RPSBLAST alignment for GI: 254780784 and conserved domain: PRK03983

>gnl|CDD|179695 PRK03983, PRK03983, exosome complex exonuclease Rrp41; Provisional. Length = 244
 Score =  109 bits (274), Expect = 3e-24
 Identities = 76/245 (31%), Positives = 122/245 (49%), Gaps = 15/245 (6%)

Query: 307 MLDKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTREDEQYVDSL 366
           +L+  +R+DGR  + +R I  +VG+L+   GS+    G+ + I  V  G RE   +   L
Sbjct: 9   ILEDGLRLDGRKPDELRPIKIEVGVLKNADGSAYLEWGNNKIIAAV-YGPRE--MHPRHL 65

Query: 367 SGTQRNDFMMHYNFLPCATGEVSRMGAPSRREIGHGRLARRAIHPVLPQTAQFPYT-LRI 425
               R    + YN  P +  E  R G P RR I   ++ R A+ P +     FP T + +
Sbjct: 66  QLPDRAVLRVRYNMAPFSVDERKRPG-PDRRSIEISKVIREALEPAI-MLELFPRTVIDV 123

Query: 426 VSEITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDEDH 485
             E+ ++D  + +A +  +SLAL DAG+P+   VAG A+G V   D  I+L D++ +ED+
Sbjct: 124 FIEVLQADAGTRVAGITAASLALADAGIPMRDLVAGCAVGKV---DGVIVL-DLNKEEDN 179

Query: 486 LGHMDFKVAGTDSG--ITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLSESR 543
            G  D  VA       IT +Q+D   G ++    + AL+ AK+G   I     + L    
Sbjct: 180 YGEADMPVAIMPRLGEITLLQLD---GNLTREEFLEALELAKKGIKRIYQLQREALKSKY 236

Query: 544 LQLGE 548
            ++ E
Sbjct: 237 GEIAE 241