q gi|254780783|r 139 GRKKR 143 (149)
Q Consensus 139 ~~rk~ 143 (149)
++++.
T Consensus 82 kr~~~ 86 (87)
T 2jsp_A 82 RRKAN 86 (87)
T ss_dssp SSCCC
T ss_pred HHHCC
T ss_conf 33222