HHsearch alignment for GI: 254780784 and conserved domain: PRK13806
>PRK13806 rpsA 30S ribosomal protein S1; Provisional.
Probab=99.69 E-value=2.1e-16 Score=152.10 Aligned_cols=81 Identities=40% Similarity=0.634 Sum_probs=73.5
Q ss_pred CCCCCCCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCC-CCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEECC
Q ss_conf 24754686789999999415369982879710488663144-4547855603259889999997868-998666873047
Q gi|254780784|r 614 TDVPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLST-ERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVVD 691 (699)
Q Consensus 614 ~~~~e~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~-~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~~ 691 (699)
T Consensus 286 ~~k~~vG~~v~g~V~~i~~fGaFVel~~gieGlvHiSelSw~~~~~~p~~~~~~Gd~v~vkIl~iD~e~rrisLs~Kq~~ 365 (489)
T PRK13806 286 GDRLEADQVVEGKVVRLAPFGAFVEVLPGVEGLVHISEMSWTRRVNKPEEVVAPGDTVSVKIKELDPAKRRISLSLRDAE 365 (489)
T ss_pred HHHCCCCCEEEEEEEECCCCCEEEEECCCEEEEEEEHHCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEEEHHHCC
T ss_conf 86367998379999972454069996388079998044255345789899606687299999997143378996567534
Q ss_pred CCC
Q ss_conf 787
Q gi|254780784|r 692 QNT 694 (699)
Q Consensus 692 ~~~ 694 (699)
T Consensus 366 ~nP 368 (489)
T PRK13806 366 GDP 368 (489)
T ss_pred CCC
T ss_conf 695