RPSBLAST alignment for GI: 254780784 and conserved domain: TIGR02065

>gnl|CDD|131120 TIGR02065, ECX1, archaeal exosome-like complex exonuclease 1. This family contains the archaeal protein orthologous to the eukaryotic exosome protein Rrp41. It is somewhat more distantly related to the bacterial protein ribonuclease PH. An exosome-like complex has been demonstrated experimentally for the Archaea in Sulfolobus solfataricus, so members of this family are designated exosome complex exonuclease 1, after usage in SwissProt. Length = 230

 Score = 54.4 bits (131), Expect = 1e-07
 Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 17/165 (10%)

Query: 14  RPLKLETGRIARQSDGAVLATYGETVVLATV-----VYDRSLKDGQDFFPLTVNYQERTY 68
           RP+K+E G + + +DG+    +G T ++A V     ++ R L+   D   L V Y    +
Sbjct: 19  RPIKIEAG-VLKNADGSAYVEFGGTKIIAAVYGPREMHPRHLQL-PDRAVLRVRYHMAPF 76

Query: 69  AVGKIPGGYLRRESRPTENEILISRMIDRSIRP--LFSKCYKNETQVIINVMQHDLESSP 126
           +  +      R+   P+  EI IS++I  ++ P  L  +  +    V I V+Q D  +  
Sbjct: 77  STDE------RKRPGPSRREIEISKVIREALEPAILLEQFPRTAIDVFIEVLQAD--AGT 128

Query: 127 HVVSMVAASAALMLSGLPFEGPVVGAQVDYINGQYVLNPRLDEDQ 171
               + AAS AL  +G+P    VVG  V  ++G  VL+   +ED 
Sbjct: 129 RCAGLTAASLALADAGIPMRDLVVGVAVGKVDGVVVLDLNEEEDM 173