RPSBLAST alignment for GI: 254780784 and conserved domain: PRK03983
>gnl|CDD|179695 PRK03983, PRK03983, exosome complex exonuclease Rrp41; Provisional. Length = 244
Score = 109 bits (274), Expect = 3e-24
Identities = 76/245 (31%), Positives = 122/245 (49%), Gaps = 15/245 (6%)
Query: 307 MLDKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTREDEQYVDSL 366
+L+ +R+DGR + +R I +VG+L+ GS+ G+ + I V G RE + L
Sbjct: 9 ILEDGLRLDGRKPDELRPIKIEVGVLKNADGSAYLEWGNNKIIAAV-YGPRE--MHPRHL 65
Query: 367 SGTQRNDFMMHYNFLPCATGEVSRMGAPSRREIGHGRLARRAIHPVLPQTAQFPYT-LRI 425
R + YN P + E R G P RR I ++ R A+ P + FP T + +
Sbjct: 66 QLPDRAVLRVRYNMAPFSVDERKRPG-PDRRSIEISKVIREALEPAI-MLELFPRTVIDV 123
Query: 426 VSEITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDEDH 485
E+ ++D + +A + +SLAL DAG+P+ VAG A+G V D I+L D++ +ED+
Sbjct: 124 FIEVLQADAGTRVAGITAASLALADAGIPMRDLVAGCAVGKV---DGVIVL-DLNKEEDN 179
Query: 486 LGHMDFKVAGTDSG--ITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLSESR 543
G D VA IT +Q+D G ++ + AL+ AK+G I + L
Sbjct: 180 YGEADMPVAIMPRLGEITLLQLD---GNLTREEFLEALELAKKGIKRIYQLQREALKSKY 236
Query: 544 LQLGE 548
++ E
Sbjct: 237 GEIAE 241