HHsearch alignment for GI: 254780784 and conserved domain: PRK07400

>PRK07400 30S ribosomal protein S1; Reviewed.
Probab=99.71  E-value=4e-17  Score=158.00  Aligned_cols=84  Identities=32%  Similarity=0.563  Sum_probs=78.1

Q ss_pred             HCCCCCCCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEECC
Q ss_conf             5247546867899999994153699828797104886631444547855603259889999997868-998666873047
Q gi|254780784|r  613 ITDVPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVVD  691 (699)
Q Consensus       613 ~~~~~e~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~~  691 (699)
T Consensus       190 ~~~~l~vG~vv~G~V~~I~~fGaFVdi-gGvdGLlHiSeiSw~rv~~p~dv~kvGd~V~vkVi~iD~e~~rIsLSiK~l~  268 (314)
T PRK07400        190 KMNRLEVGEVVVGTVRGIKPYGAFIDI-GGVSGLLHISEISHEHIETPHSVFNVNDQMKVMIIDLDAERGRISLSTKQLE  268 (314)
T ss_pred             HHHCCCCCCEEEEEEEEEECEEEEEEE-CCCEEEEEHHHCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEEEHHHCC
T ss_conf             675088998899999999640889997-8918999814616544489878267999999999997388988997766655


Q ss_pred             CCCCCC
Q ss_conf             787899
Q gi|254780784|r  692 QNTGKP  697 (699)
Q Consensus       692 ~~~~~~  697 (699)
T Consensus       269 ~dPwd~  274 (314)
T PRK07400        269 PEPGDM  274 (314)
T ss_pred             CCCHHH
T ss_conf             584777