HHsearch alignment for GI: 254780784 and conserved domain: COG0557

Probab=98.01  E-value=3.5e-05  Score=60.86  Aligned_cols=196  Identities=21%  Similarity=0.266  Sum_probs=108.4

Q ss_pred             ECCCCCCCCCCCCEEEEECCCCCEEEECCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCE
Q ss_conf             31442201365510010055651244324536---55688999999999999999999999843566--74332244875
Q gi|254780784|r  478 DISGDEDHLGHMDFKVAGTDSGITAMQMDMKI---GGISENIMVMALQQAKRGRLHILNEMSKVLSE--SRLQLGEFTPR  552 (699)
Q Consensus       478 DI~G~ED~~GdMDFKvaGT~~GiTa~QmDiK~---~gi~~~il~~al~~A~~gr~~il~~m~~~~~~--~~~~~~~~ap~  552 (699)
T Consensus       479 k~~~l~~~l~~lg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~---------~~~lRsm~~a~Ys~~~~~HfgL~~~~  549 (706)
T COG0557         479 KLQSLREFLQNLGLVLPLGGSKPQPQDYQILLETVKGRPLEAVLQ---------TLLLRSMKQAEYSPDNVGHFGLALDY  549 (706)
T ss_pred             HHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHH---------HHHHHHHCCCCCCCCCCCCEECCCCC
T ss_conf             899999999966811047877568799999976303762799999---------99986430063688887760114342


Q ss_pred             EEEEEECCCCEEEEECCCCHHHHHHHHHHC-CEEEEEC--CEE----E-EEEECCHHHHHHHHHHHHHHC---CCCCCCC
Q ss_conf             799997711500003786077998999868-8899808--808----9-999689899999999999852---4754686
Q gi|254780784|r  553 VEIMAIPPDQIRNVIGMGGKVIRGIVEQTG-AKVNIDD--DGT----V-KIASSSLAEIEAAREMIRSIT---DVPEVNK  621 (699)
Q Consensus       553 ~~~~~i~~~ki~~~iG~gG~~ik~i~~~~~-~~i~i~d--~g~----v-~i~~~~~~~~~~a~~~i~~~~---~~~e~g~  621 (699)
T Consensus       550 YtHFTSPIRRY~DLi-----vHR~L~~~l~~~~~~~~~~~~~~l~~i~~~~s~~er~a~~aer~~~~~~~~~~m~~~vg~  624 (706)
T COG0557         550 YTHFTSPIRRYPDLI-----VHRQLKALLSGEPIPEKKTSEEELDELAAHISSAERRAQEAERDVIDLLKAEYMKKRVGE  624 (706)
T ss_pred             HHHCCCHHHHHHHHH-----HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             221077465243799-----999999984468887453258899999885188999999988889999999999861587


Q ss_pred             EEEEEEEEEEECCEEEECCC-CCCEEEEEEECCCC-----------CCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEE
Q ss_conf             78999999941536998287-97104886631444-----------547855603259889999997868-99866687
Q gi|254780784|r  622 IYKGQVVKVMDFGAFVHFCG-ARDGLVHISQLSTE-----------RVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSM  687 (699)
Q Consensus       622 ~y~~~v~~i~~fGafve~~~-g~~gl~HiS~l~~~-----------~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSr  687 (699)
T Consensus       625 ~f~g~V~~v~~~g~~V~l~~~~ieglV~~s~L~~d~y~~~~~~~~l~~~~~~~~~~lgd~v~v~v~~v~~~~~~i~~~~  703 (706)
T COG0557         625 EFDGVVTGVTSFGFFVELPELGLEGLVHISSLPDDYYHFDERGQALVGEKSGKVYRLGDEVKVKVTSVDLDERKIDFEL  703 (706)
T ss_pred             EEEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCEEECCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEE
T ss_conf             6889999873275799962754033476355886103023011232035566542338869999998705656135885