RPSBLAST alignment for GI: 254780784 and conserved domain: pfam03725
>gnl|CDD|146389 pfam03725, RNase_PH_C, 3' exoribonuclease family, domain 2. This family includes 3'-5' exoribonucleases. Ribonuclease PH contains a single copy of this domain, and removes nucleotide residues following the -CCA terminus of tRNA. Polyribonucleotide nucleotidyltransferase (PNPase) contains two tandem copies of the domain. PNPase is involved in mRNA degradation in a 3'-5' direction. The exosome is a 3'-5' exoribonuclease complex that is required for 3' processing of the 5.8S rRNA. Three of its five protein components contain a copy of this domain. A hypothetical protein from S. pombe appears to belong to an uncharacterized subfamily. This subfamily is found in both eukaryotes and archaebacteria. Length = 67
Score = 51.4 bits (124), Expect = 8e-07
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 147 GPVVGAQVDYINGQYVLNPRLDED---QGSLDLFVSGTQDAVLMVELEANQLSEDVVLDA 203
GPV V I+G+ VL+P L+E+ L + V+GT D V +++ L+E+ +L+A
Sbjct: 1 GPVAAVTVGKIDGELVLDPTLEEESLADSDLTIVVAGTGDIVALMKEGGGGLTEEELLEA 60
Query: 204 IIFGH 208
+ H
Sbjct: 61 LELAH 65