HHsearch alignment for GI: 254780784 and conserved domain: PTZ00162

>PTZ00162 RNA polymerase II subunit 7; Provisional.
Probab=97.68  E-value=9.3e-05  Score=57.37  Aligned_cols=68  Identities=16%  Similarity=0.172  Sum_probs=55.9

Q ss_pred             HHHCCCCCCCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCCCCC----------CCHHHHCCCCCEEEEEEEEECC
Q ss_conf             98524754686789999999415369982879710488663144454----------7855603259889999997868
Q gi|254780784|r  611 RSITDVPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERV----------AKTSDVVKEGDTVWVKLLDFDD  679 (699)
Q Consensus       611 ~~~~~~~e~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~~~v----------~~~~d~~~~Gd~i~vk~~~~d~  679 (699)
T Consensus        73 ~aivfkP~~~EVvdg~V~~v~~~G~fv~~GPl-~~fv~~s~i~~d~~yd~~~~~~~~~~~~~~i~kgd~VR~rIvg~~~  150 (170)
T PTZ00162         73 QAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPL-KIFVSRTAIPPNFVYDSDSAYPCFSDGTISIKPQSEVRLRLQGIRY  150 (170)
T ss_pred             EEEEEECCCCCEEEEEEEEEECCEEEEEECCE-EEEEEHHHCCCCCEECCCCCCCEECCCCCEECCCCEEEEEEEEEEE
T ss_conf             99999336798999999999640799991280-8998989999864897899860482788388889999999999873