Query gi|254780783|ref|YP_003065196.1| transcription regulator protein [Candidatus Liberibacter asiaticus str. psy62] Match_columns 149 No_of_seqs 114 out of 407 Neff 4.8 Searched_HMMs 23785 Date Mon May 30 13:27:53 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780783.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 2jsp_A Transcriptional regulat 100.0 4.5E-38 1.9E-42 264.0 0.1 85 59-143 2-86 (87) 2 3mkl_A HTH-type transcriptiona 80.2 0.5 2.1E-05 26.8 1.3 35 78-112 75-110 (120) 3 2ctd_A Zinc finger protein 512 77.9 0.66 2.8E-05 26.0 1.3 26 75-101 31-60 (96) 4 2wbt_A B-129; zinc finger; 2.7 74.6 1.1 4.7E-05 24.6 1.8 19 79-97 75-96 (129) 5 2ct5_A Zinc finger BED domain 70.7 1.8 7.4E-05 23.3 2.0 34 73-109 24-63 (73) 6 1wir_A Protein arginine N-meth 70.3 3.4 0.00014 21.5 3.4 49 77-126 14-66 (121) 7 1d4u_A Nucleotide excision rep 69.5 1.1 4.8E-05 24.5 0.8 16 74-89 1-16 (111) 8 3oio_A Transcriptional regulat 65.6 1.9 7.9E-05 23.1 1.3 35 79-113 77-112 (113) 9 3oou_A LIN2118 protein; protei 65.3 1.7 7.2E-05 23.4 1.0 31 80-110 76-107 (108) 10 2gqj_A Zinc finger protein KIA 59.1 4.6 0.00019 20.6 2.4 34 67-100 12-50 (98) 11 1pqv_S STP-alpha, transcriptio 57.3 2.3 9.5E-05 22.6 0.5 18 31-48 57-74 (309) 12 2epa_A Krueppel-like factor 10 55.6 3.9 0.00016 21.1 1.5 26 78-103 17-47 (72) 13 3eyy_A Putative iron uptake re 54.7 12 0.00052 17.9 4.8 77 26-103 30-122 (145) 14 1fs1_B SKP1, cyclin A/CDK2-ass 52.9 5.1 0.00021 20.4 1.7 18 99-116 122-139 (141) 15 3mn2_A Probable ARAC family tr 51.5 4.4 0.00019 20.8 1.2 31 80-110 75-106 (108) 16 2p1m_A SKP1-like protein 1A; F 49.3 8.3 0.00035 19.0 2.4 19 99-117 126-144 (160) 17 1bl0_A Protein (multiple antib 47.4 5.2 0.00022 20.3 1.1 34 79-112 81-115 (129) 18 1wjp_A Zinc finger protein 295 47.4 6.9 0.00029 19.5 1.7 24 77-100 68-94 (107) 19 3gbg_A TCP pilus virulence reg 47.3 5.5 0.00023 20.1 1.2 31 80-111 191-221 (276) 20 2em5_A ZFP-95, zinc finger pro 46.9 4.8 0.0002 20.5 0.8 27 77-103 11-40 (46) 21 2ej4_A Zinc finger protein ZIC 46.5 5.2 0.00022 20.3 1.0 23 78-100 25-50 (95) 22 1dvp_A HRS, hepatocyte growth 46.4 3.4 0.00014 21.5 -0.0 55 37-95 124-179 (220) 23 2em4_A Zinc finger protein 28 45.1 6.9 0.00029 19.5 1.4 27 77-103 11-40 (46) 24 2adr_A ADR1; transcription reg 43.8 5.7 0.00024 20.1 0.8 21 79-99 31-54 (60) 25 2emi_A Zinc finger protein 484 43.7 7.7 0.00032 19.2 1.5 28 76-103 10-40 (46) 26 1mzb_A Ferric uptake regulatio 43.5 18 0.00078 16.8 4.3 86 17-103 20-123 (136) 27 2eos_A B-cell lymphoma 6 prote 42.9 5.9 0.00025 20.0 0.8 27 77-103 10-39 (42) 28 2k9s_A Arabinose operon regula 42.5 6.8 0.00029 19.6 1.1 96 13-109 4-105 (107) 29 2ast_A S-phase kinase-associat 42.4 12 0.00052 17.9 2.4 19 99-117 127-145 (159) 30 2gli_A Protein (five-finger GL 40.4 9.5 0.0004 18.6 1.5 25 76-100 126-155 (155) 31 3mks_A Suppressor of kinetocho 40.4 13 0.00054 17.8 2.2 19 99-117 134-152 (169) 32 2el6_A Zinc finger protein 268 39.7 9.4 0.0004 18.7 1.4 28 76-103 10-40 (46) 33 2ep1_A Zinc finger protein 484 39.1 9.5 0.0004 18.6 1.3 26 78-103 12-40 (46) 34 2eoe_A Zinc finger protein 347 38.8 12 0.00052 17.9 1.9 27 77-103 11-40 (46) 35 2em9_A Zinc finger protein 224 37.5 10 0.00043 18.4 1.3 27 77-103 11-40 (46) 36 2en6_A Zinc finger protein 268 37.0 13 0.00054 17.8 1.7 28 76-103 10-40 (46) 37 2drp_A Protein (tramtrack DNA- 36.7 13 0.00053 17.8 1.7 22 79-100 41-65 (66) 38 2ytq_A Zinc finger protein 268 36.0 10 0.00042 18.5 1.1 27 77-103 11-40 (46) 39 2elr_A Zinc finger protein 406 35.8 9.1 0.00038 18.7 0.8 21 76-96 7-30 (36) 40 2emx_A Zinc finger protein 268 35.7 12 0.00052 17.9 1.5 28 76-103 8-38 (44) 41 2d9h_A Zinc finger protein 692 35.6 11 0.00047 18.2 1.3 22 79-100 39-63 (78) 42 2ep2_A Zinc finger protein 484 35.4 11 0.00048 18.1 1.3 27 77-103 11-40 (46) 43 1ard_A Yeast transcription fac 35.3 10 0.00044 18.4 1.1 22 79-100 3-27 (29) 44 2yto_A Zinc finger protein 484 35.0 13 0.00056 17.7 1.6 27 77-103 11-40 (46) 45 2emb_A Zinc finger protein 473 34.8 11 0.00045 18.3 1.1 27 76-102 10-39 (44) 46 2rpc_A Zinc finger protein ZIC 34.7 9.5 0.0004 18.6 0.8 28 75-102 22-52 (155) 47 2ebt_A Krueppel-like factor 5; 34.6 19 0.00081 16.7 2.3 26 79-104 16-46 (100) 48 2en3_A ZFP-95, zinc finger pro 34.4 8.7 0.00037 18.9 0.6 28 76-103 10-40 (46) 49 2j7j_A Transcription factor II 34.3 11 0.00047 18.2 1.1 17 81-97 67-83 (85) 50 2ct1_A Transcriptional repress 34.2 14 0.00058 17.6 1.6 21 79-99 16-39 (77) 51 2epr_A POZ-, at HOOK-, and zin 34.2 15 0.00063 17.4 1.7 27 76-102 10-39 (48) 52 2epq_A POZ-, at HOOK-, and zin 34.2 16 0.00067 17.2 1.9 28 76-103 8-38 (45) 53 2yso_A ZFP-95, zinc finger pro 33.8 12 0.00052 17.9 1.3 27 77-103 11-40 (46) 54 3lsg_A Two-component response 33.8 8.3 0.00035 19.0 0.4 29 80-108 74-103 (103) 55 2enh_A Zinc finger protein 28 33.5 11 0.00048 18.1 1.0 28 76-103 10-40 (46) 56 2ely_A Zinc finger protein 224 33.3 14 0.00061 17.5 1.5 26 78-103 12-40 (46) 57 2epw_A Zinc finger protein 268 33.3 13 0.00055 17.7 1.3 27 77-103 11-40 (46) 58 2o8i_A AGR_C_4230P, hypothetic 33.2 12 0.00052 17.9 1.2 12 104-115 105-116 (165) 59 2epv_A Zinc finger protein 268 33.0 14 0.00059 17.5 1.4 28 76-103 10-40 (44) 60 2epc_A Zinc finger protein 32; 32.5 13 0.00057 17.7 1.3 27 77-103 10-39 (42) 61 2el5_A Zinc finger protein 268 32.5 14 0.00059 17.5 1.4 27 77-103 9-38 (42) 62 2eoo_A ZFP-95, zinc finger pro 32.5 11 0.00047 18.2 0.8 28 76-103 10-40 (46) 63 2em2_A Zinc finger protein 28 32.4 16 0.00067 17.2 1.6 28 76-103 10-40 (46) 64 2yu5_A Zinc finger protein 473 32.4 12 0.00049 18.0 0.9 25 77-101 11-38 (44) 65 2q37_A OHCU decarboxylase; 2-O 32.3 13 0.00055 17.8 1.2 11 104-114 121-131 (181) 66 2epz_A Zinc finger protein 28 32.1 12 0.00052 17.9 1.0 28 76-103 10-40 (46) 67 2eq1_A Zinc finger protein 347 32.1 12 0.0005 18.0 0.9 26 78-103 12-40 (46) 68 2ema_A Zinc finger protein 347 31.9 13 0.00056 17.7 1.2 28 76-103 10-40 (46) 69 2ytg_A ZFP-95, zinc finger pro 31.8 9.2 0.00039 18.7 0.3 27 77-103 11-40 (46) 70 2ent_A Krueppel-like factor 15 31.8 13 0.00054 17.8 1.1 26 78-103 12-42 (48) 71 2emk_A Zinc finger protein 28 31.8 15 0.00065 17.3 1.5 27 77-103 11-40 (46) 72 2emg_A Zinc finger protein 484 31.6 13 0.00054 17.8 1.0 27 77-103 11-40 (46) 73 2ytt_A Zinc finger protein 473 31.5 9.5 0.0004 18.6 0.4 27 77-103 11-40 (46) 74 2eow_A Zinc finger protein 347 31.4 16 0.00067 17.2 1.5 28 76-103 10-40 (46) 75 2o70_A OHCU decarboxylase; URI 31.3 14 0.00059 17.6 1.2 12 104-115 109-120 (174) 76 2k5e_A Uncharacterized protein 31.2 29 0.0012 15.5 2.8 34 76-110 27-61 (73) 77 2en2_A B-cell lymphoma 6 prote 31.1 12 0.00049 18.0 0.8 27 77-103 10-39 (42) 78 3o7i_A OHCU decarboxylase; lya 30.6 14 0.00061 17.5 1.2 20 104-125 130-149 (189) 79 2en8_A Zinc finger protein 224 30.3 14 0.0006 17.5 1.1 28 76-103 10-40 (46) 80 2ept_A Zinc finger protein 32; 30.2 13 0.00054 17.8 0.8 28 76-103 8-38 (41) 81 2em6_A Zinc finger protein 224 30.1 12 0.00052 17.9 0.7 28 76-103 10-40 (46) 82 2eof_A Zinc finger protein 268 30.1 17 0.00073 16.9 1.5 25 76-100 10-37 (44) 83 2en9_A Zinc finger protein 28 30.0 17 0.0007 17.1 1.4 26 78-103 12-40 (46) 84 2eme_A Zinc finger protein 473 29.9 17 0.00073 16.9 1.5 28 76-103 10-40 (46) 85 2ep0_A Zinc finger protein 28 29.5 15 0.00061 17.4 1.0 27 77-103 11-40 (46) 86 1x5w_A Zinc finger protein 64, 29.4 15 0.00064 17.3 1.1 25 77-101 36-63 (70) 87 2eoh_A Zinc finger protein 28 29.4 16 0.00069 17.1 1.3 28 76-103 10-40 (46) 88 2eps_A POZ-, at HOOK-, and zin 29.3 16 0.00067 17.2 1.2 21 79-99 13-36 (54) 89 1x6h_A Transcriptional repress 28.9 25 0.001 16.0 2.1 25 78-102 47-74 (86) 90 2ytj_A Zinc finger protein 484 28.9 17 0.00071 17.0 1.3 28 76-103 10-40 (46) 91 2eop_A Zinc finger protein 268 28.8 15 0.00062 17.4 1.0 27 77-103 11-40 (46) 92 1p7a_A BF3, BKLF, kruppel-like 28.4 21 0.00087 16.5 1.7 21 77-97 10-33 (37) 93 2ytk_A Zinc finger protein 347 28.4 19 0.00079 16.7 1.4 28 76-103 10-40 (46) 94 2ene_A Zinc finger protein 347 28.3 16 0.00069 17.1 1.1 27 77-103 11-40 (46) 95 2em7_A Zinc finger protein 224 27.9 17 0.0007 17.1 1.1 28 76-103 10-40 (46) 96 2eq3_A Zinc finger protein 347 27.7 17 0.00071 17.1 1.1 27 77-103 11-40 (46) 97 2eq0_A Zinc finger protein 347 27.5 17 0.00072 17.0 1.1 27 77-103 11-40 (46) 98 2eor_A Zinc finger protein 224 27.3 19 0.00078 16.8 1.2 28 76-103 10-40 (46) 99 2w57_A Ferric uptake regulatio 27.2 34 0.0014 15.1 2.7 86 16-102 18-121 (150) 100 2em3_A Zinc finger protein 28 27.2 22 0.00091 16.3 1.6 27 77-103 11-40 (46) 101 2czr_A TBP-interacting protein 27.1 20 0.00084 16.6 1.4 27 78-105 154-182 (226) 102 2yte_A Zinc finger protein 473 27.0 21 0.00089 16.4 1.5 24 77-100 9-35 (42) 103 1ncs_A Peptide M30F, transcrip 26.9 20 0.00083 16.6 1.3 26 73-98 13-43 (47) 104 2emm_A ZFP-95, zinc finger pro 26.8 22 0.00093 16.3 1.5 28 76-103 10-40 (46) 105 2emj_A Zinc finger protein 28 26.6 22 0.00093 16.3 1.5 27 77-103 11-40 (46) 106 2en1_A Zinc finger protein 224 26.4 21 0.00088 16.4 1.4 28 76-103 10-40 (46) 107 2enc_A Zinc finger protein 224 26.4 20 0.00084 16.6 1.3 28 76-103 10-40 (46) 108 2eoj_A Zinc finger protein 268 26.3 20 0.00085 16.6 1.3 26 77-102 11-39 (44) 109 2em0_A Zinc finger protein 224 26.2 17 0.00072 17.0 0.9 28 76-103 10-40 (46) 110 2ytb_A Zinc finger protein 32; 26.1 12 0.00052 17.9 0.2 27 77-103 10-39 (42) 111 1d5y_A ROB transcription facto 26.1 35 0.0015 15.0 2.5 30 80-109 74-104 (292) 112 2elz_A Zinc finger protein 224 26.0 19 0.00079 16.8 1.1 28 76-103 10-40 (46) 113 2elt_A Zinc finger protein 406 25.9 22 0.00091 16.3 1.4 23 78-100 9-34 (36) 114 2yts_A Zinc finger protein 484 25.7 21 0.00089 16.4 1.3 27 77-103 11-40 (46) 115 2emp_A Zinc finger protein 347 25.2 19 0.00081 16.7 1.0 28 76-103 10-40 (46) 116 2cot_A Zinc finger protein 435 25.0 20 0.00085 16.5 1.1 19 79-97 19-40 (77) 117 2eoy_A Zinc finger protein 473 25.0 17 0.0007 17.1 0.7 27 77-103 11-40 (46) 118 1llm_C Chimera of ZIF23-GCN4; 24.9 20 0.00084 16.6 1.0 24 77-100 30-56 (88) 119 1x6e_A Zinc finger protein 24; 24.8 27 0.0011 15.8 1.7 19 79-97 15-36 (72) 120 2ytr_A Zinc finger protein 347 24.6 19 0.00081 16.7 0.9 27 77-103 11-40 (46) 121 2emh_A Zinc finger protein 484 24.5 20 0.00083 16.6 1.0 28 76-103 10-40 (46) 122 2yu8_A Zinc finger protein 347 24.5 21 0.00087 16.5 1.1 27 77-103 11-40 (46) 123 2ytf_A Zinc finger protein 268 24.4 21 0.00088 16.4 1.1 27 77-103 11-40 (46) 124 1a1h_A QGSR zinc finger peptid 24.1 22 0.00091 16.3 1.1 26 75-100 59-87 (90) 125 2k53_A A3DK08 protein; NESG, C 23.8 34 0.0014 15.1 2.1 32 77-109 26-58 (76) 126 2ep3_A Zinc finger protein 484 23.7 20 0.00082 16.6 0.8 28 76-103 10-40 (46) 127 1kl7_A Threonine synthase; thr 23.7 39 0.0016 14.7 2.8 31 13-43 58-88 (514) 128 2yrj_A Zinc finger protein 473 23.2 23 0.00098 16.1 1.1 27 77-103 11-40 (46) 129 2eou_A Zinc finger protein 473 23.2 24 0.00099 16.1 1.1 23 78-100 12-37 (44) 130 2osz_A Nucleoporin P58/P45; NP 23.1 40 0.0017 14.6 4.8 38 14-51 28-65 (93) 131 2ytd_A Zinc finger protein 473 23.0 30 0.0012 15.5 1.6 26 76-101 10-38 (46) 132 2epx_A Zinc finger protein 28 22.4 21 0.00088 16.4 0.8 22 78-99 12-36 (47) 133 2yti_A Zinc finger protein 347 22.4 23 0.00098 16.1 1.0 26 78-103 12-40 (46) 134 2kvf_A Zinc finger and BTB dom 22.3 17 0.00073 17.0 0.3 20 79-99 4-23 (28) 135 1f2i_G Fusion of N-terminal 17 22.1 27 0.0012 15.7 1.3 25 79-103 20-49 (73) 136 3abq_B Ethanolamine ammonia-ly 22.1 20 0.00084 16.6 0.6 92 22-140 4-95 (306) 137 2ytm_A Zinc finger protein 28 22.1 25 0.001 16.0 1.1 26 78-103 12-40 (46) 138 2eox_A Zinc finger protein 473 21.9 18 0.00074 16.9 0.3 27 76-102 10-39 (44) 139 2ytn_A Zinc finger protein 347 21.8 24 0.001 16.1 1.0 28 76-103 10-40 (46) 140 2fe3_A Peroxide operon regulat 21.8 43 0.0018 14.5 2.5 74 26-102 34-124 (145) 141 2eom_A ZFP-95, zinc finger pro 21.6 27 0.0011 15.7 1.2 27 77-103 11-40 (46) 142 2ytp_A Zinc finger protein 484 21.4 22 0.00091 16.4 0.7 27 77-103 11-40 (46) 143 2o03_A Probable zinc uptake re 21.4 44 0.0018 14.4 5.2 85 19-104 15-116 (131) 144 2qfa_A Baculoviral IAP repeat- 21.1 25 0.0011 15.9 0.9 31 75-111 51-81 (142) 145 3boq_A Transcriptional regulat 21.1 39 0.0016 14.7 1.9 22 91-112 35-56 (160) 146 2yrm_A B-cell lymphoma 6 prote 20.8 39 0.0017 14.7 1.9 27 75-101 7-36 (43) 147 2eq4_A Zinc finger protein 224 20.6 26 0.0011 15.8 0.9 27 77-103 11-40 (46) 148 2el4_A Zinc finger protein 268 20.5 25 0.0011 15.9 0.9 27 77-103 11-40 (46) 149 1lva_A Selenocysteine-specific 20.5 36 0.0015 14.9 1.6 32 86-117 202-233 (258) 150 2eov_A Zinc finger protein 484 20.3 35 0.0015 15.0 1.5 27 77-103 11-40 (46) 151 2eml_A Zinc finger protein 28 20.2 34 0.0014 15.1 1.5 27 77-103 11-40 (46) 152 1dtd_B Metallocarboxypeptidase 20.2 27 0.0011 15.7 0.9 13 74-86 7-19 (61) 153 2en7_A Zinc finger protein 268 20.2 25 0.001 16.0 0.7 25 77-101 11-38 (44) 154 2enf_A Zinc finger protein 347 20.1 25 0.001 16.0 0.7 26 78-103 12-40 (46) No 1 >2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens} Probab=100.00 E-value=4.5e-38 Score=264.03 Aligned_cols=85 Identities=60% Similarity=1.002 Sum_probs=80.4 Q ss_pred CCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC Q ss_conf 78545899857365138884597436100025899986743999899999727379883229999999999999819981 Q gi|254780783|r 59 VQPERLKPAVPIRKSIENGCLYCLEDGMQFKSLKRHLKTHHNMTPDEYRIKWNLASDYPMVSREYATTRSKLAKNMGLGR 138 (149) Q Consensus 59 ~~~~~~~PAv~i~kSi~~d~iiClecGk~~K~LkRHL~t~hgLtp~eYR~kwGLp~dyPlvAp~Ys~~Rs~~Ak~~GLg~ 138 (149) ++.+.+.|||+|++||++|+||||||||+||||+|||++.|||||+|||+|||||+|||||||+||++||++||++|||+ T Consensus 2 ~~~e~~~Pav~i~kSi~~d~iiClecGk~~k~LkRHL~~~hgltp~eYR~kwGlp~dyPlva~~ys~~Rs~~ak~~gLg~ 81 (87) T 2jsp_A 2 VNVEKQKPAVSVRKSVQDDHIVCLECGGSFKSLKRHLTTHHSMTPEEYREKWDLPVDYPMVAPAYAEARSRLAKEMGLGQ 81 (87) T ss_dssp CCSSCCBCCCCSSTTBCSSCEECTBTCCEESBHHHHHHHTTCSCHHHHHHHTTCGGGCCSBCTTTTTTTTTSSCCSSCSC T ss_pred CCCCCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCH T ss_conf 87566899988666468980587127830558999988871989999999809899985629999999999999837525 Q ss_pred CHHHH Q ss_conf 01005 Q gi|254780783|r 139 GRKKR 143 (149) Q Consensus 139 ~~rk~ 143 (149) ++++. T Consensus 82 kr~~~ 86 (87) T 2jsp_A 82 RRKAN 86 (87) T ss_dssp SSCCC T ss_pred HHHCC T ss_conf 33222 No 2 >3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli} Probab=80.19 E-value=0.5 Score=26.84 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=27.5 Q ss_pred CEEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHCCC Q ss_conf 459743610-00258999867439998999997273 Q gi|254780783|r 78 CLYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKWNL 112 (149) Q Consensus 78 ~iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kwGL 112 (149) .-|+.+||= ....+.|.....+|+||.+||.++.= T Consensus 75 ~~IA~~~Gf~~~s~f~r~Fk~~~G~tP~~yR~~~~~ 110 (120) T 3mkl_A 75 KRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 110 (120) T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHSSCHHHHHHHC-- T ss_pred HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHC T ss_conf 999999789988999999999999099999997661 No 3 >2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=77.92 E-value=0.66 Score=26.04 Aligned_cols=26 Identities=23% Similarity=0.419 Sum_probs=16.2 Q ss_pred CCCCEEECCCCH-HHH---HHHHHHHHHCCC Q ss_conf 888459743610-002---589998674399 Q gi|254780783|r 75 ENGCLYCLEDGM-QFK---SLKRHLKTHHNM 101 (149) Q Consensus 75 ~~d~iiClecGk-~~K---~LkRHL~t~hgL 101 (149) ......|=+||+ .|+ .|++|+.. |+- T Consensus 31 ~~~~~~C~~C~k~~f~~~~~l~~H~~~-h~~ 60 (96) T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHMEN-CKQ 60 (96) T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHHH-HCC T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHH-CCC T ss_conf 898979999993546399999999988-589 No 4 >2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Probab=74.62 E-value=1.1 Score=24.58 Aligned_cols=19 Identities=37% Similarity=0.551 Sum_probs=9.3 Q ss_pred EEECCCCHHHH---HHHHHHHH Q ss_conf 59743610002---58999867 Q gi|254780783|r 79 LYCLEDGMQFK---SLKRHLKT 97 (149) Q Consensus 79 iiClecGk~~K---~LkRHL~t 97 (149) -.|-+|||.|+ .|+||+++ T Consensus 75 y~C~~C~k~F~~~~~L~~H~r~ 96 (129) T 2wbt_A 75 FVCPLCLMPFSSSVSLKQHIRY 96 (129) T ss_dssp EECTTTCCEESSHHHHHHHHHH T ss_pred EECCCCCCCCCCHHHHHHHHEE T ss_conf 1889999871874461446230 No 5 >2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6 Probab=70.74 E-value=1.8 Score=23.33 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=25.1 Q ss_pred HCCCCCEEECCCCHHHH------HHHHHHHHHCCCCHHHHHHH Q ss_conf 13888459743610002------58999867439998999997 Q gi|254780783|r 73 SIENGCLYCLEDGMQFK------SLKRHLKTHHNMTPDEYRIK 109 (149) Q Consensus 73 Si~~d~iiClecGk~~K------~LkRHL~t~hgLtp~eYR~k 109 (149) .+....++|-.|++.|+ .|.|||...| |+||.+- T Consensus 24 ~~~~~~a~C~~C~~~~~~~g~Ts~L~~HL~~~H---~~e~~~~ 63 (73) T 2ct5_A 24 ILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNH---PEEFCEF 63 (73) T ss_dssp GGGSSCCEETTTTEECCCCSSTHHHHHHHHHSC---HHHHHHH T ss_pred CCCCCEEECCCCCCEEECCCCHHHHHHHHHHHC---HHHHHHH T ss_conf 357787888789987775888587999999989---9999998 No 6 >1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5 Probab=70.27 E-value=3.4 Score=21.51 Aligned_cols=49 Identities=22% Similarity=0.194 Sum_probs=36.4 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCHHHHHHHCCCCCCCCCC-CHHHHHH Q ss_conf 84597436100025---89998674399989999972737988322-9999999 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTPDEYRIKWNLASDYPMV-SREYATT 126 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp~eYR~kwGLp~dyPlv-Ap~Ys~~ 126 (149) ..++||-|-+.|.+ +-.|....|+.+-...+.++||-- |--+ =-||.++ T Consensus 14 ~~~~CLFCd~~f~s~~~~l~H~k~~H~FD~~~~~~~~~LDf-Y~~IKLINYIR~ 66 (121) T 1wir_A 14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEF-YGYIKLINFIRL 66 (121) T ss_dssp CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCH-HHHHHHHHHHHH T ss_pred CCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCC-CCEEEEEEEEEE T ss_conf 01335211883679999999988740999899998728871-046888987761 No 7 >1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A Probab=69.47 E-value=1.1 Score=24.54 Aligned_cols=16 Identities=31% Similarity=0.528 Sum_probs=13.3 Q ss_pred CCCCCEEECCCCHHHH Q ss_conf 3888459743610002 Q gi|254780783|r 74 IENGCLYCLEDGMQFK 89 (149) Q Consensus 74 i~~d~iiClecGk~~K 89 (149) +..|+.||+|||+.|. T Consensus 1 ~~~d~~~C~eC~~~~~ 16 (111) T 1d4u_A 1 MEFDYVICEECGKEFM 16 (111) T ss_dssp CCCCCEECTTTCCEES T ss_pred CCCCHHHHHHCCCHHH T ss_conf 9965178988289221 No 8 >3oio_A Transcriptional regulator (ARAC-type DNA-binding containing proteins); PSI-2, midwest center for structural genomics; 1.65A {Chromobacterium violaceum} Probab=65.59 E-value=1.9 Score=23.13 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=26.7 Q ss_pred EEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHCCCC Q ss_conf 59743610-002589998674399989999972737 Q gi|254780783|r 79 LYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKWNLA 113 (149) Q Consensus 79 iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kwGLp 113 (149) -|..+||= ....+.|.....+|+||.+||.+..-| T Consensus 77 ~IA~~~Gf~~~~~f~r~Fk~~~G~sP~~yR~~~~~p 112 (113) T 3oio_A 77 QIGLACGFSSGPHFSSTYRNHFNITPREERAQRAQP 112 (113) T ss_dssp HHHHHTTCSCHHHHHHHHHHHHSSCHHHHHHTTTCC T ss_pred HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC T ss_conf 999981999889999999999891999999760699 No 9 >3oou_A LIN2118 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; HET: BTB; 1.57A {Listeria innocua} Probab=65.28 E-value=1.7 Score=23.42 Aligned_cols=31 Identities=26% Similarity=0.421 Sum_probs=23.8 Q ss_pred EECCCCH-HHHHHHHHHHHHCCCCHHHHHHHC Q ss_conf 9743610-002589998674399989999972 Q gi|254780783|r 80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKW 110 (149) Q Consensus 80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~kw 110 (149) |+++||= ....+.|-....+|+||.+||.++ T Consensus 76 IA~~~Gf~~~s~F~~~Fk~~~g~tP~~yRk~~ 107 (108) T 3oou_A 76 IAGKSGYTDMAYFYRQFKKHTGETPNRYRKIH 107 (108) T ss_dssp HHHHTTCCCHHHHHHHHHHHHSSCHHHHHHHH T ss_pred HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHC T ss_conf 99992999889999999998890999999865 No 10 >2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=59.05 E-value=4.6 Score=20.63 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=22.9 Q ss_pred CCCHHHHCCC-CCEEECCCCHH-HH---HHHHHHHHHCC Q ss_conf 8573651388-84597436100-02---58999867439 Q gi|254780783|r 67 AVPIRKSIEN-GCLYCLEDGMQ-FK---SLKRHLKTHHN 100 (149) Q Consensus 67 Av~i~kSi~~-d~iiClecGk~-~K---~LkRHL~t~hg 100 (149) .....+.+.+ ..++|=+||+. |+ .|++|+...|. T Consensus 12 ~~~~~~~~~~~~~~~C~~C~k~~~~~~~~L~~H~~~~h~ 50 (98) T 2gqj_A 12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQK 50 (98) T ss_dssp CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHH T ss_pred HHHHHHHHCCCCCEECCCCCEEECCCHHHHHHHHHHHCC T ss_conf 230567633898989999997305589999999998628 No 11 >1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A 1eo0_A Probab=57.30 E-value=2.3 Score=22.63 Aligned_cols=18 Identities=17% Similarity=0.300 Sum_probs=7.9 Q ss_pred CHHHHHHHHHHHHHHHHH Q ss_conf 889999999999999995 Q gi|254780783|r 31 PMADIGSLITDVHSALQR 48 (149) Q Consensus 31 ~~~el~~lI~~v~~aL~~ 48 (149) +.++|-.+-..+...-.. T Consensus 57 ~~~~v~~~Ak~Li~~WK~ 74 (309) T 1pqv_S 57 TNVEISKLVKKMISSWKD 74 (309) T ss_pred CCHHHHHHHHHHHHHHHH T ss_conf 949999999999999999 No 12 >2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Probab=55.64 E-value=3.9 Score=21.10 Aligned_cols=26 Identities=31% Similarity=0.503 Sum_probs=20.7 Q ss_pred CEEECC--CCHHHH---HHHHHHHHHCCCCH Q ss_conf 459743--610002---58999867439998 Q gi|254780783|r 78 CLYCLE--DGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiCle--cGk~~K---~LkRHL~t~hgLtp 103 (149) --+|-+ |||.|+ .|++|.++.||-.| T Consensus 17 ~~~C~~~~C~k~F~~~~~L~~H~~~h~~~~~ 47 (72) T 2epa_A 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKP 47 (72) T ss_dssp CEECSSTTTCCEESSHHHHHHHHHHHSSSCS T ss_pred CEECCCCCCCCEECCHHHHHHHHHHCCCCCC T ss_conf 9689899999876999999878651069978 No 13 >3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor} Probab=54.72 E-value=12 Score=17.90 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=41.0 Q ss_pred HCCCCCHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHH-------H Q ss_conf 36888889999999---------9999999950266666555785458998573651388845974361000-------2 Q gi|254780783|r 26 SNHVVPMADIGSLI---------TDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQF-------K 89 (149) Q Consensus 26 s~n~v~~~el~~lI---------~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~-------K 89 (149) ++...+++||-..+ .+||.+|..|....-.-....... ...-.....-...++||..||+-+ . T Consensus 30 ~~~~~ta~ei~~~l~~~~~~i~~~TVYR~L~~L~~~Glv~~i~~~~~-~~~y~~~~~~~H~hliC~~Cg~v~~i~~~~~~ 108 (145) T 3eyy_A 30 TLEHATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAHLGHG-APTYHLADRHHHIHLVCRDCTNVIEADLSVAA 108 (145) T ss_dssp HHSSBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEEEECGGG-CEEEEETTSCCSEEEEESSSSCEEEECGGGGH T ss_pred HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCC-CEEECCCCCCCCCEEEECCCCCEEECCCHHHH T ss_conf 37998999999999975888765899999999998650577652899-35631479988457999999998982635888 Q ss_pred HHHHHHHHHCCCCH Q ss_conf 58999867439998 Q gi|254780783|r 90 SLKRHLKTHHNMTP 103 (149) Q Consensus 90 ~LkRHL~t~hgLtp 103 (149) .+.+++...+|... T Consensus 109 ~~~~~i~~~~Gf~i 122 (145) T 3eyy_A 109 DFTAKLREQFGFDT 122 (145) T ss_dssp HHHHHHHHHTCEEE T ss_pred HHHHHHHHHCCCEE T ss_conf 99999999719989 No 14 >1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D Probab=52.91 E-value=5.1 Score=20.36 Aligned_cols=18 Identities=33% Similarity=0.713 Sum_probs=16.9 Q ss_pred CCCCHHHHHHHCCCCCCC Q ss_conf 399989999972737988 Q gi|254780783|r 99 HNMTPDEYRIKWNLASDY 116 (149) Q Consensus 99 hgLtp~eYR~kwGLp~dy 116 (149) -|.||+|-|+.||++.|| T Consensus 122 ~gKt~eEiR~~f~I~~D~ 139 (141) T 1fs1_B 122 KGKTPEEIRKTFNIKNDF 139 (141) T ss_dssp TTCCHHHHHHHTC----- T ss_pred CCCCHHHHHHHHCCCCCC T ss_conf 599999999993999889 No 15 >3mn2_A Probable ARAC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 1.80A {Rhodopseudomonas palustris} Probab=51.47 E-value=4.4 Score=20.75 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=23.4 Q ss_pred EECCCCH-HHHHHHHHHHHHCCCCHHHHHHHC Q ss_conf 9743610-002589998674399989999972 Q gi|254780783|r 80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKW 110 (149) Q Consensus 80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~kw 110 (149) |+..||= ....+.|.-...+|+||.+||.++ T Consensus 75 Ia~~~Gf~~~s~F~r~Fk~~~G~sP~~~rk~~ 106 (108) T 3mn2_A 75 AALSCGFSNLGHFARDYRDMFGEKPSETLQRA 106 (108) T ss_dssp HHHHTTCCCHHHHHHHHHHHHSSCHHHHHHHT T ss_pred HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHH T ss_conf 99992899889999999998891999999763 No 16 >2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* Probab=49.34 E-value=8.3 Score=19.01 Aligned_cols=19 Identities=32% Similarity=0.704 Sum_probs=17.3 Q ss_pred CCCCHHHHHHHCCCCCCCC Q ss_conf 3999899999727379883 Q gi|254780783|r 99 HNMTPDEYRIKWNLASDYP 117 (149) Q Consensus 99 hgLtp~eYR~kwGLp~dyP 117 (149) -|.||+|-|+.||++.||. T Consensus 126 kgKt~eeiR~~fgI~~D~T 144 (160) T 2p1m_A 126 KGKTPEEIRTTFNIKNDFT 144 (160) T ss_dssp TTCCHHHHHHHTTCCCCCC T ss_pred CCCCHHHHHHHHCCCCCCC T ss_conf 5999999999929998898 No 17 >1bl0_A Protein (multiple antibiotic resistance protein), DNA (5'- D(*CP*CP*GP*AP*TP*GP*CP*CP*AP*CP*GP*TP*TP*TP*TP*GP*CP*TP*AP *AP*AP*TP* CP*C)-3')...; transcriptional activator; HET: DNA; 2.30A {Escherichia coli} SCOP: a.4.1.8 a.4.1.8 PDB: 1xs9_A Probab=47.42 E-value=5.2 Score=20.29 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=25.3 Q ss_pred EEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHCCC Q ss_conf 59743610-00258999867439998999997273 Q gi|254780783|r 79 LYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKWNL 112 (149) Q Consensus 79 iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kwGL 112 (149) -|+.+||= ..-.+.|.....+|+||.+||..-.. T Consensus 81 ~IA~~~Gf~~~s~F~r~Fk~~~G~tP~~yR~~~~~ 115 (129) T 1bl0_A 81 YLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQ 115 (129) T ss_dssp HHHHHTTCSCHHHHHHHHHHHHSSCHHHHHTCSSC T ss_pred HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCC T ss_conf 99999689987899999999989099999986677 No 18 >1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Probab=47.39 E-value=6.9 Score=19.54 Aligned_cols=24 Identities=46% Similarity=0.497 Sum_probs=13.2 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCC Q ss_conf 84597436100025---8999867439 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHN 100 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hg 100 (149) ....|-+||+.|++ |.+|....|+ T Consensus 68 ~~~~C~~C~~~F~~~~~L~~H~~~~H~ 94 (107) T 1wjp_A 68 KKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107) T ss_dssp GGGEEGGGTEECSSHHHHHHHHHHTSC T ss_pred CCCCCCCCCCEECCHHHHHHHHHHHCC T ss_conf 998789979786997999999998868 No 19 >3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, cytoplasm, binding, transcription; HET: PAM; 1.90A {Vibrio cholerae O395} Probab=47.27 E-value=5.5 Score=20.14 Aligned_cols=31 Identities=19% Similarity=0.105 Sum_probs=18.7 Q ss_pred EECCCCHHHHHHHHHHHHHCCCCHHHHHHHCC Q ss_conf 97436100025899986743999899999727 Q gi|254780783|r 80 YCLEDGMQFKSLKRHLKTHHNMTPDEYRIKWN 111 (149) Q Consensus 80 iClecGk~~K~LkRHL~t~hgLtp~eYR~kwG 111 (149) +|-.+|-.-..|.|.+. ..|+||-+|..++= T Consensus 191 lA~~~~~S~~~l~r~fK-~~g~s~~~yi~~~R 221 (276) T 3gbg_A 191 ICGELRTNRMILKKELE-SRGVKFRELINSIR 221 (276) T ss_dssp HHHHHTCCHHHHHHHHH-TTTCCHHHHHHHHH T ss_pred HHHHHCCCHHHHHHHHH-HHCCCHHHHHHHHH T ss_conf 99997989999999999-96988999999999 No 20 >2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=46.94 E-value=4.8 Score=20.54 Aligned_cols=27 Identities=30% Similarity=0.504 Sum_probs=20.3 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) ..--|-+|||.|. .|++|.++.-|-.| T Consensus 11 ~~YkC~~CgK~F~~~s~L~~H~riHTGEKP 40 (46) T 2em5_A 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHHTTTSCSCC T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 626889798888885785665566589889 No 21 >2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Probab=46.46 E-value=5.2 Score=20.30 Aligned_cols=23 Identities=17% Similarity=0.111 Sum_probs=12.5 Q ss_pred CEEECCCCHHHHH---HHHHHHHHCC Q ss_conf 4597436100025---8999867439 Q gi|254780783|r 78 CLYCLEDGMQFKS---LKRHLKTHHN 100 (149) Q Consensus 78 ~iiClecGk~~K~---LkRHL~t~hg 100 (149) --.|-.||+.|.+ |.+|+.+.|. T Consensus 25 ~~~c~~C~k~F~~~~~L~~H~~~~H~ 50 (95) T 2ej4_A 25 SRPKKSCDRTFSTMHELVTHVTMEHV 50 (95) T ss_dssp SSSCCCCCCCCSSHHHHHHHHHHTTT T ss_pred CCCCCCCCCEECCHHHHHHHHHHHCC T ss_conf 98899879982988999997086556 No 22 >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 Probab=46.38 E-value=3.4 Score=21.53 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=27.3 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHH-HH Q ss_conf 999999999995026666655578545899857365138884597436100025899-98 Q gi|254780783|r 37 SLITDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQFKSLKR-HL 95 (149) Q Consensus 37 ~lI~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~K~LkR-HL 95 (149) .+|.++|..|..=+- ..++..+.....++..+ +--.+.=.|.+||++|.+++| |+ T Consensus 124 ~~i~~~Y~~Lk~~G~--~FP~~~~~~~~~~~~~~--p~w~~~~~C~~C~~~F~~~~r~~~ 179 (220) T 1dvp_A 124 QAIKDTMTILKAKGH--TFPELREADAMFTADTA--PNWADGRVCHRCRVEFTFTNRKHH 179 (220) T ss_dssp CHHHHHHHHHHHTTC--CCCCCCC---CCCCSCC--CCCCCCSBCTTTCCBCCSSSCCEE T ss_pred HHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 699999999997676--78978753200002242--225678857678981117653716 No 23 >2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=45.14 E-value=6.9 Score=19.52 Aligned_cols=27 Identities=37% Similarity=0.554 Sum_probs=20.3 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|.+|.+..-|-.| T Consensus 11 KPy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2em4_A 11 RPYECIECGKAFKTKSSLICHRRSHTGEKP 40 (46) T ss_dssp SSEECSSSCCEESSHHHHHHHHHHHSSSSC T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 795789888874866787887146389889 No 24 >2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Probab=43.80 E-value=5.7 Score=20.06 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=9.1 Q ss_pred EEECCCCHHHH---HHHHHHHHHC Q ss_conf 59743610002---5899986743 Q gi|254780783|r 79 LYCLEDGMQFK---SLKRHLKTHH 99 (149) Q Consensus 79 iiClecGk~~K---~LkRHL~t~h 99 (149) ..|-+||+.|. .|.+|+...| T Consensus 31 ~~C~~C~~~F~~~~~l~~H~~~~H 54 (60) T 2adr_A 31 YPCGLCNRAFTRRDLLIRHAQKIH 54 (60) T ss_dssp EECTTTCCEESSHHHHHHHHTTTS T ss_pred EECCCCCCEECCHHHHHHHCCCCC T ss_conf 478989899488899997592657 No 25 >2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=43.74 E-value=7.7 Score=19.22 Aligned_cols=28 Identities=29% Similarity=0.462 Sum_probs=20.3 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.++.-|-.| T Consensus 10 ekpy~C~~CgK~F~~~s~L~~H~r~HtgekP 40 (46) T 2emi_A 10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKP 40 (46) T ss_dssp CCCEECSSSCCEESSHHHHHHHHGGGCSCCC T ss_pred CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 9892899999874867886776546189789 No 26 >1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42 Probab=43.51 E-value=18 Score=16.79 Aligned_cols=86 Identities=10% Similarity=0.145 Sum_probs=45.5 Q ss_pred HHHHHHHHHHC-C-CCCHHHHHHHHH---------HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCC Q ss_conf 99999999736-8-888899999999---------999999950266666555785458998573651388845974361 Q gi|254780783|r 17 TVDIVAAYVSN-H-VVPMADIGSLIT---------DVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDG 85 (149) Q Consensus 17 ta~IV~A~vs~-n-~v~~~el~~lI~---------~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecG 85 (149) =..|.....+. . .++++||-..+. +||.+|..|.............. .--......-...+++|..|| T Consensus 20 R~~Il~~L~~~~~~h~sa~eI~~~l~~~~~~i~~~TVYR~L~~L~e~gli~~~~~~~~-~~~~~~~~~~hh~HliC~~Cg 98 (136) T 1mzb_A 20 RVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGG-HAVFELADSGHHDHMVCVDTG 98 (136) T ss_dssp HHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEECSSSS-SCEEEESSSCCCEEEEETTTC T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCC-EEEEECCCCCCCCEEEECCCC T ss_conf 9999999985899999999999999976889888999999999996891899993898-189965899988889999999 Q ss_pred HHH-------HHHHHHHHHHCCCCH Q ss_conf 000-------258999867439998 Q gi|254780783|r 86 MQF-------KSLKRHLKTHHNMTP 103 (149) Q Consensus 86 k~~-------K~LkRHL~t~hgLtp 103 (149) +-. ..+.+.+...+|.+. T Consensus 99 ~i~~~~~~~~~~~~~~~~~~~gf~i 123 (136) T 1mzb_A 99 EVIEFMDAEIEKRQKEIVRERGFEL 123 (136) T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCC T ss_pred CEEEECCCCHHHHHHHHHHHCCCEE T ss_conf 9998458459999998799769989 No 27 >2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=42.90 E-value=5.9 Score=19.98 Aligned_cols=27 Identities=33% Similarity=0.529 Sum_probs=18.9 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.+..-|-.| T Consensus 10 kpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 39 (42) T 2eos_A 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGP 39 (42) T ss_dssp CCBCCSSSCCCBSSHHHHHHHTTTTSCCSS T ss_pred CCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 897589889840788999998230389898 No 28 >2k9s_A Arabinose operon regulatory protein; activator, arabinose catabolism, carbohydrate metabolism, cytoplasm, DNA-binding, repressor, transcription; NMR {Escherichia coli} Probab=42.53 E-value=6.8 Score=19.56 Aligned_cols=96 Identities=11% Similarity=0.119 Sum_probs=44.3 Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCC-CCHHHHCCCCCEEECCCCH- Q ss_conf 999999999999736888889999999999999995026----6666555785458998-5736513888459743610- Q gi|254780783|r 13 FLEMTVDIVAAYVSNHVVPMADIGSLITDVHSALQRVVS----RAPCQDNVQPERLKPA-VPIRKSIENGCLYCLEDGM- 86 (149) Q Consensus 13 l~~lta~IV~A~vs~n~v~~~el~~lI~~v~~aL~~l~~----~~~~~~~~~~~~~~PA-v~i~kSi~~d~iiClecGk- 86 (149) .+..+.+.+..+.++..++.++|...+.--...|..+=. -.+.. --..-...-| -.+..+-.+-.=|+++||= T Consensus 4 ri~~~~~~i~~~~~~~~~~l~~lA~~~~~s~~~l~r~fk~~~g~s~~~-~i~~~Rl~~a~~lL~~~~~si~~IA~~~Gf~ 82 (107) T 2k9s_A 4 RVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLS-WREDQRISQAKLLLSTTRMPIATVGRNVGFD 82 (107) T ss_dssp HHHHHHHHHHHTSSCSSCCHHHHHHHTTSCHHHHHHHHHHHHSSCHHH-HHHHHHHHHHHHHHHHCCCCHHHHHHHTTCC T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC T ss_conf 999999999975679997999999998929999999999998919899-9988899989898866683185799984999 Q ss_pred HHHHHHHHHHHHCCCCHHHHHHH Q ss_conf 00258999867439998999997 Q gi|254780783|r 87 QFKSLKRHLKTHHNMTPDEYRIK 109 (149) Q Consensus 87 ~~K~LkRHL~t~hgLtp~eYR~k 109 (149) ..-.+.|.....+|+||.+||.. T Consensus 83 ~~~~f~r~Fk~~~G~tP~~yR~~ 105 (107) T 2k9s_A 83 DQLYFSRVFKKCTGASPSEFRAG 105 (107) T ss_dssp CHHHHHHHHHHHHSSCHHHHHHT T ss_pred CHHHHHHHHHHHHCCCHHHHHHC T ss_conf 88999999999889099999704 No 29 >2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle/ligase/protein turnover complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A* Probab=42.39 E-value=12 Score=17.91 Aligned_cols=19 Identities=32% Similarity=0.677 Sum_probs=17.4 Q ss_pred CCCCHHHHHHHCCCCCCCC Q ss_conf 3999899999727379883 Q gi|254780783|r 99 HNMTPDEYRIKWNLASDYP 117 (149) Q Consensus 99 hgLtp~eYR~kwGLp~dyP 117 (149) -|.||+|-|..||++.|+. T Consensus 127 ~gks~eeir~~f~i~~d~t 145 (159) T 2ast_A 127 KGKTPEEIRKTFNIKNDFT 145 (159) T ss_dssp SSCCHHHHHHHTTCCCCSC T ss_pred CCCCHHHHHHHHCCCCCCC T ss_conf 4999999999829899999 No 30 >2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Probab=40.36 E-value=9.5 Score=18.62 Aligned_cols=25 Identities=28% Similarity=0.463 Sum_probs=18.6 Q ss_pred CCCEEEC--CCCHHHH---HHHHHHHHHCC Q ss_conf 8845974--3610002---58999867439 Q gi|254780783|r 76 NGCLYCL--EDGMQFK---SLKRHLKTHHN 100 (149) Q Consensus 76 ~d~iiCl--ecGk~~K---~LkRHL~t~hg 100 (149) ++-..|- +||+.|. .|++|+++.|| T Consensus 126 ~~p~~C~c~~C~k~F~~~~~L~~H~~~hHG 155 (155) T 2gli_A 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155) T ss_dssp CCCEECCSTTTCCEESSHHHHHHHHHHSCC T ss_pred CCCEECCCCCCCCEECCHHHHHHHCCCCCC T ss_conf 888377689989980988999961815749 No 31 >3mks_A Suppressor of kinetochore protein 1; ubiquitin ligase, protein binding, small molecule complex, ligase/cell cycle; HET: C1C; 2.60A {Saccharomyces cerevisiae} PDB: 1nex_A* Probab=40.36 E-value=13 Score=17.82 Aligned_cols=19 Identities=26% Similarity=0.658 Sum_probs=17.4 Q ss_pred CCCCHHHHHHHCCCCCCCC Q ss_conf 3999899999727379883 Q gi|254780783|r 99 HNMTPDEYRIKWNLASDYP 117 (149) Q Consensus 99 hgLtp~eYR~kwGLp~dyP 117 (149) -|.||+|-|+.||++.||. T Consensus 134 kgkt~eeiR~~f~i~~d~t 152 (169) T 3mks_A 134 RGRSPEEIRRTFNIVNDFT 152 (169) T ss_dssp TTCCHHHHHHHHTCCCCCC T ss_pred CCCCHHHHHHHHCCCCCCC T ss_conf 4999999999929999999 No 32 >2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Probab=39.74 E-value=9.4 Score=18.66 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=20.4 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|=+|||.|. .|++|.++.-|-.| T Consensus 10 eKpy~C~~Cgk~F~~~s~L~~H~riHtgEKP 40 (46) T 2el6_A 10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKP 40 (46) T ss_dssp CCSEECSSSSCEESSHHHHHHHHGGGCCSSC T ss_pred CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 9797899989985888899998120489689 No 33 >2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=39.05 E-value=9.5 Score=18.65 Aligned_cols=26 Identities=27% Similarity=0.447 Sum_probs=18.8 Q ss_pred CEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 4597436100025---8999867439998 Q gi|254780783|r 78 CLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) --.|-+|||.|.. |.+|+++.-|-.| T Consensus 12 py~C~~CgK~F~~~s~L~~H~r~HtgeKP 40 (46) T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRIHTGENP 40 (46) T ss_dssp SSCCSSSCCCCSSHHHHHHHHGGGSSSCC T ss_pred CEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 96899999962878999998024289999 No 34 >2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=38.79 E-value=12 Score=17.91 Aligned_cols=27 Identities=30% Similarity=0.482 Sum_probs=19.3 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2eoe_A 11 KPYKCNECGKVFTQNSHLANHQRIHTGVKP 40 (46) T ss_dssp CSSEETTTTEECSSHHHHHHHHGGGSCCCS T ss_pred CCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 793889999996888999998200088979 No 35 >2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Probab=37.52 E-value=10 Score=18.42 Aligned_cols=27 Identities=30% Similarity=0.531 Sum_probs=19.7 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.+..-|-.| T Consensus 11 kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2em9_A 11 KPYNCKECGKSFRWASCLLKHQRVHSGEKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHGGGGTSCCC T ss_pred CCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 896789879970888999998012088989 No 36 >2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=36.97 E-value=13 Score=17.80 Aligned_cols=28 Identities=32% Similarity=0.465 Sum_probs=20.5 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 EKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 40 (46) T 2en6_A 10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKP 40 (46) T ss_dssp SCCEEETTTTEEESSHHHHHHHHHHHSSCCC T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 9897998989977788999998301289889 No 37 >2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Probab=36.67 E-value=13 Score=17.82 Aligned_cols=22 Identities=23% Similarity=0.295 Sum_probs=10.4 Q ss_pred EEECCCCHHHH---HHHHHHHHHCC Q ss_conf 59743610002---58999867439 Q gi|254780783|r 79 LYCLEDGMQFK---SLKRHLKTHHN 100 (149) Q Consensus 79 iiClecGk~~K---~LkRHL~t~hg 100 (149) -.|-+|||.|. .|++|+++.|. T Consensus 41 ~~C~~C~k~F~~~~~L~~H~~~~H~ 65 (66) T 2drp_A 41 YPCPFCFKEFTRKDNMTAHVKIIHK 65 (66) T ss_dssp EECTTTCCEESCHHHHHHHHHHHTC T ss_pred EECCCCCCEECCHHHHHHHHHCCCC T ss_conf 0898989980898899886260389 No 38 >2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=36.01 E-value=10 Score=18.47 Aligned_cols=27 Identities=33% Similarity=0.460 Sum_probs=20.0 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|+++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgeKP 40 (46) T 2ytq_A 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40 (46) T ss_dssp CSCBCSSSCCBCSCHHHHHHHHTTTCCSCS T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 996899989856778999998034289889 No 39 >2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=35.76 E-value=9.1 Score=18.75 Aligned_cols=21 Identities=38% Similarity=0.431 Sum_probs=15.2 Q ss_pred CCCEEECCCCHHHHH---HHHHHH Q ss_conf 884597436100025---899986 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLK 96 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~ 96 (149) ...-.|=.|||+||+ ||-|-+ T Consensus 7 ~k~hlcdlcgkkfksk~tlkshkl 30 (36) T 2elr_A 7 GKTHLCDMCGKKFKSKGTLKSHKL 30 (36) T ss_dssp CSSCBCTTTCCBCSSHHHHHHHHH T ss_pred CCCCHHHHHHHHHHCCEEEEEEEE T ss_conf 762158766034404413130010 No 40 >2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=35.69 E-value=12 Score=17.88 Aligned_cols=28 Identities=25% Similarity=0.249 Sum_probs=19.7 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.++.-|-.| T Consensus 8 eKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 38 (44) T 2emx_A 8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP 38 (44) T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHHTSSCS T ss_pred CCCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 9897899989873877899998152288989 No 41 >2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=35.60 E-value=11 Score=18.16 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=15.2 Q ss_pred EEECCCCHHHHH---HHHHHHHHCC Q ss_conf 597436100025---8999867439 Q gi|254780783|r 79 LYCLEDGMQFKS---LKRHLKTHHN 100 (149) Q Consensus 79 iiClecGk~~K~---LkRHL~t~hg 100 (149) ..|-+||+.|+. |++|+...|. T Consensus 39 ~~C~~C~~~f~~~~~L~~H~~~~H~ 63 (78) T 2d9h_A 39 FPCEFCGKRFEKPDSVAAHRSKSHP 63 (78) T ss_dssp EECTTTCCEESSHHHHHHHHHHTST T ss_pred EECCCCCCEECCHHHHHHHHHHHCC T ss_conf 4639979940799999999998793 No 42 >2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=35.40 E-value=11 Score=18.11 Aligned_cols=27 Identities=26% Similarity=0.359 Sum_probs=19.9 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|=+|||.|. .|++|.++.-|..| T Consensus 11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgeKP 40 (46) T 2ep2_A 11 KPYECSICGKSFTKKSQLHVHQQIHTGEKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHHHTTSSCCS T ss_pred CCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 696789879970877899987233089899 No 43 >1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Probab=35.30 E-value=10 Score=18.36 Aligned_cols=22 Identities=36% Similarity=0.599 Sum_probs=16.4 Q ss_pred EEECCCCHHHHH---HHHHHHHHCC Q ss_conf 597436100025---8999867439 Q gi|254780783|r 79 LYCLEDGMQFKS---LKRHLKTHHN 100 (149) Q Consensus 79 iiClecGk~~K~---LkRHL~t~hg 100 (149) -.|=+|||.|.. |+||.++.-| T Consensus 3 ~~C~~C~k~F~~~~~L~~H~r~HTg 27 (29) T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRSHTN 27 (29) T ss_dssp CBCTTTCCBCSSHHHHHHHHHHHSC T ss_pred CCCCCCCCCCCCHHHHCCCCCCCCC T ss_conf 3688987998770582211165026 No 44 >2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=34.97 E-value=13 Score=17.69 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=19.9 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+||+.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~C~k~F~~~~~L~~H~r~HtgeKP 40 (46) T 2yto_A 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERH 40 (46) T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHTCCCB T ss_pred CCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 895889998970875899988167188888 No 45 >2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=34.76 E-value=11 Score=18.27 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=19.1 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCC Q ss_conf 884597436100025---899986743999 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMT 102 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLt 102 (149) +.--.|-+|||.|.. |++|.++.-|-+ T Consensus 10 Ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE~ 39 (44) T 2emb_A 10 RKRYECSKCQATFNLRKHLIQHQKTHAAKS 39 (44) T ss_dssp CSSEECTTTCCEESCHHHHHHHGGGGCCCC T ss_pred CCCEECCCCCCCCCCHHHHHHHCCCCCCCC T ss_conf 869678999895587799999803268989 No 46 >2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Probab=34.70 E-value=9.5 Score=18.63 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=19.9 Q ss_pred CCCCEEECCCCHHHHH---HHHHHHHHCCCC Q ss_conf 8884597436100025---899986743999 Q gi|254780783|r 75 ENGCLYCLEDGMQFKS---LKRHLKTHHNMT 102 (149) Q Consensus 75 ~~d~iiClecGk~~K~---LkRHL~t~hgLt 102 (149) .+....|=+|||.|.. |++|++..|+-. T Consensus 22 ~~~~~~C~~C~k~F~~~~~L~~H~~~hH~~~ 52 (155) T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGG 52 (155) T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCC T ss_pred CCCCCCCCCCCCHHCCHHHHHHHHHHHCCCC T ss_conf 9989788666741199999999724444899 No 47 >2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Probab=34.57 E-value=19 Score=16.66 Aligned_cols=26 Identities=35% Similarity=0.529 Sum_probs=18.3 Q ss_pred EEEC--CCCHHHH---HHHHHHHHHCCCCHH Q ss_conf 5974--3610002---589998674399989 Q gi|254780783|r 79 LYCL--EDGMQFK---SLKRHLKTHHNMTPD 104 (149) Q Consensus 79 iiCl--ecGk~~K---~LkRHL~t~hgLtp~ 104 (149) -+|= .|||.|. .|++|++..++-.|- T Consensus 16 ~~C~~p~C~k~F~~~~~L~~H~r~H~~~~~~ 46 (100) T 2ebt_A 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPY 46 (100) T ss_dssp EECCSSSCCCEESCHHHHHHHHHHHSCCCCE T ss_pred EECCCCCCCCEECCHHHHHHHHHHHCCCCCC T ss_conf 7898999989869999999998860899881 No 48 >2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=34.43 E-value=8.7 Score=18.87 Aligned_cols=28 Identities=39% Similarity=0.702 Sum_probs=19.9 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|=+|||.|. .|++|.++.-|-.| T Consensus 10 ekpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2en3_A 10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDP 40 (46) T ss_dssp CCSEECSSSCCEESSSHHHHHHHHHHHHSCC T ss_pred CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 9896899999988768899998015499588 No 49 >2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Probab=34.30 E-value=11 Score=18.16 Aligned_cols=17 Identities=18% Similarity=0.341 Sum_probs=6.9 Q ss_pred ECCCCHHHHHHHHHHHH Q ss_conf 74361000258999867 Q gi|254780783|r 81 CLEDGMQFKSLKRHLKT 97 (149) Q Consensus 81 ClecGk~~K~LkRHL~t 97 (149) |-.||+.|..|++|++. T Consensus 67 C~~~~k~~~~l~~H~~~ 83 (85) T 2j7j_A 67 CSFVGKTWTLYLKHVAE 83 (85) T ss_dssp CCCEESSHHHHHHHHHH T ss_pred CCCCCCCHHHHHHHHHH T ss_conf 89878619999999874 No 50 >2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=34.25 E-value=14 Score=17.59 Aligned_cols=21 Identities=24% Similarity=0.453 Sum_probs=9.8 Q ss_pred EEECCCCHHHH---HHHHHHHHHC Q ss_conf 59743610002---5899986743 Q gi|254780783|r 79 LYCLEDGMQFK---SLKRHLKTHH 99 (149) Q Consensus 79 iiClecGk~~K---~LkRHL~t~h 99 (149) -.|-.||+.|. .|++|+...| T Consensus 16 y~C~~C~~~f~~~~~l~~H~~~~h 39 (77) T 2ct1_A 16 YECYICHARFTQSGTMKMHILQKH 39 (77) T ss_dssp EECTTTCCEESCHHHHHHHHHHHS T ss_pred CCCCCCCCCCCCHHHHHHEEEEEE T ss_conf 089799970140575432166430 No 51 >2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Probab=34.20 E-value=15 Score=17.37 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=19.2 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCC Q ss_conf 884597436100025---899986743999 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMT 102 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLt 102 (149) +.--.|-+|||.|.. |++|.++.-|-. T Consensus 10 eKpy~C~~CgK~F~~~s~L~~H~~~HtgeK 39 (48) T 2epr_A 10 RKQVACEICGKIFRDVYHLNRHKLSHSGEK 39 (48) T ss_dssp CCSEEETTTTEEESSHHHHHHHGGGSCSCC T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCC T ss_conf 968288989977487689899833138998 No 52 >2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Probab=34.18 E-value=16 Score=17.18 Aligned_cols=28 Identities=21% Similarity=0.438 Sum_probs=19.9 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +..-.|-+|||.|. .|++|.++.-|-.| T Consensus 8 eKpy~C~~Cgk~F~~~s~L~~H~r~HtG~k~ 38 (45) T 2epq_A 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 38 (45) T ss_dssp CCSSEETTTTEECSCHHHHHHHHHHHSCCCC T ss_pred CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 9796899899806678999998053798989 No 53 >2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=33.84 E-value=12 Score=17.90 Aligned_cols=27 Identities=30% Similarity=0.257 Sum_probs=19.0 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|.+|.+..-|-.| T Consensus 11 kpy~C~~CgK~F~~~s~L~~H~riHtgeKP 40 (46) T 2yso_A 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKN 40 (46) T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHSCCSC T ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 882889998977745878998327499888 No 54 >3lsg_A Two-component response regulator YESN; structural genomics, PSI-2, protein structure initiative, MCSG; 2.05A {Fusobacterium nucleatum} Probab=33.82 E-value=8.3 Score=19.01 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=21.4 Q ss_pred EECCCCH-HHHHHHHHHHHHCCCCHHHHHH Q ss_conf 9743610-0025899986743999899999 Q gi|254780783|r 80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRI 108 (149) Q Consensus 80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~ 108 (149) |+.+||= ..-.+.|......|+||.+||+ T Consensus 74 IA~~~Gf~~~~~f~r~Fk~~~G~sP~~yRk 103 (103) T 3lsg_A 74 IAEQVGFEDVNYFITKFKKYYQITPKQYRE 103 (103) T ss_dssp HHHHTTCSCHHHHHHHHHHHHSSCHHHHTC T ss_pred HHHHHHCCCHHHHHHHHHHHHCCCHHHHCC T ss_conf 999985799899999999998909999809 No 55 >2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=33.47 E-value=11 Score=18.13 Aligned_cols=28 Identities=25% Similarity=0.331 Sum_probs=19.9 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.++.-|-.| T Consensus 10 ekpy~C~~C~K~F~~~s~L~~H~r~HtgeKP 40 (46) T 2enh_A 10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40 (46) T ss_dssp SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC T ss_pred CCCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 8895889869970867897886455289879 No 56 >2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Probab=33.34 E-value=14 Score=17.47 Aligned_cols=26 Identities=35% Similarity=0.558 Sum_probs=19.6 Q ss_pred CEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 459743610002---58999867439998 Q gi|254780783|r 78 CLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) --.|-+|||.|. .|++|++..-|-.| T Consensus 12 py~C~~Cgk~F~~~~~L~~H~riHtgeKP 40 (46) T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKLHTGEKP 40 (46) T ss_dssp SBCCSSSCCCBSSTTHHHHHHHHHSCCSS T ss_pred CEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 92889999953778999998014189889 No 57 >2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=33.27 E-value=13 Score=17.75 Aligned_cols=27 Identities=30% Similarity=0.300 Sum_probs=19.1 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2epw_A 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKH 40 (46) T ss_dssp CSEECSSSCCEESSSHHHHHHHHHCCSCCC T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 694899999683876999998135599888 No 58 >2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1 Probab=33.18 E-value=12 Score=17.90 Aligned_cols=12 Identities=17% Similarity=0.232 Sum_probs=9.9 Q ss_pred HHHHHHCCCCCC Q ss_conf 999997273798 Q gi|254780783|r 104 DEYRIKWNLASD 115 (149) Q Consensus 104 ~eYR~kwGLp~d 115 (149) .+|++|||+|-= T Consensus 105 ~~Y~~kFGfpFI 116 (165) T 2o8i_A 105 SAYTEKFGFPFI 116 (165) T ss_dssp HHHHHHHSSCCC T ss_pred HHHHHHCCCEEE T ss_conf 999997599059 No 59 >2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=33.02 E-value=14 Score=17.54 Aligned_cols=28 Identities=29% Similarity=0.312 Sum_probs=20.4 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.++.-|-.| T Consensus 10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtGe~p 40 (44) T 2epv_A 10 EKPYECNECGKAFIWKSLLIVHERTHAGVSG 40 (44) T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGSSCSC T ss_pred CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 9896789989881877787876566388598 No 60 >2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Probab=32.54 E-value=13 Score=17.67 Aligned_cols=27 Identities=22% Similarity=0.354 Sum_probs=19.1 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |.+|.++.-|-.| T Consensus 10 KPy~C~~CgK~F~~~~~L~~H~r~HtgEKP 39 (42) T 2epc_A 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39 (42) T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTTCCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 898889999846767898898005389888 No 61 >2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Probab=32.50 E-value=14 Score=17.54 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=19.4 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.++.-|-.| T Consensus 9 kpy~C~~Cgk~F~~~s~L~~H~r~HTgE~~ 38 (42) T 2el5_A 9 NPYECSECGKAFNRKDQLISHQRTHAGESG 38 (42) T ss_dssp CSEECSSSCCEESSHHHHHHHHGGGCCCCS T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 798799879980775899987423389989 No 62 >2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=32.50 E-value=11 Score=18.21 Aligned_cols=28 Identities=32% Similarity=0.397 Sum_probs=19.4 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 Ekpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 40 (46) T 2eoo_A 10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKS 40 (46) T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHSTTS T ss_pred CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 9797899889985878899998137599798 No 63 >2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=32.37 E-value=16 Score=17.18 Aligned_cols=28 Identities=32% Similarity=0.574 Sum_probs=20.2 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.++.-|-.| T Consensus 10 EKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2em2_A 10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKP 40 (46) T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHCCCCS T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 9897999989963877999998140399888 No 64 >2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=32.35 E-value=12 Score=18.05 Aligned_cols=25 Identities=24% Similarity=0.308 Sum_probs=18.2 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCC Q ss_conf 8459743610002---589998674399 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNM 101 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgL 101 (149) .--.|-+|||.|. .|++|.++.-|- T Consensus 11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgE 38 (44) T 2yu5_A 11 NPFKCSKCDRVFTQRNYLVQHERTHARK 38 (44) T ss_dssp CSEECSSSSCEESSSHHHHHHHHHCCCC T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCC T ss_conf 6946899899608668999973045898 No 65 >2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1 Probab=32.34 E-value=13 Score=17.76 Aligned_cols=11 Identities=18% Similarity=0.253 Sum_probs=9.3 Q ss_pred HHHHHHCCCCC Q ss_conf 99999727379 Q gi|254780783|r 104 DEYRIKWNLAS 114 (149) Q Consensus 104 ~eYR~kwGLp~ 114 (149) .+|++|||+|- T Consensus 121 ~~Y~ekFGfpF 131 (181) T 2q37_A 121 VLYKKKFGFIF 131 (181) T ss_dssp HHHHHHHSSCC T ss_pred HHHHHHCCCEE T ss_conf 99999769936 No 66 >2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=32.12 E-value=12 Score=17.92 Aligned_cols=28 Identities=25% Similarity=0.551 Sum_probs=19.0 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|.+|.+..-|-.| T Consensus 10 EKpy~C~~Cgk~F~~~s~l~~H~r~HtgeKP 40 (46) T 2epz_A 10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP 40 (46) T ss_dssp CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC T ss_pred CCCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 9696899989970878999998004289889 No 67 >2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=32.10 E-value=12 Score=18.01 Aligned_cols=26 Identities=31% Similarity=0.476 Sum_probs=18.6 Q ss_pred CEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 459743610002---58999867439998 Q gi|254780783|r 78 CLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) --.|-+|||.|. .|++|.+..-|-.| T Consensus 12 py~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVIHTGEKP 40 (46) T ss_dssp CCCCTTTTCCCSSHHHHHHHHTTTCCSCC T ss_pred CEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 95789889992888899998212189889 No 68 >2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Probab=31.89 E-value=13 Score=17.68 Aligned_cols=28 Identities=32% Similarity=0.470 Sum_probs=19.5 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |.+|.++.-|-.| T Consensus 10 EKpy~C~~CgK~F~~~~~L~~H~r~HtgekP 40 (46) T 2ema_A 10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKP 40 (46) T ss_dssp SCCEECSSSCCEESSHHHHHHHHTGGGCCCC T ss_pred CCCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 9894899989862878899987024389889 No 69 >2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.80 E-value=9.2 Score=18.72 Aligned_cols=27 Identities=26% Similarity=0.480 Sum_probs=19.4 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|.+|.+..-|-.| T Consensus 11 kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2ytg_A 11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKP 40 (46) T ss_dssp CSEECTTTCCEESSSHHHHTTGGGGSSCCS T ss_pred CCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 796899999861878899998101289989 No 70 >2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.80 E-value=13 Score=17.80 Aligned_cols=26 Identities=31% Similarity=0.592 Sum_probs=18.5 Q ss_pred CEEECC--CCHHHH---HHHHHHHHHCCCCH Q ss_conf 459743--610002---58999867439998 Q gi|254780783|r 78 CLYCLE--DGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiCle--cGk~~K---~LkRHL~t~hgLtp 103 (149) --.|=+ |||.|. .|++|.++..|..| T Consensus 12 P~~C~~~~C~k~F~~~~~L~~H~r~Htgekp 42 (48) T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRSHSGVKP 42 (48) T ss_dssp CEECCSSSCCCEESSHHHHHHHHTTSCCCCS T ss_pred CEECCCCCCCCEECCHHHHHHHHHCCCCCCC T ss_conf 9589888989970878888877104388979 No 71 >2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Probab=31.76 E-value=15 Score=17.28 Aligned_cols=27 Identities=30% Similarity=0.464 Sum_probs=19.0 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.+..-|-.| T Consensus 11 kpy~C~~CgK~F~~~s~L~~H~riHtgekP 40 (46) T 2emk_A 11 KPYECKECGKAFSQTTHLIQHQRVHTGEKP 40 (46) T ss_dssp CSCBCSSSCCBCSCHHHHHHHHHHHSSCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 794899989998788999998111389989 No 72 >2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.55 E-value=13 Score=17.78 Aligned_cols=27 Identities=33% Similarity=0.471 Sum_probs=18.9 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2emg_A 11 NPFICSECGKVFTHKTNLIIHQKIHTGERP 40 (46) T ss_dssp CSCBCTTTCCBCSSHHHHHHHHTTTSCCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 893899998973877888987104499889 No 73 >2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.48 E-value=9.5 Score=18.62 Aligned_cols=27 Identities=33% Similarity=0.485 Sum_probs=19.0 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeKP 40 (46) T 2ytt_A 11 KPYQCSECGKSFSGSYRLTQHWITHTREKP 40 (46) T ss_dssp CTTCCSSSCCCCSSHHHHHHHHTHHHHCCC T ss_pred CCEECCCCCCEECCHHHHHHHHHCCCCCCC T ss_conf 796889879886875999998203188889 No 74 >2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.42 E-value=16 Score=17.18 Aligned_cols=28 Identities=32% Similarity=0.464 Sum_probs=19.6 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2eow_A 10 EKPYKCNECGKAFRARSSLAIHQATHSGEKP 40 (46) T ss_dssp CCCEECTTSCCEESSHHHHHHHHHHHCCCSC T ss_pred CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 9696789989961887999998022389889 No 75 >2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A* Probab=31.26 E-value=14 Score=17.57 Aligned_cols=12 Identities=17% Similarity=0.423 Sum_probs=9.8 Q ss_pred HHHHHHCCCCCC Q ss_conf 999997273798 Q gi|254780783|r 104 DEYRIKWNLASD 115 (149) Q Consensus 104 ~eYR~kwGLp~d 115 (149) .+|++|||+|-= T Consensus 109 ~~Y~~kFGfpFI 120 (174) T 2o70_A 109 SEYKERFGFPFV 120 (174) T ss_dssp HHHHHHHSSCCC T ss_pred HHHHHHCCCEEE T ss_conf 999997599069 No 76 >2k5e_A Uncharacterized protein; helix protein, structural genomic, structural genomics, PSI-2, protein structure initiative; NMR {Methanococcus jannaschii} Probab=31.19 E-value=29 Score=15.55 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=25.8 Q ss_pred CCCEEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHC Q ss_conf 88459743610-002589998674399989999972 Q gi|254780783|r 76 NGCLYCLEDGM-QFKSLKRHLKTHHNMTPDEYRIKW 110 (149) Q Consensus 76 ~d~iiClecGk-~~K~LkRHL~t~hgLtp~eYR~kw 110 (149) .-.|-|+.||- .|-+|.---. .||+++++.-+.- T Consensus 27 ~~gi~C~~C~~~~~etleeaa~-~hgiD~d~Ll~eL 61 (73) T 2k5e_A 27 SYNLGCIGCMGAQNESLEQGAN-AHGLNVEDILRDL 61 (73) T ss_dssp HTTGGGGGTTTGGGSBHHHHHH-HTTCCHHHHHHHH T ss_pred HCCCCCCCCCCCCCCCHHHHHH-HHCCCHHHHHHHH T ss_conf 8599986789987567999999-9497999999999 No 77 >2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.07 E-value=12 Score=18.05 Aligned_cols=27 Identities=26% Similarity=0.426 Sum_probs=18.8 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|+++.-|-.| T Consensus 10 KPy~C~~Cgk~F~~~~~L~~H~r~HtgekP 39 (42) T 2en2_A 10 KPYKCETCGARFVQVAHLRAHVLIHTGSGP 39 (42) T ss_dssp CSEECTTTCCEESSHHHHHHHTHHHHSCCS T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 897889869983888899998033089888 No 78 >3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A Probab=30.63 E-value=14 Score=17.46 Aligned_cols=20 Identities=5% Similarity=0.147 Sum_probs=13.0 Q ss_pred HHHHHHCCCCCCCCCCCHHHHH Q ss_conf 9999972737988322999999 Q gi|254780783|r 104 DEYRIKWNLASDYPMVSREYAT 125 (149) Q Consensus 104 ~eYR~kwGLp~dyPlvAp~Ys~ 125 (149) .+|++|||+|- =+.+.+.++ T Consensus 130 ~~Y~ekFGfpF--Ii~v~G~s~ 149 (189) T 3o7i_A 130 ARYEARFGRVF--LIRAKGRSG 149 (189) T ss_dssp HHHHHHHSSCC--CCCCTTCCH T ss_pred HHHHHHCCCEE--EEEECCCCH T ss_conf 99999769816--987489899 No 79 >2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=30.29 E-value=14 Score=17.49 Aligned_cols=28 Identities=25% Similarity=0.319 Sum_probs=19.8 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.++.-|-.| T Consensus 10 ekpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 40 (46) T 2en8_A 10 EKSHTCDECGKNFCYISALRIHQRVHMGEKC 40 (46) T ss_dssp CSSEECTTTCCEESSHHHHHHHHTTTCCSCS T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 9892899889787878999998334599899 No 80 >2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=30.17 E-value=13 Score=17.79 Aligned_cols=28 Identities=29% Similarity=0.489 Sum_probs=19.5 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.+..-|-.| T Consensus 8 ekpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 38 (41) T 2ept_A 8 QRVYECQECGKSFRQKGSLTLHERIHTGSGP 38 (41) T ss_dssp CCCEECSSSCCEESSHHHHHHHGGGCCCCSC T ss_pred CCCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 9798689869864867899998123088889 No 81 >2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=30.10 E-value=12 Score=17.90 Aligned_cols=28 Identities=29% Similarity=0.596 Sum_probs=20.0 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|+++.-|-.| T Consensus 10 eKPy~C~~C~K~F~~~s~L~~H~r~HTgeKP 40 (46) T 2em6_A 10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP 40 (46) T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC T ss_pred CCCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 8893899888730577898887334188989 No 82 >2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=30.06 E-value=17 Score=16.94 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=18.1 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCC Q ss_conf 88459743610002---58999867439 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHN 100 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hg 100 (149) +.--.|-+|||.|. .|++|.++.-| T Consensus 10 eKpy~C~~Cgk~F~~~~~L~~H~r~HtG 37 (44) T 2eof_A 10 EKPYECNECQKAFNTKSNLMVHQRTHTG 37 (44) T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHTTT T ss_pred CCCEECCCCCCEECCHHHHHHHCCCCCC T ss_conf 9794789869982877887887065688 No 83 >2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.95 E-value=17 Score=17.08 Aligned_cols=26 Identities=31% Similarity=0.443 Sum_probs=19.0 Q ss_pred CEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 459743610002---58999867439998 Q gi|254780783|r 78 CLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) --.|-+|||.|. .|.+|.++.-|-.| T Consensus 12 py~C~~Cgk~F~~~s~L~~H~r~HtgEKP 40 (46) T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRIHTGEKP 40 (46) T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHHTSSCC T ss_pred CEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 95889839981887999987227499789 No 84 >2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.87 E-value=17 Score=16.94 Aligned_cols=28 Identities=29% Similarity=0.401 Sum_probs=19.5 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.+..-|-.| T Consensus 10 EKpy~C~~CgK~F~~~~~L~~H~r~HtgekP 40 (46) T 2eme_A 10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40 (46) T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGCCCSC T ss_pred CCCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 8897899999860889999998003289879 No 85 >2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.48 E-value=15 Score=17.44 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=19.0 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-||||.|. .|++|.+..-|-.| T Consensus 11 kpy~C~~C~k~F~~~~~L~~H~r~HtgeKP 40 (46) T 2ep0_A 11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHHTTTSSSCC T ss_pred CCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 792898979986877899998004289989 No 86 >1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=29.43 E-value=15 Score=17.32 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=16.8 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCC Q ss_conf 8459743610002---589998674399 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNM 101 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgL 101 (149) .-..|-+||+.|. .|++|+++.||- T Consensus 36 kpy~C~~C~~~f~~~~~L~~H~~~hh~e 63 (70) T 1x5w_A 36 RPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70) T ss_dssp CSEECSSSSCEESSHHHHHHHHHHHHSS T ss_pred CCEECCCCCCEECCHHHHHHHHHHCCCC T ss_conf 7827897788748888999998662688 No 87 >2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.42 E-value=16 Score=17.12 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=19.3 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.+..-|-.| T Consensus 10 ekp~~C~~Cgk~F~~~~~L~~H~r~Htgekp 40 (46) T 2eoh_A 10 KKPYECKECRKTFIQIGHLNQHKRVHTGERS 40 (46) T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 8882899899787854765888423389979 No 88 >2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Probab=29.35 E-value=16 Score=17.21 Aligned_cols=21 Identities=33% Similarity=0.589 Sum_probs=16.6 Q ss_pred EEECCCCHHHH---HHHHHHHHHC Q ss_conf 59743610002---5899986743 Q gi|254780783|r 79 LYCLEDGMQFK---SLKRHLKTHH 99 (149) Q Consensus 79 iiClecGk~~K---~LkRHL~t~h 99 (149) -+|-+|||.|. .|++|++..| T Consensus 13 y~C~~Cgk~F~~~~~L~~H~~~~H 36 (54) T 2eps_A 13 YICQSCGKGFSRPDHLNGHIKQVH 36 (54) T ss_dssp EECSSSCCEESSHHHHHHHHHHTS T ss_pred CCCCCCCCCCCCHHHCCCCCCCCC T ss_conf 668898998687446257465343 No 89 >1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=28.90 E-value=25 Score=15.98 Aligned_cols=25 Identities=20% Similarity=0.420 Sum_probs=15.9 Q ss_pred CEEECCCCHHHH---HHHHHHHHHCCCC Q ss_conf 459743610002---5899986743999 Q gi|254780783|r 78 CLYCLEDGMQFK---SLKRHLKTHHNMT 102 (149) Q Consensus 78 ~iiClecGk~~K---~LkRHL~t~hgLt 102 (149) ...|-+||+.|. .|++|+++.+|-. T Consensus 47 ~~~C~~C~k~F~~~~~L~~H~~~H~g~k 74 (86) T 1x6h_A 47 AFVCSKCGKTFTRRNTMARHADNCAGPD 74 (86) T ss_dssp CEECSSSCCEESCHHHHHHHHHHCCCCC T ss_pred CCCCCCCCCEECCHHHHHHHHHHCCCCC T ss_conf 8716887966267999999998638998 No 90 >2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=28.87 E-value=17 Score=17.02 Aligned_cols=28 Identities=32% Similarity=0.498 Sum_probs=19.3 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |.+|.+..-|-.| T Consensus 10 Ekpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2ytj_A 10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKP 40 (46) T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHTSCCCC T ss_pred CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 9797899879962868999998210389889 No 91 >2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=28.76 E-value=15 Score=17.40 Aligned_cols=27 Identities=30% Similarity=0.362 Sum_probs=18.8 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |.+|.++.-|-.| T Consensus 11 Kpy~C~~CgK~F~~~s~L~~H~r~HtgeKP 40 (46) T 2eop_A 11 KPHECRECGKSFSFNSQLIVHQRIHTGENP 40 (46) T ss_dssp CSCBCTTTCCBCSSHHHHHHHHTTTTTSCC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 791889998998756887687203499878 No 92 >1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Probab=28.42 E-value=21 Score=16.46 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=15.7 Q ss_pred CCEEECCCCHHHH---HHHHHHHH Q ss_conf 8459743610002---58999867 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKT 97 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t 97 (149) .--.|-+|||.|. .|++|.++ T Consensus 10 kPy~C~~Cgk~F~~~~~L~~H~r~ 33 (37) T 1p7a_A 10 KPFQCPDCDRSFSRSDHLALHRKR 33 (37) T ss_dssp SSBCCTTTCCCBSSHHHHHHHHGG T ss_pred CCEECCCCCCEECCHHHHHHHHHH T ss_conf 894789999991778888999862 No 93 >2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=28.35 E-value=19 Score=16.75 Aligned_cols=28 Identities=29% Similarity=0.454 Sum_probs=20.0 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|+. |++|.++.-|-.| T Consensus 10 EKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 40 (46) T 2ytk_A 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40 (46) T ss_dssp SCSEECSSSCCEESSHHHHHHHHHHHSSSSC T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 9897999999975888999998211289888 No 94 >2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=28.30 E-value=16 Score=17.11 Aligned_cols=27 Identities=33% Similarity=0.530 Sum_probs=18.8 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~~~L~~H~~~HtgeKP 40 (46) T 2ene_A 11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKP 40 (46) T ss_dssp SSEECSSSCCEESSHHHHHHHHTTTCCCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 694899999975888999998211289889 No 95 >2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=27.89 E-value=17 Score=17.08 Aligned_cols=28 Identities=29% Similarity=0.348 Sum_probs=20.2 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |.+|.+..-|-.| T Consensus 10 eKpy~C~~CgK~F~~~s~L~~H~~iHtgekP 40 (46) T 2em7_A 10 EKPYKCEECGKGFICRRDLYTHHMVHTGEKP 40 (46) T ss_dssp CCSEECSSSCCEESCHHHHHHHGGGGTTCCC T ss_pred CCCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 8897889989861867889987245589789 No 96 >2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.68 E-value=17 Score=17.05 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=19.5 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgeKP 40 (46) T 2eq3_A 11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKP 40 (46) T ss_dssp CSSEETTTTEECSSHHHHHHHHTTSCCCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 793789999986867889998113288879 No 97 >2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.46 E-value=17 Score=17.00 Aligned_cols=27 Identities=33% Similarity=0.479 Sum_probs=19.4 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|=+|||.|. .|++|.+..-|-.| T Consensus 11 Kpy~C~~CgK~F~~~~~L~~H~r~HtgekP 40 (46) T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQLIHTGEKP 40 (46) T ss_dssp CCEECTTTCCEESSHHHHHHHHTTTCCCCC T ss_pred CCEECCCCCCEECCHHHHHHHHHCCCCCCC T ss_conf 696899999871878999998310189989 No 98 >2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.31 E-value=19 Score=16.76 Aligned_cols=28 Identities=29% Similarity=0.462 Sum_probs=19.9 Q ss_pred CCCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 88459743610002---58999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|. .|++|.++.-|-.| T Consensus 10 EKpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 40 (46) T 2eor_A 10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40 (46) T ss_dssp CCSEECTTTCCEESSHHHHHHHHHHHHSCCC T ss_pred CCCEECCCCCCEECCHHHHHHHHHCCCCCCC T ss_conf 9795899989863865999998001298978 No 99 >2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, metal transport, zinc, iron, repressor, cytoplasm, DNA-binding; 2.60A {Vibrio cholerae} Probab=27.21 E-value=34 Score=15.11 Aligned_cols=86 Identities=9% Similarity=0.133 Sum_probs=45.5 Q ss_pred HHHHHHHHHHH--CCCCCHHHHHHHHH---------HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCC Q ss_conf 99999999973--68888899999999---------99999995026666655578545899857365138884597436 Q gi|254780783|r 16 MTVDIVAAYVS--NHVVPMADIGSLIT---------DVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLED 84 (149) Q Consensus 16 lta~IV~A~vs--~n~v~~~el~~lI~---------~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClec 84 (149) .=..|+..... +..++++||-..+. +||.+|..|....-.-......... --.....-...+++|-.| T Consensus 18 qR~~Il~~l~~~~~~h~sa~el~~~l~~~~~~i~~aTVYR~L~~l~~~gii~~i~~~~~~~-~~~~~~~~~h~hliC~~C 96 (150) T 2w57_A 18 PRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKS-VFELSTQHHHDHLVCLDC 96 (150) T ss_dssp HHHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEEEEECGGGCE-EEEECCSSCCEEEEETTT T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCEE-EEECCCCCCCCEEEECCC T ss_conf 9999999998389999999999999986188867799999999998754689997179727-996589984267999999 Q ss_pred CHHH-------HHHHHHHHHHCCCC Q ss_conf 1000-------25899986743999 Q gi|254780783|r 85 GMQF-------KSLKRHLKTHHNMT 102 (149) Q Consensus 85 Gk~~-------K~LkRHL~t~hgLt 102 (149) |+-+ ..+.+.+...+|.+ T Consensus 97 g~i~~~~~~~~~~~~~~~~~~~gf~ 121 (150) T 2w57_A 97 GEVIEFSDDVIEQRQKEIAAKYNVQ 121 (150) T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCE T ss_pred CCEEEECCHHHHHHHHHHHHHCCCE T ss_conf 9999835515999999999864998 No 100 >2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.21 E-value=22 Score=16.35 Aligned_cols=27 Identities=30% Similarity=0.373 Sum_probs=19.7 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 40 (46) T 2em3_A 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHHHHHCCCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 695899999984888999998211189989 No 101 >2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription regulator; 2.30A {Thermococcus kodakarensis KOD1} SCOP: c.52.4.1 Probab=27.07 E-value=20 Score=16.57 Aligned_cols=27 Identities=30% Similarity=0.541 Sum_probs=21.4 Q ss_pred CEEECCCCH--HHHHHHHHHHHHCCCCHHH Q ss_conf 459743610--0025899986743999899 Q gi|254780783|r 78 CLYCLEDGM--QFKSLKRHLKTHHNMTPDE 105 (149) Q Consensus 78 ~iiClecGk--~~K~LkRHL~t~hgLtp~e 105 (149) +--|=.||| -.-+|.+||+ .||..-.| T Consensus 154 FYKCe~CgKYvDIe~~~~Hlk-~Hgi~v~e 182 (226) T 2czr_A 154 FYKCEECGKYVDIENLEAHLR-EHGIKLHE 182 (226) T ss_dssp EEECTTTCCEEEGGGHHHHHH-TTTCCGGG T ss_pred EEEHHHCCCEECHHHHHHHHH-HCCCCHHH T ss_conf 876244076303877999998-73964433 No 102 >2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.02 E-value=21 Score=16.41 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=17.1 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCC Q ss_conf 8459743610002---58999867439 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHN 100 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hg 100 (149) .--.|=+|||.|. .|.+|.++.-| T Consensus 9 Kpy~C~~CgK~F~~~s~L~~H~r~Htg 35 (42) T 2yte_A 9 KPYSCAECKETFSDNNRLVQHQKMHTV 35 (42) T ss_dssp CSCBCTTTCCBCSSHHHHHHHHHHTSC T ss_pred CCEECCCCCCEECCHHHHHHHCCCCCC T ss_conf 896289988952864686766872468 No 103 >1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Probab=26.92 E-value=20 Score=16.58 Aligned_cols=26 Identities=27% Similarity=0.554 Sum_probs=20.0 Q ss_pred HCCCCCEEECC--CCHHHH---HHHHHHHHH Q ss_conf 13888459743--610002---589998674 Q gi|254780783|r 73 SIENGCLYCLE--DGMQFK---SLKRHLKTH 98 (149) Q Consensus 73 Si~~d~iiCle--cGk~~K---~LkRHL~t~ 98 (149) ...+.--.|.. |||.|. .|++|.++. T Consensus 13 h~~ekp~~C~~~~C~K~F~r~~~L~~H~rtH 43 (47) T 1ncs_A 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43 (47) T ss_dssp EETTTEEECCCTTCCCEECSSSSHHHHHHHH T ss_pred CCCCCCEECCCCCCCCCCCCHHHHHHHCCCC T ss_conf 4789795888889999857535666463340 No 104 >2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=26.79 E-value=22 Score=16.30 Aligned_cols=28 Identities=29% Similarity=0.405 Sum_probs=20.5 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2emm_A 10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40 (46) T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHSCCCT T ss_pred CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 9893899999974878999998112489889 No 105 >2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Probab=26.65 E-value=22 Score=16.28 Aligned_cols=27 Identities=30% Similarity=0.497 Sum_probs=19.7 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.+..-|-.| T Consensus 11 KPy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2emj_A 11 KPFECAECGKSFSISSQLATHQRIHTGEKP 40 (46) T ss_dssp CSEECSSSSCEESSHHHHHHHHHHHTTSCS T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 793899889861768999987325188989 No 106 >2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=26.41 E-value=21 Score=16.43 Aligned_cols=28 Identities=29% Similarity=0.513 Sum_probs=19.7 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|=+|||.|.. |++|.+..-|-.| T Consensus 10 Ekpy~C~~C~k~F~~~~~L~~H~r~HtgeKP 40 (46) T 2en1_A 10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKP 40 (46) T ss_dssp CCSEEETTTTEEESSHHHHHHHGGGGSCCCC T ss_pred CCCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 7897899989956778999998105299889 No 107 >2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=26.39 E-value=20 Score=16.56 Aligned_cols=28 Identities=25% Similarity=0.394 Sum_probs=19.8 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|+. |.+|.+..-|..| T Consensus 10 ekpy~C~~C~k~F~~~~~L~~H~riHt~ekP 40 (46) T 2enc_A 10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKP 40 (46) T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHSCCSSC T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 8881899899764767888898634399889 No 108 >2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=26.25 E-value=20 Score=16.55 Aligned_cols=26 Identities=35% Similarity=0.448 Sum_probs=18.2 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCC Q ss_conf 8459743610002---5899986743999 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMT 102 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLt 102 (149) .--.|-+|||.|. .|++|.++.-|-. T Consensus 11 kpy~C~~Cgk~F~~~~~L~~H~r~HtgEk 39 (44) T 2eoj_A 11 NPYECCECGKVFSRKDQLVSHQKTHSGQS 39 (44) T ss_dssp CSCEETTTTEECSSHHHHHHHHTTSSSSC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCC T ss_conf 89189988987387677899853358998 No 109 >2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Probab=26.25 E-value=17 Score=16.99 Aligned_cols=28 Identities=29% Similarity=0.421 Sum_probs=19.2 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.+..-|-.| T Consensus 10 eKpy~C~~C~k~F~~~~~L~~H~riHtgeKP 40 (46) T 2em0_A 10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKP 40 (46) T ss_dssp CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC T ss_pred CCCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 8795999989872778999998156489889 No 110 >2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=26.14 E-value=12 Score=17.88 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=18.0 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 KPy~C~~Cgk~F~~~~~L~~H~r~HtgekP 39 (42) T 2ytb_A 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39 (42) T ss_dssp CSBCCTTTTCCBSSHHHHHTTGGGTSCCSC T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 997899988864866788987242088888 No 111 >1d5y_A ROB transcription factor; protein-DNA complex, DNA, transcription/DNA complex; HET: DNA; 2.70A {Escherichia coli} SCOP: a.4.1.8 a.4.1.8 d.60.1.2 Probab=26.13 E-value=35 Score=15.00 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=22.4 Q ss_pred EECCCCH-HHHHHHHHHHHHCCCCHHHHHHH Q ss_conf 9743610-00258999867439998999997 Q gi|254780783|r 80 YCLEDGM-QFKSLKRHLKTHHNMTPDEYRIK 109 (149) Q Consensus 80 iClecGk-~~K~LkRHL~t~hgLtp~eYR~k 109 (149) |.+.||= .--.+.|.....+|+||.+||+. T Consensus 74 ia~~~gf~~~~~f~r~fk~~~g~tP~~~r~~ 104 (292) T 1d5y_A 74 IALQYRFDSQQTFTRAFKKQFAQTPALYRRS 104 (292) T ss_dssp HHHHTTCSCHHHHHHHHHHHHSSCHHHHHHC T ss_pred HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHC T ss_conf 9998199855799999999988583888846 No 112 >2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=26.04 E-value=19 Score=16.76 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=19.2 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.+..-|-.| T Consensus 10 EKpy~C~~C~k~F~~~~~L~~H~r~HtgeKP 40 (46) T 2elz_A 10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT 40 (46) T ss_dssp CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC T ss_pred CCCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 5895899899672867999998215088989 No 113 >2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=25.91 E-value=22 Score=16.34 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=17.2 Q ss_pred CEEECCCCHHHH---HHHHHHHHHCC Q ss_conf 459743610002---58999867439 Q gi|254780783|r 78 CLYCLEDGMQFK---SLKRHLKTHHN 100 (149) Q Consensus 78 ~iiClecGk~~K---~LkRHL~t~hg 100 (149) ---|=+||+.|. .|++|+++..| T Consensus 9 PykC~~C~k~F~~~~~L~~H~r~Htg 34 (36) T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRKHTG 34 (36) T ss_dssp SEECSSSSCEESSHHHHHHHHHHHTC T ss_pred CEECCCCCCCCCCHHHHHHHCCCCCC T ss_conf 98689998871988999988557488 No 114 >2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=25.69 E-value=21 Score=16.42 Aligned_cols=27 Identities=33% Similarity=0.515 Sum_probs=19.2 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~~~L~~H~r~HtgekP 40 (46) T 2yts_A 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHGGGTSSCCS T ss_pred CCEECCCCCCEECCHHHHHHHHHCCCCCCC T ss_conf 795899999830788999998212289889 No 115 >2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=25.22 E-value=19 Score=16.67 Aligned_cols=28 Identities=29% Similarity=0.373 Sum_probs=19.6 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2emp_A 10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKP 40 (46) T ss_dssp CCSEECSSSCCEESCHHHHHHHHHHHHCCSC T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 8383789999934758899998213389889 No 116 >2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=25.03 E-value=20 Score=16.55 Aligned_cols=19 Identities=37% Similarity=0.607 Sum_probs=9.7 Q ss_pred EEECCCCHHHH---HHHHHHHH Q ss_conf 59743610002---58999867 Q gi|254780783|r 79 LYCLEDGMQFK---SLKRHLKT 97 (149) Q Consensus 79 iiClecGk~~K---~LkRHL~t 97 (149) -.|-+||+.|. .|++|... T Consensus 19 ~~C~~C~~~f~~~~~l~~H~~~ 40 (77) T 2cot_A 19 YKCDECGKSFSHSSDLSKHRRT 40 (77) T ss_dssp SBCSSSCCBCSCHHHHHHHHTT T ss_pred CCCCCCCCEECCHHHHHHHHHH T ss_conf 0899999985876674899986 No 117 >2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=25.01 E-value=17 Score=17.08 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=19.4 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|=+|||.|.. |++|.+..-|-.| T Consensus 11 Kpy~C~~C~k~F~~~~~L~~H~r~HtgekP 40 (46) T 2eoy_A 11 KCFKCNKCEKTFSCSKYLTQHERIHTRGVK 40 (46) T ss_dssp CCEECSSSCCEESSSHHHHHHHTTCCSCCT T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 791899999884887999998424389488 No 118 >1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Probab=24.88 E-value=20 Score=16.58 Aligned_cols=24 Identities=29% Similarity=0.337 Sum_probs=18.2 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCC Q ss_conf 8459743610002---58999867439 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHN 100 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hg 100 (149) ....|-+||+.|. .|++|....|+ T Consensus 30 k~~~C~~C~k~f~~~~~l~~H~~~hh~ 56 (88) T 1llm_C 30 KPFACDICGRKFARSDERKRHRDIQHI 56 (88) T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHTH T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCC T ss_conf 877554444544788999998536479 No 119 >1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=24.81 E-value=27 Score=15.78 Aligned_cols=19 Identities=32% Similarity=0.571 Sum_probs=8.8 Q ss_pred EEECCCCHHHHH---HHHHHHH Q ss_conf 597436100025---8999867 Q gi|254780783|r 79 LYCLEDGMQFKS---LKRHLKT 97 (149) Q Consensus 79 iiClecGk~~K~---LkRHL~t 97 (149) -.|-+||+.|.. |++|.++ T Consensus 15 y~C~~C~k~f~~~~~L~~H~~~ 36 (72) T 1x6e_A 15 YGCVECGKAFSRSSILVQHQRV 36 (72) T ss_dssp EECSSSCCEESSHHHHHHHHHG T ss_pred CCCCCCCCEECCHHHHHHHHHH T ss_conf 1799998873989999999987 No 120 >2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=24.56 E-value=19 Score=16.67 Aligned_cols=27 Identities=33% Similarity=0.513 Sum_probs=18.1 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.+..-|-.| T Consensus 11 kPy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2ytr_A 11 KPYKCNECGKAFSQTSKLARHQRIHTGEKP 40 (46) T ss_dssp CTTCCTTTCCCCSSHHHHHHHHTTTTTCSC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 895889989975768999998331399978 No 121 >2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=24.51 E-value=20 Score=16.59 Aligned_cols=28 Identities=29% Similarity=0.444 Sum_probs=19.9 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.+..-|-.| T Consensus 10 Ekpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2emh_A 10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40 (46) T ss_dssp CCSEECTTTCCEESSHHHHHHHHHHHHCSSC T ss_pred CCCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 9796899999950878999998113389889 No 122 >2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=24.46 E-value=21 Score=16.47 Aligned_cols=27 Identities=33% Similarity=0.474 Sum_probs=19.7 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|=+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2yu8_A 11 KPYKCNECGKVFTQNSHLARHRRVHTGGKP 40 (46) T ss_dssp SSEECSSSCCEESSSHHHHHHTHHHHSCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 791899999995888999998310189989 No 123 >2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=24.42 E-value=21 Score=16.44 Aligned_cols=27 Identities=30% Similarity=0.400 Sum_probs=19.0 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~C~K~F~~~~~L~~H~r~HtgekP 40 (46) T 2ytf_A 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHHHTSCSSSS T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 798899989986888899998045489889 No 124 >1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Probab=24.14 E-value=22 Score=16.35 Aligned_cols=26 Identities=31% Similarity=0.359 Sum_probs=15.5 Q ss_pred CCCCEEECCCCHHHH---HHHHHHHHHCC Q ss_conf 888459743610002---58999867439 Q gi|254780783|r 75 ENGCLYCLEDGMQFK---SLKRHLKTHHN 100 (149) Q Consensus 75 ~~d~iiClecGk~~K---~LkRHL~t~hg 100 (149) .+..-.|=+||+.|. .|++|.++..| T Consensus 59 ~~~~~~C~~Cgk~F~~~~~L~~H~r~Htg 87 (90) T 1a1h_A 59 GEKPFACDICGRKFARSDERKRHTKIHLR 87 (90) T ss_dssp CCCCEECTTTCCEESSHHHHHHHHGGGGC T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCC T ss_conf 98882679898952888999999741465 No 125 >2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405} Probab=23.81 E-value=34 Score=15.06 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=24.7 Q ss_pred CCEEECCCC-HHHHHHHHHHHHHCCCCHHHHHHH Q ss_conf 845974361-000258999867439998999997 Q gi|254780783|r 77 GCLYCLEDG-MQFKSLKRHLKTHHNMTPDEYRIK 109 (149) Q Consensus 77 d~iiClecG-k~~K~LkRHL~t~hgLtp~eYR~k 109 (149) -.|-|+.|+ .+|.+|.--.. .||+++++.-+. T Consensus 26 ~Gi~C~gc~~a~~~tL~eaa~-~~gid~~~ll~e 58 (76) T 2k53_A 26 NGMHCLGCPSSMGESIEDACA-VHGIDADKLVKE 58 (76) T ss_dssp TTCCCCSSCCCCCSBHHHHHH-HHTCCHHHHHHH T ss_pred CCCCCCCCCCCCCCCHHHHHH-HHCCCHHHHHHH T ss_conf 699885787766670999999-949799999999 No 126 >2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.72 E-value=20 Score=16.63 Aligned_cols=28 Identities=32% Similarity=0.447 Sum_probs=19.3 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 eKpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2ep3_A 10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP 40 (46) T ss_dssp CCSEECSSSCCEESSHHHHHHHHTTTTTSCC T ss_pred CCCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 9794899989962877899998002389889 No 127 >1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, monomer, lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1 Probab=23.71 E-value=39 Score=14.70 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=16.6 Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH Q ss_conf 9999999999997368888899999999999 Q gi|254780783|r 13 FLEMTVDIVAAYVSNHVVPMADIGSLITDVH 43 (149) Q Consensus 13 l~~lta~IV~A~vs~n~v~~~el~~lI~~v~ 43 (149) +.|++.+|.+.|++...++.++|..+|.+.| T Consensus 58 y~ela~~il~~fi~~~~i~~~~L~~i~~~ay 88 (514) T 1kl7_A 58 FQDLAFAIMRLYIAQEEIPDADLKDLIKRSY 88 (514) T ss_dssp HHHHHHHHHHTTSCTTTSCHHHHHHHHHHHT T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH T ss_conf 9999999999865954289999999999997 No 128 >2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.24 E-value=23 Score=16.13 Aligned_cols=27 Identities=30% Similarity=0.460 Sum_probs=18.9 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |.+|.++.-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2yrj_A 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKP 40 (46) T ss_dssp CCEECSSSCCEESSHHHHHHHHTTTSSCCS T ss_pred CCEECCCCCCCCCCHHHHHHHHHHCCCCCC T ss_conf 792899999840879999998300289989 No 129 >2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=23.16 E-value=24 Score=16.12 Aligned_cols=23 Identities=30% Similarity=0.413 Sum_probs=16.4 Q ss_pred CEEECCCCHHHHH---HHHHHHHHCC Q ss_conf 4597436100025---8999867439 Q gi|254780783|r 78 CLYCLEDGMQFKS---LKRHLKTHHN 100 (149) Q Consensus 78 ~iiClecGk~~K~---LkRHL~t~hg 100 (149) --.|-+|||.|.. |.+|.++.-| T Consensus 12 py~C~~CgK~F~~~s~L~~H~riHtg 37 (44) T 2eou_A 12 TSECQECGKIFRHSSLLIEHQALHAG 37 (44) T ss_dssp CCCCTTTCCCCSSHHHHHHHHHHHTT T ss_pred CCCCCCCCCEECCCHHHHHHCCCCCC T ss_conf 98289878713842405775226789 No 130 >2osz_A Nucleoporin P58/P45; NPC, structure, structural protein; 2.85A {Rattus norvegicus} Probab=23.15 E-value=40 Score=14.63 Aligned_cols=38 Identities=11% Similarity=0.181 Sum_probs=31.1 Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC Q ss_conf 99999999999736888889999999999999995026 Q gi|254780783|r 14 LEMTVDIVAAYVSNHVVPMADIGSLITDVHSALQRVVS 51 (149) Q Consensus 14 ~~lta~IV~A~vs~n~v~~~el~~lI~~v~~aL~~l~~ 51 (149) +|.+=.-+.+....+++++.||..-+...|.++-+|.+ T Consensus 28 IE~~E~hl~s~s~~~~~TPqdL~~~l~~~~esFiALA~ 65 (93) T 2osz_A 28 IEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAA 65 (93) T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999844688889999999999999999999999 No 131 >2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.03 E-value=30 Score=15.47 Aligned_cols=26 Identities=27% Similarity=0.434 Sum_probs=18.3 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCC Q ss_conf 884597436100025---89998674399 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNM 101 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgL 101 (149) +.--.|-+|||.|.. |.+|.++.-|- T Consensus 10 eKpy~C~~C~k~F~~~~~L~~H~~~Htge 38 (46) T 2ytd_A 10 EKPYKCSECGKAFHRHTHLNEHRRIHTGY 38 (46) T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHTCC T ss_pred CCCEECCCCCCCCCCHHHHHHHHHCCCCC T ss_conf 59968999998847768888873261988 No 132 >2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.44 E-value=21 Score=16.44 Aligned_cols=22 Identities=36% Similarity=0.538 Sum_probs=16.0 Q ss_pred CEEECCCCHHHHH---HHHHHHHHC Q ss_conf 4597436100025---899986743 Q gi|254780783|r 78 CLYCLEDGMQFKS---LKRHLKTHH 99 (149) Q Consensus 78 ~iiClecGk~~K~---LkRHL~t~h 99 (149) --.|-+|||.|.. |++|.+..| T Consensus 12 py~C~~Cgk~F~~~~~L~~H~r~~H 36 (47) T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYH 36 (47) T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTT T ss_pred CEECCCCCCEECCHHHHHHHCCCCC T ss_conf 9489999999386689997670674 No 133 >2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.41 E-value=23 Score=16.15 Aligned_cols=26 Identities=35% Similarity=0.469 Sum_probs=18.0 Q ss_pred CEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 459743610002---58999867439998 Q gi|254780783|r 78 CLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) --.|-+|||.|. .|++|.++.-|-.| T Consensus 12 py~C~~Cgk~F~~~s~L~~H~r~HtgeKP 40 (46) T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGIHTGEKP 40 (46) T ss_dssp TTCCSSSCCCCSSHHHHHHHHTTTSCSCC T ss_pred CEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 92899989986888999998321188989 No 134 >2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus} Probab=22.28 E-value=17 Score=16.98 Aligned_cols=20 Identities=40% Similarity=0.627 Sum_probs=13.1 Q ss_pred EEECCCCHHHHHHHHHHHHHC Q ss_conf 597436100025899986743 Q gi|254780783|r 79 LYCLEDGMQFKSLKRHLKTHH 99 (149) Q Consensus 79 iiClecGk~~K~LkRHL~t~h 99 (149) --|-.|||.| +||-.|-|.| T Consensus 4 y~c~~c~krf-slkhqleth~ 23 (28) T 2kvf_A 4 YSCSVCGKRF-SLKHQMETHY 23 (28) T ss_dssp EECSSSCCEE-SCHHHHHHHH T ss_pred CCCCCCCCCC-CHHHHHHHCE T ss_conf 3016433300-1134312113 No 135 >1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Probab=22.08 E-value=27 Score=15.69 Aligned_cols=25 Identities=28% Similarity=0.577 Sum_probs=17.9 Q ss_pred EEE--CCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 597--43610002---58999867439998 Q gi|254780783|r 79 LYC--LEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 79 iiC--lecGk~~K---~LkRHL~t~hgLtp 103 (149) -.| -+||+.|. .|++|.++.+|-.| T Consensus 20 y~C~~~~C~k~F~~~~~l~~H~~~H~~~k~ 49 (73) T 1f2i_G 20 YACPVESCDRRFSRSDELTRHIRIHTGQKP 49 (73) T ss_dssp EECSSTTBCCEESSHHHHHHHHHHHHCCCC T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCC T ss_conf 539988788932978999999986089838 No 136 >3abq_B Ethanolamine ammonia-lyase light chain; (beta/alpha)8 fold, cobalt, cobalamin; HET: B12; 2.05A {Escherichia coli} PDB: 3abo_B* 3abr_B* 3abs_B* Probab=22.07 E-value=20 Score=16.58 Aligned_cols=92 Identities=10% Similarity=0.167 Sum_probs=57.6 Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCC Q ss_conf 99973688888999999999999999502666665557854589985736513888459743610002589998674399 Q gi|254780783|r 22 AAYVSNHVVPMADIGSLITDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQFKSLKRHLKTHHNM 101 (149) Q Consensus 22 ~A~vs~n~v~~~el~~lI~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~K~LkRHL~t~hgL 101 (149) +++--++.|...+|-.+|.+|-+-+...... +.......... ...+..|. | ..++ T Consensus 4 ~~~~~~~~m~e~~l~~iv~~vl~e~~~~~~~---~~~~~~~~~~~----~~~~~~~~--~----------------~~di 58 (306) T 3abq_B 4 SSHHHHHHMDQKQIEEIVRSVMASMGQAAPA---PSEAKCATTNC----AAPVTSES--C----------------ALDL 58 (306) T ss_dssp ----------------------------------------------------------------------------CCCT T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCC----CCCCCCCC--C----------------CCCC T ss_conf 4332112579999999999999996267888---87766667888----88765445--5----------------6787 Q ss_pred CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH Q ss_conf 989999972737988322999999999999981998101 Q gi|254780783|r 102 TPDEYRIKWNLASDYPMVSREYATTRSKLAKNMGLGRGR 140 (149) Q Consensus 102 tp~eYR~kwGLp~dyPlvAp~Ys~~Rs~~Ak~~GLg~~~ 140 (149) |..+.|..+|.+ -|--.-.|++-|+.-.-.+|||+-. T Consensus 59 ~~~~~~~~~~v~--np~~~d~w~~Lr~~T~ARIglGRaG 95 (306) T 3abq_B 59 GSAEAKAWIGVE--NPHRADVLTELRRSTVARVCTGRAG 95 (306) T ss_dssp TSHHHHHCCCCS--SCSCHHHHHHHHHTCSSCCSCCCBT T ss_pred CHHHHHHHCCCC--CCCCHHHHHHHHHCCHHHEECCCCC T ss_conf 305578760899--9888409999984372750315668 No 137 >2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.06 E-value=25 Score=15.96 Aligned_cols=26 Identities=27% Similarity=0.504 Sum_probs=18.8 Q ss_pred CEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 4597436100025---8999867439998 Q gi|254780783|r 78 CLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) --.|-+|||.|.. |.+|.+..-|-.| T Consensus 12 py~C~~Cgk~F~~~s~L~~H~riHtgekP 40 (46) T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRLHTGQRP 40 (46) T ss_dssp SSSBTTTTBCCSSHHHHHHHHHHHHSCCC T ss_pred CEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 96899989964877999998131489789 No 138 >2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=21.93 E-value=18 Score=16.92 Aligned_cols=27 Identities=33% Similarity=0.509 Sum_probs=18.3 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCC Q ss_conf 884597436100025---899986743999 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMT 102 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLt 102 (149) +.--.|-+|||.|.. |.+|.+..-|-+ T Consensus 10 eKPy~C~~CgK~F~~~s~L~~HqriHtgE~ 39 (44) T 2eox_A 10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKS 39 (44) T ss_dssp CCCEEETTTTEEESSSHHHHTTHHHHCCCC T ss_pred CCCEECCCCCCEECCHHHHHHHCCCCCCCC T ss_conf 849489898884086488999741348899 No 139 >2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=21.81 E-value=24 Score=16.05 Aligned_cols=28 Identities=32% Similarity=0.437 Sum_probs=19.1 Q ss_pred CCCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 884597436100025---8999867439998 Q gi|254780783|r 76 NGCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 76 ~d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) +.--.|-+|||.|.. |++|.++.-|-.| T Consensus 10 ekpy~C~~Cgk~F~~~~~L~~H~r~HtgEKP 40 (46) T 2ytn_A 10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40 (46) T ss_dssp CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC T ss_pred CCCEECCCCCCEECCHHHHHHHHHCCCCCCC T ss_conf 9793899879870878999998202087979 No 140 >2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A* Probab=21.79 E-value=43 Score=14.46 Aligned_cols=74 Identities=9% Similarity=0.025 Sum_probs=40.9 Q ss_pred HCCCCCHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH-CCCCCEEECCCCHHH------- Q ss_conf 36888889999999---------9999999950266666555785458998573651-388845974361000------- Q gi|254780783|r 26 SNHVVPMADIGSLI---------TDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKS-IENGCLYCLEDGMQF------- 88 (149) Q Consensus 26 s~n~v~~~el~~lI---------~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kS-i~~d~iiClecGk~~------- 88 (149) ....+++++|-..+ .+||.+|..|....-.-....... .+. -.-. -...+++|-.||+-+ T Consensus 34 ~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~~~gii~~i~~~~~--~~~-y~~~~~~h~h~iC~~Cg~i~~~~~~~l 110 (145) T 2fe3_A 34 SMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDA--SSR-FDFVTSDHYHAICENCGKIVDFHYPGL 110 (145) T ss_dssp CSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEEECCTTS--CCE-EEECCCCEEEEEETTTCCEEECCCCCC T ss_pred CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECCC--CEE-EECCCCCCEEEEECCCCCEEEECCCCH T ss_conf 89999999999999850789888899999999985521799971898--179-953788520799889998898336106 Q ss_pred HHHHHHHHHHCCCC Q ss_conf 25899986743999 Q gi|254780783|r 89 KSLKRHLKTHHNMT 102 (149) Q Consensus 89 K~LkRHL~t~hgLt 102 (149) ..+.+.+...+|.+ T Consensus 111 ~~~~~~~~~~~gf~ 124 (145) T 2fe3_A 111 DEVEQLAAHVTGFK 124 (145) T ss_dssp HHHHHHHHHHHCCE T ss_pred HHHHHHHHHHCCCE T ss_conf 68999888867988 No 141 >2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=21.57 E-value=27 Score=15.70 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=18.8 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) ..-.|=+|||.|.. |++|.++.-|-.| T Consensus 11 kpy~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2eom_A 11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKP 40 (46) T ss_dssp SSCCCSSSCCCCSSHHHHHHHHHHHSSCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 794899899681766889998203289889 No 142 >2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=21.42 E-value=22 Score=16.35 Aligned_cols=27 Identities=30% Similarity=0.429 Sum_probs=18.6 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |.+|.++.-|-.| T Consensus 11 Kpy~C~~CgK~F~~~s~L~~H~r~HtgekP 40 (46) T 2ytp_A 11 RHYECSECGKAFARKSTLIMHQRIHTGEKP 40 (46) T ss_dssp CCEECSSSCCEESSHHHHHHHHTTTSCCCC T ss_pred CCEECCCCCCCCCCHHHHHHHCCCCCCCCC T ss_conf 894889989834668999988245489889 No 143 >2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, gene regulation; 2.70A {Mycobacterium tuberculosis} Probab=21.36 E-value=44 Score=14.40 Aligned_cols=85 Identities=13% Similarity=0.097 Sum_probs=46.6 Q ss_pred HHHHHHH-HCCCCCHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHH Q ss_conf 9999997-36888889999999---------9999999950266666555785458998573651388845974361000 Q gi|254780783|r 19 DIVAAYV-SNHVVPMADIGSLI---------TDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLYCLEDGMQF 88 (149) Q Consensus 19 ~IV~A~v-s~n~v~~~el~~lI---------~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~iiClecGk~~ 88 (149) .|..... ....++++||-..+ .+||.+|..|....-.-......... .-.....-...+++|..||+-+ T Consensus 15 ~Il~~l~~~~~~~sa~ei~~~l~~~~~~i~~aTVYR~L~~L~~~gli~~i~~~~~~~-~y~~~~~~~h~h~iC~~Cg~i~ 93 (131) T 2o03_A 15 AISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGES-VYRRCSEHHHHHLVCRSCGSTI 93 (131) T ss_dssp HHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSEEEEECTTSCE-EEEECCSSSCEEEEETTTCCEE T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCE-EEEECCCCCEEEEEECCCCCEE T ss_conf 999999808999899999999997588998889999999998689489998089958-9985798633789985899999 Q ss_pred -------HHHHHHHHHHCCCCHH Q ss_conf -------2589998674399989 Q gi|254780783|r 89 -------KSLKRHLKTHHNMTPD 104 (149) Q Consensus 89 -------K~LkRHL~t~hgLtp~ 104 (149) ..+.+++...+|.+.. T Consensus 94 ~i~~~~l~~~~~~i~~~~gf~i~ 116 (131) T 2o03_A 94 EVGDHEVEAWAAEVATKHGFSDV 116 (131) T ss_dssp EECCHHHHHHHHHHHHHTTCSSC T ss_pred EECCHHHHHHHHHHHHHCCCEEE T ss_conf 95256688999999986499897 No 144 >2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 2raw_A 1f3h_A 1m4m_A 2rax_A 1xox_A Probab=21.13 E-value=25 Score=15.94 Aligned_cols=31 Identities=16% Similarity=0.086 Sum_probs=21.0 Q ss_pred CCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCC Q ss_conf 8884597436100025899986743999899999727 Q gi|254780783|r 75 ENGCLYCLEDGMQFKSLKRHLKTHHNMTPDEYRIKWN 111 (149) Q Consensus 75 ~~d~iiClecGk~~K~LkRHL~t~hgLtp~eYR~kwG 111 (149) .+|.|.|+-||+.+.-. .-+=+|-+--+||. T Consensus 51 ~~D~v~Cf~C~~~l~~W------e~~DdP~~eH~~~~ 81 (142) T 2qfa_A 51 EPDLAQCFFCFKELEGW------EPDDDPIEEHKKHS 81 (142) T ss_dssp BTTCEEETTTCCEECCC------CTTCCHHHHHHHHC T ss_pred CCCEEEECCCCCCCCCC------CCCCCHHHHHHHHC T ss_conf 99868967467883788------89999999999988 No 145 >3boq_A Transcriptional regulator, MARR family; structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3} Probab=21.10 E-value=39 Score=14.71 Aligned_cols=22 Identities=18% Similarity=0.300 Sum_probs=10.7 Q ss_pred HHHHHHHHCCCCHHHHHHHCCC Q ss_conf 8999867439998999997273 Q gi|254780783|r 91 LKRHLKTHHNMTPDEYRIKWNL 112 (149) Q Consensus 91 LkRHL~t~hgLtp~eYR~kwGL 112 (149) +-++|...||||+.+|+.-+-| T Consensus 35 l~~~l~~~~glt~~q~~vL~~L 56 (160) T 3boq_A 35 LNRQLLDETGLSLAKFDAMAQL 56 (160) T ss_dssp HHHHHHHHHSCCHHHHHHHHHH T ss_pred HHHHHHHHHCCCHHHHHHHHHH T ss_conf 9999988819299999999999 No 146 >2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens} Probab=20.84 E-value=39 Score=14.68 Aligned_cols=27 Identities=41% Similarity=0.663 Sum_probs=21.5 Q ss_pred CCCCEEECCCCHHH---HHHHHHHHHHCCC Q ss_conf 88845974361000---2589998674399 Q gi|254780783|r 75 ENGCLYCLEDGMQF---KSLKRHLKTHHNM 101 (149) Q Consensus 75 ~~d~iiClecGk~~---K~LkRHL~t~hgL 101 (149) ......|-||--+| -+||||.+..|+= T Consensus 7 eNg~~FCneCD~kF~Ee~sLK~h~LqvHsD 36 (43) T 2yrm_A 7 GNGAFFCNECDCRFSEEASLKRHTLQTHSD 36 (43) T ss_dssp SSCCBCCSSSCCCBSSHHHHHHHHHHHTCT T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHHCC T ss_conf 687677434541021577887645313146 No 147 >2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.62 E-value=26 Score=15.82 Aligned_cols=27 Identities=30% Similarity=0.485 Sum_probs=18.7 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|-+|||.|.. |++|.+..-|-.| T Consensus 11 kpy~C~~C~k~F~~~~~l~~H~riHtgeKP 40 (46) T 2eq4_A 11 KLYNCKECGKSFSRAPCLLKHERLHSGEKP 40 (46) T ss_dssp CCCCBTTTTBCCSCHHHHHHHHHHCCSSSC T ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCC T ss_conf 882899889896867899998613399879 No 148 >2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Probab=20.53 E-value=25 Score=15.91 Aligned_cols=27 Identities=22% Similarity=0.371 Sum_probs=18.7 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|=+|||.|. .|.+|.++.-|-.| T Consensus 11 Kpy~C~~CgK~F~~~s~L~~H~r~HtgeKP 40 (46) T 2el4_A 11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKP 40 (46) T ss_dssp CSEECSSSSCEESSHHHHHHHGGGSSSCCC T ss_pred CCEECCCCCCEECCHHHHHHHCCCCCCCCC T ss_conf 897899829980864676676035699789 No 149 >1lva_A Selenocysteine-specific elongation factor; winged-helix, translation; 2.12A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35 a.4.5.35 a.4.5.35 PDB: 2uwm_A 2ply_A 1wsu_A Probab=20.48 E-value=36 Score=14.93 Aligned_cols=32 Identities=13% Similarity=0.103 Sum_probs=23.6 Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC Q ss_conf 00025899986743999899999727379883 Q gi|254780783|r 86 MQFKSLKRHLKTHHNMTPDEYRIKWNLASDYP 117 (149) Q Consensus 86 k~~K~LkRHL~t~hgLtp~eYR~kwGLp~dyP 117 (149) ..++.+-+++.....+|..++|..+|+...|- T Consensus 202 ~~~~~~l~~l~~~~~itv~~~rd~~g~SRK~a 233 (258) T 1lva_A 202 GEAREVIKNLASTGPFGLAEARDALGSSRKYV 233 (258) T ss_dssp HHHHHHHHHHHTTSCBCHHHHHHHHTCCHHHH T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH T ss_conf 99999999788749874999998879879999 No 150 >2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.32 E-value=35 Score=15.02 Aligned_cols=27 Identities=26% Similarity=0.360 Sum_probs=19.2 Q ss_pred CCEEECCCCHHHH---HHHHHHHHHCCCCH Q ss_conf 8459743610002---58999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFK---SLKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K---~LkRHL~t~hgLtp 103 (149) .--.|-+|||.|. .|++|.++.-|-.| T Consensus 11 Kpy~C~~C~k~F~~~~~L~~H~r~HtgeKP 40 (46) T 2eov_A 11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERH 40 (46) T ss_dssp CSCBCSSSCCBCSSHHHHHHHHHHHSCCSS T ss_pred CCEECCCCCCEECCHHHHHHHHCCCCCCCC T ss_conf 894899879881778999998125499888 No 151 >2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.22 E-value=34 Score=15.06 Aligned_cols=27 Identities=26% Similarity=0.376 Sum_probs=18.9 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 84597436100025---8999867439998 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) .--.|=+|||.|.. |++|.+..-|-.| T Consensus 11 Kpy~C~~Cgk~F~~~~~l~~H~riHtgekP 40 (46) T 2eml_A 11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40 (46) T ss_dssp CSEECSSSCCEESSHHHHHHHHGGGSSCCC T ss_pred CCEECCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 797789869980878999998212088979 No 152 >1dtd_B Metallocarboxypeptidase inhibitor; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Hirudo medicinalis} SCOP: g.30.1.1 PDB: 1dtv_A 1zfi_A 1zfl_A 2abz_C Probab=20.21 E-value=27 Score=15.74 Aligned_cols=13 Identities=8% Similarity=0.059 Sum_probs=10.6 Q ss_pred CCCCCEEECCCCH Q ss_conf 3888459743610 Q gi|254780783|r 74 IENGCLYCLEDGM 86 (149) Q Consensus 74 i~~d~iiClecGk 86 (149) .+||.+.||+|-. T Consensus 7 yqpdqvccficrg 19 (61) T 1dtd_B 7 YQPDQVCCFICRG 19 (61) T ss_dssp ECSSCEEEEEEES T ss_pred ECCCCEEEEEECC T ss_conf 2788379999558 No 153 >2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.18 E-value=25 Score=16.00 Aligned_cols=25 Identities=36% Similarity=0.454 Sum_probs=17.5 Q ss_pred CCEEECCCCHHHHH---HHHHHHHHCCC Q ss_conf 84597436100025---89998674399 Q gi|254780783|r 77 GCLYCLEDGMQFKS---LKRHLKTHHNM 101 (149) Q Consensus 77 d~iiClecGk~~K~---LkRHL~t~hgL 101 (149) .--.|-+|||.|.. |++|.+..-|- T Consensus 11 Kpy~C~~Cgk~F~~~s~L~~H~r~HTGE 38 (44) T 2en7_A 11 KPYVCNECGKAFRSKSYLIIHTRTHTGE 38 (44) T ss_dssp SSSCCTTTCCCCSSHHHHHHHHTTTCCS T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCCC T ss_conf 8818899989978778989871365889 No 154 >2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.08 E-value=25 Score=16.00 Aligned_cols=26 Identities=35% Similarity=0.457 Sum_probs=17.8 Q ss_pred CEEECCCCHHHHH---HHHHHHHHCCCCH Q ss_conf 4597436100025---8999867439998 Q gi|254780783|r 78 CLYCLEDGMQFKS---LKRHLKTHHNMTP 103 (149) Q Consensus 78 ~iiClecGk~~K~---LkRHL~t~hgLtp 103 (149) --.|-+|||.|.. |++|.++.-|-.| T Consensus 12 py~C~~Cgk~F~~~s~L~~H~r~HtgekP 40 (46) T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGIHTGEKP 40 (46) T ss_dssp SCBCSSSCCBCSSHHHHHHHHTTTTTSSC T ss_pred CEECCCCCCEECCHHHHHHHHHCCCCCCC T ss_conf 92899999872878999998300288989 Done!