Query         gi|254780783|ref|YP_003065196.1| transcription regulator protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 149
No_of_seqs    114 out of 407
Neff          4.8 
Searched_HMMs 23785
Date          Mon May 30 13:27:53 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780783.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2jsp_A Transcriptional regulat 100.0 4.5E-38 1.9E-42  264.0   0.1   85   59-143     2-86  (87)
  2 3mkl_A HTH-type transcriptiona  80.2     0.5 2.1E-05   26.8   1.3   35   78-112    75-110 (120)
  3 2ctd_A Zinc finger protein 512  77.9    0.66 2.8E-05   26.0   1.3   26   75-101    31-60  (96)
  4 2wbt_A B-129; zinc finger; 2.7  74.6     1.1 4.7E-05   24.6   1.8   19   79-97     75-96  (129)
  5 2ct5_A Zinc finger BED domain   70.7     1.8 7.4E-05   23.3   2.0   34   73-109    24-63  (73)
  6 1wir_A Protein arginine N-meth  70.3     3.4 0.00014   21.5   3.4   49   77-126    14-66  (121)
  7 1d4u_A Nucleotide excision rep  69.5     1.1 4.8E-05   24.5   0.8   16   74-89      1-16  (111)
  8 3oio_A Transcriptional regulat  65.6     1.9 7.9E-05   23.1   1.3   35   79-113    77-112 (113)
  9 3oou_A LIN2118 protein; protei  65.3     1.7 7.2E-05   23.4   1.0   31   80-110    76-107 (108)
 10 2gqj_A Zinc finger protein KIA  59.1     4.6 0.00019   20.6   2.4   34   67-100    12-50  (98)
 11 1pqv_S STP-alpha, transcriptio  57.3     2.3 9.5E-05   22.6   0.5   18   31-48     57-74  (309)
 12 2epa_A Krueppel-like factor 10  55.6     3.9 0.00016   21.1   1.5   26   78-103    17-47  (72)
 13 3eyy_A Putative iron uptake re  54.7      12 0.00052   17.9   4.8   77   26-103    30-122 (145)
 14 1fs1_B SKP1, cyclin A/CDK2-ass  52.9     5.1 0.00021   20.4   1.7   18   99-116   122-139 (141)
 15 3mn2_A Probable ARAC family tr  51.5     4.4 0.00019   20.8   1.2   31   80-110    75-106 (108)
 16 2p1m_A SKP1-like protein 1A; F  49.3     8.3 0.00035   19.0   2.4   19   99-117   126-144 (160)
 17 1bl0_A Protein (multiple antib  47.4     5.2 0.00022   20.3   1.1   34   79-112    81-115 (129)
 18 1wjp_A Zinc finger protein 295  47.4     6.9 0.00029   19.5   1.7   24   77-100    68-94  (107)
 19 3gbg_A TCP pilus virulence reg  47.3     5.5 0.00023   20.1   1.2   31   80-111   191-221 (276)
 20 2em5_A ZFP-95, zinc finger pro  46.9     4.8  0.0002   20.5   0.8   27   77-103    11-40  (46)
 21 2ej4_A Zinc finger protein ZIC  46.5     5.2 0.00022   20.3   1.0   23   78-100    25-50  (95)
 22 1dvp_A HRS, hepatocyte growth   46.4     3.4 0.00014   21.5  -0.0   55   37-95    124-179 (220)
 23 2em4_A Zinc finger protein 28   45.1     6.9 0.00029   19.5   1.4   27   77-103    11-40  (46)
 24 2adr_A ADR1; transcription reg  43.8     5.7 0.00024   20.1   0.8   21   79-99     31-54  (60)
 25 2emi_A Zinc finger protein 484  43.7     7.7 0.00032   19.2   1.5   28   76-103    10-40  (46)
 26 1mzb_A Ferric uptake regulatio  43.5      18 0.00078   16.8   4.3   86   17-103    20-123 (136)
 27 2eos_A B-cell lymphoma 6 prote  42.9     5.9 0.00025   20.0   0.8   27   77-103    10-39  (42)
 28 2k9s_A Arabinose operon regula  42.5     6.8 0.00029   19.6   1.1   96   13-109     4-105 (107)
 29 2ast_A S-phase kinase-associat  42.4      12 0.00052   17.9   2.4   19   99-117   127-145 (159)
 30 2gli_A Protein (five-finger GL  40.4     9.5  0.0004   18.6   1.5   25   76-100   126-155 (155)
 31 3mks_A Suppressor of kinetocho  40.4      13 0.00054   17.8   2.2   19   99-117   134-152 (169)
 32 2el6_A Zinc finger protein 268  39.7     9.4  0.0004   18.7   1.4   28   76-103    10-40  (46)
 33 2ep1_A Zinc finger protein 484  39.1     9.5  0.0004   18.6   1.3   26   78-103    12-40  (46)
 34 2eoe_A Zinc finger protein 347  38.8      12 0.00052   17.9   1.9   27   77-103    11-40  (46)
 35 2em9_A Zinc finger protein 224  37.5      10 0.00043   18.4   1.3   27   77-103    11-40  (46)
 36 2en6_A Zinc finger protein 268  37.0      13 0.00054   17.8   1.7   28   76-103    10-40  (46)
 37 2drp_A Protein (tramtrack DNA-  36.7      13 0.00053   17.8   1.7   22   79-100    41-65  (66)
 38 2ytq_A Zinc finger protein 268  36.0      10 0.00042   18.5   1.1   27   77-103    11-40  (46)
 39 2elr_A Zinc finger protein 406  35.8     9.1 0.00038   18.7   0.8   21   76-96      7-30  (36)
 40 2emx_A Zinc finger protein 268  35.7      12 0.00052   17.9   1.5   28   76-103     8-38  (44)
 41 2d9h_A Zinc finger protein 692  35.6      11 0.00047   18.2   1.3   22   79-100    39-63  (78)
 42 2ep2_A Zinc finger protein 484  35.4      11 0.00048   18.1   1.3   27   77-103    11-40  (46)
 43 1ard_A Yeast transcription fac  35.3      10 0.00044   18.4   1.1   22   79-100     3-27  (29)
 44 2yto_A Zinc finger protein 484  35.0      13 0.00056   17.7   1.6   27   77-103    11-40  (46)
 45 2emb_A Zinc finger protein 473  34.8      11 0.00045   18.3   1.1   27   76-102    10-39  (44)
 46 2rpc_A Zinc finger protein ZIC  34.7     9.5  0.0004   18.6   0.8   28   75-102    22-52  (155)
 47 2ebt_A Krueppel-like factor 5;  34.6      19 0.00081   16.7   2.3   26   79-104    16-46  (100)
 48 2en3_A ZFP-95, zinc finger pro  34.4     8.7 0.00037   18.9   0.6   28   76-103    10-40  (46)
 49 2j7j_A Transcription factor II  34.3      11 0.00047   18.2   1.1   17   81-97     67-83  (85)
 50 2ct1_A Transcriptional repress  34.2      14 0.00058   17.6   1.6   21   79-99     16-39  (77)
 51 2epr_A POZ-, at HOOK-, and zin  34.2      15 0.00063   17.4   1.7   27   76-102    10-39  (48)
 52 2epq_A POZ-, at HOOK-, and zin  34.2      16 0.00067   17.2   1.9   28   76-103     8-38  (45)
 53 2yso_A ZFP-95, zinc finger pro  33.8      12 0.00052   17.9   1.3   27   77-103    11-40  (46)
 54 3lsg_A Two-component response   33.8     8.3 0.00035   19.0   0.4   29   80-108    74-103 (103)
 55 2enh_A Zinc finger protein 28   33.5      11 0.00048   18.1   1.0   28   76-103    10-40  (46)
 56 2ely_A Zinc finger protein 224  33.3      14 0.00061   17.5   1.5   26   78-103    12-40  (46)
 57 2epw_A Zinc finger protein 268  33.3      13 0.00055   17.7   1.3   27   77-103    11-40  (46)
 58 2o8i_A AGR_C_4230P, hypothetic  33.2      12 0.00052   17.9   1.2   12  104-115   105-116 (165)
 59 2epv_A Zinc finger protein 268  33.0      14 0.00059   17.5   1.4   28   76-103    10-40  (44)
 60 2epc_A Zinc finger protein 32;  32.5      13 0.00057   17.7   1.3   27   77-103    10-39  (42)
 61 2el5_A Zinc finger protein 268  32.5      14 0.00059   17.5   1.4   27   77-103     9-38  (42)
 62 2eoo_A ZFP-95, zinc finger pro  32.5      11 0.00047   18.2   0.8   28   76-103    10-40  (46)
 63 2em2_A Zinc finger protein 28   32.4      16 0.00067   17.2   1.6   28   76-103    10-40  (46)
 64 2yu5_A Zinc finger protein 473  32.4      12 0.00049   18.0   0.9   25   77-101    11-38  (44)
 65 2q37_A OHCU decarboxylase; 2-O  32.3      13 0.00055   17.8   1.2   11  104-114   121-131 (181)
 66 2epz_A Zinc finger protein 28   32.1      12 0.00052   17.9   1.0   28   76-103    10-40  (46)
 67 2eq1_A Zinc finger protein 347  32.1      12  0.0005   18.0   0.9   26   78-103    12-40  (46)
 68 2ema_A Zinc finger protein 347  31.9      13 0.00056   17.7   1.2   28   76-103    10-40  (46)
 69 2ytg_A ZFP-95, zinc finger pro  31.8     9.2 0.00039   18.7   0.3   27   77-103    11-40  (46)
 70 2ent_A Krueppel-like factor 15  31.8      13 0.00054   17.8   1.1   26   78-103    12-42  (48)
 71 2emk_A Zinc finger protein 28   31.8      15 0.00065   17.3   1.5   27   77-103    11-40  (46)
 72 2emg_A Zinc finger protein 484  31.6      13 0.00054   17.8   1.0   27   77-103    11-40  (46)
 73 2ytt_A Zinc finger protein 473  31.5     9.5  0.0004   18.6   0.4   27   77-103    11-40  (46)
 74 2eow_A Zinc finger protein 347  31.4      16 0.00067   17.2   1.5   28   76-103    10-40  (46)
 75 2o70_A OHCU decarboxylase; URI  31.3      14 0.00059   17.6   1.2   12  104-115   109-120 (174)
 76 2k5e_A Uncharacterized protein  31.2      29  0.0012   15.5   2.8   34   76-110    27-61  (73)
 77 2en2_A B-cell lymphoma 6 prote  31.1      12 0.00049   18.0   0.8   27   77-103    10-39  (42)
 78 3o7i_A OHCU decarboxylase; lya  30.6      14 0.00061   17.5   1.2   20  104-125   130-149 (189)
 79 2en8_A Zinc finger protein 224  30.3      14  0.0006   17.5   1.1   28   76-103    10-40  (46)
 80 2ept_A Zinc finger protein 32;  30.2      13 0.00054   17.8   0.8   28   76-103     8-38  (41)
 81 2em6_A Zinc finger protein 224  30.1      12 0.00052   17.9   0.7   28   76-103    10-40  (46)
 82 2eof_A Zinc finger protein 268  30.1      17 0.00073   16.9   1.5   25   76-100    10-37  (44)
 83 2en9_A Zinc finger protein 28   30.0      17  0.0007   17.1   1.4   26   78-103    12-40  (46)
 84 2eme_A Zinc finger protein 473  29.9      17 0.00073   16.9   1.5   28   76-103    10-40  (46)
 85 2ep0_A Zinc finger protein 28   29.5      15 0.00061   17.4   1.0   27   77-103    11-40  (46)
 86 1x5w_A Zinc finger protein 64,  29.4      15 0.00064   17.3   1.1   25   77-101    36-63  (70)
 87 2eoh_A Zinc finger protein 28   29.4      16 0.00069   17.1   1.3   28   76-103    10-40  (46)
 88 2eps_A POZ-, at HOOK-, and zin  29.3      16 0.00067   17.2   1.2   21   79-99     13-36  (54)
 89 1x6h_A Transcriptional repress  28.9      25   0.001   16.0   2.1   25   78-102    47-74  (86)
 90 2ytj_A Zinc finger protein 484  28.9      17 0.00071   17.0   1.3   28   76-103    10-40  (46)
 91 2eop_A Zinc finger protein 268  28.8      15 0.00062   17.4   1.0   27   77-103    11-40  (46)
 92 1p7a_A BF3, BKLF, kruppel-like  28.4      21 0.00087   16.5   1.7   21   77-97     10-33  (37)
 93 2ytk_A Zinc finger protein 347  28.4      19 0.00079   16.7   1.4   28   76-103    10-40  (46)
 94 2ene_A Zinc finger protein 347  28.3      16 0.00069   17.1   1.1   27   77-103    11-40  (46)
 95 2em7_A Zinc finger protein 224  27.9      17  0.0007   17.1   1.1   28   76-103    10-40  (46)
 96 2eq3_A Zinc finger protein 347  27.7      17 0.00071   17.1   1.1   27   77-103    11-40  (46)
 97 2eq0_A Zinc finger protein 347  27.5      17 0.00072   17.0   1.1   27   77-103    11-40  (46)
 98 2eor_A Zinc finger protein 224  27.3      19 0.00078   16.8   1.2   28   76-103    10-40  (46)
 99 2w57_A Ferric uptake regulatio  27.2      34  0.0014   15.1   2.7   86   16-102    18-121 (150)
100 2em3_A Zinc finger protein 28   27.2      22 0.00091   16.3   1.6   27   77-103    11-40  (46)
101 2czr_A TBP-interacting protein  27.1      20 0.00084   16.6   1.4   27   78-105   154-182 (226)
102 2yte_A Zinc finger protein 473  27.0      21 0.00089   16.4   1.5   24   77-100     9-35  (42)
103 1ncs_A Peptide M30F, transcrip  26.9      20 0.00083   16.6   1.3   26   73-98     13-43  (47)
104 2emm_A ZFP-95, zinc finger pro  26.8      22 0.00093   16.3   1.5   28   76-103    10-40  (46)
105 2emj_A Zinc finger protein 28   26.6      22 0.00093   16.3   1.5   27   77-103    11-40  (46)
106 2en1_A Zinc finger protein 224  26.4      21 0.00088   16.4   1.4   28   76-103    10-40  (46)
107 2enc_A Zinc finger protein 224  26.4      20 0.00084   16.6   1.3   28   76-103    10-40  (46)
108 2eoj_A Zinc finger protein 268  26.3      20 0.00085   16.6   1.3   26   77-102    11-39  (44)
109 2em0_A Zinc finger protein 224  26.2      17 0.00072   17.0   0.9   28   76-103    10-40  (46)
110 2ytb_A Zinc finger protein 32;  26.1      12 0.00052   17.9   0.2   27   77-103    10-39  (42)
111 1d5y_A ROB transcription facto  26.1      35  0.0015   15.0   2.5   30   80-109    74-104 (292)
112 2elz_A Zinc finger protein 224  26.0      19 0.00079   16.8   1.1   28   76-103    10-40  (46)
113 2elt_A Zinc finger protein 406  25.9      22 0.00091   16.3   1.4   23   78-100     9-34  (36)
114 2yts_A Zinc finger protein 484  25.7      21 0.00089   16.4   1.3   27   77-103    11-40  (46)
115 2emp_A Zinc finger protein 347  25.2      19 0.00081   16.7   1.0   28   76-103    10-40  (46)
116 2cot_A Zinc finger protein 435  25.0      20 0.00085   16.5   1.1   19   79-97     19-40  (77)
117 2eoy_A Zinc finger protein 473  25.0      17  0.0007   17.1   0.7   27   77-103    11-40  (46)
118 1llm_C Chimera of ZIF23-GCN4;   24.9      20 0.00084   16.6   1.0   24   77-100    30-56  (88)
119 1x6e_A Zinc finger protein 24;  24.8      27  0.0011   15.8   1.7   19   79-97     15-36  (72)
120 2ytr_A Zinc finger protein 347  24.6      19 0.00081   16.7   0.9   27   77-103    11-40  (46)
121 2emh_A Zinc finger protein 484  24.5      20 0.00083   16.6   1.0   28   76-103    10-40  (46)
122 2yu8_A Zinc finger protein 347  24.5      21 0.00087   16.5   1.1   27   77-103    11-40  (46)
123 2ytf_A Zinc finger protein 268  24.4      21 0.00088   16.4   1.1   27   77-103    11-40  (46)
124 1a1h_A QGSR zinc finger peptid  24.1      22 0.00091   16.3   1.1   26   75-100    59-87  (90)
125 2k53_A A3DK08 protein; NESG, C  23.8      34  0.0014   15.1   2.1   32   77-109    26-58  (76)
126 2ep3_A Zinc finger protein 484  23.7      20 0.00082   16.6   0.8   28   76-103    10-40  (46)
127 1kl7_A Threonine synthase; thr  23.7      39  0.0016   14.7   2.8   31   13-43     58-88  (514)
128 2yrj_A Zinc finger protein 473  23.2      23 0.00098   16.1   1.1   27   77-103    11-40  (46)
129 2eou_A Zinc finger protein 473  23.2      24 0.00099   16.1   1.1   23   78-100    12-37  (44)
130 2osz_A Nucleoporin P58/P45; NP  23.1      40  0.0017   14.6   4.8   38   14-51     28-65  (93)
131 2ytd_A Zinc finger protein 473  23.0      30  0.0012   15.5   1.6   26   76-101    10-38  (46)
132 2epx_A Zinc finger protein 28   22.4      21 0.00088   16.4   0.8   22   78-99     12-36  (47)
133 2yti_A Zinc finger protein 347  22.4      23 0.00098   16.1   1.0   26   78-103    12-40  (46)
134 2kvf_A Zinc finger and BTB dom  22.3      17 0.00073   17.0   0.3   20   79-99      4-23  (28)
135 1f2i_G Fusion of N-terminal 17  22.1      27  0.0012   15.7   1.3   25   79-103    20-49  (73)
136 3abq_B Ethanolamine ammonia-ly  22.1      20 0.00084   16.6   0.6   92   22-140     4-95  (306)
137 2ytm_A Zinc finger protein 28   22.1      25   0.001   16.0   1.1   26   78-103    12-40  (46)
138 2eox_A Zinc finger protein 473  21.9      18 0.00074   16.9   0.3   27   76-102    10-39  (44)
139 2ytn_A Zinc finger protein 347  21.8      24   0.001   16.1   1.0   28   76-103    10-40  (46)
140 2fe3_A Peroxide operon regulat  21.8      43  0.0018   14.5   2.5   74   26-102    34-124 (145)
141 2eom_A ZFP-95, zinc finger pro  21.6      27  0.0011   15.7   1.2   27   77-103    11-40  (46)
142 2ytp_A Zinc finger protein 484  21.4      22 0.00091   16.4   0.7   27   77-103    11-40  (46)
143 2o03_A Probable zinc uptake re  21.4      44  0.0018   14.4   5.2   85   19-104    15-116 (131)
144 2qfa_A Baculoviral IAP repeat-  21.1      25  0.0011   15.9   0.9   31   75-111    51-81  (142)
145 3boq_A Transcriptional regulat  21.1      39  0.0016   14.7   1.9   22   91-112    35-56  (160)
146 2yrm_A B-cell lymphoma 6 prote  20.8      39  0.0017   14.7   1.9   27   75-101     7-36  (43)
147 2eq4_A Zinc finger protein 224  20.6      26  0.0011   15.8   0.9   27   77-103    11-40  (46)
148 2el4_A Zinc finger protein 268  20.5      25  0.0011   15.9   0.9   27   77-103    11-40  (46)
149 1lva_A Selenocysteine-specific  20.5      36  0.0015   14.9   1.6   32   86-117   202-233 (258)
150 2eov_A Zinc finger protein 484  20.3      35  0.0015   15.0   1.5   27   77-103    11-40  (46)
151 2eml_A Zinc finger protein 28   20.2      34  0.0014   15.1   1.5   27   77-103    11-40  (46)
152 1dtd_B Metallocarboxypeptidase  20.2      27  0.0011   15.7   0.9   13   74-86      7-19  (61)
153 2en7_A Zinc finger protein 268  20.2      25   0.001   16.0   0.7   25   77-101    11-38  (44)
154 2enf_A Zinc finger protein 347  20.1      25   0.001   16.0   0.7   26   78-103    12-40  (46)

No 1  
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=100.00  E-value=4.5e-38  Score=264.03  Aligned_cols=85  Identities=60%  Similarity=1.002  Sum_probs=80.4

Q ss_pred             CCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             78545899857365138884597436100025899986743999899999727379883229999999999999819981
Q gi|254780783|r   59 VQPERLKPAVPIRKSIENGCLYCLEDGMQFKSLKRHLKTHHNMTPDEYRIKWNLASDYPMVSREYATTRSKLAKNMGLGR  138 (149)
Q Consensus        59 ~~~~~~~PAv~i~kSi~~d~iiClecGk~~K~LkRHL~t~hgLtp~eYR~kwGLp~dyPlvAp~Ys~~Rs~~Ak~~GLg~  138 (149)
                      ++.+.+.|||+|++||++|+||||||||+||||+|||++.|||||+|||+|||||+|||||||+||++||++||++|||+
T Consensus         2 ~~~e~~~Pav~i~kSi~~d~iiClecGk~~k~LkRHL~~~hgltp~eYR~kwGlp~dyPlva~~ys~~Rs~~ak~~gLg~   81 (87)
T 2jsp_A            2 VNVEKQKPAVSVRKSVQDDHIVCLECGGSFKSLKRHLTTHHSMTPEEYREKWDLPVDYPMVAPAYAEARSRLAKEMGLGQ   81 (87)
T ss_dssp             CCSSCCBCCCCSSTTBCSSCEECTBTCCEESBHHHHHHHTTCSCHHHHHHHTTCGGGCCSBCTTTTTTTTTSSCCSSCSC
T ss_pred             CCCCCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCH
T ss_conf             87566899988666468980587127830558999988871989999999809899985629999999999999837525


Q ss_pred             CHHHH
Q ss_conf             01005
Q gi|254780783|r  139 GRKKR  143 (149)
Q Consensus       139 ~~rk~  143 (149)
                      ++++.
T Consensus        82 kr~~~   86 (87)
T 2jsp_A           82 RRKAN   86 (87)
T ss_dssp             SSCCC
T ss_pred             HHHCC
T ss_conf             33222


No 2  
>3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli}
Probab=80.19  E-value=0.5  Score=26.84  Aligned_cols=35  Identities=17%  Similarity=0.168  Sum_probs=27.5

Q ss_pred             CEEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHCCC
Q ss_conf             459743610-00258999867439998999997273
Q gi|254780783|r   78 CLYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKWNL  112 (149)
Q Consensus        78 ~iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kwGL  112 (149)
                      .-|+.+||= ....+.|.....+|+||.+||.++.=
T Consensus        75 ~~IA~~~Gf~~~s~f~r~Fk~~~G~tP~~yR~~~~~  110 (120)
T 3mkl_A           75 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ  110 (120)
T ss_dssp             HHHHHHTTCSCHHHHHHHHHHHHSSCHHHHHHHC--
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf             999999789988999999999999099999997661


No 3  
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=77.92  E-value=0.66  Score=26.04  Aligned_cols=26  Identities=23%  Similarity=0.419  Sum_probs=16.2

Q ss_pred             CCCCEEECCCCH-HHH---HHHHHHHHHCCC
Q ss_conf             888459743610-002---589998674399
Q gi|254780783|r   75 ENGCLYCLEDGM-QFK---SLKRHLKTHHNM  101 (149)
Q Consensus        75 ~~d~iiClecGk-~~K---~LkRHL~t~hgL  101 (149)
                      ......|=+||+ .|+   .|++|+.. |+-
T Consensus        31 ~~~~~~C~~C~k~~f~~~~~l~~H~~~-h~~   60 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMEN-CKQ   60 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHH-HCC
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHH-CCC
T ss_conf             898979999993546399999999988-589


No 4  
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=74.62  E-value=1.1  Score=24.58  Aligned_cols=19  Identities=37%  Similarity=0.551  Sum_probs=9.3

Q ss_pred             EEECCCCHHHH---HHHHHHHH
Q ss_conf             59743610002---58999867
Q gi|254780783|r   79 LYCLEDGMQFK---SLKRHLKT   97 (149)
Q Consensus        79 iiClecGk~~K---~LkRHL~t   97 (149)
                      -.|-+|||.|+   .|+||+++
T Consensus        75 y~C~~C~k~F~~~~~L~~H~r~   96 (129)
T 2wbt_A           75 FVCPLCLMPFSSSVSLKQHIRY   96 (129)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH
T ss_pred             EECCCCCCCCCCHHHHHHHHEE
T ss_conf             1889999871874461446230


No 5  
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=70.74  E-value=1.8  Score=23.33  Aligned_cols=34  Identities=26%  Similarity=0.401  Sum_probs=25.1

Q ss_pred             HCCCCCEEECCCCHHHH------HHHHHHHHHCCCCHHHHHHH
Q ss_conf             13888459743610002------58999867439998999997
Q gi|254780783|r   73 SIENGCLYCLEDGMQFK------SLKRHLKTHHNMTPDEYRIK  109 (149)
Q Consensus        73 Si~~d~iiClecGk~~K------~LkRHL~t~hgLtp~eYR~k  109 (149)
                      .+....++|-.|++.|+      .|.|||...|   |+||.+-
T Consensus        24 ~~~~~~a~C~~C~~~~~~~g~Ts~L~~HL~~~H---~~e~~~~   63 (73)
T 2ct5_A           24 ILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNH---PEEFCEF   63 (73)
T ss_dssp             GGGSSCCEETTTTEECCCCSSTHHHHHHHHHSC---HHHHHHH
T ss_pred             CCCCCEEECCCCCCEEECCCCHHHHHHHHHHHC---HHHHHHH
T ss_conf             357787888789987775888587999999989---9999998


No 6  
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=70.27  E-value=3.4  Score=21.51  Aligned_cols=49  Identities=22%  Similarity=0.194  Sum_probs=36.4

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCHHHHHHHCCCCCCCCCC-CHHHHHH
Q ss_conf             84597436100025---89998674399989999972737988322-9999999
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTPDEYRIKWNLASDYPMV-SREYATT  126 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp~eYR~kwGLp~dyPlv-Ap~Ys~~  126 (149)
                      ..++||-|-+.|.+   +-.|....|+.+-...+.++||-- |--+ =-||.++
T Consensus        14 ~~~~CLFCd~~f~s~~~~l~H~k~~H~FD~~~~~~~~~LDf-Y~~IKLINYIR~   66 (121)
T 1wir_A           14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEF-YGYIKLINFIRL   66 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCH-HHHHHHHHHHHH
T ss_pred             CCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCC-CCEEEEEEEEEE
T ss_conf             01335211883679999999988740999899998728871-046888987761


No 7  
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=69.47  E-value=1.1  Score=24.54  Aligned_cols=16  Identities=31%  Similarity=0.528  Sum_probs=13.3

Q ss_pred             CCCCCEEECCCCHHHH
Q ss_conf             3888459743610002
Q gi|254780783|r   74 IENGCLYCLEDGMQFK   89 (149)
Q Consensus        74 i~~d~iiClecGk~~K   89 (149)
                      +..|+.||+|||+.|.
T Consensus         1 ~~~d~~~C~eC~~~~~   16 (111)
T 1d4u_A            1 MEFDYVICEECGKEFM   16 (111)
T ss_dssp             CCCCCEECTTTCCEES
T ss_pred             CCCCHHHHHHCCCHHH
T ss_conf             9965178988289221


No 8  
>3oio_A Transcriptional regulator (ARAC-type DNA-binding containing proteins); PSI-2, midwest center for structural genomics; 1.65A {Chromobacterium violaceum}
Probab=65.59  E-value=1.9  Score=23.13  Aligned_cols=35  Identities=23%  Similarity=0.276  Sum_probs=26.7

Q ss_pred             EEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHCCCC
Q ss_conf             59743610-002589998674399989999972737
Q gi|254780783|r   79 LYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKWNLA  113 (149)
Q Consensus        79 iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kwGLp  113 (149)
                      -|..+||= ....+.|.....+|+||.+||.+..-|
T Consensus        77 ~IA~~~Gf~~~~~f~r~Fk~~~G~sP~~yR~~~~~p  112 (113)
T 3oio_A           77 QIGLACGFSSGPHFSSTYRNHFNITPREERAQRAQP  112 (113)
T ss_dssp             HHHHHTTCSCHHHHHHHHHHHHSSCHHHHHHTTTCC
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC
T ss_conf             999981999889999999999891999999760699


No 9  
>3oou_A LIN2118 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; HET: BTB; 1.57A {Listeria innocua}
Probab=65.28  E-value=1.7  Score=23.42  Aligned_cols=31  Identities=26%  Similarity=0.421  Sum_probs=23.8

Q ss_pred             EECCCCH-HHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf             9743610-002589998674399989999972
Q gi|254780783|r   80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKW  110 (149)
Q Consensus        80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~kw  110 (149)
                      |+++||= ....+.|-....+|+||.+||.++
T Consensus        76 IA~~~Gf~~~s~F~~~Fk~~~g~tP~~yRk~~  107 (108)
T 3oou_A           76 IAGKSGYTDMAYFYRQFKKHTGETPNRYRKIH  107 (108)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred             HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHC
T ss_conf             99992999889999999998890999999865


No 10 
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.05  E-value=4.6  Score=20.63  Aligned_cols=34  Identities=21%  Similarity=0.348  Sum_probs=22.9

Q ss_pred             CCCHHHHCCC-CCEEECCCCHH-HH---HHHHHHHHHCC
Q ss_conf             8573651388-84597436100-02---58999867439
Q gi|254780783|r   67 AVPIRKSIEN-GCLYCLEDGMQ-FK---SLKRHLKTHHN  100 (149)
Q Consensus        67 Av~i~kSi~~-d~iiClecGk~-~K---~LkRHL~t~hg  100 (149)
                      .....+.+.+ ..++|=+||+. |+   .|++|+...|.
T Consensus        12 ~~~~~~~~~~~~~~~C~~C~k~~~~~~~~L~~H~~~~h~   50 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQK   50 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCEECCCCCEEECCCHHHHHHHHHHHCC
T ss_conf             230567633898989999997305589999999998628


No 11 
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A 1eo0_A
Probab=57.30  E-value=2.3  Score=22.63  Aligned_cols=18  Identities=17%  Similarity=0.300  Sum_probs=7.9

Q ss_pred             CHHHHHHHHHHHHHHHHH
Q ss_conf             889999999999999995
Q gi|254780783|r   31 PMADIGSLITDVHSALQR   48 (149)
Q Consensus        31 ~~~el~~lI~~v~~aL~~   48 (149)
                      +.++|-.+-..+...-..
T Consensus        57 ~~~~v~~~Ak~Li~~WK~   74 (309)
T 1pqv_S           57 TNVEISKLVKKMISSWKD   74 (309)
T ss_pred             CCHHHHHHHHHHHHHHHH
T ss_conf             949999999999999999


No 12 
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=55.64  E-value=3.9  Score=21.10  Aligned_cols=26  Identities=31%  Similarity=0.503  Sum_probs=20.7

Q ss_pred             CEEECC--CCHHHH---HHHHHHHHHCCCCH
Q ss_conf             459743--610002---58999867439998
Q gi|254780783|r   78 CLYCLE--DGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiCle--cGk~~K---~LkRHL~t~hgLtp  103 (149)
                      --+|-+  |||.|+   .|++|.++.||-.|
T Consensus        17 ~~~C~~~~C~k~F~~~~~L~~H~~~h~~~~~   47 (72)
T 2epa_A           17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKP   47 (72)
T ss_dssp             CEECSSTTTCCEESSHHHHHHHHHHHSSSCS
T ss_pred             CEECCCCCCCCEECCHHHHHHHHHHCCCCCC
T ss_conf             9689899999876999999878651069978


No 13 
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=54.72  E-value=12  Score=17.90  Aligned_cols=77  Identities=10%  Similarity=0.081  Sum_probs=41.0

Q ss_pred             HCCCCCHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHH-------H
Q ss_conf             36888889999999---------9999999950266666555785458998573651388845974361000-------2
Q gi|254780783|r   26 SNHVVPMADIGSLI---------TDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQF-------K   89 (149)
Q Consensus        26 s~n~v~~~el~~lI---------~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~-------K   89 (149)
                      ++...+++||-..+         .+||.+|..|....-.-....... ...-.....-...++||..||+-+       .
T Consensus        30 ~~~~~ta~ei~~~l~~~~~~i~~~TVYR~L~~L~~~Glv~~i~~~~~-~~~y~~~~~~~H~hliC~~Cg~v~~i~~~~~~  108 (145)
T 3eyy_A           30 TLEHATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAHLGHG-APTYHLADRHHHIHLVCRDCTNVIEADLSVAA  108 (145)
T ss_dssp             HHSSBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEEEECGGG-CEEEEETTSCCSEEEEESSSSCEEEECGGGGH
T ss_pred             HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCC-CEEECCCCCCCCCEEEECCCCCEEECCCHHHH
T ss_conf             37998999999999975888765899999999998650577652899-35631479988457999999998982635888


Q ss_pred             HHHHHHHHHCCCCH
Q ss_conf             58999867439998
Q gi|254780783|r   90 SLKRHLKTHHNMTP  103 (149)
Q Consensus        90 ~LkRHL~t~hgLtp  103 (149)
                      .+.+++...+|...
T Consensus       109 ~~~~~i~~~~Gf~i  122 (145)
T 3eyy_A          109 DFTAKLREQFGFDT  122 (145)
T ss_dssp             HHHHHHHHHTCEEE
T ss_pred             HHHHHHHHHCCCEE
T ss_conf             99999999719989


No 14 
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=52.91  E-value=5.1  Score=20.36  Aligned_cols=18  Identities=33%  Similarity=0.713  Sum_probs=16.9

Q ss_pred             CCCCHHHHHHHCCCCCCC
Q ss_conf             399989999972737988
Q gi|254780783|r   99 HNMTPDEYRIKWNLASDY  116 (149)
Q Consensus        99 hgLtp~eYR~kwGLp~dy  116 (149)
                      -|.||+|-|+.||++.||
T Consensus       122 ~gKt~eEiR~~f~I~~D~  139 (141)
T 1fs1_B          122 KGKTPEEIRKTFNIKNDF  139 (141)
T ss_dssp             TTCCHHHHHHHTC-----
T ss_pred             CCCCHHHHHHHHCCCCCC
T ss_conf             599999999993999889


No 15 
>3mn2_A Probable ARAC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=51.47  E-value=4.4  Score=20.75  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=23.4

Q ss_pred             EECCCCH-HHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf             9743610-002589998674399989999972
Q gi|254780783|r   80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKW  110 (149)
Q Consensus        80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~kw  110 (149)
                      |+..||= ....+.|.-...+|+||.+||.++
T Consensus        75 Ia~~~Gf~~~s~F~r~Fk~~~G~sP~~~rk~~  106 (108)
T 3mn2_A           75 AALSCGFSNLGHFARDYRDMFGEKPSETLQRA  106 (108)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHSSCHHHHHHHT
T ss_pred             HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             99992899889999999998891999999763


No 16 
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A*
Probab=49.34  E-value=8.3  Score=19.01  Aligned_cols=19  Identities=32%  Similarity=0.704  Sum_probs=17.3

Q ss_pred             CCCCHHHHHHHCCCCCCCC
Q ss_conf             3999899999727379883
Q gi|254780783|r   99 HNMTPDEYRIKWNLASDYP  117 (149)
Q Consensus        99 hgLtp~eYR~kwGLp~dyP  117 (149)
                      -|.||+|-|+.||++.||.
T Consensus       126 kgKt~eeiR~~fgI~~D~T  144 (160)
T 2p1m_A          126 KGKTPEEIRTTFNIKNDFT  144 (160)
T ss_dssp             TTCCHHHHHHHTTCCCCCC
T ss_pred             CCCCHHHHHHHHCCCCCCC
T ss_conf             5999999999929998898


No 17 
>1bl0_A Protein (multiple antibiotic resistance protein), DNA (5'- D(*CP*CP*GP*AP*TP*GP*CP*CP*AP*CP*GP*TP*TP*TP*TP*GP*CP*TP*AP *AP*AP*TP* CP*C)-3')...; transcriptional activator; HET: DNA; 2.30A {Escherichia coli} SCOP: a.4.1.8 a.4.1.8 PDB: 1xs9_A
Probab=47.42  E-value=5.2  Score=20.29  Aligned_cols=34  Identities=21%  Similarity=0.362  Sum_probs=25.3

Q ss_pred             EEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHCCC
Q ss_conf             59743610-00258999867439998999997273
Q gi|254780783|r   79 LYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKWNL  112 (149)
Q Consensus        79 iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kwGL  112 (149)
                      -|+.+||= ..-.+.|.....+|+||.+||..-..
T Consensus        81 ~IA~~~Gf~~~s~F~r~Fk~~~G~tP~~yR~~~~~  115 (129)
T 1bl0_A           81 YLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQ  115 (129)
T ss_dssp             HHHHHTTCSCHHHHHHHHHHHHSSCHHHHHTCSSC
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCC
T ss_conf             99999689987899999999989099999986677


No 18 
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=47.39  E-value=6.9  Score=19.54  Aligned_cols=24  Identities=46%  Similarity=0.497  Sum_probs=13.2

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCC
Q ss_conf             84597436100025---8999867439
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHN  100 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hg  100 (149)
                      ....|-+||+.|++   |.+|....|+
T Consensus        68 ~~~~C~~C~~~F~~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           68 KKLTCLECMRTFKSSFSIWRHQVEVHN   94 (107)
T ss_dssp             GGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             CCCCCCCCCCEECCHHHHHHHHHHHCC
T ss_conf             998789979786997999999998868


No 19 
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, cytoplasm, binding, transcription; HET: PAM; 1.90A {Vibrio cholerae O395}
Probab=47.27  E-value=5.5  Score=20.14  Aligned_cols=31  Identities=19%  Similarity=0.105  Sum_probs=18.7

Q ss_pred             EECCCCHHHHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf             97436100025899986743999899999727
Q gi|254780783|r   80 YCLEDGMQFKSLKRHLKTHHNMTPDEYRIKWN  111 (149)
Q Consensus        80 iClecGk~~K~LkRHL~t~hgLtp~eYR~kwG  111 (149)
                      +|-.+|-.-..|.|.+. ..|+||-+|..++=
T Consensus       191 lA~~~~~S~~~l~r~fK-~~g~s~~~yi~~~R  221 (276)
T 3gbg_A          191 ICGELRTNRMILKKELE-SRGVKFRELINSIR  221 (276)
T ss_dssp             HHHHHTCCHHHHHHHHH-TTTCCHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHH-HHCCCHHHHHHHHH
T ss_conf             99997989999999999-96988999999999


No 20 
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.94  E-value=4.8  Score=20.54  Aligned_cols=27  Identities=30%  Similarity=0.504  Sum_probs=20.3

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      ..--|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 ~~YkC~~CgK~F~~~s~L~~H~riHTGEKP   40 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSCSCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             626889798888885785665566589889


No 21 
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.46  E-value=5.2  Score=20.30  Aligned_cols=23  Identities=17%  Similarity=0.111  Sum_probs=12.5

Q ss_pred             CEEECCCCHHHHH---HHHHHHHHCC
Q ss_conf             4597436100025---8999867439
Q gi|254780783|r   78 CLYCLEDGMQFKS---LKRHLKTHHN  100 (149)
Q Consensus        78 ~iiClecGk~~K~---LkRHL~t~hg  100 (149)
                      --.|-.||+.|.+   |.+|+.+.|.
T Consensus        25 ~~~c~~C~k~F~~~~~L~~H~~~~H~   50 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHV   50 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCCCCCCCCEECCHHHHHHHHHHHCC
T ss_conf             98899879982988999997086556


No 22 
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=46.38  E-value=3.4  Score=21.53  Aligned_cols=55  Identities=15%  Similarity=0.097  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHH-HH
Q ss_conf             999999999995026666655578545899857365138884597436100025899-98
Q gi|254780783|r   37 SLITDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQFKSLKR-HL   95 (149)
Q Consensus        37 ~lI~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~K~LkR-HL   95 (149)
                      .+|.++|..|..=+-  ..++..+.....++..+  +--.+.=.|.+||++|.+++| |+
T Consensus       124 ~~i~~~Y~~Lk~~G~--~FP~~~~~~~~~~~~~~--p~w~~~~~C~~C~~~F~~~~r~~~  179 (220)
T 1dvp_A          124 QAIKDTMTILKAKGH--TFPELREADAMFTADTA--PNWADGRVCHRCRVEFTFTNRKHH  179 (220)
T ss_dssp             CHHHHHHHHHHHTTC--CCCCCCC---CCCCSCC--CCCCCCSBCTTTCCBCCSSSCCEE
T ss_pred             HHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             699999999997676--78978753200002242--225678857678981117653716


No 23 
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.14  E-value=6.9  Score=19.52  Aligned_cols=27  Identities=37%  Similarity=0.554  Sum_probs=20.3

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|.+|.+..-|-.|
T Consensus        11 KPy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2em4_A           11 RPYECIECGKAFKTKSSLICHRRSHTGEKP   40 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             795789888874866787887146389889


No 24 
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=43.80  E-value=5.7  Score=20.06  Aligned_cols=21  Identities=29%  Similarity=0.292  Sum_probs=9.1

Q ss_pred             EEECCCCHHHH---HHHHHHHHHC
Q ss_conf             59743610002---5899986743
Q gi|254780783|r   79 LYCLEDGMQFK---SLKRHLKTHH   99 (149)
Q Consensus        79 iiClecGk~~K---~LkRHL~t~h   99 (149)
                      ..|-+||+.|.   .|.+|+...|
T Consensus        31 ~~C~~C~~~F~~~~~l~~H~~~~H   54 (60)
T 2adr_A           31 YPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             EECTTTCCEESSHHHHHHHHTTTS
T ss_pred             EECCCCCCEECCHHHHHHHCCCCC
T ss_conf             478989899488899997592657


No 25 
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.74  E-value=7.7  Score=19.22  Aligned_cols=28  Identities=29%  Similarity=0.462  Sum_probs=20.3

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~HtgekP   40 (46)
T 2emi_A           10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKP   40 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHGGGCSCCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             9892899999874867886776546189789


No 26 
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=43.51  E-value=18  Score=16.79  Aligned_cols=86  Identities=10%  Similarity=0.145  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHC-C-CCCHHHHHHHHH---------HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCC
Q ss_conf             99999999736-8-888899999999---------999999950266666555785458998573651388845974361
Q gi|254780783|r   17 TVDIVAAYVSN-H-VVPMADIGSLIT---------DVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDG   85 (149)
Q Consensus        17 ta~IV~A~vs~-n-~v~~~el~~lI~---------~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecG   85 (149)
                      =..|.....+. . .++++||-..+.         +||.+|..|.............. .--......-...+++|..||
T Consensus        20 R~~Il~~L~~~~~~h~sa~eI~~~l~~~~~~i~~~TVYR~L~~L~e~gli~~~~~~~~-~~~~~~~~~~hh~HliC~~Cg   98 (136)
T 1mzb_A           20 RVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGG-HAVFELADSGHHDHMVCVDTG   98 (136)
T ss_dssp             HHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEECSSSS-SCEEEESSSCCCEEEEETTTC
T ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCC-EEEEECCCCCCCCEEEECCCC
T ss_conf             9999999985899999999999999976889888999999999996891899993898-189965899988889999999


Q ss_pred             HHH-------HHHHHHHHHHCCCCH
Q ss_conf             000-------258999867439998
Q gi|254780783|r   86 MQF-------KSLKRHLKTHHNMTP  103 (149)
Q Consensus        86 k~~-------K~LkRHL~t~hgLtp  103 (149)
                      +-.       ..+.+.+...+|.+.
T Consensus        99 ~i~~~~~~~~~~~~~~~~~~~gf~i  123 (136)
T 1mzb_A           99 EVIEFMDAEIEKRQKEIVRERGFEL  123 (136)
T ss_dssp             CEEEECCHHHHHHHHHHHHTTTCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHCCCEE
T ss_conf             9998458459999998799769989


No 27 
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.90  E-value=5.9  Score=19.98  Aligned_cols=27  Identities=33%  Similarity=0.529  Sum_probs=18.9

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.+..-|-.|
T Consensus        10 kpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   39 (42)
T 2eos_A           10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGP   39 (42)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHTTTTSCCSS
T ss_pred             CCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             897589889840788999998230389898


No 28 
>2k9s_A Arabinose operon regulatory protein; activator, arabinose catabolism, carbohydrate metabolism, cytoplasm, DNA-binding, repressor, transcription; NMR {Escherichia coli}
Probab=42.53  E-value=6.8  Score=19.56  Aligned_cols=96  Identities=11%  Similarity=0.119  Sum_probs=44.3

Q ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCC-CCHHHHCCCCCEEECCCCH-
Q ss_conf             999999999999736888889999999999999995026----6666555785458998-5736513888459743610-
Q gi|254780783|r   13 FLEMTVDIVAAYVSNHVVPMADIGSLITDVHSALQRVVS----RAPCQDNVQPERLKPA-VPIRKSIENGCLYCLEDGM-   86 (149)
Q Consensus        13 l~~lta~IV~A~vs~n~v~~~el~~lI~~v~~aL~~l~~----~~~~~~~~~~~~~~PA-v~i~kSi~~d~iiClecGk-   86 (149)
                      .+..+.+.+..+.++..++.++|...+.--...|..+=.    -.+.. --..-...-| -.+..+-.+-.=|+++||= 
T Consensus         4 ri~~~~~~i~~~~~~~~~~l~~lA~~~~~s~~~l~r~fk~~~g~s~~~-~i~~~Rl~~a~~lL~~~~~si~~IA~~~Gf~   82 (107)
T 2k9s_A            4 RVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLS-WREDQRISQAKLLLSTTRMPIATVGRNVGFD   82 (107)
T ss_dssp             HHHHHHHHHHHTSSCSSCCHHHHHHHTTSCHHHHHHHHHHHHSSCHHH-HHHHHHHHHHHHHHHHCCCCHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
T ss_conf             999999999975679997999999998929999999999998919899-9988899989898866683185799984999


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             00258999867439998999997
Q gi|254780783|r   87 QFKSLKRHLKTHHNMTPDEYRIK  109 (149)
Q Consensus        87 ~~K~LkRHL~t~hgLtp~eYR~k  109 (149)
                      ..-.+.|.....+|+||.+||..
T Consensus        83 ~~~~f~r~Fk~~~G~tP~~yR~~  105 (107)
T 2k9s_A           83 DQLYFSRVFKKCTGASPSEFRAG  105 (107)
T ss_dssp             CHHHHHHHHHHHHSSCHHHHHHT
T ss_pred             CHHHHHHHHHHHHCCCHHHHHHC
T ss_conf             88999999999889099999704


No 29 
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle/ligase/protein turnover complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=42.39  E-value=12  Score=17.91  Aligned_cols=19  Identities=32%  Similarity=0.677  Sum_probs=17.4

Q ss_pred             CCCCHHHHHHHCCCCCCCC
Q ss_conf             3999899999727379883
Q gi|254780783|r   99 HNMTPDEYRIKWNLASDYP  117 (149)
Q Consensus        99 hgLtp~eYR~kwGLp~dyP  117 (149)
                      -|.||+|-|..||++.|+.
T Consensus       127 ~gks~eeir~~f~i~~d~t  145 (159)
T 2ast_A          127 KGKTPEEIRKTFNIKNDFT  145 (159)
T ss_dssp             SSCCHHHHHHHTTCCCCSC
T ss_pred             CCCCHHHHHHHHCCCCCCC
T ss_conf             4999999999829899999


No 30 
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=40.36  E-value=9.5  Score=18.62  Aligned_cols=25  Identities=28%  Similarity=0.463  Sum_probs=18.6

Q ss_pred             CCCEEEC--CCCHHHH---HHHHHHHHHCC
Q ss_conf             8845974--3610002---58999867439
Q gi|254780783|r   76 NGCLYCL--EDGMQFK---SLKRHLKTHHN  100 (149)
Q Consensus        76 ~d~iiCl--ecGk~~K---~LkRHL~t~hg  100 (149)
                      ++-..|-  +||+.|.   .|++|+++.||
T Consensus       126 ~~p~~C~c~~C~k~F~~~~~L~~H~~~hHG  155 (155)
T 2gli_A          126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCEECCCCCCCCEECCHHHHHHHCCCCCC
T ss_conf             888377689989980988999961815749


No 31 
>3mks_A Suppressor of kinetochore protein 1; ubiquitin ligase, protein binding, small molecule complex, ligase/cell cycle; HET: C1C; 2.60A {Saccharomyces cerevisiae} PDB: 1nex_A*
Probab=40.36  E-value=13  Score=17.82  Aligned_cols=19  Identities=26%  Similarity=0.658  Sum_probs=17.4

Q ss_pred             CCCCHHHHHHHCCCCCCCC
Q ss_conf             3999899999727379883
Q gi|254780783|r   99 HNMTPDEYRIKWNLASDYP  117 (149)
Q Consensus        99 hgLtp~eYR~kwGLp~dyP  117 (149)
                      -|.||+|-|+.||++.||.
T Consensus       134 kgkt~eeiR~~f~i~~d~t  152 (169)
T 3mks_A          134 RGRSPEEIRRTFNIVNDFT  152 (169)
T ss_dssp             TTCCHHHHHHHHTCCCCCC
T ss_pred             CCCCHHHHHHHHCCCCCCC
T ss_conf             4999999999929999999


No 32 
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=39.74  E-value=9.4  Score=18.66  Aligned_cols=28  Identities=21%  Similarity=0.286  Sum_probs=20.4

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|=+|||.|.   .|++|.++.-|-.|
T Consensus        10 eKpy~C~~Cgk~F~~~s~L~~H~riHtgEKP   40 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             9797899989985888899998120489689


No 33 
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.05  E-value=9.5  Score=18.65  Aligned_cols=26  Identities=27%  Similarity=0.447  Sum_probs=18.8

Q ss_pred             CEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             4597436100025---8999867439998
Q gi|254780783|r   78 CLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      --.|-+|||.|..   |.+|+++.-|-.|
T Consensus        12 py~C~~CgK~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2ep1_A           12 PYECSDCGKSFIKKSQLHVHQRIHTGENP   40 (46)
T ss_dssp             SSCCSSSCCCCSSHHHHHHHHGGGSSSCC
T ss_pred             CEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             96899999962878999998024289999


No 34 
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.79  E-value=12  Score=17.91  Aligned_cols=27  Identities=30%  Similarity=0.482  Sum_probs=19.3

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2eoe_A           11 KPYKCNECGKVFTQNSHLANHQRIHTGVKP   40 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHGGGSCCCS
T ss_pred             CCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             793889999996888999998200088979


No 35 
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=37.52  E-value=10  Score=18.42  Aligned_cols=27  Identities=30%  Similarity=0.531  Sum_probs=19.7

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.+..-|-.|
T Consensus        11 kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2em9_A           11 KPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             896789879970888999998012088989


No 36 
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.97  E-value=13  Score=17.80  Aligned_cols=28  Identities=32%  Similarity=0.465  Sum_probs=20.5

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 EKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   40 (46)
T 2en6_A           10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKP   40 (46)
T ss_dssp             SCCEEETTTTEEESSHHHHHHHHHHHSSCCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             9897998989977788999998301289889


No 37 
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=36.67  E-value=13  Score=17.82  Aligned_cols=22  Identities=23%  Similarity=0.295  Sum_probs=10.4

Q ss_pred             EEECCCCHHHH---HHHHHHHHHCC
Q ss_conf             59743610002---58999867439
Q gi|254780783|r   79 LYCLEDGMQFK---SLKRHLKTHHN  100 (149)
Q Consensus        79 iiClecGk~~K---~LkRHL~t~hg  100 (149)
                      -.|-+|||.|.   .|++|+++.|.
T Consensus        41 ~~C~~C~k~F~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           41 YPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             EECCCCCCEECCHHHHHHHHHCCCC
T ss_conf             0898989980898899886260389


No 38 
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.01  E-value=10  Score=18.47  Aligned_cols=27  Identities=33%  Similarity=0.460  Sum_probs=20.0

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|+++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKP   40 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             996899989856778999998034289889


No 39 
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.76  E-value=9.1  Score=18.75  Aligned_cols=21  Identities=38%  Similarity=0.431  Sum_probs=15.2

Q ss_pred             CCCEEECCCCHHHHH---HHHHHH
Q ss_conf             884597436100025---899986
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLK   96 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~   96 (149)
                      ...-.|=.|||+||+   ||-|-+
T Consensus         7 ~k~hlcdlcgkkfksk~tlkshkl   30 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKL   30 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCEEEEEEEE
T ss_conf             762158766034404413130010


No 40 
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.69  E-value=12  Score=17.88  Aligned_cols=28  Identities=25%  Similarity=0.249  Sum_probs=19.7

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.++.-|-.|
T Consensus         8 eKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   38 (44)
T 2emx_A            8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP   38 (44)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHHTSSCS
T ss_pred             CCCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             9897899989873877899998152288989


No 41 
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.60  E-value=11  Score=18.16  Aligned_cols=22  Identities=23%  Similarity=0.383  Sum_probs=15.2

Q ss_pred             EEECCCCHHHHH---HHHHHHHHCC
Q ss_conf             597436100025---8999867439
Q gi|254780783|r   79 LYCLEDGMQFKS---LKRHLKTHHN  100 (149)
Q Consensus        79 iiClecGk~~K~---LkRHL~t~hg  100 (149)
                      ..|-+||+.|+.   |++|+...|.
T Consensus        39 ~~C~~C~~~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A           39 FPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHTST
T ss_pred             EECCCCCCEECCHHHHHHHHHHHCC
T ss_conf             4639979940799999999998793


No 42 
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.40  E-value=11  Score=18.11  Aligned_cols=27  Identities=26%  Similarity=0.359  Sum_probs=19.9

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|=+|||.|.   .|++|.++.-|..|
T Consensus        11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2ep2_A           11 KPYECSICGKSFTKKSQLHVHQQIHTGEKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTTSSCCS
T ss_pred             CCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             696789879970877899987233089899


No 43 
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=35.30  E-value=10  Score=18.36  Aligned_cols=22  Identities=36%  Similarity=0.599  Sum_probs=16.4

Q ss_pred             EEECCCCHHHHH---HHHHHHHHCC
Q ss_conf             597436100025---8999867439
Q gi|254780783|r   79 LYCLEDGMQFKS---LKRHLKTHHN  100 (149)
Q Consensus        79 iiClecGk~~K~---LkRHL~t~hg  100 (149)
                      -.|=+|||.|..   |+||.++.-|
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCHHHHCCCCCCCCC
T ss_conf             3688987998770582211165026


No 44 
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.97  E-value=13  Score=17.69  Aligned_cols=27  Identities=22%  Similarity=0.341  Sum_probs=19.9

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+||+.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~C~k~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2yto_A           11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERH   40 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTCCCB
T ss_pred             CCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             895889998970875899988167188888


No 45 
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.76  E-value=11  Score=18.27  Aligned_cols=27  Identities=26%  Similarity=0.300  Sum_probs=19.1

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCC
Q ss_conf             884597436100025---899986743999
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMT  102 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLt  102 (149)
                      +.--.|-+|||.|..   |++|.++.-|-+
T Consensus        10 Ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE~   39 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQKTHAAKS   39 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHGGGGCCCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf             869678999895587799999803268989


No 46 
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=34.70  E-value=9.5  Score=18.63  Aligned_cols=28  Identities=14%  Similarity=-0.007  Sum_probs=19.9

Q ss_pred             CCCCEEECCCCHHHHH---HHHHHHHHCCCC
Q ss_conf             8884597436100025---899986743999
Q gi|254780783|r   75 ENGCLYCLEDGMQFKS---LKRHLKTHHNMT  102 (149)
Q Consensus        75 ~~d~iiClecGk~~K~---LkRHL~t~hgLt  102 (149)
                      .+....|=+|||.|..   |++|++..|+-.
T Consensus        22 ~~~~~~C~~C~k~F~~~~~L~~H~~~hH~~~   52 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGG   52 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCC
T ss_pred             CCCCCCCCCCCCHHCCHHHHHHHHHHHCCCC
T ss_conf             9989788666741199999999724444899


No 47 
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=34.57  E-value=19  Score=16.66  Aligned_cols=26  Identities=35%  Similarity=0.529  Sum_probs=18.3

Q ss_pred             EEEC--CCCHHHH---HHHHHHHHHCCCCHH
Q ss_conf             5974--3610002---589998674399989
Q gi|254780783|r   79 LYCL--EDGMQFK---SLKRHLKTHHNMTPD  104 (149)
Q Consensus        79 iiCl--ecGk~~K---~LkRHL~t~hgLtp~  104 (149)
                      -+|=  .|||.|.   .|++|++..++-.|-
T Consensus        16 ~~C~~p~C~k~F~~~~~L~~H~r~H~~~~~~   46 (100)
T 2ebt_A           16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPY   46 (100)
T ss_dssp             EECCSSSCCCEESCHHHHHHHHHHHSCCCCE
T ss_pred             EECCCCCCCCEECCHHHHHHHHHHHCCCCCC
T ss_conf             7898999989869999999998860899881


No 48 
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.43  E-value=8.7  Score=18.87  Aligned_cols=28  Identities=39%  Similarity=0.702  Sum_probs=19.9

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|=+|||.|.   .|++|.++.-|-.|
T Consensus        10 ekpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDP   40 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHHHHSCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             9896899999988768899998015499588


No 49 
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=34.30  E-value=11  Score=18.16  Aligned_cols=17  Identities=18%  Similarity=0.341  Sum_probs=6.9

Q ss_pred             ECCCCHHHHHHHHHHHH
Q ss_conf             74361000258999867
Q gi|254780783|r   81 CLEDGMQFKSLKRHLKT   97 (149)
Q Consensus        81 ClecGk~~K~LkRHL~t   97 (149)
                      |-.||+.|..|++|++.
T Consensus        67 C~~~~k~~~~l~~H~~~   83 (85)
T 2j7j_A           67 CSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             CCCEESSHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHH
T ss_conf             89878619999999874


No 50 
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.25  E-value=14  Score=17.59  Aligned_cols=21  Identities=24%  Similarity=0.453  Sum_probs=9.8

Q ss_pred             EEECCCCHHHH---HHHHHHHHHC
Q ss_conf             59743610002---5899986743
Q gi|254780783|r   79 LYCLEDGMQFK---SLKRHLKTHH   99 (149)
Q Consensus        79 iiClecGk~~K---~LkRHL~t~h   99 (149)
                      -.|-.||+.|.   .|++|+...|
T Consensus        16 y~C~~C~~~f~~~~~l~~H~~~~h   39 (77)
T 2ct1_A           16 YECYICHARFTQSGTMKMHILQKH   39 (77)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCHHHHHHEEEEEE
T ss_conf             089799970140575432166430


No 51 
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.20  E-value=15  Score=17.37  Aligned_cols=27  Identities=26%  Similarity=0.369  Sum_probs=19.2

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCC
Q ss_conf             884597436100025---899986743999
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMT  102 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLt  102 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.
T Consensus        10 eKpy~C~~CgK~F~~~s~L~~H~~~HtgeK   39 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEK   39 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCC
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf             968288989977487689899833138998


No 52 
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.18  E-value=16  Score=17.18  Aligned_cols=28  Identities=21%  Similarity=0.438  Sum_probs=19.9

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +..-.|-+|||.|.   .|++|.++.-|-.|
T Consensus         8 eKpy~C~~Cgk~F~~~s~L~~H~r~HtG~k~   38 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG   38 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             9796899899806678999998053798989


No 53 
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.84  E-value=12  Score=17.90  Aligned_cols=27  Identities=30%  Similarity=0.257  Sum_probs=19.0

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|.+|.+..-|-.|
T Consensus        11 kpy~C~~CgK~F~~~s~L~~H~riHtgeKP   40 (46)
T 2yso_A           11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKN   40 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHSCCSC
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             882889998977745878998327499888


No 54 
>3lsg_A Two-component response regulator YESN; structural genomics, PSI-2, protein structure initiative, MCSG; 2.05A {Fusobacterium nucleatum}
Probab=33.82  E-value=8.3  Score=19.01  Aligned_cols=29  Identities=21%  Similarity=0.351  Sum_probs=21.4

Q ss_pred             EECCCCH-HHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             9743610-0025899986743999899999
Q gi|254780783|r   80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRI  108 (149)
Q Consensus        80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~  108 (149)
                      |+.+||= ..-.+.|......|+||.+||+
T Consensus        74 IA~~~Gf~~~~~f~r~Fk~~~G~sP~~yRk  103 (103)
T 3lsg_A           74 IAEQVGFEDVNYFITKFKKYYQITPKQYRE  103 (103)
T ss_dssp             HHHHTTCSCHHHHHHHHHHHHSSCHHHHTC
T ss_pred             HHHHHHCCCHHHHHHHHHHHHCCCHHHHCC
T ss_conf             999985799899999999998909999809


No 55 
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.47  E-value=11  Score=18.13  Aligned_cols=28  Identities=25%  Similarity=0.331  Sum_probs=19.9

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        10 ekpy~C~~C~K~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2enh_A           10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKP   40 (46)
T ss_dssp             SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             8895889869970867897886455289879


No 56 
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=33.34  E-value=14  Score=17.47  Aligned_cols=26  Identities=35%  Similarity=0.558  Sum_probs=19.6

Q ss_pred             CEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             459743610002---58999867439998
Q gi|254780783|r   78 CLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      --.|-+|||.|.   .|++|++..-|-.|
T Consensus        12 py~C~~Cgk~F~~~~~L~~H~riHtgeKP   40 (46)
T 2ely_A           12 PFKCVECGKGFSRRSALNVHHKLHTGEKP   40 (46)
T ss_dssp             SBCCSSSCCCBSSTTHHHHHHHHHSCCSS
T ss_pred             CEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             92889999953778999998014189889


No 57 
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.27  E-value=13  Score=17.75  Aligned_cols=27  Identities=30%  Similarity=0.300  Sum_probs=19.1

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2epw_A           11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKH   40 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHHCCSCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             694899999683876999998135599888


No 58 
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=33.18  E-value=12  Score=17.90  Aligned_cols=12  Identities=17%  Similarity=0.232  Sum_probs=9.9

Q ss_pred             HHHHHHCCCCCC
Q ss_conf             999997273798
Q gi|254780783|r  104 DEYRIKWNLASD  115 (149)
Q Consensus       104 ~eYR~kwGLp~d  115 (149)
                      .+|++|||+|-=
T Consensus       105 ~~Y~~kFGfpFI  116 (165)
T 2o8i_A          105 SAYTEKFGFPFI  116 (165)
T ss_dssp             HHHHHHHSSCCC
T ss_pred             HHHHHHCCCEEE
T ss_conf             999997599059


No 59 
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.02  E-value=14  Score=17.54  Aligned_cols=28  Identities=29%  Similarity=0.312  Sum_probs=20.4

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtGe~p   40 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             9896789989881877787876566388598


No 60 
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=32.54  E-value=13  Score=17.67  Aligned_cols=27  Identities=22%  Similarity=0.354  Sum_probs=19.1

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |.+|.++.-|-.|
T Consensus        10 KPy~C~~CgK~F~~~~~L~~H~r~HtgEKP   39 (42)
T 2epc_A           10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGP   39 (42)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTTCCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             898889999846767898898005389888


No 61 
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=32.50  E-value=14  Score=17.54  Aligned_cols=27  Identities=30%  Similarity=0.394  Sum_probs=19.4

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.++.-|-.|
T Consensus         9 kpy~C~~Cgk~F~~~s~L~~H~r~HTgE~~   38 (42)
T 2el5_A            9 NPYECSECGKAFNRKDQLISHQRTHAGESG   38 (42)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCCCCS
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             798799879980775899987423389989


No 62 
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.50  E-value=11  Score=18.21  Aligned_cols=28  Identities=32%  Similarity=0.397  Sum_probs=19.4

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 Ekpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   40 (46)
T 2eoo_A           10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKS   40 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHSTTS
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             9797899889985878899998137599798


No 63 
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.37  E-value=16  Score=17.18  Aligned_cols=28  Identities=32%  Similarity=0.574  Sum_probs=20.2

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        10 EKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2em2_A           10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCS
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             9897999989963877999998140399888


No 64 
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.35  E-value=12  Score=18.05  Aligned_cols=25  Identities=24%  Similarity=0.308  Sum_probs=18.2

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCC
Q ss_conf             8459743610002---589998674399
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNM  101 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgL  101 (149)
                      .--.|-+|||.|.   .|++|.++.-|-
T Consensus        11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgE   38 (44)
T 2yu5_A           11 NPFKCSKCDRVFTQRNYLVQHERTHARK   38 (44)
T ss_dssp             CSEECSSSSCEESSSHHHHHHHHHCCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf             6946899899608668999973045898


No 65 
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=32.34  E-value=13  Score=17.76  Aligned_cols=11  Identities=18%  Similarity=0.253  Sum_probs=9.3

Q ss_pred             HHHHHHCCCCC
Q ss_conf             99999727379
Q gi|254780783|r  104 DEYRIKWNLAS  114 (149)
Q Consensus       104 ~eYR~kwGLp~  114 (149)
                      .+|++|||+|-
T Consensus       121 ~~Y~ekFGfpF  131 (181)
T 2q37_A          121 VLYKKKFGFIF  131 (181)
T ss_dssp             HHHHHHHSSCC
T ss_pred             HHHHHHCCCEE
T ss_conf             99999769936


No 66 
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.12  E-value=12  Score=17.92  Aligned_cols=28  Identities=25%  Similarity=0.551  Sum_probs=19.0

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|.+|.+..-|-.|
T Consensus        10 EKpy~C~~Cgk~F~~~s~l~~H~r~HtgeKP   40 (46)
T 2epz_A           10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP   40 (46)
T ss_dssp             CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             9696899989970878999998004289889


No 67 
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.10  E-value=12  Score=18.01  Aligned_cols=26  Identities=31%  Similarity=0.476  Sum_probs=18.6

Q ss_pred             CEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             459743610002---58999867439998
Q gi|254780783|r   78 CLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      --.|-+|||.|.   .|++|.+..-|-.|
T Consensus        12 py~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2eq1_A           12 PYKCNECGKAFRAHSNLTTHQVIHTGEKP   40 (46)
T ss_dssp             CCCCTTTTCCCSSHHHHHHHHTTTCCSCC
T ss_pred             CEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             95789889992888899998212189889


No 68 
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=31.89  E-value=13  Score=17.68  Aligned_cols=28  Identities=32%  Similarity=0.470  Sum_probs=19.5

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |.+|.++.-|-.|
T Consensus        10 EKpy~C~~CgK~F~~~~~L~~H~r~HtgekP   40 (46)
T 2ema_A           10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKP   40 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHTGGGCCCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             9894899989862878899987024389889


No 69 
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.80  E-value=9.2  Score=18.72  Aligned_cols=27  Identities=26%  Similarity=0.480  Sum_probs=19.4

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|.+|.+..-|-.|
T Consensus        11 kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKP   40 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTGGGGSSCCS
T ss_pred             CCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             796899999861878899998101289989


No 70 
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.80  E-value=13  Score=17.80  Aligned_cols=26  Identities=31%  Similarity=0.592  Sum_probs=18.5

Q ss_pred             CEEECC--CCHHHH---HHHHHHHHHCCCCH
Q ss_conf             459743--610002---58999867439998
Q gi|254780783|r   78 CLYCLE--DGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiCle--cGk~~K---~LkRHL~t~hgLtp  103 (149)
                      --.|=+  |||.|.   .|++|.++..|..|
T Consensus        12 P~~C~~~~C~k~F~~~~~L~~H~r~Htgekp   42 (48)
T 2ent_A           12 PFACTWPGCGWRFSRSDELSRHRRSHSGVKP   42 (48)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHTTSCCCCS
T ss_pred             CEECCCCCCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             9589888989970878888877104388979


No 71 
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=31.76  E-value=15  Score=17.28  Aligned_cols=27  Identities=30%  Similarity=0.464  Sum_probs=19.0

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.+..-|-.|
T Consensus        11 kpy~C~~CgK~F~~~s~L~~H~riHtgekP   40 (46)
T 2emk_A           11 KPYECKECGKAFSQTTHLIQHQRVHTGEKP   40 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHHHHSSCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             794899989998788999998111389989


No 72 
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.55  E-value=13  Score=17.78  Aligned_cols=27  Identities=33%  Similarity=0.471  Sum_probs=18.9

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2emg_A           11 NPFICSECGKVFTHKTNLIIHQKIHTGERP   40 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTSCCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             893899998973877888987104499889


No 73 
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.48  E-value=9.5  Score=18.62  Aligned_cols=27  Identities=33%  Similarity=0.485  Sum_probs=19.0

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWITHTREKP   40 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTHHHHCCC
T ss_pred             CCEECCCCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             796889879886875999998203188889


No 74 
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.42  E-value=16  Score=17.18  Aligned_cols=28  Identities=32%  Similarity=0.464  Sum_probs=19.6

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2eow_A           10 EKPYKCNECGKAFRARSSLAIHQATHSGEKP   40 (46)
T ss_dssp             CCCEECTTSCCEESSHHHHHHHHHHHCCCSC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             9696789989961887999998022389889


No 75 
>2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A*
Probab=31.26  E-value=14  Score=17.57  Aligned_cols=12  Identities=17%  Similarity=0.423  Sum_probs=9.8

Q ss_pred             HHHHHHCCCCCC
Q ss_conf             999997273798
Q gi|254780783|r  104 DEYRIKWNLASD  115 (149)
Q Consensus       104 ~eYR~kwGLp~d  115 (149)
                      .+|++|||+|-=
T Consensus       109 ~~Y~~kFGfpFI  120 (174)
T 2o70_A          109 SEYKERFGFPFV  120 (174)
T ss_dssp             HHHHHHHSSCCC
T ss_pred             HHHHHHCCCEEE
T ss_conf             999997599069


No 76 
>2k5e_A Uncharacterized protein; helix protein, structural genomic, structural genomics, PSI-2, protein structure initiative; NMR {Methanococcus jannaschii}
Probab=31.19  E-value=29  Score=15.55  Aligned_cols=34  Identities=18%  Similarity=0.132  Sum_probs=25.8

Q ss_pred             CCCEEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf             88459743610-002589998674399989999972
Q gi|254780783|r   76 NGCLYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKW  110 (149)
Q Consensus        76 ~d~iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kw  110 (149)
                      .-.|-|+.||- .|-+|.---. .||+++++.-+.-
T Consensus        27 ~~gi~C~~C~~~~~etleeaa~-~hgiD~d~Ll~eL   61 (73)
T 2k5e_A           27 SYNLGCIGCMGAQNESLEQGAN-AHGLNVEDILRDL   61 (73)
T ss_dssp             HTTGGGGGTTTGGGSBHHHHHH-HTTCCHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCHHHHHH-HHCCCHHHHHHHH
T ss_conf             8599986789987567999999-9497999999999


No 77 
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.07  E-value=12  Score=18.05  Aligned_cols=27  Identities=26%  Similarity=0.426  Sum_probs=18.8

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|+++.-|-.|
T Consensus        10 KPy~C~~Cgk~F~~~~~L~~H~r~HtgekP   39 (42)
T 2en2_A           10 KPYKCETCGARFVQVAHLRAHVLIHTGSGP   39 (42)
T ss_dssp             CSEECTTTCCEESSHHHHHHHTHHHHSCCS
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             897889869983888899998033089888


No 78 
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=30.63  E-value=14  Score=17.46  Aligned_cols=20  Identities=5%  Similarity=0.147  Sum_probs=13.0

Q ss_pred             HHHHHHCCCCCCCCCCCHHHHH
Q ss_conf             9999972737988322999999
Q gi|254780783|r  104 DEYRIKWNLASDYPMVSREYAT  125 (149)
Q Consensus       104 ~eYR~kwGLp~dyPlvAp~Ys~  125 (149)
                      .+|++|||+|-  =+.+.+.++
T Consensus       130 ~~Y~ekFGfpF--Ii~v~G~s~  149 (189)
T 3o7i_A          130 ARYEARFGRVF--LIRAKGRSG  149 (189)
T ss_dssp             HHHHHHHSSCC--CCCCTTCCH
T ss_pred             HHHHHHCCCEE--EEEECCCCH
T ss_conf             99999769816--987489899


No 79 
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.29  E-value=14  Score=17.49  Aligned_cols=28  Identities=25%  Similarity=0.319  Sum_probs=19.8

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        10 ekpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   40 (46)
T 2en8_A           10 EKSHTCDECGKNFCYISALRIHQRVHMGEKC   40 (46)
T ss_dssp             CSSEECTTTCCEESSHHHHHHHHTTTCCSCS
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             9892899889787878999998334599899


No 80 
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.17  E-value=13  Score=17.79  Aligned_cols=28  Identities=29%  Similarity=0.489  Sum_probs=19.5

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.+..-|-.|
T Consensus         8 ekpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   38 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGP   38 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSC
T ss_pred             CCCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             9798689869864867899998123088889


No 81 
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.10  E-value=12  Score=17.90  Aligned_cols=28  Identities=29%  Similarity=0.596  Sum_probs=20.0

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|+++.-|-.|
T Consensus        10 eKPy~C~~C~K~F~~~s~L~~H~r~HTgeKP   40 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP   40 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             8893899888730577898887334188989


No 82 
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.06  E-value=17  Score=16.94  Aligned_cols=25  Identities=28%  Similarity=0.339  Sum_probs=18.1

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCC
Q ss_conf             88459743610002---58999867439
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHN  100 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hg  100 (149)
                      +.--.|-+|||.|.   .|++|.++.-|
T Consensus        10 eKpy~C~~Cgk~F~~~~~L~~H~r~HtG   37 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLMVHQRTHTG   37 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHTTT
T ss_pred             CCCEECCCCCCEECCHHHHHHHCCCCCC
T ss_conf             9794789869982877887887065688


No 83 
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.95  E-value=17  Score=17.08  Aligned_cols=26  Identities=31%  Similarity=0.443  Sum_probs=19.0

Q ss_pred             CEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             459743610002---58999867439998
Q gi|254780783|r   78 CLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      --.|-+|||.|.   .|.+|.++.-|-.|
T Consensus        12 py~C~~Cgk~F~~~s~L~~H~r~HtgEKP   40 (46)
T 2en9_A           12 LFKCNECKKTFTQSSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHTSSCC
T ss_pred             CEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             95889839981887999987227499789


No 84 
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.87  E-value=17  Score=16.94  Aligned_cols=28  Identities=29%  Similarity=0.401  Sum_probs=19.5

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.+..-|-.|
T Consensus        10 EKpy~C~~CgK~F~~~~~L~~H~r~HtgekP   40 (46)
T 2eme_A           10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGCCCSC
T ss_pred             CCCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             8897899999860889999998003289879


No 85 
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.48  E-value=15  Score=17.44  Aligned_cols=27  Identities=26%  Similarity=0.320  Sum_probs=19.0

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-||||.|.   .|++|.+..-|-.|
T Consensus        11 kpy~C~~C~k~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSSSCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             792898979986877899998004289989


No 86 
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.43  E-value=15  Score=17.32  Aligned_cols=25  Identities=24%  Similarity=0.340  Sum_probs=16.8

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCC
Q ss_conf             8459743610002---589998674399
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNM  101 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgL  101 (149)
                      .-..|-+||+.|.   .|++|+++.||-
T Consensus        36 kpy~C~~C~~~f~~~~~L~~H~~~hh~e   63 (70)
T 1x5w_A           36 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCEECCCCCCEECCHHHHHHHHHHCCCC
T ss_conf             7827897788748888999998662688


No 87 
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.42  E-value=16  Score=17.12  Aligned_cols=28  Identities=21%  Similarity=0.278  Sum_probs=19.3

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.+..-|-.|
T Consensus        10 ekp~~C~~Cgk~F~~~~~L~~H~r~Htgekp   40 (46)
T 2eoh_A           10 KKPYECKECRKTFIQIGHLNQHKRVHTGERS   40 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             8882899899787854765888423389979


No 88 
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.35  E-value=16  Score=17.21  Aligned_cols=21  Identities=33%  Similarity=0.589  Sum_probs=16.6

Q ss_pred             EEECCCCHHHH---HHHHHHHHHC
Q ss_conf             59743610002---5899986743
Q gi|254780783|r   79 LYCLEDGMQFK---SLKRHLKTHH   99 (149)
Q Consensus        79 iiClecGk~~K---~LkRHL~t~h   99 (149)
                      -+|-+|||.|.   .|++|++..|
T Consensus        13 y~C~~Cgk~F~~~~~L~~H~~~~H   36 (54)
T 2eps_A           13 YICQSCGKGFSRPDHLNGHIKQVH   36 (54)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCCCCCCCHHHCCCCCCCCC
T ss_conf             668898998687446257465343


No 89 
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.90  E-value=25  Score=15.98  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=15.9

Q ss_pred             CEEECCCCHHHH---HHHHHHHHHCCCC
Q ss_conf             459743610002---5899986743999
Q gi|254780783|r   78 CLYCLEDGMQFK---SLKRHLKTHHNMT  102 (149)
Q Consensus        78 ~iiClecGk~~K---~LkRHL~t~hgLt  102 (149)
                      ...|-+||+.|.   .|++|+++.+|-.
T Consensus        47 ~~~C~~C~k~F~~~~~L~~H~~~H~g~k   74 (86)
T 1x6h_A           47 AFVCSKCGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             CCCCCCCCCEECCHHHHHHHHHHCCCCC
T ss_conf             8716887966267999999998638998


No 90 
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.87  E-value=17  Score=17.02  Aligned_cols=28  Identities=32%  Similarity=0.498  Sum_probs=19.3

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |.+|.+..-|-.|
T Consensus        10 Ekpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2ytj_A           10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             9797899879962868999998210389889


No 91 
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.76  E-value=15  Score=17.40  Aligned_cols=27  Identities=30%  Similarity=0.362  Sum_probs=18.8

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |.+|.++.-|-.|
T Consensus        11 Kpy~C~~CgK~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQRIHTGENP   40 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTTTSCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             791889998998756887687203499878


No 92 
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=28.42  E-value=21  Score=16.46  Aligned_cols=21  Identities=24%  Similarity=0.295  Sum_probs=15.7

Q ss_pred             CCEEECCCCHHHH---HHHHHHHH
Q ss_conf             8459743610002---58999867
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKT   97 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t   97 (149)
                      .--.|-+|||.|.   .|++|.++
T Consensus        10 kPy~C~~Cgk~F~~~~~L~~H~r~   33 (37)
T 1p7a_A           10 KPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             SSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCEECCCCCCEECCHHHHHHHHHH
T ss_conf             894789999991778888999862


No 93 
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.35  E-value=19  Score=16.75  Aligned_cols=28  Identities=29%  Similarity=0.454  Sum_probs=20.0

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|+.   |++|.++.-|-.|
T Consensus        10 EKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   40 (46)
T 2ytk_A           10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP   40 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             9897999999975888999998211289888


No 94 
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.30  E-value=16  Score=17.11  Aligned_cols=27  Identities=33%  Similarity=0.530  Sum_probs=18.8

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~~~L~~H~~~HtgeKP   40 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             694899999975888999998211289889


No 95 
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.89  E-value=17  Score=17.08  Aligned_cols=28  Identities=29%  Similarity=0.348  Sum_probs=20.2

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |.+|.+..-|-.|
T Consensus        10 eKpy~C~~CgK~F~~~s~L~~H~~iHtgekP   40 (46)
T 2em7_A           10 EKPYKCEECGKGFICRRDLYTHHMVHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHGGGGTTCCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             8897889989861867889987245589789


No 96 
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.68  E-value=17  Score=17.05  Aligned_cols=27  Identities=26%  Similarity=0.383  Sum_probs=19.5

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2eq3_A           11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKP   40 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHTTSCCCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             793789999986867889998113288879


No 97 
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.46  E-value=17  Score=17.00  Aligned_cols=27  Identities=33%  Similarity=0.479  Sum_probs=19.4

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|=+|||.|.   .|++|.+..-|-.|
T Consensus        11 Kpy~C~~CgK~F~~~~~L~~H~r~HtgekP   40 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLIHTGEKP   40 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCEECCCCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             696899999871878999998310189989


No 98 
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.31  E-value=19  Score=16.76  Aligned_cols=28  Identities=29%  Similarity=0.462  Sum_probs=19.9

Q ss_pred             CCCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             88459743610002---58999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        10 EKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   40 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP   40 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHSCCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             9795899989863865999998001298978


No 99 
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, metal transport, zinc, iron, repressor, cytoplasm, DNA-binding; 2.60A {Vibrio cholerae}
Probab=27.21  E-value=34  Score=15.11  Aligned_cols=86  Identities=9%  Similarity=0.133  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHH--CCCCCHHHHHHHHH---------HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCC
Q ss_conf             99999999973--68888899999999---------99999995026666655578545899857365138884597436
Q gi|254780783|r   16 MTVDIVAAYVS--NHVVPMADIGSLIT---------DVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLED   84 (149)
Q Consensus        16 lta~IV~A~vs--~n~v~~~el~~lI~---------~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClec   84 (149)
                      .=..|+.....  +..++++||-..+.         +||.+|..|....-.-......... --.....-...+++|-.|
T Consensus        18 qR~~Il~~l~~~~~~h~sa~el~~~l~~~~~~i~~aTVYR~L~~l~~~gii~~i~~~~~~~-~~~~~~~~~h~hliC~~C   96 (150)
T 2w57_A           18 PRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKS-VFELSTQHHHDHLVCLDC   96 (150)
T ss_dssp             HHHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEEEEECGGGCE-EEEECCSSCCEEEEETTT
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCEE-EEECCCCCCCCEEEECCC
T ss_conf             9999999998389999999999999986188867799999999998754689997179727-996589984267999999


Q ss_pred             CHHH-------HHHHHHHHHHCCCC
Q ss_conf             1000-------25899986743999
Q gi|254780783|r   85 GMQF-------KSLKRHLKTHHNMT  102 (149)
Q Consensus        85 Gk~~-------K~LkRHL~t~hgLt  102 (149)
                      |+-+       ..+.+.+...+|.+
T Consensus        97 g~i~~~~~~~~~~~~~~~~~~~gf~  121 (150)
T 2w57_A           97 GEVIEFSDDVIEQRQKEIAAKYNVQ  121 (150)
T ss_dssp             CCEEEECCHHHHHHHHHHHHHTTCE
T ss_pred             CCEEEECCHHHHHHHHHHHHHCCCE
T ss_conf             9999835515999999999864998


No 100
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.21  E-value=22  Score=16.35  Aligned_cols=27  Identities=30%  Similarity=0.373  Sum_probs=19.7

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   40 (46)
T 2em3_A           11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCCCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             695899999984888999998211189989


No 101
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription regulator; 2.30A {Thermococcus kodakarensis KOD1} SCOP: c.52.4.1
Probab=27.07  E-value=20  Score=16.57  Aligned_cols=27  Identities=30%  Similarity=0.541  Sum_probs=21.4

Q ss_pred             CEEECCCCH--HHHHHHHHHHHHCCCCHHH
Q ss_conf             459743610--0025899986743999899
Q gi|254780783|r   78 CLYCLEDGM--QFKSLKRHLKTHHNMTPDE  105 (149)
Q Consensus        78 ~iiClecGk--~~K~LkRHL~t~hgLtp~e  105 (149)
                      +--|=.|||  -.-+|.+||+ .||..-.|
T Consensus       154 FYKCe~CgKYvDIe~~~~Hlk-~Hgi~v~e  182 (226)
T 2czr_A          154 FYKCEECGKYVDIENLEAHLR-EHGIKLHE  182 (226)
T ss_dssp             EEECTTTCCEEEGGGHHHHHH-TTTCCGGG
T ss_pred             EEEHHHCCCEECHHHHHHHHH-HCCCCHHH
T ss_conf             876244076303877999998-73964433


No 102
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.02  E-value=21  Score=16.41  Aligned_cols=24  Identities=29%  Similarity=0.317  Sum_probs=17.1

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCC
Q ss_conf             8459743610002---58999867439
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHN  100 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hg  100 (149)
                      .--.|=+|||.|.   .|.+|.++.-|
T Consensus         9 Kpy~C~~CgK~F~~~s~L~~H~r~Htg   35 (42)
T 2yte_A            9 KPYSCAECKETFSDNNRLVQHQKMHTV   35 (42)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHTSC
T ss_pred             CCEECCCCCCEECCHHHHHHHCCCCCC
T ss_conf             896289988952864686766872468


No 103
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=26.92  E-value=20  Score=16.58  Aligned_cols=26  Identities=27%  Similarity=0.554  Sum_probs=20.0

Q ss_pred             HCCCCCEEECC--CCHHHH---HHHHHHHHH
Q ss_conf             13888459743--610002---589998674
Q gi|254780783|r   73 SIENGCLYCLE--DGMQFK---SLKRHLKTH   98 (149)
Q Consensus        73 Si~~d~iiCle--cGk~~K---~LkRHL~t~   98 (149)
                      ...+.--.|..  |||.|.   .|++|.++.
T Consensus        13 h~~ekp~~C~~~~C~K~F~r~~~L~~H~rtH   43 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             CCCCCCEECCCCCCCCCCCCHHHHHHHCCCC
T ss_conf             4789795888889999857535666463340


No 104
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.79  E-value=22  Score=16.30  Aligned_cols=28  Identities=29%  Similarity=0.405  Sum_probs=20.5

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHSCCCT
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             9893899999974878999998112489889


No 105
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=26.65  E-value=22  Score=16.28  Aligned_cols=27  Identities=30%  Similarity=0.497  Sum_probs=19.7

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.+..-|-.|
T Consensus        11 KPy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2emj_A           11 KPFECAECGKSFSISSQLATHQRIHTGEKP   40 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTTSCS
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             793899889861768999987325188989


No 106
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.41  E-value=21  Score=16.43  Aligned_cols=28  Identities=29%  Similarity=0.513  Sum_probs=19.7

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|=+|||.|..   |++|.+..-|-.|
T Consensus        10 Ekpy~C~~C~k~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKP   40 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGGSCCCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             7897899989956778999998105299889


No 107
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.39  E-value=20  Score=16.56  Aligned_cols=28  Identities=25%  Similarity=0.394  Sum_probs=19.8

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|+.   |.+|.+..-|..|
T Consensus        10 ekpy~C~~C~k~F~~~~~L~~H~riHt~ekP   40 (46)
T 2enc_A           10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             8881899899764767888898634399889


No 108
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.25  E-value=20  Score=16.55  Aligned_cols=26  Identities=35%  Similarity=0.448  Sum_probs=18.2

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCC
Q ss_conf             8459743610002---5899986743999
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMT  102 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLt  102 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.
T Consensus        11 kpy~C~~Cgk~F~~~~~L~~H~r~HtgEk   39 (44)
T 2eoj_A           11 NPYECCECGKVFSRKDQLVSHQKTHSGQS   39 (44)
T ss_dssp             CSCEETTTTEECSSHHHHHHHHTTSSSSC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf             89189988987387677899853358998


No 109
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=26.25  E-value=17  Score=16.99  Aligned_cols=28  Identities=29%  Similarity=0.421  Sum_probs=19.2

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.+..-|-.|
T Consensus        10 eKpy~C~~C~k~F~~~~~L~~H~riHtgeKP   40 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKP   40 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC
T ss_pred             CCCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             8795999989872778999998156489889


No 110
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.14  E-value=12  Score=17.88  Aligned_cols=27  Identities=26%  Similarity=0.432  Sum_probs=18.0

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 KPy~C~~Cgk~F~~~~~L~~H~r~HtgekP   39 (42)
T 2ytb_A           10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGP   39 (42)
T ss_dssp             CSBCCTTTTCCBSSHHHHHTTGGGTSCCSC
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             997899988864866788987242088888


No 111
>1d5y_A ROB transcription factor; protein-DNA complex, DNA, transcription/DNA complex; HET: DNA; 2.70A {Escherichia coli} SCOP: a.4.1.8 a.4.1.8 d.60.1.2
Probab=26.13  E-value=35  Score=15.00  Aligned_cols=30  Identities=23%  Similarity=0.359  Sum_probs=22.4

Q ss_pred             EECCCCH-HHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             9743610-00258999867439998999997
Q gi|254780783|r   80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRIK  109 (149)
Q Consensus        80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~k  109 (149)
                      |.+.||= .--.+.|.....+|+||.+||+.
T Consensus        74 ia~~~gf~~~~~f~r~fk~~~g~tP~~~r~~  104 (292)
T 1d5y_A           74 IALQYRFDSQQTFTRAFKKQFAQTPALYRRS  104 (292)
T ss_dssp             HHHHTTCSCHHHHHHHHHHHHSSCHHHHHHC
T ss_pred             HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHC
T ss_conf             9998199855799999999988583888846


No 112
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.04  E-value=19  Score=16.76  Aligned_cols=28  Identities=18%  Similarity=0.310  Sum_probs=19.2

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.+..-|-.|
T Consensus        10 EKpy~C~~C~k~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2elz_A           10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT   40 (46)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             5895899899672867999998215088989


No 113
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.91  E-value=22  Score=16.34  Aligned_cols=23  Identities=22%  Similarity=0.319  Sum_probs=17.2

Q ss_pred             CEEECCCCHHHH---HHHHHHHHHCC
Q ss_conf             459743610002---58999867439
Q gi|254780783|r   78 CLYCLEDGMQFK---SLKRHLKTHHN  100 (149)
Q Consensus        78 ~iiClecGk~~K---~LkRHL~t~hg  100 (149)
                      ---|=+||+.|.   .|++|+++..|
T Consensus         9 PykC~~C~k~F~~~~~L~~H~r~Htg   34 (36)
T 2elt_A            9 PYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CEECCCCCCCCCCHHHHHHHCCCCCC
T ss_conf             98689998871988999988557488


No 114
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.69  E-value=21  Score=16.42  Aligned_cols=27  Identities=33%  Similarity=0.515  Sum_probs=19.2

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgekP   40 (46)
T 2yts_A           11 KPYICNECGKSFIQKSHLNRHRRIHTGEKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGTSSCCS
T ss_pred             CCEECCCCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             795899999830788999998212289889


No 115
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.22  E-value=19  Score=16.67  Aligned_cols=28  Identities=29%  Similarity=0.373  Sum_probs=19.6

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2emp_A           10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHHHHHCCSC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             8383789999934758899998213389889


No 116
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.03  E-value=20  Score=16.55  Aligned_cols=19  Identities=37%  Similarity=0.607  Sum_probs=9.7

Q ss_pred             EEECCCCHHHH---HHHHHHHH
Q ss_conf             59743610002---58999867
Q gi|254780783|r   79 LYCLEDGMQFK---SLKRHLKT   97 (149)
Q Consensus        79 iiClecGk~~K---~LkRHL~t   97 (149)
                      -.|-+||+.|.   .|++|...
T Consensus        19 ~~C~~C~~~f~~~~~l~~H~~~   40 (77)
T 2cot_A           19 YKCDECGKSFSHSSDLSKHRRT   40 (77)
T ss_dssp             SBCSSSCCBCSCHHHHHHHHTT
T ss_pred             CCCCCCCCEECCHHHHHHHHHH
T ss_conf             0899999985876674899986


No 117
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.01  E-value=17  Score=17.08  Aligned_cols=27  Identities=22%  Similarity=0.428  Sum_probs=19.4

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|=+|||.|..   |++|.+..-|-.|
T Consensus        11 Kpy~C~~C~k~F~~~~~L~~H~r~HtgekP   40 (46)
T 2eoy_A           11 KCFKCNKCEKTFSCSKYLTQHERIHTRGVK   40 (46)
T ss_dssp             CCEECSSSCCEESSSHHHHHHHTTCCSCCT
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             791899999884887999998424389488


No 118
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=24.88  E-value=20  Score=16.58  Aligned_cols=24  Identities=29%  Similarity=0.337  Sum_probs=18.2

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCC
Q ss_conf             8459743610002---58999867439
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHN  100 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hg  100 (149)
                      ....|-+||+.|.   .|++|....|+
T Consensus        30 k~~~C~~C~k~f~~~~~l~~H~~~hh~   56 (88)
T 1llm_C           30 KPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf             877554444544788999998536479


No 119
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.81  E-value=27  Score=15.78  Aligned_cols=19  Identities=32%  Similarity=0.571  Sum_probs=8.8

Q ss_pred             EEECCCCHHHHH---HHHHHHH
Q ss_conf             597436100025---8999867
Q gi|254780783|r   79 LYCLEDGMQFKS---LKRHLKT   97 (149)
Q Consensus        79 iiClecGk~~K~---LkRHL~t   97 (149)
                      -.|-+||+.|..   |++|.++
T Consensus        15 y~C~~C~k~f~~~~~L~~H~~~   36 (72)
T 1x6e_A           15 YGCVECGKAFSRSSILVQHQRV   36 (72)
T ss_dssp             EECSSSCCEESSHHHHHHHHHG
T ss_pred             CCCCCCCCEECCHHHHHHHHHH
T ss_conf             1799998873989999999987


No 120
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.56  E-value=19  Score=16.67  Aligned_cols=27  Identities=33%  Similarity=0.513  Sum_probs=18.1

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.+..-|-.|
T Consensus        11 kPy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2ytr_A           11 KPYKCNECGKAFSQTSKLARHQRIHTGEKP   40 (46)
T ss_dssp             CTTCCTTTCCCCSSHHHHHHHHTTTTTCSC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             895889989975768999998331399978


No 121
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.51  E-value=20  Score=16.59  Aligned_cols=28  Identities=29%  Similarity=0.444  Sum_probs=19.9

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.+..-|-.|
T Consensus        10 Ekpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2emh_A           10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP   40 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHCSSC
T ss_pred             CCCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             9796899999950878999998113389889


No 122
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.46  E-value=21  Score=16.47  Aligned_cols=27  Identities=33%  Similarity=0.474  Sum_probs=19.7

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|=+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2yu8_A           11 KPYKCNECGKVFTQNSHLARHRRVHTGGKP   40 (46)
T ss_dssp             SSEECSSSCCEESSSHHHHHHTHHHHSCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             791899999995888999998310189989


No 123
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.42  E-value=21  Score=16.44  Aligned_cols=27  Identities=30%  Similarity=0.400  Sum_probs=19.0

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~C~K~F~~~~~L~~H~r~HtgekP   40 (46)
T 2ytf_A           11 KPFECSECQKAFNTKSNLIVHQRTHTGEKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTSCSSSS
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             798899989986888899998045489889


No 124
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=24.14  E-value=22  Score=16.35  Aligned_cols=26  Identities=31%  Similarity=0.359  Sum_probs=15.5

Q ss_pred             CCCCEEECCCCHHHH---HHHHHHHHHCC
Q ss_conf             888459743610002---58999867439
Q gi|254780783|r   75 ENGCLYCLEDGMQFK---SLKRHLKTHHN  100 (149)
Q Consensus        75 ~~d~iiClecGk~~K---~LkRHL~t~hg  100 (149)
                      .+..-.|=+||+.|.   .|++|.++..|
T Consensus        59 ~~~~~~C~~Cgk~F~~~~~L~~H~r~Htg   87 (90)
T 1a1h_A           59 GEKPFACDICGRKFARSDERKRHTKIHLR   87 (90)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHGGGGC
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf             98882679898952888999999741465


No 125
>2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405}
Probab=23.81  E-value=34  Score=15.06  Aligned_cols=32  Identities=16%  Similarity=0.168  Sum_probs=24.7

Q ss_pred             CCEEECCCC-HHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             845974361-000258999867439998999997
Q gi|254780783|r   77 GCLYCLEDG-MQFKSLKRHLKTHHNMTPDEYRIK  109 (149)
Q Consensus        77 d~iiClecG-k~~K~LkRHL~t~hgLtp~eYR~k  109 (149)
                      -.|-|+.|+ .+|.+|.--.. .||+++++.-+.
T Consensus        26 ~Gi~C~gc~~a~~~tL~eaa~-~~gid~~~ll~e   58 (76)
T 2k53_A           26 NGMHCLGCPSSMGESIEDACA-VHGIDADKLVKE   58 (76)
T ss_dssp             TTCCCCSSCCCCCSBHHHHHH-HHTCCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCHHHHHH-HHCCCHHHHHHH
T ss_conf             699885787766670999999-949799999999


No 126
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.72  E-value=20  Score=16.63  Aligned_cols=28  Identities=32%  Similarity=0.447  Sum_probs=19.3

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP   40 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTTTSCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             9794899989962877899998002389889


No 127
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, monomer, lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=23.71  E-value=39  Score=14.70  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             9999999999997368888899999999999
Q gi|254780783|r   13 FLEMTVDIVAAYVSNHVVPMADIGSLITDVH   43 (149)
Q Consensus        13 l~~lta~IV~A~vs~n~v~~~el~~lI~~v~   43 (149)
                      +.|++.+|.+.|++...++.++|..+|.+.|
T Consensus        58 y~ela~~il~~fi~~~~i~~~~L~~i~~~ay   88 (514)
T 1kl7_A           58 FQDLAFAIMRLYIAQEEIPDADLKDLIKRSY   88 (514)
T ss_dssp             HHHHHHHHHHTTSCTTTSCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             9999999999865954289999999999997


No 128
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.24  E-value=23  Score=16.13  Aligned_cols=27  Identities=30%  Similarity=0.460  Sum_probs=18.9

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |.+|.++.-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2yrj_A           11 KPYRCGECGKAFAQKANLTQHQRIHTGEKP   40 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSSCCS
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf             792899999840879999998300289989


No 129
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.16  E-value=24  Score=16.12  Aligned_cols=23  Identities=30%  Similarity=0.413  Sum_probs=16.4

Q ss_pred             CEEECCCCHHHHH---HHHHHHHHCC
Q ss_conf             4597436100025---8999867439
Q gi|254780783|r   78 CLYCLEDGMQFKS---LKRHLKTHHN  100 (149)
Q Consensus        78 ~iiClecGk~~K~---LkRHL~t~hg  100 (149)
                      --.|-+|||.|..   |.+|.++.-|
T Consensus        12 py~C~~CgK~F~~~s~L~~H~riHtg   37 (44)
T 2eou_A           12 TSECQECGKIFRHSSLLIEHQALHAG   37 (44)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCEECCCHHHHHHCCCCCC
T ss_conf             98289878713842405775226789


No 130
>2osz_A Nucleoporin P58/P45; NPC, structure, structural protein; 2.85A {Rattus norvegicus}
Probab=23.15  E-value=40  Score=14.63  Aligned_cols=38  Identities=11%  Similarity=0.181  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999736888889999999999999995026
Q gi|254780783|r   14 LEMTVDIVAAYVSNHVVPMADIGSLITDVHSALQRVVS   51 (149)
Q Consensus        14 ~~lta~IV~A~vs~n~v~~~el~~lI~~v~~aL~~l~~   51 (149)
                      +|.+=.-+.+....+++++.||..-+...|.++-+|.+
T Consensus        28 IE~~E~hl~s~s~~~~~TPqdL~~~l~~~~esFiALA~   65 (93)
T 2osz_A           28 IEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAA   65 (93)
T ss_dssp             HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999844688889999999999999999999999


No 131
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.03  E-value=30  Score=15.47  Aligned_cols=26  Identities=27%  Similarity=0.434  Sum_probs=18.3

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCC
Q ss_conf             884597436100025---89998674399
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNM  101 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgL  101 (149)
                      +.--.|-+|||.|..   |.+|.++.-|-
T Consensus        10 eKpy~C~~C~k~F~~~~~L~~H~~~Htge   38 (46)
T 2ytd_A           10 EKPYKCSECGKAFHRHTHLNEHRRIHTGY   38 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHTCC
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             59968999998847768888873261988


No 132
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.44  E-value=21  Score=16.44  Aligned_cols=22  Identities=36%  Similarity=0.538  Sum_probs=16.0

Q ss_pred             CEEECCCCHHHHH---HHHHHHHHC
Q ss_conf             4597436100025---899986743
Q gi|254780783|r   78 CLYCLEDGMQFKS---LKRHLKTHH   99 (149)
Q Consensus        78 ~iiClecGk~~K~---LkRHL~t~h   99 (149)
                      --.|-+|||.|..   |++|.+..|
T Consensus        12 py~C~~Cgk~F~~~~~L~~H~r~~H   36 (47)
T 2epx_A           12 PYECIECGKAFIQNTSLIRHWRYYH   36 (47)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHTTTT
T ss_pred             CEECCCCCCEECCHHHHHHHCCCCC
T ss_conf             9489999999386689997670674


No 133
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.41  E-value=23  Score=16.15  Aligned_cols=26  Identities=35%  Similarity=0.469  Sum_probs=18.0

Q ss_pred             CEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             459743610002---58999867439998
Q gi|254780783|r   78 CLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      --.|-+|||.|.   .|++|.++.-|-.|
T Consensus        12 py~C~~Cgk~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2yti_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKP   40 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTTTSCSCC
T ss_pred             CEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             92899989986888999998321188989


No 134
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=22.28  E-value=17  Score=16.98  Aligned_cols=20  Identities=40%  Similarity=0.627  Sum_probs=13.1

Q ss_pred             EEECCCCHHHHHHHHHHHHHC
Q ss_conf             597436100025899986743
Q gi|254780783|r   79 LYCLEDGMQFKSLKRHLKTHH   99 (149)
Q Consensus        79 iiClecGk~~K~LkRHL~t~h   99 (149)
                      --|-.|||.| +||-.|-|.|
T Consensus         4 y~c~~c~krf-slkhqleth~   23 (28)
T 2kvf_A            4 YSCSVCGKRF-SLKHQMETHY   23 (28)
T ss_dssp             EECSSSCCEE-SCHHHHHHHH
T ss_pred             CCCCCCCCCC-CHHHHHHHCE
T ss_conf             3016433300-1134312113


No 135
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=22.08  E-value=27  Score=15.69  Aligned_cols=25  Identities=28%  Similarity=0.577  Sum_probs=17.9

Q ss_pred             EEE--CCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             597--43610002---58999867439998
Q gi|254780783|r   79 LYC--LEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        79 iiC--lecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      -.|  -+||+.|.   .|++|.++.+|-.|
T Consensus        20 y~C~~~~C~k~F~~~~~l~~H~~~H~~~k~   49 (73)
T 1f2i_G           20 YACPVESCDRRFSRSDELTRHIRIHTGQKP   49 (73)
T ss_dssp             EECSSTTBCCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf             539988788932978999999986089838


No 136
>3abq_B Ethanolamine ammonia-lyase light chain; (beta/alpha)8 fold, cobalt, cobalamin; HET: B12; 2.05A {Escherichia coli} PDB: 3abo_B* 3abr_B* 3abs_B*
Probab=22.07  E-value=20  Score=16.58  Aligned_cols=92  Identities=10%  Similarity=0.167  Sum_probs=57.6

Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCC
Q ss_conf             99973688888999999999999999502666665557854589985736513888459743610002589998674399
Q gi|254780783|r   22 AAYVSNHVVPMADIGSLITDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQFKSLKRHLKTHHNM  101 (149)
Q Consensus        22 ~A~vs~n~v~~~el~~lI~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~K~LkRHL~t~hgL  101 (149)
                      +++--++.|...+|-.+|.+|-+-+......   +..........    ...+..|.  |                ..++
T Consensus         4 ~~~~~~~~m~e~~l~~iv~~vl~e~~~~~~~---~~~~~~~~~~~----~~~~~~~~--~----------------~~di   58 (306)
T 3abq_B            4 SSHHHHHHMDQKQIEEIVRSVMASMGQAAPA---PSEAKCATTNC----AAPVTSES--C----------------ALDL   58 (306)
T ss_dssp             ----------------------------------------------------------------------------CCCT
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCC----CCCCCCCC--C----------------CCCC
T ss_conf             4332112579999999999999996267888---87766667888----88765445--5----------------6787


Q ss_pred             CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
Q ss_conf             989999972737988322999999999999981998101
Q gi|254780783|r  102 TPDEYRIKWNLASDYPMVSREYATTRSKLAKNMGLGRGR  140 (149)
Q Consensus       102 tp~eYR~kwGLp~dyPlvAp~Ys~~Rs~~Ak~~GLg~~~  140 (149)
                      |..+.|..+|.+  -|--.-.|++-|+.-.-.+|||+-.
T Consensus        59 ~~~~~~~~~~v~--np~~~d~w~~Lr~~T~ARIglGRaG   95 (306)
T 3abq_B           59 GSAEAKAWIGVE--NPHRADVLTELRRSTVARVCTGRAG   95 (306)
T ss_dssp             TSHHHHHCCCCS--SCSCHHHHHHHHHTCSSCCSCCCBT
T ss_pred             CHHHHHHHCCCC--CCCCHHHHHHHHHCCHHHEECCCCC
T ss_conf             305578760899--9888409999984372750315668


No 137
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.06  E-value=25  Score=15.96  Aligned_cols=26  Identities=27%  Similarity=0.504  Sum_probs=18.8

Q ss_pred             CEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             4597436100025---8999867439998
Q gi|254780783|r   78 CLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      --.|-+|||.|..   |.+|.+..-|-.|
T Consensus        12 py~C~~Cgk~F~~~s~L~~H~riHtgekP   40 (46)
T 2ytm_A           12 PYKCMECGKAFGDNSSCTQHQRLHTGQRP   40 (46)
T ss_dssp             SSSBTTTTBCCSSHHHHHHHHHHHHSCCC
T ss_pred             CEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             96899989964877999998131489789


No 138
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.93  E-value=18  Score=16.92  Aligned_cols=27  Identities=33%  Similarity=0.509  Sum_probs=18.3

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCC
Q ss_conf             884597436100025---899986743999
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMT  102 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLt  102 (149)
                      +.--.|-+|||.|..   |.+|.+..-|-+
T Consensus        10 eKPy~C~~CgK~F~~~s~L~~HqriHtgE~   39 (44)
T 2eox_A           10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKS   39 (44)
T ss_dssp             CCCEEETTTTEEESSSHHHHTTHHHHCCCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHCCCCCCCC
T ss_conf             849489898884086488999741348899


No 139
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.81  E-value=24  Score=16.05  Aligned_cols=28  Identities=32%  Similarity=0.437  Sum_probs=19.1

Q ss_pred             CCCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             884597436100025---8999867439998
Q gi|254780783|r   76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      +.--.|-+|||.|..   |++|.++.-|-.|
T Consensus        10 ekpy~C~~Cgk~F~~~~~L~~H~r~HtgEKP   40 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKP   40 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC
T ss_pred             CCCEECCCCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             9793899879870878999998202087979


No 140
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=21.79  E-value=43  Score=14.46  Aligned_cols=74  Identities=9%  Similarity=0.025  Sum_probs=40.9

Q ss_pred             HCCCCCHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH-CCCCCEEECCCCHHH-------
Q ss_conf             36888889999999---------9999999950266666555785458998573651-388845974361000-------
Q gi|254780783|r   26 SNHVVPMADIGSLI---------TDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKS-IENGCLYCLEDGMQF-------   88 (149)
Q Consensus        26 s~n~v~~~el~~lI---------~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kS-i~~d~iiClecGk~~-------   88 (149)
                      ....+++++|-..+         .+||.+|..|....-.-.......  .+. -.-. -...+++|-.||+-+       
T Consensus        34 ~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~~~gii~~i~~~~~--~~~-y~~~~~~h~h~iC~~Cg~i~~~~~~~l  110 (145)
T 2fe3_A           34 SMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDA--SSR-FDFVTSDHYHAICENCGKIVDFHYPGL  110 (145)
T ss_dssp             CSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEEECCTTS--CCE-EEECCCCEEEEEETTTCCEEECCCCCC
T ss_pred             CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECCC--CEE-EECCCCCCEEEEECCCCCEEEECCCCH
T ss_conf             89999999999999850789888899999999985521799971898--179-953788520799889998898336106


Q ss_pred             HHHHHHHHHHCCCC
Q ss_conf             25899986743999
Q gi|254780783|r   89 KSLKRHLKTHHNMT  102 (149)
Q Consensus        89 K~LkRHL~t~hgLt  102 (149)
                      ..+.+.+...+|.+
T Consensus       111 ~~~~~~~~~~~gf~  124 (145)
T 2fe3_A          111 DEVEQLAAHVTGFK  124 (145)
T ss_dssp             HHHHHHHHHHHCCE
T ss_pred             HHHHHHHHHHCCCE
T ss_conf             68999888867988


No 141
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.57  E-value=27  Score=15.70  Aligned_cols=27  Identities=22%  Similarity=0.359  Sum_probs=18.8

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      ..-.|=+|||.|..   |++|.++.-|-.|
T Consensus        11 kpy~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2eom_A           11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKP   40 (46)
T ss_dssp             SSCCCSSSCCCCSSHHHHHHHHHHHSSCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             794899899681766889998203289889


No 142
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.42  E-value=22  Score=16.35  Aligned_cols=27  Identities=30%  Similarity=0.429  Sum_probs=18.6

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |.+|.++.-|-.|
T Consensus        11 Kpy~C~~CgK~F~~~s~L~~H~r~HtgekP   40 (46)
T 2ytp_A           11 RHYECSECGKAFARKSTLIMHQRIHTGEKP   40 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSCCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf             894889989834668999988245489889


No 143
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, gene regulation; 2.70A {Mycobacterium tuberculosis}
Probab=21.36  E-value=44  Score=14.40  Aligned_cols=85  Identities=13%  Similarity=0.097  Sum_probs=46.6

Q ss_pred             HHHHHHH-HCCCCCHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHH
Q ss_conf             9999997-36888889999999---------9999999950266666555785458998573651388845974361000
Q gi|254780783|r   19 DIVAAYV-SNHVVPMADIGSLI---------TDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQF   88 (149)
Q Consensus        19 ~IV~A~v-s~n~v~~~el~~lI---------~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~   88 (149)
                      .|..... ....++++||-..+         .+||.+|..|....-.-......... .-.....-...+++|..||+-+
T Consensus        15 ~Il~~l~~~~~~~sa~ei~~~l~~~~~~i~~aTVYR~L~~L~~~gli~~i~~~~~~~-~y~~~~~~~h~h~iC~~Cg~i~   93 (131)
T 2o03_A           15 AISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGES-VYRRCSEHHHHHLVCRSCGSTI   93 (131)
T ss_dssp             HHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSEEEEECTTSCE-EEEECCSSSCEEEEETTTCCEE
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCE-EEEECCCCCEEEEEECCCCCEE
T ss_conf             999999808999899999999997588998889999999998689489998089958-9985798633789985899999


Q ss_pred             -------HHHHHHHHHHCCCCHH
Q ss_conf             -------2589998674399989
Q gi|254780783|r   89 -------KSLKRHLKTHHNMTPD  104 (149)
Q Consensus        89 -------K~LkRHL~t~hgLtp~  104 (149)
                             ..+.+++...+|.+..
T Consensus        94 ~i~~~~l~~~~~~i~~~~gf~i~  116 (131)
T 2o03_A           94 EVGDHEVEAWAAEVATKHGFSDV  116 (131)
T ss_dssp             EECCHHHHHHHHHHHHHTTCSSC
T ss_pred             EECCHHHHHHHHHHHHHCCCEEE
T ss_conf             95256688999999986499897


No 144
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 2raw_A 1f3h_A 1m4m_A 2rax_A 1xox_A
Probab=21.13  E-value=25  Score=15.94  Aligned_cols=31  Identities=16%  Similarity=0.086  Sum_probs=21.0

Q ss_pred             CCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf             8884597436100025899986743999899999727
Q gi|254780783|r   75 ENGCLYCLEDGMQFKSLKRHLKTHHNMTPDEYRIKWN  111 (149)
Q Consensus        75 ~~d~iiClecGk~~K~LkRHL~t~hgLtp~eYR~kwG  111 (149)
                      .+|.|.|+-||+.+.-.      .-+=+|-+--+||.
T Consensus        51 ~~D~v~Cf~C~~~l~~W------e~~DdP~~eH~~~~   81 (142)
T 2qfa_A           51 EPDLAQCFFCFKELEGW------EPDDDPIEEHKKHS   81 (142)
T ss_dssp             BTTCEEETTTCCEECCC------CTTCCHHHHHHHHC
T ss_pred             CCCEEEECCCCCCCCCC------CCCCCHHHHHHHHC
T ss_conf             99868967467883788------89999999999988


No 145
>3boq_A Transcriptional regulator, MARR family; structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=21.10  E-value=39  Score=14.71  Aligned_cols=22  Identities=18%  Similarity=0.300  Sum_probs=10.7

Q ss_pred             HHHHHHHHCCCCHHHHHHHCCC
Q ss_conf             8999867439998999997273
Q gi|254780783|r   91 LKRHLKTHHNMTPDEYRIKWNL  112 (149)
Q Consensus        91 LkRHL~t~hgLtp~eYR~kwGL  112 (149)
                      +-++|...||||+.+|+.-+-|
T Consensus        35 l~~~l~~~~glt~~q~~vL~~L   56 (160)
T 3boq_A           35 LNRQLLDETGLSLAKFDAMAQL   56 (160)
T ss_dssp             HHHHHHHHHSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHH
T ss_conf             9999988819299999999999


No 146
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.84  E-value=39  Score=14.68  Aligned_cols=27  Identities=41%  Similarity=0.663  Sum_probs=21.5

Q ss_pred             CCCCEEECCCCHHH---HHHHHHHHHHCCC
Q ss_conf             88845974361000---2589998674399
Q gi|254780783|r   75 ENGCLYCLEDGMQF---KSLKRHLKTHHNM  101 (149)
Q Consensus        75 ~~d~iiClecGk~~---K~LkRHL~t~hgL  101 (149)
                      ......|-||--+|   -+||||.+..|+=
T Consensus         7 eNg~~FCneCD~kF~Ee~sLK~h~LqvHsD   36 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSD   36 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCT
T ss_pred             CCCCEEECCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             687677434541021577887645313146


No 147
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.62  E-value=26  Score=15.82  Aligned_cols=27  Identities=30%  Similarity=0.485  Sum_probs=18.7

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|..   |++|.+..-|-.|
T Consensus        11 kpy~C~~C~k~F~~~~~l~~H~riHtgeKP   40 (46)
T 2eq4_A           11 KLYNCKECGKSFSRAPCLLKHERLHSGEKP   40 (46)
T ss_dssp             CCCCBTTTTBCCSCHHHHHHHHHHCCSSSC
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             882899889896867899998613399879


No 148
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=20.53  E-value=25  Score=15.91  Aligned_cols=27  Identities=22%  Similarity=0.371  Sum_probs=18.7

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|=+|||.|.   .|.+|.++.-|-.|
T Consensus        11 Kpy~C~~CgK~F~~~s~L~~H~r~HtgeKP   40 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKP   40 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGGSSSCCC
T ss_pred             CCEECCCCCCEECCHHHHHHHCCCCCCCCC
T ss_conf             897899829980864676676035699789


No 149
>1lva_A Selenocysteine-specific elongation factor; winged-helix, translation; 2.12A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35 a.4.5.35 a.4.5.35 PDB: 2uwm_A 2ply_A 1wsu_A
Probab=20.48  E-value=36  Score=14.93  Aligned_cols=32  Identities=13%  Similarity=0.103  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
Q ss_conf             00025899986743999899999727379883
Q gi|254780783|r   86 MQFKSLKRHLKTHHNMTPDEYRIKWNLASDYP  117 (149)
Q Consensus        86 k~~K~LkRHL~t~hgLtp~eYR~kwGLp~dyP  117 (149)
                      ..++.+-+++.....+|..++|..+|+...|-
T Consensus       202 ~~~~~~l~~l~~~~~itv~~~rd~~g~SRK~a  233 (258)
T 1lva_A          202 GEAREVIKNLASTGPFGLAEARDALGSSRKYV  233 (258)
T ss_dssp             HHHHHHHHHHHTTSCBCHHHHHHHHTCCHHHH
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH
T ss_conf             99999999788749874999998879879999


No 150
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.32  E-value=35  Score=15.02  Aligned_cols=27  Identities=26%  Similarity=0.360  Sum_probs=19.2

Q ss_pred             CCEEECCCCHHHH---HHHHHHHHHCCCCH
Q ss_conf             8459743610002---58999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K---~LkRHL~t~hgLtp  103 (149)
                      .--.|-+|||.|.   .|++|.++.-|-.|
T Consensus        11 Kpy~C~~C~k~F~~~~~L~~H~r~HtgeKP   40 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERH   40 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHHHSCCSS
T ss_pred             CCEECCCCCCEECCHHHHHHHHCCCCCCCC
T ss_conf             894899879881778999998125499888


No 151
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.22  E-value=34  Score=15.06  Aligned_cols=27  Identities=26%  Similarity=0.376  Sum_probs=18.9

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             84597436100025---8999867439998
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      .--.|=+|||.|..   |++|.+..-|-.|
T Consensus        11 Kpy~C~~Cgk~F~~~~~l~~H~riHtgekP   40 (46)
T 2eml_A           11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKP   40 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGSSCCC
T ss_pred             CCEECCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             797789869980878999998212088979


No 152
>1dtd_B Metallocarboxypeptidase inhibitor; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Hirudo medicinalis} SCOP: g.30.1.1 PDB: 1dtv_A 1zfi_A 1zfl_A 2abz_C
Probab=20.21  E-value=27  Score=15.74  Aligned_cols=13  Identities=8%  Similarity=0.059  Sum_probs=10.6

Q ss_pred             CCCCCEEECCCCH
Q ss_conf             3888459743610
Q gi|254780783|r   74 IENGCLYCLEDGM   86 (149)
Q Consensus        74 i~~d~iiClecGk   86 (149)
                      .+||.+.||+|-.
T Consensus         7 yqpdqvccficrg   19 (61)
T 1dtd_B            7 YQPDQVCCFICRG   19 (61)
T ss_dssp             ECSSCEEEEEEES
T ss_pred             ECCCCEEEEEECC
T ss_conf             2788379999558


No 153
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.18  E-value=25  Score=16.00  Aligned_cols=25  Identities=36%  Similarity=0.454  Sum_probs=17.5

Q ss_pred             CCEEECCCCHHHHH---HHHHHHHHCCC
Q ss_conf             84597436100025---89998674399
Q gi|254780783|r   77 GCLYCLEDGMQFKS---LKRHLKTHHNM  101 (149)
Q Consensus        77 d~iiClecGk~~K~---LkRHL~t~hgL  101 (149)
                      .--.|-+|||.|..   |++|.+..-|-
T Consensus        11 Kpy~C~~Cgk~F~~~s~L~~H~r~HTGE   38 (44)
T 2en7_A           11 KPYVCNECGKAFRSKSYLIIHTRTHTGE   38 (44)
T ss_dssp             SSSCCTTTCCCCSSHHHHHHHHTTTCCS
T ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf             8818899989978778989871365889


No 154
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.08  E-value=25  Score=16.00  Aligned_cols=26  Identities=35%  Similarity=0.457  Sum_probs=17.8

Q ss_pred             CEEECCCCHHHHH---HHHHHHHHCCCCH
Q ss_conf             4597436100025---8999867439998
Q gi|254780783|r   78 CLYCLEDGMQFKS---LKRHLKTHHNMTP  103 (149)
Q Consensus        78 ~iiClecGk~~K~---LkRHL~t~hgLtp  103 (149)
                      --.|-+|||.|..   |++|.++.-|-.|
T Consensus        12 py~C~~Cgk~F~~~s~L~~H~r~HtgekP   40 (46)
T 2enf_A           12 PYKCNECGKVFTQNSHLVRHRGIHTGEKP   40 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHTTTTTSSC
T ss_pred             CEECCCCCCEECCHHHHHHHHHCCCCCCC
T ss_conf             92899999872878999998300288989


Done!