HHsearch alignment for GI: 254780784 and conserved domain: PRK09521

>PRK09521 exosome complex RNA-binding protein Csl4; Provisional.
Probab=97.19  E-value=0.002  Score=46.55  Aligned_cols=73  Identities=34%  Similarity=0.417  Sum_probs=64.1

Q ss_pred             CCCCCCCEEEEEEEEEEECCEEEECCC-----------CCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEEEEECCCCCE
Q ss_conf             475468678999999941536998287-----------971048866314445478556032598899999978689986
Q gi|254780784|r  615 DVPEVNKIYKGQVVKVMDFGAFVHFCG-----------ARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDDRGKI  683 (699)
Q Consensus       615 ~~~e~g~~y~~~v~~i~~fGafve~~~-----------g~~gl~HiS~l~~~~v~~~~d~~~~Gd~i~vk~~~~d~~g~i  683 (699)
T Consensus        60 ~~p~vGdiVig~V~~v~~~~a~v~I~~v~g~~~~~l~~~~~g~i~i~~v~~~~~~~~~d~fr~gDIVrAkVis~~~--~~  137 (187)
T PRK09521         60 PLLKKGDIVYGRVVDVKEQRALVRIVSIEGRGNRELATSKLGGIHISQVSDGYVEDLTDAFKIGDIVRAKVISTTD--PI  137 (187)
T ss_pred             CCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCC--CE
T ss_conf             7889899999999995476799999998686886256544888885437866745267524878689999973598--46


Q ss_pred             EEEEEE
Q ss_conf             668730
Q gi|254780784|r  684 KLSMKV  689 (699)
Q Consensus       684 ~lSrk~  689 (699)
T Consensus       138 ~Lst~~  143 (187)
T PRK09521        138 QLSTKG  143 (187)
T ss_pred             EEEECC
T ss_conf             999538