HHsearch alignment for GI: 254780784 and conserved domain: PRK13763
>PRK13763 putative RNA-processing protein; Provisional.
Probab=97.81 E-value=0.00014 Score=55.88 Aligned_cols=84 Identities=31% Similarity=0.547 Sum_probs=66.9
Q ss_pred CEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCEEEEE-CCEEEEEEEC--CHHHHHHHHHHHHHHCCC--CC-----CC
Q ss_conf 75799997711500003786077998999868889980-8808999968--989999999999985247--54-----68
Q gi|254780784|r 551 PRVEIMAIPPDQIRNVIGMGGKVIRGIVEQTGAKVNID-DDGTVKIASS--SLAEIEAAREMIRSITDV--PE-----VN 620 (699)
Q Consensus 551 p~~~~~~i~~~ki~~~iG~gG~~ik~i~~~~~~~i~i~-d~g~v~i~~~--~~~~~~~a~~~i~~~~~~--~e-----~g 620 (699)
T Consensus 3 ~~~~~v~IP~~Ri~~Lig~~g~~~~~Iee~~~~~i~idsk~g~V~i~~~~~dp~~~~Ka~d~i~Ai~rGF~~e~A~~Ll~ 82 (185)
T PRK13763 3 RMTEYVKIPKDRIGVLIGKKGETKKEIEEKTGVKLEIDSETGEVIIEPTEEDPLAVMKARDIVKAIGRGFSPEKALKLLD 82 (185)
T ss_pred CCEEEEECCCHHEEEEECCCCCCHHHHHHHHCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf 61256417805456455788563789999979779995899759998289998999989999999984899999999846
Q ss_pred CEEEEEEEEEEECC
Q ss_conf 67899999994153
Q gi|254780784|r 621 KIYKGQVVKVMDFG 634 (699)
Q Consensus 621 ~~y~~~v~~i~~fG 634 (699)
T Consensus 83 dd~~leiidi~~~~ 96 (185)
T PRK13763 83 DDYVLEVIDLSEYG 96 (185)
T ss_pred CCCEEEEEEHHHHC
T ss_conf 68369999988823