HHsearch alignment for GI: 254780784 and conserved domain: PRK07400
>PRK07400 30S ribosomal protein S1; Reviewed.
Probab=99.71 E-value=4e-17 Score=158.00 Aligned_cols=84 Identities=32% Similarity=0.563 Sum_probs=78.1
Q ss_pred HCCCCCCCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEECC
Q ss_conf 5247546867899999994153699828797104886631444547855603259889999997868-998666873047
Q gi|254780784|r 613 ITDVPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVVD 691 (699)
Q Consensus 613 ~~~~~e~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~~ 691 (699)
T Consensus 190 ~~~~l~vG~vv~G~V~~I~~fGaFVdi-gGvdGLlHiSeiSw~rv~~p~dv~kvGd~V~vkVi~iD~e~~rIsLSiK~l~ 268 (314)
T PRK07400 190 KMNRLEVGEVVVGTVRGIKPYGAFIDI-GGVSGLLHISEISHEHIETPHSVFNVNDQMKVMIIDLDAERGRISLSTKQLE 268 (314)
T ss_pred HHHCCCCCCEEEEEEEEEECEEEEEEE-CCCEEEEEHHHCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEEEHHHCC
T ss_conf 675088998899999999640889997-8918999814616544489878267999999999997388988997766655
Q ss_pred CCCCCC
Q ss_conf 787899
Q gi|254780784|r 692 QNTGKP 697 (699)
Q Consensus 692 ~~~~~~ 697 (699)
T Consensus 269 ~dPwd~ 274 (314)
T PRK07400 269 PEPGDM 274 (314)
T ss_pred CCCHHH
T ss_conf 584777